Psyllid ID: psy12639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
Protein Sequence
MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVKVELNEFDLD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEcccccccccccccccEccccHHHHEEEEcHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcccccccccccEccccHHHHHHHHccccccEccccccccc
Coil and Loop (DISEMBL)
meshlmlhtgakpyactecdqkfnrnsklKIHYNLAhctgemyecchcarsfpcksyliphlrvhtgekpyacnlctvRYLRSYELVLHLKKChredarnpyapafvdvNTVAQVKQEYEelpvkvelnefdld
Flexible Loop (DISEMBL)
meshlmlhtgakpyactECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEyeelpvkvelnefdld
Low Complexity Region (SEG)
MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVKVELNEFDLD
Disordered region (IsUnstruct)
*******HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVK*********
Disordered Region (DISOPRED)
MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVKVELNEFDL*
Disordered Region (DISEMBL)
********TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVKVELNEFDLD
Disordered Region (DISPRO)
MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVKVELNEFDL*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEYEELPVKVELNEFDLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	134	2.2.26 [Sep-21-2011]
Q5R670	563	Zinc finger protein with	yes	N/A	0.776	0.184	0.424	5e-17
Q4KLI1	562	Zinc finger protein with	yes	N/A	0.776	0.185	0.424	6e-17
Q6NX49	715	Zinc finger protein 544 O	yes	N/A	0.738	0.138	0.405	7e-17
Q8BGS3	561	Zinc finger protein with	no	N/A	0.776	0.185	0.405	8e-17
O95201	554	Zinc finger protein 205 O	no	N/A	0.641	0.155	0.471	9e-17
Q58DK7	550	Zinc finger protein 205 O	no	N/A	0.641	0.156	0.471	1e-16
P17029	563	Zinc finger protein with	no	N/A	0.768	0.182	0.409	1e-16
Q86W11	494	Zinc finger and SCAN doma	no	N/A	0.686	0.186	0.457	1e-16
P10754	512	Zinc finger protein 13 OS	no	N/A	0.641	0.167	0.459	1e-16
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.641	0.127	0.449	1e-16

>sp|Q5R670|ZKSC1_PONAB Zinc finger protein with KRAB and SCAN domains 1 OS=Pongo abelii GN=ZKSCAN1 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H  +H+G KPY C EC + F+++S L  H  + H   + YEC  C ++F   SYLI H R
Sbjct: 451 HQRIHSGEKPYECNECGKAFSQSSDLTKHQRI-HTGEKPYECSECGKAFNRNSYLILHRR 509

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDV 109
           +HT EKPY C  C   + RS  L LH +   RE A + Y+PA +D 
Sbjct: 510 IHTREKPYKCTKCGKAFTRSSTLTLHHRIHARERA-SEYSPASLDA 554

May be involved in transcriptional regulation.
Pongo abelii (taxid: 9601)

>sp|Q4KLI1|ZKSC1_RAT Zinc finger protein with KRAB and SCAN domains 1 OS=Rattus norvegicus GN=Zkscan1 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H  +H+G KPY C EC + F+++S L  H  + H   + YEC  C ++F   SYLI H R
Sbjct: 450 HQRIHSGEKPYECNECGKAFSQSSDLTKHQRI-HTGEKPYECSECGKAFNRNSYLILHRR 508

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDV 109
           +HT EKPY C  C   + RS  L LH +   RE A + Y+PA +D 
Sbjct: 509 IHTREKPYKCTKCGKAFTRSSTLTLHHRIHARERA-SEYSPASLDT 553

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

>sp|Q6NX49|ZN544_HUMAN Zinc finger protein 544 OS=Homo sapiens GN=ZNF544 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 12/111 (10%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
           +H  +HTG KPY C EC + F  NS L IH  + H   + Y+C HC +SF     L+ H 
Sbjct: 537 THQRIHTGEKPYQCIECGKSFRWNSNLVIHQRI-HTGEKPYDCTHCGKSFSQSYQLVAHK 595

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLHLK-----------KCHREDARNPY 102
           R HTGEKPY CN C   + RS +L+ HL+           +C++  AR+ Y
Sbjct: 596 RTHTGEKPYECNECGKAFNRSTQLIRHLQIHTGEKPYKCNQCNKAFARSSY 646

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BGS3|ZKSC1_MOUSE Zinc finger protein with KRAB and SCAN domains 1 OS=Mus musculus GN=Zkscan1 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 2/106 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H  +H+G KPY C EC + F+++S L  H  + H   + YEC  C ++F   SYLI H R
Sbjct: 449 HQRIHSGEKPYECNECGKAFSQSSDLTKHQRI-HTGEKPYECSECGKAFNRNSYLILHRR 507

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDV 109
           +HT EKPY C  C   + RS  L LH  + H  +  + Y+PA +D 
Sbjct: 508 IHTREKPYKCTKCGKAFTRSSTLTLH-HRIHARERTSEYSPASLDA 552

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|O95201|ZN205_HUMAN Zinc finger protein 205 OS=Homo sapiens GN=ZNF205 PE=1 SV=2

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
           +H   HTG KPYACT+C ++F R+S L I + + H   + Y C  C +SF   S LI H 
Sbjct: 325 THRRTHTGEKPYACTDCGKRFGRSSHL-IQHQIIHTGEKPYTCPACRKSFSHHSTLIQHQ 383

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLH 89
           R+HTGEKPY C+ C  R+ R  +LV H
Sbjct: 384 RIHTGEKPYVCDRCAKRFTRRSDLVTH 410

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q58DK7|ZN205_BOVIN Zinc finger protein 205 OS=Bos taurus GN=ZNF205 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
           +H   HTG KPYACT+C ++F R+S L I + + H   + Y C  C +SF   S LI H 
Sbjct: 323 THRRTHTGEKPYACTDCGKRFGRSSHL-IQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQ 381

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLH 89
           R+HTGEKPY C+ C  R+ R  +LV H
Sbjct: 382 RIHTGEKPYVCDRCAKRFTRRSDLVTH 408

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|P17029|ZKSC1_HUMAN Zinc finger protein with KRAB and SCAN domains 1 OS=Homo sapiens GN=ZKSCAN1 PE=1 SV=3

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 2/105 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H  +H+G KPY C EC + F+++S L  H  + H   + YEC  C ++F   SYLI H R
Sbjct: 451 HQRIHSGEKPYECNECGKAFSQSSDLTKHQRI-HTGEKPYECSECGKAFNRNSYLILHRR 509

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVD 108
           +HT EKPY C  C   + RS  L LH  + H  +  + Y+PA +D
Sbjct: 510 IHTREKPYKCTKCGKAFTRSSTLTLH-HRIHARERASEYSPASLD 553

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q86W11|ZSC30_HUMAN Zinc finger and SCAN domain-containing protein 30 OS=Homo sapiens GN=ZSCAN30 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H  +HTG +PYAC EC + F+ +S L  H  + H   + YECC C ++F   S LI H R
Sbjct: 319 HQRIHTGERPYACKECGKAFSLSSDLVRHQRI-HSGEKPYECCECGKAFRGSSELIRHRR 377

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
           +HTGEKPY C  C   + RS  L+ H KK H  D
Sbjct: 378 IHTGEKPYECGECGKAFSRSSALIQH-KKIHTGD 410

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10754|ZFP13_MOUSE Zinc finger protein 13 OS=Mus musculus GN=Zfp13 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 1/87 (1%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
           +H   HTG KPY CT+C ++F R+S L I + + H   + Y C  C +SF   S LI H 
Sbjct: 283 THRRTHTGEKPYTCTDCGKRFGRSSHL-IQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQ 341

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLH 89
           R+HTGEKPY C+ C  R+ R  +LV H
Sbjct: 342 RIHTGEKPYVCDRCAKRFTRRSDLVTH 368

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
           H  +HTG KPY C EC + F+++S L IH  +   TGE  Y+C HC++SF  +S L+ H 
Sbjct: 153 HQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIH--TGEKPYQCSHCSKSFSQRSDLVKHQ 210

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLHLK 91
           R+HTGEKPY CN C   + +S +++ H +
Sbjct: 211 RIHTGEKPYTCNQCNKHFSQSSDVIKHQR 239

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
395516196	1798	PREDICTED: uncharacterized protein LOC10	0.634	0.047	0.476	9e-17
297283336	1466	PREDICTED: hypothetical protein LOC70097	0.641	0.058	0.482	1e-16
326666706	335	PREDICTED: zinc finger protein 85-like [	0.649	0.259	0.431	1e-16
321478428	865	falls into Kruppel clade in ML phylogeny	0.664	0.102	0.455	2e-16
334333685	638	PREDICTED: zinc finger protein 470-like	0.634	0.133	0.476	3e-16
326680459	288	PREDICTED: gastrula zinc finger protein	0.641	0.298	0.471	3e-16
326666769	346	PREDICTED: oocyte zinc finger protein Xl	0.649	0.251	0.443	4e-16
326666919	217	PREDICTED: zinc finger protein 681-like,	0.641	0.396	0.448	4e-16
148688931	941	mCG1029863 [Mus musculus]	0.865	0.123	0.398	5e-16
326667351	345	PREDICTED: gastrula zinc finger protein	0.641	0.249	0.448	6e-16

>gi|395516196|ref|XP_003762278.1| PREDICTED: uncharacterized protein LOC100917234 [Sarcophilus harrisii]

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 4    HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
            H  +HTG KPY C EC + F+R+S+L +H  + H   + YEC  C ++F C SYLI H R
Sbjct: 1695 HQGVHTGEKPYECQECGKTFSRSSRLIVHQRI-HTGEKPYECNECGKAFSCSSYLIVHQR 1753

Query: 64   VHTGEKPYACNLCTVRYLRSYELVLH 89
            +HTGEKPY CN C   + +S  L+ H
Sbjct: 1754 IHTGEKPYRCNECGKAFGQSSHLIFH 1779

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|297283336|ref|XP_001091860.2| PREDICTED: hypothetical protein LOC700976 [Macaca mulatta]

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
           +H   HTG KPYACT+C ++F R+S L I + + H   + Y C  C +SF   S LI H 
Sbjct: 314 THRRTHTGEKPYACTDCGKRFGRSSHL-IQHQIIHTGEKPYTCPACRKSFSHHSTLIQHQ 372

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLH 89
           R+HTGEKPY C+ CT R+ R  +LV H
Sbjct: 373 RIHTGEKPYVCDRCTKRFTRRSDLVTH 399

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666706|ref|XP_003198344.1| PREDICTED: zinc finger protein 85-like [Danio rerio]

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 1/88 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H+M+HTG KP+ CT+C + FN++S L +H  + H   + + C HC +SF C S+L  H R
Sbjct: 107 HMMIHTGKKPFTCTQCGKSFNQSSHLNLHM-MIHTGEKPFTCTHCGKSFNCSSHLNQHTR 165

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLK 91
           +HTGEKPY C  C   +++S  L  H++
Sbjct: 166 IHTGEKPYTCTQCGKSFIQSSSLNQHMR 193

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|321478428|gb|EFX89385.1| falls into Kruppel clade in ML phylogeny [Daphnia pulex]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 1   MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIP 60
           +++H   HTG KP+ C +C ++F R+  LK H  L H   + Y C HC R F   + L  
Sbjct: 510 LQNHERTHTGEKPFECKQCGKRFTRDHHLKTHMRL-HTGEKPYNCTHCDRQFVQVANLRR 568

Query: 61  HLRVHTGEKPYACNLCTVRYLRSYELVLHL 90
           HLRVHTGE+PYAC LCT R+  S +L  H+
Sbjct: 569 HLRVHTGERPYACELCTSRFSDSNQLKAHM 598

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|334333685|ref|XP_003341751.1| PREDICTED: zinc finger protein 470-like [Monodelphis domestica]

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H  +HTG KPY C EC + F+R+S+L +H  + H   + YEC  C ++F C SYLI H R
Sbjct: 535 HQGVHTGEKPYECNECGKTFSRSSRLIVHQRI-HTGEKPYECNECGKAFSCSSYLIVHQR 593

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLH 89
           +HTGEKPY CN C   + +S  L+ H
Sbjct: 594 IHTGEKPYRCNECGKAFGQSSHLIFH 619

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326680459|ref|XP_003201525.1| PREDICTED: gastrula zinc finger protein XlCGF57.1-like [Danio rerio]

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
           H+M+HTG KP+ CT+C + FN++S L +H  +   TGE  + C HC +SF C S+LI H+
Sbjct: 100 HMMIHTGKKPFTCTQCAKSFNQSSHLNLHMMIH--TGEKPFTCTHCGKSFNCSSHLIQHM 157

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLHLK 91
           R+HTGEKPYAC  C   +  S  L  H +
Sbjct: 158 RIHTGEKPYACTQCGKSFNCSTNLNQHTR 186

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666769|ref|XP_003198370.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Danio rerio]

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H+ +HTG KP+ CT+C + F R   LKIH  + H   + + C  C +SF C SYL  H+R
Sbjct: 51  HMRIHTGEKPFTCTQCGKSFGRKGHLKIHM-MIHTGEKPFTCTQCGKSFSCSSYLNLHMR 109

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHLK 91
           +HTGE+P+ CN C   + RS  L  H+K
Sbjct: 110 IHTGEQPFTCNQCGKSFNRSSTLNKHMK 137

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666919|ref|XP_003198418.1| PREDICTED: zinc finger protein 681-like, partial [Danio rerio]

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H+M+HTG KP+ACT+C + F ++S L +H  + H   + + C HC +SF C S+L  H+R
Sbjct: 113 HMMIHTGKKPFACTQCAKSFKQSSHLNLHM-MIHTGEKPFTCTHCGKSFNCSSHLNQHMR 171

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHL 90
           +HTGEKPYAC  C   + +S  L  H+
Sbjct: 172 IHTGEKPYACTQCGKSFNQSSHLNYHM 198

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148688931|gb|EDL20878.1| mCG1029863 [Mus musculus]

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 12/128 (9%)

Query: 1   MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLI 59
           ++ H  +HTG KPY C EC + F +NS+L++HY +   TGE  Y C +C +SF   S L 
Sbjct: 368 LQVHYRIHTGEKPYKCNECGKSFKQNSQLQVHYRIH--TGEKPYRCSNCGKSFTQNSQLQ 425

Query: 60  PHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTVAQVKQEY 119
            H R+HTGEKPY CN C   + +SY L +H    +R   RN       +V  VA + Q  
Sbjct: 426 VHYRIHTGEKPYKCNECGKSFTQSYRLQVH----YRIHERN-----LTNVMNVANLLQGT 476

Query: 120 EELPVKVE 127
           + L    E
Sbjct: 477 QTLKFITE 484

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667351|ref|XP_003198578.1| PREDICTED: gastrula zinc finger protein XlCGF57.1-like [Danio rerio]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
           H+M+HTG KP+ACT+C + F ++S L +H  + H   + + C HC +SF C S+L  H+R
Sbjct: 107 HMMIHTGKKPFACTQCAKSFKQSSHLNLHM-MIHTGEKPFTCTHCGKSFNCSSHLNQHMR 165

Query: 64  VHTGEKPYACNLCTVRYLRSYELVLHL 90
           +HTGEKPYAC  C   + +S  L  H+
Sbjct: 166 IHTGEKPYACTQCGKSFNQSSHLNYHM 192

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
ZFIN|ZDB-GENE-110914-34	322	si:dkey-149m13.4 "si:dkey-149m	0.641	0.267	0.471	8e-21
ZFIN|ZDB-GENE-110914-22	340	si:dkey-269o24.6 "si:dkey-269o	0.656	0.258	0.461	1e-20
ZFIN|ZDB-GENE-110914-33	350	si:ch211-161m3.1 "si:ch211-161	0.634	0.242	0.477	2.7e-20
ZFIN|ZDB-GENE-080215-12	600	zgc:173710 "zgc:173710" [Danio	0.641	0.143	0.471	6.4e-20
ZFIN|ZDB-GENE-110913-180	339	si:ch73-266f23.1 "si:ch73-266f	0.701	0.277	0.458	1.2e-19
UNIPROTKB|F1M5S6	308	F1M5S6 "Uncharacterized protei	0.686	0.298	0.457	1.9e-19
ZFIN|ZDB-GENE-110914-134	218	si:ch211-208f21.2 "si:ch211-20	0.686	0.422	0.437	1.9e-19
UNIPROTKB|B3KRF7	350	ZKSCAN1 "Zinc finger protein w	0.761	0.291	0.433	2e-19
ZFIN|ZDB-GENE-080305-5	320	zgc:174275 "zgc:174275" [Danio	0.664	0.278	0.434	3.1e-19
ZFIN|ZDB-GENE-080219-37	339	zgc:171604 "zgc:171604" [Danio	0.708	0.280	0.443	3.1e-19

ZFIN|ZDB-GENE-110914-34 si:dkey-149m13.4 "si:dkey-149m13.4" [Danio rerio (taxid:7955)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 42/89 (47%), Positives = 59/89 (66%)

Query:     4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
             H+M+HTG KP+ CT+C + FN++S L +H  + H TGE  + C HC +SF C S+LI H 
Sbjct:   140 HMMIHTGKKPFTCTQCAKSFNQSSHLNLHM-MIH-TGEKPFTCTHCGKSFNCSSHLIQHT 197

Query:    63 RVHTGEKPYACNLCTVRYLRSYELVLHLK 91
             R+HTGEKP+ C  C   +  S  L LH++
Sbjct:   198 RIHTGEKPFTCTQCGKSFSHSSHLNLHMR 226

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-22 si:dkey-269o24.6 "si:dkey-269o24.6" [Danio rerio (taxid:7955)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 42/91 (46%), Positives = 60/91 (65%)

Query:     1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLI 59
             +  H+M+HTG KP+ CT+C + FN++S L +H  + H TGE  + C HC +SF C S+L 
Sbjct:   109 LNKHMMIHTGEKPFTCTQCAKSFNQSSHLNLHM-MIH-TGEKPFTCTHCGKSFNCSSHLN 166

Query:    60 PHLRVHTGEKPYACNLCTVRYLRSYELVLHL 90
              H+R+HTGEKPYAC  C   + +S  L  H+
Sbjct:   167 QHMRIHTGEKPYACTQCGKSFNQSSHLNYHM 197

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-33 si:ch211-161m3.1 "si:ch211-161m3.1" [Danio rerio (taxid:7955)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 42/88 (47%), Positives = 59/88 (67%)

Query:     4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
             H+M+HTG KP+ACT+C + F ++S L +H  + H TGE  + C HC +SF C S+L  H+
Sbjct:   112 HMMIHTGKKPFACTQCAKSFKQSSHLNLHM-MIH-TGEKPFTCTHCGKSFNCSSHLNQHM 169

Query:    63 RVHTGEKPYACNLCTVRYLRSYELVLHL 90
             R+HTGEKPYAC  C   + +S  L  H+
Sbjct:   170 RIHTGEKPYACTQCGKSFNQSSHLNYHM 197

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080215-12 zgc:173710 "zgc:173710" [Danio rerio (taxid:7955)]

 Score = 245 (91.3 bits), Expect = 6.4e-20, P = 6.4e-20
 Identities = 42/89 (47%), Positives = 59/89 (66%)

Query:     4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
             H+M+HTG KP+ CT+C + FN++S L +H  + H TGE  + C HC +SF C S+LI H 
Sbjct:    53 HMMIHTGKKPFTCTQCAKSFNQSSHLNLHM-MIH-TGEKPFTCTHCGKSFNCSSHLIQHT 110

Query:    63 RVHTGEKPYACNLCTVRYLRSYELVLHLK 91
             R+HTGEKP+ C  C   +  S  L LH++
Sbjct:   111 RIHTGEKPFTCTQCGKSFSHSSHLNLHMR 139

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110913-180 si:ch73-266f23.1 "si:ch73-266f23.1" [Danio rerio (taxid:7955)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/96 (45%), Positives = 57/96 (59%)

Query:     2 ESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPH 61
             E H  +HTG KP+AC  C ++FN+ S LK+H  + H     Y C  C +SF CKS L  H
Sbjct:   215 EMHKKIHTGEKPFACQHCGKRFNKMSNLKVHIRV-HSGERPYTCQQCGKSFACKSALSFH 273

Query:    62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
             +  HTGEKP+ C+ C  RY+   EL  H KK H +D
Sbjct:   274 IMRHTGEKPFTCDQCEKRYVCKRELNRH-KKIHAKD 308

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1M5S6 F1M5S6 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 43/94 (45%), Positives = 57/94 (60%)

Query:     1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIP 60
             + SH  +HTG +PY C+EC + F++NS L  H  + H   + YEC  C ++F   SYLI 
Sbjct:   216 LTSHQRIHTGERPYKCSECGKAFSQNSTLFQH-QIIHAGVKPYECSECGKAFSRSSYLIE 274

Query:    61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
             H R+HTGEKPY CN C   + RS  L  H +K H
Sbjct:   275 HQRIHTGEKPYRCNACGKAFNRSSRLTQH-QKIH 307

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-110914-134 si:ch211-208f21.2 "si:ch211-208f21.2" [Danio rerio (taxid:7955)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 42/96 (43%), Positives = 60/96 (62%)

Query:     3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH 61
             +H+M+HTG KP+ CT+C + FNR+S L  H  + H TGE  Y C  C +SF C S+L  H
Sbjct:   112 NHMMIHTGEKPFKCTQCGKSFNRSSDLHQHMRI-H-TGEKPYTCTQCGKSFYCSSHLHQH 169

Query:    62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
             +R+HTGEKP+ C  C   + +S     H++  H E+
Sbjct:   170 MRIHTGEKPFTCTQCGKSFSQSSHFKQHMR-IHTEE 204

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|B3KRF7 ZKSCAN1 "Zinc finger protein with KRAB and SCAN domains 1" [Homo sapiens (taxid:9606)]

 Score = 232 (86.7 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 46/106 (43%), Positives = 62/106 (58%)

Query:     4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
             H  +H+G KPY C EC + F+++S L  H  + H TGE  YEC  C ++F   SYLI H 
Sbjct:   238 HQRIHSGEKPYECNECGKAFSQSSDLTKHQRI-H-TGEKPYECSECGKAFNRNSYLILHR 295

Query:    63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVD 108
             R+HT EKPY C  C   + RS  L LH  + H  +  + Y+PA +D
Sbjct:   296 RIHTREKPYKCTKCGKAFTRSSTLTLH-HRIHARERASEYSPASLD 340

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

ZFIN|ZDB-GENE-080305-5 zgc:174275 "zgc:174275" [Danio rerio (taxid:7955)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query:     1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGE-MYECCHCARSFPCKSYLI 59
             +  H+ +HTG KP+ACT+C + F R+S L  H  + H TGE ++ C  C +SF C S+L 
Sbjct:   192 LNRHMRIHTGEKPFACTQCGKSFLRSSHLNRHMRI-H-TGERLFTCTQCWKSFTCSSHLY 249

Query:    60 PHLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
              H+R+HTGEKP+ C  C   ++RS  L  H++
Sbjct:   250 RHMRIHTGEKPFTCTQCEKSFIRSSHLNRHMR 281

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-080219-37 zgc:171604 "zgc:171604" [Danio rerio (taxid:7955)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 43/97 (44%), Positives = 58/97 (59%)

Query:     1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIP 60
             +E H  +HTG KP+AC  C ++F++ S LK+H  + H     Y C  C +SF CKS L  
Sbjct:   214 LEIHKKIHTGEKPFACQHCGKRFSQMSNLKVHIRV-HFGERPYTCQQCGKSFACKSTLSV 272

Query:    61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
             H+  HTGEKP+ C+ C  RY+   EL  H KK H +D
Sbjct:   273 HIMHHTGEKPFTCDQCEKRYVCKRELNRH-KKIHAKD 308

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	134
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.003

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 12/87 (13%)

Query: 10  GAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTG 67
             KPY C    C++K+   + LK H    H   +++E                       
Sbjct: 346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHE----------NPSPEKMNIFSAK 395

Query: 68  EKPYACNLCTVRYLRSYELVLHLKKCH 94
           +KPY C +C  RY     L  H K  H
Sbjct: 396 DKPYRCEVCDKRYKNLNGLKYHRKHSH 422

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	134
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.89
KOG3576|consensus	267		99.71
KOG3623|consensus	1007		99.67
KOG1074|consensus	958		99.67
KOG1074|consensus	958		99.65
KOG3576|consensus	267		99.6
KOG3623|consensus	1007		99.59
KOG3608|consensus	467		99.56
KOG3608|consensus	467		99.45
PHA00733	128	hypothetical protein	99.42
PHA02768	55	hypothetical protein; Provisional	99.1
PLN03086	567	PRLI-interacting factor K; Provisional	99.07
PLN03086	567	PRLI-interacting factor K; Provisional	99.04
PHA00733	128	hypothetical protein	98.99
PHA02768	55	hypothetical protein; Provisional	98.97
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.91
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.89
PHA00616	44	hypothetical protein	98.81
KOG3993|consensus	500		98.69
PHA00616	44	hypothetical protein	98.58
PHA00732	79	hypothetical protein	98.49
PHA00732	79	hypothetical protein	98.49
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.48
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.37
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.29
KOG3993|consensus	500		98.24
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.17
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.16
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.12
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.99
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.97
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.79
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.79
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.71
smart00355	26	ZnF_C2H2 zinc finger.	97.55
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.28
smart00355	26	ZnF_C2H2 zinc finger.	97.1
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.03
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.02
PRK04860	160	hypothetical protein; Provisional	96.97
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.96
KOG4173|consensus	253		96.76
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.73
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.69
PRK04860	160	hypothetical protein; Provisional	96.66
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.61
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.25
COG4049	65	Uncharacterized protein containing archaeal-type C	95.85
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.53
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.32
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	95.05
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.01
KOG1146|consensus	1406		94.86
KOG1146|consensus	1406		94.01
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.44
COG4049	65	Uncharacterized protein containing archaeal-type C	93.37
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	93.05
COG5048	467	FOG: Zn-finger [General function prediction only]	92.98
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	92.69
KOG2231|consensus	669		92.62
COG5048	467	FOG: Zn-finger [General function prediction only]	92.61
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	92.06
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	91.71
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	91.29
COG1592	166	Rubrerythrin [Energy production and conversion]	91.07
KOG2893|consensus	341		91.04
KOG2186|consensus	276		90.93
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	90.86
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.27
smart00531	147	TFIIE Transcription initiation factor IIE.	89.69
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	89.54
PRK06266	178	transcription initiation factor E subunit alpha; V	89.5
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.5
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	88.93
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	88.34
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.73
PRK06266	178	transcription initiation factor E subunit alpha; V	87.43
KOG2482|consensus	423		87.2
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.31
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.24
PHA00626	59	hypothetical protein	85.8
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	85.47
COG5236	493	Uncharacterized conserved protein, contains RING Z	85.25
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	85.19
KOG2893|consensus	341		84.44
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.15
KOG2186|consensus	276		83.95
KOG2785|consensus	390		83.85
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	83.49
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	83.46
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	83.01
KOG2231|consensus	669		82.8
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	82.54
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	81.14
COG0068	750	HypF Hydrogenase maturation factor [Posttranslatio	80.12

>KOG2462|consensus

Probab=99.93  E-value=1e-26  Score=148.32  Aligned_cols=115  Identities=23%  Similarity=0.460  Sum_probs=105.3

Q ss_pred             ChhHhhhccC---CCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639          1 MESHLMLHTG---AKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus         1 l~~h~~~h~~---~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      |.+|.++|..   .+-+.|+.|++.|.+...|..|+++ |+  .++.|.+||+.|...=.|+.|+|+|+|+|||.|+.|+
T Consensus       146 LsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirT-H~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~  222 (279)
T KOG2462|consen  146 LSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRT-HT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCG  222 (279)
T ss_pred             cchhhcccccccccccccCCCCCceeeehHHHhhHhhc-cC--CCcccccccccccchHHhhcccccccCCCCccCCccc
Confidence            5677777763   4668999999999999999999997 76  4789999999999999999999999999999999999


Q ss_pred             hhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhhhhhh
Q psy12639         78 VRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQVKQE  118 (134)
Q Consensus        78 ~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  118 (134)
                      |+|..+++|+.|+++|.+.+.|.|.  ++.|....-|.+|...
T Consensus       223 kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  223 KAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             chhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999999999  8899999999998754

>KOG2462|consensus

Probab=99.89  E-value=9.3e-24  Score=134.91  Aligned_cols=89  Identities=27%  Similarity=0.512  Sum_probs=84.4

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhh
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRY   80 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f   80 (134)
                      |+-|+++|.  -+++|.+||+.|...=-|+-|+++ |+|++||.|+.|++.|..+++|..|+++|.+.++|+|..|+|.|
T Consensus       177 LkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRT-HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsF  253 (279)
T KOG2462|consen  177 LKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRT-HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSF  253 (279)
T ss_pred             HhhHhhccC--CCcccccccccccchHHhhccccc-ccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHH
Confidence            567888886  589999999999999999999998 99999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHh
Q psy12639         81 LRSYELVLHLKK   92 (134)
Q Consensus        81 ~~~~~l~~H~~~   92 (134)
                      ...+-|.+|...
T Consensus       254 sl~SyLnKH~ES  265 (279)
T KOG2462|consen  254 ALKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHHhhhh
Confidence            999999999875

>KOG3576|consensus

Probab=99.71  E-value=2.8e-18  Score=105.70  Aligned_cols=100  Identities=27%  Similarity=0.496  Sum_probs=88.3

Q ss_pred             CCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHH
Q psy12639         10 GAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH   89 (134)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H   89 (134)
                      +...|.|.+|++.|....-|.+|++- |...+.+.|..||++|...-.|.+|+++|+|.+||.|..|+++|+++-.|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kc-h~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKC-HSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhh-ccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            34559999999999999999999997 88888999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcC-----------CCCCCCCCCCcccch
Q psy12639         90 LKKCHR-----------EDARNPYAPAFVDVN  110 (134)
Q Consensus        90 ~~~~~~-----------~~~~~~~~~~~~~~~  110 (134)
                      ++.-|+           ++.|.|..+++.+..
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~  224 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSER  224 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCC
Confidence            986553           466778866665543

>KOG3623|consensus

Probab=99.67  E-value=1.3e-17  Score=118.70  Aligned_cols=80  Identities=35%  Similarity=0.718  Sum_probs=76.6

Q ss_pred             CCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHH
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHL   90 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   90 (134)
                      ..+|.|..|++.|.-.++|.+|..- |+|++||.|.+|.+.|..+-.|..|.|.|.|+|||+|+.|+|.|+.+....+||
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYE-HsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYE-HSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhh-hcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            4679999999999999999999875 999999999999999999999999999999999999999999999999999998


Q ss_pred             H
Q psy12639         91 K   91 (134)
Q Consensus        91 ~   91 (134)
                      -
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            5

>KOG1074|consensus

Probab=99.67  E-value=1.4e-17  Score=119.84  Aligned_cols=77  Identities=26%  Similarity=0.458  Sum_probs=63.2

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC----CCCCCC-----CCCcccchhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE----DARNPY-----APAFVDVNTV  112 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~~~-----~~~~~~~~~~  112 (134)
                      |..|.+|.+...-.+.|+.|.++|+|++||+|.+||++|+++.+|+.|+-.|...    ..++|+     .+.|.....+
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            4689999999999999999999999999999999999999999999999988654    334555     4456666666


Q ss_pred             hhhhhh
Q psy12639        113 AQVKQE  118 (134)
Q Consensus       113 ~~~~~~  118 (134)
                      ..|+..
T Consensus       685 pQhIri  690 (958)
T KOG1074|consen  685 PQHIRI  690 (958)
T ss_pred             cceEEe
Confidence            665543

>KOG1074|consensus

Probab=99.65  E-value=9.6e-17  Score=115.67  Aligned_cols=60  Identities=25%  Similarity=0.521  Sum_probs=43.8

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ..|.+|++.|...+.|+.|+++|.+++||.|.+|++.|....+|+.||.+|.+..+..-.
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            357777777777777777777777777777777777777777777777777766554433

>KOG3576|consensus

Probab=99.60  E-value=1.8e-16  Score=97.74  Aligned_cols=95  Identities=33%  Similarity=0.519  Sum_probs=86.0

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcC-----------CC
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTG-----------EK   69 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~-----------~~   69 (134)
                      |.+|+.-|...+-+.|..||+.|...-+|.+|+++ |+|.+||.|..|++.|.....|..|.+.-+|           ++
T Consensus       133 lnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rt-htgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~k  211 (267)
T KOG3576|consen  133 LNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRT-HTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAK  211 (267)
T ss_pred             HHHHhhhccHHHHHHHhhccCcccchhhhhhhhcc-ccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhh
Confidence            56888899888899999999999999999999997 9999999999999999999999999886443           46


Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      .|.|..||..-.....+-.|++.++..
T Consensus       212 l~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  212 LYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             eeeecccCCCCCChhHHHHHHHhcCCC
Confidence            699999999999999999999988753

>KOG3623|consensus

Probab=99.59  E-value=7e-16  Score=110.13  Aligned_cols=103  Identities=20%  Similarity=0.400  Sum_probs=87.8

Q ss_pred             eeCccchhhccChHHHHHHHhcccc-CCCceecCCCCCccCChhhHHhHHhhhcC-------------CCCcccCccchh
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAHC-TGEMYECCHCARSFPCKSYLIPHLRVHTG-------------EKPYACNLCTVR   79 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h~-~~~~~~C~~C~~~~~~~~~l~~h~~~h~~-------------~~~~~C~~C~~~   79 (134)
                      ..|+.|.+.+.....|+.|++..|. .+.-|.|..|..+|.....|.+|+..|..             .+.|+|++|||+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            6899999999999999999986554 34458899999999999999999988852             355999999999


Q ss_pred             hcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhhhh
Q psy12639         80 YLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQVK  116 (134)
Q Consensus        80 f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~  116 (134)
                      |.....|+.|+|+|.||+||.|+  ++.|.-.-+...|.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCcccccc
Confidence            99999999999999999999999  67887777766665

>KOG3608|consensus

Probab=99.56  E-value=2.8e-15  Score=99.40  Aligned_cols=121  Identities=23%  Similarity=0.417  Sum_probs=85.0

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhcccc--CCCc--------------------------eecCCCCCcc
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHC--TGEM--------------------------YECCHCARSF   52 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~--~~~~--------------------------~~C~~C~~~~   52 (134)
                      |..|++.|.++|...|+.||.-|.....|.+|++- .+  ...+                          |.|+.|.-+.
T Consensus       195 LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rR-qt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc  273 (467)
T KOG3608|consen  195 LREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRR-QTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTC  273 (467)
T ss_pred             HHHHHHhcCCCeEEecchHHHHhccccHHHHHHHh-hhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCC
Confidence            56899999999999999999999999999999863 22  1223                          5566666666


Q ss_pred             CChhhHHhHHhh-hcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC----CCCcccchhhhhhhhhhhcCC
Q psy12639         53 PCKSYLIPHLRV-HTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY----APAFVDVNTVAQVKQEYEELP  123 (134)
Q Consensus        53 ~~~~~l~~h~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  123 (134)
                      ...+.|..|++. |..++||+|+.|.+.|.+.+.|.+|...|. +-.|.|.    ...+....++..|..+.++..
T Consensus       274 ~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  274 SSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             CChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCC
Confidence            666666666664 666777777777777777777777777665 5566666    234555556666666655433

>KOG3608|consensus

Probab=99.45  E-value=2.4e-13  Score=90.36  Aligned_cols=118  Identities=20%  Similarity=0.366  Sum_probs=94.4

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCc--cch
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNL--CTV   78 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~   78 (134)
                      |+.|++.|  ...|+|+.|+.+....++|..|++..|...+||.|..|...+...+.|..|...|. +..|.|..  |..
T Consensus       253 L~~Hv~rH--vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~  329 (467)
T KOG3608|consen  253 LKSHVVRH--VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHY  329 (467)
T ss_pred             HHHHHHHh--hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcH
Confidence            45666665  34689999999999999999999988999999999999999999999999998887 66788877  888


Q ss_pred             hhcCHHHHHHHHHhhc-CC--CCCCCC--CCCcccchhhhhhhhhhhc
Q psy12639         79 RYLRSYELVLHLKKCH-RE--DARNPY--APAFVDVNTVAQVKQEYEE  121 (134)
Q Consensus        79 ~f~~~~~l~~H~~~~~-~~--~~~~~~--~~~~~~~~~~~~~~~~~~~  121 (134)
                      .|.+...+++|.+.++ +.  -+|.|-  ...|.+-.+|..|....+.
T Consensus       330 s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  330 SVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            8888888999988766 33  335555  6677777777777755543

>PHA00733 hypothetical protein

Probab=99.42  E-value=2.8e-13  Score=79.86  Aligned_cols=84  Identities=19%  Similarity=0.247  Sum_probs=69.3

Q ss_pred             CCCceeCccchhhccChHHHHHHH--h--ccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHH
Q psy12639         10 GAKPYACTECDQKFNRNSKLKIHY--N--LAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYE   85 (134)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~h~--~--~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~   85 (134)
                      ..+++.|.+|...|.....|..+.  .  ..+.+.+||.|..|++.|.....|..|++.+  ..+|.|..|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            356789999999998877776651  1  1234578999999999999999999999876  357999999999999999


Q ss_pred             HHHHHHhhcC
Q psy12639         86 LVLHLKKCHR   95 (134)
Q Consensus        86 l~~H~~~~~~   95 (134)
                      |..|+...|+
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            9999987764

>PHA02768 hypothetical protein; Provisional

Probab=99.10  E-value=3e-11  Score=59.88  Aligned_cols=40  Identities=30%  Similarity=0.516  Sum_probs=21.5

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHH
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSY   84 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~   84 (134)
                      |.|+.||+.|...+.|..|++.|.  +++.|..|++.|...+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccc
Confidence            455555555555555555555554  4555555555555443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.07  E-value=3.4e-10  Score=80.83  Aligned_cols=101  Identities=16%  Similarity=0.282  Sum_probs=78.6

Q ss_pred             cCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhc-------
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYL-------   81 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~-------   81 (134)
                      ..++++.|+.|++.|. ...|..|+.. +.  .++.|+ |+..+ ....|..|+..|...+++.|+.|++.|.       
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~-~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d  522 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKV-FH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMD  522 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHh-cC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccc
Confidence            3456789999999996 6789999987 53  689999 99755 6689999999999999999999999985       


Q ss_pred             ---CHHHHHHHHHhhcCCCCCCCCCC-Ccccchhhhhhh
Q psy12639         82 ---RSYELVLHLKKCHREDARNPYAP-AFVDVNTVAQVK  116 (134)
Q Consensus        82 ---~~~~l~~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~  116 (134)
                         ..+.|..|...+ +.+++.|..+ .......+..|.
T Consensus       523 ~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlrdm~~H~  560 (567)
T PLN03086        523 VRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLKEMDIHQ  560 (567)
T ss_pred             hhhhhhhHHHHHHhc-CCcceEccccCCeeeehhHHHHH
Confidence               246899999986 7888888833 233333344443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.04  E-value=8.3e-10  Score=78.89  Aligned_cols=54  Identities=20%  Similarity=0.430  Sum_probs=26.3

Q ss_pred             ecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         44 ECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        44 ~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      .|+.|+..|. ...|..|+..++  +++.|+ |++.+ .+..|..|+..+..++++.|.
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~  508 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCR  508 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCC
Confidence            4555555553 344555555442  445555 55432 344555555555555555554

>PHA00733 hypothetical protein

Probab=98.99  E-value=8.1e-10  Score=65.24  Aligned_cols=57  Identities=21%  Similarity=0.428  Sum_probs=49.6

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      +.+.+||.|+.|++.|.+...|..|++. +  ..++.|..|++.|.....|..|+...++
T Consensus        68 ~~~~kPy~C~~Cgk~Fss~s~L~~H~r~-h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         68 SKAVSPYVCPLCLMPFSSSVSLKQHIRY-T--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCCCCccCCCCCCcCCCHHHHHHHHhc-C--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3457899999999999999999999985 4  3479999999999999999999887543

>PHA02768 hypothetical protein; Provisional

Probab=98.97  E-value=2.7e-10  Score=56.54  Aligned_cols=43  Identities=16%  Similarity=0.339  Sum_probs=38.2

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhH
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYL   58 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l   58 (134)
                      -|.|+.||+.|...++|..|++. |+  +++.|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~-H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRK-HN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHh-cC--CcccCCcccceeccccee
Confidence            37999999999999999999998 87  588999999999876655

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.91  E-value=3.5e-10  Score=48.25  Aligned_cols=24  Identities=42%  Similarity=1.000  Sum_probs=17.7

Q ss_pred             ChhHhhhccCCCceeCccchhhcc
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFN   24 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~   24 (134)
                      |++|+++|.+++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            456777777777777777777775

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.89  E-value=9.6e-10  Score=46.86  Aligned_cols=24  Identities=50%  Similarity=1.016  Sum_probs=15.8

Q ss_pred             HHhHHhhhcCCCCcccCccchhhc
Q psy12639         58 LIPHLRVHTGEKPYACNLCTVRYL   81 (134)
Q Consensus        58 l~~h~~~h~~~~~~~C~~C~~~f~   81 (134)
                      |..|++.|.+++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            556666666666666666666664

...

