Psyllid ID: psy12655
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | 2.2.26 [Sep-21-2011] | |||||||
| P15007 | 500 | Enolase OS=Drosophila mel | yes | N/A | 0.993 | 0.594 | 0.821 | 1e-135 | |
| Q27527 | 434 | Enolase OS=Caenorhabditis | yes | N/A | 0.986 | 0.679 | 0.759 | 1e-130 | |
| Q5R6Y1 | 434 | Alpha-enolase OS=Pongo ab | yes | N/A | 0.989 | 0.682 | 0.747 | 1e-127 | |
| P06733 | 434 | Alpha-enolase OS=Homo sap | yes | N/A | 0.989 | 0.682 | 0.747 | 1e-127 | |
| Q4R5L2 | 434 | Alpha-enolase OS=Macaca f | N/A | N/A | 0.989 | 0.682 | 0.744 | 1e-127 | |
| P04764 | 434 | Alpha-enolase OS=Rattus n | yes | N/A | 0.989 | 0.682 | 0.734 | 1e-125 | |
| O02654 | 434 | Enolase OS=Doryteuthis pe | N/A | N/A | 0.989 | 0.682 | 0.709 | 1e-124 | |
| Q9PVK2 | 434 | Alpha-enolase OS=Alligato | N/A | N/A | 0.989 | 0.682 | 0.717 | 1e-124 | |
| Q9XSJ4 | 434 | Alpha-enolase OS=Bos taur | yes | N/A | 0.989 | 0.682 | 0.723 | 1e-124 | |
| P17182 | 434 | Alpha-enolase OS=Mus musc | yes | N/A | 0.989 | 0.682 | 0.720 | 1e-124 |
| >sp|P15007|ENO_DROME Enolase OS=Drosophila melanogaster GN=Eno PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/297 (82%), Positives = 264/297 (88%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I I ARQI+DSRGNPTVEVDLTTELGLFRAAVPSGASTG++EALELRDNDKA+YHGK
Sbjct: 68 MTIKAIKARQIYDSRGNPTVEVDLTTELGLFRAAVPSGASTGVHEALELRDNDKANYHGK 127
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
V KAVG +N+ + P L+K + +V Q ID FMIKLDGTENKSKFGANAILGVSLAVAK
Sbjct: 128 SVLKAVGHVNDTLGPELIKANLDVVDQASIDNFMIKLDGTENKSKFGANAILGVSLAVAK 187
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKGVPLYKH+ADLAGN IILPVPAFNVINGGSHAGNKLAMQEFMILPTGA+SF+E
Sbjct: 188 AGAAKKGVPLYKHIADLAGNKEIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTE 247
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+GSEVYHHLK VI KFGLDATAVGDEGGFAPNI NKE L LI +AI KAGYTGK+
Sbjct: 248 AMKMGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNIQSNKEALNLISDAIAKAGYTGKI 307
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
EIGMDVAASEF+K+GQYDLDFKN SDKSQWLPADKL LYQEFIK++PIVSIEDP
Sbjct: 308 EIGMDVAASEFYKDGQYDLDFKNEKSDKSQWLPADKLANLYQEFIKDFPIVSIEDPF 364
|
Drosophila melanogaster (taxid: 7227) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 1 |
| >sp|Q27527|ENO_CAEEL Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/295 (75%), Positives = 257/295 (87%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MPI+KIHARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTG++EALELRD DKA + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV IN IAPAL+ + F+VT QK+ID+FM+ LDG+ENK GANAILGVSLAVAK
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA KG+PLYK++A+LAG ++LPVPAFNVINGGSHAGNKLAMQEFMILP GASSF+E
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM++GSEVYHHLK I ++GLDATAVGDEGGFAPNI DNKEGL L+ AI+KAGYTGK+
Sbjct: 181 AMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQDNKEGLDLLNTAIDKAGYTGKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIED 295
IGMDVAASEFFK+G+YDLDFKNP SD S+WL ++LT LYQ FIKEYP+VSIED
Sbjct: 241 SIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIED 295
|
Caenorhabditis elegans (taxid: 6239) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|Q5R6Y1|ENOA_PONAB Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/297 (74%), Positives = 255/297 (85%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV+KAV IN IAPAL+ + VT+Q++ID+ MI++DGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA +KGVPLY+H+ADLAGNS +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA++F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKEGL L+ AI KAGYT KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEFF+ G+YDLDFK+P+ D S+++ D+L LY+ FIK+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFFRSGKYDLDFKSPD-DPSRYISPDQLADLYKSFIKDYPVVSIEDPF 296
|
Multifunctional enzyme that, as well as its role in glycolysis, plays a part in various processes such as growth control, hypoxia tolerance and allergic responses. May also function in the intravascular and pericellular fibrinolytic system due to its ability to serve as a receptor and activator of plasminogen on the cell surface of several cell-types such as leukocytes and neurons. Stimulates immunoglobulin production. Pongo abelii (taxid: 9601) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|P06733|ENOA_HUMAN Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/297 (74%), Positives = 255/297 (85%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV+KAV IN IAPAL+ + VT+Q++ID+ MI++DGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA +KGVPLY+H+ADLAGNS +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA++F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKEGL L+ AI KAGYT KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEFF+ G+YDLDFK+P+ D S+++ D+L LY+ FIK+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFFRSGKYDLDFKSPD-DPSRYISPDQLADLYKSFIKDYPVVSIEDPF 296
|
MBP1 binds to the myc promoter and acts as a transcriptional repressor. May be a tumor suppressor. Homo sapiens (taxid: 9606) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|Q4R5L2|ENOA_MACFA Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/297 (74%), Positives = 255/297 (85%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+HAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKVHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV+KAV IN IAPAL+ + VT+Q++ID+ MI++DGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA +KGVPLY+H+ADLAGNS +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA++F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKEGL L+ AI KAGYT KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEFF+ G+YDLDFK+P+ D S+++ D+L LY+ FIK+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFFRSGKYDLDFKSPD-DPSRYISPDQLADLYKSFIKDYPVVSIEDPF 296
|
Multifunctional enzyme that, as well as its role in glycolysis, plays a part in various processes such as growth control, hypoxia tolerance and allergic responses. May also function in the intravascular and pericellular fibrinolytic system due to its ability to serve as a receptor and activator of plasminogen on the cell surface of several cell-types such as leukocytes and neurons. Stimulates immunoglobulin production. Macaca fascicularis (taxid: 9541) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|P04764|ENOA_RAT Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/297 (73%), Positives = 252/297 (84%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK + GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV+KAV IN IAPAL+ + V +Q++ID+ MI++DGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVVEQEKIDQLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA +KGVPLY+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GASSF E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGYT +V
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKSAIAKAGYTDQV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEF++ G+YDLDFK+P+ D S+++ D+L LY+ FIK+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRAGKYDLDFKSPD-DASRYITPDQLADLYKSFIKDYPVVSIEDPF 296
|
Multifunctional enzyme that, as well as its role in glycolysis, plays a part in various processes such as growth control, hypoxia tolerance and allergic responses. May also function in the intravascular and pericellular fibrinolytic system due to its ability to serve as a receptor and activator of plasminogen on the cell surface of several cell-types such as leukocytes and neurons. Stimulates immunoglobulin production. Rattus norvegicus (taxid: 10116) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|O02654|ENO_DORPE Enolase OS=Doryteuthis pealeii PE=2 SV=1 | Back alignment and function description |
|---|
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/296 (70%), Positives = 247/296 (83%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+H+RQIFDSRGNPTVEVDL T+ G+FRAAVPSGASTGIYEALE+RD D +YHGK
Sbjct: 1 MVIKKVHSRQIFDSRGNPTVEVDLWTDKGMFRAAVPSGASTGIYEALEMRDKDAKNYHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
+ AVG +N IAPAL+ + + Q +D F++ LDGTENK+K GANAILGVSLAV K
Sbjct: 61 TLFNAVGNVNKIIAPALVDKKMDEKDQTAVDNFLLALDGTENKNKLGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAA KGVPLY+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILPTGA +F+E
Sbjct: 121 AGAAAKGVPLYRHIADLAGNKEVILPVPAFNVINGGSHAGNKLAMQEFMILPTGAKNFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+G+EVYHHLK VI K+G DA VGDEGGFAPNILDNKEGL L+ AI AGYT ++
Sbjct: 181 AMKMGTEVYHHLKSVIKKKYGQDACNVGDEGGFAPNILDNKEGLELLKTAIANAGYTAEI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEF KE +YDLDFKNP+S+ + WL +D+L +Y++F+K YP+VSIEDP
Sbjct: 241 EIGMDVAASEFCKEKKYDLDFKNPDSNPNDWLTSDQLADVYKDFVKNYPVVSIEDP 296
|
Loligo pealeii (taxid: 1051067) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|Q9PVK2|ENOA_ALLMI Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3 | Back alignment and function description |
|---|
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/297 (71%), Positives = 252/297 (84%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK + GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV+KAV +N IAPAL+ ++ V +Q++ID M+++DG+ENKSKFGANAILGVSLAV K
Sbjct: 61 GVSKAVAHVNKTIAPALISKNISVVEQEKIDRLMLEMDGSENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAA+KGVPLY+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA SF E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFKE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGY+ K+
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKNAINKAGYSDKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEF+++G+YDLDFK+P+ D S+++ D+L LY+ F+K YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRDGKYDLDFKSPD-DPSRYITPDQLADLYKSFVKNYPVVSIEDPF 296
|
Alligator mississippiensis (taxid: 8496) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|Q9XSJ4|ENOA_BOVIN Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/297 (72%), Positives = 252/297 (84%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+HAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKVHAREIFDSRGNPTVEVDLFTAKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV+KAV IN IAPAL+ + V +Q++ID+ MI++DGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA +KGVPLY+H+ADLAGN+ +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA +F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNAEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAENFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGY+ KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKNAIGKAGYSDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEF++ G+YDLDFK+P+ D S+++ D+L LY+ FI++YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRSGKYDLDFKSPD-DPSRYITPDELANLYKSFIRDYPVVSIEDPF 296
|
Multifunctional enzyme that, as well as its role in glycolysis, plays a part in various processes such as growth control, hypoxia tolerance and allergic responses. May also function in the intravascular and pericellular fibrinolytic system due to its ability to serve as a receptor and activator of plasminogen on the cell surface of several cell-types such as leukocytes and neurons. Stimulates immunoglobulin production. Bos taurus (taxid: 9913) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
| >sp|P17182|ENOA_MOUSE Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/297 (72%), Positives = 251/297 (84%), Gaps = 1/297 (0%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I +IHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK + GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV++AV IN IAPAL+ + V +Q++ID+ MI++DGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGA +KGVPLY+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GASSF E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGYT +V
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAIAKAGYTDQV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
IGMDVAASEF++ G+YDLDFK+P+ D S+++ D+L LY+ F++ YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRSGKYDLDFKSPD-DPSRYITPDQLADLYKSFVQNYPVVSIEDPF 296
|
Multifunctional enzyme that, as well as its role in glycolysis, plays a part in various processes such as growth control, hypoxia tolerance and allergic responses (By similarity). May also function in the intravascular and pericellular fibrinolytic system due to its ability to serve as a receptor and activator of plasminogen on the cell surface of several cell-types such as leukocytes and neurons. Stimulates immunoglobulin production. Mus musculus (taxid: 10090) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| 332375414 | 433 | unknown [Dendroctonus ponderosae] | 0.993 | 0.685 | 0.821 | 1e-141 | |
| 53830714 | 433 | enolase [Oncometopia nigricans] | 0.993 | 0.685 | 0.861 | 1e-140 | |
| 86450230 | 433 | enolase [Blattella germanica] | 0.989 | 0.683 | 0.804 | 1e-140 | |
| 312371756 | 433 | hypothetical protein AND_21699 [Anophele | 0.989 | 0.683 | 0.817 | 1e-138 | |
| 194762349 | 499 | GF15876 [Drosophila ananassae] gi|190617 | 0.993 | 0.595 | 0.801 | 1e-138 | |
| 58390364 | 433 | AGAP007827-PA [Anopheles gambiae str. PE | 0.989 | 0.683 | 0.817 | 1e-137 | |
| 157121051 | 433 | enolase [Aedes aegypti] gi|108882996|gb| | 0.989 | 0.683 | 0.814 | 1e-137 | |
| 157674465 | 433 | putative enolase [Lutzomyia longipalpis] | 0.989 | 0.683 | 0.817 | 1e-137 | |
| 289741265 | 436 | enolase [Glossina morsitans morsitans] | 0.986 | 0.676 | 0.803 | 1e-136 | |
| 242019485 | 496 | Enolase, putative [Pediculus humanus cor | 0.989 | 0.596 | 0.797 | 1e-136 |
| >gi|332375414|gb|AEE62848.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/297 (82%), Positives = 268/297 (90%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MPI I AR IFDSRGNPTVEVDL T+LGLFRAAVPSGASTGIYEALELRDNDK+ YHGK
Sbjct: 1 MPIKSILARNIFDSRGNPTVEVDLVTDLGLFRAAVPSGASTGIYEALELRDNDKSRYHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
V KA+ +N IAP LLK EVTQQ EIDEF+IKLDGTENKSKFGANAILGVSLAV K
Sbjct: 61 SVQKAIDNVNKSIAPELLKAGLEVTQQTEIDEFLIKLDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKG+PLYKH+A+LAGN +IILPVPAFNVINGGSHAGNKLAMQEFMILPTGA++F+E
Sbjct: 121 AGAAKKGIPLYKHIAELAGNKDIILPVPAFNVINGGSHAGNKLAMQEFMILPTGAANFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYHHLKKVIN KFGLDATAVGDEGGFAPNIL+NKE L LI +AI KAGYTGKV
Sbjct: 181 AMRIGTEVYHHLKKVINNKFGLDATAVGDEGGFAPNILNNKEALDLINDAIAKAGYTGKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
EIGMDVAASEF+++GQYDLDFKNP SDKS+WL +KL ALYQ+FIK++PIVSIEDP
Sbjct: 241 EIGMDVAASEFYRDGQYDLDFKNPASDKSKWLSPEKLQALYQDFIKDFPIVSIEDPF 297
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|53830714|gb|AAU95200.1| enolase [Oncometopia nigricans] | Back alignment and taxonomy information |
|---|
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/297 (86%), Positives = 275/297 (92%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MPI KIHARQIFDSRGNPTVEVDL TELGLFRAAVPSGASTGIYEALELRD DK Y GK
Sbjct: 1 MPIQKIHARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGIYEALELRDGDKGSYLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAVG INNDIAPALLK EVTQQKEID+FM+KLDGTENKSKFGANAILGVSLAVAK
Sbjct: 61 GVLKAVGNINNDIAPALLKAGLEVTQQKEIDQFMLKLDGTENKSKFGANAILGVSLAVAK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKG+PL+K++A+LAGNSNI+LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSF+E
Sbjct: 121 AGAAKKGIPLFKYIAELAGNSNIVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+GSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDN EGL LI EAI+ AGYTGK+
Sbjct: 181 AMKMGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNHEGLALIQEAIKNAGYTGKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+IGMDVAASEF KEG+YDLDFKNPNSDKS+W+ +LT +YQ FIKE+PIVSIEDP
Sbjct: 241 DIGMDVAASEFHKEGKYDLDFKNPNSDKSKWVDMTQLTEIYQGFIKEFPIVSIEDPF 297
|
Source: Oncometopia nigricans Species: Oncometopia nigricans Genus: Oncometopia Family: Cicadellidae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|86450230|gb|ABC96322.1| enolase [Blattella germanica] | Back alignment and taxonomy information |
|---|
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/296 (80%), Positives = 272/296 (91%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MP+ K+ AR+IFDSRGNPT+EVDLTT+LGLFRAAVPSGASTGI+EALELRDNDK +YHGK
Sbjct: 1 MPLQKLFARRIFDSRGNPTIEVDLTTDLGLFRAAVPSGASTGIHEALELRDNDKKNYHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
V+KA+ +N I P LLK+SFE TQQKEID+FM+KLDGT NKSK GANAILGVS+AV K
Sbjct: 61 DVSKAIDNVNKIIVPELLKQSFEATQQKEIDDFMLKLDGTPNKSKLGANAILGVSIAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKGVPLY+H+ADLAG ++ILPVPAFNVINGGSHAGNKLAMQEFMILPTGA++F+E
Sbjct: 121 AGAAKKGVPLYRHIADLAGVPDVILPVPAFNVINGGSHAGNKLAMQEFMILPTGAATFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+GSEVYHHLK VI KFGLDATAVGDEGGFAPNIL+NK+GL LI +AIEKAGYTGK+
Sbjct: 181 AMKMGSEVYHHLKNVIQGKFGLDATAVGDEGGFAPNILNNKDGLDLIKDAIEKAGYTGKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEFF+EG+YDLDFKNPN+DKS+W+ D+LTALY EFIKE+P+VSIEDP
Sbjct: 241 EIGMDVAASEFFREGKYDLDFKNPNTDKSKWIDKDQLTALYMEFIKEFPVVSIEDP 296
|
Source: Blattella germanica Species: Blattella germanica Genus: Blattella Family: Ectobiidae Order: Blattodea Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312371756|gb|EFR19863.1| hypothetical protein AND_21699 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/296 (81%), Positives = 261/296 (88%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MP I ARQIFDSRGNPTVEVDL T+LGLFRAAVPSGASTG++EALELRDN+KA++HGK
Sbjct: 1 MPFKSIKARQIFDSRGNPTVEVDLVTDLGLFRAAVPSGASTGVHEALELRDNEKANWHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV IN IAPA+L VTQQKE+DE M+KLDGTENKSK GANAILGVSLA+ K
Sbjct: 61 GVLKAVENINKTIAPAVLASGLCVTQQKELDELMLKLDGTENKSKLGANAILGVSLAICK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKGVPLYKH+ADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSF+E
Sbjct: 121 AGAAKKGVPLYKHIADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMKIGSEVYHHLK VI KFGLDATAVGDEGGFAPNIL+NKE L LI +AI KAGYTGKV
Sbjct: 181 AMKIGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNILENKEALNLIQDAIAKAGYTGKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEF K+G+YDLDFKNP SD S WL D L +YQ FIK++PIVSIEDP
Sbjct: 241 EIGMDVAASEFHKDGKYDLDFKNPKSDASAWLTPDALEQMYQGFIKDFPIVSIEDP 296
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194762349|ref|XP_001963312.1| GF15876 [Drosophila ananassae] gi|190617009|gb|EDV32533.1| GF15876 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/297 (80%), Positives = 262/297 (88%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I I ARQI+DSRGNPTVEVDLTTELGLFRAAVPSGASTG++EALELRD DKA+YHGK