>PHA00616 hypothetical protein

Probab=98.81  E-value=3.6e-09  Score=50.06  Aligned_cols=33  Identities=21%  Similarity=0.395  Sum_probs=26.9

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ||+|+.||+.|...+++..|++.+|+++++.++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            578888888888888888888888888777665

>KOG3993|consensus

Probab=98.69  E-value=6.1e-09  Score=71.18  Aligned_cols=82  Identities=27%  Similarity=0.554  Sum_probs=61.7

Q ss_pred             eeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhc--------C------------------
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHT--------G------------------   67 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~--------~------------------   67 (134)
                      |.|..|...|...-.|..|.-. -...-.|.|+.|++.|+-..+|..|.+=|.        +                  
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~-RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCP-RIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCC-eeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            6788888777777777777643 334445778888888888888888766552        1                  


Q ss_pred             -------CCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         68 -------EKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        68 -------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                             +-.|.|..|++.|.+.+-|++|+..|+..
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence                   12489999999999999999999998854

>PHA00616 hypothetical protein

Probab=98.58  E-value=2.5e-08  Score=47.22  Aligned_cols=33  Identities=15%  Similarity=0.254  Sum_probs=20.5

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      ||.|+.||+.|....+|..|++. |++++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~-~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLS-VHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHH-hcCCCcccee
Confidence            45666666666666666666665 5566665554

>PHA00732 hypothetical protein

Probab=98.49  E-value=1.3e-07  Score=51.07  Aligned_cols=47  Identities=23%  Similarity=0.371  Sum_probs=29.2

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhh
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      ||.|..|++.|.+..+|..|++..|.+   +.|+.|++.|.   .+..|..+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhccc
Confidence            466777777777777777777532432   35777777765   355565443

>PHA00732 hypothetical protein

Probab=98.49  E-value=1.1e-07  Score=51.45  Aligned_cols=46  Identities=28%  Similarity=0.442  Sum_probs=38.7

Q ss_pred             ceecCCCCCccCChhhHHhHHhh-hcCCCCcccCccchhhcCHHHHHHHHHhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRV-HTGEKPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      ||.|..|++.|.....|..|++. |.   ++.|+.|++.|.   .+..|.+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            57899999999999999999985 54   368999999998   477887654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.48  E-value=4.2e-07  Score=45.68  Aligned_cols=49  Identities=31%  Similarity=0.568  Sum_probs=26.3

Q ss_pred             eecCCCCCccCChhhHHhHHhh-hcCC-CCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         43 YECCHCARSFPCKSYLIPHLRV-HTGE-KPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |.|++|++ ..+...|..|... |..+ +.+.||+|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55666666 3444556666544 3332 3466666665433  36666666544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.37  E-value=6.7e-07  Score=44.94  Aligned_cols=51  Identities=24%  Similarity=0.395  Sum_probs=40.9

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCC-CceecCCCCCccCChhhHHhHHhhhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTG-EMYECCHCARSFPCKSYLIPHLRVHT   66 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~-~~~~C~~C~~~~~~~~~l~~h~~~h~   66 (134)
                      .|.|+.|++ ..+...|..|....|..+ +.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            488999999 566788999998878765 4689999998654  48889987654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.29  E-value=5.1e-07  Score=37.14  Aligned_cols=22  Identities=23%  Similarity=0.689  Sum_probs=16.3

Q ss_pred             cccCccchhhcCHHHHHHHHHh
Q psy12639         71 YACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5677777777777777777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=98.24  E-value=4.8e-07  Score=62.19  Aligned_cols=54  Identities=30%  Similarity=0.663  Sum_probs=45.5

Q ss_pred             CceeCccchhhccChHHHHHHHhccccC---------------------------------CCceecCCCCCccCChhhH
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCT---------------------------------GEMYECCHCARSFPCKSYL   58 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~---------------------------------~~~~~C~~C~~~~~~~~~l   58 (134)
                      --|+|+.|++.|+-..+|..|.+. |.-                                 ..-|.|..|++.|.....|
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRW-HKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYL  372 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRW-HKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYL  372 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcc-cCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHH
Confidence            359999999999999999999987 631                                 1138899999999999999


Q ss_pred             HhHHhhhc
Q psy12639         59 IPHLRVHT   66 (134)
Q Consensus        59 ~~h~~~h~   66 (134)
                      ..|+.+|.
T Consensus       373 rKHqlthq  380 (500)
T KOG3993|consen  373 RKHQLTHQ  380 (500)
T ss_pred             HHhHHhhh
Confidence            99977664

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.17  E-value=1.4e-06  Score=49.18  Aligned_cols=73  Identities=19%  Similarity=0.330  Sum_probs=21.7

Q ss_pred             eCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhh
Q psy12639         15 ACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        15 ~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      .|..|+..|.+...+..|+...|.-..+     ....+.....+....+.-. ...+.|..|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc-----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4889999999999999999876644322     1111122333333333222 23699999999999999999999964

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.16  E-value=4.7e-07  Score=60.20  Aligned_cols=72  Identities=29%  Similarity=0.521  Sum_probs=47.0

Q ss_pred             CCCceeCcc--chhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHH
Q psy12639         10 GAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELV   87 (134)
Q Consensus        10 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~   87 (134)
                      ++|||.|++  |.+.++....|+.|+.--|...+..+-+.          -..+.-.-...|||.|++|+|.|.....|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~----------p~~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPS----------PEKMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCC----------ccccccccccCCceeccccchhhccCccce
Confidence            358888887  88888888888888864443333221110          001111134568999999999999988888


Q ss_pred             HHHH
Q psy12639         88 LHLK   91 (134)
Q Consensus        88 ~H~~   91 (134)
                      -|..
T Consensus       416 YHr~  419 (423)
T COG5189         416 YHRK  419 (423)
T ss_pred             eccc
Confidence            7754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.12  E-value=2.5e-06  Score=35.18  Aligned_cols=24  Identities=25%  Similarity=0.667  Sum_probs=16.2

Q ss_pred             cccCccchhhcCHHHHHHHHHhhc
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |.|+.|++.|.+...|..|+..+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777777654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.99  E-value=3.3e-06  Score=36.08  Aligned_cols=25  Identities=20%  Similarity=0.457  Sum_probs=17.0

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhc
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776554

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.97  E-value=5.7e-06  Score=33.90  Aligned_cols=22  Identities=36%  Similarity=0.753  Sum_probs=13.6

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.79  E-value=1.6e-05  Score=32.63  Aligned_cols=22  Identities=27%  Similarity=0.726  Sum_probs=11.9

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.|+.|++.|.+...|..|+..
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            4566666666666666666554

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.79  E-value=2.8e-05  Score=37.75  Aligned_cols=33  Identities=27%  Similarity=0.453  Sum_probs=20.3

Q ss_pred             cCCCCcccCccchhhcCHHHHHHHHHhhcCCCC
Q psy12639         66 TGEKPYACNLCTVRYLRSYELVLHLKKCHREDA   98 (134)
Q Consensus        66 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   98 (134)
                      ..+.|-.|++|+..+++..+|++|+.+.|+.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            345677888888888888888888877776554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.71  E-value=2.5e-05  Score=33.24  Aligned_cols=23  Identities=35%  Similarity=0.777  Sum_probs=14.3

Q ss_pred             ceeCccchhhccChHHHHHHHhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|..|++.|.+...|..|++.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRS   23 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCT
T ss_pred             CCCCCccCCccCChhHHHHHhHH
Confidence            45666666666666666666654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.55  E-value=9e-05  Score=30.79  Aligned_cols=24  Identities=21%  Similarity=0.441  Sum_probs=19.4

Q ss_pred             cccCccchhhcCHHHHHHHHHhhc
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            568888888888888888888553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.28  E-value=0.00025  Score=34.50  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=18.2

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKP   70 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   70 (134)
                      .....|-.|++|+..+....+|..|+...++.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3345566777777777777777777766555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.10  E-value=0.00062  Score=28.09  Aligned_cols=20  Identities=40%  Similarity=0.780  Sum_probs=11.6

Q ss_pred             eCccchhhccChHHHHHHHh
Q psy12639         15 ACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        15 ~C~~C~~~f~~~~~l~~h~~   34 (134)
                      .|..|++.|.....+..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            45555566655555555554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.03  E-value=0.00037  Score=28.90  Aligned_cols=21  Identities=24%  Similarity=0.705  Sum_probs=13.9

Q ss_pred             cccCccchhhcCHHHHHHHHH
Q psy12639         71 YACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      |.|..|++.|.+...+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            456667777777777666665

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.02  E-value=0.00045  Score=28.67  Aligned_cols=22  Identities=23%  Similarity=0.691  Sum_probs=13.4

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.|..|++.|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666643

>PRK04860 hypothetical protein; Provisional

Probab=96.97  E-value=0.00066  Score=41.76  Aligned_cols=38  Identities=29%  Similarity=0.541  Sum_probs=29.2

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCH
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRS   83 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~   83 (134)
                      +|.|. |+.   ....+..|.+.+.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57887 876   566678888888888888888888877643

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.96  E-value=0.00072  Score=27.77  Aligned_cols=23  Identities=35%  Similarity=0.632  Sum_probs=12.4

Q ss_pred             cccCccchhhcCHHHHHHHHHhhc
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |.|+.|+.... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666665555 566666666554

>KOG4173|consensus

Probab=96.76  E-value=0.001  Score=42.04  Aligned_cols=77  Identities=30%  Similarity=0.623  Sum_probs=62.3

Q ss_pred             eeCcc--chhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhc----------CCCCccc--Cccchh
Q psy12639         14 YACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHT----------GEKPYAC--NLCTVR   79 (134)
Q Consensus        14 ~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~----------~~~~~~C--~~C~~~   79 (134)
                      +.|+.  |...|.....+..|..+.|.+    .|.+|.+.|.+...|..|+.-.+          |.-.|+|  ..|+..
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            67887  888999988888888765544    69999999999999999976532          4456888  459999


Q ss_pred             hcCHHHHHHHHHhhc
Q psy12639         80 YLRSYELVLHLKKCH   94 (134)
Q Consensus        80 f~~~~~l~~H~~~~~   94 (134)
                      |.+..+.+.|+-..|
T Consensus       156 FkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhHHHHhc
Confidence            999999999986654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.73  E-value=0.0014  Score=27.29  Aligned_cols=21  Identities=24%  Similarity=0.499  Sum_probs=13.6

Q ss_pred             cccCccchhhcCHHHHHHHHHh
Q psy12639         71 YACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      ..|+.||+.| ....|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3577777777 55566677654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.69  E-value=0.0004  Score=29.48  Aligned_cols=22  Identities=23%  Similarity=0.599  Sum_probs=17.1

Q ss_pred             cccCccchhhcCHHHHHHHHHh
Q psy12639         71 YACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      |.|..|++.|.+...+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6688888888888888877653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.66  E-value=0.0015  Score=40.18  Aligned_cols=38  Identities=24%  Similarity=0.690  Sum_probs=32.4

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCCh
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCK   55 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~   55 (134)
                      +|.|. |+.   ...++..|.++ |.++++|.|..|+..+...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri-~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRV-VRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHH-hcCCccEECCCCCceeEEe
Confidence            59998 987   56778999997 9999999999999887543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.61  E-value=0.00084  Score=28.47  Aligned_cols=22  Identities=32%  Similarity=0.769  Sum_probs=14.6

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.|..|++.|.+...+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566777777777776666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.25  E-value=0.0048  Score=25.22  Aligned_cols=21  Identities=33%  Similarity=0.662  Sum_probs=10.0

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.|+.|+.... ...|..|++.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            34555555554 5555555544

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=95.85  E-value=0.0048  Score=30.58  Aligned_cols=31  Identities=29%  Similarity=0.477  Sum_probs=26.5

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccc
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAH   37 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h   37 (134)
                      ..-|+..+.|+-|+..|....++..|++..|
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4457788999999999999999999998755

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.53  E-value=0.01  Score=26.56  Aligned_cols=22  Identities=32%  Similarity=0.726  Sum_probs=17.8

Q ss_pred             CcccCccchhhcCHHHHHHHHH
Q psy12639         70 PYACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4778888888888888888875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.32  E-value=0.0084  Score=40.60  Aligned_cols=49  Identities=20%  Similarity=0.465  Sum_probs=33.7

Q ss_pred             CCCcccCc--cchhhcCHHHHHHHHHhhc-------------------CCCCCCCC--CCCcccchhhhhhh
Q psy12639         68 EKPYACNL--CTVRYLRSYELVLHLKKCH-------------------REDARNPY--APAFVDVNTVAQVK  116 (134)
Q Consensus        68 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~-------------------~~~~~~~~--~~~~~~~~~~~~~~  116 (134)
                      ++||.|++  |+|.|.+...|+-|+.-.|                   ..+||.|+  ++.+...+.|.-|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            58888876  8888888888888876433                   23777777  55565555555544

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=95.05  E-value=0.018  Score=25.58  Aligned_cols=9  Identities=33%  Similarity=1.265  Sum_probs=4.6

Q ss_pred             CCcccCccc
Q psy12639         69 KPYACNLCT   77 (134)
Q Consensus        69 ~~~~C~~C~   77 (134)
                      .++.|+.|+
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            345555554

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.01  E-value=0.021  Score=25.50  Aligned_cols=22  Identities=18%  Similarity=0.573  Sum_probs=12.1

Q ss_pred             ceeCccchhhccChHHHHHHHh
Q psy12639         13 PYACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~   34 (134)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3455555555555555555553

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=94.86  E-value=0.014  Score=46.44  Aligned_cols=26  Identities=31%  Similarity=0.636  Sum_probs=22.6

Q ss_pred             CCCCcccCccchhhcCHHHHHHHHHh
Q psy12639         67 GEKPYACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        67 ~~~~~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      +.++|.|..|...++...+|..|+..
T Consensus       515 ~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  515 PGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CCCcccceeeeeeeecchHHHHHHHH
Confidence            35779999999999999999999874

>KOG1146|consensus

Probab=94.01  E-value=0.04  Score=44.00  Aligned_cols=57  Identities=26%  Similarity=0.490  Sum_probs=47.5

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhcccc------------------------CCCceecCCCCCccCChhhHHhHHh
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHC------------------------TGEMYECCHCARSFPCKSYLIPHLR   63 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~------------------------~~~~~~C~~C~~~~~~~~~l~~h~~   63 (134)
                      +...+-+.|+.|+..|+....|..||+..|.                        +.++|.|..|...+.....|..|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            4445779999999999999999999997552                        2357899999999999989999976


Q ss_pred             h
Q psy12639         64 V   64 (134)
Q Consensus        64 ~   64 (134)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            5

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.44  E-value=0.085  Score=29.34  Aligned_cols=25  Identities=28%  Similarity=0.679  Sum_probs=21.4

Q ss_pred             CceecCCCCCccCChhhHHhHHhhh
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      ..+.|..|+..|.+...|..|++.+
T Consensus        49 ~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   49 ESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3689999999999999999999874

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.37  E-value=0.061  Score=26.74  Aligned_cols=29  Identities=28%  Similarity=0.605  Sum_probs=21.8

Q ss_pred             cCCCCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         66 TGEKPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        66 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      -|+..+.||.|+..|..+.+..+|....|
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            45666788888888888888888876544

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=93.05  E-value=0.088  Score=26.59  Aligned_cols=31  Identities=19%  Similarity=0.554  Sum_probs=18.0

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      .|.|+.||+......     .+.-....+|.|+.||
T Consensus        27 ~F~CPnCGe~~I~Rc-----~~CRk~g~~Y~Cp~CG   57 (61)
T COG2888          27 KFPCPNCGEVEIYRC-----AKCRKLGNPYRCPKCG   57 (61)
T ss_pred             EeeCCCCCceeeehh-----hhHHHcCCceECCCcC
Confidence            477777776543332     2223345677777776

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.98  E-value=0.02  Score=40.23  Aligned_cols=61  Identities=31%  Similarity=0.477  Sum_probs=43.6

Q ss_pred             ceecCCCCCccCChhhHHhHHh--hhcCC--CCcccC--ccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         42 MYECCHCARSFPCKSYLIPHLR--VHTGE--KPYACN--LCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.+...+..|...+....+..+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            4667777777777777777777  67777  777777  6777777777777777777665544433

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=92.69  E-value=0.15  Score=23.24  Aligned_cols=32  Identities=25%  Similarity=0.721  Sum_probs=16.7

Q ss_pred             eCccchhhccChHHHHHHHhccccCCCceecCCCCCcc
Q psy12639         15 ACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSF   52 (134)
Q Consensus        15 ~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~   52 (134)
                      .|+.|+..|.-..+     +. ..+.....|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~-----~l-~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDD-----KL-PAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHH-----Hc-ccCCcEEECCCCCcEe
Confidence            56666666655543     11 1223345666666555

>KOG2231|consensus

Probab=92.62  E-value=0.21  Score=37.57  Aligned_cols=16  Identities=31%  Similarity=0.416  Sum_probs=9.6

Q ss_pred             hccChHHHHHHHhccc
Q psy12639         22 KFNRNSKLKIHYNLAH   37 (134)
Q Consensus        22 ~f~~~~~l~~h~~~~h   37 (134)
                      .|.+...|+.|+...|
T Consensus       123 ~~~s~~~Lk~H~~~~H  138 (669)
T KOG2231|consen  123 EFKSVENLKNHMRDQH  138 (669)
T ss_pred             chhHHHHHHHHHHHhh
Confidence            3346667777775434

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.61  E-value=0.039  Score=38.77  Aligned_cols=63  Identities=25%  Similarity=0.472  Sum_probs=52.0

Q ss_pred             CceeCccchhhccChHHHHHHHhc-cccCC--CceecC--CCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL-AHCTG--EMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~-~h~~~--~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      .++.|..|...|.....+..|.+. .|.++  +++.|+  .|++.|.....+..|...|.+..++.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            467888899999999999999883 48888  899998  7999999999899998888877665553

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=92.06  E-value=0.17  Score=23.05  Aligned_cols=33  Identities=18%  Similarity=0.529  Sum_probs=15.7

Q ss_pred             eeCccchhhccChHHHHHHHhccccCCCceecCCCCCcc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSF   52 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~   52 (134)
                      +.|+.|+..|.-.....      ........|+.|+..|
T Consensus         3 ~~CP~C~~~~~v~~~~~------~~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL------GANGGKVRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEEEeCHHHc------CCCCCEEECCCCCCEE
Confidence            35666666655544311      1111235566666554

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=91.71  E-value=0.13  Score=23.02  Aligned_cols=9  Identities=22%  Similarity=0.630  Sum_probs=4.3

Q ss_pred             eecCCCCCc
Q psy12639         43 YECCHCARS   51 (134)
Q Consensus        43 ~~C~~C~~~   51 (134)
                      |.|..||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            445555544

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=91.29  E-value=0.3  Score=22.13  Aligned_cols=32  Identities=22%  Similarity=0.711  Sum_probs=15.1

Q ss_pred             eCccchhhccChHHHHHHHhccccCCCceecCCCCCcc
Q psy12639         15 ACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSF   52 (134)
Q Consensus        15 ~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~   52 (134)
                      .|+.|+..|.-....     . -.......|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~-----i-p~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK-----I-PPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH-----C-CCCCcEEECCCCCCEe
Confidence            456666555554431     1 1222234566665544

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=91.07  E-value=0.17  Score=31.38  Aligned_cols=23  Identities=30%  Similarity=0.873  Sum_probs=17.9

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      .|+|++||.++             .++.|..||.||
T Consensus       134 ~~vC~vCGy~~-------------~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYTH-------------EGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCcc-------------cCCCCCcCCCCC
Confidence            58899998653             456788899998

>KOG2893|consensus

Probab=91.04  E-value=0.048  Score=35.61  Aligned_cols=49  Identities=27%  Similarity=0.648  Sum_probs=32.0

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +++ |=+|.+.|....-|.+|++.    +.|+|.+|.+.+-+...|..|....|
T Consensus        10 kpw-cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            444 55577777777777777653    44778888777766667766654333

>KOG2186|consensus

Probab=90.93  E-value=0.16  Score=33.49  Aligned_cols=49  Identities=14%  Similarity=0.453  Sum_probs=32.2

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhh
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      .|.|..||-+..-.. +..|+.. -.+ .-|.|-.|+..|.. .....|...-
T Consensus         3 ~FtCnvCgEsvKKp~-vekH~sr-Crn-~~fSCIDC~k~F~~-~sYknH~kCI   51 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQ-VEKHMSR-CRN-AYFSCIDCGKTFER-VSYKNHTKCI   51 (276)
T ss_pred             EEehhhhhhhccccc-hHHHHHh-ccC-CeeEEeeccccccc-chhhhhhhhc
Confidence            577888887766544 5667753 444 45788888888876 4556665543

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=90.86  E-value=0.19  Score=31.04  Aligned_cols=33  Identities=12%  Similarity=0.355  Sum_probs=22.2

Q ss_pred             CCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhh
Q psy12639         39 TGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRY   80 (134)
Q Consensus        39 ~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f   80 (134)
                      ...-|.|+.|+..|++...+.         ..|.|+.||...
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            444577888887777766653         257888887543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.27  E-value=0.18  Score=34.85  Aligned_cols=23  Identities=26%  Similarity=0.719  Sum_probs=11.5

Q ss_pred             eeCcc--chhhccChHHHHHHHhcc
Q psy12639         14 YACTE--CDQKFNRNSKLKIHYNLA   36 (134)
Q Consensus        14 ~~C~~--C~~~f~~~~~l~~h~~~~   36 (134)
                      |.|+.  |.........|..|.+..
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~  176 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQ  176 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhh
Confidence            44543  444444455566666543

>smart00531 TFIIE Transcription initiation factor IIE

Probab=89.69  E-value=0.25  Score=30.04  Aligned_cols=35  Identities=14%  Similarity=0.467  Sum_probs=16.6

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRY   80 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f   80 (134)
                      -|.|+.|+..|.....+..   ... ...|.|+.||...
T Consensus        99 ~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       99 YYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEEL  133 (147)
T ss_pred             EEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCEE
Confidence            4666666666654333211   011 2226666666543

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=89.54  E-value=0.085  Score=34.22  Aligned_cols=23  Identities=17%  Similarity=0.382  Sum_probs=16.1

Q ss_pred             CCceeCccchhhccChHHHHHHH
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHY   33 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~   33 (134)
                      ++...||+|+..|....-.....
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCc
Confidence            35678999999998876444444

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=89.50  E-value=0.27  Score=30.99  Aligned_cols=33  Identities=15%  Similarity=0.381  Sum_probs=21.4

Q ss_pred             CCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhc
Q psy12639         40 GEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYL   81 (134)
Q Consensus        40 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   81 (134)
                      ..-|.|+.|+..|++...+.         ..|.|+.||....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            34577888887777666542         2578888875443

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.50  E-value=0.46  Score=27.49  Aligned_cols=78  Identities=18%  Similarity=0.347  Sum_probs=50.2

Q ss_pred             CceeCccchhhccChHHHHHHHhccccC-CCc------------eecCCCCCccCChhhHHhHHhhhcCCCCcccCccch
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCT-GEM------------YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTV   78 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~-~~~------------~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   78 (134)
                      -|..|+.||....+...|.+..-  |.- -++            -.|-.|...|........-  .-.....|.|+.|..
T Consensus        14 LP~~CpiCgLtLVss~HLARSyH--HLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~~~~~~~y~C~~C~~   89 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYH--HLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--ELKDSHRYVCAVCKN   89 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhh--ccCCCcccccccccccCCCCcccCcCCCCCCccccccc--ccccccceeCCCCCC
Confidence            47889999999888888776542  211 111            1377888887654311100  012344699999999


Q ss_pred             hhcCHHHHHHHHHhh
Q psy12639         79 RYLRSYELVLHLKKC   93 (134)
Q Consensus        79 ~f~~~~~l~~H~~~~   93 (134)
                      .|--.-+.-.|-.+|
T Consensus        90 ~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        90 VFCVDCDVFVHESLH  104 (112)
T ss_pred             ccccccchhhhhhcc
Confidence            998887777776555

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=88.93  E-value=0.34  Score=24.53  Aligned_cols=31  Identities=19%  Similarity=0.625  Sum_probs=16.4

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      .|.|+.||+.....-     .+--....+|.|+.||
T Consensus        25 ~F~CPnCG~~~I~RC-----~~CRk~~~~Y~CP~CG   55 (59)
T PRK14890         25 KFLCPNCGEVIIYRC-----EKCRKQSNPYTCPKCG   55 (59)
T ss_pred             EeeCCCCCCeeEeec-----hhHHhcCCceECCCCC
Confidence            467777776522221     1222234567777776

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=88.34  E-value=0.68  Score=28.59  Aligned_cols=30  Identities=17%  Similarity=0.441  Sum_probs=15.9

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCCCceecCCCCCc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARS   51 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~   51 (134)
                      ..|.|+.|+..|.....+.          ..|.|+.||..
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~~----------~~F~Cp~Cg~~  137 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAME----------LNFTCPRCGAM  137 (158)
T ss_pred             CeEECCCCCcEeeHHHHHH----------cCCcCCCCCCE
Confidence            4456666665555544432          13566666654

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.73  E-value=1.7  Score=24.86  Aligned_cols=80  Identities=21%  Similarity=0.302  Sum_probs=45.9

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCCCceecCCCCCc-------cCChhhHH---------hHHhhhcCCCCccc--
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARS-------FPCKSYLI---------PHLRVHTGEKPYAC--   73 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~-------~~~~~~l~---------~h~~~h~~~~~~~C--   73 (134)
                      +...|..|+.+... +.+..|.+..|.......-..-...       ......+.         .....   ..-|.|  
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~---~~G~~C~~   85 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPV---YDGYRCQC   85 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCC---CCCeeeec
Confidence            45789999987766 7789999864543211100000000       00000000         00000   123899  


Q ss_pred             --CccchhhcCHHHHHHHHHhhcC
Q psy12639         74 --NLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        74 --~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                        ..|+....+...+..|.+.+|+
T Consensus        86 ~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   86 DPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCCCcEeccHHHHHHHHHHhcC
Confidence              9999999999999999998774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=87.43  E-value=0.32  Score=30.65  Aligned_cols=16  Identities=19%  Similarity=0.501  Sum_probs=7.4

Q ss_pred             CcccCccchhhcCHHH
Q psy12639         70 PYACNLCTVRYLRSYE   85 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~   85 (134)
                      -|.|+.|+..|+...+
T Consensus       117 ~Y~Cp~C~~rytf~eA  132 (178)
T PRK06266        117 FFFCPNCHIRFTFDEA  132 (178)
T ss_pred             EEECCCCCcEEeHHHH
Confidence            3445555544444433

>KOG2482|consensus

Probab=87.20  E-value=0.76  Score=31.88  Aligned_cols=22  Identities=27%  Similarity=0.573  Sum_probs=20.2

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      +.|-.|.+.|+.+..|..||+.
T Consensus       196 ~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHh
Confidence            6899999999999999999974

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.31  E-value=0.93  Score=18.87  Aligned_cols=19  Identities=21%  Similarity=0.403  Sum_probs=11.9

Q ss_pred             ccCccchhhcCHHHHHHHHH
Q psy12639         72 ACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        72 ~C~~C~~~f~~~~~l~~H~~   91 (134)
                      .||.|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            467777766 4456666655

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.24  E-value=0.54  Score=27.10  Aligned_cols=15  Identities=20%  Similarity=0.642  Sum_probs=8.9

Q ss_pred             CCcccCccchhhcCH
Q psy12639         69 KPYACNLCTVRYLRS   83 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~   83 (134)
                      .|..||.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            455666666666544

The function of members of this family is unknown.

>PHA00626 hypothetical protein

Probab=85.80  E-value=0.45  Score=23.77  Aligned_cols=12  Identities=25%  Similarity=0.490  Sum_probs=6.0

Q ss_pred             CcccCccchhhc
Q psy12639         70 PYACNLCTVRYL   81 (134)
Q Consensus        70 ~~~C~~C~~~f~   81 (134)
                      .|.|+.||..|+
T Consensus        23 rYkCkdCGY~ft   34 (59)
T PHA00626         23 DYVCCDCGYNDS   34 (59)
T ss_pred             ceEcCCCCCeec
Confidence            355555555444

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=85.47  E-value=0.19  Score=30.88  Aligned_cols=16  Identities=25%  Similarity=0.532  Sum_probs=11.0

Q ss_pred             ceecCCCCCccCChhh
Q psy12639         42 MYECCHCARSFPCKSY   57 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~   57 (134)
                      .+.|+.||.+|.....
T Consensus        28 ~~~c~~c~~~f~~~e~   43 (154)
T PRK00464         28 RRECLACGKRFTTFER   43 (154)
T ss_pred             eeeccccCCcceEeEe
Confidence            3678888887766544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=85.25  E-value=3.1  Score=29.08  Aligned_cols=75  Identities=27%  Similarity=0.480  Sum_probs=44.2

Q ss_pred             eCccchhhccChHHHHHHHhccccCCCceecCCCCC----ccCChhhHHhHHhhhcCCCCcccCc--cc----hhhcCHH
Q psy12639         15 ACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCAR----SFPCKSYLIPHLRVHTGEKPYACNL--CT----VRYLRSY   84 (134)
Q Consensus        15 ~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~----~~~~~~~l~~h~~~h~~~~~~~C~~--C~----~~f~~~~   84 (134)
                      .|..|...|-....|..|++..|.  +=+.|...+.    .|.....|..|.+..+    |.|..  |.    ..|....
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE--~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~  295 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE--ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHT  295 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh--hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHH
Confidence            577788888888888888875432  2234443332    2555566666655432    55533  32    3577777


Q ss_pred             HHHHHHHhhcC
Q psy12639         85 ELVLHLKKCHR   95 (134)
Q Consensus        85 ~l~~H~~~~~~   95 (134)
                      .|..|+-.-|+
T Consensus       296 el~~h~~~~h~  306 (493)
T COG5236         296 ELLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHHhh
Confidence            77888766554

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=85.19  E-value=0.75  Score=21.88  Aligned_cols=10  Identities=40%  Similarity=1.072  Sum_probs=4.8

Q ss_pred             eeCccchhhc
Q psy12639         14 YACTECDQKF   23 (134)
Q Consensus        14 ~~C~~C~~~f   23 (134)
                      |.|..||..|
T Consensus         3 Y~C~~Cg~~~   12 (44)
T smart00659        3 YICGECGREN   12 (44)
T ss_pred             EECCCCCCEe
Confidence            4455555443

present in RNA polymerase I, II and III

>KOG2893|consensus

Probab=84.44  E-value=0.29  Score=32.12  Aligned_cols=45  Identities=24%  Similarity=0.547  Sum_probs=34.0

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHH
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL   62 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~   62 (134)
                      ||| |..|++.|....-|..|++.     +.|.|.+|-+...+-..|..|.
T Consensus        10 kpw-cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceeeh
Confidence            443 77799999999988888765     4689999987766655666554

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.15  E-value=1  Score=21.17  Aligned_cols=26  Identities=31%  Similarity=0.420  Sum_probs=14.1

Q ss_pred             CCCCcccCccchhhcC----HHHHHHHHHh
Q psy12639         67 GEKPYACNLCTVRYLR----SYELVLHLKK   92 (134)
Q Consensus        67 ~~~~~~C~~C~~~f~~----~~~l~~H~~~   92 (134)
                      +.....|..|++.+..    .+.|..|++.
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            3445677777776655    3677777743

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>KOG2186|consensus

Probab=83.95  E-value=0.76  Score=30.45  Aligned_cols=50  Identities=18%  Similarity=0.315  Sum_probs=37.5

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      |.|..||....-+ .+..|+...++ .-|.|-.|++.|.. .+...|..--+.
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITE   53 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITE   53 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcch
Confidence            7788999877655 46778887766 55899999999988 677788764443

>KOG2785|consensus

Probab=83.85  E-value=1.4  Score=31.07  Aligned_cols=49  Identities=14%  Similarity=0.385  Sum_probs=39.5

Q ss_pred             ecCCCCCccCChhhHHhHHhhhcC-----------------------CCCcccCccc---hhhcCHHHHHHHHHh
Q psy12639         44 ECCHCARSFPCKSYLIPHLRVHTG-----------------------EKPYACNLCT---VRYLRSYELVLHLKK   92 (134)
Q Consensus        44 ~C~~C~~~~~~~~~l~~h~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~   92 (134)
                      .|..|+..+.+......||..++|                       ...+.|-.|+   +.|.+....+.||..
T Consensus       168 ~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  168 DCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            577888888888888888887654                       2347888898   999999999999974

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=83.49  E-value=0.23  Score=23.31  Aligned_cols=13  Identities=38%  Similarity=1.002  Sum_probs=6.8

Q ss_pred             eeCccchhhccCh
Q psy12639         14 YACTECDQKFNRN   26 (134)
Q Consensus        14 ~~C~~C~~~f~~~   26 (134)
                      |.|..||..|...
T Consensus         6 y~C~~Cg~~fe~~   18 (42)
T PF09723_consen    6 YRCEECGHEFEVL   18 (42)
T ss_pred             EEeCCCCCEEEEE
Confidence            4555555555443

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=83.46  E-value=0.4  Score=23.48  Aligned_cols=12  Identities=42%  Similarity=1.182  Sum_probs=6.4

Q ss_pred             eeCccchhhccC
Q psy12639         14 YACTECDQKFNR   25 (134)
Q Consensus        14 ~~C~~C~~~f~~   25 (134)
                      |.|..||..|..
T Consensus         6 y~C~~Cg~~fe~   17 (52)
T TIGR02605         6 YRCTACGHRFEV   17 (52)
T ss_pred             EEeCCCCCEeEE
Confidence            455555555543

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>smart00614 ZnF_BED BED zinc finger

Probab=83.01  E-value=0.93  Score=22.03  Aligned_cols=21  Identities=33%  Similarity=0.594  Sum_probs=12.8

Q ss_pred             cccCccchhhcCH-----HHHHHHHH
Q psy12639         71 YACNLCTVRYLRS-----YELVLHLK   91 (134)
Q Consensus        71 ~~C~~C~~~f~~~-----~~l~~H~~   91 (134)
                      -.|..|++.++..     ++|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            4566666655443     56777776

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG2231|consensus

Probab=82.80  E-value=2.4  Score=32.29  Aligned_cols=65  Identities=26%  Similarity=0.435  Sum_probs=37.3

Q ss_pred             hHHHHHHHhccccCCC----ceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc------chhhcCHHHHHHHHHhhc
Q psy12639         26 NSKLKIHYNLAHCTGE----MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC------TVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        26 ~~~l~~h~~~~h~~~~----~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~~   94 (134)
                      ...|..|++..-.+..    .-.|..|...|.....|..|++.++    |.|..|      +..|.....|..|-+..|
T Consensus       162 ~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  162 RAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            4556666654211111    1347777777777777777776544    333333      456677777777766554

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=82.54  E-value=0.42  Score=21.98  Aligned_cols=11  Identities=36%  Similarity=1.274  Sum_probs=5.3

Q ss_pred             eeCccchhhcc
Q psy12639         14 YACTECDQKFN   24 (134)
Q Consensus        14 ~~C~~C~~~f~   24 (134)
                      |.|+.||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            44555554443

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=81.14  E-value=0.51  Score=22.54  Aligned_cols=11  Identities=27%  Similarity=1.023  Sum_probs=5.7

Q ss_pred             ceeCccchhhc
Q psy12639         13 PYACTECDQKF   23 (134)
Q Consensus        13 ~~~C~~C~~~f   23 (134)
                      .|.|+.||..|
T Consensus         3 ~y~C~~CG~~~   13 (46)
T PRK00398          3 EYKCARCGREV   13 (46)
T ss_pred             EEECCCCCCEE
Confidence            35555555444

>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]

Probab=80.12  E-value=0.31  Score=36.96  Aligned_cols=56  Identities=23%  Similarity=0.523  Sum_probs=26.1

Q ss_pred             eCccchhhccChHHHHHHHhccccCCCce-ecCCCCCccCChhhHHhHHhhhcCCCCcccCccch
Q psy12639         15 ACTECDQKFNRNSKLKIHYNLAHCTGEMY-ECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTV   78 (134)
Q Consensus        15 ~C~~C~~~f~~~~~l~~h~~~~h~~~~~~-~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   78 (134)
                      .|..||-.|.....|-.-..  ++.-..| .|+.|.+-+....+    .|.|.  .|..|+.||-
T Consensus       125 ~CT~CGPRfTIi~alPYDR~--nTsM~~F~lC~~C~~EY~dP~n----RRfHA--Qp~aCp~CGP  181 (750)
T COG0068         125 NCTNCGPRFTIIEALPYDRE--NTSMADFPLCPFCDKEYKDPLN----RRFHA--QPIACPKCGP  181 (750)
T ss_pred             ccCCCCcceeeeccCCCCcc--cCccccCcCCHHHHHHhcCccc----ccccc--ccccCcccCC
Confidence            35566666655544432221  2222222 36666665555443    23333  4456666663

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	134
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-12
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-12
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-12
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-12
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		8e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		6e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		4e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		7e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		8e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		9e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-05
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		9e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-04
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-04
2ytp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2epu_A	45	Solution Structure Of The Secound C2h2 Type Zinc Fi		5e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		6e-04
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1   MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIP 60
           + +H   HTG KPYAC EC + F++ + L+ H    H   + Y+C  C +SF  +  L  
Sbjct: 93  LRAHQRTHTGEKPYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHT 151
Query: 61  HLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
           H R HTGEKPY C  C   + R   L +H +
Sbjct: 152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 1   MESHLMLHTGAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYL 58
           ++ H   HTG KPY C   +C+++F+R+ +LK H    H   + ++C  C R F    +L
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHL 82
Query: 59  IPHLRVHTGEKPYACNL--CTVRYLRSYELVLH 89
             H R HTGEKP++C    C  ++ RS ELV H
Sbjct: 83  KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+R+++L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSRSAELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+R++ L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSRSADLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+R+ +L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+R+ +L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 2  RPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 61 PFACDICGRKFARSDERKRHTK 82

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+R+ +L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+ +S L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSDSSNLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F+++  L  H  + H   + ++C  C R+F    +L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 70 PYACNLCTVRYLRSYELVLHLK 91
          P+AC++C  ++ RS E   H K
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPY 71
          KPY C EC + F+++S L+ H    H   + Y+C  C +SF   S L  H R HTGEKPY
Sbjct: 3  KPYKCPECGKSFSQSSNLQKH-QRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 72 ACNLCTVRYLRSYELVLHLK 91
           C  C   + RS  L  H +
Sbjct: 62 KCPECGKSFSRSDHLSRHQR 81

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F++ + L  H  + H   + ++C  C R+F  ++ L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 70 PYACNLCTVRY----LRSYELVLHLKK 92
          P+AC++C  ++     R+    +HL++
Sbjct: 62 PFACDICGRKFATLHTRTRHTKIHLRQ 88

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          +PYAC    CD++F++ + L  H  + H   + ++C  C R+F   + L  H+R HTGEK
Sbjct: 3  RPYACPVESCDRRFSQKTNLDTHIRI-HTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 70 PYACNLCTVRY----LRSYELVLHLKK 92
          P+AC++C  ++     R     +HL++
Sbjct: 62 PFACDICGRKFATLHTRDRHTKIHLRQ 88