Sbjct: 67 MTIKSIKARQIYDSRGNPTVEVDLTTELGLFRAAVPSGASTGVHEALELRDGDKANYHGK 126
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
V KAVG +N+ + P L+K + +V Q ID FM+KLDGTENKSKFGANAILGVSLAV K
Sbjct: 127 SVLKAVGHVNDTLGPELIKANLDVVDQAAIDNFMLKLDGTENKSKFGANAILGVSLAVCK 186
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKK VPLYKH+ADLA N++IILPVPAFNVINGGSHAGNKLAMQEFMILPTGA+SF+E
Sbjct: 187 AGAAKKNVPLYKHIADLAKNTDIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTE 246
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+GSEVYHHLK VI KFGLDAT+VGDEGGFAPNI NKE L LI +AI KAGYTGK+
Sbjct: 247 AMKMGSEVYHHLKNVIKAKFGLDATSVGDEGGFAPNIQSNKEALCLITDAIAKAGYTGKI 306
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
EIGMDVAASEFF++GQYDLDFKNP SDKSQWL +KLT LYQEFIKE+PIVSIEDP
Sbjct: 307 EIGMDVAASEFFRDGQYDLDFKNPASDKSQWLSPEKLTNLYQEFIKEFPIVSIEDPF 363
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|58390364|ref|XP_317672.2| AGAP007827-PA [Anopheles gambiae str. PEST] gi|55237886|gb|EAA12254.2| AGAP007827-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/296 (81%), Positives = 261/296 (88%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MP I ARQIFDSRGNPTVEVDL T+LGLFRAAVPSGASTG++EALELRDN+KA++HGK
Sbjct: 1 MPFKSIKARQIFDSRGNPTVEVDLVTDLGLFRAAVPSGASTGVHEALELRDNEKANWHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV IN IAPA+L + VTQQKE+DE M+KLDGTENKSK GANAILGVSLA+ K
Sbjct: 61 GVLKAVENINKIIAPAVLSSNLCVTQQKELDELMLKLDGTENKSKLGANAILGVSLAICK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKGVPLYKH+ADLAGN NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSF+E
Sbjct: 121 AGAAKKGVPLYKHIADLAGNGNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMKIGSEVYHHLK VI KFGLDATAVGDEGGFAPNIL+NKE L LI +AI KAGYTGKV
Sbjct: 181 AMKIGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNILENKEALNLIQDAIAKAGYTGKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEF KEG+YDLDFKNP SD S WL D L +YQ FIK++PIVSIEDP
Sbjct: 241 EIGMDVAASEFHKEGKYDLDFKNPKSDPSAWLTPDALEQMYQGFIKDFPIVSIEDP 296
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157121051|ref|XP_001653750.1| enolase [Aedes aegypti] gi|108882996|gb|EAT47221.1| AAEL001668-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/296 (81%), Positives = 260/296 (87%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MP I ARQIFDSRGNPTVEVDL T+LGLFRAAVPSGASTG++EALELRDN KA +HGK
Sbjct: 1 MPFKSIKARQIFDSRGNPTVEVDLVTDLGLFRAAVPSGASTGVHEALELRDNVKADWHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV IN IAPA+L VTQQKE+DE M+KLDGTENKSK GANAILGVSLAV K
Sbjct: 61 GVLKAVENINKTIAPAVLNSGLCVTQQKELDELMLKLDGTENKSKLGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAKKG+PLYKH+A+L+GN NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSF+E
Sbjct: 121 AGAAKKGIPLYKHIAELSGNGNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMKIGSEVYHHLK VI KFGLDATAVGDEGGFAPNIL+NKE L LI +AI KAGYTGKV
Sbjct: 181 AMKIGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNILENKEALNLIQDAIAKAGYTGKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEF K+G+YDLDFKNPNSDKS WL D L +YQ FIK++PIVSIEDP
Sbjct: 241 EIGMDVAASEFHKDGKYDLDFKNPNSDKSAWLTPDALEGMYQGFIKDFPIVSIEDP 296
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157674465|gb|ABV60328.1| putative enolase [Lutzomyia longipalpis] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/296 (81%), Positives = 263/296 (88%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KI ARQIFDSRGNPTVEVDLTT LG+FRAAVPSGASTG++EALELRDNDK +YHGK
Sbjct: 1 MVIQKIVARQIFDSRGNPTVEVDLTTNLGMFRAAVPSGASTGVHEALELRDNDKNNYHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV IN IAP ++K VT Q+++D FM+KLDGTENKSKFGANAILGVSLAV K
Sbjct: 61 GVLKAVENINKIIAPEVIKSGICVTAQEDMDNFMLKLDGTENKSKFGANAILGVSLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAA KGVPLY+H+A+LAGN NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA+SF+E
Sbjct: 121 AGAAAKGVPLYQHIANLAGNPNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMKIGSEVYHHLKKVIN KFGLDATAVGDEGGFAPNIL+NK+ L LI +AI KAGYTGKV
Sbjct: 181 AMKIGSEVYHHLKKVINNKFGLDATAVGDEGGFAPNILNNKDALFLIQDAIAKAGYTGKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEF K+G YDLDFKNPNSDKS WL DKLT LY EF+KE+PI SIEDP
Sbjct: 241 EIGMDVAASEFHKDGLYDLDFKNPNSDKSLWLSPDKLTELYMEFVKEFPITSIEDP 296
|
Source: Lutzomyia longipalpis Species: Lutzomyia longipalpis Genus: Lutzomyia Family: Psychodidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|289741265|gb|ADD19380.1| enolase [Glossina morsitans morsitans] | Back alignment and taxonomy information |
|---|
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/295 (80%), Positives = 263/295 (89%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MPI IHARQIFDSRGNPTVEVDL+TELGLFRAAVPSGASTG++EALELRD +K +YHGK
Sbjct: 1 MPIKSIHARQIFDSRGNPTVEVDLSTELGLFRAAVPSGASTGVHEALELRDKEKNNYHGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
V KAV +N I P L+K + EVT+Q++IDEFMIKLDGTENKSK+GANAILG+SLAV K
Sbjct: 61 SVLKAVCHVNEIIGPELIKANLEVTEQEKIDEFMIKLDGTENKSKYGANAILGISLAVCK 120
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAAK G+PLYKH+A+LA +IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSF+E
Sbjct: 121 AGAAKNGLPLYKHIANLASIKDIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFTE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+GSEVYHHLKKVIN KFGLDATAVGDEGGFAPNI NKE L LI +AIE GYTGK+
Sbjct: 181 AMKMGSEVYHHLKKVINDKFGLDATAVGDEGGFAPNIQSNKEALCLIKDAIELGGYTGKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIED 295
EIGMDVAASEFFK+GQYDLDFKNP+SDKS+WL +KL LYQEFI E+PIVSIED
Sbjct: 241 EIGMDVAASEFFKDGQYDLDFKNPSSDKSKWLSPEKLLGLYQEFINEFPIVSIED 295
|
Source: Glossina morsitans morsitans Species: Glossina morsitans Genus: Glossina Family: Glossinidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242019485|ref|XP_002430191.1| Enolase, putative [Pediculus humanus corporis] gi|212515287|gb|EEB17453.1| Enolase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/296 (79%), Positives = 262/296 (88%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M + I ARQIFDSRGNPTVEVDL T+ GLFRAAVPSGASTGIYEALELRDNDK YHGK
Sbjct: 65 MGLKSIQARQIFDSRGNPTVEVDLLTDKGLFRAAVPSGASTGIYEALELRDNDKTQYHGK 124
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
V+KAV INN IAP LLK++F+ TQQKEIDEFMIKLDGT+NKSK GANAILGVSLAV K
Sbjct: 125 SVSKAVNNINNIIAPELLKQNFDATQQKEIDEFMIKLDGTDNKSKLGANAILGVSLAVCK 184
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AGAA+KGV LY+H+A+LAGN NI+LP PAFNVINGGSHAGNKLAMQEFMILPTGA+SF+E
Sbjct: 185 AGAAEKGVSLYRHIANLAGNDNIVLPTPAFNVINGGSHAGNKLAMQEFMILPTGATSFTE 244
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM++GSEVYHHLKKVI+ KFGLDATAVGDEGGFAPNIL+NKE L LI EAI KAGY GK+
Sbjct: 245 AMRMGSEVYHHLKKVIHAKFGLDATAVGDEGGFAPNILNNKEALLLITEAISKAGYEGKI 304
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
+IGMDVAASEF+K Y+LDFKNPN DKSQ + +KLT LY EF+KE+PIVSIEDP
Sbjct: 305 DIGMDVAASEFYKNELYNLDFKNPNYDKSQCIDYEKLTELYMEFLKEFPIVSIEDP 360
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| FB|FBgn0000579 | 500 | Eno "Enolase" [Drosophila mela | 0.989 | 0.592 | 0.760 | 5.4e-118 | |
| WB|WBGene00011884 | 434 | enol-1 [Caenorhabditis elegans | 0.986 | 0.679 | 0.705 | 2.6e-109 | |
| UNIPROTKB|P06733 | 434 | ENO1 "Alpha-enolase" [Homo sap | 0.986 | 0.679 | 0.695 | 6.5e-106 | |
| ZFIN|ZDB-GENE-040426-1651 | 433 | eno1b "enolase 1b, (alpha)" [D | 0.986 | 0.681 | 0.682 | 4.6e-105 | |
| ZFIN|ZDB-GENE-030131-6048 | 432 | eno1a "enolase 1a, (alpha)" [D | 0.986 | 0.682 | 0.675 | 6.7e-104 | |
| RGD|2553 | 434 | Eno1 "enolase 1, (alpha)" [Rat | 0.986 | 0.679 | 0.682 | 8.6e-104 | |
| UNIPROTKB|F1MB08 | 434 | ENO1 "Alpha-enolase" [Bos taur | 0.986 | 0.679 | 0.672 | 3.7e-103 | |
| UNIPROTKB|Q9XSJ4 | 434 | ENO1 "Alpha-enolase" [Bos taur | 0.986 | 0.679 | 0.672 | 3.7e-103 | |
| UNIPROTKB|F1NZ78 | 434 | ENO1 "Alpha-enolase" [Gallus g | 0.986 | 0.679 | 0.668 | 6e-103 | |
| UNIPROTKB|P51913 | 434 | ENO1 "Alpha-enolase" [Gallus g | 0.986 | 0.679 | 0.668 | 1.3e-102 |
| FB|FBgn0000579 Eno "Enolase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 225/296 (76%), Positives = 245/296 (82%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I I ARQI+DSRGNPTVEVDLTTELGLFRAAVPSGASTG++EALELRDNDKA+YHGK
Sbjct: 68 MTIKAIKARQIYDSRGNPTVEVDLTTELGLFRAAVPSGASTGVHEALELRDNDKANYHGK 127
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
V KAVG +N+ + P L+K + +V Q ID FMIKLDGTENKSKFGANAI
Sbjct: 128 SVLKAVGHVNDTLGPELIKANLDVVDQASIDNFMIKLDGTENKSKFGANAILGVSLAVAK 187
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
YKH+ADLAGN IILPVPAFNVINGGSHAGNKLAMQEFMILPTGA+SF+E
Sbjct: 188 AGAAKKGVPLYKHIADLAGNKEIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTE 247
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AMK+GSEVYHHLK VI KFGLDATAVGDEGGFAPNI NKE L LI +AI KAGYTGK+
Sbjct: 248 AMKMGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNIQSNKEALNLISDAIAKAGYTGKI 307
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EIGMDVAASEF+K+GQYDLDFKN SDKSQWLPADKL LYQEFIK++PIVSIEDP
Sbjct: 308 EIGMDVAASEFYKDGQYDLDFKNEKSDKSQWLPADKLANLYQEFIKDFPIVSIEDP 363
|
|
| WB|WBGene00011884 enol-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 208/295 (70%), Positives = 240/295 (81%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
MPI+KIHARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTG++EALELRD DKA + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV KAV IN IAPAL+ + F+VT QK+ID+FM+ LDG+ENK GANAI
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
YK++A+LAG ++LPVPAFNVINGGSHAGNKLAMQEFMILP GASSF+E
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM++GSEVYHHLK I ++GLDATAVGDEGGFAPNI DNKEGL L+ AI+KAGYTGK+
Sbjct: 181 AMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQDNKEGLDLLNTAIDKAGYTGKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIED 295
IGMDVAASEFFK+G+YDLDFKNP SD S+WL ++LT LYQ FIKEYP+VSIED
Sbjct: 241 SIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIED 295
|
|
| UNIPROTKB|P06733 ENO1 "Alpha-enolase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 206/296 (69%), Positives = 238/296 (80%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV IN IAPAL+ + VT+Q++ID+ MI++DGTENKSKFGANAI
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGNS +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA++F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKEGL L+ AI KAGYT KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEFF+ G+YDLDFK+P+ D S+++ D+L LY+ FIK+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFFRSGKYDLDFKSPD-DPSRYISPDQLADLYKSFIKDYPVVSIEDP 295
|
|
| ZFIN|ZDB-GENE-040426-1651 eno1b "enolase 1b, (alpha)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 202/296 (68%), Positives = 238/296 (80%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL TE GLFRAAVPSGASTGIYEALELRDNDK+ Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTERGLFRAAVPSGASTGIYEALELRDNDKSRYLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV +N IAPAL+ + V +Q++ID+FM++LDGTENKS+FGANAI
Sbjct: 61 GVSKAVENVNQHIAPALIGQGIPVVEQEKIDQFMLELDGTENKSRFGANAILGVSLAACK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GASSF E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGYT +V
Sbjct: 181 AMRIGAEVYHNLKNVIKQKYGQDATNVGDEGGFAPNILENKEALELLKNAISKAGYTDEV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF+++GQYDLDFK+P+ D +++ D+L LY+ FI++YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRDGQYDLDFKSPD-DPDRYISPDELADLYKSFIEDYPVVSIEDP 295
|
|
| ZFIN|ZDB-GENE-030131-6048 eno1a "enolase 1a, (alpha)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 200/296 (67%), Positives = 235/296 (79%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T+ GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTKKGLFRAAVPSGASTGIYEALELRDNDKTRYLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV IN IAP L+ ++ V +Q++ID+ M+ +DGT+NKSKFGANAI
Sbjct: 61 GVSKAVEHINKTIAPGLVSQNVSVLEQEKIDKLMLDMDGTDNKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GAS+F E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASNFKE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGYT K+
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKNAISKAGYTDKI 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF+K G+YDLDFK+P+ D S+++ DKL LY+ F+K+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYKGGKYDLDFKSPD-DPSRYISPDKLADLYKSFVKDYPVVSIEDP 295
|
|
| RGD|2553 Eno1 "enolase 1, (alpha)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 202/296 (68%), Positives = 235/296 (79%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK + GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV IN IAPAL+ + V +Q++ID+ MI++DGTENKSKFGANAI
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVVEQEKIDQLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GASSF E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGYT +V
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKSAIAKAGYTDQV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF++ G+YDLDFK+P+ D S+++ D+L LY+ FIK+YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRAGKYDLDFKSPD-DASRYITPDQLADLYKSFIKDYPVVSIEDP 295
|
|
| UNIPROTKB|F1MB08 ENO1 "Alpha-enolase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 199/296 (67%), Positives = 235/296 (79%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+HAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKVHAREIFDSRGNPTVEVDLFTAKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV IN IAPAL+ + V +Q++ID+ MI++DGTENKSKFGANAI
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN+ +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA +F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNAEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAENFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGY+ KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKNAIGKAGYSDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF++ G+YDLDFK+P+ D S+++ D+L LY+ FI++YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRSGKYDLDFKSPD-DPSRYITPDELANLYKSFIRDYPVVSIEDP 295
|
|
| UNIPROTKB|Q9XSJ4 ENO1 "Alpha-enolase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 199/296 (67%), Positives = 235/296 (79%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+HAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKVHAREIFDSRGNPTVEVDLFTAKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV IN IAPAL+ + V +Q++ID+ MI++DGTENKSKFGANAI
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN+ +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA +F E
Sbjct: 121 AGAVEKGVPLYRHIADLAGNAEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAENFRE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGY+ KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKNAIGKAGYSDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF++ G+YDLDFK+P+ D S+++ D+L LY+ FI++YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRSGKYDLDFKSPD-DPSRYITPDELANLYKSFIRDYPVVSIEDP 295
|
|
| UNIPROTKB|F1NZ78 ENO1 "Alpha-enolase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 198/296 (66%), Positives = 235/296 (79%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTNKGLFRAAVPSGASTGIYEALELRDNDKTRYLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV +N IAPAL+ ++ V +Q++ID+ M+++DGTENKSKFGANAI
Sbjct: 61 GVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA +F E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADNFKE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGY+ KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAIGKAGYSDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF+++G+YDLDFK+P+ D S+++ D+L LY+ F+K YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRDGKYDLDFKSPD-DPSRYISPDQLADLYKGFVKNYPVVSIEDP 295
|
|
| UNIPROTKB|P51913 ENO1 "Alpha-enolase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 198/296 (66%), Positives = 234/296 (79%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I KIHAR+IFDSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRDNDK Y GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTNKGLFRAAVPSGASTGIYEALELRDNDKTRYLGK 60
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAIXXXXXXXXX 120
GV+KAV +N IAPAL+ ++ V +Q++ID+ M+++DGTENKSKFGANAI
Sbjct: 61 GVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLEMDGTENKSKFGANAILGVSLAVCK 120
Query: 121 XXXXXXXXXXYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
Y+H+ADLAGN +ILPVPAFNVINGGSHAGNKLAMQEFMILP GA +F E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADTFKE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
AM+IG+EVYH+LK VI K+G DAT VGDEGGFAPNIL+NKE L L+ AI KAGY+ KV
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAIGKAGYSDKV 240
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
IGMDVAASEF+++G+YDLDFK+P+ D S+++ D+L LY F+K YP+VSIEDP
Sbjct: 241 VIGMDVAASEFYRDGKYDLDFKSPD-DPSRYISPDQLADLYLGFVKNYPVVSIEDP 295
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O02654 | ENO_DORPE | 4, ., 2, ., 1, ., 1, 1 | 0.7094 | 0.9899 | 0.6820 | N/A | N/A |
| Q9PVK2 | ENOA_ALLMI | 4, ., 2, ., 1, ., 1, 1 | 0.7171 | 0.9899 | 0.6820 | N/A | N/A |
| P42897 | ENO_ALLMI | 4, ., 2, ., 1, ., 1, 1 | 0.7080 | 0.9130 | 0.6911 | N/A | N/A |
| P19140 | ENOA_ANAPL | 4, ., 2, ., 1, ., 1, 1 | 0.7239 | 0.9899 | 0.6820 | N/A | N/A |
| P42894 | ENO_NEOFR | 4, ., 2, ., 1, ., 1, 1 | 0.7239 | 0.9899 | 0.6788 | N/A | N/A |
| P06733 | ENOA_HUMAN | 4, ., 2, ., 1, ., 1, 1 | 0.7474 | 0.9899 | 0.6820 | yes | N/A |
| P15429 | ENOB_RAT | 4, ., 2, ., 1, ., 1, 1 | 0.7138 | 0.9899 | 0.6820 | no | N/A |
| P25704 | ENOB_RABIT | 4, ., 2, ., 1, ., 1, 1 | 0.7162 | 0.9866 | 0.6797 | no | N/A |
| Q6BI20 | ENO2_DEBHA | 4, ., 2, ., 1, ., 1, 1 | 0.6421 | 0.9933 | 0.6765 | yes | N/A |
| P15007 | ENO_DROME | 4, ., 2, ., 1, ., 1, 1 | 0.8215 | 0.9933 | 0.594 | yes | N/A |
| P00924 | ENO1_YEAST | 4, ., 2, ., 1, ., 1, 1 | 0.6254 | 0.9933 | 0.6796 | yes | N/A |
| Q27527 | ENO_CAEEL | 4, ., 2, ., 1, ., 1, 1 | 0.7593 | 0.9866 | 0.6797 | yes | N/A |
| Q70CP7 | ENO_KLULA | 4, ., 2, ., 1, ., 1, 1 | 0.6354 | 0.9933 | 0.6796 | yes | N/A |
| P17183 | ENOG_MOUSE | 4, ., 2, ., 1, ., 1, 1 | 0.7094 | 0.9866 | 0.6797 | no | N/A |
| O74286 | ENO_CUNEL | 4, ., 2, ., 1, ., 1, 1 | 0.7176 | 0.9799 | 0.6720 | N/A | N/A |
| P17182 | ENOA_MOUSE | 4, ., 2, ., 1, ., 1, 1 | 0.7205 | 0.9899 | 0.6820 | yes | N/A |
| Q3ZC09 | ENOB_BOVIN | 4, ., 2, ., 1, ., 1, 1 | 0.7195 | 0.9866 | 0.6797 | no | N/A |
| Q1KYT0 | ENOB_PIG | 4, ., 2, ., 1, ., 1, 1 | 0.7195 | 0.9866 | 0.6797 | no | N/A |
| Q5R6Y1 | ENOA_PONAB | 4, ., 2, ., 1, ., 1, 1 | 0.7474 | 0.9899 | 0.6820 | yes | N/A |
| P09104 | ENOG_HUMAN | 4, ., 2, ., 1, ., 1, 1 | 0.7094 | 0.9866 | 0.6797 | no | N/A |
| O57391 | ENOG_CHICK | 4, ., 2, ., 1, ., 1, 1 | 0.7027 | 0.9866 | 0.6797 | no | N/A |
| P33676 | ENO_SCHJA | 4, ., 2, ., 1, ., 1, 1 | 0.7094 | 0.9899 | 0.6820 | N/A | N/A |
| Q12560 | ENO_ASPOR | 4, ., 2, ., 1, ., 1, 1 | 0.6266 | 0.9933 | 0.6780 | yes | N/A |
| P56252 | ENO_HOMGA | 4, ., 2, ., 1, ., 1, 1 | 0.7186 | 0.9832 | 0.6789 | N/A | N/A |
| P04764 | ENOA_RAT | 4, ., 2, ., 1, ., 1, 1 | 0.7340 | 0.9899 | 0.6820 | yes | N/A |
| P51913 | ENOA_CHICK | 4, ., 2, ., 1, ., 1, 1 | 0.7239 | 0.9899 | 0.6820 | yes | N/A |
| P13929 | ENOB_HUMAN | 4, ., 2, ., 1, ., 1, 1 | 0.7229 | 0.9866 | 0.6797 | no | N/A |
| P07323 | ENOG_RAT | 4, ., 2, ., 1, ., 1, 1 | 0.7128 | 0.9866 | 0.6797 | no | N/A |
| Q9XSJ4 | ENOA_BOVIN | 4, ., 2, ., 1, ., 1, 1 | 0.7239 | 0.9899 | 0.6820 | yes | N/A |
| Q9W7L2 | ENOA_SCEUN | 4, ., 2, ., 1, ., 1, 1 | 0.7171 | 0.9899 | 0.6820 | N/A | N/A |
| Q9W7L0 | ENOA_PYTRG | 4, ., 2, ., 1, ., 1, 1 | 0.7037 | 0.9899 | 0.6820 | N/A | N/A |
| Q9W7L1 | ENOA_TRASC | 4, ., 2, ., 1, ., 1, 1 | 0.7205 | 0.9899 | 0.6820 | N/A | N/A |
| Q4R5L2 | ENOA_MACFA | 4, ., 2, ., 1, ., 1, 1 | 0.7441 | 0.9899 | 0.6820 | N/A | N/A |
| Q9C9C4 | ENO1_ARATH | 4, ., 2, ., 1, ., 1, 1 | 0.6576 | 0.9732 | 0.6100 | yes | N/A |
| P08734 | ENOA_XENLA | 4, ., 2, ., 1, ., 1, 1 | 0.7104 | 0.9899 | 0.6820 | N/A | N/A |
| P21550 | ENOB_MOUSE | 4, ., 2, ., 1, ., 1, 1 | 0.7162 | 0.9866 | 0.6797 | no | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| PLN00191 | 457 | PLN00191, PLN00191, enolase | 0.0 | |
| cd03313 | 408 | cd03313, enolase, Enolase: Enolases are homodimeri | 1e-180 | |
| PTZ00081 | 439 | PTZ00081, PTZ00081, enolase; Provisional | 1e-178 | |
| PRK00077 | 425 | PRK00077, eno, enolase; Provisional | 1e-155 | |
| COG0148 | 423 | COG0148, Eno, Enolase [Carbohydrate transport and | 1e-134 | |
| TIGR01060 | 425 | TIGR01060, eno, phosphopyruvate hydratase | 1e-126 | |
| pfam00113 | 296 | pfam00113, Enolase_C, Enolase, C-terminal TIM barr | 2e-97 | |
| pfam03952 | 132 | pfam03952, Enolase_N, Enolase, N-terminal domain | 3e-78 | |
| PRK08350 | 341 | PRK08350, PRK08350, hypothetical protein; Provisio | 3e-14 |
| >gnl|CDD|215095 PLN00191, PLN00191, enolase | Back alignment and domain information |
|---|
Score = 516 bits (1330), Expect = 0.0
Identities = 215/295 (72%), Positives = 242/295 (82%), Gaps = 4/295 (1%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
I+K+ ARQI DSRGNPTVEVDL T G+FRAAVPSGASTGIYEALELRD DK Y GKGV
Sbjct: 28 ITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALELRDGDKD-YLGKGV 86
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
KAV +N IAPAL+ + T Q +ID FM++LDGT NK K GANAIL VSLAV KAG
Sbjct: 87 LKAVKNVNEIIAPALI--GMDPTDQTQIDNFMLELDGTPNKGKLGANAILAVSLAVCKAG 144
Query: 123 AAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAM 182
AA+KGVPLYKH+ADLAGN ++LPVPAFNVINGGSHAGNKLAMQEFMILP GASSF EAM
Sbjct: 145 AAEKGVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAM 204
Query: 183 KIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEI 242
++GSEVYHHLK VI K+G DA VGDEGGFAPNI DNKEGL L+ EAIEKAGYTGK++I
Sbjct: 205 QMGSEVYHHLKAVIKKKYGQDACNVGDEGGFAPNIQDNKEGLELLKEAIEKAGYTGKIKI 264
Query: 243 GMDVAASEFF-KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
GMDVAASEF+ K+ +YDLDFK N+D S D+L LY+EF+ +YPIVSIEDP
Sbjct: 265 GMDVAASEFYTKDKKYDLDFKEENNDGSNKKSGDELIDLYKEFVSDYPIVSIEDP 319
|
Length = 457 |
| >gnl|CDD|239429 cd03313, enolase, Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways | Back alignment and domain information |
|---|
Score = 503 bits (1297), Expect = e-180
Identities = 186/296 (62%), Positives = 226/296 (76%), Gaps = 13/296 (4%)
Query: 5 KIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63
KI AR+I DSRGNPTVEV++TTE G + RAAVPSGASTG +EA+ELRD DK+ Y GKGV
Sbjct: 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVL 60
Query: 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGA 123
KAV +N IAPAL+ +VT Q+ ID+ +I+LDGT NKSK GANAILGVSLAVAKA A
Sbjct: 61 KAVKNVNEIIAPALIG--MDVTDQRAIDKLLIELDGTPNKSKLGANAILGVSLAVAKAAA 118
Query: 124 AKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMK 183
A G+PLY++L LA +LPVP FNVINGG+HAGNKL QEFMI+P GA SFSEA++
Sbjct: 119 AALGLPLYRYLGGLA---AYVLPVPMFNVINGGAHAGNKLDFQEFMIVPVGAPSFSEALR 175
Query: 184 IGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG--KVE 241
+G+EVYH LKKV+ K GL AT VGDEGGFAPN+ N+E L L+VEAIEKAGY K+
Sbjct: 176 MGAEVYHTLKKVLKKKGGLLATNVGDEGGFAPNLSSNEEALDLLVEAIEKAGYEPGKKIA 235
Query: 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
I +DVAASEF+ EG+Y D SD+ + L +++L Y+E +K+YPIVSIEDP
Sbjct: 236 IALDVAASEFYDEGKYVYD-----SDEGKKLTSEELIDYYKELVKKYPIVSIEDPF 286
|
The reaction is facilitated by the presence of metal ions. Length = 408 |
| >gnl|CDD|240259 PTZ00081, PTZ00081, enolase; Provisional | Back alignment and domain information |
|---|
Score = 498 bits (1285), Expect = e-178
Identities = 204/306 (66%), Positives = 238/306 (77%), Gaps = 12/306 (3%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
I I AR+I DSRGNPTVEVDLTTE G+FRAAVPSGASTGIYEALELRD DK+ Y GK
Sbjct: 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTEN-----KSKFGANAILGV 114
GV KAV +N IAPAL+ +VT QK++D+ M++ LDGT+N KSK GANAIL V
Sbjct: 62 GVLKAVENVNEIIAPALI--GKDVTDQKKLDKLMVEQLDGTKNEWGWCKSKLGANAILAV 119
Query: 115 SLAVAKAGAAKKGVPLYKHLADLAGN--SNIILPVPAFNVINGGSHAGNKLAMQEFMILP 172
S+AVA+A AA KGVPLYK+LA LAG +LPVP FNVINGG HAGNKLA QEFMI P
Sbjct: 120 SMAVARAAAAAKGVPLYKYLAQLAGKPTDKFVLPVPCFNVINGGKHAGNKLAFQEFMIAP 179
Query: 173 TGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIE 232
GA SF EA+++G+EVYH LK VI K+GLDAT VGDEGGFAPNI D +E L L+VEAI+
Sbjct: 180 VGAPSFKEALRMGAEVYHSLKSVIKKKYGLDATNVGDEGGFAPNIKDPEEALDLLVEAIK 239
Query: 233 KAGYTGKVEIGMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPI 290
KAGY GKV+I MDVAASEF+ ++ YDLDFKNPN+DKS L ++L LY + +K+YPI
Sbjct: 240 KAGYEGKVKICMDVAASEFYDKEKKVYDLDFKNPNNDKSNKLTGEELVELYLDLVKKYPI 299
Query: 291 VSIEDP 296
VSIEDP
Sbjct: 300 VSIEDP 305
|
Length = 439 |
| >gnl|CDD|234617 PRK00077, eno, enolase; Provisional | Back alignment and domain information |
|---|
Score = 440 bits (1135), Expect = e-155
Identities = 168/300 (56%), Positives = 214/300 (71%), Gaps = 18/300 (6%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHG 59
I I AR+I DSRGNPTVEV++T E G F RAAVPSGASTG EA+ELRD DK+ Y G
Sbjct: 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLG 61
Query: 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVA 119
KGV KAV +N +IAPAL+ + Q+ ID+ MI+LDGT NKSK GANAILGVSLAVA
Sbjct: 62 KGVLKAVENVNEEIAPALI--GLDALDQRAIDKAMIELDGTPNKSKLGANAILGVSLAVA 119
Query: 120 KAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFS 179
KA A G+PLY++L G + +LPVP N+INGG+HA N + +QEFMI+P GA SF
Sbjct: 120 KAAADSLGLPLYRYLG---GPNAKVLPVPMMNIINGGAHADNNVDIQEFMIMPVGAPSFK 176
Query: 180 EAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239
EA+++G+EV+H LKKV+ K GL +TAVGDEGGFAPN+ N+E L LI+EAIEKAGY
Sbjct: 177 EALRMGAEVFHTLKKVLKEK-GL-STAVGDEGGFAPNLKSNEEALDLILEAIEKAGYKPG 234
Query: 240 VEI--GMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+I +D AASEF+K+G+Y L+ + L ++++ E + +YPIVSIED +
Sbjct: 235 EDIALALDCAASEFYKDGKYVLEGEG--------LTSEEMIDYLAELVDKYPIVSIEDGL 286
|
Length = 425 |
| >gnl|CDD|223226 COG0148, Eno, Enolase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 387 bits (996), Expect = e-134
Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 19/299 (6%)
Query: 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGK 60
I + AR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD D Y GK
Sbjct: 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGDSR-YLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV +N IAPAL+ + T Q ID +I+LDGTENKSK GANAILGVSLAVAK
Sbjct: 62 GVLKAVANVNEIIAPALIG--LDATDQALIDSLLIELDGTENKSKLGANAILGVSLAVAK 119
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
A AA G+PLY++L G + ++LPVP NVINGG+HA N L +QEFMI+P GA SF E
Sbjct: 120 AAAASLGIPLYRYLG---GLNALVLPVPMMNVINGGAHADNNLDIQEFMIMPVGAESFKE 176
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
A++ G+EV+HHLKK++ K +T VGDEGGFAPN+ N+E L ++VEAIE+AGY
Sbjct: 177 ALRAGAEVFHHLKKLLKEKG--LSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGE 234
Query: 241 EI--GMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+I +DVAASEF+K+G+Y L+ + L +++L Y E +K+YPIVSIEDP+
Sbjct: 235 DIALALDVAASEFYKDGKYVLEGE--------SLTSEELIEYYLELVKKYPIVSIEDPL 285
|
Length = 423 |
| >gnl|CDD|213580 TIGR01060, eno, phosphopyruvate hydratase | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-126
Identities = 164/300 (54%), Positives = 210/300 (70%), Gaps = 18/300 (6%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I I AR+I DSRGNPTVEV++ E G F RAAVPSGASTG EALELRD DK Y GKG
Sbjct: 1 IVDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKG 60
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IAP L + T Q+EID+ +I+LDGT NKSK GANAILGVS+AVAKA
Sbjct: 61 VLKAVENVNEIIAPEL--IGMDATDQREIDQILIELDGTPNKSKLGANAILGVSMAVAKA 118
Query: 122 GAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEA 181
A G+PLY++L G + +LPVP N+INGG+HA N L QEFMI+P GA SF EA
Sbjct: 119 AADSLGLPLYRYLG---GFNAYVLPVPMMNIINGGAHADNNLDFQEFMIMPVGAPSFREA 175
Query: 182 MKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVE 241
+++G+EV+H LKK++ K GL AT VGDEGGFAPN+ N+E L +IVEAIEKAGY +
Sbjct: 176 LRMGAEVFHALKKLLKEK-GL-ATGVGDEGGFAPNLASNEEALEIIVEAIEKAGYKPGED 233
Query: 242 I--GMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ +D AASEF+ ++G+Y +N ++++ Y+E +++YPI+SIED +
Sbjct: 234 VALALDCAASEFYDEEDGKYVYKGENKQLT------SEEMIEYYEELVEKYPIISIEDGL 287
|
Alternate name: enolase [Energy metabolism, Glycolysis/gluconeogenesis]. Length = 425 |
| >gnl|CDD|109180 pfam00113, Enolase_C, Enolase, C-terminal TIM barrel domain | Back alignment and domain information |
|---|
Score = 288 bits (739), Expect = 2e-97
Identities = 119/156 (76%), Positives = 135/156 (86%), Gaps = 2/156 (1%)
Query: 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL 202
+LPVP NVINGGSHAGNKLAMQEFMILPTGASSF+EAM++GSEVYH+LK VI K+G
Sbjct: 2 YVLPVPMMNVINGGSHAGNKLAMQEFMILPTGASSFTEAMRMGSEVYHNLKSVIKAKYGQ 61
Query: 203 DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFF--KEGQYDLD 260
DAT VGDEGGFAPNI NKE L LIVEAIEKAGYTGKV+I MDVA+SEF+ K+G+YDLD
Sbjct: 62 DATNVGDEGGFAPNIQSNKEALDLIVEAIEKAGYTGKVKIAMDVASSEFYNKKDGKYDLD 121
Query: 261 FKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
FKNP SD S+WL +D+L LY+E IK+YPIVSIEDP
Sbjct: 122 FKNPKSDPSKWLTSDQLADLYKELIKKYPIVSIEDP 157
|
Length = 296 |
| >gnl|CDD|202827 pfam03952, Enolase_N, Enolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 3e-78
Identities = 86/133 (64%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I+KIHAR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD DK+ Y GKG
Sbjct: 2 ITKIHAREILDSRGNPTVEVEVTLEDGTFGRAAVPSGASTGSHEAVELRDGDKSRYGGKG 61
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IAPAL+ + Q+ ID+ +I+LDGT NKSK GANAIL VSLAVAKA
Sbjct: 62 VLKAVENVNEIIAPALIG--MDARDQRAIDKTLIELDGTPNKSKLGANAILAVSLAVAKA 119
Query: 122 GAAKKGVPLYKHL 134
AA G+PLY++L
Sbjct: 120 AAAALGLPLYRYL 132
|
Length = 132 |
| >gnl|CDD|169397 PRK08350, PRK08350, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 3e-14
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 16 GNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75
G +VEVD+ T+ G R A P + +Y A +AH +AV ++ I P
Sbjct: 17 GKYSVEVDVITDSGFGRFAAPIDENPSLYIA-------EAH-------RAVSEVDEIIGP 62
Query: 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135
L+ F+ ++Q+ ID ++ ++DGTE+ S GAN L VS+AVAKA A K +PLY +
Sbjct: 63 ELI--GFDASEQELIDSYLWEIDGTEDFSHIGANTALAVSVAVAKAAANSKNMPLYSY-- 118
Query: 136 DLAGNSNIILPVP 148
+ G LPVP
Sbjct: 119 -IGGTFTTELPVP 130
|
Length = 341 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| KOG2670|consensus | 433 | 100.0 | ||
| COG0148 | 423 | Eno Enolase [Carbohydrate transport and metabolism | 100.0 | |
| PTZ00081 | 439 | enolase; Provisional | 100.0 | |
| PLN00191 | 457 | enolase | 100.0 | |
| PTZ00378 | 518 | hypothetical protein; Provisional | 100.0 | |
| cd03313 | 408 | enolase Enolase: Enolases are homodimeric enzymes | 100.0 | |
| PRK00077 | 425 | eno enolase; Provisional | 100.0 | |
| TIGR01060 | 425 | eno phosphopyruvate hydratase. Alternate name: eno | 100.0 | |
| PRK08350 | 341 | hypothetical protein; Provisional | 100.0 | |
| PF00113 | 295 | Enolase_C: Enolase, C-terminal TIM barrel domain; | 100.0 | |
| PF03952 | 132 | Enolase_N: Enolase, N-terminal domain; InterPro: I | 100.0 | |
| cd03321 | 355 | mandelate_racemase Mandelate racemase (MR) catalyz | 99.02 | |
| cd03327 | 341 | MR_like_2 Mandelate racemase (MR)-like subfamily o | 98.93 | |
| TIGR01502 | 408 | B_methylAsp_ase methylaspartate ammonia-lyase. Thi | 98.77 | |
| PRK15072 | 404 | bifunctional D-altronate/D-mannonate dehydratase; | 98.76 | |
| cd03325 | 352 | D-galactonate_dehydratase D-galactonate dehydratas | 98.69 | |
| cd03314 | 369 | MAL Methylaspartate ammonia lyase (3-methylasparta | 98.63 | |
| cd03317 | 354 | NAAAR N-acylamino acid racemase (NAAAR), an octame | 98.61 | |
| PRK14017 | 382 | galactonate dehydratase; Provisional | 98.54 | |
| cd03316 | 357 | MR_like Mandelate racemase (MR)-like subfamily of | 98.52 | |
| cd03322 | 361 | rpsA The starvation sensing protein RpsA from E.co | 98.51 | |
| cd03329 | 368 | MR_like_4 Mandelate racemase (MR)-like subfamily o | 98.42 | |
| TIGR02534 | 368 | mucon_cyclo muconate and chloromuconate cycloisome | 98.34 | |
| PRK15440 | 394 | L-rhamnonate dehydratase; Provisional | 98.31 | |
| cd03318 | 365 | MLE Muconate Lactonizing Enzyme (MLE), an homoocta | 98.25 | |
| cd03328 | 352 | MR_like_3 Mandelate racemase (MR)-like subfamily o | 98.23 | |
| COG4948 | 372 | L-alanine-DL-glutamate epimerase and related enzym | 98.11 | |
| cd03319 | 316 | L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat | 98.1 | |
| TIGR01928 | 324 | menC_lowGC/arch o-succinylbenzoic acid (OSB) synth | 98.06 | |
| cd03324 | 415 | rTSbeta_L-fuconate_dehydratase Human rTS beta is e | 97.98 | |
| cd03326 | 385 | MR_like_1 Mandelate racemase (MR)-like subfamily o | 97.88 | |
| TIGR03247 | 441 | glucar-dehydr glucarate dehydratase. Glucarate deh | 97.79 | |
| cd03323 | 395 | D-glucarate_dehydratase D-Glucarate dehydratase (G | 97.66 | |
| PF02746 | 117 | MR_MLE_N: Mandelate racemase / muconate lactonizin | 97.55 | |
| cd00308 | 229 | enolase_like Enolase-superfamily, characterized by | 97.36 | |
| PRK15129 | 321 | L-Ala-D/L-Glu epimerase; Provisional | 96.7 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 96.66 | |
| PRK05105 | 322 | O-succinylbenzoate synthase; Provisional | 95.1 | |
| cd03315 | 265 | MLE_like Muconate lactonizing enzyme (MLE) like su | 94.97 | |
| PF05034 | 159 | MAAL_N: Methylaspartate ammonia-lyase N-terminus; | 94.6 | |
| COG3799 | 410 | Mal Methylaspartate ammonia-lyase [Amino acid tran | 90.91 |
| >KOG2670|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-114 Score=804.05 Aligned_cols=299 Identities=77% Similarity=1.185 Sum_probs=294.2
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|.|.+|+|||||||||||||||+++|+.|++||+||||||||.|||+||||+|+++|.||||.+||.|||+.|+|+|+++
T Consensus 1 m~~~kv~aR~I~dSRGnPTVEVdL~T~~G~fRaavPSGAStGi~EAlELrDgdK~~y~GkgV~kaV~niN~~i~pali~~ 80 (433)
T KOG2670|consen 1 MSIIKVKARQIYDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSKYMGKGVLKAVGNINNTIAPALIKK 80 (433)
T ss_pred CCceeeehhhhhhcCCCCceeEEEEecCcceEeecCCCCccchhhhhheecCCcceecchhHHHHHHHHHHHHHHHHHcc
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC-ccccccceEEeecCCcCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS-NIILPVPAFNVINGGSHA 159 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~-~~~lP~P~~nvinGG~ha 159 (299)
++++++|+.||++|++||||+|||++||||||+||||+|||+|..+++|||+||+++.|.. ++.||||.|||||||.||
T Consensus 81 ~~dv~~Q~~iD~~mi~LDGTeNKsklGaNaIlgvSlavckagAa~k~vplykhia~lag~~~~~vlPVPaFNVlNGGsHA 160 (433)
T KOG2670|consen 81 NLDVTDQKAIDNFMIELDGTENKSKLGANAILGVSLAVCKAGAAEKGVPLYKHIADLAGNKQPYVLPVPAFNVLNGGSHA 160 (433)
T ss_pred CCChhhHHHHHHHHHhccCCcccccccchhhHHHHHHHHhhhhhhcCCcHHHHHHHhcCCCCceEecccceeeecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999987 689999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~ 239 (299)
+|+|.+|||||+|+|+.||+|+|||++||||+||.++++|||...|+|||||||||++.+++|+|+||.+||++|||+++
T Consensus 161 Gn~lAmQEfMIlP~ga~sf~eamr~GsevYh~LK~vik~kyG~~a~nVGDEGGfAPnI~~~~E~L~Li~~Ai~kagyt~k 240 (433)
T KOG2670|consen 161 GNKLAMQEFMILPVGADSFAEAMRMGSEVYHHLKSVIKEKYGADATNVGDEGGFAPNIQTNEEALDLIKEAINKAGYTGK 240 (433)
T ss_pred cchhhhhhheecccCchhHHHHHHHhHHHHHHHHHHHHHHhCccccccccccCcCCCccchHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
|.||+|+|||+||.+|||+++||+|++++.+++|.++|.|+|.+++++|||+||||||+|
T Consensus 241 ikIgmDvAaseF~~dgkYDLdfk~~~~d~s~~~s~~~L~dlY~~~~k~yPivSiEDPFdq 300 (433)
T KOG2670|consen 241 VKIGMDVAASEFYKDGKYDLDFKSPNSDPSRWLSGDQLADLYKSFIKDYPIVSIEDPFDQ 300 (433)
T ss_pred eEEEEeechhhhhcCCcccccCcCCCCCcccccCHHHHHHHHHHHHhcCCeeeecCCcch
Confidence 999999999999999999999999988999999999999999999999999999999997
|
|
| >COG0148 Eno Enolase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-107 Score=774.27 Aligned_cols=282 Identities=60% Similarity=0.957 Sum_probs=274.0
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|++|+||||||||||||+|+|++|.+ ||+||||||||.+||+|+||+| +||.||||++||++||++|+|+|+
T Consensus 3 ~I~~i~aReIlDSRGnpTVEveV~~~~g~~g~a~vPSGAStG~~EavElrdgd-~ry~gkGV~~AV~nVn~~Iap~Li-- 79 (423)
T COG0148 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGD-SRYLGKGVLKAVANVNEIIAPALI-- 79 (423)
T ss_pred ccceeEEEEEEcCCCCceEEEEEEEcCCCcceeecCCCCCCCCceeEEecCCc-cccccccHHHHHHHHHHHHHHHHc--
Confidence 499999999999999999999999999988 9999999999999999999999 799999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|++||..||++|++||||+|||+||+|+|||||||+|||||+++++|||+||+ |...++||+|||||||||+||+
T Consensus 80 G~da~dQ~~ID~~lielDGT~Nks~lGaNailgVSlAvAkAAA~~l~~PLy~YlG---G~~a~~lPvPm~NvinGG~HA~ 156 (423)
T COG0148 80 GLDATDQALIDSLLIELDGTENKSKLGANAILGVSLAVAKAAAASLGIPLYRYLG---GLNALVLPVPMMNVINGGAHAD 156 (423)
T ss_pred CCCcccHHHHHHHHHHccCCCcccccccHHHHHHHHHHHHHHHHhcCCcHHHHhc---CccccccccceeeeecccccCC
Confidence 7999999999999999999999999999999999999999999999999999999 8888999999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--c
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT--G 238 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~--~ 238 (299)
|.+|||||||+|.|++||.|++||+++|||+|+++|+++ |. .|+|||||||+|+++++++|||+|.+||+++||+ .