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 9   TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGE 68
           +G K Y C +C + F   S+   H ++ H     Y C  C + F  K +L+ H+++HTG 
Sbjct: 6   SGDKLYPC-QCGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 69  KPYACNLCTVRYLRSYELVLHLKKCHREDARNPYAPAFVDVNTV 112
           KPY CN+C  R++       H+  C +      Y  A  + NT 
Sbjct: 64  KPYECNICAKRFMWRDSFHRHVTSCTKS-----YEAAKAEQNTT 102

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 14 YACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          + C  C + F R+S L  H  L H     Y C +C + F  KS +  H  +HTGEKP+ C
Sbjct: 2  FDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 74 NLCTVRYLRSYELVLHLKK 92
           +C   + +S  L+ H +K
Sbjct: 61 QVCGKAFSQSSNLITHSRK 79

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 31/94 (32%)
Query: 1  MESHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYL 58
          +++HL  HTG KPY CT   CD +F R+ +L  HY                         
Sbjct: 33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY------------------------- 67
Query: 59 IPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKK 92
              R HTG KP+ C +C   + RS  L LH+K+
Sbjct: 68 ----RKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 1   MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC--HCARSFPCKSYL 58
           M  HL  H G + + C EC + F  +SKLK H  L H   + ++C    C + F     L
Sbjct: 23  MRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRFSLDFNL 80
Query: 59  IPHLRVHTGEKPYAC--NLCTVRYLRSYELVLHL 90
             H+R+HTG++PY C  + C  ++ +S  L  H+
Sbjct: 81  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 4   HLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLI 59
           H+  HTG KP+ CT   C + ++R   LK H   +H   + Y C H  C+++F   S   
Sbjct: 58  HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 60  PHL-RVHTGEKPYACNL--CTVRYLRSYELVLHLKKCH 94
            H  R H+ EKPY C L  CT RY     L  H+K  H
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 1   MESHLMLHTGAKPYACTECDQKFNRNSKLKIH--YNLAHCTGEMYECCHCARSFPCKSYL 58
           ++ H   HTG KP+ C +C + + R   L  H   N  + + +++ C  C  +F  +  L
Sbjct: 23  LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL 82
Query: 59  IPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
             H+  HTGE PY C+ C+ ++++  +L  H+ K H
Sbjct: 83  RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
          ++C  C R+F    +L  H+R HTGEKP+AC++C  ++ RS E   H
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 11 AKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKP 70
          + P+ C  C + F+R  KLK H    H   + Y+C  C  +    S L  HLR+H+ E+P
Sbjct: 6  SGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 71 YACNLCTVRYLRSYELVLHLK 91
          + C +C      S +L +HL+
Sbjct: 65 FKCQICPYASRNSSQLTVHLR 85

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHT 66
          KPY C EC + F+R+S L + +   H   + Y+C  C ++F   S LI H R+HT
Sbjct: 13 KPYGCVECGKAFSRSSIL-VQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
          Y+C  C  SF  K  L  H  VHTGEKPY CN+C  ++ R   L  H +
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 34/105 (32%)
Query: 3   SHLMLHTGAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIP 60
           +H+ +HTG KP+ C    C + F R+  LKIH                            
Sbjct: 80  NHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK--------------------------- 112
Query: 61  HLRVHTGEKPYACNL--CTVRYLRSYELVLHLKKCHREDARNPYA 103
             R HTGEKP+ C    C  R+  S +   H+   H  D   P +
Sbjct: 113 --RTHTGEKPFKCEFEGCDRRFANSSDRKKHM-HVHTSDKSGPSS 154

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
          Y+C  C +SF   S L  H R HTGEKPY C+ C   +++   L+ H
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 31/94 (32%)
Query: 1  MESHLMLHTGAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYL 58
          +++HL  HTG KPY C    C  KF R+ +L  HY                         
Sbjct: 24 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY------------------------- 58
Query: 59 IPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKK 92
              R HTG +P+ C  C   + RS  L LH+K+
Sbjct: 59 ----RKHTGHRPFQCQKCDRAFSRSDHLALHMKR 88

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 44 ECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHR 95
          EC +C + F    YL  HLR HTGEKPY C  C     +   L  HL++ H+
Sbjct: 6  ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 31/94 (32%)
Query: 1  MESHLMLHTGAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYL 58
          +++HL  HTG KPY C    C  KF R+ +L  HY                         
Sbjct: 23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY------------------------- 57
Query: 59 IPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKK 92
              R HTG +P+ C  C   + RS  L LH+K+
Sbjct: 58 ----RKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 6   MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVH 65
           ++  G   Y C  C + +   + L+ H+N+ H   + Y C +C + FP   Y   H   H
Sbjct: 15  LIVDGRVYYICIVCKRSYVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEIHH 73
Query: 66  TGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
           TGE+ Y C  C   ++    +  H+K  H +D
Sbjct: 74  TGERRYQCLACGKSFINYQFMSSHIKSVHSQD 105

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKP 70
          Y C  C ++F  KSYLI H+R HTGEKP
Sbjct: 11 YGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 48 CARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
          C R+F  + +L  H R HT EKPY C LC   + R   L+ H +K H
Sbjct: 8  CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 48 CARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
          C R F     L  H+R+HTG+KP+ C +C   + RS  L  H++
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKP 70
          Y C  C ++F  KSYLI H+R H+GEKP
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKP 40

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 48 CARSFPCKSYLIPHLRVHTGEKPYACNL--CTVRYLRSYELVLHLK 91
          C +++   S+L  H R HTGEKP++C+   C  R+ RS EL  H +
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70

>pdb|2YTP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 687- 719) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYA 72
          YEC  C ++F  KS LI H R+HTGEKP  
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSG 42

>pdb|2EPU|A Chain A, Solution Structure Of The Secound C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 32 Length = 45

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEK 69
          +EC HC +SF  K  L+ H R+HTGEK
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEK 39

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEK 69
          Y C  C + F  KSYLI H R+HTGEK
Sbjct: 11 YGCNECGKDFSSKSYLIVHQRIHTGEK 37

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 1  MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT-GEMYECCHCARSFPCKSYLI 59
          +  H + H+G KPY+C  C  +F R  ++  H      + G+ Y C  C + F    +L 
Sbjct: 23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN 82
Query: 60 PHLR-VHTG 67
           H++ VH+G
Sbjct: 83 GHIKQVHSG 91

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPY 71
          K + C  C + F ++  L IH    H     Y C  C ++F  + +L  H  +H+ EKP+
Sbjct: 16 KEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 72 ACNLCTVRYLRSYELVLH 89
           C  C   + +S  L +H
Sbjct: 75 KCQECGKGFCQSRTLAVH 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	134
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-20
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-20
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-19
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-12
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 90.6 bits (226), Expect = 9e-25
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIH--YNLAHCTGEM-YECCHCARSFPCKSYLIP 60
           H   HTG KP+ C +C + + R   L  H   N  +   E  + C  C  +F  +  L  
Sbjct: 26  HNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN-RSEQVFTCSVCQETFRRRMELRL 84

Query: 61  HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
           H+  HTGE PY C+ C+ ++++  +L  H+ K H
Sbjct: 85  HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.8 bits (203), Expect = 3e-21
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLR--- 63
           +G+    C  C +KF     LK+H    H TGE  +EC  C + +  K  L+ H     
Sbjct: 2  SSGSSGVECPTCHKKFLSKYYLKVHNRK-H-TGEKPFECPKCGKCYFRKENLLEHEARNC 59

Query: 64 VHTGEKPYACNLCTVRYLRSYELVLH 89
          ++  E+ + C++C   + R  EL LH
Sbjct: 60 MNRSEQVFTCSVCQETFRRRMELRLH 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.4 bits (176), Expect = 3e-17
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 8   HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH-LRVH 65
           +   + + C+ C + F R  +L++H    H TGEM Y+C  C++ F  K  L  H +++H
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVS-H-TGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

Query: 66  TGEK 69
           +G  
Sbjct: 119 SGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 60.2 bits (147), Expect = 6e-13
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 36 AHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
             +G    EC  C + F  K YL  H R HTGEKP+ C  C   Y R   L+ H
Sbjct: 1  GS-SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 86.3 bits (215), Expect = 2e-23
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHT 66
             + P+ C  C + F+R  KLK H    H TG   Y+C  C  +    S L  HLR+H+
Sbjct: 3  SGSSGPHKCEVCGKCFSRKDKLKTHMRC-H-TGVKPYKCKTCDYAAADSSSLNKHLRIHS 60

Query: 67 GEKPYACNLCTVRYLRSYELVLH 89
           E+P+ C +C      S +L +H
Sbjct: 61 DERPFKCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 79.8 bits (198), Expect = 6e-21
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH 61
          +H+  HTG KPY C  CD     +S L  H  + H + E  ++C  C  +    S L  H
Sbjct: 26 THMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-H-SDERPFKCQICPYASRNSSQLTVH 83

Query: 62 LRVHTGEKPYAC 73
          LR HTG+   + 
Sbjct: 84 LRSHTGDSGPSS 95

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.0 bits (222), Expect = 2e-23
 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH 61
          +   L  G KPYAC EC + F+R+  L  H    H TGE  Y+C  C +SF  K  L  H
Sbjct: 11 AQAALEPGEKPYACPECGKSFSRSDHLAEHQRT-H-TGEKPYKCPECGKSFSDKKDLTRH 68

Query: 62 LRVHTGEKPYACNLC 76
           R HTGEKPY C  C
Sbjct: 69 QRTHTGEKPYKCPEC 83

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.9 bits (219), Expect = 5e-23
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH 61
           +H   HTG KPYAC EC + F++ + L+ H    H TGE  Y+C  C +SF  +  L  H
Sbjct: 95  AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-H-TGEKPYKCPECGKSFSREDNLHTH 152

Query: 62  LRVHTGEKPYACNLC 76
            R HTGEKPY C  C
Sbjct: 153 QRTHTGEKPYKCPEC 167

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.5 bits (218), Expect = 8e-23
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH 61
            H   HTG KPY C EC + F+    L  H    H TGE  Y+C  C +SF  ++ L  H
Sbjct: 39  EHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-H-TGEKPYKCPECGKSFSQRANLRAH 96

Query: 62  LRVHTGEKPYACNLCTVRYLRSYELVLH 89
            R HTGEKPYAC  C   + +   L  H
Sbjct: 97  QRTHTGEKPYACPECGKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.2 bits (186), Expect = 3e-18
 Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 7/73 (9%)

Query: 3   SHLMLH----TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSY 57
           +HL  H    TG KPY C EC + F+R   L  H    H TGE  Y+C  C +SF  +  
Sbjct: 119 AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT-H-TGEKPYKCPECGKSFSRRDA 176

Query: 58  LIPHLRVHTGEKP 70
           L  H R HTG+K 
Sbjct: 177 LNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.9 bits (110), Expect = 4e-07
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 51 SFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
          S    S  +    +  GEKPYAC  C   + RS  L  H
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH 40

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 85.3 bits (212), Expect = 4e-23
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-----YECCHCARSFPCKSY 57
          S    HTG KPYAC+ CD+ F +   L +H+   +          + C  C ++F  ++ 
Sbjct: 5  SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR-Y-HDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 58 LIPHLRVHTGEKPYACNLC 76
          +  H     G         
Sbjct: 63 MARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 7/55 (12%)

Query: 3  SHLMLHTG----AKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSF 52
           H   +         + C++C + F R + +  H +   C G    E  +   S 
Sbjct: 33 MHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN--CAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 58  LIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARN-PY 102
                R HTGEKPYAC+ C   + +   L +H K+ H  +     +
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAF 48

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 84.8 bits (211), Expect = 1e-22
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
            +     K + C  C + F ++  L IH    H T E  Y C  C ++F  + +L  H 
Sbjct: 8  GRLPSKTKKEFICKFCGRHFTKSYNLLIHERT-H-TDERPYTCDICHKAFRRQDHLRDHR 65

Query: 63 RVHTGEKPYACNLCTVRYLRSYELVLH 89
           +H+ EKP+ C  C   + +S  L +H
Sbjct: 66 YIHSKEKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 82.5 bits (205), Expect = 8e-22
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
           H   HT  +PY C  C + F R   L+ H  + H + E  ++C  C + F     L  H 
Sbjct: 36  HERTHTDERPYTCDICHKAFRRQDHLRDHRYI-H-SKEKPFKCQECGKGFCQSRTLAVHK 93

Query: 63  RVHTGEKPYACN 74
            +H         
Sbjct: 94  TLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 2e-06
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 55 KSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
           S           +K + C  C   + +SY L++H
Sbjct: 2  SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH 36

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 83.7 bits (208), Expect = 2e-22
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHT 66
           +G+   AC  C + F     L  H    H +GE  Y C  C   F  K  +  H+R H 
Sbjct: 2  SSGSSGVACEICGKIFRDVYHLNRHKLS-H-SGEKPYSCPVCGLRFKRKDRMSYHVRSHD 59

Query: 67 GE--KPYACNLCTVRYLRSYELVLHLKKCH 94
          G   KPY C  C   + R   L  H+K+ H
Sbjct: 60 GSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 71.0 bits (175), Expect = 2e-17
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM---YECCHCARSFPCKSYLIP 60
          H + H+G KPY+C  C  +F R  ++  H    H  G +   Y C  C + F    +L  
Sbjct: 26 HKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-H-DGSVGKPYICQSCGKGFSRPDHLNG 83

Query: 61 HL-RVHTGEK 69
          H+ +VH+G  
Sbjct: 84 HIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 58.3 bits (142), Expect = 2e-12
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 36 AHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
             +G     C  C + F    +L  H   H+GEKPY+C +C +R+ R   +  H
Sbjct: 1  GS-SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH 54

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 81.7 bits (203), Expect = 2e-21
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
          H+ +H G +PY C  C +KF     L  H  + H TG   YEC  CA+ F  +     H 
Sbjct: 28 HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-H-TGIKPYECNICAKRFMWRDSF--HR 83

Query: 63 RVHTGEKPYACNLC 76
           V +  K Y     
Sbjct: 84 HVTSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 79.8 bits (198), Expect = 1e-20
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHT 66
           +G K Y C +C + F   S+   H ++ H  G   Y C  C + F  K +L+ H+++HT
Sbjct: 5  SSGDKLYPC-QCGKSFTHKSQRDRHMSM-H-LGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 67 GEKPYACNLC 76
          G KPY CN+C
Sbjct: 62 GIKPYECNIC 71

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.7 bits (120), Expect = 4e-09
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 9/58 (15%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKL--KIHYNLAHCTGEM-YECCHCARSFPCKSYL 58
           H+ +HTG KPY C  C ++F         +       +    YE     ++    S  
Sbjct: 56  HMKIHTGIKPYECNICAKRFMWRDSFHRHVT------SCTKSYEAAKAEQNTTEASGP 107

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 80.7 bits (200), Expect = 2e-21
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 8  HTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YEC--CHCARSFPCKSYLIPHL 62
           +G+    C    C + F+    L  H    H   +  + C    C +SF  K +L  H+
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH-IHQKSFSCPEPACGKSFNFKKHLKEHM 60

Query: 63 RVHTGEKPYACNLC 76
          ++H+  + Y C   
Sbjct: 61 KLHSDTRDYICEFS 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.1 bits (196), Expect = 6e-21
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM---YECCHCARSFPCKSYLI 59
          S    H+G KPY C  C  +F ++  +K+H  L     E    + C HC      KS L 
Sbjct: 5  SSGRTHSGEKPYECYICHARFTQSGTMKMHI-LQK-HTENVAKFHCPHCDTVIARKSDLG 62

Query: 60 PHLR-VHTGEKPYA 72
           HLR  H+   P +
Sbjct: 63 VHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 58  LIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY 102
                R H+GEKPY C +C  R+ +S  + +H+ + H E+    +
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA-KF 46

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 80.3 bits (199), Expect = 7e-21
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 7/92 (7%)

Query: 3   SHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLI 59
            H   HTG KPY C   +C+++F+R+ +LK H    H TG   ++C  C R F    +L 
Sbjct: 26  MHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-H-TGVKPFQCKTCQRKFSRSDHLK 83

Query: 60  PHLRVHTGEKPYACNL--CTVRYLRSYELVLH 89
            H R HTGEKP++C    C  ++ RS ELV H
Sbjct: 84  THTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 70.6 bits (174), Expect = 4e-17
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)

Query: 9  TGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEM-YEC--CHCARSFPCKSYLIPHLR 63
          +  +P+ C    C++++ + S L++H    H TGE  Y+C    C R F     L  H R
Sbjct: 2  SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KH-TGEKPYQCDFKDCERRFSRSDQLKRHQR 59

Query: 64 VHTGEKPYACNLCTVRYLRSYELVLH 89
           HTG KP+ C  C  ++ RS  L  H
Sbjct: 60 RHTGVKPFQCKTCQRKFSRSDHLKTH 85

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.8 bits (146), Expect = 7e-13
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YEC--CHCARSFPCKSYLI 59
            H   HTG KP+ C  C +KF+R+  LK H    H TGE  + C    C + F     L+
Sbjct: 56  RHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT-H-TGEKPFSCRWPSCQKKFARSDELV 113

Query: 60  PHLRVH 65
            H  +H
Sbjct: 114 RHHNMH 119

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 78.7 bits (195), Expect = 1e-20
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
             +H+G KPY C EC + F+R+S L  H  + H TGE  Y+C  C ++F   S LI H 
Sbjct: 5  SSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-H-TGEKPYKCLECGKAFSQNSGLINHQ 62

Query: 63 RVHTGEKPYA 72
          R+HT      
Sbjct: 63 RIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 57.1 bits (139), Expect = 3e-12
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 30 KIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVL 88
           IH      +GE  Y C  C ++F   S L+ H RVHTGEKPY C  C   + ++  L+ 
Sbjct: 7  GIH------SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 89 H 89
          H
Sbjct: 61 H 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 58 LIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                +H+GEKPY C  C   + RS  LV H
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH 33

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 77.9 bits (193), Expect = 2e-20
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
                  + Y C EC + F+ +S L  H    H TGE  Y+C  C ++F  +S+LI H 
Sbjct: 9  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-H-TGEKPYKCDECGKAFIQRSHLIGHH 66

Query: 63 RVHTGEKPY 71
          RVHTG  P 
Sbjct: 67 RVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.3 bits (137), Expect = 5e-12
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               Y+C  C +SF   S L  H R HTGEKPY C+ C   +++   L+ H
Sbjct: 14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 76.7 bits (190), Expect = 5e-20
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 1  MESHLM----LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCK 55
          M  H      +    KPY C  C   F     L  H  + H TGE  Y C  C   F   
Sbjct: 1  MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV-H-TGEKPYRCNICGAQFNRP 58

Query: 56 SYLIPHLRVHTGEKPY 71
          + L  H R+H+GEKPY
Sbjct: 59 ANLKTHTRIHSGEKPY 74

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 77.3 bits (191), Expect = 2e-19
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 3   SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAH--------CTGEMYECCHCARSFPC 54
           S   +           CD+ F+   +L  H  + H              EC    +SF  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 55  KSYLIPHLRVHTGEKPYACNL--CTVRYLRSYELVLHL 90
           K  L+ H+RVHTGEKP+ C    C   + RS  L +H 
Sbjct: 75  KYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 73.5 bits (181), Expect = 7e-18
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 4   HLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSYL 58
           H+ +HTG KP+ C    C + F R+  LKIH    H TGE  ++C    C R F   S  
Sbjct: 81  HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-H-TGEKPFKCEFEGCDRRFANSSDR 138

Query: 59  IPHLRVHTGEKPYACN 74
             H+ VHT +K    +
Sbjct: 139 KKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 7/49 (14%), Positives = 13/49 (26%)

Query: 48 CARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE 96
             S       +    +   +       C   +   +ELV H+   H  
Sbjct: 3  SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG 51

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 75.2 bits (186), Expect = 3e-19
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 5/83 (6%)

Query: 12 KPYAC--TECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGE 68
          +PYAC    CD++F+++  L  H  + H TG+  ++C  C R+F    +L  H+R HTGE
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRI-H-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

Query: 69 KPYACNLCTVRYLRSYELVLHLK 91
          KP+AC++C  ++ RS E   H K
Sbjct: 61 KPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 73.3 bits (181), Expect = 2e-18
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPH 61
           H+ +HTG KP+ C  C + F+R+  L  H    H TGE  + C  C R F        H
Sbjct: 24 RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-H-TGEKPFACDICGRKFARSDERKRH 81

Query: 62 LRVHTGEK 69
           ++H  +K
Sbjct: 82 TKIHLRQK 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 74.1 bits (183), Expect = 9e-19
 Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSYLIPHLRV 64
           T         C + + ++S LK H    H TGE  Y C    C   F     L  H R 
Sbjct: 2  RTATHTCDYAGCGKTYTKSSHLKAHLRT-H-TGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 65 HTGEKPYACNLCTVRYLRSYELVLHLK 91
          HTG +P+ C  C   + RS  L LH+K
Sbjct: 60 HTGHRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.8 bits (133), Expect = 3e-11
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 3  SHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLI 59
          +HL  HTG KPY C    C  KF R+ +L  HY   H TG   ++C  C R+F    +L 
Sbjct: 25 AHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-H-TGHRPFQCQKCDRAFSRSDHLA 82

Query: 60 PHLRVH 65
           H++ H
Sbjct: 83 LHMKRH 88

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.5 bits (184), Expect = 1e-18
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 1  MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSY 57
          M  HL  H G + + C EC + F  +SKLK H  L H TGE  ++C    C + F     
Sbjct: 23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVH-TGEKPFQCTFEGCGKRFSLDFN 79

Query: 58 LIPHLRVHTGEKPYAC 73
          L  H+R+HTG++PY C
Sbjct: 80 LRTHVRIHTGDRPYVC 95

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 69.1 bits (170), Expect = 2e-16
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)

Query: 3   SHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSY 57
            H ++HTG KP+ CT   C ++F+ +  L+ H  + H TG+  Y C    C + F   + 
Sbjct: 52  RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-H-TGDRPYVCPFDGCNKKFAQSTN 109

Query: 58  LIPHLRVHTGEKPY 71
           L  H+  H   K  
Sbjct: 110 LKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.5 bits (166), Expect = 9e-16
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 12 KPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGE 68
          +  AC    C + F  NS ++ H +  H  G   + C  C ++F   S L  H  VHTGE
Sbjct: 4  RTIACPHKGCTKMFRDNSAMRKHLHT-H--GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60

Query: 69 KPYACNL--CTVRYLRSYELVLH 89
          KP+ C    C  R+   + L  H
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTH 83

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.7 bits (187), Expect = 3e-18
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 4   HLMLHTGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEM---YECC--HCARSFPCKS 56
           H + HTG K + C    CD +F   + +K H+N           Y C   +C ++F   +
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-F-HNIKICVYVCHFENCGKAFKKHN 120

Query: 57  YLIPHLRVHTGEKPYACN 74
            L  H   HT + PY C 
Sbjct: 121 QLKVHQFSHTQQLPYECP 138

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.2 bits (183), Expect = 9e-18
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 4  HLMLHTGAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEM-YEC--CHCARSFPCKSYL 58
             L    K Y C   +C   +N+N KL+ H    H TGE  + C    C + F    +L
Sbjct: 3  EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-H-TGEKPFPCKEEGCEKGFTSLHHL 60

Query: 59 IPHLRVHTGEKPYACN 74
            H   HTGEK + C+
Sbjct: 61 TRHSLTHTGEKNFTCD 76

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 9/100 (9%)

Query: 4   HLMLHTGAK--PYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKS 56
           H       K   Y C    C + F ++++LK+H    H T ++ YEC H  C + F   S
Sbjct: 93  HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS-H-TQQLPYECPHEGCDKRFSLPS 150

Query: 57  YLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE 96
            L  H +VH G      + C+         + H+ +CH++
Sbjct: 151 RLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.4 bits (176), Expect = 7e-18
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHT 66
           +   P  C+EC    +  + L+IH  + H   +  ++C +C+      S L  H++   
Sbjct: 4  GSSGHPEKCSECSYSCSSKAALRIHERI-H-CTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 67 GEKPYAC 73
          G+     
Sbjct: 62 GDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 5/27 (18%), Positives = 9/27 (33%)

Query: 63 RVHTGEKPYACNLCTVRYLRSYELVLH 89
             +   P  C+ C+        L +H
Sbjct: 2  SSGSSGHPEKCSECSYSCSSKAALRIH 28

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 70.5 bits (174), Expect = 2e-17
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 14 YACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYA 72
          + C  C + F R+S L  H  L H +    Y C +C + F  KS +  H  +HTGEKP+ 
Sbjct: 2  FDCKICGKSFKRSSTLSTH-LLIH-SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 73 CNLCTVRYLRSYELVLH 89
          C +C   + +S  L+ H
Sbjct: 60 CQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 65.5 bits (161), Expect = 1e-15
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL 62
          HL++H+  +PY C  C ++F++ S +K H  + H TGE  ++C  C ++F   S LI H 
Sbjct: 20 HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-H-TGEKPHKCQVCGKAFSQSSNLITHS 77

Query: 63 RVHTG 67
          R HTG
Sbjct: 78 RKHTG 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 70.2 bits (173), Expect = 3e-17
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 4/79 (5%)

Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHLRVHTGEKP 70
          KP+ C  C + F+R+  L  H    H TGE  + C  C R F        H  +     P
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRT-H-TGEKPFACDICGRKFARSDERKRHRDIQH-ILP 58

Query: 71 YACNLCTVRYLRSYELVLH 89
             +       ++Y L   
Sbjct: 59 ILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.8 bits (164), Expect = 6e-16
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYL---I 59
          +H+  HTG KP+AC  C +KF R+ + K H ++                     +L   +
Sbjct: 21 THIRTHTGEKPFACDICGRKFARSDERKRHRDI-Q-HILPILEDKVEELLSKNYHLENEV 78

Query: 60 PHLRVHTGEK 69
            L+   GE+
Sbjct: 79 ARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.0 bits (136), Expect = 9e-12
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE 96
          ++C  C R+F    +L  H+R HTGEKP+AC++C  ++ RS E   H +     
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQHI 56

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 70.3 bits (173), Expect = 1e-16
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 9/87 (10%)

Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHC-TGE-MYECCHC-----ARSFPCKSYLIPHLRV 64
                 C Q+F+   +L  H N  H       + C         R F  +  L+ H+R 
Sbjct: 2  TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 65 HTGEKPYACNL--CTVRYLRSYELVLH 89
          HTGEKP+ C    C   Y R   L  H
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTH 88

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 69.5 bits (171), Expect = 3e-16
 Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 3   SHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YEC--CHCARSFPCKSY 57
            H+  HTG KP+ CT   C + ++R   LK H   +H TGE  Y C    C+++F   S 
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SH-TGEKPYMCEHEGCSKAFSNASD 114

Query: 58  LIPH-LRVHTGEKPYACNL--CTVRYLRSYELVLHLK 91
              H  R H+ EKPY C L  CT RY     L  H+K
Sbjct: 115 RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.8 bits (169), Expect = 6e-16
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 8   HTGAKPYACTECDQK-----FNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSYLI 59
           H   K + C           F     L +H    H TGE  ++C    C +S+     L 
Sbjct: 29  HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-H-TGEKPHKCTFEGCRKSYSRLENLK 86

Query: 60  PHLRVHTGEKPYACN--LCTVRYLRSYELVLHLKKCH 94
            HLR HTGEKPY C    C+  +  + +   H  + H
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 3   SHLMLHTGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEM-YEC--CHCARSFPCKSY 57
           +HL  HTG KPY C    C + F+  S    H N  H + E  Y C    C + +   S 
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH-SNEKPYVCKLPGCTKRYTDPSS 145

Query: 58  LIPHLRVHTG 67
           L  H++   G
Sbjct: 146 LRKHVKTVHG 155

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 1e-15
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGE-MYECCHCARSFPCKSYLIPHLRVHT 66
            G   Y C  C + +   S    HY  +H     +Y C  C + F  K  +  H+++  
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 67 G 67
           
Sbjct: 65 K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 1/40 (2%)

Query: 63  RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY 102
               GE  Y C +C+  Y        H    H+ + +  Y
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVK-VY 41

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.3 bits (160), Expect = 3e-15
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 9/93 (9%)

Query: 2  ESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSYL 58
               +H    P     C + + ++S LK H    H TGE  Y+C    C   F     L
Sbjct: 10 LEKRRIHYCDYPG----CTKVYTKSSHLKAHLRT-H-TGEKPYKCTWEGCDWRFARSDEL 63

Query: 59 IPHLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
            H R HTG KP+ C +C   + RS  L LH+K
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 55.3 bits (134), Expect = 2e-11
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 3  SHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLI 59
          +HL  HTG KPY CT   CD +F R+ +L  HY   H TG   ++C  C RSF    +L 
Sbjct: 35 AHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KH-TGAKPFQCGVCNRSFSRSDHLA 92

Query: 60 PHLRVHT 66
           H++ H 
Sbjct: 93 LHMKRHQ 99

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 60.4 bits (146), Expect = 3e-13
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 7  LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMY--------ECCHCARSFPCKSYL 58
          +           CD+ F+   +L  H  + H  G           EC    +SF  K  L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 59 IPHLRVHTGEKPYAC 73
          + H+RVHTGEK    
Sbjct: 79 VNHIRVHTGEKSGPS 93

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 59.0 bits (144), Expect = 4e-13
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEM-YECCHCARSFPCKSYLIPHL-RVHTGEK 69
          + + C  C + F R   LK HY   H T E  Y C  C R+F  +  LI H  ++H+G  
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRS-H-TNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 57.9 bits (141), Expect = 8e-13
 Identities = 21/52 (40%), Positives = 28/52 (53%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
          + C  C R+F  + +L  H R HT EKPY C LC   + R   L+ H +K H
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 3  SHLM----LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYE 44
           HL      HT  KPY C  C++ F R   L  H    H +G + E
Sbjct: 16 EHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH-SGNLGE 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 58.6 bits (142), Expect = 9e-13
 Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 2/69 (2%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNL-AHCTGEM-YECCHCARSFPCKSYLIPHLRVH 65
           +G+    C  C     + + L  H    A     + + C  C + F     +  H    
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 66 TGEKPYACN 74
                A  
Sbjct: 62 HPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 1e-11
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 39  TGEM-YECCHCARSFPCKSYLIPHLRVHT---GEKPYACNLCTVRYLRSYELVLHLKKCH 94
           +G    +C  C  +   K+ L  H R H        + C  C  R+ +   +  H  K H
Sbjct: 3   SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 95  REDARNP 101
                 P
Sbjct: 63  PALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 3/55 (5%)

Query: 1  MESHLMLHT---GAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSF 52
          +  H   H     A  + C  C ++F +   +  H + +H    +        S 
Sbjct: 23 LNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          +GE  + C  C ++F  KSYL+ H + H  EKP   +
Sbjct: 6  SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.4 bits (143), Expect = 1e-12
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 4   HLMLHTGAKPYACTECDQKFNRNSKLKIHYN----LAHCTGEMYECCHCARSFPCKSYLI 59
           +  + TGA  + C +C   ++   +L +H N          E         S P K  L+
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 60  PHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
                   +K   C  C   +    +L +H+ K  
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 56.8 bits (138), Expect = 2e-12
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TG   Y C  CA++F  KS LI H R HTG KP   +
Sbjct: 8  TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG KPY C+ C   +    +L++H
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 57.6 bits (140), Expect = 2e-12
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 14 YACT--ECDQKFNRNSKLKIHYNLAHCTGEM-YECCH--CARSFPCKSYLIPHLRVHTGE 68
          Y C    C + F ++++LK+H    H T ++ YEC H  C + F   S L  H +VH G 
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFS-H-TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59

Query: 69 KPYACNLCTVRYLRSYELVLHLKKCH 94
               + C+         + H+ +CH
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKHVAECH 85

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-12
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C +SF  KS L  H ++HTGEKP   +
Sbjct: 8  TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C++C   + +  +L +H
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 3e-12
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TG+  YEC  C ++F  KS LI H R HTGEKP   +
Sbjct: 8  TGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 8e-05
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG++PY C  C   +     L+ H
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICH 31

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  +EC  C +SF   S LI H R+HTGE P   +
Sbjct: 8  TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP+ C  C   +  + +L++H
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 56.0 bits (136), Expect = 4e-12
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TG+  +EC HC +SF  K  L+ H R+HTGEK    +
Sbjct: 8  TGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG+KP+ C  C   +     LV H
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-12
 Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C++C                              +SF  KS L  H 
Sbjct: 2  SSGSSGTGEKPYKCSDCG-----------------------------KSFTWKSRLRIHQ 32

Query: 63 RVHTGEKPYACN 74
          + HTGE+    +
Sbjct: 33 KCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C+ C   +     L +H
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-12
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
           GE  Y C  C ++F  KSYLI H+R H+GEKP   
Sbjct: 8  AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GEKPY C+ C   +     L++H
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-12
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TGE  +EC  C ++F  KS LI H R HTGEKP   
Sbjct: 8  TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP+ C+ C   +     L++H
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y+C  C ++F  +S L  H   H+GEKP   +
Sbjct: 8  TGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   +     L +H
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.3 bits (134), Expect = 6e-12
 Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KP  CTEC + F                               KS LI H 
Sbjct: 2  SSGSSGTGEKPCKCTECGKAFCW-----------------------------KSQLIMHQ 32

Query: 63 RVHTGEKPYACN 74
          R H  +K    +
Sbjct: 33 RTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP  C  C   +    +L++H
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F  KS L  H R+H GEKP   +
Sbjct: 8  TGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE+ Y C+ C   +++   L +H
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 7e-12
 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F  KS LI H R+HTGEKP   +
Sbjct: 8  TGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE+ Y C+ C   + R   L++H
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMH 31

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-11
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C +SF  KS L  H R+HTGE P   +
Sbjct: 8  TGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 9e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C+ C   +++  +L +H
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F  K  LI H R H GEKP   +
Sbjct: 8  TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE PY C+ C   + R Y+L+ H
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G +P+ C EC + F R                             +S+L  HL
Sbjct: 2  SSGSSGSGERPFKCNECGKGFGR-----------------------------RSHLAGHL 32

Query: 63 RVHTGEKPYACN 74
          R+H+ EK    +
Sbjct: 33 RLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GE+P+ CN C   + R   L  H
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F  +  L  H R+H+G+KP   +
Sbjct: 8  TGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C++C   +     L +H
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-11
 Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC                              + F C+  L  H 
Sbjct: 2  SSGSSGTGEKPYKCEECG-----------------------------KGFICRRDLYTHH 32

Query: 63 RVHTGEKPYACN 74
           VHTGEKP   +
Sbjct: 33 MVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   ++   +L  H
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F   ++LI H RVHTGEKP   +
Sbjct: 8  TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   + ++  L+ H
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG K + CTEC + F R                             KS L  H 
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTR-----------------------------KSTLSMHQ 32

Query: 63 RVHTGEKPYACN 74
          ++HTGEKP   +
Sbjct: 33 KIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG K + C  C   + R   L +H
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C++C + F R                             KS L  H 
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTR-----------------------------KSGLHIHQ 32

Query: 63 RVHTGEKPYACN 74
          + HTGE+    +
Sbjct: 33 QSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C+ C   + R   L +H
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y C  C ++F  +S LI H ++HTGEKP   +
Sbjct: 8  TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE+PY C +C   +     L+ H
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G  PY C++C++ F+                              K  L+ H 
Sbjct: 2  SSGSSGAGVNPYKCSQCEKSFSG-----------------------------KLRLLVHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HT EKP   +
Sbjct: 33 RMHTREKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TGE  +EC  C +SF   S L  H R+HTGEKP   
Sbjct: 8  TGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP+ C  C   +  S +L  H
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATH 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          +GE  Y C  C ++F  KS L  H R HTGEKP   +
Sbjct: 8  SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKPY CN C   + +   L  H
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-11
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  + C  C + F  K+ LI H ++HTGE+P   +
Sbjct: 8  TGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 8e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE P+ C+ C   +     L++H
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-11
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G KP+ C EC ++F +NS                              L  H 
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNS-----------------------------QLHSHQ 32

Query: 63 RVHTGEKPYACN 74
          RVHTGEKP   +
Sbjct: 33 RVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 8e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKP+ C  C  R+ ++ +L  H
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 2e-11
 Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G K + C ECD  F++ S L++H                              
Sbjct: 2  SSGSSGMGEKTWKCRECDMCFSQASSLRLHQ----------------------------- 32

Query: 63 RVHTGEKPYACN 74
           VH GEKP   +
Sbjct: 33 NVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GEK + C  C + + ++  L LH
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-11
 Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG K Y C EC + F+R                                L+ H 
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSR-----------------------------APCLLKHE 32

Query: 63 RVHTGEKPYACN 74
          R+H+GEKP   +
Sbjct: 33 RLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEK Y C  C   + R+  L+ H
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          +GE  Y C +C ++F   + L+ H R+HTGEKP   +
Sbjct: 8  SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKPY C+ C   +  S ELV H
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRH 31

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G +PY C EC + F R                              S+LI HL
Sbjct: 2  SSGSSGSGERPYGCNECGKNFGR-----------------------------HSHLIEHL 32

Query: 63 RVHTGEKPYACN 74
          + H  EK    +
Sbjct: 33 KRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
               +GE+PY CN C   + R   L+ HLK
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLK 33

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-11
 Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +  KPY C +C + +NR                             +  L  H 
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNR-----------------------------RLNLDMHQ 32

Query: 63 RVHTGEKPYACN 74
          RVH GEK    +
Sbjct: 33 RVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               + EKPY C  C   Y R   L +H
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F   + L  H RVH+GEKP   +
Sbjct: 8  TGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 61 HLRVHTGEKPYACNLC 76
               TGEKPY C++C
Sbjct: 3  SGSSGTGEKPYECDVC 18

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y C  C ++F  +S LI H ++HT +KP   +
Sbjct: 8  TGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   +     L+ H
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C+++F  K++L  H + HTGEKP   +
Sbjct: 8  TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C +C+  + +   L  H
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  YEC  C ++F  +S L  H  +HTG+KP   +
Sbjct: 8  TGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 9/16 (56%), Positives = 9/16 (56%)

Query: 61 HLRVHTGEKPYACNLC 76
               TGEKPY CN C
Sbjct: 3  SGSSGTGEKPYECNQC 18

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-11
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G KPY C+EC + F+R++                             +L  H 
Sbjct: 2  SSGSSGSGEKPYKCSECGKAFHRHT-----------------------------HLNEHR 32

Query: 63 RVHTGEKPYACN 74
          R+HTG +P   +
Sbjct: 33 RIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKPY C+ C   + R   L  H
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEH 31

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C +C + +N                              K  L  H 
Sbjct: 2  SSGSSGTGEKPYKCEKCGKGYNS-----------------------------KFNLDMHQ 32

Query: 63 RVHTGEKPYACN 74
          +VHTGE+P   +
Sbjct: 33 KVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   Y   + L +H
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G KPY C EC + + R                             +  L  H 
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKR-----------------------------RLDLDFHQ 32

Query: 63 RVHTGEKPYACN 74
          RVHTGEK    +
Sbjct: 33 RVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKPY C  C   Y R  +L  H
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G KP+ C EC ++F +NS                             +L  H 
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNS-----------------------------HLHSHQ 32

Query: 63 RVHTGEKPYACN 74
          RVHTGEKP   +
Sbjct: 33 RVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKP+ C  C  R+ ++  L  H
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG +P+ C EC + F +++                             +LI H 
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSA-----------------------------HLIQHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE+P+ CN C   +++S  L+ H
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.6 bits (130), Expect = 3e-11
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TG   Y C  C ++F  KSYLI H R HTGE   + 
Sbjct: 8  TGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG KPY CN C   +     L++H
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKSYLIIH 31

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G KPY C EC + F +NS                             +L  H 
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNS-----------------------------HLTNHW 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKPY CN C   + ++  L  H
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNH 31

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 17/72 (23%), Positives = 22/72 (30%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G K + C EC + F +                              S L  H 
Sbjct: 2  SSGSSGAGKKLFKCNECKKTFTQ-----------------------------SSSLTVHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                G+K + CN C   + +S  L +H
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          +GE  ++C  C + F   S    H R H+GEKP   +
Sbjct: 8  SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKP+ C  C   +  + +   H
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 3e-11
 Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F RNS                             +L  H 
Sbjct: 2  SSGSSGTGEKPYKCHECGKVFRRNS-----------------------------HLARHQ 32