T Consensus 157 n~~d~QEFmI~p~ga~sf~ealr~~~ev~h~lk~~l~~~-g~-~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~ 234 (423)
T COG0148 157 NNLDIQEFMIMPVGAESFKEALRAGAEVFHHLKKLLKEK-GL-STGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGE 234 (423)
T ss_pred CCccceeEEEeecChHHHHHHHHHHHHHHHHHHHHHhhc-Cc-cccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999999999999999999999987 87 6779999999999999999999999999999999 4
Q ss_pred ceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 239 KVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 239 ~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+|++||||||||||++|+|+|+ +..+|++||+|||.+|+++|||+||||||+|
T Consensus 235 ~i~~alD~Aasefy~~~~Y~~~--------~~~~~~~e~i~~~~~Lv~~YpivsiEDpl~E 287 (423)
T COG0148 235 DIALALDVAASEFYKDGKYVLE--------GESLTSEELIEYYLELVKKYPIVSIEDPLSE 287 (423)
T ss_pred ceeeeehhhhhhhccCCeeeec--------CcccCHHHHHHHHHHHHHhCCEEEEcCCCCc
Confidence 6999999999999999999993 3489999999999999999999999999997
|
|
| >PTZ00081 enolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-98 Score=735.91 Aligned_cols=297 Identities=69% Similarity=1.048 Sum_probs=282.2
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|+|++|++|+||||||||||||+|+|++|.+||+||||||||.+||+||||+|+.||+||||.+||++||+.|+|+|+
T Consensus 2 ~~I~~v~~r~i~dSrg~ptvev~v~~~~G~~~a~~psgastG~~Ea~elrd~~~~~y~g~gv~~Av~~v~~~i~~~Li-- 79 (439)
T PTZ00081 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVENVNEIIAPALI-- 79 (439)
T ss_pred cEEEEEEEEEEecCCCCceEEEEEEECCCCEEEecccCCCCceeeEeeccCCCccccCCccHHHHHHHHHHHHHHHHc--
Confidence 679999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHh-hcCCCC-----cccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC--CccccccceEEe
Q psy12655 81 SFEVTQQKEIDEFMIK-LDGTEN-----KSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN--SNIILPVPAFNV 152 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~-lDgT~n-----ks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~--~~~~lP~P~~nv 152 (299)
|+++.||++||++|++ ||||+| ||+||+|||+|||||+|||+|+.+++|||+||+++.|. .+++||+||+||
T Consensus 80 G~d~~dq~~iD~~l~~~ldgt~n~~~~~ks~lGanailavS~A~a~AaA~~~~~PLy~yL~~~~g~~~~~~~lP~P~~ni 159 (439)
T PTZ00081 80 GKDVTDQKKLDKLMVEQLDGTKNEWGWCKSKLGANAILAVSMAVARAAAAAKGVPLYKYLAQLAGKPTDKFVLPVPCFNV 159 (439)
T ss_pred CCChhhHHHHHHHHHHhccCCcccccccccccchHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCCccCCccccceeEEe
Confidence 8999999999999999 999999 99999999999999999999999999999999766564 467899999999
Q ss_pred ecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHH
Q psy12655 153 INGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIE 232 (299)
Q Consensus 153 inGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~ 232 (299)
||||+|++|+++||||||+|.++.+|.|++||+++|||+|+++|+++||..+++|||||||+|++++++++|++|++||+
T Consensus 160 inGG~ha~~~~~~qefmi~P~ga~s~~ea~~~~~ev~~~l~~il~~~~g~~~~~vgdeGgfap~~~~~eeal~ll~eAi~ 239 (439)
T PTZ00081 160 INGGKHAGNKLAFQEFMIAPVGAPSFKEALRMGAEVYHSLKSVIKKKYGLDATNVGDEGGFAPNIKDPEEALDLLVEAIK 239 (439)
T ss_pred ccCcccccccccceEEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCcCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998679999999999999999999999999999
Q ss_pred HcccccceEEEeecccccccc--CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 233 KAGYTGKVEIGMDVAASEFFK--EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 233 ~ag~~~~i~ialD~AAse~~~--~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++||+++|.||||||||+||+ +++|+++|+.|.+..++.+|++||+|||.+|+++|||++|||||++
T Consensus 240 ~ag~~~~v~i~lD~Aase~~~~~~~~Y~~~f~~~~~~~~~~~s~~eli~~~~~~l~~y~I~~IEDPl~~ 308 (439)
T PTZ00081 240 KAGYEGKVKICMDVAASEFYDKEKKVYDLDFKNPNNDKSNKLTGEELVELYLDLVKKYPIVSIEDPFDQ 308 (439)
T ss_pred HcCCcCceEEEEehhhhhhhhccCCceeeeeccccCccccccCHHHHHHHHHHHHhcCCcEEEEcCCCc
Confidence 999998899999999999994 6899998876532334568999999999999999999999999975
|
|
| >PLN00191 enolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-97 Score=733.52 Aligned_cols=296 Identities=72% Similarity=1.101 Sum_probs=281.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|+|++|++|+||||||||||||+|+|++|.+||+||||||||.+||+|+||+|++ |+||||++||++||+.|+|+|+
T Consensus 26 ~~I~~v~~r~ildsrG~PtVeveV~~~~G~~~a~~psgastG~~Ea~elrd~~~~-~~g~gv~~Av~~v~~~ia~~Li-- 102 (457)
T PLN00191 26 ATITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALELRDGDKD-YLGKGVLKAVKNVNEIIAPALI-- 102 (457)
T ss_pred CeeeEEEEEEEEcCCCCeEEEEEEEECCCCEEEEeccCCCCCcceeeeccCCCcc-cCCccHHHHHHHHHHHHHHHHc--
Confidence 4699999999999999999999999999988999999999999999999999987 9999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+++.||++||++|+++|||+||++||+|||+|||||+|||+|+.+++|||+||+++.|....+||+||+||||||+|++
T Consensus 103 G~~~~dq~~iD~~l~~ldgt~nk~~lGanailavS~A~a~AaA~~~~~PLy~~l~~~gg~~~~~lP~p~~niinGG~ha~ 182 (457)
T PLN00191 103 GMDPTDQTQIDNFMLELDGTPNKGKLGANAILAVSLAVCKAGAAEKGVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAG 182 (457)
T ss_pred CCChhhHHHHHHHHHHccCCCCccccchhHHHHHHHHHHHHHHHHcCCcHHHHHHhhCCCCCccccceeEEeecCccccc
Confidence 89999999999999999999999999999999999999999999999999999977657667799999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccce
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i 240 (299)
|+++||||||+|.++.||+|++||+++|||+|+++|++++|..+++|||||||+|++++++|+|++|++||+++||+++|
T Consensus 183 ~~~~~qefmi~P~ga~s~~ea~~~~~ev~~~l~~il~~~~g~~~~~vgdeGg~ap~~~~~~eal~ll~eAi~~ag~~~~i 262 (457)
T PLN00191 183 NKLAMQEFMILPVGASSFKEAMQMGSEVYHHLKAVIKKKYGQDACNVGDEGGFAPNIQDNKEGLELLKEAIEKAGYTGKI 262 (457)
T ss_pred cccchheeeecCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcCccCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCCce
Confidence 99999999999999999999999999999999999999999867999999999999999999999999999999999789
Q ss_pred EEEeecccccccc-CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 241 EIGMDVAASEFFK-EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 241 ~ialD~AAse~~~-~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
.|||||||||||+ +|+|+|.|+.+.+..++.+|++||++||.+|+++|||++|||||++
T Consensus 263 ~i~lD~Aase~~~~~~~Y~~~~~~~~~~~~~~~s~~e~i~~~~~L~~~y~I~~IEDPl~~ 322 (457)
T PLN00191 263 KIGMDVAASEFYTKDKKYDLDFKEENNDGSNKKSGDELIDLYKEFVSDYPIVSIEDPFDQ 322 (457)
T ss_pred EEEeehhhhhhcccCCceEeeccccCCCcccccCHHHHHHHHHHHhhcCCcEEEECCCCc
Confidence 9999999999998 8999998765433344678999999999999999999999999975
|
|
| >PTZ00378 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-92 Score=696.15 Aligned_cols=276 Identities=22% Similarity=0.329 Sum_probs=254.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCccc-c-cCccHHHHHHHHHHhHHHHHh
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAH-Y-HGKGVTKAVGFINNDIAPALL 78 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~-~-~Gkgv~~Av~~in~~i~p~Li 78 (299)
+.|++|++||||||||||||||+|+|.+|.+ |||||||| ||+||||+|+.+ | .||||.+||+ +.|+|+|+
T Consensus 49 ~~I~~i~areIlDSrGnPTVev~v~l~~G~~---vPSGAStG--EA~elRDgd~~~~~g~gkgV~~Av~---~~i~p~Li 120 (518)
T PTZ00378 49 DEIRALVHNEVLSPAGETVLRFTLELLNGME---VSSGALLS--PSHGERDGEADATLDPAEYTTEALQ---NSYFPRLL 120 (518)
T ss_pred CeeeEEEEEEEEcCCCCeeEEEEEEECCCCE---ECCCCccc--ceeeeecCCcccccCCCccHHHHHH---hhhHHHHc
Confidence 3699999999999999999999999999974 99999999 999999999876 8 9999999999 57999999
Q ss_pred cCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC----CccccccceEEeec
Q psy12655 79 KESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN----SNIILPVPAFNVIN 154 (299)
Q Consensus 79 ~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~----~~~~lP~P~~nvin 154 (299)
|++++||++||++|+++|||+||+++|+|+|+|||||+|||||+++++|||+||+.+.+. .++.||+|||||||
T Consensus 121 --g~~~~dQ~~iD~~Li~lDGT~nks~lGaNailavS~A~akAAA~~~~~PLy~yL~~~~~~~~~~~~~~lP~P~~Niin 198 (518)
T PTZ00378 121 --QLGARDQREFDSTLRAALSTSPLANVGSAVQWALSIVASLAAARCRSVPLFQYLRALFGSLTSVETFSMPQLCITFFG 198 (518)
T ss_pred --CCChHhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHcCCCHHHHhhccccccccCCCcccCccceEeec
Confidence 899999999999999999999999999999999999999999999999999999865432 35789999999999
Q ss_pred CCcCCCCcccceeEEEEecCC--CCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCc-CCCCCChHHHHHHHHHHH
Q psy12655 155 GGSHAGNKLAMQEFMILPTGA--SSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGF-APNILDNKEGLRLIVEAI 231 (299)
Q Consensus 155 GG~ha~~~l~iQEfmiiP~ga--~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgf-ap~~~~~e~aL~ll~eAi 231 (299)
||+||+|+++||||||+|.++ .+|+|+|||++||||+|.+ |. .|+||||||| +|+++++||||++|++||
T Consensus 199 GG~HA~n~l~iQEFmI~P~ga~g~s~~ealr~~~evyh~L~~------~~-~t~vGDEGGfaap~~~~~eeAL~li~eAi 271 (518)
T PTZ00378 199 PGNPSTARLALKSVLFSPVMPSGTVLRERMQKIFAAFHHFCQ------SH-NSSVRSDGSLHWDGFANLTDAVKLATEAL 271 (518)
T ss_pred CccCCCCCCCceEEEEeeCCCCCCCHHHHHHHHHHHHHHHhh------cc-cCccCCCcCcCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999988 9999999999999999943 44 6999999999 688999999999999999
Q ss_pred HHcccc--cceEEEeecccccc------------ccC---C---ceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCC--
Q psy12655 232 EKAGYT--GKVEIGMDVAASEF------------FKE---G---QYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYP-- 289 (299)
Q Consensus 232 ~~ag~~--~~i~ialD~AAse~------------~~~---g---~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yP-- 289 (299)
+++||+ .+|+|||||||||| |++ + +|.|. + + ...+|++||+|||++|+++||
T Consensus 272 ~~aGy~pG~dI~iglD~AASef~~~~~~~~~~~~y~~~k~~~e~~Y~l~-~----~-~~~~t~~elieyy~~li~kYP~i 345 (518)
T PTZ00378 272 RAVQLTPGTDVCLGLRMAASTTRVPATAVADGGAWKEAKDDCEVLYSLF-P----G-EPDVTGDQLSEYVREQLQAVPDI 345 (518)
T ss_pred HHhCCCCCCeEEEEEecccccccccccccccchhhccccCCCceeeeec-C----C-CCCCCHHHHHHHHHHHHHHCCCc
Confidence 999999 47999999999999 976 3 57772 2 1 245899999999999999999
Q ss_pred eeEeecCCCC
Q psy12655 290 IVSIEDPMLR 299 (299)
Q Consensus 290 IvsiEDp~~e 299 (299)
|+||||||+|
T Consensus 346 IvsIEDp~~E 355 (518)
T PTZ00378 346 VVYVEDTHCD 355 (518)
T ss_pred eEEEecCCCc
Confidence 9999999997
|
|
| >cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=629.03 Aligned_cols=285 Identities=65% Similarity=0.970 Sum_probs=271.9
Q ss_pred eEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCC
Q psy12655 5 KIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFE 83 (299)
Q Consensus 5 ~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~ 83 (299)
+|++||||||||||||||+|+|++|.+ ||+||||||||+|||+|+||+|+.+|.|+||.+||++||+.|+|+|+ |+|
T Consensus 1 ~v~~r~i~dsrg~ptvev~v~~~~g~~g~a~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~i~~~iap~Li--G~d 78 (408)
T cd03313 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVKNVNEIIAPALI--GMD 78 (408)
T ss_pred CeEEEEEecCCCCceEEEEEEECCCCEEEEeecCCCCCCcceeeecCCCCcccccCCcHHHHHHHHHHHHHHHHc--CCC
Confidence 589999999999999999999999987 99999999999999999999999999999999999999999999999 899
Q ss_pred ccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcc
Q psy12655 84 VTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKL 163 (299)
Q Consensus 84 ~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l 163 (299)
+.||++||++|+++|||+||+++|+||++|||||+|+|+|+.+|+|||+||+ |....+||+|++||||||+|+++++
T Consensus 79 ~~dq~~id~~l~~~dgt~~~~~~G~nAi~avsiAl~da~A~~~g~PLy~~Lg---g~~~~~lpvp~~nvi~GG~ha~~~~ 155 (408)
T cd03313 79 VTDQRAIDKLLIELDGTPNKSKLGANAILGVSLAVAKAAAAALGLPLYRYLG---GLAAYVLPVPMFNVINGGAHAGNKL 155 (408)
T ss_pred hhhHHHHHHHHHHhcCCCcccccchHHHHHHHHHHHHHHHHHcCCcHHHHhc---CCCCcccceeeEEEecCcccccCcc
Confidence 9999999999999999999999999999999999999999999999999999 7666789999999999999999999
Q ss_pred cceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHccccc--ceE
Q psy12655 164 AMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG--KVE 241 (299)
Q Consensus 164 ~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~--~i~ 241 (299)
+||||||+|.++.+|.|+++|+.++||+||++|+++.|..++++||||||+|++++.+++|+++++||+++||+. ||.
T Consensus 156 ~iqe~~i~p~~~~~~~ea~~~~~~~~~~lK~~l~~~~g~~~~~vgdeGg~~p~~~~d~~~l~~i~eAi~~~g~~~G~dv~ 235 (408)
T cd03313 156 DFQEFMIVPVGAPSFSEALRMGAEVYHTLKKVLKKKGGLLATNVGDEGGFAPNLSSNEEALDLLVEAIEKAGYEPGKKIA 235 (408)
T ss_pred ccccccccccCccCHHHHHHHHHHHHHHHHHHHHhhcCccccccccccCcCCCCCChHHHHHHHHHHHHHhcCCCCCeEE
Confidence 999999999999999999999999999999999988776689999999999999999999999999999999993 899
Q ss_pred EEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 242 ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
|+||+|||+||++++|.|.+ ..++.+|++|+++||.+|+++|||.+|||||++
T Consensus 236 i~lD~aas~~~~~~~y~~~~-----~~~~~~t~~eai~~~~~l~e~~~i~~iEdPl~~ 288 (408)
T cd03313 236 IALDVAASEFYDEGKYVYDS-----DEGKKLTSEELIDYYKELVKKYPIVSIEDPFDE 288 (408)
T ss_pred EEEehhhhhhcccCcceecc-----CCCcccCHHHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 99999999999999999841 124678999999999999999999999999974
|
The reaction is facilitated by the presence of metal ions. |
| >PRK00077 eno enolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=617.98 Aligned_cols=284 Identities=59% Similarity=0.929 Sum_probs=272.0
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+||||||||||||+|+|++|.+ ||+||||||||+|||+|+||+|+.+|+||||.+||++||+.|+|+|+
T Consensus 2 ~~I~~v~~r~i~dsrg~ptvev~v~~~~g~~g~a~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~v~~~iap~Li- 80 (425)
T PRK00077 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLGKGVLKAVENVNEEIAPALI- 80 (425)
T ss_pred CeEEEEEEEEEEcCCCCeEEEEEEEECCCCEEEEEEeccCCCCcceeeecCCCCccccCCcCHHHHHHHHHHHHHHHHc-
Confidence 4699999999999999999999999999987 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.||++||+.|.++|||+|++++|+|||+|||||+|+|+|+.+|+|||+||+ |....++|+|++|+||||+|+
T Consensus 81 -G~d~~d~~~id~~l~~ldgt~~~~~~G~nAi~avsiAl~da~ak~~g~PLy~lLG---G~~~~~~pvp~~n~i~GG~ha 156 (425)
T PRK00077 81 -GLDALDQRAIDKAMIELDGTPNKSKLGANAILGVSLAVAKAAADSLGLPLYRYLG---GPNAKVLPVPMMNIINGGAHA 156 (425)
T ss_pred -CCChhhHHHHHHHHHHhhCccccCccchHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCcccccceeEEEEcccccc
Confidence 8999999999999999999999999999999999999999999999999999998 755567999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-- 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~-- 237 (299)
+++++||||||+|.++.+|+|+++++.++|+++|++|+++ |. .+++||||||+|++++++++|++|++||+++||+
T Consensus 157 ~~~~~~qe~~i~p~~~~~~~ea~~~~~~~~~~lK~~l~~~-g~-~~~vGdeGg~~p~~~~~~e~l~~lreAi~~ag~~~G 234 (425)
T PRK00077 157 DNNVDIQEFMIMPVGAPSFKEALRMGAEVFHTLKKVLKEK-GL-STAVGDEGGFAPNLKSNEEALDLILEAIEKAGYKPG 234 (425)
T ss_pred cCchhhhHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHhc-CC-CCcCCCcCCcCCCccchHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999976 75 6899999999999999999999999999999999
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|.|+||||||+||++++|+++ +..+|++|++++|.+|+++|||++|||||++
T Consensus 235 ~di~l~lD~aas~~~~~~~y~~~--------~~~~s~~e~~~~~~~l~e~y~i~~iEdPl~~ 288 (425)
T PRK00077 235 EDIALALDCAASEFYKDGKYVLE--------GEGLTSEEMIDYLAELVDKYPIVSIEDGLDE 288 (425)
T ss_pred CceEEEEehhhhhcccCCeeecc--------CCcCCHHHHHHHHHHHHhhCCcEEEEcCCCC
Confidence 47999999999999999999983 2358999999999999999999999999974
|
|
| >TIGR01060 eno phosphopyruvate hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=608.94 Aligned_cols=284 Identities=58% Similarity=0.937 Sum_probs=271.0
Q ss_pred eeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 3 I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
|++|++||||||||||||||||+|++|.+ ||+||||||||+|||+|+||+|+++|+||||.+||++||+.|+|+|+ |
T Consensus 1 i~~i~~r~i~dsrg~ptvev~v~~~~g~~g~~~~psgas~g~~ea~~~~d~~~~~~~g~~v~~av~~i~~~iap~Li--G 78 (425)
T TIGR01060 1 IKDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKGVLKAVENVNDIIAPALI--G 78 (425)
T ss_pred CcEEEEEEEecCCCCceEEEEEEECCCCEEEEeccCCCCCCcceeeeccCCCccccCCcCHHHHHHHHHHHHHHHHc--C
Confidence 78999999999999999999999999987 99999999999999999999999999999999999999999999999 7
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCC
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGN 161 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~ 161 (299)
+||.||++||+.|.++|+|+|++++|+||++|||||+|+|+|+.+|+|||+||+ |....+||+|++|+||||+|+++
T Consensus 79 ~d~~d~~~id~~l~~~d~t~~~~~~G~nAi~avs~Al~da~ak~~g~Ply~lLG---G~~~~~lPvp~~n~i~GG~~a~~ 155 (425)
T TIGR01060 79 MDAFDQREIDQIMIELDGTPNKSKLGANAILGVSMAVAKAAAKSLGLPLYRYLG---GKNAYVLPVPMMNIINGGAHADN 155 (425)
T ss_pred CCHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCCceeeEEEEeecccccccC
Confidence 999999999999999999999999999999999999999999999999999998 76567899999999999999999
Q ss_pred cccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--cc
Q psy12655 162 KLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT--GK 239 (299)
Q Consensus 162 ~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~--~~ 239 (299)
++++|||||+|.++.+|.|++++++++|++||++|++| |. .+++||||||+|++++++++|+++.+||+++||+ ++
T Consensus 156 ~~~~qe~~i~p~~a~~~~e~~~~~~~g~~~lK~~l~~~-~~-~~~vGdeGg~~p~~~~~~~~l~~~~~ai~~~~~~~G~d 233 (425)
T TIGR01060 156 NLDFQEFMIMPVGAKSFREALRMGAEVFHALKKLLKEK-GL-ATGVGDEGGFAPNLASNEEALEIISEAIEKAGYKPGED 233 (425)
T ss_pred ccCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhc-CC-CCCCCcccccCCCccccHHHHHHHHHHHHHHhhccCCc
Confidence 99999999999999999999999999999999999866 75 6899999999999999999999999999999999 57
Q ss_pred eEEEeecccccccc--CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFK--EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~--~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+.|+||||||+||+ +++|++. ..++.+|++|++++|.+|+++|||++|||||++
T Consensus 234 i~l~lD~aas~~~~~~~~~y~~~------~~~~~~s~~eai~~~~~lle~~~i~~iEdPl~~ 289 (425)
T TIGR01060 234 VALALDCAASEFYDEEDGKYVYK------GENKQLTSEEMIEYYKELVEKYPIVSIEDGLSE 289 (425)
T ss_pred eEEEEEccccccccccCceeeec------CcccccCHHHHHHHHHHHHhcCCcEEEEcCCCc
Confidence 99999999999998 7899993 334568999999999999999999999999974
|
Alternate name: enolase |
| >PRK08350 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-74 Score=540.96 Aligned_cols=217 Identities=31% Similarity=0.489 Sum_probs=203.6
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
+|.+|+|||||||||||||||||+|++|+.||+||| |+|+.||+ |||.+||++||+.|+|+|+ |
T Consensus 3 ~I~~i~aReIlDSRGnPTVEveV~~~~g~gra~vPS-------------D~d~~ry~-~gV~~AV~nVn~~Iap~Li--G 66 (341)
T PRK08350 3 VIENIIGRVAVLRGGKYSVEVDVITDSGFGRFAAPI-------------DENPSLYI-AEAHRAVSEVDEIIGPELI--G 66 (341)
T ss_pred eeEEEEEEEEEcCCCCceEEEEEEECCcEEEEEecC-------------CCCccccc-chHHHHHHHHHHHHHHHHc--C
Confidence 599999999999999999999999999944999999 67777999 9999999999999999999 8
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCC
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGN 161 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~ 161 (299)
++++||++||++|++||||+|||+||+|||||||||+|||||+++++|||+||+ |.....||+|||||||||
T Consensus 67 ~d~~dQ~~ID~~mielDGT~nKs~lGaNAiLavS~A~akAaA~~~~~PLy~ylg---g~~~~~lPvP~~NiiNGG----- 138 (341)
T PRK08350 67 FDASEQELIDSYLWEIDGTEDFSHIGANTALAVSVAVAKAAANSKNMPLYSYIG---GTFTTELPVPILEFAEDE----- 138 (341)
T ss_pred CCHHHHHHHHHHHHhccCCccccccCchhhHHHHHHHHHHHHHHcCCcHHHHhc---CCCCCccCccceeeecCC-----
Confidence 999999999999999999999999999999999999999999999999999998 655678999999999999
Q ss_pred cccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--cc
Q psy12655 162 KLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT--GK 239 (299)
Q Consensus 162 ~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~--~~ 239 (299)
+| ||||+| .|++| ++||||+||++|++ ++++||++|.+||++|||+ .|
T Consensus 139 --~~-EFmI~p------~ea~~-~~ev~~~lk~il~~--------------------~~eeaL~ll~eAi~~aGy~~g~d 188 (341)
T PRK08350 139 --NF-EYYVLV------RDLME-ITDVVDAVNKILEN--------------------SKEVSLEGLSKASEKAGDELGLE 188 (341)
T ss_pred --ce-EEEECc------hHhhh-hHHHHHHHHHHHhh--------------------ChHHHHHHHHHHHHHhCCCcccc
Confidence 45 999999 79999 79999999999984 7899999999999999999 47
Q ss_pred eEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
|.+|+|| + +.+|++||+ +|+++|||+||| ||+|
T Consensus 189 v~~~lD~---------~-------------~~~t~~eli----~l~~kYPIvsIE-p~~E 221 (341)
T PRK08350 189 VALGIAQ---------K-------------REMETEKVL----NLVEDNNIAYIK-PIGD 221 (341)
T ss_pred EEEeecc---------C-------------CCCCHHHHH----HHHHHCCEEEEE-cCCc
Confidence 9999999 1 126899999 999999999999 9997
|
|
| >PF00113 Enolase_C: Enolase, C-terminal TIM barrel domain; InterPro: IPR020810 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-55 Score=412.32 Aligned_cols=157 Identities=61% Similarity=1.003 Sum_probs=140.2
Q ss_pred cccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHH
Q psy12655 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKE 222 (299)
Q Consensus 143 ~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~ 222 (299)
++||+|||||||||+||+|+|+||||||+|.|+.||+|+|||++||||+|+++|++|+|...|+|||||||+|+++++|+
T Consensus 2 ~~lPvP~~nvinGG~ha~~~l~~QEfmI~P~ga~s~~eal~~~~eVy~~Lk~il~~k~G~~~t~vgDeGGfaP~~~~~ee 81 (295)
T PF00113_consen 2 YTLPVPMFNVINGGKHAGNKLDFQEFMIVPVGADSFSEALRMGAEVYHALKKILKKKGGKFATNVGDEGGFAPNIDDNEE 81 (295)
T ss_dssp EEE-EEEEEEEE-GGGSSSSCSSSEEEEEETT-SSHHHHHHHHHHHHHHHHHHHHHHH-GGGGSBETTSSB--SBSSHHH
T ss_pred cccCcceEEEEcCccCCCCcccceEEEEEeccCCCHHHHHHhhhHHHHHHHHHHhhcccccccccCcccccCCCCcchhH
Confidence 68999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccc--cCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~--~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
||++|++||+++||+.+|.||||||||||| ++|+|++.++++.+++++.+|++||+|||.+|+++|||+||||||+|
T Consensus 82 aL~ll~~Ai~~aGy~~~v~ialD~AAsefyd~~~gkY~~~~~~~~~~~~~~~s~delid~y~~li~~YPIvsIEDpf~e 160 (295)
T PF00113_consen 82 ALDLLMEAIKEAGYEPDVAIALDVAASEFYDEEDGKYDLEFKSKEKDPSRYKSSDELIDYYKDLIKKYPIVSIEDPFDE 160 (295)
T ss_dssp HHHHHHHHHHHTT-TTTBEEEEE--GGGGEETETTEEETTTTSSSSTGGGEEEHHHHHHHHHHHHHHS-EEEEESSS-T
T ss_pred HHHHHHHHHHHccccceeeeeccccHHHhhhccCCeEEEeecccccccccccCHHHHHHHHHHHHHhcCeEEEEccccc
Confidence 999999999999999999999999999999 67999998877555667789999999999999999999999999997
|
In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3TQP_B 2PU1_A 1OEP_A 2PA6_A 1PDY_A 1PDZ_A 3UJ2_E .... |
| >PF03952 Enolase_N: Enolase, N-terminal domain; InterPro: IPR020811 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=365.05 Aligned_cols=131 Identities=63% Similarity=0.907 Sum_probs=115.6
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
+|++|++||||||||+|||||||+|++|.+ |++||||+|||.|||+|+||++++||+||||.+||+|||+.|+|+|+
T Consensus 1 ~I~~v~~r~IlDsrG~PTVEveV~~~~g~~~ra~~PsGaStG~~Ea~elrD~~~~~~~gkgV~~Av~~vn~~i~~~L~-- 78 (132)
T PF03952_consen 1 TITKVKAREILDSRGNPTVEVEVFTSNGNVGRASVPSGASTGSHEAVELRDGDPERYGGKGVSKAVENVNEIIAPALI-- 78 (132)
T ss_dssp BEEEEEEEEEE-TTS-EEEEEEEEETTEEEEEEE--B-SSSSSSS-B---B-STTSGGGTBHHHHHHHHHHTHHHHHT--
T ss_pred CeEEEEEEEEEcCCCCceEEEEEEECCcccceeccccccCCCccccccccCCCcceecCcccchhhhhHHHHHHHHHH--
Confidence 599999999999999999999999999965 99999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHH
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHL 134 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi 134 (299)
|++++||++||++|+++|||+||++||+|+++|||||+|||+|+++++|||+||
T Consensus 79 g~~~~dQ~~iD~~L~~lDgT~nk~~lGaNa~lavS~A~a~AaA~~~~~pL~~~l 132 (132)
T PF03952_consen 79 GLDPTDQEEIDQILIELDGTPNKSRLGANAILAVSLAVAKAAAAAKGIPLYRYL 132 (132)
T ss_dssp TSBTT-HHHHHHHHHHHHTSTTSTTT-HHHHHHHHHHHHHHHHHHHTS-HHHHH
T ss_pred hcchhhHHHhCccceeccCChhhhcccchHHHHHHHHHHHHHHHHcCCChhhcC
Confidence 799999999999999999999999999999999999999999999999999997
|
In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3OTR_F 3QTP_A 1PDY_A 1PDZ_A 3TQP_B 2PTZ_A 2PTW_A .... |
| >cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-07 Score=91.63 Aligned_cols=208 Identities=24% Similarity=0.299 Sum_probs=120.6
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .+.| ..+|-|+|.|++|.. -|-+++ |.|..+..+..
T Consensus 1 ~~I~~v~~~~~~~pl~~~~~~~~~~~~~~~~v~V~v~t~~G~~G~Ge~~~-------------------~~~~~~~~~~~ 61 (355)
T cd03321 1 VLITGLRARAVNVPMQYPVHTSVGTVATAPLVLIDLATDEGVTGHSYLFT-------------------YTPAALKSLKQ 61 (355)
T ss_pred CeeEEEEEEEEEccCCCccccccceeccCcEEEEEEEECCCCeEEEeeec-------------------CCCCcHHHHHH
Confidence 678888887553 1233 256789999999874 443221 22323333333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.++ .++|.|+ |.+. +...+.+.|...-. ..+ ..+...|+-|+.+|+.-+.++..|+|+|+.|+ |.. -+
T Consensus 62 ~~~-~l~p~Li--G~~~-~~~~~~~~~~~~~~~~~~-~~~~~~a~aaid~AlwDl~gk~~g~Pv~~LlG---g~~---~~ 130 (355)
T cd03321 62 LLD-DMAALLV--GEPL-APAELERALAKRFRLLGY-TGLVRMAAAGIDMAAWDALAKVHGLPLAKLLG---GNP---RP 130 (355)
T ss_pred HHH-HHHHHhC--CCCC-ChHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC---CC
Confidence 344 5999999 4554 44556655544310 001 01123578999999999999999999999998 642 24
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~l 226 (299)
+|+...++.+ .| ....+++.++..+=|+.+|= | +|. .++++.++.
T Consensus 131 v~~y~s~~~~--------------~~--~~~~~~a~~~~~~Gf~~~Ki----K-------vg~--------~~~~~d~~~ 175 (355)
T cd03321 131 VQAYDSHGLD--------------GA--KLATERAVTAAEEGFHAVKT----K-------IGY--------PTADEDLAV 175 (355)
T ss_pred eeEEEeCCCC--------------hH--HHHHHHHHHHHHhhhHHHhh----h-------cCC--------CChHhHHHH
Confidence 5655433111 01 11223333333333333331 2 221 233455555
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| +++.|.+|+- ..+|.++-+.+.+.| ++|+|.+||+|+.
T Consensus 176 v~air~~~g--~~~~l~vDaN----------------------~~~~~~~A~~~~~~l-~~~~i~~iEeP~~ 222 (355)
T cd03321 176 VRSIRQAVG--DGVGLMVDYN----------------------QSLTVPEAIERGQAL-DQEGLTWIEEPTL 222 (355)
T ss_pred HHHHHHhhC--CCCEEEEeCC----------------------CCcCHHHHHHHHHHH-HcCCCCEEECCCC
Confidence 554444444 5789999961 125567878887777 6899999999984
|
MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2 | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-07 Score=90.47 Aligned_cols=110 Identities=21% Similarity=0.283 Sum_probs=76.9
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
+|++|...- .+|=|+|+|++|.. |-.|+. . + ..++..+++.|+|.|+ |
T Consensus 1 kI~~i~~~~-------~~v~V~i~td~Gi~----------G~GE~~----~------~---~~~~~~i~~~l~p~li--G 48 (341)
T cd03327 1 KIKSVRTRV-------GWLFVEIETDDGTV----------GYANTT----G------G---PVACWIVDQHLARFLI--G 48 (341)
T ss_pred CeEEEEEEE-------EEEEEEEEECCCCe----------EEecCC----C------c---hHHHHHHHHHHHHHhC--C
Confidence 588888853 26889999999864 222220 0 0 1234567788999999 7
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.|+.+...+.+.|.........+.+...|+.|+.+|+.-+.++..|+|+|++|+ |....++|
T Consensus 49 ~dp~~~~~~~~~l~~~~~~~~~~~~~~~a~said~AlwDl~gK~~g~Pv~~LLG---G~~r~~i~ 110 (341)
T cd03327 49 KDPSDIEKLWDQMYRATLAYGRKGIAMAAISAVDLALWDLLGKIRGEPVYKLLG---GRTRDKIP 110 (341)
T ss_pred CCchHHHHHHHHHHhhccccCCccHHHhHHHHHHHHHHHhcccccCCCHHHHcC---CCcCCceE
Confidence 899999999888865432111122334689999999999999999999999998 65333444
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown. |
| >TIGR01502 B_methylAsp_ase methylaspartate ammonia-lyase | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-06 Score=87.10 Aligned_cols=215 Identities=20% Similarity=0.247 Sum_probs=121.4
Q ss_pred eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhh
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKL 97 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l 97 (299)
+|-|+|.|++|.. .|-+++-.=+|.+ -||+ .|. ....+..|++.|+|.|+ |.|+++.+++-+.|...
T Consensus 51 ~vlV~i~tddG~~G~GE~~~~~ysg~~----g~~~---~~~---~~~~~~~i~~~laP~Li--G~d~~~~~~l~~~~~~~ 118 (408)
T TIGR01502 51 SLSVLLVLEDGQVVHGDCAAVQYSGAG----GRDP---LFL---AKDFIPVIEKEVAPKLI--GRDITNFKDMAEVFEKM 118 (408)
T ss_pred EEEEEEEECCCCEEEEEeecceeccCc----cccc---ccc---HHHHHHHHHHHhhHHHc--CCCccCHHHHHHHHHHH
Confidence 6779999999975 4443320111100 0010 111 45566778888999999 78999988887777665
Q ss_pred cCCCCcccCCChhh-HHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCCC
Q psy12655 98 DGTENKSKFGANAI-LGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGAS 176 (299)
Q Consensus 98 DgT~nks~lGaNai-lavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~ 176 (299)
-. +.. + ..++ .|+++|+.-+.|+..|+|||+.|+..+|.....-|+|....++- ....
T Consensus 119 ~~--~~~-~-~~a~kaavd~AL~D~~ak~~g~pl~~LLG~~~~~~~~~~~vp~~~s~g~-----------------~~~~ 177 (408)
T TIGR01502 119 TV--NRN-L-HTAIRYGVSQALLDAAAKTRKTTMAEVIRDEYNPGAETNAVPVFAQSGD-----------------DRYD 177 (408)
T ss_pred hh--cCc-c-hhHHHHHHHHHHHHHHHHHcCCcHHHHhCcccccCCcCCceeEEEEeec-----------------cCCC
Confidence 21 111 2 2466 99999999999999999999999832222222346666555421 0122
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCCCc--ccCCCCCcCCCCCChHHHHHHHHHHHHHcc-cccceEEEeecccccccc
Q psy12655 177 SFSEAMKIGSEVYHHLKKVINTKFGLDAT--AVGDEGGFAPNILDNKEGLRLIVEAIEKAG-YTGKVEIGMDVAASEFFK 253 (299)
Q Consensus 177 s~~eal~~~~ev~~~l~~~l~~k~G~~~t--~vgdeGgfap~~~~~e~aL~ll~eAi~~ag-~~~~i~ialD~AAse~~~ 253 (299)
+..+.+..+.++..+ |.+.+ .+| +-+ ... .+-++-+.+.|++.+ ...++.|-+|+-.
T Consensus 178 ~~d~m~~~a~~~~~~---------G~~~~~KkvG----~~~-~k~-~~~~~~~~~ri~~lr~~g~~~~l~vDaN~----- 237 (408)
T TIGR01502 178 NVDKMILKEVDVLPH---------GLINSVEELG----LDG-EKL-LEYVKWLRDRIIKLGREGYAPIFHIDVYG----- 237 (408)
T ss_pred CHHHHHHHHHHHHhc---------cCccceeeec----CCH-HHh-hhhHHHHHHHHHHhhccCCCCeEEEEcCC-----
Confidence 333333333222211 21000 122 211 111 133455556666554 1124567777511
Q ss_pred CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc---CCeeEeecCCC
Q psy12655 254 EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE---YPIVSIEDPML 298 (299)
Q Consensus 254 ~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~---yPIvsiEDp~~ 298 (299)
| + +.-.-+|.++.++|+..|-++ |++ +||+|++
T Consensus 238 ---~-~-------~~~~~~~~~~ai~~l~~l~~~~~~~~~-~iEqPv~ 273 (408)
T TIGR01502 238 ---T-I-------GEAFGVDIKAMADYIQTLAEAAKPFHL-RIEGPMD 273 (408)
T ss_pred ---C-c-------ccccCCCHHHHHHHHHHHHHhCccCCe-EEecCCC
Confidence 0 0 001235889999999999885 666 9999995
|
This model describes methylaspartate ammonia-lyase, also called beta-methylaspartase (EC 4.3.1.2). It follows methylaspartate mutase (composed of S and E subunits) in one of several possible pathways of glutamate fermentation. |
| >PRK15072 bifunctional D-altronate/D-mannonate dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.8e-07 Score=87.97 Aligned_cols=120 Identities=20% Similarity=0.318 Sum_probs=81.2
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+...+ ..+++.|=|+|+|++|.. -|-++. .|.. ......+.+.++|.|+
T Consensus 1 mkI~~v~~~~~--~~~~~~vlVri~td~G~~G~GE~~~--------------------~~~~-~~~~~~~~~~l~p~l~- 56 (404)
T PRK15072 1 MKIVDAEVIVT--CPGRNFVTLKITTDDGVTGLGDATL--------------------NGRE-LAVASYLQDHVCPLLI- 56 (404)
T ss_pred CeeEEEEEEEE--CCCCcEEEEEEEeCCCCeEEEeccc--------------------CCch-HHHHHHHHHHHHHHcC-
Confidence 89999999765 345678889999999974 333211 0001 1224456778999998
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEE
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFN 151 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~n 151 (299)
|.++.+-..|-+.|...- .-....+...++.|+.+|+.=+.|+..|+|||+.|+ |.. +-++|+.+
T Consensus 57 -G~d~~~~e~~~~~l~~~~-~~~~~~~~~~a~aaID~AlwDl~gK~~g~Pl~~LLG---G~~--r~~v~~y~ 121 (404)
T PRK15072 57 -GRDAHRIEDIWQYLYRGA-YWRRGPVTMSAIAAVDMALWDIKAKAAGMPLYQLLG---GAS--REGVMVYG 121 (404)
T ss_pred -CCChhHHHHHHHHHHHhc-ccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCc--cCceEEEE
Confidence 789988888877775421 000001122488999999999999999999999998 643 23444444
|
|
| >cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.4e-06 Score=82.54 Aligned_cols=209 Identities=17% Similarity=0.197 Sum_probs=120.9
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
+|++|..+.+ + .+.|=|+|.|++|.. .+-+..+ +. .......++. |+|.|+
T Consensus 1 ~I~~i~~~~~-~---~~~~~V~i~~~~G~~G~GE~~~~---~~------------------~~~~~~~~~~-l~p~l~-- 52 (352)
T cd03325 1 KITKIETFVV-P---PRWLFVKIETDEGVVGWGEPTVE---GK------------------ARTVEAAVQE-LEDYLI-- 52 (352)
T ss_pred CeEEEEEEEE-C---CCEEEEEEEECCCCEEEeccccC---Cc------------------chHHHHHHHH-HHHHhC--
Confidence 5888999876 3 357889999999975 4432110 10 0112233455 999998
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|.++.+...+=+.|.... ..........++.|+-+|+.=+.++..|+|+|+.|+ |.....+|+ ...+.
T Consensus 53 G~d~~~~~~~~~~~~~~~-~~~~~~~~~~a~aaid~Al~Dl~gk~~g~pv~~LLG---g~~~~~i~~--~~~~~------ 120 (352)
T cd03325 53 GKDPMNIEHHWQVMYRGG-FYRGGPVLMSAISGIDQALWDIKGKVLGVPVHQLLG---GQVRDRVRV--YSWIG------ 120 (352)
T ss_pred CCCHHHHHHHHHHHHHhc-CcCCcchhhhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccceeEE--EEeCC------
Confidence 788888776655553210 001111123478999999999999999999999998 643333443 22221
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHHHHccccc
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG 238 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~ 238 (299)
..+..+..+ .+++... .|. +-..+|...++.+.-.++++-++.|...-+..| +
T Consensus 121 --------------~~~~~~~~~-------~~~~~~~--~Gf~~~KiKvg~~~~~~~~~~~~~~D~~~i~avr~~~g--~ 175 (352)
T cd03325 121 --------------GDRPSDVAE-------AARARRE--AGFTAVKMNATEELQWIDTSKKVDAAVERVAALREAVG--P 175 (352)
T ss_pred --------------CCCHHHHHH-------HHHHHHH--cCCCEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhC--C
Confidence 112322222 2233322 131 112344322232211234555666666655555 4
Q ss_pred ceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 239 KVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 239 ~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.|.+|+- ..+|.++-+++...| ++|+|.+||+|+.
T Consensus 176 ~~~l~vDaN----------------------~~~~~~~A~~~~~~l-~~~~i~~iEeP~~ 212 (352)
T cd03325 176 DIDIGVDFH----------------------GRVSKPMAKDLAKEL-EPYRLLFIEEPVL 212 (352)
T ss_pred CCEEEEECC----------------------CCCCHHHHHHHHHhc-cccCCcEEECCCC
Confidence 788999972 224566766665555 6799999999985
|
D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03314 MAL Methylaspartate ammonia lyase (3-methylaspartase, MAL) is a homodimeric enzyme, catalyzing the magnesium-dependent reversible alpha,beta-elimination of ammonia from L-threo-(2S,3S)-3-methylaspartic acid to mesaconic acid | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.6e-06 Score=80.93 Aligned_cols=210 Identities=21% Similarity=0.211 Sum_probs=116.7
Q ss_pred eeEEEEEEECCCce-EEE-eecCCCCcceeeeeeccCCcccccCccH----HHHHHHHHHhHHHHHhcCCCCccchHHHH
Q psy12655 18 PTVEVDLTTELGLF-RAA-VPSGASTGIYEALELRDNDKAHYHGKGV----TKAVGFINNDIAPALLKESFEVTQQKEID 91 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~-~psGaS~G~~Ea~elrd~~~~~~~Gkgv----~~Av~~in~~i~p~Li~~g~~~~dQ~~ID 91 (299)
..|=|+|.|++|.. -+- +|. .++|. .|.+. ..+...|++.|+|.|+ |.|+.|...|-
T Consensus 13 ~~vlV~I~tddG~~G~GEa~~~-~~~~~--------------~g~~~~~~~~~~~~~i~~~lap~Li--G~d~~~i~~i~ 75 (369)
T cd03314 13 EAISVMLVLEDGQVAVGDCAAV-QYSGA--------------GGRDPLFLAADFIPVIEKVIAPALV--GRDVANFRPAA 75 (369)
T ss_pred cEEEEEEEECCCCEEEEecccc-cccCc--------------CCcccccchHHHHHHHHHhhhhHhc--CCCHHHHHHHH
Confidence 34559999999975 443 222 12211 11111 2234567888999999 78999988887
Q ss_pred HHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC---CccccccceEEeecCCcCCCCcccceeE
Q psy12655 92 EFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN---SNIILPVPAFNVINGGSHAGNKLAMQEF 168 (299)
Q Consensus 92 ~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~---~~~~lP~P~~nvinGG~ha~~~l~iQEf 168 (299)
+.|...--..+ .....+..|+.+|+.=+.++..|+|||+.|+ |. ...+-|+|....+++. .
T Consensus 76 ~~m~~~~~~g~--~~~~aaksAIDiALwDl~gK~~g~Pv~~LLG---g~~~~g~~r~~v~~y~~~~~~----~------- 139 (369)
T cd03314 76 AVLDKMRLDGN--RLHTAIRYGVSQALLDAVALAQRRTMAEVLC---DEYGLPLADEPVPIFAQSGDD----R------- 139 (369)
T ss_pred HHHHHHhhcCC--cchhhHHHHHHHHHHHHHHHHhCCcHHHHcC---CcccCCCcccceEEEEEecCc----c-------
Confidence 77744210011 1111245899999999999999999999997 43 2345777777543211 0
Q ss_pred EEEecCCCCHHHHHHHHHHHHHH-HHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcc-cccceEEEeec
Q psy12655 169 MILPTGASSFSEAMKIGSEVYHH-LKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAG-YTGKVEIGMDV 246 (299)
Q Consensus 169 miiP~ga~s~~eal~~~~ev~~~-l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag-~~~~i~ialD~ 246 (299)
.....+.++.+.++..+ .-+.++++ | |-+ ++. .+-++-..+.|+++. .-+++.|-+|+
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~~~~~k~k-G-----------~~~-~K~-~~~~~~~~~~v~avr~~G~~~~l~vDa 199 (369)
T cd03314 140 ------YINVDKMILKGADVLPHALINNVEEK-G-----------PKG-EKL-LEYVKWLSDRIRKLGRPGYHPILHIDV 199 (369)
T ss_pred ------cccHHHHHHHHHhhhhhhhhhhHhhc-C-----------ccH-HHH-HHhHHHHHHHHHHHhhcCCCCEEEEEc
Confidence 12333333333222111 01112212 3 210 100 011222233333333 11568888886
Q ss_pred cccccccCCceeeecCCCCCCCCCcc--CHHHHHHHHHHHHhcCC--eeEeecCCC
Q psy12655 247 AASEFFKEGQYDLDFKNPNSDKSQWL--PADKLTALYQEFIKEYP--IVSIEDPML 298 (299)
Q Consensus 247 AAse~~~~g~Y~~~fk~~~~~~~~~~--t~~elid~y~~l~~~yP--IvsiEDp~~ 298 (299)
- . .| ++.+ |.++.+++...|-+.|+ +.+|||||.
T Consensus 200 N--~-----~w-----------~~~~~~~~~~A~~~~~~Le~~~~~~~~~iEqP~~ 237 (369)
T cd03314 200 Y--G-----TI-----------GQAFDPDPDRAADYLATLEEAAAPFPLRIEGPMD 237 (369)
T ss_pred C--C-----cc-----------ccccCCCHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 1 1 00 1235 77899999999987655 789999995
|
This reaction is part of the main catabolic pathway for glutamate. MAL belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03317 NAAAR N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.6e-06 Score=79.16 Aligned_cols=95 Identities=24% Similarity=0.307 Sum_probs=71.1
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
..+=|+|.|++|.. -|-+.. .. ...|.|..+..++..+++.++|.|+ |.++.+..++.+.|..