Query: 63 RVHTGEKPYACN 74
           +HTGEKP   +
Sbjct: 33 LIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C+ C   + R+  L  H
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARH 31

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +NS                             +L  H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLANHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTG KP   +
Sbjct: 33 RIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   + ++  L  H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.6 bits (130), Expect = 3e-11
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TGE  YEC  C ++F  KS L+ H R HTGE   + 
Sbjct: 8  TGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   +     L++H
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G KPY C+EC + F+                                 L  H 
Sbjct: 2  SSGSSGEGEKPYQCSECGKSFSG-----------------------------SYRLTQHW 32

Query: 63 RVHTGEKPYACN 74
            HT EKP   +
Sbjct: 33 ITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GEKPY C+ C   +  SY L  H
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y C  C +SF   S L+ H RVH+GEKP   +
Sbjct: 8  TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   +  +  L+ H
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          +GE  YEC  C ++F  K  LI H R H GE   + 
Sbjct: 6  SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG K Y C EC + F+RNS                              L  H 
Sbjct: 2  SSGSSGTGEKRYKCNECGKVFSRNS-----------------------------QLSQHQ 32

Query: 63 RVHTGEKPYACN 74
          ++HTGEKP   +
Sbjct: 33 KIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEK Y CN C   + R+ +L  H
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQH 31

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G K Y C  C ++F+++S                             +L  H 
Sbjct: 2  SSGSSGMGEKCYKCDVCGKEFSQSS-----------------------------HLQTHQ 32

Query: 63 RVHTGEKPYACN 74
          RVHTGEKP   +
Sbjct: 33 RVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GEK Y C++C   + +S  L  H
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F  NS                             YL  H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNS-----------------------------YLSRHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   +  +  L  H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 3e-11
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +NS                             +L+ H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLVRHR 32

Query: 63 RVHTGEKPYACN 74
           +HTGEKP   +
Sbjct: 33 GIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   + ++  LV H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRH 31

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y C  C ++F   S L  H R+HTGEKP   +
Sbjct: 8  TGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   ++   +L  H
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEH 31

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C  C + F  +S                             +L+ H 
Sbjct: 2  SSGSSGTGEKPYKCQVCGKAFRVSS-----------------------------HLVQHH 32

Query: 63 RVHTGEKPYACN 74
           VH+GE+P   +
Sbjct: 33 SVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C +C   +  S  LV H
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +                             K+ L  H 
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQ-----------------------------KANLTQHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   + +   L  H
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KP+ C EC + +N+                             + +L  H 
Sbjct: 2  SSGSSGTGEKPFKCGECGKSYNQ-----------------------------RVHLTQHQ 32

Query: 63 RVHTGEKPYACN 74
          RVHTGEKP   +
Sbjct: 33 RVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP+ C  C   Y +   L  H
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQH 31

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +                             KS+L  H 
Sbjct: 2  SSGSSGTGEKPYICNECGKSFIQ-----------------------------KSHLNRHR 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   +++   L  H
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRH 31

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.0 bits (128), Expect = 5e-11
 Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F  NS                                 H 
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNS-----------------------------SCTQHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTG++P   +
Sbjct: 33 RLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   +  +     H
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          +GE  YEC  C ++F  KS LI H R H G    + 
Sbjct: 8  SGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKPY CN C   ++    L++H
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVH 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-11
 Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F                                S L  H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRA-----------------------------HSNLTTHQ 32

Query: 63 RVHTGEKPYACN 74
           +HTGEKP   +
Sbjct: 33 VIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 9/16 (56%), Positives = 9/16 (56%)

Query: 61 HLRVHTGEKPYACNLC 76
               TGEKPY CN C
Sbjct: 3  SGSSGTGEKPYKCNEC 18

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +NS                             +L  H 
Sbjct: 2  SSGSSGTGKKPYKCNECGKVFTQNS-----------------------------HLARHR 32

Query: 63 RVHTGEKPYACN 74
           +HTGEKP   +
Sbjct: 33 GIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG+KPY CN C   + ++  L  H
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARH 31

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +NS                             +L  H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLARHR 32

Query: 63 RVHTGEKPYACN 74
           +HTGEKP   +
Sbjct: 33 GIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   + ++  L  H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-11
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G KP+ C EC + F +N                              +L  HL
Sbjct: 2  SSGSSGSGEKPFKCKECGKAFRQNI-----------------------------HLASHL 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               +GEKP+ C  C   + ++  L  H
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASH 31

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-11
 Identities = 17/72 (23%), Positives = 21/72 (29%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KP+ C  C + F                               +S L  H 
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCG-----------------------------RSRLNRHS 32

Query: 63 RVHTGEKPYACN 74
           VHT EKP   +
Sbjct: 33 MVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 2e-04
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 61 HLRVHTGEKPYACNLC 76
               TGEKP+ C++C
Sbjct: 3  SGSSGTGEKPFKCDIC 18

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-11
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y+C  C +SF   S L  H R+HTGEKP   +
Sbjct: 8  TGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C++C   +     L +H
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-11
 Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F++ S                              L  H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTS-----------------------------KLARHQ 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   + ++ +L  H
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 7e-11
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G + + C++C + F +                              S  I H 
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQ-----------------------------ASNFIQHR 32

Query: 63 RVHTGEKPYACN 74
          R+HTGEKP   +
Sbjct: 33 RIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 6/29 (20%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GE+ + C+ C   +L++   + H
Sbjct: 3  SGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-11
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TG   Y C  C ++F   S L  H  +HTGEKP   +
Sbjct: 8  TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG KPY CN C   +     L  H
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSSLTTH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 8e-11
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TGE  YECC C + F  K  L+ H + H+G+   + 
Sbjct: 8  TGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGE PY C  C   + R  +LV H
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSH 31

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-11
 Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KPY C EC + F +NS                             +L  H 
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLARHR 32

Query: 63 RVHTGEKPYACN 74
          RVHTG KP   +
Sbjct: 33 RVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY CN C   + ++  L  H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 53.5 bits (128), Expect = 8e-11
 Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 8/69 (11%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
             +H G +   C++C   F R S L           +   C  C +    ++ L     
Sbjct: 9  RQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALNKDEG 60

Query: 64 VHTGEKPYA 72
            +G+K   
Sbjct: 61 NESGKKTSG 69

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-11
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          +G+  YEC  C ++F    +L  H RVHTGE+    +
Sbjct: 8  SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TGE  Y C  C ++F  +S L  H ++HTGEKP   
Sbjct: 8  TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY C  C   +     L  H
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.2 bits (126), Expect = 1e-10
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 28/74 (37%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +  KPY C  C + F+R   L  H                              
Sbjct: 2  SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIK---------------------------- 33

Query: 63 RVHTGEKPYACNLC 76
          +VHT E+P+ C + 
Sbjct: 34 QVHTSERPHKCQVW 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 34.5 bits (80), Expect = 7e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
               +  KPY C  C   + R   L  H+K+ H
Sbjct: 3  SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-10
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TG   Y+C  C ++F   S L  H RVHTGEKP   +
Sbjct: 8  TGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TG KPY CN C   + ++ +L  H
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     TG KP+ C EC + F+R                             +S L  H 
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSR-----------------------------RSALNVHH 32

Query: 63 RVHTGEKPYACN 74
          ++HTGEKP   +
Sbjct: 33 KLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP+ C  C   + R   L +H
Sbjct: 3  SGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  ++C  C ++F     L  H R+HTGEKP   +
Sbjct: 8  TGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKP+ C  C   +     L  H
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-10
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYACN 74
          TGE  Y C  C ++F   ++L  HLRVHT E     +
Sbjct: 8  TGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               TGEKPY+CN+C   ++ S  L  H
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 29/71 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +  K + C EC + F                               KS+L  H 
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTL-----------------------------KSHLNQHQ 32

Query: 63 RVHTGEKPYAC 73
          R+HTGEKP   
Sbjct: 33 RIHTGEKPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLR-VHTGEKPYACN 74
          TG+  YEC  C ++F   + LI H R  HTGEKP   +
Sbjct: 8  TGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH 94
               TG+KPY C  C   ++++  L+ H +  H
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-10
 Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          TGE  ++C  C  +F     L  HLR H    P   
Sbjct: 8  TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
               TGEKP+ C  C + +  S  L  HL+
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.3 bits (121), Expect = 7e-10
 Identities = 17/72 (23%), Positives = 22/72 (30%), Gaps = 29/72 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     +G K + C EC + F   S L+IH                              
Sbjct: 2  SSGSSGSGEKSHTCDECGKNFCYISALRIHQ----------------------------- 32

Query: 63 RVHTGEKPYACN 74
          RVH GEK    +
Sbjct: 33 RVHMGEKCSGPS 44

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 49.9 bits (120), Expect = 9e-10
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYA 72
          +G+  YEC  C +SF  K  L  H R+HTG  P +
Sbjct: 6  SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.5 bits (119), Expect = 1e-09
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYA 72
           GE  Y C  C ++F  K  LI H+RVHTG  P +
Sbjct: 7  GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GEKPY C+ C   + +   L++H
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 50.4 bits (121), Expect = 1e-09
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 7/69 (10%)

Query: 3  SHLMLH--TGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGE-MYECCHCARSFPCKSY 57
          ++L+ +     +PYAC    CD++F+R+ +L  H    H TG+  ++C  C R+F    +
Sbjct: 7  NNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IH-TGQKPFQCRICMRNFSRSDH 64

Query: 58 LIPHLRVHT 66
          L  H+R HT
Sbjct: 65 LTTHIRTHT 73

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 16/70 (22%), Positives = 19/70 (27%), Gaps = 29/70 (41%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
                 G KPY C  C  +F     LK H                             L
Sbjct: 1  GSSGSSGGEKPYPCEICGTRFRHLQTLKSH-----------------------------L 31

Query: 63 RVHTGEKPYA 72
          R+HTG  P +
Sbjct: 32 RIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHL 90
                GEKPY C +C  R+     L  HL
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 48.8 bits (117), Expect = 2e-09
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 31/74 (41%)

Query: 3  SHLMLHTGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIP 60
          S     TG KP+ACT   C  +F+R+ +L  H                            
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHR--------------------------- 34

Query: 61 HLRVHTGEKPYACN 74
            R H+G KP   +
Sbjct: 35 --RSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.4 bits (103), Expect = 3e-07
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 61 HLRVHTGEKPYACN--LCTVRYLRSYELVLHLKK 92
               TGEKP+AC    C  R+ RS EL  H + 
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 29/69 (42%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR 63
                G KPY C  C  +F + + L+ H                               
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHV-----------------------------L 32

Query: 64 VHTGEKPYA 72
          +HTG  P +
Sbjct: 33 IHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
                GEKPY C  C  R+++   L  H
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAH 30

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 47.8 bits (114), Expect = 1e-08
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 42 MYECCH--CARSFPCKSYLIPHLRVHTGEKPYACNL--CTVRYLRSYELVLHLKK 92
           + C H  C +++   S+L  H R HTGEKP++C+   C  R+ RS EL  H + 
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 3  SHLMLHTGAKPYACT--ECDQKFNRNSKLKIHY 33
          +H   HTG KP++C+   C+++F R+ +L  H 
Sbjct: 37 AHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.8 bits (109), Expect = 3e-08
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYAC 73
          +GE  Y C  C  +F   + L+ H ++HT +   + 
Sbjct: 6  SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.3 bits (108), Expect = 5e-08
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEKPYA 72
           GE  Y C  C +SF  +  L  H R  +   P +
Sbjct: 7  GGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.2 bits (104), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 36 AHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT 77
          +  T +   C  C + F    +L  H   H+GEKPY+    +
Sbjct: 6  SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 13/71 (18%), Positives = 20/71 (28%), Gaps = 29/71 (40%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S     T +K Y C EC + F R                               +L  H 
Sbjct: 2  SSGSSGTDSKSYNCNECGKAFTR-----------------------------IFHLTRHQ 32

Query: 63 RVHTGEKPYAC 73
          ++HT +   + 
Sbjct: 33 KIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLH 89
               T  K Y CN C   + R + L  H
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRH 31

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 41.6 bits (98), Expect = 1e-06
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
            R  TG KP+ C  C   + RS  L LH K
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.0 bits (94), Expect = 4e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIH 32
               TG KP+ C +CD+ F+R+  L +H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALH 30

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 1e-06
 Identities = 16/54 (29%), Positives = 20/54 (37%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE 96
          Y C  C       S L  H+R HT  +PY C  C   +     L  H+K     
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 1e-06
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 14 YACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
          Y C EC  +  + S LK H    H     Y C +C  SF  K  L  H++     K
Sbjct: 2  YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.8 bits (93), Expect = 6e-06
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 29/68 (42%)

Query: 3  SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL 62
          S      G  P+ C++CD+ F +                             ++YL+ H 
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQ-----------------------------RNYLVQHE 32

Query: 63 RVHTGEKP 70
          R H  +  
Sbjct: 33 RTHARKSG 40

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 9e-06
 Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 4/92 (4%)

Query: 10  GAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK 69
             + Y C  C+ K +   +   H  L         C +C+  F        H       K
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEH-ESKCEYK 68

Query: 70  PYACNLCTVRYLRSYELVLHLKKCHREDARNP 101
              C  C   +  S+ +  H  + H ++   P
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVEVHNQNNMAP 100

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 36.5 bits (83), Expect = 6e-04
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 34  NLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKC 93
            LA      + C  C   F     L  H+R    E    C +C   +  +   + H+ K 
Sbjct: 66  LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123

Query: 94  HR 95
           H 
Sbjct: 124 HN 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	134
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.95
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.91
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.9
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.9
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.89
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.89
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.83
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.82
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.81
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.79
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.79
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.74
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.74
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.73
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.71
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.71
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.71
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.69
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.68
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.68
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.68
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.67
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.67
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.65
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.64
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.64
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.64
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.64
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.63
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.61
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.58
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.58
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.54
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.53
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.51
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.5
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.48
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.47
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.47
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.46
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.46
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.45
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.44
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.44
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.43
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.41
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.41
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.39
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.38
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.36
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.36
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.35
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.35
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.35
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.35
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.34
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.34
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.34
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.3
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.28
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.28
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.28
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.28
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.28
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.28
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.27
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.27
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.25
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.24
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.23
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.22
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.2
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.19
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.18
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.18
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.18
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.17
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.14
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.14
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.06
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.04
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.99
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.98
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.98
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.98
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.96
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.96
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.91
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.9
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.86
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.78
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.77
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.72
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.71
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.71
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.7
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.68
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.67
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.66
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.65
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.65
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.63
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.62
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.62
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.6
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.6
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.57
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.57
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.57
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.57
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.56
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.53
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.94
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.52
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.91
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.51
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.48
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.43
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.8
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.42
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.42
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.41
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.39
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.37
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.37
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.34
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.32
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.65
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.64
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.28
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.27
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.26
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.52
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.18
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.03
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.99
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.36
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.32
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.07
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.05
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.64
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.2
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.29
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.02
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.8
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.58
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.4
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.14
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	88.88
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	88.44
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	88.35
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.92
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.52
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	87.29
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	86.28
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.47
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	84.51
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	84.01
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	83.35
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	82.7
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	81.36
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.52

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.95  E-value=1.6e-28  Score=145.73  Aligned_cols=97  Identities=27%  Similarity=0.565  Sum_probs=91.2

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCH
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRS   83 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~   83 (134)
                      |..+|.|+++|.|++|++.|.....|..|+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|++.|.+.
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHH-HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHH-cCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            44678999999999999999999999999997 99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCC
Q psy12639         84 YELVLHLKKCHREDARNP  101 (134)
Q Consensus        84 ~~l~~H~~~~~~~~~~~~  101 (134)
                      +.|..|+++++++.|..+
T Consensus        92 ~~L~~H~~~hh~~~p~~~  109 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGD  109 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSS
T ss_pred             HHHHHHhHHhcCCCCCCC
Confidence            999999999998766443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=6.1e-27  Score=146.62  Aligned_cols=115  Identities=31%  Similarity=0.587  Sum_probs=70.0

Q ss_pred             hhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhc
Q psy12639          2 ESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYL   81 (134)
Q Consensus         2 ~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   81 (134)
                      ..|+++|.++++|.|+.|++.|.+...|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.
T Consensus        66 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  144 (190)
T 2i13_A           66 TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFS  144 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             HHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh-cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccC
Confidence            4555555555566666666666666666666554 555556666666666666666666666666666666666666666


Q ss_pred             CHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhhhhh
Q psy12639         82 RSYELVLHLKKCHREDARNPY--APAFVDVNTVAQVKQ  117 (134)
Q Consensus        82 ~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  117 (134)
                      +...|..|+++|+++++|.|.  +..|.....|..|..
T Consensus       145 ~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          145 REDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             CHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             CHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            666666666666666666666  556666666666554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.93  E-value=6.1e-26  Score=142.07  Aligned_cols=118  Identities=31%  Similarity=0.571  Sum_probs=91.7

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhh
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRY   80 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f   80 (134)
                      |..|+++|.++++|.|+.|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|
T Consensus        37 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (190)
T 2i13_A           37 LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF  115 (190)
T ss_dssp             HHHGGGCC---CCEECTTTCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred             HHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHh-cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCcc
Confidence            45677777777888888888888888888888876 77777888888888888888888888888888888888888888


Q ss_pred             cCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhhhhhhh
Q psy12639         81 LRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQVKQEY  119 (134)
Q Consensus        81 ~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  119 (134)
                      .+...|..|++.|++++++.|.  +..|.....|..|....
T Consensus       116 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A          116 SQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH  156 (190)
T ss_dssp             SSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            8888888888888888888887  67788888888777554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=4.4e-25  Score=128.51  Aligned_cols=108  Identities=26%  Similarity=0.546  Sum_probs=101.9

Q ss_pred             cCCCceeCcc--chhhccChHHHHHHHhccccCCCceecC--CCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHH
Q psy12639          9 TGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSY   84 (134)
Q Consensus         9 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~   84 (134)
                      .++++|.|.+  |++.|.....|..|++. |.+.++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.+..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHh-hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            5788999997  99999999999999997 9999999999  79999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCC--C--CCCcccchhhhhhhh
Q psy12639         85 ELVLHLKKCHREDARNP--Y--APAFVDVNTVAQVKQ  117 (134)
Q Consensus        85 ~l~~H~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~  117 (134)
                      .|..|++.|++++++.|  +  +..|.....|..|.+
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            99999999999999999  4  889999999988864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.6e-25  Score=128.27  Aligned_cols=113  Identities=22%  Similarity=0.428  Sum_probs=103.8

Q ss_pred             cCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhh---hcCCCCcccCccchhhcCHHH
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRV---HTGEKPYACNLCTVRYLRSYE   85 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~---h~~~~~~~C~~C~~~f~~~~~   85 (134)
                      .++++|.|+.|++.|.....|..|++. |.+.++|.|..|++.|.....|..|+..   +.++++|.|+.|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHH-HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHh-CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            467899999999999999999999987 9999999999999999999999999985   578899999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCC--CCCcccchhhhhhhhhhhcC
Q psy12639         86 LVLHLKKCHREDARNPY--APAFVDVNTVAQVKQEYEEL  122 (134)
Q Consensus        86 l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  122 (134)
                      |..|++.|+++++|.|.  +..|.....|..|....+..
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            99999999999999999  88999999999998765443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=4.5e-24  Score=119.90  Aligned_cols=92  Identities=29%  Similarity=0.590  Sum_probs=86.9

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHH
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELV   87 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~   87 (134)
                      +.+++||.|..|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGG-CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHh-cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            4678999999999999999999999997 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC
Q psy12639         88 LHLKKCHREDARN  100 (134)
Q Consensus        88 ~H~~~~~~~~~~~  100 (134)
                      .|++.|+++.+..
T Consensus        82 ~H~~~h~~~~~p~   94 (96)
T 2dmd_A           82 VHLRSHTGDSGPS   94 (96)
T ss_dssp             HHHTTCCSCCCCC
T ss_pred             HHHHHhcCCCCCC
Confidence            9999999886543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.91  E-value=3.8e-24  Score=133.89  Aligned_cols=118  Identities=22%  Similarity=0.416  Sum_probs=101.3

Q ss_pred             ChhHhhhccCCCceeC--ccchhhccChHHHHHHHhccccCCCceecC--CCCCccCChhhHHhHH-hhh-cCCCCccc-
Q psy12639          1 MESHLMLHTGAKPYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECC--HCARSFPCKSYLIPHL-RVH-TGEKPYAC-   73 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C--~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~-~~h-~~~~~~~C-   73 (134)
                      |..|+++|.++++|.|  ..|++.|.+...|..|++. |.++++|.|.  .|++.|.....|..|+ +.| .+.++|.| 
T Consensus        30 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  108 (190)
T 1tf6_A           30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCH  108 (190)
T ss_dssp             HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTT-TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEEC
T ss_pred             HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHH-ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCC
Confidence            4678888889999999  7799999999999999986 8888899998  8999999999999998 556 46778999 


Q ss_pred             -CccchhhcCHHHHHHHHHhhcCCCCCCC----CCCCcccchhhhhhhhhh
Q psy12639         74 -NLCTVRYLRSYELVLHLKKCHREDARNP----YAPAFVDVNTVAQVKQEY  119 (134)
Q Consensus        74 -~~C~~~f~~~~~l~~H~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  119 (134)
                       +.|++.|.+...|..|+++|+++++|.|    .+..|.....|..|....
T Consensus       109 ~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A          109 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             SSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS
T ss_pred             CCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh
Confidence             8899999999999999999999999988    367888888888887653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.90  E-value=1.1e-23  Score=120.40  Aligned_cols=93  Identities=25%  Similarity=0.509  Sum_probs=87.8

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHH
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELV   87 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~   87 (134)
                      ..++++|.|..|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERT-HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHH-HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHH-cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            3467889999999999999999999997 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCC
Q psy12639         88 LHLKKCHREDARNP  101 (134)
Q Consensus        88 ~H~~~~~~~~~~~~  101 (134)
                      .|+++|++++++.+
T Consensus        91 ~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           91 VHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHTTSCCCCCC
T ss_pred             HHHHHhCCCCCCcC
Confidence            99999999988754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=4e-24  Score=125.35  Aligned_cols=108  Identities=25%  Similarity=0.487  Sum_probs=98.0

Q ss_pred             CCCceeCc--cchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCc--cchhhcCHHH
Q psy12639         10 GAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNL--CTVRYLRSYE   85 (134)
Q Consensus        10 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~   85 (134)
                      .+++|.|+  .|++.|.+...|..|++. | +.++|.|..|++.|.....|..|++.|.++++|.|+.  |++.|.+...
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHT-H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGG-G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHH-c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHH
Confidence            35789999  799999999999999986 7 8889999999999999999999999999999999986  9999999999


Q ss_pred             HHHHHHhhcCCCCCCC----CCCCcccchhhhhhhhhh
Q psy12639         86 LVLHLKKCHREDARNP----YAPAFVDVNTVAQVKQEY  119 (134)
Q Consensus        86 l~~H~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  119 (134)
                      |..|++.|+++++|.|    .+..|.....|..|....
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            9999999999999999    378999999999998654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=3e-24  Score=130.36  Aligned_cols=111  Identities=27%  Similarity=0.452  Sum_probs=91.7

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCCc--------eecCCCCCccCChhhHHhHHhhhcCCCCcccCc--cc
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM--------YECCHCARSFPCKSYLIPHLRVHTGEKPYACNL--CT   77 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~--------~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~   77 (134)
                      .....+|.|..|++.|.+...|..|++..|.+..+        |.|..|++.|.....|..|++.|.++++|.|+.  |+
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            34567788889999999888888888865666554        788888888888888888988888888888887  99


Q ss_pred             hhhcCHHHHHHHHHhhcCCCCCCCC----CCCcccchhhhhhhhh
Q psy12639         78 VRYLRSYELVLHLKKCHREDARNPY----APAFVDVNTVAQVKQE  118 (134)
Q Consensus        78 ~~f~~~~~l~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  118 (134)
                      +.|.+...|..|++.|+++++|.|.    +..|.....|..|.+.
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence            9999888899998888888888884    5688888888888754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=1.3e-23  Score=123.04  Aligned_cols=95  Identities=29%  Similarity=0.643  Sum_probs=88.1

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhcc--ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccch
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLA--HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTV   78 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~--h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   78 (134)
                      |..|+++|.++++|.|+.|++.|.+...|..|+...  +.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  102 (124)
T 2dlq_A           23 LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ  102 (124)
T ss_dssp             HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred             HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccc
Confidence            568999999999999999999999999999999852  567889999999999999999999999999999999999999


Q ss_pred             hhcCHHHHHHHHHhhcC
Q psy12639         79 RYLRSYELVLHLKKCHR   95 (134)
Q Consensus        79 ~f~~~~~l~~H~~~~~~   95 (134)
                      .|.+...|..|++..|.
T Consensus       103 ~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A          103 QFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             EESSHHHHHHHHHHTSS
T ss_pred             hhCCHHHHHHHHHHHCC
Confidence            99999999999986443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=2.9e-23  Score=121.65  Aligned_cols=97  Identities=32%  Similarity=0.673  Sum_probs=87.3

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhhcCCCCcccC--cc
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEKPYACN--LC   76 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C   76 (134)
                      |..|+++| ++++|.|..|++.|.+...|..|++. |.+.++|.|..  |++.|.....|..|++.|.++++|.|+  .|
T Consensus        23 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  100 (124)
T 1ubd_C           23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGC  100 (124)
T ss_dssp             HHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGG-TSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTC
T ss_pred             HHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCC
Confidence            56899888 88999999999999999999999987 99999999986  999999999999999999999999996  59


Q ss_pred             chhhcCHHHHHHHHHhhcCCCCC
Q psy12639         77 TVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        77 ~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      ++.|.+...|..|+++|++++++
T Consensus       101 ~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          101 NKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCCCSSTTTTHHHHHHHC-----
T ss_pred             CCccCCHHHHHHHHHHHcccccC
Confidence            99999999999999999988654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.90  E-value=8.3e-24  Score=117.46  Aligned_cols=87  Identities=37%  Similarity=0.777  Sum_probs=80.5

Q ss_pred             CCCceeCc--cchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHH
Q psy12639         10 GAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELV   87 (134)
Q Consensus        10 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~   87 (134)
                      |++||.|+  .|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.+...|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHH-hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            47899998  599999999999999997 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCC
Q psy12639         88 LHLKKCHRED   97 (134)
Q Consensus        88 ~H~~~~~~~~   97 (134)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.90  E-value=2e-24  Score=125.13  Aligned_cols=99  Identities=18%  Similarity=0.318  Sum_probs=88.0

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhcc-ccCCCce-ecCCCCCcc--CChhhHHhHHhhhcCCCCcccCcc
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLA-HCTGEMY-ECCHCARSF--PCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~-h~~~~~~-~C~~C~~~~--~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+.|+++|.+++||.|..|++.|.....|..|++.. |.+.+++ .|..|++.|  .....|..|++.|.++++|.|+.|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            678999999999999999999999999999999841 4455554 599999998  889999999999999999999999


Q ss_pred             chhhcCHHHHHHHHHhhcCCCCC
Q psy12639         77 TVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        77 ~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      ++.|.....|..|++.++.....
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             CCccCCHHHHHHHHHHhCCcccC
Confidence            99999999999999998865443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=5.2e-24  Score=123.93  Aligned_cols=92  Identities=39%  Similarity=0.775  Sum_probs=87.7

Q ss_pred             ChhHhhhccCCCceeCc--cchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCccc--Ccc
Q psy12639          1 MESHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYAC--NLC   76 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C--~~C   76 (134)
                      |..|+++|.++++|.|+  .|++.|.+...|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|  +.|
T Consensus        24 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  102 (119)
T 2jp9_A           24 LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSC  102 (119)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTC
T ss_pred             HHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCC
Confidence            56899999999999999  799999999999999997 9999999999999999999999999999999999999  899


Q ss_pred             chhhcCHHHHHHHHHhh
Q psy12639         77 TVRYLRSYELVLHLKKC   93 (134)
Q Consensus        77 ~~~f~~~~~l~~H~~~~   93 (134)
                      ++.|.+...|..|+++|
T Consensus       103 ~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          103 QKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCEESSHHHHHHHHHTC
T ss_pred             ccccCCHHHHHHHHhcC
Confidence            99999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=5.4e-24  Score=121.94  Aligned_cols=98  Identities=17%  Similarity=0.241  Sum_probs=90.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLR   82 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~   82 (134)
                      .++++|.++++|.|..|++.|.....|..|++. |.  ++|.|..|++.|.....|..|++ |.++++|.|+.|++.|..
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERL-CR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH-HH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHH-CC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            456789999999999999999999999999997 73  58999999999999999999996 999999999999999999


Q ss_pred             HHHHHHHHH-hhcCCCCCCCCCC
Q psy12639         83 SYELVLHLK-KCHREDARNPYAP  104 (134)
Q Consensus        83 ~~~l~~H~~-~~~~~~~~~~~~~  104 (134)
                      ...|..|++ .|.+++++.+.++
T Consensus        82 ~~~L~~H~~~~H~~~~~~~~~~p  104 (107)
T 1wjp_A           82 SFSIWRHQVEVHNQNNMAPTSGP  104 (107)
T ss_dssp             HHHHHHHHHHTSCCCCCCCCCCS
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCC
Confidence            999999997 8888888887743

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=7.7e-24  Score=128.46  Aligned_cols=118  Identities=23%  Similarity=0.425  Sum_probs=104.0

Q ss_pred             ChhHhh---hccCCCceeCccc-----hhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhhcCCCC
Q psy12639          1 MESHLM---LHTGAKPYACTEC-----DQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEKP   70 (134)
Q Consensus         1 l~~h~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~   70 (134)
                      |..|++   +|.++++|.|++|     ++.|.....|..|++. |.+.++|.|.+  |++.|.....|..|++.|.++++
T Consensus        19 L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   97 (155)
T 2gli_A           19 LVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP   97 (155)
T ss_dssp             HHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH-HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCC
T ss_pred             HHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh-cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCC
Confidence            467876   6888899998753     4899999999999987 88999999985  99999999999999999999999


Q ss_pred             cccCc--cchhhcCHHHHHHHH-HhhcCCCCCCCC----CCCcccchhhhhhhhhh
Q psy12639         71 YACNL--CTVRYLRSYELVLHL-KKCHREDARNPY----APAFVDVNTVAQVKQEY  119 (134)
Q Consensus        71 ~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  119 (134)
                      |.|+.  |++.|.+...|..|+ +.|.+++++.|.    +..|.....|..|....
T Consensus        98 ~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           98 YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            99998  999999999999998 789999999984    67899999999887653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=4.3e-23  Score=129.09  Aligned_cols=115  Identities=26%  Similarity=0.415  Sum_probs=103.4

Q ss_pred             ChhHhhhccCCCceeCc--cchhhccChHHHHHHHhccc-cCCCceec--CCCCCccCChhhHHhHHhhhcCCCCcccCc
Q psy12639          1 MESHLMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAH-CTGEMYEC--CHCARSFPCKSYLIPHLRVHTGEKPYACNL   75 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~h-~~~~~~~C--~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   75 (134)
                      |.+|+++|.++++|.|.  .|++.|.+...|..|++..| .+.++|.|  ..|++.|.....|..|++.|.++++|.|+.
T Consensus        60 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A           60 LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             HHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             HHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCC
Confidence            56899999999999999  89999999999999995447 57789999  889999999999999999999999999988


Q ss_pred             --cchhhcCHHHHHHHHHhhcCCCCCCCC-----CCCcccchhhhhhhhh
Q psy12639         76 --CTVRYLRSYELVLHLKKCHREDARNPY-----APAFVDVNTVAQVKQE  118 (134)
Q Consensus        76 --C~~~f~~~~~l~~H~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  118 (134)
                        |++.|.+...|..|+++|++   +.|.     +..|.....|..|...
T Consensus       140 ~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~  186 (190)
T 1tf6_A          140 EGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE  186 (190)
T ss_dssp             SSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTT
T ss_pred             CCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHh
Confidence              99999999999999999987   4444     5688888889888754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.89  E-value=4.3e-23  Score=112.62  Aligned_cols=82  Identities=33%  Similarity=0.661  Sum_probs=78.6

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHh
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      ||.|..|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI-HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH-HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHH-cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            68999999999999999999997 99999999999999999999999999999999999999999999999999999999


Q ss_pred             hcC
Q psy12639         93 CHR   95 (134)
Q Consensus        93 ~~~   95 (134)
                      |++
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.88  E-value=8.6e-23  Score=117.36  Aligned_cols=88  Identities=32%  Similarity=0.740  Sum_probs=83.9

Q ss_pred             hhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHH
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYE   85 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~   85 (134)
                      ..|.++++|.| .|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHH-HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHH-cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHH
Confidence            35789999999 999999999999999997 9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy12639         86 LVLHLKKCHR   95 (134)
Q Consensus        86 l~~H~~~~~~   95 (134)
                      |..|++.|+.
T Consensus        81 l~~H~~~~~~   90 (110)
T 2csh_A           81 FHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHccc
Confidence            9999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=6.9e-23  Score=124.24  Aligned_cols=94  Identities=39%  Similarity=0.724  Sum_probs=89.0

Q ss_pred             ChhHhhhccCCCceeCcc--chhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHH-hhhcCCCCcccCc
Q psy12639          1 MESHLMLHTGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHL-RVHTGEKPYACNL   75 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~-~~h~~~~~~~C~~   75 (134)
                      |.+|+++|.+++||.|.+  |++.|.+...|..|++. |.+.++|.|..  |++.|.....|..|+ +.|.++++|.|+.
T Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHH-TTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHH-cCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            568999999999999986  99999999999999997 99999999998  999999999999999 7899999999988


Q ss_pred             --cchhhcCHHHHHHHHHhhcC
Q psy12639         76 --CTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        76 --C~~~f~~~~~l~~H~~~~~~   95 (134)
                        |++.|.+...|..|++.+++
T Consensus       134 ~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          134 PGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCccccCCHHHHHHHHHhhcC
Confidence              99999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=5.7e-22  Score=111.05  Aligned_cols=87  Identities=30%  Similarity=0.517  Sum_probs=81.2

Q ss_pred             cCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCC--CCcccCccchhhcCHHHH
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGE--KPYACNLCTVRYLRSYEL   86 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~--~~~~C~~C~~~f~~~~~l   86 (134)
                      .++++|.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|.++  ++|.|+.|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHH-SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHh-cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            578899999999999999999999997 99999999999999999999999999999887  899999999999999999


Q ss_pred             HHHHH-hhcCC
Q psy12639         87 VLHLK-KCHRE   96 (134)
Q Consensus        87 ~~H~~-~~~~~   96 (134)
                      ..|++ .|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99997 55543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=5.2e-22  Score=120.43  Aligned_cols=102  Identities=25%  Similarity=0.524  Sum_probs=94.5

Q ss_pred             ChhHhhh-ccCCCc--------eeCccchhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhhcCCC
Q psy12639          1 MESHLML-HTGAKP--------YACTECDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus         1 l~~h~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      |..|+++ |.+..+        |.|..|++.|.....|..|++. |.+.++|.|..  |++.|.....|..|++.|.+++
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~  119 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV-HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEK  119 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHH-HHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSC
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHh-cCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCC
Confidence            4678876 766655        7899999999999999999997 99999999998  9999999999999999999999


Q ss_pred             CcccCc--cchhhcCHHHHHHHHHhhcCCCCCCCCC
Q psy12639         70 PYACNL--CTVRYLRSYELVLHLKKCHREDARNPYA  103 (134)
Q Consensus        70 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~  103 (134)
                      +|.|+.  |++.|.....|..|+++|+++++|.|.+
T Consensus       120 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~g  155 (155)
T 2rpc_A          120 PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSSG  155 (155)
T ss_dssp             SBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSCC
T ss_pred             CccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            999997  9999999999999999999999998864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.84  E-value=1.1e-20  Score=106.63  Aligned_cols=85  Identities=32%  Similarity=0.656  Sum_probs=79.9

Q ss_pred             CCCceeCcc--chhhccChHHHHHHHhccccCCCceecC--CCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHH
Q psy12639         10 GAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYE   85 (134)
Q Consensus        10 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~   85 (134)
                      ..++|.|.+  |++.|.....|..|++. |.+.++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHH-HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHH-hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            457899997  99999999999999997 9999999996  699999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy12639         86 LVLHLKKCHR   95 (134)
Q Consensus        86 l~~H~~~~~~   95 (134)
                      |..|+++|.+
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999999863

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=1.9e-21  Score=115.23  Aligned_cols=82  Identities=22%  Similarity=0.476  Sum_probs=75.4

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCC------CcccC
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK------PYACN   74 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~------~~~C~   74 (134)
                      |++|+++|.+++||.|+.|++.|.+...|..|+++ |++++||.|..|++.|.....|..|++.|++++      +|.|.
T Consensus        38 L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~  116 (133)
T 2lt7_A           38 LRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-HTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLH  116 (133)
T ss_dssp             HHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-HHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEEC
T ss_pred             HHHHHHHcCCCCCeeCCccCeecccccchhhhccc-cCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecC
Confidence            57899999999999999999999999999999987 999999999999999999999999999987654      58899


Q ss_pred             ccchhhcCH
Q psy12639         75 LCTVRYLRS   83 (134)
Q Consensus        75 ~C~~~f~~~   83 (134)
                      .|++.|...
T Consensus       117 ~C~k~~~~~  125 (133)
T 2lt7_A          117 PCRSLQIRQ  125 (133)
T ss_dssp             CCCSSCCCC
T ss_pred             CCCchhhhc
Confidence            999988643

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.84  E-value=8.4e-21  Score=104.98  Aligned_cols=82  Identities=32%  Similarity=0.672  Sum_probs=78.2

Q ss_pred             CCceeCcc--chhhccChHHHHHHHhccccCCCceecC--CCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHH
Q psy12639         11 AKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYEL   86 (134)
Q Consensus        11 ~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l   86 (134)
                      .++|.|.+  |++.|.....|..|++. |.+.++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTT-SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHh-cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            56899999  99999999999999997 9999999997  5999999999999999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy12639         87 VLHLKKC   93 (134)
Q Consensus        87 ~~H~~~~   93 (134)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.83  E-value=7.6e-21  Score=97.55  Aligned_cols=57  Identities=26%  Similarity=0.470  Sum_probs=37.8

Q ss_pred             CCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         40 GEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        40 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ++||.|..|++.|.....|..|+++|++++||.|+.|++.|...+.|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.82  E-value=1.4e-21  Score=108.13  Aligned_cols=83  Identities=20%  Similarity=0.401  Sum_probs=78.1

Q ss_pred             CCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHH
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHL   90 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   90 (134)
                      ++||.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|.+ .+|.|+.|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH-HHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHH-cCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            5799999999999999999999997 9999999999999999999999999999874 7899999999999999999999


Q ss_pred             HhhcC
Q psy12639         91 KKCHR   95 (134)
Q Consensus        91 ~~~~~   95 (134)
                      +..++
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=2.6e-20  Score=95.53  Aligned_cols=59  Identities=25%  Similarity=0.510  Sum_probs=55.8

Q ss_pred             CCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCC
Q psy12639         10 GAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      .|+||.|.+|+++|.....|..|+++ |++++||.|..|++.|...+.|..|+++|.|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~-Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRA-HLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHH-HHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHH-hCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37999999999999999999999997 999999999999999999999999999998864

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.5e-20  Score=101.40  Aligned_cols=80  Identities=25%  Similarity=0.502  Sum_probs=66.7

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCC---CceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTG---EMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~---~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      |.+|+++|.+++||.|..|++.|.....|..|++..|...   ++|.|..|++.|.....|..|++.|.+++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            5678888999999999999999999999999987634332   6788988999898888899998888888888888888


Q ss_pred             hhh
Q psy12639         78 VRY   80 (134)
Q Consensus        78 ~~f   80 (134)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.79  E-value=1.8e-19  Score=98.64  Aligned_cols=78  Identities=33%  Similarity=0.696  Sum_probs=74.1