T Consensus 25 ~~~~Vrv~t~~G~~G~GE~~~-----------~~---~~~~~~~~~~~~~~~i~~~~~p~l~--g~~~~~~~~~~~~~~~ 88 (354)
T cd03317 25 EFLIVELTDEEGITGYGEVVA-----------FE---GPFYTEETNATAWHILKDYLLPLLL--GREFSHPEEVSERLAP 88 (354)
T ss_pred eEEEEEEEECCCCeEEEecCC-----------CC---CCcccCCCHHHHHHHHHHHHHHHHc--CCCCCCHHHHHHHHHH
Confidence 34568888988864 332211 00 0135555666777888888999998 7899999999888866
Q ss_pred hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 97 LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 97 lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+.+ ...++.|+.+|+.-+.++..|+|+|+.|+
T Consensus 89 ~~~-------~~~a~aaid~AlwDl~gk~~g~Pv~~LLG 120 (354)
T cd03317 89 IKG-------NNMAKAGLEMAVWDLYAKAQGQSLAQYLG 120 (354)
T ss_pred hcC-------ChHHHHHHHHHHHHHHHHHcCCCHHHHhC
Confidence 532 23589999999999999999999999998
|
NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >PRK14017 galactonate dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-05 Score=78.47 Aligned_cols=209 Identities=16% Similarity=0.215 Sum_probs=118.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|..+.+ +. .+|=|+|.|++|.. -|-++.+ +. .......++ .++|.|+
T Consensus 1 mkI~~i~~~~~-~~---~~vlV~v~t~dG~~G~GE~~~~---~~------------------~~~~~~~~~-~~~p~l~- 53 (382)
T PRK14017 1 MKITKLETFRV-PP---RWLFLKIETDEGIVGWGEPVVE---GR------------------ARTVEAAVH-ELADYLI- 53 (382)
T ss_pred CeEEEEEEEEE-CC---CEEEEEEEECCCCeEEeccccC---Cc------------------hHHHHHHHH-HHHHHhC-
Confidence 89999999877 32 24679999999864 3332211 10 011122334 5899998
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcc-cCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKS-KFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSH 158 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks-~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~h 158 (299)
|.++.+...+-+.|... +-... .....|+-|+.||+.=+.|+..|+|||+.|+ |.....+ |+...+.
T Consensus 54 -G~d~~~~~~~~~~l~~~--~~~~~~~~~~~A~aaid~AlwDl~gK~~g~Pv~~LLG---g~~r~~i--~~~~~~~---- 121 (382)
T PRK14017 54 -GKDPRRIEDHWQVMYRG--GFYRGGPILMSAIAGIDQALWDIKGKALGVPVHELLG---GLVRDRI--RVYSWIG---- 121 (382)
T ss_pred -CCCHHHHHHHHHHHHHh--cccCCchHHhhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCcccee--eEeEeCC----
Confidence 78888887776666431 10000 1112378999999999999999999999998 6432333 3332221
Q ss_pred CCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc--ccCCCCCcCCCCCChHHHHHHHHHHHHHccc
Q psy12655 159 AGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT--AVGDEGGFAPNILDNKEGLRLIVEAIEKAGY 236 (299)
Q Consensus 159 a~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t--~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~ 236 (299)
..+..+.++.+ .+... .|-... .+|..-+....-.++++.++.|...-+..|
T Consensus 122 ----------------~~~~~~~~~~a-------~~~~~--~Gf~~~KiKv~~~~~~~~~~~~~~~d~~~i~avr~~~g- 175 (382)
T PRK14017 122 ----------------GDRPADVAEAA-------RARVE--RGFTAVKMNGTEELQYIDSPRKVDAAVARVAAVREAVG- 175 (382)
T ss_pred ----------------CCCHHHHHHHH-------HHHHH--cCCCEEEEcCcCCccccccHHHHHHHHHHHHHHHHHhC-
Confidence 11333332322 22222 142111 222100011111234555666666555555
Q ss_pred ccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 237 TGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 237 ~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+++.|.+|+- +.+|.++-+.+...| ++|++.+||+|+.
T Consensus 176 -~~~~l~vDaN----------------------~~w~~~~A~~~~~~l-~~~~~~~iEeP~~ 213 (382)
T PRK14017 176 -PEIGIGVDFH----------------------GRVHKPMAKVLAKEL-EPYRPMFIEEPVL 213 (382)
T ss_pred -CCCeEEEECC----------------------CCCCHHHHHHHHHhh-cccCCCeEECCCC
Confidence 4788999971 124556655555554 6799999999984
|
|
| >cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.9e-05 Score=75.90 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=122.4
Q ss_pred ceeeEEEeEEeC--------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 2 PISKIHARQIFD--------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 2 ~I~~v~ar~ilD--------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
+|++|+...+=- -...+++=|+|.|++|.. .|-++...+ .......+++.
T Consensus 1 kI~~i~~~~~~~p~~~~~~~~~~~~~~~V~v~~~~G~~G~GE~~~~~~---------------------~~~~~~~l~~~ 59 (357)
T cd03316 1 KITDVETFVLRVPLPEPGGAVTWRNLVLVRVTTDDGITGWGEAYPGGR---------------------PSAVAAAIEDL 59 (357)
T ss_pred CeeEEEEEEEecCCcccccccccceEEEEEEEeCCCCEEEEeccCCCC---------------------chHHHHHHHHH
Confidence 466666665421 123467889999999875 444332100 12234556777
Q ss_pred HHHHHhcCCCCccchHHHHHHHHhhcCCCCc-ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEE
Q psy12655 73 IAPALLKESFEVTQQKEIDEFMIKLDGTENK-SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFN 151 (299)
Q Consensus 73 i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nk-s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~n 151 (299)
++|.|+ |.++.+..++-+.|...-- .+. ...-..+..|+.+|+.-+.++..|+|+|+.|+ |... -.+|+..
T Consensus 60 ~~p~l~--G~~~~~~~~~~~~l~~~~~-~~~~~~~~~~a~~aid~Al~Dl~gk~~g~pl~~llG---g~~~--~~v~~~~ 131 (357)
T cd03316 60 LAPLLI--GRDPLDIERLWEKLYRRLF-WRGRGGVAMAAISAVDIALWDIKGKAAGVPVYKLLG---GKVR--DRVRVYA 131 (357)
T ss_pred HHHHcc--CCChHHHHHHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHhcccccCCcHhhccC---CccC--CceeeEE
Confidence 899998 7888888887666654311 000 00013578999999999999999999999998 6422 2344443
Q ss_pred eecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHHHHHH
Q psy12655 152 VINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLRLIVE 229 (299)
Q Consensus 152 vinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ll~e 229 (299)
.+.++. .+..+.++.+ ++..+ .|... ..+|. ++... ++.++.++.|..
T Consensus 132 ~~~~~~------------------~~~~~~~~~a-------~~~~~--~Gf~~~Kik~g~--~~~~~-~~~~~d~~~v~~ 181 (357)
T cd03316 132 SGGGYD------------------DSPEELAEEA-------KRAVA--EGFTAVKLKVGG--PDSGG-EDLREDLARVRA 181 (357)
T ss_pred ecCCCC------------------CCHHHHHHHH-------HHHHH--cCCCEEEEcCCC--CCcch-HHHHHHHHHHHH
Confidence 332110 0333332222 22222 24211 12221 11111 345666666666
Q ss_pred HHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 230 AIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 230 Ai~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.-+.+| .++.|.+|+- + .+|.+|.+++...| ++|.+.+||+|+.
T Consensus 182 ir~~~g--~~~~l~vDaN-------~---------------~~~~~~a~~~~~~l-~~~~i~~iEqP~~ 225 (357)
T cd03316 182 VREAVG--PDVDLMVDAN-------G---------------RWDLAEAIRLARAL-EEYDLFWFEEPVP 225 (357)
T ss_pred HHHhhC--CCCEEEEECC-------C---------------CCCHHHHHHHHHHh-CccCCCeEcCCCC
Confidence 655565 4688888861 1 24567777666555 6788999999985
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD). |
| >cd03322 rpsA The starvation sensing protein RpsA from E | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.4e-06 Score=79.86 Aligned_cols=117 Identities=21% Similarity=0.301 Sum_probs=77.6
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
+|++|... ++ +-+++.|=|+|.|++|.. -|-++. +|. .......+++.++|.|+
T Consensus 1 kI~~ie~~-~~-~~~~~~vlV~v~td~G~~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~l~-- 55 (361)
T cd03322 1 KITAIEVI-VT-CPGRNFVTLKITTDQGVTGLGDATL---NGR------------------ELAVKAYLREHLKPLLI-- 55 (361)
T ss_pred CeEEEEEE-EE-CCCCCEEEEEEEeCCCCeEEEeccc---CCC------------------HHHHHHHHHHHHHHHcC--
Confidence 58888884 33 345667889999999974 443221 110 11123456778999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.++.+...+-+.|....-... ......++.|+.+|+.=+.|+..|+|||+.|+ |.....+|+
T Consensus 56 G~d~~~~~~~~~~~~~~~~~~~-~~~~~~a~aaid~AlwDl~gk~~g~Pl~~LLG---g~~r~~v~~ 118 (361)
T cd03322 56 GRDANRIEDIWQYLYRGAYWRR-GPVTMNAIAAVDMALWDIKGKAAGMPLYQLLG---GKSRDGIMV 118 (361)
T ss_pred CCChhHHHHHHHHHHHhcccCC-chHHHHHHHHHHHHHHHHhHhhcCCcHHHHcC---CCccCeeeE
Confidence 7899988888777754210000 00112378999999999999999999999998 643334443
|
coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad. |
| >cd03329 MR_like_4 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 4 | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.6e-05 Score=72.45 Aligned_cols=168 Identities=16% Similarity=0.222 Sum_probs=98.8
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...+...++|.|+ |.|+.+-+++-+.|...-. .....|+-|+.||+.=..++..|+|||+.|+ |.. .
T Consensus 58 ~~~~~~~l~p~li--G~d~~~~~~~~~~~~~~~~-----~~~~~A~said~AlwDl~gk~~g~Pl~~LLG---g~~-~-- 124 (368)
T cd03329 58 PALVDRFLKKVLI--GQDPLDRERLWQDLWRLQR-----GLTDRGLGLVDIALWDLAGKYLGLPVHRLLG---GYR-E-- 124 (368)
T ss_pred HHHHHHHHHHhcC--CCChhHHHHHHHHHHHHhc-----CcchhHHHHHHHHHHHHhhhhcCCcHHHHhh---ccc-c--
Confidence 3456778999999 7899998888777755311 1334589999999999999999999999998 632 2
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
.+|....+..|.+ +.+..+.++..+.+ ++..+ .|.....+- +| .+. ..++.++
T Consensus 125 ~v~~y~s~~~~~~-------------~~~~~~~~~~~~~a-------~~~~~--~Gf~~~Kik--~~-~~~--~~~~di~ 177 (368)
T cd03329 125 KIPAYASTMVGDD-------------LEGLESPEAYADFA-------EECKA--LGYRAIKLH--PW-GPG--VVRRDLK 177 (368)
T ss_pred ceeEEEecCCCcc-------------cccCCCHHHHHHHH-------HHHHH--cCCCEEEEe--cC-Cch--hHHHHHH
Confidence 3344433322211 11233444433322 22222 242111120 11 110 1344555
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...=+.+| +++.|.+|+. + .+|.++.+.+.+.| ++|++.+||+|+.
T Consensus 178 ~i~~vR~~~G--~~~~l~vDan-------~---------------~~~~~~A~~~~~~l-~~~~l~~iEeP~~ 225 (368)
T cd03329 178 ACLAVREAVG--PDMRLMHDGA-------H---------------WYSRADALRLGRAL-EELGFFWYEDPLR 225 (368)
T ss_pred HHHHHHHHhC--CCCeEEEECC-------C---------------CcCHHHHHHHHHHh-hhcCCCeEeCCCC
Confidence 5554444555 4688999972 1 24456666555554 6688899999984
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown. |
| >TIGR02534 mucon_cyclo muconate and chloromuconate cycloisomerases | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.1e-05 Score=74.28 Aligned_cols=194 Identities=18% Similarity=0.184 Sum_probs=111.8
Q ss_pred CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
.+++=|+|+|++|.. .|-+.. +. ...|.|.+.......+++.++|.|+ |.++.+...+-+.|.
T Consensus 27 ~~~~~V~v~t~~G~~G~Ge~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~l~--G~~~~~~~~~~~~~~ 90 (368)
T TIGR02534 27 QTLVLVRIRTEDGVIGYGEGTT-----------IG---GLWWGGESPETIKANIDTYLAPVLV--GRDATEIAAIMADLE 90 (368)
T ss_pred ccEEEEEEEECCCCeEEEecCC-----------CC---CCccCCCCHHHHHHHHHHhhHHHHc--CCChhhHHHHHHHHH
Confidence 467889999998864 443321 10 0135555566666778888999999 677766544433333
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCC
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA 175 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga 175 (299)
.+- .-+..++.|+.+|+.-+.++..|+|+|+.|+ |.....+|+ .-.+. .
T Consensus 91 ~~~------~~~~~a~said~AlwDl~gK~~g~Pv~~LLG---g~~r~~v~~--~~~~~------------------~-- 139 (368)
T TIGR02534 91 KVV------AGNRFAKAAVDTALHDAQARRLGVPVSELLG---GRVRDSVDV--TWTLA------------------S-- 139 (368)
T ss_pred HHh------cCCchHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCceEE--EEEEe------------------C--
Confidence 221 0122389999999999999999999999998 643233332 21111 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeecccccccc
Q psy12655 176 SSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFK 253 (299)
Q Consensus 176 ~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~ 253 (299)
.+..+.++ ++++.++ +.|... ..+|. .++++-++.+...-+..| +++.|.+|+-
T Consensus 140 ~~~~~~~~-------~~~~~~~-~~Gf~~~KiKvg~--------~~~~~d~~~v~~~re~~g--~~~~l~~DaN------ 195 (368)
T TIGR02534 140 GDTDRDIA-------EAEERIE-EKRHRSFKLKIGA--------RDPADDVAHVVAIAKALG--DRASVRVDVN------ 195 (368)
T ss_pred CCHHHHHH-------HHHHHHH-hcCcceEEEEeCC--------CCcHHHHHHHHHHHHhcC--CCcEEEEECC------
Confidence 11112222 2222222 124211 12331 234555666666556555 4688999961
Q ss_pred CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 254 EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 254 ~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
..+|.++-+.+. +.+++|.+.+||+|+.
T Consensus 196 ----------------~~~~~~~A~~~~-~~l~~~~~~~iEeP~~ 223 (368)
T TIGR02534 196 ----------------AAWDERTALHYL-PQLADAGVELIEQPTP 223 (368)
T ss_pred ----------------CCCCHHHHHHHH-HHHHhcChhheECCCC
Confidence 124556655544 4446688999999984
|
This model encompasses muconate cycloisomerase (EC 5.5.1.1) and chloromuconate cycloisomerase (EC 5.5.1.7), enzymes that often overlap in specificity. It excludes more distantly related proteins such as mandelate racemase (5.1.2.2). |
| >PRK15440 L-rhamnonate dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.9e-05 Score=75.56 Aligned_cols=76 Identities=20% Similarity=0.163 Sum_probs=55.5
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...+++.|+|.|+ |.|+.+.+.+-+.|...-.......+..+|+.|+-+|+.=..++..|+|+|+.|+ |....++
T Consensus 82 ~~~v~~~l~p~Li--G~dp~~~e~l~~~m~~~~~~~g~~g~~~~A~saIDiALwDl~gK~~g~Pv~~LLG---G~~r~~v 156 (394)
T PRK15440 82 AFIVEKHLNRFIE--GKCVSDIELIWDQMLNATLYYGRKGLVMNTISCVDLALWDLLGKVRGLPVYKLLG---GAVRDEL 156 (394)
T ss_pred HHHHHHHHHHHcC--CCChhhHHHHHHHHHhhccccCCccHhhhHHHHHHHHHHHHhhhHcCCcHHHHcC---CCCCCee
Confidence 3467788999999 7899999888777754311011111234799999999999999999999999998 6533344
Q ss_pred c
Q psy12655 146 P 146 (299)
Q Consensus 146 P 146 (299)
|
T Consensus 157 ~ 157 (394)
T PRK15440 157 Q 157 (394)
T ss_pred E
Confidence 4
|
|
| >cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway | Back alignment and domain information |
|---|
Probab=98.25 E-value=9.7e-05 Score=71.48 Aligned_cols=191 Identities=18% Similarity=0.234 Sum_probs=111.7
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
..+=|+|+|++|.. .|-+.. +.. ..|.|......+..++..++|.|+ |.++.+...+-+.|..
T Consensus 29 ~~~~V~v~t~~G~~G~GE~~~-----------~~~---~~~~~~~~~~~~~~l~~~~~~~l~--G~~~~~~~~~~~~l~~ 92 (365)
T cd03318 29 SLVLVRLTTSDGVVGIGEATT-----------PGG---PAWGGESPETIKAIIDRYLAPLLI--GRDATNIGAAMALLDR 92 (365)
T ss_pred ceEEEEEEECCCCeEEEecCC-----------CCC---CccCCCCHHHHHHHHHHhhHHHHc--CCChHHHHHHHHHHHH
Confidence 44668888988864 333211 100 013344445556778888999998 7888887766555433
Q ss_pred -hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCC
Q psy12655 97 -LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA 175 (299)
Q Consensus 97 -lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga 175 (299)
+.+ +..++.|+.+|+.-+.++..|+|+|+.|+ |.....+|+ .-.+. .+
T Consensus 93 ~~~~-------~~~a~said~AlwDl~gK~~g~Pl~~LLG---g~~~~~v~~--~~~~~------------------~~- 141 (365)
T cd03318 93 AVAG-------NLFAKAAIEMALLDAQGRRLGLPVSELLG---GRVRDSLPV--AWTLA------------------SG- 141 (365)
T ss_pred HhcC-------CccHHHHHHHHHHHHHHhHcCCCHHHHcC---CCcCCceEE--EEEEe------------------CC-
Confidence 221 23488999999999999999999999998 643333433 21111 11
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcC-C--CCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccc
Q psy12655 176 SSFSEAMKIGSEVYHHLKKVINTKFG-L--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFF 252 (299)
Q Consensus 176 ~s~~eal~~~~ev~~~l~~~l~~k~G-~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~ 252 (299)
+..+..+ ...+.++ .| . +-..+|. .++++-++.|...-+..| .++.|.+|+-
T Consensus 142 -~~~~~~~-------~~~~~~~--~G~f~~~KiKvg~--------~~~~~d~~~v~avr~~~g--~~~~l~iDaN----- 196 (365)
T cd03318 142 -DTERDIA-------EAEEMLE--AGRHRRFKLKMGA--------RPPADDLAHVEAIAKALG--DRASVRVDVN----- 196 (365)
T ss_pred -CHHHHHH-------HHHHHHh--CCCceEEEEEeCC--------CChHHHHHHHHHHHHHcC--CCcEEEEECC-----
Confidence 1222222 2222332 13 1 1112331 234556666655555555 3688999972
Q ss_pred cCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 253 KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 253 ~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
..+|.++-+. +.+.+++|.+.+||+|+.
T Consensus 197 -----------------~~~~~~~A~~-~~~~l~~~~~~~iEeP~~ 224 (365)
T cd03318 197 -----------------QAWDESTAIR-ALPRLEAAGVELIEQPVP 224 (365)
T ss_pred -----------------CCCCHHHHHH-HHHHHHhcCcceeeCCCC
Confidence 1245556444 445567789999999985
|
This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3 | Back alignment and domain information |
|---|
Probab=98.23 E-value=8.3e-05 Score=71.95 Aligned_cols=67 Identities=21% Similarity=0.228 Sum_probs=50.5
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
...+++.++|.|+ |.|+.+...|-+.|... .+... +.....|+.|+.+|+.=..++..|+|+|+.|+
T Consensus 53 ~~~i~~~~~p~li--G~d~~~~~~l~~~~~~~~~~~~~-~g~~~~a~aaiD~AlwDl~gK~~g~Pv~~LLG 120 (352)
T cd03328 53 AALVDGLLAPVVE--GRDALDPPAAWEAMQRAVRNAGR-PGVAAMAISAVDIALWDLKARLLGLPLARLLG 120 (352)
T ss_pred HHHHHHHHHHHhc--CCCcccHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHHHHHhhhhcCCcHHHHhc
Confidence 3356778999999 78999988887777543 21111 01112588999999999999999999999998
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown. |
| >COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00021 Score=69.42 Aligned_cols=92 Identities=23% Similarity=0.287 Sum_probs=60.3
Q ss_pred eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhh
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKL 97 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l 97 (299)
.|=|+|.|++|.. .|-++.+..... +..... + .+++.|+ |.++.+...+.+.|..-
T Consensus 31 ~v~v~i~~d~G~~G~GE~~~~~~~~~------------------~~~~~~-~--~~~~~l~--g~d~~~i~~~~~~~~~~ 87 (372)
T COG4948 31 RVIVEITTDDGIVGWGEAVPGGRARY------------------GEEAEA-V--LLAPLLI--GRDPFDIERIWQKLYRA 87 (372)
T ss_pred EEEEEEEECCCceeeccccCcccccc------------------hhhhhH-H--HHHHHhc--CCCHHHHHHHHHHHHHh
Confidence 6788999998875 554443211110 111111 1 5889998 78888877755554332
Q ss_pred -cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 98 -DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 98 -DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
... ...+.-.++.||-+|+.=..|+..|+|||+.|+
T Consensus 88 ~~~~--~~~~~~~a~sAvd~ALwDl~gK~~g~Pv~~LLG 124 (372)
T COG4948 88 GFAR--RGGITMAAISAVDIALWDLAGKALGVPVYKLLG 124 (372)
T ss_pred cccc--cchHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC
Confidence 221 112223699999999999999999999999998
|
|
| >cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00023 Score=67.45 Aligned_cols=158 Identities=22% Similarity=0.248 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q psy12655 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS 141 (299)
Q Consensus 62 v~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~ 141 (299)
...+...++. +.|.|+ |.++. ...+-+.|...- .-+..++.|+.+|++-+.++..|+|+|+.|+ |..
T Consensus 54 ~~~~~~~~~~-~~~~l~--G~~~~-~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~gk~~g~pv~~ll~---g~~ 120 (316)
T cd03319 54 VESVLAALKS-VRPALI--GGDPR-LEKLLEALQELL------PGNGAARAAVDIALWDLEAKLLGLPLYQLWG---GGA 120 (316)
T ss_pred HHHHHHHHHH-HHHHhc--CCCch-HHHHHHHHHHhc------cCChHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCC
Confidence 3444555665 489998 67776 554444443321 1134589999999999999999999999865 433
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCC
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILD 219 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~ 219 (299)
...+|+ .-.+ + ..+.++.+ ..+++.++ .|. +-..+| + +
T Consensus 121 ~~~~~~--~~~~------------------~--~~~~~~~~-------~~~~~~~~--~Gf~~iKik~g---~------~ 160 (316)
T cd03319 121 PRPLET--DYTI------------------S--IDTPEAMA-------AAAKKAAK--RGFPLLKIKLG---G------D 160 (316)
T ss_pred CCCcee--EEEE------------------e--CCCHHHHH-------HHHHHHHH--cCCCEEEEEeC---C------C
Confidence 333442 1111 1 11222222 22233332 242 111232 1 2
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.++.+....+..| ++.|.+|+- ..+|.++.+++...| ++|++.+||||+.
T Consensus 161 ~~~d~~~v~~lr~~~g---~~~l~vD~n----------------------~~~~~~~A~~~~~~l-~~~~l~~iEeP~~ 213 (316)
T cd03319 161 LEDDIERIRAIREAAP---DARLRVDAN----------------------QGWTPEEAVELLREL-AELGVELIEQPVP 213 (316)
T ss_pred hhhHHHHHHHHHHhCC---CCeEEEeCC----------------------CCcCHHHHHHHHHHH-HhcCCCEEECCCC
Confidence 3566777777666666 578888872 124456766666555 6789999999985
|
The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >TIGR01928 menC_lowGC/arch o-succinylbenzoic acid (OSB) synthetase | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00037 Score=66.63 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=65.9
Q ss_pred CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
..++=|+|.|++|.. -|-++. ..- .-|.|..+..+...+++.++|.|+ | ++.+-.++-+.|.
T Consensus 21 ~~~~lV~v~~~~G~~G~GE~~~-----------~~~---~~~~~~~~~~~~~~i~~~~~~~l~--g-~~~~~~~~~~~~~ 83 (324)
T TIGR01928 21 RDCLIIELIDDKGNAGFGEVVA-----------FQT---PWYTHETIATVKHIIEDFFEPNIN--K-EFEHPSEALELVR 83 (324)
T ss_pred CcEEEEEEEECCCCeEEEeccc-----------cCC---CCcCcccHHHHHHHHHHHHHHHhc--C-CCCCHHHHHHHHH
Confidence 466779999998864 333211 000 013333455566777888899998 7 7887777766664
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+. -+..++.|+-+|+.-+.++..|+|||+.|+
T Consensus 84 ~~~-------~~~~a~said~AlwDl~gk~~g~Pl~~llG 116 (324)
T TIGR01928 84 SLK-------GTPMAKAGLEMALWDMYHKLPSFSLAYGQG 116 (324)
T ss_pred Hcc-------CCcHHHHHHHHHHHHHHHhhhCCcHHHHhC
Confidence 331 133489999999999999999999999998
|
This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are low GC gram positive bacteria and archaea. Also included in the seed and in the model are enzymes with the com-name of N-acylamino acid racemase (or the more general term, racemase / racemase family), which refers to the enzyme's industrial application as racemases, and not to its biological function as o-succinylbenzoic acid synthetase. |
| >cd03324 rTSbeta_L-fuconate_dehydratase Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0011 Score=65.85 Aligned_cols=111 Identities=22% Similarity=0.208 Sum_probs=66.2
Q ss_pred ceeeEEEeEEe-------CCC----CCe---eEEEEEEECC-Cce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 2 PISKIHARQIF-------DSR----GNP---TVEVDLTTEL-GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 2 ~I~~v~ar~il-------Dsr----G~p---Tvevev~~~~-g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
+|++|..+.+= +.. -.| ++=|+|.|++ |.. -|-+.. +| .+....
T Consensus 2 kI~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~V~i~td~~G~~G~Ge~~~---~~-----------------~~~~~~ 61 (415)
T cd03324 2 KITALEVRDVRFPTSLELDGSDAMNPDPDYSAAYVVLRTDAAGLKGHGLTFT---IG-----------------RGNEIV 61 (415)
T ss_pred eEEEEEEEEEEeecCccCCCcccccCCCCceEEEEEEEecCCCCEEEEEecc---CC-----------------CchHHH
Confidence 67888877653 111 112 5668999998 875 443221 00 111112
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHH-HhhcCCC---Ccc-cCC--ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFM-IKLDGTE---NKS-KFG--ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L-~~lDgT~---nks-~lG--aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.. +.+.++|.|+ |.|+.+...+-+.| ..+.+.. ... +-| ..|+.|+-+|++=..++..|+|+|+.|+
T Consensus 62 ~~-~~~~lap~li--G~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~saiD~AlwDl~gK~~g~Pv~~LLG 135 (415)
T cd03324 62 CA-AIEALAHLVV--GRDLESIVADMGKFWRRLTSDSQLRWIGPEKGVIHLATAAVVNAVWDLWAKAEGKPLWKLLV 135 (415)
T ss_pred HH-HHHHHHHHhC--CCCHHHHHHHHHHHHHHhhccccceecCCcccHHHHHHHHHHHHHHHHhhhhcCCcHHHHhc
Confidence 22 3356999999 78898874332222 2222110 000 112 2589999999999999999999999998
|
rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03326 MR_like_1 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 1 | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0009 Score=65.77 Aligned_cols=165 Identities=21% Similarity=0.284 Sum_probs=93.9
Q ss_pred HHHHhHHHHHhcCCCCccch----------HHHHHHHHhhcCCCCccc--CCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQ----------KEIDEFMIKLDGTENKSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ----------~~ID~~L~~lDgT~nks~--lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.|++.++|.|+ |.||.+. ..+=+.|.. .+ .... ....|+.|+-||+.=+.++..|+|+|+.|+
T Consensus 60 ~i~~~~~p~Li--G~dp~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG 134 (385)
T cd03326 60 LLRERFIPRLL--AAAPDSLLDDAGGNLDPARAWAAMMR--NE-KPGGHGERAVAVGALDMAVWDAVAKIAGLPLYRLLA 134 (385)
T ss_pred HHHHHHHHHhc--CCChHHhhhcccccCCHHHHHHHHHh--cC-ccCCCCHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC
Confidence 37888999999 7888855 444343422 11 1111 123478999999999999999999999998
Q ss_pred hhhCCC---ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCC
Q psy12655 136 DLAGNS---NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDE 210 (299)
Q Consensus 136 ~l~g~~---~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgde 210 (299)
|.. ..+-.+|.-.. +|. . .| ..+..+.++ ..++.++ .|... ..+|
T Consensus 135 ---G~~~~~~~~~~v~~y~~--~~~-~-----------~~--~~~~~~~~~-------~a~~~~~--~Gf~~~Kikvg-- 184 (385)
T cd03326 135 ---RRYGRGQADPRVPVYAA--GGY-Y-----------YP--GDDLGRLRD-------EMRRYLD--RGYTVVKIKIG-- 184 (385)
T ss_pred ---CcccCCCCCCeEEEEEe--cCC-C-----------CC--CCCHHHHHH-------HHHHHHH--CCCCEEEEeCC--
Confidence 532 11223444332 221 0 11 123333322 2223332 24211 1232
Q ss_pred CCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCe
Q psy12655 211 GGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPI 290 (299)
Q Consensus 211 Ggfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPI 290 (299)
-.+.++.++.|...-+..| +++.|.+|+- ..+|.++-+.+...| ++|.+
T Consensus 185 ------~~~~~~di~~v~avRe~~G--~~~~l~vDaN----------------------~~w~~~~A~~~~~~l-~~~~~ 233 (385)
T cd03326 185 ------GAPLDEDLRRIEAALDVLG--DGARLAVDAN----------------------GRFDLETAIAYAKAL-APYGL 233 (385)
T ss_pred ------CCCHHHHHHHHHHHHHhcC--CCCeEEEECC----------------------CCCCHHHHHHHHHHh-hCcCC
Confidence 1234556666666656666 4789999961 124556655544444 67999
Q ss_pred eEeecCCC
Q psy12655 291 VSIEDPML 298 (299)
Q Consensus 291 vsiEDp~~ 298 (299)
.+||+|+.
T Consensus 234 ~~iEeP~~ 241 (385)
T cd03326 234 RWYEEPGD 241 (385)
T ss_pred CEEECCCC
Confidence 99999984
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown. |
| >TIGR03247 glucar-dehydr glucarate dehydratase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0018 Score=64.88 Aligned_cols=92 Identities=17% Similarity=0.159 Sum_probs=60.6
Q ss_pred CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
...+=|.|+|++|.. .|-++. +.++.. .++ .++|.|+ |.|+.+...|-+.|.
T Consensus 32 ~~~~iV~v~Td~Gi~G~GEa~~---------------------~~~~~~---~l~-~lap~Li--G~dp~~~e~i~~~m~ 84 (441)
T TIGR03247 32 FTRNIVILTDSSGNTGVGEVPG---------------------GEKIRA---TLE-DARPLVV--GKPLGEYQNVLNDVR 84 (441)
T ss_pred ceEEEEEEEECCCCeEEEeCCC---------------------cHHHHH---HHH-HHHHHhc--CCCHHHHHHHHHHHH
Confidence 456678888888865 443321 112332 234 5899999 789998888766664
Q ss_pred hhc------CCCCc---ccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 96 KLD------GTENK---SKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 96 ~lD------gT~nk---s~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
..- +..+- .+....|+-|+-||+.=..++..|+|||+.|+
T Consensus 85 ~~~~~~~~~~~g~~~~~~~~~~~A~aAIDiALWDl~gK~~g~Pl~~LLG 133 (441)
T TIGR03247 85 ATFADRDAGGRGLQTFDLRTTIHAVTAIESALLDLLGQHLGVPVAALLG 133 (441)
T ss_pred HHhhcccccccCcccccchhHHHHHHHHHHHHHHHhhhHcCCCHHHHhC
Confidence 421 00000 00112488999999999999999999999997
|
Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (, GenProp0716). The E. coli enzyme has been well-characterized. |
| >cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0099 Score=58.59 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=61.2
Q ss_pred CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCc-cc-hHHHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEV-TQ-QKEIDEF 93 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~-~d-Q~~ID~~ 93 (299)
.+++=|+|.|++|.. -+ |+ |.| ..++..+. .++|.|+ |.++ .+ ....+++
T Consensus 28 ~~~~~Vrv~td~G~~G~G-----------e~----------~~~---~~~~~~~~-~~~~~ll--g~~~~~~~~~~~~~~ 80 (395)
T cd03323 28 FTRNIVELTDDNGNTGVG-----------ES----------PGG---AEALEALL-EAARSLV--GGDVFGAYLAVLESV 80 (395)
T ss_pred ceEEEEEEEECCCCeecc-----------cc----------CCC---HHHHHHHH-HHhHHHh--CCCcchhhHHHHHHH
Confidence 377889999999863 22 11 111 12334443 4788888 5566 23 3445554
Q ss_pred HHhhcCCCCcccCC---------ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 94 MIKLDGTENKSKFG---------ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 94 L~~lDgT~nks~lG---------aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
...+-.. ..++-| ..|+.|+-+|+.=..++..|+|||+.|+ |....++|+
T Consensus 81 ~~~~~~~-~~~~~g~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---G~~r~~v~~ 139 (395)
T cd03323 81 RVAFADR-DAGGRGLQTFDLRTTVHVVTAFEVALLDLLGQALGVPVADLLG---GGQRDSVPF 139 (395)
T ss_pred HHHHhcc-cccccCccccchhHHHHHHHHHHHHHHHHhhhhcCCCHHHHhC---CCccCeEEE
Confidence 4433111 111112 4578999999999999999999999998 653334443
|
GlucD belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >PF02746 MR_MLE_N: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; InterPro: IPR013341 Mandelate racemase 5 | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0009 Score=54.41 Aligned_cols=91 Identities=21% Similarity=0.242 Sum_probs=66.1
Q ss_pred CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
++.|-|+|.|++|.. -|-+++. ++ ........+.+.+.|.|+ |.++.+...+.+.|.
T Consensus 26 ~~~v~V~l~t~~G~~G~Ge~~~~--~~------------------~~~~~~~~~~~~l~~~l~--g~~~~~~~~~~~~~~ 83 (117)
T PF02746_consen 26 REFVLVRLETDDGVVGWGEAFPS--PG------------------TAETVASALEDYLAPLLI--GQDPDDIEDIWQELY 83 (117)
T ss_dssp EEEEEEEEEETTSEEEEEEEESS--SS------------------SHHHHHHHHHHTHHHHHT--TSBTTGHHHHHHHHH
T ss_pred eEEEEEEEEECCCCEEEEEeeCC--cc------------------hhHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHH
Confidence 467889999999976 5544431 11 134455667788999998 788888777776664
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
..- .-..-|+-|+.+|+.=+.|+..|+|||++||
T Consensus 84 ~~~------~~~~~a~aaid~AlwDl~gK~~g~Pl~~LlG 117 (117)
T PF02746_consen 84 RLI------KGNPAAKAAIDMALWDLLGKIAGQPLYQLLG 117 (117)
T ss_dssp HHT------SSHHHHHHHHHHHHHHHHHHHHTSBHHHHTT
T ss_pred Hhc------cchHHHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 431 1134577899999999999999999999885
|
1.2.2 from EC (MR) and muconate lactonizing enzyme 5.5.1.1 from EC (MLE) are two bacterial enzymes involved in aromatic acid catabolism. They catalyse mechanistically distinct reactions yet they are related at the level of their primary, quaternary (homooctamer) and tertiary structures [, ]. A number of other proteins also seem to be evolutionary related to these two enzymes. These include, various plasmid-encoded chloromuconate cycloisomerases 5.5.1.7 from EC, Escherichia coli protein rspA [], E. coli bifunctional DGOA protein, E. coli hypothetical proteins ycjG, yfaW and yidU and a hypothetical protein from Streptomyces ambofaciens []. This entry represents the N-terminal region of these proteins.; PDB: 2OX4_F 3T9P_A 2QQ6_A 3CYJ_C 3GY1_A 3S47_B 3RRA_B 3RR1_A 3STP_A 3T8Q_A .... |
| >cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0018 Score=58.60 Aligned_cols=25 Identities=36% Similarity=0.507 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 111 ILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 111 ilavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+.|+.+|+.-+.++..|+|+|+.|+
T Consensus 44 ~~aid~Al~Dl~gk~~~~pl~~llg 68 (229)
T cd00308 44 ISGIDMALWDLAAKALGVPLAELLG 68 (229)
T ss_pred HHHHHHHHHHHhHhHcCCcHHHHcC
Confidence 8999999999999999999999998
|
Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase. |
| >PRK15129 L-Ala-D/L-Glu epimerase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.074 Score=50.81 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=42.4
Q ss_pred ccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 60 kgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.....+...++ .+.|.|+ .+.+ ...+++++ + ..-+..|+.+|+.-..++..++|||+.|+
T Consensus 53 ~~~~~~~~~l~-~~~~~l~-~~~~---~~~~~~~~----~-------~~~a~~aid~AlwDl~gk~~~~pl~~llG 112 (321)
T PRK15129 53 ESDASVMAQIM-SVVPQLE-KGLT---REALQKLL----P-------AGAARNAVDCALWDLAARQQQQSLAQLIG 112 (321)
T ss_pred CCHHHHHHHHH-HHHHHHh-CCCC---HHHHHhhc----c-------ChHHHHHHHHHHHHHHHHHcCCcHHHHcC
Confidence 45566666665 5889997 2332 23344432 1 12488999999999999999999999998
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.15 Score=58.99 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=27.3
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 106 FGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 106 lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.-..+..|+.||++-+.++..|+|||+.|+
T Consensus 1035 ~~psa~~ald~ALwDl~gk~~g~Pl~~LLG 1064 (1655)
T PLN02980 1035 IFPSVRCGLEMAILNAIAVRHGSSLLNILD 1064 (1655)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 345689999999999999999999999997
|
|
| >PRK05105 O-succinylbenzoate synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.92 Score=43.46 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDP 296 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp 296 (299)
++++-++.|...-+.. +++.|.+|+- ..+|.++-+.+...|-+. |+|.+||+|
T Consensus 140 ~~~~d~~~i~~vr~~~---~~~~l~vDaN----------------------~~w~~~~A~~~~~~l~~~~~~~i~~iEqP 194 (322)
T PRK05105 140 EAVRDGMLVNLLLEAI---PDLKLRLDAN----------------------RGWTLEKAQQFAKYVPPDYRHRIAFLEEP 194 (322)
T ss_pred CHHHHHHHHHHHHHhC---CCCeEEEECC----------------------CCCCHHHHHHHHHHhhhhcCCCccEEECC
Confidence 4455566555544332 4688888861 235667777777666442 889999999
Q ss_pred CC
Q psy12655 297 ML 298 (299)
Q Consensus 297 ~~ 298 (299)
+.
T Consensus 195 ~~ 196 (322)
T PRK05105 195 CK 196 (322)
T ss_pred CC
Confidence 84
|
|
| >cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.53 Score=43.39 Aligned_cols=119 Identities=17% Similarity=0.284 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHH
Q psy12655 111 ILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYH 190 (299)
Q Consensus 111 ilavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~ 190 (299)
+.|+.+|+.-+.++..|+|+|+.++ +. ...+|+ ...+ +. .+..+..+
T Consensus 45 ~~aid~Al~Dl~gk~~g~pv~~llG---~~-~~~i~~--~~~~------------------~~--~~~~~~~~------- 91 (265)
T cd03315 45 KAAVDMALWDLWGKRLGVPVYLLLG---GY-RDRVRV--AHML------------------GL--GEPAEVAE------- 91 (265)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHcC---CC-CCceEE--EEEe------------------cC--CCHHHHHH-------
Confidence 7899999999999999999998876 42 223443 2222 11 12222221
Q ss_pred HHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCC
Q psy12655 191 HLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDK 268 (299)
Q Consensus 191 ~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~ 268 (299)
.+++.++ .|... ..+|. ++++-++.+...-+..| .++.|.+|+-
T Consensus 92 ~~~~~~~--~G~~~~KiKvg~---------~~~~d~~~v~~vr~~~g--~~~~l~vDan--------------------- 137 (265)
T cd03315 92 EARRALE--AGFRTFKLKVGR---------DPARDVAVVAALREAVG--DDAELRVDAN--------------------- 137 (265)
T ss_pred HHHHHHH--CCCCEEEEecCC---------CHHHHHHHHHHHHHhcC--CCCEEEEeCC---------------------
Confidence 2233332 24211 12331 23566666665555544 3678888861
Q ss_pred CCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 269 SQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 269 ~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
..+|.++.+++.+.| ++|+|.+||+|+.
T Consensus 138 -~~~~~~~a~~~~~~l-~~~~i~~iEeP~~ 165 (265)
T cd03315 138 -RGWTPKQAIRALRAL-EDLGLDYVEQPLP 165 (265)
T ss_pred -CCcCHHHHHHHHHHH-HhcCCCEEECCCC
Confidence 124556777766655 5688999999984
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions. |
| >PF05034 MAAL_N: Methylaspartate ammonia-lyase N-terminus; InterPro: IPR022665 Methylaspartate ammonia-lyase 4 | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.16 Score=44.01 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=60.6
Q ss_pred eEEEEEEECCCce-EEEeecCCC--CcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGAS--TGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS--~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
+|-|.+++++|.+ ++-|-.--- .|-++.+-+ -..=+..|++.|+|.|+ |++.+.-++.=+.+-
T Consensus 52 sisV~l~L~dG~va~GDCaaVQYSGagGRDPLF~------------a~~~ip~ie~~v~p~L~--g~d~~~Fr~~a~~~d 117 (159)
T PF05034_consen 52 SISVMLVLEDGQVAYGDCAAVQYSGAGGRDPLFL------------AEDFIPVIEKEVAPRLV--GRDLSSFRENAEKFD 117 (159)
T ss_dssp EEEEEEEETTS-EEEEEE---TTTTSTTS-S---------------HHHHHHHHHHHTHHHHT--T-B-S-CHHHHHHHH
T ss_pred EEEEEEEeCCCCEEEeeehheeecccCCCCCccc------------HHHHHHHHHhhccHHHc--CCcHHHHHHHHHHHH
Confidence 6889999999987 554433211 133332222 23346778899999999 678777655444443
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
++ -+..+|..-.=.+||-|+..|+|++++.-.-+.|++
T Consensus 118 ~~---~~g~rlhtAiRYGvsQALL~A~A~a~~~tmaeVi~~ 155 (159)
T PF05034_consen 118 EL---VDGKRLHTAIRYGVSQALLDAAAKAQRTTMAEVIAE 155 (159)
T ss_dssp H----ETTEE--HHHHHHHHHHHHHHHHHHCTS-HHHHHHH
T ss_pred hc---ccCCcchhHHHHhHHHHHHHHHHHHcCCcHHHHHHH
Confidence 33 133478766669999999999999999887777764
|
3.1.2 from EC catalyses the second step of fermentation of glutamate. It is a homodimer. This domain represents the N-terminal region of methylaspartate ammonia-lyase. This domain is structurally related to PF03952 from PFAM []. This domain is associated with the catalytic domain PF07476 from PFAM. ; PDB: 1KKO_B 1KKR_A 3ZVI_A 1KD0_B 1KCZ_B 3ZVH_A. |
| >COG3799 Mal Methylaspartate ammonia-lyase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.92 Score=43.53 Aligned_cols=106 Identities=21% Similarity=0.332 Sum_probs=63.8
Q ss_pred HHHHHHHHHhHHHHHhcCCCCccc----hHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhh
Q psy12655 63 TKAVGFINNDIAPALLKESFEVTQ----QKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLA 138 (299)
Q Consensus 63 ~~Av~~in~~i~p~Li~~g~~~~d----Q~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~ 138 (299)
..-+..+|..+.|+|+ |.|+.- -+-++++ +|+ ..|--..=.+||-|+.+|+|...+.---+.+.+-.