Q ss_pred             ceeC--ccchhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhhcCCCCcccCc---cchhhcCHHH
Q psy12639         13 PYAC--TECDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEKPYACNL---CTVRYLRSYE   85 (134)
Q Consensus        13 ~~~C--~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~---C~~~f~~~~~   85 (134)
                      ||.|  +.|++.|.....|..|++. |.++++|.|..  |++.|.....|..|++.|.+   |.|+.   |++.|.....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH-hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            6899  8899999999999999987 99999999988  99999999999999999987   99999   9999999999


Q ss_pred             HHHHHHhhc
Q psy12639         86 LVLHLKKCH   94 (134)
Q Consensus        86 l~~H~~~~~   94 (134)
                      |..|++.||
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.2e-19  Score=97.15  Aligned_cols=73  Identities=23%  Similarity=0.536  Sum_probs=67.0

Q ss_pred             cCCCceeCcc--chhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhhcCCCCcccCccchhhc
Q psy12639          9 TGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYL   81 (134)
Q Consensus         9 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   81 (134)
                      .++++|.|..  |++.|.....|..|++..|.+.++|.|..  |++.|.....|..|++.|.++++|.|+.|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            5678999987  99999999999999983499999999998  9999999999999999999999999999999884

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=4.2e-18  Score=91.71  Aligned_cols=65  Identities=31%  Similarity=0.592  Sum_probs=45.0

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      +.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44556677777777777777777777777666777777777777777777777777777666655

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=9.9e-18  Score=93.58  Aligned_cols=85  Identities=20%  Similarity=0.344  Sum_probs=78.3

Q ss_pred             cCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC--CCCCCC--CCCcccchhhh
Q psy12639         38 CTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE--DARNPY--APAFVDVNTVA  113 (134)
Q Consensus        38 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~~~~--~~~~~~~~~~~  113 (134)
                      .+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|+++  ++|.|.  +..|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999987  899999  78999999999


Q ss_pred             hhhhhhhcC
Q psy12639        114 QVKQEYEEL  122 (134)
Q Consensus       114 ~~~~~~~~~  122 (134)
                      .|....+..
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            998755443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=1.1e-18  Score=98.30  Aligned_cols=80  Identities=13%  Similarity=0.115  Sum_probs=68.2

Q ss_pred             hccChHHHHHHHhccccCCCceecCCCCCccC-ChhhHHhHHhhhcC-CCCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         22 KFNRNSKLKIHYNLAHCTGEMYECCHCARSFP-CKSYLIPHLRVHTG-EKPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        22 ~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~-~~~~l~~h~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      ++.....+..|++. |.+.++|.|..|++.|. ....|..|++.|.+ +++|.|+.|++.|.....|..|+++|+++++.
T Consensus         5 s~~~~~~~~~h~~~-h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRA-IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHT-TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHH-hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            34445566778886 88999999999999999 99999999999888 88999999999999999999999999988775


Q ss_pred             CCC
Q psy12639        100 NPY  102 (134)
Q Consensus       100 ~~~  102 (134)
                      ...
T Consensus        84 ~~~   86 (98)
T 2gqj_A           84 DAE   86 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.9e-18  Score=92.38  Aligned_cols=67  Identities=34%  Similarity=0.647  Sum_probs=63.1

Q ss_pred             hhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCccc
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYAC   73 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   73 (134)
                      ..+.++++|.|..|++.|.....|..|++. |.++++|.|.+|++.|.....|..|++.|.+++||.|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHH-cCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            346678999999999999999999999987 9999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=2.4e-18  Score=97.23  Aligned_cols=69  Identities=20%  Similarity=0.379  Sum_probs=46.1

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccc---cCCCceecCCCCCccCChhhHHhH-HhhhcCCCCcccCcc
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAH---CTGEMYECCHCARSFPCKSYLIPH-LRVHTGEKPYACNLC   76 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h---~~~~~~~C~~C~~~~~~~~~l~~h-~~~h~~~~~~~C~~C   76 (134)
                      -.|++||.|..|++.|.....|..|++..|   .+++||.|..|++.|.....|..| ++.|.+++||.|..+
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            346677777777777777777777765336   445667777777777777777777 566777777766653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=1e-17  Score=89.50  Aligned_cols=63  Identities=37%  Similarity=0.673  Sum_probs=51.3

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      +.+.++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            556778888888888888888888888888888888888888888888888888888877664

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.1e-18  Score=92.76  Aligned_cols=75  Identities=20%  Similarity=0.401  Sum_probs=68.2

Q ss_pred             HHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCC----CCcccCccchhhcCHHHHHHHHHhhcCCCCCCCCC
Q psy12639         28 KLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGE----KPYACNLCTVRYLRSYELVLHLKKCHREDARNPYA  103 (134)
Q Consensus        28 ~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  103 (134)
                      ++..|+++ |.++++|.|..|++.|.....|..|++.+...    ++|.|+.|++.|.....|..|+++|+++.++.|..
T Consensus         2 s~~~H~~~-H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            2 SSGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTTCCSTT-CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             Ccccccce-ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            35678886 99999999999999999999999999887655    78999999999999999999999999999998873

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.2e-17  Score=93.49  Aligned_cols=83  Identities=25%  Similarity=0.347  Sum_probs=77.8

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhh
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQ  114 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~  114 (134)
                      +.+.++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|++++++.|.  +..|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            457789999999999999999999999999999999999999999999999999999999999999  789999999999


Q ss_pred             hhhhh
Q psy12639        115 VKQEY  119 (134)
Q Consensus       115 ~~~~~  119 (134)
                      |....
T Consensus        83 H~~~h   87 (96)
T 2dmd_A           83 HLRSH   87 (96)
T ss_dssp             HHTTC
T ss_pred             HHHHh
Confidence            98654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.9e-17  Score=87.54  Aligned_cols=63  Identities=29%  Similarity=0.568  Sum_probs=46.9

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      |.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|+++++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            566677777777777777777777777777777777777777777777777777777776554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1e-17  Score=96.04  Aligned_cols=83  Identities=24%  Similarity=0.447  Sum_probs=78.1

Q ss_pred             cccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhh
Q psy12639         36 AHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVA  113 (134)
Q Consensus        36 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~  113 (134)
                      .|+++++|.| .|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|+++++|.|.  +..|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3889999999 89999999999999999999999999999999999999999999999999999999  78999999999


Q ss_pred             hhhhhh
Q psy12639        114 QVKQEY  119 (134)
Q Consensus       114 ~~~~~~  119 (134)
                      .|....
T Consensus        83 ~H~~~~   88 (110)
T 2csh_A           83 RHVTSC   88 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            998543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=2.4e-17  Score=92.42  Aligned_cols=74  Identities=12%  Similarity=0.148  Sum_probs=66.5

Q ss_pred             hhccChHHHHHHHhccccCCCceecCCCCCcc-CChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHH-HHhhcCC
Q psy12639         21 QKFNRNSKLKIHYNLAHCTGEMYECCHCARSF-PCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH-LKKCHRE   96 (134)
Q Consensus        21 ~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~-~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~   96 (134)
                      ..|.....+..|++. +.+.++|.|..|++.| .....|..|++.| ++++|.|..|++.|.....|..| +++|.++
T Consensus        14 ~~~~~~~~~~~~~~~-~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLE-IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHH-HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHH-hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            356677788888886 8889999999999999 9999999999999 99999999999999999999999 7777654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.71  E-value=5.5e-17  Score=92.30  Aligned_cols=84  Identities=27%  Similarity=0.410  Sum_probs=77.9

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhh
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQ  114 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~  114 (134)
                      ....++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|+++++|.|.  +..|.....|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            345678999999999999999999999999999999999999999999999999999999999999  789999999999


Q ss_pred             hhhhhh
Q psy12639        115 VKQEYE  120 (134)
Q Consensus       115 ~~~~~~  120 (134)
                      |.....
T Consensus        92 H~~~H~   97 (106)
T 2ee8_A           92 HKTLHM   97 (106)
T ss_dssp             HHHHTT
T ss_pred             HHHHhC
Confidence            986543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.1e-17  Score=90.02  Aligned_cols=63  Identities=33%  Similarity=0.602  Sum_probs=29.7

Q ss_pred             hhHhhhccCCCceeCccchhhccChHHHHHHHhccccCC-CceecCCCCCccCChhhHHhHHhh
Q psy12639          2 ESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTG-EMYECCHCARSFPCKSYLIPHLRV   64 (134)
Q Consensus         2 ~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~-~~~~C~~C~~~~~~~~~l~~h~~~   64 (134)
                      .+|+++|.+++||.|..|++.|.....|..|++..|.+. ++|.|..|++.|.....|..|++.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            344555555555555555555555555555544224332 344444444444444444444443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=4.2e-18  Score=95.87  Aligned_cols=73  Identities=21%  Similarity=0.291  Sum_probs=67.2

Q ss_pred             ChhHhhhccCCCceeCccchhhcc-ChHHHHHHHhccccC-CCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFN-RNSKLKIHYNLAHCT-GEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~-~~~~l~~h~~~~h~~-~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      +.+|+++|.++++|.|..|++.|. ....|..|++. |.+ +++|.|.+|++.|.....|..|++.|++++|....
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            457899999999999999999999 99999999997 887 89999999999999999999999999999886543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=1.9e-17  Score=89.94  Aligned_cols=77  Identities=23%  Similarity=0.489  Sum_probs=73.2

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhhhhhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQVKQE  118 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  118 (134)
                      ||.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|++++++.|.  +..|.....|..|.+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            5899999999999999999999999999999999999999999999999999999999999  7899999999988764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.71  E-value=2.2e-17  Score=88.21  Aligned_cols=64  Identities=34%  Similarity=0.748  Sum_probs=60.6

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCc
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPY   71 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   71 (134)
                      .+.++++|.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|.+++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTV-HTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHH-HCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHH-cCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            46788999999999999999999999997 99999999999999999999999999999999886

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=5.2e-19  Score=102.20  Aligned_cols=95  Identities=14%  Similarity=0.150  Sum_probs=84.8

Q ss_pred             hHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhh--hcCCCCcc-cCccchhh--cCHHHHHHHHHhhcCCCCCC
Q psy12639         26 NSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRV--HTGEKPYA-CNLCTVRY--LRSYELVLHLKKCHREDARN  100 (134)
Q Consensus        26 ~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~~~~~~~~  100 (134)
                      ...|..|++. |.++++|.|..|++.|.....|..|++.  |.+.+++. |+.|++.|  .....|..|+++|+++++|.
T Consensus         4 ~~~l~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGSI-FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCC-CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             chhhhhheee-eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            4567889986 9999999999999999999999999998  77777654 99999999  89999999999999999999


Q ss_pred             CC--CCCcccchhhhhhhhhhhc
Q psy12639        101 PY--APAFVDVNTVAQVKQEYEE  121 (134)
Q Consensus       101 ~~--~~~~~~~~~~~~~~~~~~~  121 (134)
                      |.  +..|.....|..|......
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCC
Confidence            99  8899999999999876543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=2.8e-17  Score=90.83  Aligned_cols=81  Identities=26%  Similarity=0.504  Sum_probs=74.5

Q ss_pred             CCCceecC--CCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhh
Q psy12639         39 TGEMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQ  114 (134)
Q Consensus        39 ~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~  114 (134)
                      ++++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|++.|++++++.|.  +..|.....|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35789998  59999999999999999999999999999999999999999999999999999999  889999999999


Q ss_pred             hhhhh
Q psy12639        115 VKQEY  119 (134)
Q Consensus       115 ~~~~~  119 (134)
                      |....
T Consensus        81 H~~~H   85 (90)
T 1a1h_A           81 HTKIH   85 (90)
T ss_dssp             HHGGG
T ss_pred             HHHHh
Confidence            98654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.9e-17  Score=86.41  Aligned_cols=60  Identities=35%  Similarity=0.688  Sum_probs=43.6

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+++
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            666677777777777777777777777777777777777777777777777777777654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5e-17  Score=86.40  Aligned_cols=65  Identities=38%  Similarity=0.753  Sum_probs=60.7

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      +.++|.+++||.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|.++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHh-cCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45689999999999999999999999999997 999999999999999999999999999998764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.7e-17  Score=91.63  Aligned_cols=69  Identities=19%  Similarity=0.311  Sum_probs=62.0

Q ss_pred             hhHhhhccCCCceeCccchhhc-cChHHHHHHHhccccCCCceecCCCCCccCChhhHHhH-HhhhcCCCCcc
Q psy12639          2 ESHLMLHTGAKPYACTECDQKF-NRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPH-LRVHTGEKPYA   72 (134)
Q Consensus         2 ~~h~~~h~~~~~~~C~~C~~~f-~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h-~~~h~~~~~~~   72 (134)
                      ..|++++.++++|.|+.|++.| .....|..|++. | ++++|.|..|++.|.....|..| ++.|.+...|.
T Consensus        23 ~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~-h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMEN-C-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             HHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHH-H-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             HHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHH-H-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            4677788899999999999999 999999999997 8 99999999999999999999999 88897655443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.68  E-value=5.7e-17  Score=82.24  Aligned_cols=56  Identities=39%  Similarity=0.769  Sum_probs=42.1

Q ss_pred             CCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         40 GEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        40 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      +++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            45778888888888888888888888888888888888888888888888877763

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=9.2e-17  Score=84.87  Aligned_cols=64  Identities=25%  Similarity=0.530  Sum_probs=60.3

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCc
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPY   71 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   71 (134)
                      .|.++++|.|..|++.|.....|..|++. |.+.++|.|.+|++.|.....|..|++.|.+++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERI-HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            46789999999999999999999999987 99999999999999999999999999999988874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=8.1e-18  Score=99.02  Aligned_cols=82  Identities=18%  Similarity=0.237  Sum_probs=69.2

Q ss_pred             CCceeCccchhhcc------ChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHH
Q psy12639         11 AKPYACTECDQKFN------RNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSY   84 (134)
Q Consensus        11 ~~~~~C~~C~~~f~------~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~   84 (134)
                      ++.+.|.+|...|.      ....|..|+ . |.+++||.|..|++.|.....|..|++.|  ++||.|+.|++.|....
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~-h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-A-SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-H-HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-H-hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH
Confidence            34567777777766      556666676 3 88889999999999999999999999998  88999999999999999


Q ss_pred             HHHHHHHhhcCC
Q psy12639         85 ELVLHLKKCHRE   96 (134)
Q Consensus        85 ~l~~H~~~~~~~   96 (134)
                      .|..|++.|++.
T Consensus       115 ~l~~H~~~h~~~  126 (129)
T 2wbt_A          115 SALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCc
Confidence            999999998875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.7e-17  Score=87.99  Aligned_cols=68  Identities=25%  Similarity=0.407  Sum_probs=60.8

Q ss_pred             HHHHHhccccCCCceecCCCCCccCChhhHHhHHh-hhcCC-CCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         29 LKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR-VHTGE-KPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        29 l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +..|+++ |+++++|.|..|++.|.....|..|++ .|.++ ++|.|+.|++.|.....|..|++.+|...
T Consensus         3 ~~~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRT-HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCC-CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccc-cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            4568886 999999999999999999999999997 57764 89999999999999999999999877643

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=6.2e-17  Score=84.52  Aligned_cols=59  Identities=25%  Similarity=0.523  Sum_probs=41.9

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhh-h-cCCCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRV-H-TGEKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      |.++++|.|..|++.|.....|..|++. | .++++|.|+.|++.|.+...|..|++.+|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            6666777777777777777777777766 5 466777777777777777777777776664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=3.6e-17  Score=92.38  Aligned_cols=67  Identities=24%  Similarity=0.268  Sum_probs=61.8

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHh-hh---cCCCCcccCccchhhcCHHHHHHH-HHhhcCCCCCCCCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLR-VH---TGEKPYACNLCTVRYLRSYELVLH-LKKCHREDARNPYA  103 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~  103 (134)
                      -++++||.|..|++.|.....|..|++ .|   .+++||.|..|++.|...+.|..| +++|.++++|.|..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            357899999999999999999999998 48   568999999999999999999999 89999999999983

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=3.2e-16  Score=84.56  Aligned_cols=66  Identities=21%  Similarity=0.332  Sum_probs=62.1

Q ss_pred             ccCCCceecCC--CCCccCChhhHHhHHh-hhcCCCCcccCc--cchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         37 HCTGEMYECCH--CARSFPCKSYLIPHLR-VHTGEKPYACNL--CTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        37 h~~~~~~~C~~--C~~~~~~~~~l~~h~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      .++.++|.|..  |++.|.....|..|++ .|.++++|.|+.  |++.|.....|..|+++|+++++|.|.
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            35678899987  9999999999999999 799999999999  999999999999999999999999998

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=1.1e-16  Score=87.49  Aligned_cols=60  Identities=25%  Similarity=0.451  Sum_probs=50.6

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHH-hhcCC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLK-KCHRE   96 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~   96 (134)
                      +...++|.|++|++.|.....|..|++.|++++||.|+.|++.|.....|..|++ .|.+|
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            5566778999999999999999999999999999999999999999999999975 45544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=5.1e-18  Score=93.63  Aligned_cols=83  Identities=27%  Similarity=0.430  Sum_probs=74.8

Q ss_pred             CCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhhhhhh
Q psy12639         40 GEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVAQVKQ  117 (134)
Q Consensus        40 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  117 (134)
                      ++||.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.+++ .++.|.  +..|.....|..|..
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46899999999999999999999999999999999999999999999999999985 567777  778999999999988


Q ss_pred             hhhcCC
Q psy12639        118 EYEELP  123 (134)
Q Consensus       118 ~~~~~~  123 (134)
                      ..+.+.
T Consensus        80 ~~h~~~   85 (88)
T 1llm_C           80 RLKKLV   85 (88)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            766544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.3e-16  Score=83.29  Aligned_cols=63  Identities=22%  Similarity=0.529  Sum_probs=57.4

Q ss_pred             hhhccCCCceeCccchhhccChHHHHHHHhccc-cCCCceecCCCCCccCChhhHHhHHhhhcC
Q psy12639          5 LMLHTGAKPYACTECDQKFNRNSKLKIHYNLAH-CTGEMYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus         5 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h-~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      +++|.+++||.|+.|++.|.....|..|++..| .++++|.|+.|++.|.....|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            357889999999999999999999999998656 688999999999999999999999998764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.64  E-value=3.1e-16  Score=79.50  Aligned_cols=55  Identities=29%  Similarity=0.570  Sum_probs=40.5

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ||.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            4667777777777777777777777777777777777777777777777776655

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=3e-16  Score=85.81  Aligned_cols=63  Identities=22%  Similarity=0.447  Sum_probs=56.7

Q ss_pred             hhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHh-hhcCCC
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLR-VHTGEK   69 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~   69 (134)
                      .++.+.++|.|++|++.|.....|..|+++ |++++||.|..|++.|.....|..|++ .|.+++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRL-LHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHT-TSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhh-ccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            456677889999999999999999999997 999999999999999999999999975 577654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1e-16  Score=91.37  Aligned_cols=85  Identities=14%  Similarity=0.163  Sum_probs=76.8

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDV  109 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~  109 (134)
                      +++. |.++++|.|..|++.|.....|..|++.|.  ++|.|+.|++.|.....|..|+. |+++++|.|.  +..|...
T Consensus         7 ~~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASP-VENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCC-CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcc-cCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            3444 889999999999999999999999999984  78999999999999999999996 9999999999  7899999


Q ss_pred             hhhhhhhhhhh
Q psy12639        110 NTVAQVKQEYE  120 (134)
Q Consensus       110 ~~~~~~~~~~~  120 (134)
                      ..|..|.+..+
T Consensus        83 ~~L~~H~~~~H   93 (107)
T 1wjp_A           83 FSIWRHQVEVH   93 (107)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHHc
Confidence            99999987444

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=1e-18  Score=93.06  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=48.6

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |..|+++|.+++||.|..|++.|.....|..        +++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4567777777777777777777777665543        4567777777777777777777777777777777665

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2e-16  Score=84.20  Aligned_cols=68  Identities=29%  Similarity=0.598  Sum_probs=54.1

Q ss_pred             HHHHHHHhccccCCCceecC--CCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         27 SKLKIHYNLAHCTGEMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        27 ~~l~~h~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      ..+..|++..+.+.++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34556666667888889997  499999988899999888888888999999999999999999988763

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.62  E-value=3.9e-16  Score=79.12  Aligned_cols=56  Identities=30%  Similarity=0.529  Sum_probs=50.2

Q ss_pred             CCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhc
Q psy12639         10 GAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHT   66 (134)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   66 (134)
                      |++||.|+.|++.|.....|..|++. |.++++|.|..|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRT-HTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHH-HHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHH-cCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999997 999999999999999999999999999875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=9.8e-16  Score=84.36  Aligned_cols=79  Identities=32%  Similarity=0.502  Sum_probs=73.2

Q ss_pred             CCceecCC--CCCccCChhhHHhHHhhhcCCCCcccC--ccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhhh
Q psy12639         40 GEMYECCH--CARSFPCKSYLIPHLRVHTGEKPYACN--LCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTVA  113 (134)
Q Consensus        40 ~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~~  113 (134)
                      ..+|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|++++++.|.  +..|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45799999  999999999999999999999999997  5999999999999999999999999999  78999999999


Q ss_pred             hhhhh
Q psy12639        114 QVKQE  118 (134)
Q Consensus       114 ~~~~~  118 (134)
                      .|...
T Consensus        83 ~H~~~   87 (89)
T 2wbs_A           83 LHMKR   87 (89)
T ss_dssp             HHGGG
T ss_pred             HHHHh
Confidence            88753

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.1e-15  Score=82.30  Aligned_cols=59  Identities=22%  Similarity=0.385  Sum_probs=43.6

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcC---CCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTG---EKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      |+++++|.|..|++.|.....|..|++.|.+   +++|.|+.|++.|.....|..|++.+|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            6677777777777777777777777777764   6778888888888888888888754443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=4e-15  Score=83.58  Aligned_cols=81  Identities=31%  Similarity=0.469  Sum_probs=74.6

Q ss_pred             CCCceecCC--CCCccCChhhHHhHHhhhcCCCCcccC--ccchhhcCHHHHHHHHHhhcCCCCCCCC--CCCcccchhh
Q psy12639         39 TGEMYECCH--CARSFPCKSYLIPHLRVHTGEKPYACN--LCTVRYLRSYELVLHLKKCHREDARNPY--APAFVDVNTV  112 (134)
Q Consensus        39 ~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~--~~~~~~~~~~  112 (134)
                      ..++|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|+++++|.|.  +..|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            456899997  999999999999999999999999996  6999999999999999999999999999  7899999999


Q ss_pred             hhhhhhh
Q psy12639        113 AQVKQEY  119 (134)
Q Consensus       113 ~~~~~~~  119 (134)
                      ..|....
T Consensus        92 ~~H~~~H   98 (100)
T 2ebt_A           92 ALHMKRH   98 (100)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9987643

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=2e-15  Score=76.44  Aligned_cols=56  Identities=32%  Similarity=0.589  Sum_probs=53.1

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCC
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      ||.|..|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH-TSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHh-cCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999997 999999999999999999999999999998765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=2.1e-15  Score=81.15  Aligned_cols=66  Identities=17%  Similarity=0.303  Sum_probs=58.4

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccC---CCceecCCCCCccCChhhHHhHHh-hhcCCCCccc
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT---GEMYECCHCARSFPCKSYLIPHLR-VHTGEKPYAC   73 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~---~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C   73 (134)
                      .|.+++||.|..|++.|.....|..|++. |.+   +++|.|..|++.|.....|..|++ .|.+.++...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHH-HHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHH-hhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            47899999999999999999999999987 775   789999999999999999999995 5776666543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.8e-15  Score=76.67  Aligned_cols=53  Identities=38%  Similarity=0.693  Sum_probs=34.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHH-Hhhc
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHL-KKCH   94 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~~~   94 (134)
                      ||.|..|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|+ +.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            5666666666666666666666666666666666666666666666665 3443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=1.8e-14  Score=80.17  Aligned_cols=61  Identities=21%  Similarity=0.341  Sum_probs=49.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhh-hcCCCC--------cccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRV-HTGEKP--------YACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      .+.|..|++.|.....|..|++. |.++++        |.|+.|++.|.....|..|+++|+++++|.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35688888888888888888877 777766        88888888888888888888888888888875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.1e-14  Score=74.39  Aligned_cols=56  Identities=34%  Similarity=0.814  Sum_probs=51.7

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHH-hhhcCC
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHL-RVHTGE   68 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~-~~h~~~   68 (134)
                      +||.|..|++.|.....|..|++. |.++++|.|..|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHH-hCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999997 99999999999999999999999997 567654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=1e-14  Score=81.22  Aligned_cols=62  Identities=34%  Similarity=0.542  Sum_probs=57.2

Q ss_pred             ceeCccchhhccChHHHHHHHhccccCCCc--------eecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCTGEM--------YECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~--------~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      .+.|..|++.|.....|..|++..|.+.++        |.|..|++.|.....|..|++.|.+++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            367999999999999999999865888777        89999999999999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.2e-14  Score=77.21  Aligned_cols=60  Identities=33%  Similarity=0.764  Sum_probs=55.3

Q ss_pred             hhccCCCceeCc--cchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhc
Q psy12639          6 MLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHT   66 (134)
Q Consensus         6 ~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   66 (134)
                      .++.++++|.|+  .|++.|.....|..|++. |.+.++|.|..|++.|.....|..|++.|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHh-hCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            357889999998  599999999999999987 999999999999999999999999998873

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.51  E-value=8.9e-15  Score=85.92  Aligned_cols=63  Identities=17%  Similarity=0.317  Sum_probs=57.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      .|+ .|.+++||.|..|++.|.....|..|+++ |  .+||.|..|++.|.....|..|++.|++..
T Consensus        65 ~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           65 RLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRY-T--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHH-HHHHHCSEECTTTCCEESSHHHHHHHHHH-T--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             HHH-HhCCCCCeECCCCCcccCCHhHHHHHHHH-C--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            454 68889999999999999999999999987 7  789999999999999999999999998753

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.50  E-value=3e-14  Score=77.55  Aligned_cols=74  Identities=24%  Similarity=0.292  Sum_probs=65.6

Q ss_pred             ceec--CCCCCccCChhhHHhHHhhhcCCCCcccCc--cchhhcCHHHHHHHHHhhcCCCCCCCC-----CCCcccchhh
Q psy12639         42 MYEC--CHCARSFPCKSYLIPHLRVHTGEKPYACNL--CTVRYLRSYELVLHLKKCHREDARNPY-----APAFVDVNTV  112 (134)
Q Consensus        42 ~~~C--~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~-----~~~~~~~~~~  112 (134)
                      ||.|  ..|++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|++   +.|.     +..|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6889  889999999999999999999999999988  99999999999999999988   4443     5578888888


Q ss_pred             hhhhhh
Q psy12639        113 AQVKQE  118 (134)
Q Consensus       113 ~~~~~~  118 (134)
                      ..|...
T Consensus        78 ~~H~~~   83 (85)
T 2j7j_A           78 LKHVAE   83 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            887653

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=5.1e-17  Score=86.35  Aligned_cols=70  Identities=16%  Similarity=0.215  Sum_probs=62.8

Q ss_pred             hHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCCC
Q psy12639         26 NSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPYA  103 (134)
Q Consensus        26 ~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  103 (134)
                      ...|..|++. |.++++|.|..|++.|.....|..       +++|.|+.|++.|.....|..|+++|+++++|.|..
T Consensus         3 ~~~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            3 SGSSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCSCCCCCCC-CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             chhHHHHHHH-hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            3457789886 999999999999999999888765       789999999999999999999999999999998863

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.8e-14  Score=75.15  Aligned_cols=56  Identities=23%  Similarity=0.350  Sum_probs=35.8

Q ss_pred             CCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC-ccchhhcCHHHHHHHHHhhcCC
Q psy12639         39 TGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN-LCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        39 ~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +.++|.|..|++.|. ...|..|++. .+++||.|+ .|++.|...+.|..|+++|...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            455666666666666 6666666666 666666666 6666666666666666665443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2e-14  Score=69.57  Aligned_cols=45  Identities=24%  Similarity=0.380  Sum_probs=32.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|+.|++.|.....|..|++. |.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGG-GCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            466677777777777777777777777777765 777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.1e-14  Score=70.48  Aligned_cols=45  Identities=29%  Similarity=0.482  Sum_probs=29.6

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHH-HcCCCCCCCCCC
Confidence            456666666666666666666666666666665 666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.8e-14  Score=69.73  Aligned_cols=45  Identities=31%  Similarity=0.442  Sum_probs=30.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-HTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHH-TSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            466666666777777777777777777777665 666666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.3e-14  Score=69.38  Aligned_cols=45  Identities=27%  Similarity=0.465  Sum_probs=30.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGG-GSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHH-hcCCCCCCCCCC
Confidence            456666666777777777777777777777665 666666666655

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.2e-14  Score=69.41  Aligned_cols=45  Identities=29%  Similarity=0.509  Sum_probs=31.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHT-TSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            466667777777777777777777777777765 777777777665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.6e-14  Score=69.91  Aligned_cols=45  Identities=22%  Similarity=0.275  Sum_probs=31.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTT-TSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            466667777777777777777777777777765 667777777665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.47  E-value=2.1e-14  Score=69.47  Aligned_cols=45  Identities=29%  Similarity=0.432  Sum_probs=32.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGG-SSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            466677777777777777777777777777765 777777777665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.3e-14  Score=69.35  Aligned_cols=45  Identities=29%  Similarity=0.499  Sum_probs=32.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGG-GSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            466777777777777777777777777777765 777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.47  E-value=2.4e-14  Score=69.29  Aligned_cols=45  Identities=29%  Similarity=0.437  Sum_probs=29.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|+.|++.|.....|..|++. |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-HVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGG-GSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHH-cCCCCCcCCCCC
Confidence            456666666666666666666666666666665 666666666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.4e-14  Score=69.28  Aligned_cols=45  Identities=33%  Similarity=0.485  Sum_probs=28.2

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGG-TSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhh-cCCCCCCCCCCC
Confidence            355566666666666666666666666666654 666666666654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.4e-14  Score=69.25  Aligned_cols=45  Identities=31%  Similarity=0.379  Sum_probs=30.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH-CCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHh-cCCCCCCCCCCC
Confidence            456666677777777777777777777777665 666667766655

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.46  E-value=2.6e-14  Score=69.16  Aligned_cols=45  Identities=33%  Similarity=0.469  Sum_probs=29.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTG-GGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            455666666666666666666666666666665 666666666654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.46  E-value=2.2e-14  Score=69.43  Aligned_cols=45  Identities=29%  Similarity=0.454  Sum_probs=25.9

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHH-HSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            355555555566666666666666556666554 555555555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.8e-14  Score=69.05  Aligned_cols=45  Identities=31%  Similarity=0.415  Sum_probs=32.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-HVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHH-CCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            466677777777777777777777777777765 777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.5e-14  Score=69.22  Aligned_cols=45  Identities=24%  Similarity=0.360  Sum_probs=25.9

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHH-HSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            355555555666666666666666666666554 555555555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.2e-14  Score=68.85  Aligned_cols=45  Identities=31%  Similarity=0.476  Sum_probs=29.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGG-TSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            355666666666666666666666666666665 666666666654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.5e-14  Score=69.21  Aligned_cols=45  Identities=29%  Similarity=0.426  Sum_probs=27.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRT-HAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHH-HTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHH-cCCCCCCCCCCC
Confidence            355566666666666666666666666666654 666666666554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.8e-14  Score=69.00  Aligned_cols=45  Identities=33%  Similarity=0.466  Sum_probs=29.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGG-GSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            455666666666666666666666666666664 666666666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.9e-14  Score=68.99  Aligned_cols=45  Identities=31%  Similarity=0.425  Sum_probs=29.6

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTT-TTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            456666666666666666666666666666665 666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.2e-14  Score=68.86  Aligned_cols=45  Identities=33%  Similarity=0.463  Sum_probs=29.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      .|+++|.+++||.|+.|++.|.....|..|++. |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTT-TCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhh-cCCCCCCCCCCC
Confidence            355666666666666666666666666666665 666666666655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.5e-14  Score=69.24  Aligned_cols=45  Identities=31%  Similarity=0.524  Sum_probs=28.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHH-HSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHH-HCCCCCCCCCCC
Confidence            455566666666666666666666666666654 666666666554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.5e-14  Score=69.23  Aligned_cols=45  Identities=31%  Similarity=0.429  Sum_probs=27.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHH-HHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            355566666666666666666666666666654 666666666554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.6e-14  Score=69.19  Aligned_cols=45  Identities=27%  Similarity=0.379  Sum_probs=26.6

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHH-TTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            355556666666666666666666666666554 556566666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.3e-14  Score=69.35  Aligned_cols=45  Identities=29%  Similarity=0.420  Sum_probs=27.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHH-HHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            455566666666666666666666666666654 666666666554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.45  E-value=4e-14  Score=68.46  Aligned_cols=45  Identities=31%  Similarity=0.406  Sum_probs=30.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGG-GTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            456666667777777777777777777777665 666666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.6e-14  Score=68.66  Aligned_cols=45  Identities=36%  Similarity=0.479  Sum_probs=29.8

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTT-TCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            355666666666666666666666666666665 666666666655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3e-14  Score=68.94  Aligned_cols=45  Identities=27%  Similarity=0.430  Sum_probs=32.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGG-GSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            466677777777777777777777777777765 777777777665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3e-14  Score=68.94  Aligned_cols=45  Identities=33%  Similarity=0.495  Sum_probs=29.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTT-TTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            455666666666666666666666666666654 666666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.2e-14  Score=68.80  Aligned_cols=45  Identities=31%  Similarity=0.516  Sum_probs=25.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHH-HSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            345555555555555555555555555555554 555555555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.4e-14  Score=68.73  Aligned_cols=45  Identities=29%  Similarity=0.478  Sum_probs=27.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHH-HTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHH-cCCCCCCCCCCC
Confidence            355566666666666666666666666666654 666666666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=3.8e-14  Score=67.93  Aligned_cols=44  Identities=23%  Similarity=0.411  Sum_probs=25.7

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQT-HAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHH-HTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            34555556666666666666666666666554 555556655554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=3.8e-14  Score=68.56  Aligned_cols=45  Identities=27%  Similarity=0.349  Sum_probs=29.8

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTT-TCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            456666666666676676666666666666664 666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5e-14  Score=68.14  Aligned_cols=44  Identities=27%  Similarity=0.354  Sum_probs=28.4

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|+.|++.|.....|..|++. |++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGG-GTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            55566666666666666666666666666654 666666666655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.44  E-value=3.6e-14  Score=68.68  Aligned_cols=44  Identities=32%  Similarity=0.515  Sum_probs=24.6

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHH-HSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            45555555555555555555555555555554 555555555544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3e-14  Score=68.96  Aligned_cols=45  Identities=29%  Similarity=0.446  Sum_probs=30.8

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.+++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHH-HSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHH-cCCCCCCCCCCC
Confidence            456666777777777777777777777777665 666667776665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4.8e-14  Score=68.21  Aligned_cols=44  Identities=23%  Similarity=0.417  Sum_probs=26.1

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|+++ |.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGG-GGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            45555666666666666666666666666554 555556666554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.8e-14  Score=69.05  Aligned_cols=45  Identities=36%  Similarity=0.534  Sum_probs=27.9

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHH-HHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            355566666666666666666666666666654 666666666554

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=9.3e-14  Score=72.36  Aligned_cols=60  Identities=20%  Similarity=0.378  Sum_probs=54.0

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCCceecC-CCCCccCChhhHHhHHhhhcCCCC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC-HCARSFPCKSYLIPHLRVHTGEKP   70 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~-~C~~~~~~~~~l~~h~~~h~~~~~   70 (134)
                      .-+++||.|..|++.|. ...|..|+++  ++++||.|. .|++.|.....|..|++.|....+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~--~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ--CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH--CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH--cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35678999999999999 9999999985  789999999 999999999999999998876554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.2e-14  Score=68.07  Aligned_cols=45  Identities=31%  Similarity=0.454  Sum_probs=30.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTT-TTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            466667777777777777777777777777765 666667766653

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.7e-14  Score=67.93  Aligned_cols=44  Identities=23%  Similarity=0.396  Sum_probs=27.7

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTT-TTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            55566666666666666666666666666654 666666666554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=4.8e-14  Score=68.20  Aligned_cols=45  Identities=27%  Similarity=0.443  Sum_probs=31.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      .|+++|.+++||.|+.|++.|.....|..|++. |+++++|.|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTT-SCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHh-hCCCCCCCCCCC
Confidence            356667777777777777777777777777765 777777777665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.43  E-value=6.8e-14  Score=67.68  Aligned_cols=45  Identities=22%  Similarity=0.463  Sum_probs=29.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            355666666666666666666666666666665 666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5.8e-14  Score=67.93  Aligned_cols=44  Identities=30%  Similarity=0.459  Sum_probs=26.6

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT-TCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            45556666666666666666666666666654 666666666554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=6.3e-14  Score=67.78  Aligned_cols=45  Identities=27%  Similarity=0.360  Sum_probs=29.2

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            355666666666666666666666666666665 666666666655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=5.6e-14  Score=67.95  Aligned_cols=45  Identities=22%  Similarity=0.172  Sum_probs=28.2

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVL-HMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHH-HSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            355566666666666666666666666666654 666666666554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=6.7e-14  Score=67.93  Aligned_cols=45  Identities=31%  Similarity=0.465  Sum_probs=28.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHh-ccccCCCceecCCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYN-LAHCTGEMYECCHC   48 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~h~~~~~~~C~~C   48 (134)
                      +|+++|.+++||.|..|++.|.....|..|++ . |++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~-H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYY-HTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTT-TTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhh-cCCCCCCCCCCC
Confidence            35566666666666666666666666666665 4 666666666654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.41  E-value=2.4e-13  Score=71.90  Aligned_cols=57  Identities=37%  Similarity=0.658  Sum_probs=43.2

Q ss_pred             ccCCCceecCC--CCCccCChhhHHhHHhhhcCCCCcccCc--cchhhcCHHHHHHHHHhh
Q psy12639         37 HCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEKPYACNL--CTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        37 h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~   93 (134)
                      ....++|.|..  |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44556778877  8888888888888888888888888854  888888888888887653

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.41  E-value=2.1e-14  Score=74.00  Aligned_cols=53  Identities=13%  Similarity=0.294  Sum_probs=43.0

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhh
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSY   57 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~   57 (134)
                      |..|+++|.+++||.|+.|++.|.....|.   +. |.++++|.|..|++.|.....
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~-H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LF-DPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HE-ETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hh-cCCCCCEECCCCCCccccCcc
Confidence            567888888889999999999998877775   44 888888999999888866554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=7.7e-14  Score=67.50  Aligned_cols=44  Identities=32%  Similarity=0.433  Sum_probs=23.5

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHH-HHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            44455555555555555555555555555554 555555555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8.8e-14  Score=67.27  Aligned_cols=44  Identities=25%  Similarity=0.492  Sum_probs=23.9

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-HTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHH-HHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHH-HcCCCCCCCCCC
Confidence            44455555555555555555555555555554 555555555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.40  E-value=1.9e-13  Score=66.05  Aligned_cols=44  Identities=36%  Similarity=0.549  Sum_probs=31.2

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSS-GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCc-cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 6677777777777777777777777777777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.8e-13  Score=66.07  Aligned_cols=44  Identities=32%  Similarity=0.437  Sum_probs=33.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSS-GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSC-SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCC-cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777766

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.8e-13  Score=66.14  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=32.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSS-GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcC-CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.9e-13  Score=66.01  Aligned_cols=44  Identities=27%  Similarity=0.489  Sum_probs=33.0

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSS-GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCC-cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.2e-13  Score=65.75  Aligned_cols=44  Identities=30%  Similarity=0.424  Sum_probs=32.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSS-GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCC-CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCC-CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.2e-13  Score=65.18  Aligned_cols=44  Identities=27%  Similarity=0.486  Sum_probs=31.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         1 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSG-SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCC-CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCC-cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444 6677777777777777777777777777777777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.39  E-value=2.1e-13  Score=65.88  Aligned_cols=44  Identities=30%  Similarity=0.483  Sum_probs=32.2

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSS-GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSS-CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccC-CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2e-13  Score=65.95  Aligned_cols=44  Identities=34%  Similarity=0.526  Sum_probs=32.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSS-GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCC-CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777765

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.39  E-value=2.7e-13  Score=65.53  Aligned_cols=44  Identities=27%  Similarity=0.460  Sum_probs=34.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSS-GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCC-CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5555 7777888888888888888888888888888888888766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.39  E-value=1.8e-13  Score=66.09  Aligned_cols=44  Identities=36%  Similarity=0.495  Sum_probs=31.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSS-GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccC-CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=3.8e-13  Score=67.28  Aligned_cols=45  Identities=29%  Similarity=0.568  Sum_probs=21.9

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHh-hhcCCCCcccCccchhhc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLR-VHTGEKPYACNLCTVRYL   81 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C~~~f~   81 (134)
                      |.++++|.|..|++.|.....|..|++ .|.++++|.|+.|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            334444555555555555555555543 444455555555555443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.1e-13  Score=65.92  Aligned_cols=44  Identities=30%  Similarity=0.419  Sum_probs=32.5

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSS-GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSC-SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccc-cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=66.26  Aligned_cols=43  Identities=26%  Similarity=0.472  Sum_probs=25.7

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCH   47 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~   47 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHH-HCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            45556666666666666666666666666654 55666666554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.39  E-value=2.3e-13  Score=65.77  Aligned_cols=44  Identities=27%  Similarity=0.359  Sum_probs=32.0

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSS-GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCc-cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            5554 6777777777777777777777777777777777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.5e-13  Score=65.65  Aligned_cols=44  Identities=34%  Similarity=0.563  Sum_probs=32.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |++. |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSS-GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccc-cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.5e-13  Score=65.60  Aligned_cols=44  Identities=27%  Similarity=0.472  Sum_probs=29.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSS-GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCT-TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccC-CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4544 6666666676676666666666666666666666666654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=65.92  Aligned_cols=44  Identities=30%  Similarity=0.538  Sum_probs=30.7

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSS-GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Cccc-CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 6677777777777777777777777777777777777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=66.07  Aligned_cols=44  Identities=32%  Similarity=0.497  Sum_probs=31.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSS-GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCC-CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.5e-13  Score=65.61  Aligned_cols=44  Identities=25%  Similarity=0.440  Sum_probs=32.3

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSS-GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Cccc-cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.2e-13  Score=65.84  Aligned_cols=44  Identities=32%  Similarity=0.500  Sum_probs=31.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSS-GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Cccc-CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4554 6677777777777777777777777777777777777665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.3e-13  Score=65.19  Aligned_cols=44  Identities=25%  Similarity=0.357  Sum_probs=32.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |++. |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSS-GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSC-CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCC-CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4554 7777777777777777777777777777777777777765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.1e-13  Score=65.91  Aligned_cols=44  Identities=27%  Similarity=0.353  Sum_probs=32.1

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |++. |.++++|.|..|++.|...+.|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSS-GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCC-CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.6e-13  Score=65.52  Aligned_cols=44  Identities=30%  Similarity=0.346  Sum_probs=32.0

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSS-GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCC-CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=65.95  Aligned_cols=44  Identities=30%  Similarity=0.446  Sum_probs=32.0

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSS-GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCC-CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.6e-13  Score=65.56  Aligned_cols=44  Identities=34%  Similarity=0.556  Sum_probs=33.2

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSS-GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccC-CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777766

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.7e-13  Score=65.46  Aligned_cols=44  Identities=30%  Similarity=0.460  Sum_probs=32.2

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSS-GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCT-TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCC-CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2.2e-13  Score=65.86  Aligned_cols=44  Identities=34%  Similarity=0.489  Sum_probs=33.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSS-GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCC-CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 7777778888888888888888888777777777877766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.2e-13  Score=65.24  Aligned_cols=44  Identities=36%  Similarity=0.502  Sum_probs=30.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSS-GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSC-SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCC-CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4554 6667777777777777777777777777777777777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.1e-13  Score=65.27  Aligned_cols=44  Identities=27%  Similarity=0.436  Sum_probs=31.4

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSS-GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCC-cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4554 6677777777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.6e-13  Score=65.54  Aligned_cols=44  Identities=34%  Similarity=0.480  Sum_probs=31.4

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |++. |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSS-GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCS-CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             Cccc-cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 6677777777777777777777777777777777777665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.4e-13  Score=65.13  Aligned_cols=44  Identities=32%  Similarity=0.525  Sum_probs=32.5

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSS-GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCC-CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4554 7777777777777777777777777777777777777765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=5.6e-13  Score=66.65  Aligned_cols=48  Identities=23%  Similarity=0.423  Sum_probs=43.7

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCC
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPC   54 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~   54 (134)
                      .|.+++||.|..|++.|.....|..|++..|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            567889999999999999999999999733999999999999999975

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.5e-13  Score=65.61  Aligned_cols=44  Identities=32%  Similarity=0.501  Sum_probs=32.3

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSS-GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCC-CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcC-CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.8e-13  Score=64.96  Aligned_cols=44  Identities=36%  Similarity=0.650  Sum_probs=32.5

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSS-GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSC-SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcC-cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4554 7777777777777777777777777777777777777765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.37  E-value=3.4e-13  Score=65.09  Aligned_cols=44  Identities=34%  Similarity=0.532  Sum_probs=31.9

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSS-GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCS-CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCC-CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.1e-13  Score=65.26  Aligned_cols=44  Identities=30%  Similarity=0.433  Sum_probs=32.4

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSS-GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcC-CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.9e-13  Score=66.00  Aligned_cols=43  Identities=28%  Similarity=0.442  Sum_probs=27.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHH-HCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            455666666666666666666666666666655 6666666664

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.8e-13  Score=65.43  Aligned_cols=44  Identities=27%  Similarity=0.259  Sum_probs=33.7

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSS-GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccc-CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 7777778888888888888888888777877778877766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.2e-13  Score=65.82  Aligned_cols=44  Identities=32%  Similarity=0.452  Sum_probs=33.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSS-GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcC-CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5554 7777778888888888888888888777777777877766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3e-13  Score=65.30  Aligned_cols=44  Identities=32%  Similarity=0.474  Sum_probs=31.3

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSS-GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTC-CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccC-CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5554 6777777777777777777777777777777777777665

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=65.61  Aligned_cols=43  Identities=30%  Similarity=0.534  Sum_probs=28.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG-GTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHh-cCCCCCCCCC
Confidence            456666666666666666666666666666665 6666666664

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.9e-13  Score=65.42  Aligned_cols=43  Identities=30%  Similarity=0.493  Sum_probs=29.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTT-TSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            456666677777777777777777777777665 6666666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.1e-13  Score=65.87  Aligned_cols=45  Identities=29%  Similarity=0.443  Sum_probs=36.5

Q ss_pred             HHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         31 IHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        31 ~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSS-GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCC-CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35665 7888888888888888888888888888888888888776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.9e-13  Score=64.91  Aligned_cols=44  Identities=25%  Similarity=0.319  Sum_probs=32.7

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSS-GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Cccc-CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.1e-13  Score=64.89  Aligned_cols=44  Identities=25%  Similarity=0.430  Sum_probs=29.5

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSS-GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCC-CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcC-CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444 6666677777777777777777777766766677766655

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.36  E-value=4.1e-13  Score=63.55  Aligned_cols=41  Identities=29%  Similarity=0.523  Sum_probs=24.5

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|..|++.|.....|..|+++ |.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRT-HAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGG-GCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHh-cCCCCCCCC
Confidence            34555666666666666666666666666654 556566555

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.36  E-value=2.6e-13  Score=65.56  Aligned_cols=43  Identities=30%  Similarity=0.495  Sum_probs=27.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHH-HTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            355566666666666666666666666666654 6666666664

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=4.6e-13  Score=64.64  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=31.7

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSS-GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCC-CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4444 6777777777777777777777777777777777777665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=4.8e-13  Score=64.57  Aligned_cols=44  Identities=20%  Similarity=0.212  Sum_probs=31.0

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |++. |.++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSS-GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCC-SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccc-cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444 6677777777777777777777777777777777777665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.1e-13  Score=65.27  Aligned_cols=43  Identities=35%  Similarity=0.517  Sum_probs=28.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT-TTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHh-hCCCCCCCCC
Confidence            355666666666666666666666666666664 6666666665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.7e-13  Score=64.96  Aligned_cols=43  Identities=33%  Similarity=0.498  Sum_probs=29.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGG-TSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHh-cCCCCCcCCC
Confidence            456666667777777777777777777777665 6666666665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.35  E-value=2.6e-13  Score=67.87  Aligned_cols=50  Identities=18%  Similarity=0.173  Sum_probs=37.2

Q ss_pred             CccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         50 RSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        50 ~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      +.|.....|..|++.|.++++|.|+.|++.|...+.|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666666777777777777777777777777777777777777777665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.2e-13  Score=64.49  Aligned_cols=44  Identities=27%  Similarity=0.358  Sum_probs=32.3

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSS-GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCC-CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCC-CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4444 6777777777777777777777777777777777777765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.5e-13  Score=65.10  Aligned_cols=44  Identities=27%  Similarity=0.423  Sum_probs=33.2

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSS-GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcC-CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            5554 7777777777777777777777777777777777777766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.1e-13  Score=64.82  Aligned_cols=44  Identities=30%  Similarity=0.535  Sum_probs=27.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSS-GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCC-CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444 6666666666666666666666666666666666666543

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=3.2e-13  Score=65.25  Aligned_cols=43  Identities=30%  Similarity=0.447  Sum_probs=27.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS-HTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHH-HSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCCCCCC
Confidence            355566666666666666666666666666654 6666666664

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.35  E-value=5.8e-13  Score=64.30  Aligned_cols=44  Identities=32%  Similarity=0.460  Sum_probs=31.0

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSS-GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCS-SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCC-CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444 6677777777777777777777777777777777777665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.6e-13  Score=65.01  Aligned_cols=43  Identities=30%  Similarity=0.560  Sum_probs=27.8

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGG-GSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            455666666666666666666666666666665 6666666664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.4e-13  Score=65.14  Aligned_cols=43  Identities=35%  Similarity=0.532  Sum_probs=27.2

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGG-GCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            455666666666666666666666666666654 6666666664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.35  E-value=3.6e-13  Score=63.75  Aligned_cols=39  Identities=26%  Similarity=0.529  Sum_probs=20.2

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      +.|.++++|.|+.|++.|.+.+.|..|+++|+++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344455555555555555555555555555555555544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.4e-13  Score=65.11  Aligned_cols=43  Identities=35%  Similarity=0.506  Sum_probs=27.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHH-HCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHH-cCCCCCCCCC
Confidence            355666666666666666666666666666664 6666666664

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.35  E-value=1e-12  Score=69.43  Aligned_cols=58  Identities=26%  Similarity=0.537  Sum_probs=52.4

Q ss_pred             hccCCCceeCcc--chhhccChHHHHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhh
Q psy12639          7 LHTGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVH   65 (134)
Q Consensus         7 ~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h   65 (134)
                      .....++|.|..  |++.|.....|..|++. |.++++|.|.+  |++.|.....|..|++.|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-HTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHH-HSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHh-cCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345678999998  99999999999999987 99999999975  999999999999998765

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.4e-13  Score=64.69  Aligned_cols=43  Identities=33%  Similarity=0.522  Sum_probs=30.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHT-SCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            456667777777777777777777777777765 6777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.5e-13  Score=64.69  Aligned_cols=44  Identities=34%  Similarity=0.505  Sum_probs=30.3

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 h~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSS-GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCC-CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCc-cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4444 6666777777777777777777777777777777777665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=4.3e-13  Score=64.15  Aligned_cols=43  Identities=23%  Similarity=0.397  Sum_probs=30.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHH-CCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHh-cCCCCCCCCC
Confidence            466677777777777777777777777777765 7777777663

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.4e-13  Score=64.68  Aligned_cols=43  Identities=30%  Similarity=0.495  Sum_probs=29.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.+++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTT-TSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            456666777777777777777777777777665 6666666665

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.1e-13  Score=64.47  Aligned_cols=43  Identities=28%  Similarity=0.453  Sum_probs=28.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGG-GCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhH-hCCCCCCCCC
Confidence            356666666666666666666666666666665 6666666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.9e-13  Score=63.24  Aligned_cols=41  Identities=29%  Similarity=0.565  Sum_probs=24.1

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|..|++.|.....|..|+++ |+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKM-HTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHH-TSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHH-hCCCCCCCC
Confidence            34555566666666666666666666666654 555555555

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.9e-13  Score=64.30  Aligned_cols=42  Identities=24%  Similarity=0.324  Sum_probs=28.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKT-HAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGG-GCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCcCC
Confidence            456666666667776677777666666666665 666666665

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.4e-13  Score=65.16  Aligned_cols=43  Identities=28%  Similarity=0.483  Sum_probs=28.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHH-HSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            456666666677777777777776667777665 6666666664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.5e-13  Score=63.75  Aligned_cols=41  Identities=24%  Similarity=0.507  Sum_probs=29.3

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|+.|++.|.....|..|++. |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGG-TSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHH-hCCCCCCCC
Confidence            56667777777777777777777777777765 777777665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.4e-13  Score=65.11  Aligned_cols=43  Identities=35%  Similarity=0.527  Sum_probs=26.5

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT-TSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHh-cCCCCCCCCC
Confidence            355566666666666666666666666666654 6666666654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.2e-13  Score=64.79  Aligned_cols=43  Identities=28%  Similarity=0.492  Sum_probs=27.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT-TSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            355566666666666666666666666666654 6666666664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.7e-13  Score=64.64  Aligned_cols=43  Identities=26%  Similarity=0.398  Sum_probs=27.6

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT-TSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            355666666666666666666666666666654 6666666664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.2e-13  Score=63.80  Aligned_cols=42  Identities=36%  Similarity=0.559  Sum_probs=28.2

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHH-TTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHH-hCCCCCCCC
Confidence            456666666677777777777777777777665 666666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.8e-13  Score=64.92  Aligned_cols=43  Identities=33%  Similarity=0.508  Sum_probs=26.2

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHH-HHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh-cCCCCCCCCC
Confidence            355566666666666666666666666666654 6666666654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7.9e-13  Score=64.04  Aligned_cols=44  Identities=34%  Similarity=0.512  Sum_probs=32.8

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHh-hhcCCCCcccCcc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLR-VHTGEKPYACNLC   76 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C   76 (134)
                      |++. |.++++|.|..|++.|.....|..|++ .|.+++||.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSS-GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCC-CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccc-cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5554 777777777777777777777777777 7777777777765

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.5e-13  Score=64.68  Aligned_cols=43  Identities=33%  Similarity=0.499  Sum_probs=28.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT-TCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            456666666666666666666666666666664 6666666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.9e-13  Score=64.26  Aligned_cols=43  Identities=30%  Similarity=0.463  Sum_probs=30.0

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      .|+++|.+++||.|..|++.|.....|..|++. |.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTT-SSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            466677777777777777777777777777765 7777776663

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.6e-13  Score=62.79  Aligned_cols=39  Identities=28%  Similarity=0.507  Sum_probs=21.3

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      +.|.++++|.|+.|++.|.+.+.|..|+++|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345555555555555555555555555555555555544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.7e-13  Score=64.63  Aligned_cols=42  Identities=24%  Similarity=0.442  Sum_probs=24.5

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHH-HTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            45555555666666666666666666666554 5555555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.6e-13  Score=64.68  Aligned_cols=43  Identities=35%  Similarity=0.551  Sum_probs=25.6

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHH-HTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHH-cCCCCCCCCC
Confidence            355556666666666666666666666666654 5555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=8e-13  Score=63.79  Aligned_cols=43  Identities=28%  Similarity=0.454  Sum_probs=25.0

Q ss_pred             hhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          5 LMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         5 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +++|.+++||.|..|++.|.....|..|++. |.++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTT-TSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            3455555666666666666666666666554 555556665554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.3e-13  Score=64.19  Aligned_cols=42  Identities=26%  Similarity=0.434  Sum_probs=25.3

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH-CSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            45556666666666666666666666666654 5666666554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.3e-13  Score=63.77  Aligned_cols=42  Identities=36%  Similarity=0.498  Sum_probs=25.1

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT-TCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhh-cCCCCCCCC
Confidence            355556666666666666666666666666654 556555555

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-12  Score=63.07  Aligned_cols=43  Identities=30%  Similarity=0.521  Sum_probs=25.6

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCc
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNL   75 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   75 (134)
                      |++. |+++++|.|..|++.|.....|..|++.|.+++||.|+.
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSS-GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCS-CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCC-CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4443 555666666666666666666666666666666666554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=7.2e-13  Score=63.98  Aligned_cols=42  Identities=24%  Similarity=0.452  Sum_probs=22.7

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.6e-13  Score=64.08  Aligned_cols=41  Identities=32%  Similarity=0.575  Sum_probs=20.4

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444445555555555555555555555555555544443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.31  E-value=6.2e-13  Score=64.21  Aligned_cols=41  Identities=29%  Similarity=0.461  Sum_probs=20.4

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444445555555555555555555555555555444443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=8e-13  Score=63.82  Aligned_cols=42  Identities=29%  Similarity=0.418  Sum_probs=25.1

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTT-TTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHh-cCCCCCCCCC
Confidence            45556666666666666666666666666654 5565666554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.3e-13  Score=64.14  Aligned_cols=42  Identities=29%  Similarity=0.403  Sum_probs=30.6

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHH-HCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHH-hCCCCCCCC
Confidence            466677777777777777777777777777765 777777766

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6e-13  Score=64.25  Aligned_cols=42  Identities=36%  Similarity=0.595  Sum_probs=24.1

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555655666666666666665555555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=8.3e-13  Score=63.75  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=23.0

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.1e-13  Score=63.31  Aligned_cols=41  Identities=29%  Similarity=0.519  Sum_probs=22.1

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555555555555555544

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.2e-13  Score=63.95  Aligned_cols=42  Identities=24%  Similarity=0.473  Sum_probs=21.3

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            334444555555555555555555555555555555555443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.5e-13  Score=63.88  Aligned_cols=41  Identities=29%  Similarity=0.494  Sum_probs=20.5

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34444455555555555555555555555555555554443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.6e-13  Score=63.83  Aligned_cols=41  Identities=32%  Similarity=0.519  Sum_probs=20.7

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            34444555555555555555555555555555555555443

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.9e-13  Score=64.29  Aligned_cols=41  Identities=27%  Similarity=0.506  Sum_probs=19.6

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.8e-13  Score=63.79  Aligned_cols=43  Identities=30%  Similarity=0.481  Sum_probs=30.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|++. |.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTT-SCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            466667777777777777777777777777765 7777777665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=1.3e-12  Score=62.77  Aligned_cols=41  Identities=22%  Similarity=0.317  Sum_probs=21.2

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      |+++++|.|..|++.|.....|..|++.|.++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44445555555555555555555555555555555555543

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.4e-13  Score=63.73  Aligned_cols=41  Identities=27%  Similarity=0.498  Sum_probs=20.6

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34444455555555555555555555555555555555443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.1e-13  Score=63.73  Aligned_cols=41  Identities=29%  Similarity=0.569  Sum_probs=20.0

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444444555555555555555555555554444444443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.2e-12  Score=63.22  Aligned_cols=43  Identities=19%  Similarity=0.281  Sum_probs=29.7

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccC-CCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT-GEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~-~~~~~C~   46 (134)
                      .|+++|.+++||.|..|++.|.....|..|+++ |++ +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            356667777777777777777777777777765 666 6677664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.1e-13  Score=63.60  Aligned_cols=41  Identities=22%  Similarity=0.428  Sum_probs=21.3

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      |++.|.+++||.|+.|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            34444555555555555555555555555555555555544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.5e-13  Score=63.88  Aligned_cols=38  Identities=34%  Similarity=0.626  Sum_probs=19.0

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            44444555555555555555555555555555555443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.6e-13  Score=64.37  Aligned_cols=43  Identities=30%  Similarity=0.522  Sum_probs=25.9

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH-HHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            355556666666666666666666666666654 5566666554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.6e-13  Score=63.41  Aligned_cols=40  Identities=28%  Similarity=0.479  Sum_probs=19.2

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            3344444444444444444444444445444444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.5e-13  Score=63.66  Aligned_cols=42  Identities=29%  Similarity=0.498  Sum_probs=21.3

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444555555555555555555555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=63.23  Aligned_cols=41  Identities=24%  Similarity=0.436  Sum_probs=21.7

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34455555555555555555555555555555555555543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.4e-13  Score=64.41  Aligned_cols=43  Identities=28%  Similarity=0.393  Sum_probs=28.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      +|+++|.+++||.|..|++.|.....|..|+++ |.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHH-HHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            456666666666666666666666666666665 6666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.2e-13  Score=63.75  Aligned_cols=38  Identities=32%  Similarity=0.640  Sum_probs=19.1

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |.++++|.|..|++.|.....|..|++.|.++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444555555555555555555555555555555443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=1.3e-12  Score=61.70  Aligned_cols=41  Identities=20%  Similarity=0.394  Sum_probs=24.2

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|..|++.|.....|..|+++ |++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHH-TTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhh-cCCCCCCCC
Confidence            34555566666666666666666666666654 555555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.6e-13  Score=63.89  Aligned_cols=38  Identities=32%  Similarity=0.517  Sum_probs=19.9

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |+++++|.|..|++.|.....|..|++.|.++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            45555555555555555555555555555555555443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.6e-13  Score=63.23  Aligned_cols=41  Identities=29%  Similarity=0.453  Sum_probs=22.3

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34445555555555555555555555555555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=2.7e-12  Score=61.59  Aligned_cols=42  Identities=24%  Similarity=0.457  Sum_probs=32.6

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCC
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCA   49 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~   49 (134)
                      +|.+++||.|..|++.|.....|..|+++ |+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHH-HSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHH-ccCCCCCCCcCCC
Confidence            56777788888888888888888888776 7777788887775

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.1e-13  Score=63.56  Aligned_cols=38  Identities=42%  Similarity=0.615  Sum_probs=19.6

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |.++++|.|..|++.|.....|..|++.|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            44555555555555555555555555555555555443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.9e-13  Score=63.83  Aligned_cols=40  Identities=30%  Similarity=0.443  Sum_probs=20.1

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |.++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444455555555555555555555555555555555443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.1e-13  Score=63.75  Aligned_cols=37  Identities=35%  Similarity=0.648  Sum_probs=18.2

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCccc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYAC   73 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   73 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4444444555555545444444445444444444444

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.2e-13  Score=63.53  Aligned_cols=41  Identities=27%  Similarity=0.531  Sum_probs=20.5

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444455555555555555555555555555555554443

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.6e-13  Score=63.66  Aligned_cols=38  Identities=34%  Similarity=0.592  Sum_probs=18.7

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            44444455555555555555555554444444444443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=63.40  Aligned_cols=38  Identities=39%  Similarity=0.632  Sum_probs=18.7

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |.++++|.|..|++.|.....|..|++.|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44444455555555555555555554444444444443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.1e-12  Score=62.06  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=23.1

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT-TSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHh-cCCCCCCCC
Confidence            34455555556666666666655555556554 555555544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1e-12  Score=62.77  Aligned_cols=40  Identities=18%  Similarity=0.292  Sum_probs=19.4

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|.++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3444444445555555555555555555544444444444

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1e-12  Score=63.44  Aligned_cols=41  Identities=34%  Similarity=0.512  Sum_probs=20.0

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            33444444555555555555555555555444444444443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.9e-13  Score=63.59  Aligned_cols=38  Identities=37%  Similarity=0.684  Sum_probs=19.1

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |.++++|.|..|++.|.....|..|++.|.+++||.|+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44444555555555555555555555555555555443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.9e-12  Score=61.86  Aligned_cols=42  Identities=31%  Similarity=0.434  Sum_probs=30.3

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      +|+++|.+++||.|.+|++.|.....|..|++. |++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERT-HAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGG-GSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhH-hcCCCCCCC
Confidence            466677777777777777777777777777765 777777665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.2e-12  Score=62.25  Aligned_cols=40  Identities=23%  Similarity=0.301  Sum_probs=20.1

Q ss_pred             cCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCC
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCA   49 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~   49 (134)
                      .++++|.|.+|++.|.....|..|+++ |+++++|.|.+|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGG-SCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHh-cCCCCCccCCCCC
Confidence            344455555555555555555555543 4455555555544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=2.3e-12  Score=62.74  Aligned_cols=42  Identities=29%  Similarity=0.384  Sum_probs=37.0

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccch
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTV   78 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   78 (134)
                      +.++++|.|..|++.|.....|..|++.|.++++|.|+.|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            667788999999999999999999999999999999998875

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.5e-13  Score=62.25  Aligned_cols=41  Identities=24%  Similarity=0.451  Sum_probs=22.5

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHH-HHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHH-cCCCCCCCC
Confidence            34455555555555555555555555555554 555555544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.9e-12  Score=62.48  Aligned_cols=42  Identities=26%  Similarity=0.452  Sum_probs=25.4

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      |+++|.+++||.|..|++.|.....|..|++. |.++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGG-SCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            44556666666666666666666666666654 6666666554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.3e-13  Score=62.85  Aligned_cols=40  Identities=23%  Similarity=0.498  Sum_probs=19.6

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444555555555555555555555555544444443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.28  E-value=1.5e-12  Score=61.54  Aligned_cols=40  Identities=23%  Similarity=0.541  Sum_probs=22.5

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|...+.|..|+++|+++++|.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3445555555555555555555555555555555555544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.9e-13  Score=63.46  Aligned_cols=42  Identities=31%  Similarity=0.540  Sum_probs=23.2

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.7e-13  Score=62.22  Aligned_cols=40  Identities=25%  Similarity=0.471  Sum_probs=21.4

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|.+...|..|+++|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3445555555555555555555555555555555555443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.1e-12  Score=62.07  Aligned_cols=40  Identities=28%  Similarity=0.513  Sum_probs=21.5

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|...+.|..|+++|+++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3445555555555555555555555555555555555443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.6e-12  Score=62.10  Aligned_cols=41  Identities=24%  Similarity=0.462  Sum_probs=26.0

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      |++.|.++++|.|+.|++.|...+.|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44556666666666666666666666666666666666554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=63.20  Aligned_cols=42  Identities=29%  Similarity=0.437  Sum_probs=22.9

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.5e-12  Score=61.42  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=22.9

Q ss_pred             HhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         62 LRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        62 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3445555555555555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.2e-12  Score=61.59  Aligned_cols=40  Identities=38%  Similarity=0.553  Sum_probs=29.3

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++++|.|..|++.|.....|..|++.|.++++|.|+.|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            6667777777777777777777777777777777777665

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.2e-13  Score=63.75  Aligned_cols=42  Identities=33%  Similarity=0.601  Sum_probs=22.2

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.7e-12  Score=61.87  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=28.8

Q ss_pred             hhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          5 LMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         5 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      +++|.+++||.|..|++.|.....|..|++. |.++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWIT-HTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTH-HHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            3456666677777777777777777777665 666666766655

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=62.73  Aligned_cols=37  Identities=38%  Similarity=0.658  Sum_probs=18.5

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCccc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYAC   73 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   73 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4444455555555555555555555555544455444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.5e-12  Score=61.45  Aligned_cols=41  Identities=22%  Similarity=0.247  Sum_probs=20.5

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      |+++|.+++||.|..|++.|.....|..|+++ |+++++|.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQAL-HAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH-HTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-HCCCCCCCC
Confidence            33444555555555555555555555555543 445445444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.25  E-value=1.3e-13  Score=70.96  Aligned_cols=52  Identities=10%  Similarity=0.206  Sum_probs=44.8

Q ss_pred             HHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHH
Q psy12639         30 KIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYE   85 (134)
Q Consensus        30 ~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~   85 (134)
                      ..|++. |++++||.|+.|++.|.....|.   +.|.++++|.|+.|++.|....+
T Consensus         3 ~~h~~~-H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDERD-STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCSSS-CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhHHHH-cCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            457776 99999999999999999888776   77999999999999999987654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.24  E-value=1.5e-12  Score=65.03  Aligned_cols=51  Identities=14%  Similarity=0.100  Sum_probs=42.8

Q ss_pred             hhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCc
Q psy12639         20 DQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPY   71 (134)
Q Consensus        20 ~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   71 (134)
                      ++.|.....|..|++. |+++++|.|..|++.|...+.|..|++.|.+++||
T Consensus         3 ~k~~~~~~~l~~h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSR-SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHH-HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHh-cCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3567777788888886 88888899999999999888999998888888876

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.8e-12  Score=61.05  Aligned_cols=41  Identities=27%  Similarity=0.489  Sum_probs=25.6

Q ss_pred             hhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639          5 LMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         5 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      ..+|.+++||.|..|++.|.....|..|++. |+++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTT-TSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHH-hCCCCCCCCC
Confidence            3455666666666666666666666666654 6666666664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.2e-12  Score=62.56  Aligned_cols=37  Identities=22%  Similarity=0.440  Sum_probs=18.2

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCccc
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYAC   73 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   73 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4444445555555555555555555544444444443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.2e-12  Score=61.34  Aligned_cols=43  Identities=30%  Similarity=0.426  Sum_probs=25.8

Q ss_pred             hhhccCCCceeCc--cchhhccChHHHHHHHhccccCCCceecCCC
Q psy12639          5 LMLHTGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHC   48 (134)
Q Consensus         5 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C   48 (134)
                      .++|.+++||.|.  .|++.|.....|..|+++ |+++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTT-SCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            3455666666665  566666666666666654 666666666554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=6.7e-12  Score=60.47  Aligned_cols=42  Identities=26%  Similarity=0.559  Sum_probs=23.9

Q ss_pred             HHhccccCCCceecCCCCCccCChhhHHhHHhhhcC-CCCcccC
Q psy12639         32 HYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTG-EKPYACN   74 (134)
Q Consensus        32 h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~-~~~~~C~   74 (134)
                      |+++ |.++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSS-GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCC-CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             Cccc-cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3443 5555556666666666665566666555555 5555554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.2e-12  Score=68.16  Aligned_cols=62  Identities=24%  Similarity=0.373  Sum_probs=31.0

Q ss_pred             HHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         30 KIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        30 ~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      ..|+.. +.+.+++.|..|+..|. ...|..|+ .+.+++++.|+.|++.|. ...|..|+++|.+
T Consensus         6 ~~H~~~-~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            6 SGHEET-ECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             SCCCCC-CCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             HhhCcc-cCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            344433 44555555555555552 44555555 455555555555555444 2455555555444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.3e-11  Score=59.46  Aligned_cols=39  Identities=21%  Similarity=0.394  Sum_probs=21.4

Q ss_pred             hhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         64 VHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        64 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.5e-11  Score=57.71  Aligned_cols=38  Identities=24%  Similarity=0.541  Sum_probs=22.6

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccCCCceec
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYEC   45 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C   45 (134)
                      +|.+++||.|+.|++.|.....|..|++. |++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGG-CCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHH-hCCCCCcCC
Confidence            45556666666666666666666666654 556555554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=59.75  Aligned_cols=38  Identities=34%  Similarity=0.530  Sum_probs=19.2

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |.++++|.|..|++.|.....|..|++.|.+++||.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            44444555555555555555555555555555555443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.3e-11  Score=57.93  Aligned_cols=37  Identities=19%  Similarity=0.414  Sum_probs=19.4

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      |.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4445555555555555555555555555555555443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=1.3e-11  Score=58.56  Aligned_cols=38  Identities=16%  Similarity=0.247  Sum_probs=21.0

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44555555555555555555555555555555555553

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=2.1e-11  Score=57.83  Aligned_cols=40  Identities=20%  Similarity=0.401  Sum_probs=37.3

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCCC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNPY  102 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  102 (134)
                      +.|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4578899999999999999999999999999999999885

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=60.11  Aligned_cols=38  Identities=26%  Similarity=0.478  Sum_probs=19.4

Q ss_pred             hhcCCCCcccCccchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         64 VHTGEKPYACNLCTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        64 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            34444555555555555555555555555555555544

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.6e-11  Score=58.76  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=30.3

Q ss_pred             ccCCCceecC--CCCCccCChhhHHhHHhhhcCCCCcccCcc
Q psy12639         37 HCTGEMYECC--HCARSFPCKSYLIPHLRVHTGEKPYACNLC   76 (134)
Q Consensus        37 h~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   76 (134)
                      |+++++|.|.  .|++.|.....|..|++.|.+++||.|..|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6777777776  677777777777777777777777777765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=3e-12  Score=68.29  Aligned_cols=65  Identities=25%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             ChhHhhhccCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCC
Q psy12639          1 MESHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus         1 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      |..|+.++.+++|+.|..|++.|. ...|..|+ . +.+.+++.|..|++.|. ...|..|+..+.+++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~-~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-D-YCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-H-HHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-h-HcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            567888899999999999999994 88999999 5 89999999999999877 588999999887654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.06  E-value=5.1e-11  Score=54.49  Aligned_cols=35  Identities=37%  Similarity=0.555  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      |++.|.+++||.|+.|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45667777777777777777777777777777664

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=6.8e-11  Score=54.05  Aligned_cols=35  Identities=20%  Similarity=0.447  Sum_probs=25.7

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +.|.++++|.|+.|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34667777777777777777777777777777664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=5.2e-12  Score=69.37  Aligned_cols=39  Identities=23%  Similarity=0.451  Sum_probs=19.0

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCCceecCC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCH   47 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~   47 (134)
                      |.+++||.|..|++.|.....|..|+++ |++++||.|..
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~-Ht~ekp~~C~~   58 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNI-HNEEFQKRAKR   58 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHH-HHHHHHHHCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHH-hCCCCCcccch
Confidence            4444455555555555555555555443 44444444443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.04  E-value=1.7e-10  Score=53.41  Aligned_cols=34  Identities=24%  Similarity=0.492  Sum_probs=18.8

Q ss_pred             cCCCCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         66 TGEKPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        66 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      .++++|.|+.|++.|...+.|..|+++|+++++|
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            3445555555555555555555555555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.00  E-value=2.7e-10  Score=51.28  Aligned_cols=33  Identities=27%  Similarity=0.675  Sum_probs=22.9

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      |.++++|.|+.|++.|...+.|..|++.|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            456667777777777777777777777766654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=2.9e-10  Score=58.79  Aligned_cols=38  Identities=24%  Similarity=0.461  Sum_probs=18.1

Q ss_pred             cCCCceeCcc--chhhccChHHHHHHHhccccCCCceecC
Q psy12639          9 TGAKPYACTE--CDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus         9 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      .+++||.|.+  |+++|....+|..|++..|++++|+.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3445555543  5555555555555542125555555443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.98  E-value=3.5e-10  Score=50.95  Aligned_cols=33  Identities=21%  Similarity=0.527  Sum_probs=21.6

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      |.++++|.|..|++.|...+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            455666666666666666666666666666554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.98  E-value=4.7e-10  Score=51.84  Aligned_cols=35  Identities=23%  Similarity=0.436  Sum_probs=18.2

Q ss_pred             cCCCceeCccchhhccChHHHHHHHhccccCCCcee
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYE   44 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~   44 (134)
                      .+++||.|..|++.|.....|..|+++ |+++++|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNV-HRRDRARL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHT-TCCSCTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHH-cCCCccce
Confidence            344555555555555555555555554 55555443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.98  E-value=2.3e-10  Score=52.25  Aligned_cols=35  Identities=34%  Similarity=0.723  Sum_probs=23.5

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      |+++|.+++||.|+.|++.|.....|..|++. |.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH-hcc
Confidence            55666677777777777777777777777665 544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.5e-10  Score=52.11  Aligned_cols=35  Identities=17%  Similarity=0.472  Sum_probs=20.7

Q ss_pred             hhccCCCceeCccchhhccChHHHHHHHhccccCCC
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGE   41 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~   41 (134)
                      ++|.+++||.|..|++.|.....|..|++. |++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcCCC
Confidence            345566666666666666666666666654 55543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=1.1e-11  Score=68.02  Aligned_cols=55  Identities=20%  Similarity=0.321  Sum_probs=44.2

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      |+++++|.|..|++.|.....|..|++.|.+++||.|..|.+    ...|..|.+.+.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            788899999999999999999999999999999999876553    4445566666554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=7.2e-10  Score=57.31  Aligned_cols=38  Identities=18%  Similarity=0.327  Sum_probs=26.4

Q ss_pred             hcCCCCcccCc--cchhhcCHHHHHHHH-HhhcCCCCCCCC
Q psy12639         65 HTGEKPYACNL--CTVRYLRSYELVLHL-KKCHREDARNPY  102 (134)
Q Consensus        65 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~  102 (134)
                      ..+++||.|+.  |+++|...++|..|+ ++|++++|+-|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            35667777754  777777777777776 467777777665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.91  E-value=1.4e-09  Score=48.42  Aligned_cols=31  Identities=26%  Similarity=0.451  Sum_probs=20.9

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      +||.|+.|++.|...+.|..|+++|++++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3566777777777777777777776666655

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=9.9e-10  Score=49.32  Aligned_cols=32  Identities=25%  Similarity=0.491  Sum_probs=18.2

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTG   40 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~   40 (134)
                      |.+++||.|..|++.|.....|..|++. |.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE-VHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH-TSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH-HcCC
Confidence            4455556666666666666666666554 5444

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=9.9e-10  Score=50.60  Aligned_cols=32  Identities=22%  Similarity=0.281  Sum_probs=23.7

Q ss_pred             hcCCCCcccCc--cchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNL--CTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +.+++||.|+.  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677777765  777777777777777777664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.90  E-value=1.2e-09  Score=49.10  Aligned_cols=33  Identities=21%  Similarity=0.554  Sum_probs=18.9

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCCC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGE   41 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~   41 (134)
                      |.+++||.|..|++.|.....|..|++. |++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH-cCCCC
Confidence            4555566666666666666666666554 55443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=48.93  Aligned_cols=32  Identities=31%  Similarity=0.542  Sum_probs=22.0

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            55666777777777777777777777766654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.3e-09  Score=49.33  Aligned_cols=33  Identities=24%  Similarity=0.510  Sum_probs=22.3

Q ss_pred             hhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         64 VHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        64 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      .|.++++|.|+.|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            355666777777777777777777777766554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=7.6e-10  Score=50.55  Aligned_cols=33  Identities=18%  Similarity=0.324  Sum_probs=23.3

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHH-HHhhcC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLH-LKKCHR   95 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~   95 (134)
                      +.|.+++||.|+.|++.|...+.|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            346667777777777777777777777 666654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=2e-09  Score=49.29  Aligned_cols=35  Identities=23%  Similarity=0.421  Sum_probs=23.3

Q ss_pred             hcCCCCcccC--ccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         65 HTGEKPYACN--LCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        65 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      |.++++|.|.  .|++.|...+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3456667776  4777777777777777777666554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.2e-09  Score=49.42  Aligned_cols=32  Identities=13%  Similarity=0.340  Sum_probs=21.3

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.++++|.|..|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            55666677777777777777777776666544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=49.71  Aligned_cols=33  Identities=12%  Similarity=0.357  Sum_probs=21.0

Q ss_pred             hhcCCCCcccCccchhhcCH-HHHHHHHHhhcCC
Q psy12639         64 VHTGEKPYACNLCTVRYLRS-YELVLHLKKCHRE   96 (134)
Q Consensus        64 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~~   96 (134)
                      .|.++++|.|+.|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            35566666666666666666 6666666666544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.7e-09  Score=48.19  Aligned_cols=32  Identities=16%  Similarity=0.280  Sum_probs=22.6

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            55667777777777777777777777777654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.9e-09  Score=49.15  Aligned_cols=33  Identities=21%  Similarity=0.353  Sum_probs=22.6

Q ss_pred             hhccCCCceeCccchhhccChHHHHHH-HhccccC
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIH-YNLAHCT   39 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h-~~~~h~~   39 (134)
                      ++|.+++||.|..|++.|.....|..| ++. |++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~-H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK-HSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH-TCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH-ccC
Confidence            456677777777777777777777777 554 554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=3.8e-09  Score=47.72  Aligned_cols=32  Identities=22%  Similarity=0.405  Sum_probs=22.8

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45667777777777777777777777777654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.78  E-value=6.8e-09  Score=46.04  Aligned_cols=30  Identities=20%  Similarity=0.379  Sum_probs=16.5

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcCCCCc
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTGEKPY   71 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   71 (134)
                      ||.|..|++.|...+.|..|++.|.++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.77  E-value=3.1e-09  Score=51.44  Aligned_cols=33  Identities=33%  Similarity=0.668  Sum_probs=22.1

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHH-hhcCCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLK-KCHRED   97 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~   97 (134)
                      |.++++|.|..|++.|.....|..|++ +|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            556677777777777777777777777 666553

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.7e-09  Score=47.12  Aligned_cols=32  Identities=34%  Similarity=0.634  Sum_probs=18.5

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      .|.+++||.|..|++.|.....|..|++. |++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNR-HST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHH-SST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHH-hcc
Confidence            34555666666666666666666666554 544

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=5.6e-09  Score=47.13  Aligned_cols=31  Identities=23%  Similarity=0.468  Sum_probs=18.2

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      |.+++||.|..|++.|.....|..|+++ |++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLV-HGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTT-TST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHH-hcC
Confidence            4555666666666666666666666554 544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.3e-09  Score=47.84  Aligned_cols=32  Identities=28%  Similarity=0.430  Sum_probs=18.2

Q ss_pred             hccCCCceeCccchhhccCh-HHHHHHHhccccC
Q psy12639          7 LHTGAKPYACTECDQKFNRN-SKLKIHYNLAHCT   39 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~-~~l~~h~~~~h~~   39 (134)
                      +|.+++||.|..|++.|... ..|..|++. |++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~-H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWA-HEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHH-HHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHh-cCC
Confidence            45555566666666666665 556666554 443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.4e-09  Score=46.86  Aligned_cols=31  Identities=26%  Similarity=0.604  Sum_probs=16.2

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      |.+++||.|..|++.|.....|..|++. |++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRK-HTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHH-HTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHH-ccC
Confidence            4455555555555555555555555543 443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=7.7e-09  Score=47.53  Aligned_cols=31  Identities=23%  Similarity=0.435  Sum_probs=16.7

Q ss_pred             ccCCCceeCcc--chhhccChHHHHHHHhccccC
Q psy12639          8 HTGAKPYACTE--CDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         8 h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      +.+++||.|.+  |+++|.....|..|+++ |++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~-Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV-HTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH-HSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCC
Confidence            34555555554  55555555555555554 544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.72  E-value=7.5e-09  Score=50.04  Aligned_cols=32  Identities=31%  Similarity=0.725  Sum_probs=20.4

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHh-ccccCC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYN-LAHCTG   40 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~h~~~   40 (134)
                      |.+++||.|..|++.|.....|..|++ . |+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~-H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHS-HLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHS-SCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhh-cCCC
Confidence            556666666666666666666666666 4 5554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.71  E-value=4.6e-09  Score=47.68  Aligned_cols=25  Identities=24%  Similarity=0.505  Sum_probs=13.5

Q ss_pred             cCCCceeCccchhhccChHHHHHHH
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHY   33 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~   33 (134)
                      .+++||.|+.|+++|.+.++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=1.4e-08  Score=46.40  Aligned_cols=33  Identities=30%  Similarity=0.635  Sum_probs=16.4

Q ss_pred             cCCCceeCc--cchhhccChHHHHHHHhccccCCCc
Q psy12639          9 TGAKPYACT--ECDQKFNRNSKLKIHYNLAHCTGEM   42 (134)
Q Consensus         9 ~~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~   42 (134)
                      .+++||.|.  .|++.|.....|..|++. |+++++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~   36 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK-HEMTLK   36 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHH-HHTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            344555555  255555555555555543 444443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.70  E-value=3.7e-09  Score=48.01  Aligned_cols=25  Identities=16%  Similarity=0.345  Sum_probs=14.4

Q ss_pred             cCCCCcccCccchhhcCHHHHHHHH
Q psy12639         66 TGEKPYACNLCTVRYLRSYELVLHL   90 (134)
Q Consensus        66 ~~~~~~~C~~C~~~f~~~~~l~~H~   90 (134)
                      .+++||.|+.|++.|.+.++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555555

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-08  Score=46.33  Aligned_cols=32  Identities=25%  Similarity=0.314  Sum_probs=19.3

Q ss_pred             hcCCCCcccC--ccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACN--LCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.++++|.|.  .|++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4455666665  3666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.67  E-value=1e-09  Score=48.42  Aligned_cols=31  Identities=32%  Similarity=0.518  Sum_probs=22.7

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      +||.|+.|++.|...+.|..|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4677777777777777777777777776654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.66  E-value=1.7e-09  Score=52.13  Aligned_cols=34  Identities=21%  Similarity=0.462  Sum_probs=18.3

Q ss_pred             hhhcCCCCcccC--ccchhhcCHHHHHHHHHhhcCC
Q psy12639         63 RVHTGEKPYACN--LCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        63 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ..|.+++||.|+  .|++.|...+.|..|+++|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            335555555553  4555555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.65  E-value=7.3e-09  Score=49.83  Aligned_cols=32  Identities=19%  Similarity=0.575  Sum_probs=17.7

Q ss_pred             ccCCCceecC--CCCCccCChhhHHhHHhhhcCC
Q psy12639         37 HCTGEMYECC--HCARSFPCKSYLIPHLRVHTGE   68 (134)
Q Consensus        37 h~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~   68 (134)
                      |.++++|.|.  .|++.|...+.|..|++.|.++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            5555555553  4555555555555555555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=1.8e-08  Score=43.19  Aligned_cols=28  Identities=25%  Similarity=0.618  Sum_probs=19.5

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777766654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.65  E-value=2.5e-08  Score=42.45  Aligned_cols=28  Identities=25%  Similarity=0.615  Sum_probs=20.0

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|+.|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3577777777777777777777777654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.1e-08  Score=45.14  Aligned_cols=28  Identities=21%  Similarity=0.579  Sum_probs=14.1

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhc
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.+++||.|+.|++.|.....|..|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            3344555555555555555555555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=4.2e-08  Score=44.06  Aligned_cols=31  Identities=29%  Similarity=0.508  Sum_probs=14.8

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhhhcC
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      |.++++|.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            3444444454455444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=3.1e-08  Score=51.16  Aligned_cols=33  Identities=15%  Similarity=0.207  Sum_probs=24.0

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +.+++||.|..|++.|.....|..|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            456677777777777777777777777777653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.62  E-value=2.5e-08  Score=42.75  Aligned_cols=29  Identities=34%  Similarity=0.657  Sum_probs=20.5

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      ++|.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35677777777777777777777776654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.62  E-value=1.7e-08  Score=43.04  Aligned_cols=28  Identities=32%  Similarity=0.629  Sum_probs=17.7

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.60  E-value=2.7e-08  Score=42.27  Aligned_cols=28  Identities=29%  Similarity=0.475  Sum_probs=19.1

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ++|.|+.|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3566777777777777777777766654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=2.7e-08  Score=41.76  Aligned_cols=25  Identities=32%  Similarity=0.684  Sum_probs=18.6

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhh
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5677777777777777777777765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.57  E-value=2.4e-08  Score=42.45  Aligned_cols=27  Identities=22%  Similarity=0.352  Sum_probs=16.9

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=4.3e-08  Score=42.83  Aligned_cols=28  Identities=29%  Similarity=0.765  Sum_probs=19.8

Q ss_pred             CCcccC--ccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACN--LCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777776654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.57  E-value=3.5e-09  Score=46.65  Aligned_cols=31  Identities=23%  Similarity=0.447  Sum_probs=21.1

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCCCce
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMY   43 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~   43 (134)
                      +||.|..|++.|.....|..|+++ |++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKT-AFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTS-SSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH-HccCCCC
Confidence            366777777777777777777765 6666654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.57  E-value=2.9e-08  Score=41.99  Aligned_cols=26  Identities=23%  Similarity=0.669  Sum_probs=18.0

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      ++|.|+.|++.|.....|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777766654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=2.1e-08  Score=42.17  Aligned_cols=25  Identities=24%  Similarity=0.554  Sum_probs=18.4

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhh
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5677777777777777777777665

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.56  E-value=4.3e-08  Score=42.52  Aligned_cols=28  Identities=36%  Similarity=0.710  Sum_probs=19.3

Q ss_pred             CCcccC--ccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACN--LCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356676  6777777777777777776654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.53  E-value=4.4e-08  Score=40.96  Aligned_cols=26  Identities=23%  Similarity=0.576  Sum_probs=17.7

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777776654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=9.8e-09  Score=43.90  Aligned_cols=28  Identities=25%  Similarity=0.642  Sum_probs=20.5

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3677777777777777777777777654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.52  E-value=1.1e-07  Score=43.13  Aligned_cols=31  Identities=32%  Similarity=0.461  Sum_probs=14.8

Q ss_pred             ccCCCceecCC--CCCccCChhhHHhHHhhhcC
Q psy12639         37 HCTGEMYECCH--CARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        37 h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~   67 (134)
                      |+++++|.|.+  |++.|...+.|..|++.|.+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34444455542  55555555555555444443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.91  E-value=1.2e-08  Score=43.87  Aligned_cols=28  Identities=29%  Similarity=0.551  Sum_probs=20.9

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677777888887777777777777654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=8.5e-08  Score=40.94  Aligned_cols=27  Identities=33%  Similarity=0.663  Sum_probs=16.5

Q ss_pred             CceeCccchhhccChHHHHHHHhccccC
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      +||.|..|++.|.....|..|++. |.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~-h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLET-HDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHT-TCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHH-hcc
Confidence            456666666666666666666654 544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.48  E-value=9.6e-08  Score=40.55  Aligned_cols=26  Identities=38%  Similarity=0.837  Sum_probs=15.5

Q ss_pred             ceeCccchhhccChHHHHHHHhccccC
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ||.|+.|++.|.....|..|++. |.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~-H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILL-HEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTG-GGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHH-hcC
Confidence            55666666666666666666654 544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.5e-07  Score=39.67  Aligned_cols=24  Identities=29%  Similarity=1.016  Sum_probs=15.6

Q ss_pred             CceeCccchhhccChHHHHHHHhc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      +||.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh
Confidence            466666666666666666666654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.1e-07  Score=39.85  Aligned_cols=24  Identities=21%  Similarity=0.481  Sum_probs=17.1

Q ss_pred             CceeCccchhhccChHHHHHHHhc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      +||.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            567777777777777777777654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=2.7e-08  Score=41.36  Aligned_cols=25  Identities=36%  Similarity=0.861  Sum_probs=18.7

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhh
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777888787777777777765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=1.5e-07  Score=39.36  Aligned_cols=24  Identities=29%  Similarity=0.627  Sum_probs=15.6

Q ss_pred             CceeCccchhhccChHHHHHHHhc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      +||.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            466666666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=8.5e-08  Score=41.07  Aligned_cols=27  Identities=33%  Similarity=0.584  Sum_probs=17.2

Q ss_pred             CcccCccchhhcCHHHHHHH-HHhhcCC
Q psy12639         70 PYACNLCTVRYLRSYELVLH-LKKCHRE   96 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H-~~~~~~~   96 (134)
                      ||.|+.|++.|...+.|..| ++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.41  E-value=2.8e-07  Score=38.99  Aligned_cols=26  Identities=35%  Similarity=0.646  Sum_probs=12.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcC
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34455555555555555555544443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=2.6e-07  Score=39.05  Aligned_cols=23  Identities=35%  Similarity=0.869  Sum_probs=11.4

Q ss_pred             ceeCccchhhccChHHHHHHHhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|..|++.|.....|..|++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHH
Confidence            44555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.37  E-value=3.4e-07  Score=38.62  Aligned_cols=26  Identities=31%  Similarity=0.645  Sum_probs=13.2

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcC
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            44555555555555555555554443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.37  E-value=3.1e-07  Score=39.94  Aligned_cols=27  Identities=41%  Similarity=0.819  Sum_probs=15.5

Q ss_pred             CceeCc--cchhhccChHHHHHHHhccccC
Q psy12639         12 KPYACT--ECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        12 ~~~~C~--~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      +||.|.  .|++.|.....|..|+++ |++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKS-HQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG-GTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHH-ccC
Confidence            455565  566666666666666554 544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=3.8e-07  Score=38.79  Aligned_cols=23  Identities=30%  Similarity=0.619  Sum_probs=11.4

Q ss_pred             ceeCccchhhccChHHHHHHHhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|..|++.|.....|..|++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHHH
Confidence            44455555555555555555443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=5.3e-07  Score=46.46  Aligned_cols=32  Identities=22%  Similarity=0.363  Sum_probs=18.7

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccCC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTG   40 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~   40 (134)
                      +.+++||.|..|++.|.....|..|+++ |++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~-Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQ-HGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHH-HTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhh-hCCC
Confidence            4455666666666666666666666654 5543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.32  E-value=5.3e-07  Score=38.88  Aligned_cols=26  Identities=35%  Similarity=0.824  Sum_probs=13.7

Q ss_pred             ceeCc--cchhhccChHHHHHHHhccccC
Q psy12639         13 PYACT--ECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        13 ~~~C~--~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ||.|.  .|++.|.....|..|+++ |++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~-H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT-HTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT-TSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH-hcC
Confidence            45554  455555555555555544 444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=7.2e-08  Score=41.03  Aligned_cols=26  Identities=31%  Similarity=0.631  Sum_probs=15.8

Q ss_pred             ceeCccchhhccChHHHHHHHhccccC
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ||.|..|++.|....+|..|++. |++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~-H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQ-HTG   27 (29)
Confidence            56666666666666666666654 544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=8.1e-08  Score=41.11  Aligned_cols=27  Identities=33%  Similarity=0.819  Sum_probs=16.8

Q ss_pred             CceeCccchhhccChHHHHHHHhccccC
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      +||.|..|++.|.....|..|++. |.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~-h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRI-HTG   28 (30)
Confidence            456666666666666666666654 544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=3.9e-07  Score=38.88  Aligned_cols=26  Identities=35%  Similarity=0.720  Sum_probs=15.2

Q ss_pred             ceeCccchhhccChHHHHHH-HhccccC
Q psy12639         13 PYACTECDQKFNRNSKLKIH-YNLAHCT   39 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h-~~~~h~~   39 (134)
                      ||.|..|++.|.....|..| ++. |++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~-H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKI-HSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTT-SCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHH-ccC
Confidence            55666666666666666666 333 544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.27  E-value=6.8e-07  Score=37.09  Aligned_cols=22  Identities=32%  Similarity=0.708  Sum_probs=11.7

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |.|..|++.|.....|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~   23 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRV   23 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHHH
Confidence            4555555555555555555543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.26  E-value=4.6e-07  Score=38.25  Aligned_cols=25  Identities=24%  Similarity=0.374  Sum_probs=17.8

Q ss_pred             CcccC--ccchhhcCHHHHHHHHHhhc
Q psy12639         70 PYACN--LCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        70 ~~~C~--~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56677  77777777777777777664

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=38.81  Aligned_cols=24  Identities=38%  Similarity=0.856  Sum_probs=15.9

Q ss_pred             CceeCccchhhccChHHHHHHHhc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      +||.|+.|++.|.....|..|++.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            356677777777776666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.18  E-value=3.1e-06  Score=43.29  Aligned_cols=45  Identities=16%  Similarity=0.272  Sum_probs=21.3

Q ss_pred             chhhccChHHHHHHHhccccCCC------ceecC--CCCCccCChhhHHhHHh
Q psy12639         19 CDQKFNRNSKLKIHYNLAHCTGE------MYECC--HCARSFPCKSYLIPHLR   63 (134)
Q Consensus        19 C~~~f~~~~~l~~h~~~~h~~~~------~~~C~--~C~~~~~~~~~l~~h~~   63 (134)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|..|++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            55555555555555533354433      34443  34444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.03  E-value=2.7e-06  Score=35.71  Aligned_cols=23  Identities=35%  Similarity=0.798  Sum_probs=13.9

Q ss_pred             ceeCc--cchhhccChHHHHHHHhc
Q psy12639         13 PYACT--ECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~--~C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|.  .|++.|.....|..|+++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHH
Confidence            45566  666666666666666554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.99  E-value=1.9e-05  Score=40.29  Aligned_cols=50  Identities=28%  Similarity=0.362  Sum_probs=42.5

Q ss_pred             cCCCCCccCChhhHHhHHh-hhcCCC------CcccC--ccchhhcCHHHHHHHHHhhc
Q psy12639         45 CCHCARSFPCKSYLIPHLR-VHTGEK------PYACN--LCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        45 C~~C~~~~~~~~~l~~h~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +..|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3459999999999999985 687665      79997  69999999999999998754

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.36  E-value=3.4e-05  Score=44.39  Aligned_cols=30  Identities=20%  Similarity=0.337  Sum_probs=23.7

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHh
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      ..++|+++|.|..|++.|.+.+.|..|++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            346777888888888888888888888753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.32  E-value=4.4e-05  Score=43.91  Aligned_cols=25  Identities=36%  Similarity=0.636  Sum_probs=12.6

Q ss_pred             CCCceecCCCCCccCChhhHHhHHh
Q psy12639         39 TGEMYECCHCARSFPCKSYLIPHLR   63 (134)
Q Consensus        39 ~~~~~~C~~C~~~~~~~~~l~~h~~   63 (134)
                      |.++|.|..|++.|.....|..|++
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCcceEcccCcchhCCHHHHHHHHh
Confidence            3344555555555555555555544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.07  E-value=0.0014  Score=37.95  Aligned_cols=77  Identities=16%  Similarity=0.285  Sum_probs=49.8

Q ss_pred             CCceeCccchhhccChHHHHHHHhcc-ccCC-CceecCC------CCCccCChhhHHhHHhhhcCCCCcccCccchhhcC
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLA-HCTG-EMYECCH------CARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLR   82 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~-h~~~-~~~~C~~------C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~   82 (134)
                      .+++.|..|...|.+...+..|.... |... +.+.+..      -+..+....    +...+.+...|.|..|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            36789999999999999999998421 3221 1222210      011221111    1223456677999999999999


Q ss_pred             HHHHHHHHH
Q psy12639         83 SYELVLHLK   91 (134)
Q Consensus        83 ~~~l~~H~~   91 (134)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999974

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.05  E-value=0.0006  Score=39.56  Aligned_cols=28  Identities=14%  Similarity=0.137  Sum_probs=22.8

Q ss_pred             ccCCCceecCCCCCccCChhhHHhHHhh
Q psy12639         37 HCTGEMYECCHCARSFPCKSYLIPHLRV   64 (134)
Q Consensus        37 h~~~~~~~C~~C~~~~~~~~~l~~h~~~   64 (134)
                      ..+...|.|..|..+|.+...+..|...
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence            4456678899999999999999888753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.64  E-value=0.0022  Score=30.09  Aligned_cols=26  Identities=19%  Similarity=0.367  Sum_probs=17.7

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      -.|.|+.|+..|.....|+.|++-.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CceeCCcccccccchHHHHhhhhhcC
Confidence            34667777777777777777777443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.20  E-value=0.0025  Score=29.89  Aligned_cols=23  Identities=22%  Similarity=0.492  Sum_probs=19.6

Q ss_pred             CceeCccchhhccChHHHHHHHh
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~   34 (134)
                      ..+.|+.|+..|+....|..||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56789999999998888998886

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.79  E-value=0.014  Score=35.28  Aligned_cols=20  Identities=15%  Similarity=0.657  Sum_probs=9.3

Q ss_pred             cccCccchhhcCHHHHHHHHH
Q psy12639         71 YACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      ..|+.|+..+ ....|..|..
T Consensus       111 v~C~~C~~~~-~r~~l~~H~~  130 (170)
T 3hcs_A          111 MDCPQCQRPF-QKFHINIHIL  130 (170)
T ss_dssp             EECTTTCCEE-EGGGHHHHHH
T ss_pred             eECCCCChHH-HHHHHHHHhh
Confidence            4455555444 3334455554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.29  E-value=0.013  Score=25.67  Aligned_cols=26  Identities=23%  Similarity=0.602  Sum_probs=19.6

Q ss_pred             eeCccchhhccChHHHHHHHhccccC
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      |.|+.|-+.|.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            77888888888888888887765543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.02  E-value=0.025  Score=24.71  Aligned_cols=24  Identities=25%  Similarity=0.479  Sum_probs=13.5

Q ss_pred             cccCccchhhcCHHHHHHHHHhhc
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |.||.|.+.|.+...|..|-...|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            555566666666666555554433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.80  E-value=0.027  Score=34.04  Aligned_cols=83  Identities=20%  Similarity=0.394  Sum_probs=58.4

Q ss_pred             CceeCc--cchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHH
Q psy12639         12 KPYACT--ECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLH   89 (134)
Q Consensus        12 ~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H   89 (134)
                      -...|+  -|+..+. ...+..|..  .-...+..|+.|+..+ ....|..|....-..+...|+.|+..+.. ..+..|
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H  155 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIH  155 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhH
Confidence            345673  4765554 456788873  4455678899999887 56678999876667778899999987755 577999


Q ss_pred             HHhhcCCCCC
Q psy12639         90 LKKCHREDAR   99 (134)
Q Consensus        90 ~~~~~~~~~~   99 (134)
                      ...+.++.++
T Consensus       156 ~~~~~~~~~~  165 (170)
T 3hcs_A          156 DQNCPLALEH  165 (170)
T ss_dssp             HTTCCC----
T ss_pred             HHhCcChhhh
Confidence            9888876543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.58  E-value=0.14  Score=22.47  Aligned_cols=23  Identities=26%  Similarity=0.431  Sum_probs=16.5

Q ss_pred             CceeCccchhhccChHHHHHHHh
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~   34 (134)
                      ..+.|..|+.+|....++..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            45677777777777777777765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.40  E-value=0.089  Score=27.56  Aligned_cols=38  Identities=16%  Similarity=0.336  Sum_probs=18.7

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhc
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYL   81 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   81 (134)
                      |.|..|+.++.. ..+..|...-.+...|.|..|++.|.
T Consensus        11 F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeC
Confidence            555555544432 23555544433333455555555555

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.14  E-value=0.14  Score=21.72  Aligned_cols=24  Identities=29%  Similarity=0.498  Sum_probs=20.4

Q ss_pred             eeCccchhhccChHHHHHHHhccc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAH   37 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h   37 (134)
                      --|..|.+.++...+|..|++..|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            358999999999999999998655

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=88.88  E-value=0.16  Score=24.42  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=16.2

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      -.|..|+..|....+++.|+.+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4677888888777777777753

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=88.44  E-value=0.21  Score=23.35  Aligned_cols=10  Identities=30%  Similarity=1.138  Sum_probs=4.9

Q ss_pred             eeCccchhhc
Q psy12639         14 YACTECDQKF   23 (134)
Q Consensus        14 ~~C~~C~~~f   23 (134)
                      |.|..||..+
T Consensus         5 y~C~vCGyvy   14 (46)
T 6rxn_A            5 YVCNVCGYEY   14 (46)
T ss_dssp             EEETTTCCEE
T ss_pred             EECCCCCeEE
Confidence            4555555444

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=88.35  E-value=0.26  Score=27.30  Aligned_cols=28  Identities=21%  Similarity=0.482  Sum_probs=18.4

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchh
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVR   79 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~   79 (134)
                      .|+.|..||..|.           ....+|-.||.|+..
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe   93 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCC
Confidence            4678888888871           123456778888643

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.92  E-value=0.39  Score=19.89  Aligned_cols=21  Identities=24%  Similarity=0.599  Sum_probs=15.1

Q ss_pred             eeCccchhhccChHHHHHHHh
Q psy12639         14 YACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~   34 (134)
                      +.|++|.........|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            567777777777777777754

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.52  E-value=0.48  Score=24.80  Aligned_cols=49  Identities=18%  Similarity=0.432  Sum_probs=35.2

Q ss_pred             CCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhH
Q psy12639         10 GAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPH   61 (134)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h   61 (134)
                      ..-.|.|..||-++.-. .+..|... -.+-..|.|..|+..|... ....|
T Consensus         7 ~MV~F~C~~Cgd~lKK~-kv~~H~~~-Cr~~~~~SCIDC~~~F~~~-~y~~H   55 (79)
T 1wjv_A            7 GMVFFTCNACGESVKKI-QVEKHVSN-CRNCECLSCIDCGKDFWGD-DYKSH   55 (79)
T ss_dssp             CCCEEEESSSCCEEETT-HHHHHHHH-CTTCCEEEETTTTEEEEGG-GTTTC
T ss_pred             ceeEEEcCCCCCeeecc-cchhHHhh-CCCCCcEEecccCCeeCCC-CEeCE
Confidence            34569999999877654 48888753 4454579999999999753 34444

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=87.29  E-value=0.24  Score=30.94  Aligned_cols=25  Identities=24%  Similarity=0.483  Sum_probs=18.8

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcCCCCcccCccch
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTV   78 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   78 (134)
                      ..|.|..||..+.             |..|+.||.|+-
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            4689999998764             245789999974

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=86.28  E-value=0.46  Score=24.41  Aligned_cols=11  Identities=27%  Similarity=0.763  Sum_probs=4.9

Q ss_pred             ceecCCCCCcc
Q psy12639         42 MYECCHCARSF   52 (134)
Q Consensus        42 ~~~C~~C~~~~   52 (134)
                      +-.|..|+..+
T Consensus        44 ~v~C~~C~~~~   54 (76)
T 2yuc_A           44 RLKCEFCGCDF   54 (76)
T ss_dssp             CCCCSSSCCCC
T ss_pred             ceECCCCCCcc
Confidence            33444444443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.47  E-value=0.45  Score=25.45  Aligned_cols=25  Identities=36%  Similarity=0.668  Sum_probs=13.1

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcCCCC
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTGEKP   70 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~   70 (134)
                      ..|..||+.|..   |..|+..++|..|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             eEecccchhhHH---HHHHHHHccCCCH
Confidence            455555555542   4455555445444

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=84.51  E-value=0.22  Score=26.13  Aligned_cols=20  Identities=15%  Similarity=0.286  Sum_probs=12.7

Q ss_pred             ceeCccchhhccChHHHHHHH
Q psy12639         13 PYACTECDQKFNRNSKLKIHY   33 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~   33 (134)
                      ...|+.||..... ..|...|
T Consensus         8 ~~~~PlCG~~L~W-~eLIeQM   27 (95)
T 2k5c_A            8 MAKCPICGSPLKW-EELIEEM   27 (95)
T ss_dssp             CEECSSSCCEECH-HHHHHHS
T ss_pred             cccCCcCCCccCH-HHHHHHH
Confidence            4678888876654 3455444

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=84.01  E-value=0.78  Score=25.21  Aligned_cols=43  Identities=21%  Similarity=0.573  Sum_probs=28.0

Q ss_pred             eeCccchhhccChHHHHHHHhccccCCCceecC---CCCCccCChhhHHhHHhh
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAHCTGEMYECC---HCARSFPCKSYLIPHLRV   64 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~---~C~~~~~~~~~l~~h~~~   64 (134)
                      -.|+.|...+.....        +..+.-|.|.   .|.++|.+...|+.|...
T Consensus        38 k~Cp~C~~~V~rVe~--------~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~   83 (101)
T 3vk6_A           38 KMCPGCSDPVQRIEQ--------CTRGSLFMCSIVQGCKRTYLSQRDLQAHINH   83 (101)
T ss_dssp             CBCTTTCCBCSEEEE--------EEGGGCCCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred             CCCcCcCCeeeeeEE--------eccCCEEECCCCCCHHHHhcCHHHHHHHHHH
Confidence            357777766544332        2234467776   488888888888888764

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=83.35  E-value=0.8  Score=28.66  Aligned_cols=27  Identities=22%  Similarity=0.326  Sum_probs=23.3

Q ss_pred             CCCcccCccchhhcC-HHHHHHHHHhhc
Q psy12639         68 EKPYACNLCTVRYLR-SYELVLHLKKCH   94 (134)
Q Consensus        68 ~~~~~C~~C~~~f~~-~~~l~~H~~~~~   94 (134)
                      ..+..|..|+..|.+ -..|+.|+..+.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence            457899999999987 999999998764

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=82.70  E-value=0.6  Score=28.32  Aligned_cols=24  Identities=29%  Similarity=0.701  Sum_probs=16.9

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcCCCCcccCccc
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCT   77 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   77 (134)
                      ..|.|+.||..+.             ++-|-.||.|+
T Consensus       137 ~~~~C~~CG~i~~-------------~~~p~~CP~Cg  160 (170)
T 3pwf_A          137 KVYICPICGYTAV-------------DEAPEYCPVCG  160 (170)
T ss_dssp             CEEECTTTCCEEE-------------SCCCSBCTTTC
T ss_pred             CeeEeCCCCCeeC-------------CCCCCCCCCCC
Confidence            3578888887763             24556888887

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.36  E-value=0.47  Score=24.72  Aligned_cols=27  Identities=37%  Similarity=0.524  Sum_probs=19.1

Q ss_pred             CcccCccchhhc-------CHHHHHHHHHhhcCC
Q psy12639         70 PYACNLCTVRYL-------RSYELVLHLKKCHRE   96 (134)
Q Consensus        70 ~~~C~~C~~~f~-------~~~~l~~H~~~~~~~   96 (134)
                      .-.|..|++.+.       .-+.|.+|++.+|.+
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            456777777766       346889999887753

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.52  E-value=1.3  Score=25.32  Aligned_cols=27  Identities=26%  Similarity=0.465  Sum_probs=19.2

Q ss_pred             CCceeCccchhhccChHHHHHHHhccc
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAH   37 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h   37 (134)
                      ..+..|-.|...|.+...+..|++..|
T Consensus        13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H   39 (121)
T 1wir_A           13 RQHTPCLFCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSS
T ss_pred             CCceeEecCCCcccCHHHHHHHHHHhc
Confidence            356777777777777777777777644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	134
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	7e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.004
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.004

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 3e-08
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 43 YECCHCARSFPCKSYLIPHLR-VHTGEKPYACNL 75
          Y C  C + F    +L  H++ VHT E+P+ C +
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 4e-07
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 43 YECCH--CARSFPCKSYLIPHLRVHTGEKPYAC 73
          + C    C +SF  K +L  H+++H+  + Y C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 4e-07
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 12 KPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVH 65
          K Y C +C + F   S+   H +  H     Y C  C + F  K +L+ H+++H
Sbjct: 2  KLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 6e-04
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 46 CHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
          C C +SF  KS    H+ +H G +PY C +C  ++   + LV H+K
Sbjct: 6  CQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 9e-07
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
          R H+GEKPY C +C  R+ +S  + +H+ + H E+
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 2e-06
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEM 42
          H+G KPY C  C  +F ++  +K+H    H T  +
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKH-TENV 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (72), Expect = 0.003
 Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 2/32 (6%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPH-LRVHTGE 68
          +GE  YEC  C   F     +  H L+ HT  
Sbjct: 4  SGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 40.3 bits (95), Expect = 1e-06
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEK 69
          + C  C R+F  + +L  H R HT EK
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (94), Expect = 2e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGE 68
          +GE  Y C  C ++F   S L+ H RVHTGE
Sbjct: 3  SGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 4e-06
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIH 32
          H+G KPY C EC + F+R+S L  H
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQH 26

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 64 VHTGEKPYACNLCTVRYLRSYELVLHLK 91
          +H+GEKPY C  C   + RS  LV H +
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQR 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 3e-06
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHTGEK 69
          + C  C + F    +L  H++ H  +K
Sbjct: 3  FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 12 KPYACTECDQKFNRNSKLKIH 32
          K +AC EC ++F R+  L  H
Sbjct: 1  KKFACPECPKRFMRSDHLSKH 21

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 7e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRED 97
          R HTGEKPYAC+ C   + +   L +H K+ H  +
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 2e-05
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIH 32
          HTG KPYAC+ CD+ F +   L +H
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMH 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 8e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGEK 69
          TGE  Y C HC ++F  K  L  H + +    
Sbjct: 4  TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKK 92
            R  TG KP+ C  C   + RS  L LH K+
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 5e-05
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIH 32
               TG KP+ C +CD+ F+R+  L +H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALH 30

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.2 bits (71), Expect = 0.003
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTG 67
          TG   ++C  C RSF    +L  H + H  
Sbjct: 7  TGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 3e-05
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 4  HLMLHTGAKPYACTECDQKFNRNSKLKIH 32
                  + Y C EC + F+ +S L  H
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKH 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 4e-05
 Identities = 6/31 (19%), Positives = 11/31 (35%)

Query: 61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLK 91
                  + Y C+ C   +  S +L  H +
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 7e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 39 TGEM-YECCHCARSFPCKSYLIPHLRVHTGE 68
               Y+C  C +SF   S L  H R HTGE
Sbjct: 8  RERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (85), Expect = 4e-05
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHTG 67
          ++C  C R+F    +L  H+R HTG
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.002
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 12 KPYACTECDQKFNRNSKLKIH 32
          KP+ C  C + F+R+  L  H
Sbjct: 2  KPFQCRICMRNFSRSDHLTTH 22

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 7e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 43 YECCH--CARSFPCKSYLIPHLRVHTGEK 69
          + C    C + F     L  H R HTGEK
Sbjct: 3  FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 3e-04
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 43 YECCHCARSFPCKSYLIPHLRVHT 66
          Y+C  C ++F   S LI H R+HT
Sbjct: 3  YKCLECGKAFSQNSGLINHQRIHT 26

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 43 YECCH--CARSFPCKSYLIPHLRVHTGE 68
          ++C    C +S+     L  HLR HTGE
Sbjct: 3  HKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (77), Expect = 4e-04
 Identities = 4/34 (11%), Positives = 13/34 (38%), Gaps = 3/34 (8%)

Query: 39 TGE---MYECCHCARSFPCKSYLIPHLRVHTGEK 69
            +         C ++F  +  +  H++ H  ++
Sbjct: 14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 6e-04
 Identities = 6/25 (24%), Positives = 10/25 (40%)

Query: 8  HTGAKPYACTECDQKFNRNSKLKIH 32
           +G +P+ C  C   F   +    H
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARH 26

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 39 TGE-MYECCHCARSFPCKSYLIPHLRVHTGE 68
          +G+  + C  C  +F  K+    HL+VHT  
Sbjct: 3  SGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 30.9 bits (70), Expect = 0.004
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 65 HTGEKPYACNLCTVRYLRSYELVLHLK 91
           +G++P+ C +C   +        HLK
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLK 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.5 bits (72), Expect = 0.002
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 43 YEC--CHCARSFPCKSYLIPHLRVHTG 67
          Y C    C R F   + L  H+R+HTG
Sbjct: 3  YACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.8 bits (70), Expect = 0.004
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 43 YEC--CHCARSFPCKSYLIPHLRVHTGE 68
          ++C    C + F     L  H+R+HTG+
Sbjct: 3  FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	134
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.75
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.46
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.44
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.43
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.42
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.41
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.36
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.35
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.32
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.32
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.28
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.26
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.18
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.13
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.11
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.1
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.07
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.06
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.05
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.96
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.85
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.84
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.75
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.7
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.65
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.5
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.19
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.15
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.13
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.95
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.95
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.94
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.91
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.85
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.84
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.83
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.81
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.78
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.76
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.75
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.67
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.67
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.6
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.57
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.49
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.46
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.45
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.45
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.44
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.32
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.23
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.22
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.19
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.17
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.11
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.05
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.94
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.89
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.88
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.86
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	96.72
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.71
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.68
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.65
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.65
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.43
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.4
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.18
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	96.18
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.05
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.92
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.91
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.59
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.5
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.44
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.33
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.18
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.11
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.08
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.8
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.61
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.5
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.47
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.33
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.28
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.69
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.36
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.87
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.73
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	92.48
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	90.88
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.04
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.51
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	86.53
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	83.9
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.94
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.31
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	81.66
d1fu9a_	36	U-shaped transcription factor, different fingers {	80.64
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	80.54

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.4e-19  Score=87.22  Aligned_cols=52  Identities=35%  Similarity=0.728  Sum_probs=30.1

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcCCCCcccCccchhhcCHHHHHHHHHhh
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      +||.|. ||+.|.....|..|++.|.+++||.|..||+.|...+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            455553 5555555555555555555555555555555555555555555543

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2e-18  Score=85.13  Aligned_cols=53  Identities=30%  Similarity=0.703  Sum_probs=50.5

Q ss_pred             CCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCccCChhhHHhHHhhh
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      |+||.| .||++|....+|..|+++ |++++||.|..|++.|...+.|..|++.|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~-Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHH-HSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhc-cccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 599999999999999987 99999999999999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=4.9e-15  Score=67.20  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=28.1

Q ss_pred             hHHhhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         60 PHLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        60 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      .|++.|.+++||.|+.||+.|...++|..|+++|++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3566777778888888888888888888887777765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.6e-14  Score=63.88  Aligned_cols=36  Identities=31%  Similarity=0.667  Sum_probs=22.3

Q ss_pred             CCceeCccchhhccChHHHHHHHhccccCCCceecC
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECC   46 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~   46 (134)
                      ++||.|..||++|....+|..|++..|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            456666666666666666666654336666666664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.8e-14  Score=65.32  Aligned_cols=37  Identities=24%  Similarity=0.471  Sum_probs=28.4

Q ss_pred             hHhhhccCCCceeCccchhhccChHHHHHHHhccccCC
Q psy12639          3 SHLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCTG   40 (134)
Q Consensus         3 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~   40 (134)
                      +|+++|.+++||.|..||++|...++|..|+++ |+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~-HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc-CCCC
Confidence            567778888888888888888888888888776 7764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.5e-14  Score=61.26  Aligned_cols=32  Identities=44%  Similarity=0.718  Sum_probs=24.5

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |++++||.|..|++.|...++|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            67777777777777777777777777777765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=6.9e-14  Score=62.48  Aligned_cols=34  Identities=44%  Similarity=0.852  Sum_probs=27.6

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ++|+|++||.|..|+++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4678888888888888888888888888888765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.2e-13  Score=61.58  Aligned_cols=34  Identities=29%  Similarity=0.474  Sum_probs=17.7

Q ss_pred             CCCcccCccchhhcCHHHHHHHHH-hhcCCCCCCC
Q psy12639         68 EKPYACNLCTVRYLRSYELVLHLK-KCHREDARNP  101 (134)
Q Consensus        68 ~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~~  101 (134)
                      ++||.|..||+.|...++|..|++ +|++++||.|
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            345555555555555555555543 3555555554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=9.7e-14  Score=62.42  Aligned_cols=34  Identities=38%  Similarity=0.593  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         61 HLRVHTGEKPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        61 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |.+.|++++||.|+.|++.|.+.++|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4567788888888888888888888888877764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.6e-13  Score=59.10  Aligned_cols=32  Identities=44%  Similarity=0.922  Sum_probs=20.6

Q ss_pred             hccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          7 LHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         7 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      +|.|++||.|..|+++|...++|..|+++ |++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~-Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV-HTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG-GGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc-cCC
Confidence            35666666666666666666666666665 655

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.6e-13  Score=60.02  Aligned_cols=34  Identities=41%  Similarity=0.901  Sum_probs=27.0

Q ss_pred             hhhcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         63 RVHTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        63 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ++|+|++||.|+.|++.|...++|..|++.+|.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4578888888888888888888888887766654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=4.5e-13  Score=59.09  Aligned_cols=32  Identities=22%  Similarity=0.585  Sum_probs=25.2

Q ss_pred             hcCCCCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |+|++||.|.+|++.|.+.++|..|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56788888888888888888888888887654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=3.2e-13  Score=60.70  Aligned_cols=34  Identities=35%  Similarity=0.757  Sum_probs=24.0

Q ss_pred             HhhhccCCCceeCccchhhccChHHHHHHHhcccc
Q psy12639          4 HLMLHTGAKPYACTECDQKFNRNSKLKIHYNLAHC   38 (134)
Q Consensus         4 h~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~   38 (134)
                      |.++|+|++||.|.+|+++|...++|..|+++ |.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~-H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhc-Cc
Confidence            45667777777777777777777777777765 54

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=9.7e-13  Score=58.66  Aligned_cols=33  Identities=39%  Similarity=0.860  Sum_probs=22.2

Q ss_pred             hhccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ++|+|++||.|.+|+++|...++|..|+++ |.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~-H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHH-TTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcc-cCC
Confidence            356677777777777777777777777765 544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.28  E-value=1.2e-12  Score=55.39  Aligned_cols=29  Identities=24%  Similarity=0.599  Sum_probs=22.6

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +||.|++|++.|.+.+.|..|+++|++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57788888888888888888888887764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1.1e-12  Score=54.83  Aligned_cols=28  Identities=29%  Similarity=0.719  Sum_probs=21.9

Q ss_pred             CCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         68 EKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        68 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      ++||.|+.|++.|.+.++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5778888888888888888888887764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.5e-12  Score=58.00  Aligned_cols=33  Identities=33%  Similarity=0.765  Sum_probs=23.5

Q ss_pred             hhccCCCceeCccchhhccChHHHHHHHhcccc
Q psy12639          6 MLHTGAKPYACTECDQKFNRNSKLKIHYNLAHC   38 (134)
Q Consensus         6 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~   38 (134)
                      ++|.|++||.|+.|++.|....+|..|++..|.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            467777777777777777777777777654343

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.9e-12  Score=54.66  Aligned_cols=29  Identities=34%  Similarity=0.687  Sum_probs=21.3

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +||.|++|++.|.+.++|..|+++|++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777663

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=5.9e-12  Score=55.40  Aligned_cols=31  Identities=23%  Similarity=0.631  Sum_probs=18.4

Q ss_pred             ccCCCceeCccchhhccChHHHHHHHhccccC
Q psy12639          8 HTGAKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus         8 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      |.|++||.|.+|++.|....+|..|+++ |+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~-Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc-cCC
Confidence            3556666666666666666666666654 544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.8e-12  Score=51.60  Aligned_cols=26  Identities=27%  Similarity=0.542  Sum_probs=20.9

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888774

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=7.5e-12  Score=52.25  Aligned_cols=28  Identities=32%  Similarity=0.734  Sum_probs=17.1

Q ss_pred             CCceeCccchhhccChHHHHHHHhccccC
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      |+||.|..|+++|...++|..|+++ |+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~-HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT-HTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH-HHC
T ss_pred             CcCccCCCCcCEecccccccccCCC-ccC
Confidence            4566666666666666666666664 543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=1.2e-12  Score=61.71  Aligned_cols=32  Identities=22%  Similarity=0.595  Sum_probs=18.8

Q ss_pred             hcCCCCcccCc--cchhhcCHHHHHHHHHhhcCC
Q psy12639         65 HTGEKPYACNL--CTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        65 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.+++||.|++  |++.|...++|..|+++|++|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            55556666644  666666666666666665554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.13  E-value=1.4e-11  Score=51.95  Aligned_cols=28  Identities=32%  Similarity=0.777  Sum_probs=15.6

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCC
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTG   40 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~   40 (134)
                      +||.|++|+++|...+.|..|+++ |+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~-HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRS-HTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCc-ccCC
Confidence            355555555555555555555554 5554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.1e-11  Score=51.33  Aligned_cols=28  Identities=36%  Similarity=0.733  Sum_probs=15.0

Q ss_pred             CceeCccchhhccChHHHHHHHhccccCC
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHCTG   40 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~~~   40 (134)
                      +||.|++|+++|...+.|..|+++ |+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~-Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKT-HQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHG-GGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCc-cCCc
Confidence            355555555555555555555554 5544

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=6.7e-12  Score=59.11  Aligned_cols=39  Identities=15%  Similarity=0.471  Sum_probs=23.8

Q ss_pred             HHHHHhccccCCCceecCC--CCCccCChhhHHhHHhhhcCCC
Q psy12639         29 LKIHYNLAHCTGEMYECCH--CARSFPCKSYLIPHLRVHTGEK   69 (134)
Q Consensus        29 l~~h~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~   69 (134)
                      +..|+ . |++++||.|.+  |++.|...+.|..|+++|+|++
T Consensus         7 l~~h~-~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-K-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-E-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-h-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44444 2 66666666655  6666666666666666666653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.4e-11  Score=50.65  Aligned_cols=28  Identities=36%  Similarity=0.630  Sum_probs=22.1

Q ss_pred             CCcccCc--cchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|++  |++.|.+.++|..|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5778877  888888888888888888765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.9e-11  Score=52.79  Aligned_cols=26  Identities=15%  Similarity=0.066  Sum_probs=13.0

Q ss_pred             cchhhcCHHHHHHHHHhhcCCCCCCC
Q psy12639         76 CTVRYLRSYELVLHLKKCHREDARNP  101 (134)
Q Consensus        76 C~~~f~~~~~l~~H~~~~~~~~~~~~  101 (134)
                      |++.|.+...|..|+++|++++||.|
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeC
Confidence            55555555555555555555554444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=7.2e-11  Score=52.25  Aligned_cols=32  Identities=31%  Similarity=0.843  Sum_probs=19.9

Q ss_pred             eecCC--CCCccCChhhHHhHHhhhcCCCCcccC
Q psy12639         43 YECCH--CARSFPCKSYLIPHLRVHTGEKPYACN   74 (134)
Q Consensus        43 ~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~   74 (134)
                      |.|+.  |++.|.....|..|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  666666666666666666666666664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.6e-11  Score=50.40  Aligned_cols=28  Identities=25%  Similarity=0.710  Sum_probs=21.3

Q ss_pred             CCcccCc--cchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +||.|++  |++.|.+.++|..|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5777765  888888888888888877765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1e-10  Score=47.55  Aligned_cols=24  Identities=46%  Similarity=0.909  Sum_probs=13.1

Q ss_pred             CceeCccchhhccChHHHHHHHhc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |||+|.+||++|...+.|..|+++
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            355555555555555555555554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.1e-10  Score=48.99  Aligned_cols=29  Identities=34%  Similarity=0.691  Sum_probs=21.2

Q ss_pred             CCcccC--ccchhhcCHHHHHHHHHhhcCCC
Q psy12639         69 KPYACN--LCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        69 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +||.|+  .|++.|.+.++|..|+++|++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            467774  47788888888888877777763

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=8.6e-10  Score=47.26  Aligned_cols=29  Identities=28%  Similarity=0.799  Sum_probs=22.6

Q ss_pred             CCCcccCc--cchhhcCHHHHHHHHHhhcCC
Q psy12639         68 EKPYACNL--CTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        68 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ++||.|++  |++.|++..+|..|+++|..+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            47788866  888888888888888887653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.2e-10  Score=46.81  Aligned_cols=26  Identities=35%  Similarity=0.664  Sum_probs=13.8

Q ss_pred             ceeCcc--chhhccChHHHHHHHhccccC
Q psy12639         13 PYACTE--CDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ||.|++  |+++|...+.|..|+++ |+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~-HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRS-HTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHH-TTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCc-CcC
Confidence            455555  55555555555555554 544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=6.2e-10  Score=46.61  Aligned_cols=27  Identities=37%  Similarity=0.816  Sum_probs=20.5

Q ss_pred             CCcccCc--cchhhcCHHHHHHHHHhhcC
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~   95 (134)
                      +||.|++  |++.|.+.++|..|+++|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5777766  88888888888888877764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.1e-09  Score=45.39  Aligned_cols=26  Identities=31%  Similarity=0.805  Sum_probs=13.3

Q ss_pred             ceeCcc--chhhccChHHHHHHHhccccC
Q psy12639         13 PYACTE--CDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ||.|++  |+++|.....|..|+++ |+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~-HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRI-HTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHH-HHC
T ss_pred             CccCCCCCCCceECcHHHcCccccc-cCC
Confidence            455544  55555555555555554 444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=9.8e-10  Score=45.50  Aligned_cols=26  Identities=27%  Similarity=0.709  Sum_probs=18.1

Q ss_pred             CCcccCc--cchhhcCHHHHHHHHHhhc
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~~~~~   94 (134)
                      +||.|++  |++.|++..+|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677765  7777777777777777663

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=7e-09  Score=44.11  Aligned_cols=27  Identities=33%  Similarity=0.764  Sum_probs=13.5

Q ss_pred             ceeCcc--chhhccChHHHHHHHhccccCC
Q psy12639         13 PYACTE--CDQKFNRNSKLKIHYNLAHCTG   40 (134)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~h~~~~h~~~   40 (134)
                      ||.|++  |+++|....+|..|+++ |+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~-Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRT-HTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT-TSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCc-cccc
Confidence            455532  55555555555555544 5443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.65  E-value=9.9e-09  Score=43.87  Aligned_cols=28  Identities=39%  Similarity=0.801  Sum_probs=17.6

Q ss_pred             CCceeCcc--chhhccChHHHHHHHhccccC
Q psy12639         11 AKPYACTE--CDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        11 ~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ++||.|.+  |+++|....+|..|+++ |+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~-Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKS-HQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGG-GTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhh-ccC
Confidence            45666666  66666666666666665 543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=1e-08  Score=40.96  Aligned_cols=27  Identities=41%  Similarity=0.711  Sum_probs=23.7

Q ss_pred             CCCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         68 EKPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        68 ~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      ++||.|..||+.|..+....+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578999999999999999999988874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=7.5e-09  Score=43.22  Aligned_cols=24  Identities=42%  Similarity=1.052  Sum_probs=12.9

Q ss_pred             CceeCcc--chhhccChHHHHHHHhc
Q psy12639         12 KPYACTE--CDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~h~~~   35 (134)
                      +||.|++  |+++|...++|..|+++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc
Confidence            3555554  55555555555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.6e-08  Score=38.11  Aligned_cols=25  Identities=40%  Similarity=0.781  Sum_probs=15.9

Q ss_pred             ceeCccchhhccChHHHHHHHhcccc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAHC   38 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h~   38 (134)
                      |+.|+.|++.|+.+..|..|++. |+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~-ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRC-HT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-CC
T ss_pred             CCccchhhhHhcchhHHHHHhhc-cC
Confidence            34566666666666666666665 54

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4.1e-08  Score=39.75  Aligned_cols=28  Identities=32%  Similarity=0.781  Sum_probs=21.4

Q ss_pred             CCceeCccchhhccChHHHHHHHhccccC
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ++||.|++|+..|..+..+..|.++ |.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs-hdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS-HDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH-HSC
T ss_pred             CCCcccchHHHHhhccccceEeeec-ccC
Confidence            4678888888888888888888876 654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=5.1e-08  Score=40.17  Aligned_cols=23  Identities=39%  Similarity=0.860  Sum_probs=11.3

Q ss_pred             ceeCcc--chhhccChHHHHHHHhc
Q psy12639         13 PYACTE--CDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|++  |+++|....+|..|+++
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhh
Confidence            444544  55555555555555443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.9e-07  Score=36.00  Aligned_cols=23  Identities=22%  Similarity=0.502  Sum_probs=11.5

Q ss_pred             ccCccchhhcCHHHHHHHHHhhc
Q psy12639         72 ACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        72 ~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      .|+.|++.|++...|..|++.|+
T Consensus         3 kc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             ccchhhhHhcchhHHHHHhhccC
Confidence            44555555555555555555443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.1e-07  Score=38.49  Aligned_cols=29  Identities=24%  Similarity=0.394  Sum_probs=17.0

Q ss_pred             cccCccchhhcCHHHHHHHHHhhcCCCCC
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCHREDAR   99 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   99 (134)
                      ..|..||+.|...-.|.+|...|.+|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34555666666666666666556655555

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.30  E-value=2.5e-07  Score=36.85  Aligned_cols=25  Identities=40%  Similarity=0.849  Sum_probs=16.9

Q ss_pred             CCceeCccchhhccChHHHHHHHhc
Q psy12639         11 AKPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        11 ~~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      ++||.|.+||+.|........|.+.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhh
Confidence            4667777777777777666666654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.7e-07  Score=36.30  Aligned_cols=26  Identities=23%  Similarity=0.321  Sum_probs=17.7

Q ss_pred             cccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      ..|.+||++|..++.|++|...|++|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35667777777777777777766654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.5e-07  Score=36.36  Aligned_cols=27  Identities=48%  Similarity=0.899  Sum_probs=21.1

Q ss_pred             CCcccCc--cchhhcCHHHHHHHHHhhcC
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~   95 (134)
                      +||.|..  |++.++..++|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777765  88888888888888887664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5.2e-07  Score=35.64  Aligned_cols=27  Identities=26%  Similarity=0.668  Sum_probs=12.9

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      +||+|..|...-..++.|..|++.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            344444444444444444444444443

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.1e-06  Score=34.91  Aligned_cols=26  Identities=23%  Similarity=0.484  Sum_probs=17.0

Q ss_pred             cccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      |.|+.||......+.|++|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            55666666666666666666666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.2e-06  Score=34.60  Aligned_cols=27  Identities=37%  Similarity=0.591  Sum_probs=16.2

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcC
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      +||.|..|...-..+++|..|.+.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666666666666666666554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.3e-06  Score=36.03  Aligned_cols=29  Identities=28%  Similarity=0.420  Sum_probs=14.8

Q ss_pred             eeCccchhhccChHHHHHHHhccccCCCce
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAHCTGEMY   43 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~   43 (134)
                      ..|..||+.|.....|..|.-+ |++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhkls-hs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLS-HSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGG-SCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcc-cCCCCCC
Confidence            3455555555555555555443 5555544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.5e-06  Score=35.04  Aligned_cols=28  Identities=32%  Similarity=0.609  Sum_probs=16.8

Q ss_pred             CceecCCCCCccCChhhHHhHHhhhcCC
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRVHTGE   68 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   68 (134)
                      +||.|++|+..|..+.-+..|.++|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            4566666666666666666666665543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.95  E-value=3.3e-06  Score=36.58  Aligned_cols=28  Identities=21%  Similarity=0.583  Sum_probs=17.4

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcCC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      +.|.|..|++.|.+..+|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3466666666666666666666665544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=4.4e-06  Score=32.75  Aligned_cols=25  Identities=40%  Similarity=0.643  Sum_probs=14.4

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcC
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      ..|..||+.|..++.|.+|+-.|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3455666666666666666555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=5.4e-06  Score=32.85  Aligned_cols=26  Identities=35%  Similarity=0.521  Sum_probs=17.9

Q ss_pred             eecCCCCCccCChhhHHhHHhhhcCC
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHTGE   68 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~~~   68 (134)
                      |.|+.|+..-..++-|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56777777777777777777777654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4.6e-06  Score=36.35  Aligned_cols=27  Identities=37%  Similarity=0.944  Sum_probs=20.4

Q ss_pred             CCCCcccCccchhhcCHHHHHHHHHhh
Q psy12639         67 GEKPYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        67 ~~~~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      |.+||+|..|++.|-++.++.+|...+
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhhh
Confidence            567888888888888888887776543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.4e-06  Score=36.12  Aligned_cols=24  Identities=33%  Similarity=0.810  Sum_probs=16.5

Q ss_pred             CCCceeCccchhhccChHHHHHHH
Q psy12639         10 GAKPYACTECDQKFNRNSKLKIHY   33 (134)
Q Consensus        10 ~~~~~~C~~C~~~f~~~~~l~~h~   33 (134)
                      |.+||.|..|++.|-...++..|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            556777777777777776666665

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=6.2e-06  Score=32.83  Aligned_cols=27  Identities=33%  Similarity=0.637  Sum_probs=15.0

Q ss_pred             CceeCccchhhccChHHHHHHHhcccc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNLAHC   38 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~~h~   38 (134)
                      +||.|..|.......++|..|+++.|.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            355555555555555555555555443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=7.1e-06  Score=32.06  Aligned_cols=26  Identities=35%  Similarity=0.572  Sum_probs=18.6

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +||.|..|..+-..+++|.+|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1.9e-06  Score=35.07  Aligned_cols=27  Identities=22%  Similarity=0.570  Sum_probs=20.8

Q ss_pred             CCcccCc--cchhhcCHHHHHHHH-HhhcC
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHL-KKCHR   95 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~-~~~~~   95 (134)
                      +||.|..  |.++|++.++..+|+ +.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5777866  888888888888887 66643

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.1e-05  Score=31.95  Aligned_cols=23  Identities=35%  Similarity=0.771  Sum_probs=18.1

Q ss_pred             ceeCccchhhccChHHHHHHHhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|..|..+|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67788888888888888888765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=1.6e-05  Score=30.68  Aligned_cols=24  Identities=50%  Similarity=0.837  Sum_probs=12.4

Q ss_pred             cCCCCCccCChhhHHhHHhhhcCC
Q psy12639         45 CCHCARSFPCKSYLIPHLRVHTGE   68 (134)
Q Consensus        45 C~~C~~~~~~~~~l~~h~~~h~~~   68 (134)
                      |+.|.+.|.++..|..|-+.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            455555555555555555555444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.75  E-value=1.4e-05  Score=34.50  Aligned_cols=24  Identities=38%  Similarity=0.766  Sum_probs=11.8

Q ss_pred             eecCCCCCccCChhhHHhHHhhhc
Q psy12639         43 YECCHCARSFPCKSYLIPHLRVHT   66 (134)
Q Consensus        43 ~~C~~C~~~~~~~~~l~~h~~~h~   66 (134)
                      |.|.+|++.|.+...|-.|++.|.
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTC
T ss_pred             cCCCCCCCccCCcccccchHhhhc
Confidence            445555555555555555544443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=2e-05  Score=30.38  Aligned_cols=26  Identities=31%  Similarity=0.643  Sum_probs=24.3

Q ss_pred             ccCccchhhcCHHHHHHHHHhhcCCC
Q psy12639         72 ACNLCTVRYLRSYELVLHLKKCHRED   97 (134)
Q Consensus        72 ~C~~C~~~f~~~~~l~~H~~~~~~~~   97 (134)
                      +|+.|.+.|.+.--|+.|-+.|++|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.9e-05  Score=31.39  Aligned_cols=26  Identities=38%  Similarity=0.685  Sum_probs=17.3

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      +||+|..|......+++|+.|++..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46677777766666777777766544

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.67  E-value=1.4e-05  Score=30.37  Aligned_cols=23  Identities=26%  Similarity=0.622  Sum_probs=17.0

Q ss_pred             cccCccchhhcCHHHHHHHHHhh
Q psy12639         71 YACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      |.|..|.+.|...+.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            46777777777777777777765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.60  E-value=2.7e-05  Score=30.69  Aligned_cols=25  Identities=32%  Similarity=0.530  Sum_probs=17.6

Q ss_pred             CCcccCc--cchhhcCHHHHHHHHHhh
Q psy12639         69 KPYACNL--CTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        69 ~~~~C~~--C~~~f~~~~~l~~H~~~~   93 (134)
                      .||.|+.  |++.|+..+-|++|-+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3667754  777777777777777665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=2.4e-05  Score=31.43  Aligned_cols=24  Identities=33%  Similarity=0.818  Sum_probs=13.4

Q ss_pred             CceeCcc--chhhccChHHHHHHHhc
Q psy12639         12 KPYACTE--CDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~h~~~   35 (134)
                      +||.|..  |++++...++|..|++.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHh
Confidence            3555555  55555555555555553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=7.3e-05  Score=29.47  Aligned_cols=21  Identities=33%  Similarity=0.765  Sum_probs=7.8

Q ss_pred             ccCccchhhcCHHHHHHHHHh
Q psy12639         72 ACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        72 ~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      .|..|...|..+-.|+-|+-.
T Consensus         6 tcs~cqe~f~rrmelr~hmvs   26 (30)
T d2dlqa3           6 TCSVCQETFRRRMELRLHMVS   26 (30)
T ss_dssp             ECSSSCCEESSHHHHHHHHHH
T ss_pred             EeHHHHHHHHHHHhheeeeec
Confidence            333333333333333333333

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=7e-05  Score=29.51  Aligned_cols=29  Identities=31%  Similarity=0.651  Sum_probs=26.0

Q ss_pred             CCceecCCCCCccCChhhHHhHHhhhcCC
Q psy12639         40 GEMYECCHCARSFPCKSYLIPHLRVHTGE   68 (134)
Q Consensus        40 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   68 (134)
                      +..|.|..|...|...-.|..|+.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34689999999999999999999999874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5e-05  Score=30.09  Aligned_cols=25  Identities=36%  Similarity=0.781  Sum_probs=12.4

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhc
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      ||+|..|...-.+.++|..|++..|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHHc
Confidence            4555555544455555555554433

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.45  E-value=4.2e-05  Score=31.01  Aligned_cols=22  Identities=36%  Similarity=0.772  Sum_probs=10.7

Q ss_pred             ceecCCCCCccCChhhHHhHHh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLR   63 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~   63 (134)
                      ||.|.+|++.|.....|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            3445555555555544444443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=7.2e-05  Score=28.31  Aligned_cols=22  Identities=55%  Similarity=0.794  Sum_probs=12.3

Q ss_pred             ecCCCCCccCChhhHHhHHhhh
Q psy12639         44 ECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        44 ~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      .|..|.+.|..++.|..|++.|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            4555555555555555555554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.44  E-value=3.5e-05  Score=31.26  Aligned_cols=26  Identities=38%  Similarity=0.805  Sum_probs=22.8

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      ||.|.+|++.|+.+.-|.+|.+.-|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            79999999999999999999875443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.32  E-value=7.2e-05  Score=29.45  Aligned_cols=23  Identities=43%  Similarity=0.987  Sum_probs=12.5

Q ss_pred             ceeCcc--chhhccChHHHHHHHhc
Q psy12639         13 PYACTE--CDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~h~~~   35 (134)
                      ||.|+.  |++.|...+.|.+|.+.
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhc
Confidence            555554  55555555555555543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=9.8e-05  Score=29.13  Aligned_cols=23  Identities=30%  Similarity=0.758  Sum_probs=19.5

Q ss_pred             CcccCccchhhcCHHHHHHHHHh
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      ||.|..|+..|.+..+|.+|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67888888888888888888874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00019  Score=27.91  Aligned_cols=24  Identities=38%  Similarity=0.627  Sum_probs=11.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      |+.|..|...-...+.|..|++.|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            444555554444445555554444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.19  E-value=8.1e-05  Score=29.42  Aligned_cols=20  Identities=15%  Similarity=0.160  Sum_probs=10.7

Q ss_pred             cchhhcCHHHHHHHHHhhcC
Q psy12639         76 CTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        76 C~~~f~~~~~l~~H~~~~~~   95 (134)
                      |.+.|.+...|.+|...|++
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            55555555555555555544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0002  Score=28.29  Aligned_cols=23  Identities=22%  Similarity=0.402  Sum_probs=13.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRV   64 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~   64 (134)
                      ||.|..|.......++|..|++.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            56666666655666666666554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00022  Score=30.51  Aligned_cols=27  Identities=30%  Similarity=0.640  Sum_probs=16.9

Q ss_pred             CCCccc--CccchhhcCHHHHHHHHHhhc
Q psy12639         68 EKPYAC--NLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        68 ~~~~~C--~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      ++||.|  +.|+..|.+...|..|.+.|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            566666  446666666666666666553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00015  Score=28.64  Aligned_cols=26  Identities=31%  Similarity=0.685  Sum_probs=13.2

Q ss_pred             ceeCcc--chhhccChHHHHHHHhccccC
Q psy12639         13 PYACTE--CDQKFNRNSKLKIHYNLAHCT   39 (134)
Q Consensus        13 ~~~C~~--C~~~f~~~~~l~~h~~~~h~~   39 (134)
                      ||.|..  |.+.|.+...|.+|..+ |+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~t-htg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLT-HTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHH-HHT
T ss_pred             CcCcccccccccchhhhhhhhhhcc-ccC
Confidence            455544  55555555555555443 443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00027  Score=29.22  Aligned_cols=26  Identities=19%  Similarity=0.611  Sum_probs=21.3

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      .|.|..|++.|+.+..+.+|...+.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888899999988888888877665

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.89  E-value=0.00039  Score=26.87  Aligned_cols=22  Identities=32%  Similarity=0.702  Sum_probs=12.2

Q ss_pred             CcccCccchhhcCHHHHHHHHH
Q psy12639         70 PYACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      ||+|..||+.|-...+|..|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4555555555555555555543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.88  E-value=0.00032  Score=26.46  Aligned_cols=22  Identities=36%  Similarity=0.890  Sum_probs=15.9

Q ss_pred             ceeCccchhhccChHHHHHHHh
Q psy12639         13 PYACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~   34 (134)
                      ||.|.-|...|-++.+|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777763

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.86  E-value=0.00052  Score=26.52  Aligned_cols=23  Identities=26%  Similarity=0.553  Sum_probs=17.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRV   64 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~   64 (134)
                      ||.|..||+.+..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57888888888888888877653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00037  Score=27.49  Aligned_cols=25  Identities=20%  Similarity=0.549  Sum_probs=21.6

Q ss_pred             ceeCccchhhccChHHHHHHHhccc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNLAH   37 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~~h   37 (134)
                      .|.|..||+..++...+..|+...|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            4789999999999999999987644

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00033  Score=28.31  Aligned_cols=22  Identities=36%  Similarity=0.803  Sum_probs=13.4

Q ss_pred             CceeCcc--chhhccChHHHHHHH
Q psy12639         12 KPYACTE--CDQKFNRNSKLKIHY   33 (134)
Q Consensus        12 ~~~~C~~--C~~~f~~~~~l~~h~   33 (134)
                      +||.|..  |.++|+..++-..|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            4566655  666666666655565

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.68  E-value=0.00055  Score=25.79  Aligned_cols=22  Identities=27%  Similarity=0.840  Sum_probs=15.8

Q ss_pred             CcccCccchhhcCHHHHHHHHH
Q psy12639         70 PYACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      ||.|..|...|-+..+|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5777777777777777777753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.65  E-value=0.0006  Score=25.79  Aligned_cols=24  Identities=29%  Similarity=0.772  Sum_probs=18.3

Q ss_pred             eeCccchhhccChHHHHHHHhccc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNLAH   37 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~~h   37 (134)
                      |.|+.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888876543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0009  Score=26.00  Aligned_cols=25  Identities=20%  Similarity=0.360  Sum_probs=17.0

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhc
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      |-+|+.|....++.+.|+.|-++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4467777777777777777777654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0015  Score=27.79  Aligned_cols=26  Identities=23%  Similarity=0.469  Sum_probs=16.7

Q ss_pred             CCceec--CCCCCccCChhhHHhHHhhh
Q psy12639         40 GEMYEC--CHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        40 ~~~~~C--~~C~~~~~~~~~l~~h~~~h   65 (134)
                      ++||.|  +.|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            556666  34666677666666666555

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0013  Score=29.45  Aligned_cols=24  Identities=25%  Similarity=0.479  Sum_probs=16.8

Q ss_pred             ceecCCCCCccCChhhHHhHHhhh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVH   65 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h   65 (134)
                      -|.|..|++.|.....|..|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            356777777777777777776665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0017  Score=29.12  Aligned_cols=27  Identities=19%  Similarity=0.283  Sum_probs=23.6

Q ss_pred             CCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      ..|.|..|+|.|+....|+.|-..|--
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            358899999999999999999888753

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0035  Score=24.59  Aligned_cols=26  Identities=15%  Similarity=0.365  Sum_probs=18.6

Q ss_pred             CcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      .|.|..||+...+....+-|....|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            36777777777777777777766554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0025  Score=24.63  Aligned_cols=24  Identities=29%  Similarity=0.578  Sum_probs=19.1

Q ss_pred             CcccCccchhhcCHHHHHHHHHhh
Q psy12639         70 PYACNLCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~~~   93 (134)
                      .|+|+.|+-.....++|+.|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            377888888888888888888753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.92  E-value=0.0034  Score=23.63  Aligned_cols=22  Identities=27%  Similarity=0.695  Sum_probs=14.7

Q ss_pred             cccCccchhhcCHHHHHHHHHh
Q psy12639         71 YACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        71 ~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      |.|+.|-+.|++..++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5666777777777766666654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0039  Score=25.64  Aligned_cols=26  Identities=19%  Similarity=0.600  Sum_probs=17.5

Q ss_pred             ceecCCCCCccCChhhHHhHHhhhcC
Q psy12639         42 MYECCHCARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~~h~~   67 (134)
                      .|.|..|+++|.....+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46777777777777777776554433

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.59  E-value=0.0082  Score=26.73  Aligned_cols=28  Identities=32%  Similarity=0.539  Sum_probs=19.7

Q ss_pred             CCCCcccCccchhhcCHHHHHHHHHhhc
Q psy12639         67 GEKPYACNLCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        67 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~   94 (134)
                      .+.|-.|+.|+-...++.+|++|+..-|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4566777777777777777777776533

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0053  Score=25.49  Aligned_cols=18  Identities=44%  Similarity=0.781  Sum_probs=10.5

Q ss_pred             ccCChhhHHhHHhhhcCC
Q psy12639         51 SFPCKSYLIPHLRVHTGE   68 (134)
Q Consensus        51 ~~~~~~~l~~h~~~h~~~   68 (134)
                      .|.....|..|++.|+|+
T Consensus        16 pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          16 PFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCSSHHHHHHHTHHHHCC
T ss_pred             cchhHHHHHHHHhhcCCC
Confidence            355556666666666553

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.44  E-value=0.0046  Score=25.68  Aligned_cols=21  Identities=24%  Similarity=0.407  Sum_probs=18.3

Q ss_pred             cchhhcCHHHHHHHHHhhcCC
Q psy12639         76 CTVRYLRSYELVLHLKKCHRE   96 (134)
Q Consensus        76 C~~~f~~~~~l~~H~~~~~~~   96 (134)
                      -++.|...-.|..|++.|++|
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            356799999999999999986

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.33  E-value=0.0043  Score=25.26  Aligned_cols=21  Identities=19%  Similarity=0.463  Sum_probs=16.0

Q ss_pred             CcccCccchhhcCHHHHHHHH
Q psy12639         70 PYACNLCTVRYLRSYELVLHL   90 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~   90 (134)
                      .|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            477777888888888877775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.011  Score=22.82  Aligned_cols=23  Identities=30%  Similarity=0.725  Sum_probs=14.6

Q ss_pred             ceeCccchhhccChHHHHHHHhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      |-.|+.|..+.++++.|..|.+.
T Consensus         2 pekc~ecsyscsskaalrvh~ri   24 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERI   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG
T ss_pred             CccCcccccccCcHHHHHHhhcc
Confidence            34566666666666666666654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.0076  Score=23.36  Aligned_cols=20  Identities=20%  Similarity=0.243  Sum_probs=17.0

Q ss_pred             ccchhhcCHHHHHHHHHhhc
Q psy12639         75 LCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        75 ~C~~~f~~~~~l~~H~~~~~   94 (134)
                      .|++.|...+..++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48999999999999988763

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.08  E-value=0.0076  Score=24.49  Aligned_cols=22  Identities=27%  Similarity=0.510  Sum_probs=16.0

Q ss_pred             ceecCCCCCccCChhhHHhHHh
Q psy12639         42 MYECCHCARSFPCKSYLIPHLR   63 (134)
Q Consensus        42 ~~~C~~C~~~~~~~~~l~~h~~   63 (134)
                      .|.|.-||-.|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4677777777777777777753

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.80  E-value=0.017  Score=22.94  Aligned_cols=25  Identities=36%  Similarity=0.687  Sum_probs=12.6

Q ss_pred             eecCC--CCCccCChhhHHhHHhhhcC
Q psy12639         43 YECCH--CARSFPCKSYLIPHLRVHTG   67 (134)
Q Consensus        43 ~~C~~--C~~~~~~~~~l~~h~~~h~~   67 (134)
                      |.|+.  |+..|...-.|..|.-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            44433  55555555555555555544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.61  E-value=0.012  Score=22.50  Aligned_cols=20  Identities=15%  Similarity=0.245  Sum_probs=13.8

Q ss_pred             ccchhhcCHHHHHHHHHhhc
Q psy12639         75 LCTVRYLRSYELVLHLKKCH   94 (134)
Q Consensus        75 ~C~~~f~~~~~l~~H~~~~~   94 (134)
                      .|+++|.....|+.|+..|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            37777777777777766653

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.0044  Score=30.39  Aligned_cols=24  Identities=25%  Similarity=0.523  Sum_probs=14.3

Q ss_pred             CceeCccchhhccChHHHHHHHhc
Q psy12639         12 KPYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        12 ~~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      ..|-|-.|++.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            345666666666666666666543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.47  E-value=0.019  Score=25.53  Aligned_cols=24  Identities=21%  Similarity=0.279  Sum_probs=13.5

Q ss_pred             CceecCCCCCccCChhhHHhHHhh
Q psy12639         41 EMYECCHCARSFPCKSYLIPHLRV   64 (134)
Q Consensus        41 ~~~~C~~C~~~~~~~~~l~~h~~~   64 (134)
                      .|-.|+.|+.....+.+|..|...
T Consensus        23 qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHH
Confidence            355555555555555555555554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.33  E-value=0.012  Score=24.18  Aligned_cols=23  Identities=26%  Similarity=0.613  Sum_probs=12.1

Q ss_pred             ceeCccchhhccChHHHHHHHhc
Q psy12639         13 PYACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        13 ~~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      .|.|..|.+.+...+++-.|.-+
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHHh
Confidence            45555555555555555555443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.005  Score=30.18  Aligned_cols=23  Identities=22%  Similarity=0.434  Sum_probs=18.9

Q ss_pred             CCcccCccchhhcCHHHHHHHHH
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      -.|.|..|++.|.+...|..|.+
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34788889999999999888865

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.69  E-value=0.025  Score=23.19  Aligned_cols=22  Identities=23%  Similarity=0.588  Sum_probs=11.3

Q ss_pred             CcccCccchhhcCHHHHHHHHH
Q psy12639         70 PYACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        70 ~~~C~~C~~~f~~~~~l~~H~~   91 (134)
                      .|.|..|.+.++..+++.+|--
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHH
Confidence            3555555555555555555543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.36  E-value=0.012  Score=28.23  Aligned_cols=40  Identities=15%  Similarity=0.482  Sum_probs=25.7

Q ss_pred             cCCCceeCccchhhccChHHHHHHHhccccCCCceecCCCCCcc
Q psy12639          9 TGAKPYACTECDQKFNRNSKLKIHYNLAHCTGEMYECCHCARSF   52 (134)
Q Consensus         9 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~C~~C~~~~   52 (134)
                      .....|.|+.|++.|.....++.   . -.....|.|..|+...
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~-d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---F-DPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---E-ETTTTEEBCSSSCCBC
T ss_pred             ccCCceECCCCCCCcchhhHHHh---c-CcCCCeEEecCCCCEE
Confidence            34456888888888877655442   1 2233468888887653

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.87  E-value=0.035  Score=23.66  Aligned_cols=9  Identities=33%  Similarity=0.851  Sum_probs=4.4

Q ss_pred             eecCCCCCc
Q psy12639         43 YECCHCARS   51 (134)
Q Consensus        43 ~~C~~C~~~   51 (134)
                      |.|..||..
T Consensus         6 ~~C~vCG~i   14 (37)
T d1nnqa2           6 YICPICGYT   14 (37)
T ss_dssp             EECTTTCCE
T ss_pred             EECCCCCCE
Confidence            445555543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.73  E-value=0.043  Score=23.21  Aligned_cols=10  Identities=20%  Similarity=0.374  Sum_probs=4.9

Q ss_pred             ceecCCCCCc
Q psy12639         42 MYECCHCARS   51 (134)
Q Consensus        42 ~~~C~~C~~~   51 (134)
                      -|.|..||..
T Consensus         5 ~~vC~vCGyi   14 (36)
T d1yuza2           5 FHLCPICGYI   14 (36)
T ss_dssp             EEECSSSCCE
T ss_pred             EEECCCCCCE
Confidence            3455555543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.48  E-value=0.05  Score=21.08  Aligned_cols=19  Identities=21%  Similarity=0.078  Sum_probs=14.6

Q ss_pred             CccchhhcCHHHHHHHHHh
Q psy12639         74 NLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        74 ~~C~~~f~~~~~l~~H~~~   92 (134)
                      +.|++.|+++.-|.-|.+-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4688888888888877663

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.88  E-value=0.13  Score=21.15  Aligned_cols=24  Identities=33%  Similarity=0.520  Sum_probs=13.9

Q ss_pred             CCcccCccchhhcCHHHHHHHHHh
Q psy12639         69 KPYACNLCTVRYLRSYELVLHLKK   92 (134)
Q Consensus        69 ~~~~C~~C~~~f~~~~~l~~H~~~   92 (134)
                      +.|.|+.|-+-..+...+.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            345566666666666666666554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.04  E-value=0.17  Score=19.56  Aligned_cols=24  Identities=17%  Similarity=0.614  Sum_probs=17.8

Q ss_pred             CcccC--ccchhhcCHHHHHHHHHhh
Q psy12639         70 PYACN--LCTVRYLRSYELVLHLKKC   93 (134)
Q Consensus        70 ~~~C~--~C~~~f~~~~~l~~H~~~~   93 (134)
                      .|.|.  .|...|+..+++++|...-
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrf   27 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRF   27 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhhh
Confidence            35564  4888999999988887543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.51  E-value=0.16  Score=24.10  Aligned_cols=28  Identities=25%  Similarity=0.528  Sum_probs=23.1

Q ss_pred             CCCcccCccchhhcCHHHHHHHHHhhcC
Q psy12639         68 EKPYACNLCTVRYLRSYELVLHLKKCHR   95 (134)
Q Consensus        68 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   95 (134)
                      ...|+|..|...|.+...|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3458999999999999999999887753

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.53  E-value=0.1  Score=23.19  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=18.8

Q ss_pred             eeCccchhhccChHHHHHHHhc
Q psy12639         14 YACTECDQKFNRNSKLKIHYNL   35 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~~   35 (134)
                      -+|..|+..+....+++.|+.+
T Consensus         7 ~eC~lC~vKYs~~~SvrdHiFs   28 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHIFS   28 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccCcccceeeeeecchHhhhhh
Confidence            5799999999999999998854

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.90  E-value=0.32  Score=19.50  Aligned_cols=19  Identities=37%  Similarity=0.709  Sum_probs=12.5

Q ss_pred             chhhccChHHHHHHHhccc
Q psy12639         19 CDQKFNRNSKLKIHYNLAH   37 (134)
Q Consensus        19 C~~~f~~~~~l~~h~~~~h   37 (134)
                      |+..|.+...|-.|+...|
T Consensus         9 C~~eFdtQd~LV~HinndH   27 (32)
T d2glia1           9 CSQEFDSQEQLVHHINSEH   27 (32)
T ss_dssp             CCCBCSCHHHHHHHHHHHT
T ss_pred             cccccCCHHHHHHHccccc
Confidence            6677777777776666444

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.94  E-value=0.56  Score=17.38  Aligned_cols=20  Identities=20%  Similarity=0.483  Sum_probs=11.5

Q ss_pred             ccCccchhhcCHHHHHHHHH
Q psy12639         72 ACNLCTVRYLRSYELVLHLK   91 (134)
Q Consensus        72 ~C~~C~~~f~~~~~l~~H~~   91 (134)
                      .|+.|...|.+...-..|-.
T Consensus         2 vcpycslrf~sp~lk~ehe~   21 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHES   21 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHHH
T ss_pred             CCCcceeeeCCHHHhhHhhh
Confidence            36666666666655555543

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=81.66  E-value=0.33  Score=21.45  Aligned_cols=11  Identities=27%  Similarity=1.102  Sum_probs=5.7

Q ss_pred             eeCccchhhcc
Q psy12639         14 YACTECDQKFN   24 (134)
Q Consensus        14 ~~C~~C~~~f~   24 (134)
                      |.|..||..+.
T Consensus         4 y~C~~CgyiYd   14 (45)
T d6rxna_           4 YVCNVCGYEYD   14 (45)
T ss_dssp             EEETTTCCEEC
T ss_pred             eEeCCCCeEEC
Confidence            55555554443

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.64  E-value=0.59  Score=19.22  Aligned_cols=21  Identities=29%  Similarity=0.504  Sum_probs=17.6

Q ss_pred             eeCccchhhccChHHHHHHHh
Q psy12639         14 YACTECDQKFNRNSKLKIHYN   34 (134)
Q Consensus        14 ~~C~~C~~~f~~~~~l~~h~~   34 (134)
                      --|..|+-.|.....+..|.+
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             hHHhhCCceehhHHHHHHHHH
Confidence            358889999999999988875

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.54  E-value=0.59  Score=21.36  Aligned_cols=12  Identities=42%  Similarity=1.007  Sum_probs=6.4

Q ss_pred             eeCccchhhccC
Q psy12639         14 YACTECDQKFNR   25 (134)
Q Consensus        14 ~~C~~C~~~f~~   25 (134)
                      |.|..||..+..
T Consensus         4 y~C~~CgyiYd~   15 (53)
T d1iroa_           4 YTCTVCGYIYNP   15 (53)
T ss_dssp             EEETTTCCEECT
T ss_pred             eEcCCCCcEECc
Confidence            555555555443