T Consensus 87 ~~~~~~~~~~v~p~Lv--grDv~~~ldnA~vfe~l---~d~----~~LhtAvrYGvSQALl~Aaa~a~~tt~tevvcde~ 157 (410)
T COG3799 87 EHFIPFLNDHVKPLLV--GRDVDAFLDNARVFEKL---IDG----NLLHTAVRYGVSQALLDAAALATGTTKTEVVCDEW 157 (410)
T ss_pred hhhHHHHhhhhhhhhh--CccHHhhcchhHHhHhh---ccC----CcchHHHHhhHHHHHHHHHHHhhccchheeehhhh
Confidence 3446678999999999 566532 1222222 233 23444455899999999999999988777777655
Q ss_pred CCCccccccceEEeecCCcCC-CCcccceeEEEEecCCCC
Q psy12655 139 GNSNIILPVPAFNVINGGSHA-GNKLAMQEFMILPTGASS 177 (299)
Q Consensus 139 g~~~~~lP~P~~nvinGG~ha-~~~l~iQEfmiiP~ga~s 177 (299)
+.+..+-|+|+|---+.-..- -.++-++-+=++|.|-.+
T Consensus 158 ~lp~~te~vP~fgQSGd~R~~~vdkMiLK~vdVLPHgLiN 197 (410)
T COG3799 158 QLPRVTESVPLFGQSGDDRYIAVDKMILKGVDVLPHGLIN 197 (410)
T ss_pred CCCCccccccccccCcchhhhhHHHHHHhhcCccchhhhh
Confidence 555566777776322111111 013334555567766443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 299 | ||||
| 2psn_A | 434 | Crystal Structure Of Enolase1 Length = 434 | 1e-117 | ||
| 3b97_A | 433 | Crystal Structure Of Human Enolase 1 Length = 433 | 1e-116 | ||
| 1pdz_A | 434 | X-Ray Structure And Catalytic Mechanism Of Lobster | 1e-113 | ||
| 3ucc_A | 439 | Asymmetric Complex Of Human Neuron Specific Enolase | 1e-112 | ||
| 1te6_A | 439 | Crystal Structure Of Human Neuron Specific Enolase | 1e-112 | ||
| 3uje_A | 443 | Asymmetric Complex Of Human Neuron Specific Enolase | 1e-112 | ||
| 2xsx_A | 435 | Crystal Structure Of Human Beta Enolase Enob Length | 1e-110 | ||
| 1els_A | 436 | Catalytic Metal Ion Binding In Enolase: The Crystal | 2e-99 | ||
| 1ebg_A | 436 | Chelation Of Ser 39 To Mg2+ Latches A Gate At The A | 4e-99 | ||
| 2al2_A | 436 | Crystal Structure Analysis Of Enolase Mg Subunit Co | 4e-99 | ||
| 2xh7_A | 443 | Engineering The Enolase Active Site Pocket: Crystal | 4e-99 | ||
| 2al2_B | 436 | Crystal Structure Analysis Of Enolase Mg Subunit Co | 5e-99 | ||
| 1l8p_A | 436 | Mg-phosphonoacetohydroxamate Complex Of S39a Yeast | 7e-99 | ||
| 1p48_A | 436 | Reverse Protonation Is The Key To General Acid-Base | 8e-99 | ||
| 1p43_A | 436 | Reverse Protonation Is The Key To General Acid-Base | 8e-99 | ||
| 2xh4_A | 443 | Engineering The Enolase Active Site Pocket: Crystal | 1e-98 | ||
| 2xh2_A | 443 | Engineering The Enolase Active Site Pocket: Crystal | 1e-98 | ||
| 2xgz_A | 443 | Engineering The Enolase Active Site Pocket: Crystal | 1e-98 | ||
| 2xh0_A | 443 | Engineering The Enolase Active Site Pocket: Crystal | 6e-98 | ||
| 3qtp_A | 441 | Crystal Structure Analysis Of Entamoeba Histolytica | 5e-91 | ||
| 4g7f_A | 429 | Crystal Structure Of Enolase From Trypanosoma Cruzi | 1e-87 | ||
| 1oep_A | 432 | Structure Of Trypanosoma Brucei Enolase Reveals The | 8e-87 | ||
| 3otr_A | 452 | 2.75 Angstrom Crystal Structure Of Enolase 1 From T | 8e-87 | ||
| 2ptw_A | 432 | Crystal Structure Of The T. Brucei Enolase Complexe | 1e-86 | ||
| 4a3r_A | 430 | Crystal Structure Of Enolase From Bacillus Subtilis | 1e-70 | ||
| 1iyx_A | 432 | Crystal Structure Of Enolase From Enterococcus Hira | 8e-70 | ||
| 2pa6_A | 427 | Crystal Structure Of Mj0232 From Methanococcus Jann | 2e-69 | ||
| 3h8a_A | 432 | Crystal Structure Of E. Coli Enolase Bound To Its C | 7e-69 | ||
| 1e9i_A | 431 | Enolase From E.Coli Length = 431 | 8e-69 | ||
| 4ewj_A | 443 | Structure Of The Enloase From Streptococcus Suis Se | 4e-63 | ||
| 1w6t_A | 444 | Crystal Structure Of Octameric Enolase From Strepto | 1e-62 | ||
| 3tqp_A | 428 | Structure Of An Enolase (Eno) From Coxiella Burneti | 6e-58 | ||
| 3qn3_A | 417 | Phosphopyruvate Hydratase From Campylobacter Jejuni | 4e-57 | ||
| 3uj2_A | 449 | Crystal Structure Of An Enolase From Anaerostipes C | 9e-57 |
| >pdb|2PSN|A Chain A, Crystal Structure Of Enolase1 Length = 434 | Back alignment and structure |
|
| >pdb|3B97|A Chain A, Crystal Structure Of Human Enolase 1 Length = 433 | Back alignment and structure |
|
| >pdb|1PDZ|A Chain A, X-Ray Structure And Catalytic Mechanism Of Lobster Enolase Length = 434 | Back alignment and structure |
|
| >pdb|3UCC|A Chain A, Asymmetric Complex Of Human Neuron Specific Enolase-1-PgaPEP Length = 439 | Back alignment and structure |
|
| >pdb|1TE6|A Chain A, Crystal Structure Of Human Neuron Specific Enolase At 1.8 Angstrom Length = 439 | Back alignment and structure |
|
| >pdb|3UJE|A Chain A, Asymmetric Complex Of Human Neuron Specific Enolase-3-PgaPEP Length = 443 | Back alignment and structure |
|
| >pdb|2XSX|A Chain A, Crystal Structure Of Human Beta Enolase Enob Length = 435 | Back alignment and structure |
|
| >pdb|1ELS|A Chain A, Catalytic Metal Ion Binding In Enolase: The Crystal Structure Of Enolase-Mn2+-Phosphonoacetohydroxamate Complex At 2.4 Angstroms Resolution Length = 436 | Back alignment and structure |
|
| >pdb|1EBG|A Chain A, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of Yeast Enolase And The Intermediate Analog Phosphonoacetohydroxamate At 2.1 Angstroms Resolution Length = 436 | Back alignment and structure |
|
| >pdb|2AL2|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex At Ph 8.0 Length = 436 | Back alignment and structure |
|
| >pdb|2XH7|A Chain A, Engineering The Enolase Active Site Pocket: Crystal Structure Of The D321a Mutant Of Yeast Enolase 1 Length = 443 | Back alignment and structure |
|
| >pdb|2AL2|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex At Ph 8.0 Length = 436 | Back alignment and structure |
|
| >pdb|1L8P|A Chain A, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase 1 Length = 436 | Back alignment and structure |
|
| >pdb|1P48|A Chain A, Reverse Protonation Is The Key To General Acid-Base Catalysis In Enolase Length = 436 | Back alignment and structure |
|
| >pdb|1P43|A Chain A, Reverse Protonation Is The Key To General Acid-Base Catalysis In Enolase Length = 436 | Back alignment and structure |
|
| >pdb|2XH4|A Chain A, Engineering The Enolase Active Site Pocket: Crystal Structure Of The S39a D321a Mutant Of Yeast Enolase 1 Length = 443 | Back alignment and structure |
|
| >pdb|2XH2|A Chain A, Engineering The Enolase Active Site Pocket: Crystal Structure Of The S39n D321a Mutant Of Yeast Enolase 1 Length = 443 | Back alignment and structure |
|
| >pdb|2XGZ|A Chain A, Engineering The Enolase Active Site Pocket: Crystal Structure Of The S39n D321r Mutant Of Yeast Enolase 1 Length = 443 | Back alignment and structure |
|
| >pdb|2XH0|A Chain A, Engineering The Enolase Active Site Pocket: Crystal Structure Of The S39n Q167k D321r Mutant Of Yeast Enolase 1 Length = 443 | Back alignment and structure |
|
| >pdb|3QTP|A Chain A, Crystal Structure Analysis Of Entamoeba Histolytica Enolase Length = 441 | Back alignment and structure |
|
| >pdb|4G7F|A Chain A, Crystal Structure Of Enolase From Trypanosoma Cruzi Length = 429 | Back alignment and structure |
|
| >pdb|1OEP|A Chain A, Structure Of Trypanosoma Brucei Enolase Reveals The Inhibitory Divalent Metal Site Length = 432 | Back alignment and structure |
|
| >pdb|3OTR|A Chain A, 2.75 Angstrom Crystal Structure Of Enolase 1 From Toxoplasma Gondii Length = 452 | Back alignment and structure |
|
| >pdb|2PTW|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With Sulphate, Identification Of A Metal Binding Site Iv Length = 432 | Back alignment and structure |
|
| >pdb|4A3R|A Chain A, Crystal Structure Of Enolase From Bacillus Subtilis. Length = 430 | Back alignment and structure |
|
| >pdb|1IYX|A Chain A, Crystal Structure Of Enolase From Enterococcus Hirae Length = 432 | Back alignment and structure |
|
| >pdb|2PA6|A Chain A, Crystal Structure Of Mj0232 From Methanococcus Jannaschii Length = 427 | Back alignment and structure |
|
| >pdb|3H8A|A Chain A, Crystal Structure Of E. Coli Enolase Bound To Its Cognate Rnase E Recognition Domain Length = 432 | Back alignment and structure |
|
| >pdb|1E9I|A Chain A, Enolase From E.Coli Length = 431 | Back alignment and structure |
|
| >pdb|4EWJ|A Chain A, Structure Of The Enloase From Streptococcus Suis Serotype 2 Length = 443 | Back alignment and structure |
|
| >pdb|1W6T|A Chain A, Crystal Structure Of Octameric Enolase From Streptococcus Pneumoniae Length = 444 | Back alignment and structure |
|
| >pdb|3TQP|A Chain A, Structure Of An Enolase (Eno) From Coxiella Burnetii Length = 428 | Back alignment and structure |
|
| >pdb|3QN3|A Chain A, Phosphopyruvate Hydratase From Campylobacter Jejuni. Length = 417 | Back alignment and structure |
|
| >pdb|3UJ2|A Chain A, Crystal Structure Of An Enolase From Anaerostipes Caccae (Efi Target Efi-502054) With Bound Mg And Sulfate Length = 449 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| 2al1_A | 436 | Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: | 0.0 | |
| 2akz_A | 439 | Gamma enolase, neural; fluoride inhibition, negati | 0.0 | |
| 3qtp_A | 441 | Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Ent | 0.0 | |
| 2ptz_A | 432 | Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypano | 0.0 | |
| 3otr_A | 452 | Enolase; structural genomics, center for structura | 0.0 | |
| 2pa6_A | 427 | Enolase; glycolysis, lyase, magnesium, metal-bindi | 0.0 | |
| 1w6t_A | 444 | Enolase; bacterial infection, surface protein, moo | 1e-156 | |
| 2fym_A | 431 | Enolase; RNA degradosome, enolase, lyase; 1.60A {E | 1e-156 | |
| 3tqp_A | 428 | Enolase; energy metabolism, lyase; 2.20A {Coxiella | 1e-154 | |
| 3qn3_A | 417 | Enolase; structural genomics, center for structura | 1e-152 | |
| 3uj2_A | 449 | Enolase 1; enzyme function initiative, EFI, lyase; | 1e-151 | |
| 1kcz_A | 413 | Beta-methylaspartase; beta zigzag, alpha/beta-barr | 3e-05 | |
| 1kko_A | 413 | 3-methylaspartate ammonia-lyase; enolase superfami | 6e-04 |
| >2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ... Length = 436 | Back alignment and structure |
|---|
Score = 573 bits (1479), Expect = 0.0
Identities = 187/297 (62%), Positives = 236/297 (79%), Gaps = 2/297 (0%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
+SK++AR ++DSRGNPTVEV+LTTE G+FR+ VPSGASTG++EALE+RD DK+ + GKGV
Sbjct: 2 VSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGV 61
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
AV +N+ IAPA +K + +V QK +D+F+I LDGT NKSK GANAILGVSLA ++A
Sbjct: 62 LHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAA 121
Query: 123 AAKKGVPLYKHLADLAGN--SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AA+K VPLYKHLADL+ + S +LPVP NV+NGGSHAG LA+QEFMI PTGA +F+E
Sbjct: 122 AAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAE 181
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
A++IGSEVYH+LK + ++G A VGDEGG APNI +E L LIV+AI+ AG+ GKV
Sbjct: 182 ALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKV 241
Query: 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+IG+D A+SEFFK+G+YDLDFKNPNSDKS+WL +L LY +K YPIVSIEDP
Sbjct: 242 KIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPF 298
|
| >2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A Length = 439 | Back alignment and structure |
|---|
Score = 572 bits (1476), Expect = 0.0
Identities = 209/295 (70%), Positives = 249/295 (84%), Gaps = 1/295 (0%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
I KI AR+I DSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRD DK Y GKGV
Sbjct: 2 IEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGV 61
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
KAV IN+ IAPAL+ V +Q+++D M++LDGTENKSKFGANAILGVSLAV KAG
Sbjct: 62 LKAVDHINSTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAG 121
Query: 123 AAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAM 182
AA++ +PLY+H+A LAGNS++ILPVPAFNVINGGSHAGNKLAMQEFMILP GA SF +AM
Sbjct: 122 AAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAM 181
Query: 183 KIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEI 242
++G+EVYH LK VI K+G DAT VGDEGGFAPNIL+N E L L+ EAI+KAGYT K+ I
Sbjct: 182 RLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVI 241
Query: 243 GMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
GMDVAASEF+++G+YDLDFK+P +D S+++ D+L ALYQ+F+++YP+VSIEDP
Sbjct: 242 GMDVAASEFYRDGKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPF 295
|
| >3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica} Length = 441 | Back alignment and structure |
|---|
Score = 559 bits (1443), Expect = 0.0
Identities = 181/301 (60%), Positives = 220/301 (73%), Gaps = 6/301 (1%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+HAR+I DSRGNPT+EV++TT G+FR+ VPSGASTG++EA+ELRD DK Y GK
Sbjct: 6 MSIQKVHAREILDSRGNPTIEVEITTGKGMFRSCVPSGASTGVHEAVELRDGDKKRYGGK 65
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV +N I PALL V Q E+DE MIKLDGT NK K GANAILG S+++ +
Sbjct: 66 GVLKAVENVNTIIGPALLG--KNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICR 123
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
A AA+KG+PLYK+LA+L G+ + +PVP FNVINGG+HAGN LAMQEFMI PTGA++F E
Sbjct: 124 AAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAGNALAMQEFMICPTGATNFHE 183
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
A+++ +E Y LK VI K+G DAT VGDEGGFAPN+ +E L L+VEAI KAGYTGK+
Sbjct: 184 ALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYTGKI 243
Query: 241 EIGMDVAASEFFKE--GQYDLDFKNP--NSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
EI MD AASEF+ E +YDL K P D S D L A Y ++ K YPI SIEDP
Sbjct: 244 EIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDP 303
Query: 297 M 297
Sbjct: 304 F 304
|
| >2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A Length = 432 | Back alignment and structure |
|---|
Score = 550 bits (1419), Expect = 0.0
Identities = 173/299 (57%), Positives = 217/299 (72%), Gaps = 7/299 (2%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+H R++ DSRGNPTVEV++TTE G+FR+AVPSGASTG+YEA ELRD DK Y GK
Sbjct: 4 MTIQKVHGREVLDSRGNPTVEVEVTTEKGVFRSAVPSGASTGVYEACELRDGDKKRYVGK 63
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
G +AV +N I PAL+ + +Q+E+D M++LDGT NK K GANAILG S+A++K
Sbjct: 64 GCLQAVKNVNEVIGPALIG--RDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISK 121
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
A AA KGVPLY++LA LAG + LPVP FNVINGG HAGN L QEFMI P A+SFSE
Sbjct: 122 AAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHAGNALPFQEFMIAPVKATSFSE 181
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
A+++GSEVYH L+ +I K+G DA VGDEGGFAP I D E L +++EAIE+AG+ GK
Sbjct: 182 ALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKF 241
Query: 241 EIGMDVAASEFFKEG--QYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
I MD AASE + E QY+L FK+P W+ A++L Y ++ +YPIVSIEDP
Sbjct: 242 AICMDCAASETYDEKKQQYNLTFKSPE---PTWVTAEQLRETYCKWAHDYPIVSIEDPY 297
|
| >3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii} Length = 452 | Back alignment and structure |
|---|
Score = 547 bits (1412), Expect = 0.0
Identities = 178/307 (57%), Positives = 225/307 (73%), Gaps = 12/307 (3%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
+ I I AR+I DSRGNPT+EVD++TE G+FRAAVPSGASTGIYEALELRD D Y GK
Sbjct: 2 VVIKDIVAREILDSRGNPTIEVDVSTEGGVFRAAVPSGASTGIYEALELRDKDPKRYLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI-KLDGTEN-----KSKFGANAILGV 114
GV AV + +I PALL + QK ID M+ +LDGT+N KSK GANAILGV
Sbjct: 62 GVLNAVEIVRQEIKPALLG--KDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGV 119
Query: 115 SLAVAKAGAAKKGVPLYKHLADLAGNS--NIILPVPAFNVINGGSHAGNKLAMQEFMILP 172
S+A +AGAA KG+PLYK++A LAG + +++PVP FNVINGG HAGN LA+QEF+I P
Sbjct: 120 SIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVINGGEHAGNGLALQEFLIAP 179
Query: 173 TGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIE 232
GA + EA++ GSE YHHLK VI K+GLDAT VGDEGGFAPN+ +E L L+VEAI+
Sbjct: 180 VGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIK 239
Query: 233 KAGYTGKVEIGMDVAASEFFKE--GQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPI 290
AGY GK++I D AASEF+K+ +YDLD+K + S+ L +KL +Y+ ++K+YPI
Sbjct: 240 AAGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPI 299
Query: 291 VSIEDPM 297
+S+EDP
Sbjct: 300 ISVEDPF 306
|
| >2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii} Length = 427 | Back alignment and structure |
|---|
Score = 506 bits (1305), Expect = 0.0
Identities = 157/298 (52%), Positives = 204/298 (68%), Gaps = 15/298 (5%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHG 59
I I AR++ DSRGNPTVEV++ T+ A VPSGASTG +EALELRD +K + G
Sbjct: 9 FEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEKR-FGG 67
Query: 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVA 119
KGV AV +N+ I P +L ++ Q+EID MI+LDGT NKS+ GANAIL VSLAVA
Sbjct: 68 KGVLMAVENVNSIIRPEILG--YDARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVA 125
Query: 120 KAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFS 179
KA AA +PLYK+L G ++ ++PVP NVINGG HAGN L +QEFMI+P GA+S S
Sbjct: 126 KAAAATAKIPLYKYLG---GFNSYVMPVPMMNVINGGKHAGNDLDLQEFMIMPVGATSIS 182
Query: 180 EAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239
EA+++GSEVYH LK VI K+G +A VGDEGGFAP + ++E L L+ E+++KAGY +
Sbjct: 183 EAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDE 242
Query: 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
V +D AASEF+K+G Y ++ K L ++L Y+ + EYPIVSIEDP
Sbjct: 243 VVFALDAAASEFYKDGYYYVEGK--------KLTREELLDYYKALVDEYPIVSIEDPF 292
|
| >1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A Length = 444 | Back alignment and structure |
|---|
Score = 441 bits (1138), Expect = e-156
Identities = 143/298 (47%), Positives = 197/298 (66%), Gaps = 10/298 (3%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I+ ++AR++ DSRGNPT+EV++ TE G F R VPSGASTG +EA+ELRD DK+ Y G G
Sbjct: 14 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLG 73
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
KAV +NN IA A++ ++V Q+ ID MI LDGT NK K GANAILGVS+AVA+A
Sbjct: 74 TQKAVDNVNNIIAEAII--GYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARA 131
Query: 122 GAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEA 181
A +PLY +L +LP P N+INGGSH+ +A QEFMILP GA +F EA
Sbjct: 132 AADYLEIPLYSYLGGFNTK---VLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEA 188
Query: 182 MKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-GK- 239
++ G+E++H LKK++ ++ GL TAVGDEGGFAP ++G+ I+ AIE AGY GK
Sbjct: 189 LRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGKD 246
Query: 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
V +G D A+SEF+ + + D+ + + + + +E + +YPI++IED M
Sbjct: 247 VFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGM 304
|
| >2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A Length = 431 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-156
Identities = 162/299 (54%), Positives = 205/299 (68%), Gaps = 13/299 (4%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I KI R+I DSRGNPTVE ++ E G AA PSGASTG EALELRD DK+ + GKG
Sbjct: 3 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKG 62
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
VTKAV +N IA AL+ + Q ID+ MI LDGTENKSKFGANAIL VSLA AKA
Sbjct: 63 VTKAVAAVNGPIAQALI--GKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKA 120
Query: 122 GAAKKGVPLYKHLADLAGNSNI-ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
AA KG+PLY+H+A+L G +PVP N+INGG HA N + +QEFMI P GA + E
Sbjct: 121 AAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKE 180
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-GK 239
A+++GSEV+HHL KV+ K G+ TAVGDEGG+APN+ N E L +I EA++ AGY GK
Sbjct: 181 AIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGK 238
Query: 240 -VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ + MD AASEF+K+G+Y L + ++ +++ T +E K+YPIVSIED +
Sbjct: 239 DITLAMDCAASEFYKDGKYVLA-----GEGNKAFTSEEFTHFLEELTKQYPIVSIEDGL 292
|
| >3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii} Length = 428 | Back alignment and structure |
|---|
Score = 436 bits (1125), Expect = e-154
Identities = 144/298 (48%), Positives = 196/298 (65%), Gaps = 17/298 (5%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I+ I+A +I DSR NPT+EV +T + AAVPSGASTG EA+ELRDND Y GKG
Sbjct: 5 ITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKG 64
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V +AV +N I ALL + Q+EID MI+LDGTENK+ GANAILGVSLAVA A
Sbjct: 65 VLQAVENVNGPIRDALL--GQDPRSQEEIDRIMIELDGTENKANLGANAILGVSLAVAYA 122
Query: 122 GAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEA 181
A +PLY++L +PVP N+INGG+HA N L QEFMI+P GA +F+EA
Sbjct: 123 AANNADLPLYRYLGGD--GGPFSMPVPMMNIINGGAHATNNLDFQEFMIVPVGAPTFAEA 180
Query: 182 MKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-GK- 239
++ G+EV+H LKK + ++ GL +AVGDEGGFAP++ +N+ LI+EAIE A Y GK
Sbjct: 181 LRYGAEVFHALKKRLVSR-GL-MSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPGKD 238
Query: 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ + +D A+SE ++ G+YD + L ++++ E+ K+YP++SIED +
Sbjct: 239 IYLALDAASSELYQNGRYDFENNQ--------LTSEEMIDRLTEWTKKYPVISIEDGL 288
|
| >3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni} Length = 417 | Back alignment and structure |
|---|
Score = 431 bits (1112), Expect = e-152
Identities = 139/296 (46%), Positives = 191/296 (64%), Gaps = 17/296 (5%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I + A ++ DSRGNPTV+ ++T G A VPSGASTG EALELRDND+ + GKG
Sbjct: 7 IEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDNDE-RFGGKG 65
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IA +L + Q ++D+ + +LDGT N S GANA LGVS+A A+A
Sbjct: 66 VLKAVANVNETIADEIL--GLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARA 123
Query: 122 GAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEA 181
AA G+PLY++L G + ILPVP N+INGG+HA N + QEFMI+P G +SF EA
Sbjct: 124 AAAALGMPLYRYLG---GANASILPVPMCNIINGGAHANNNVDFQEFMIMPFGFTSFKEA 180
Query: 182 MKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVE 241
++ E+Y LKK + G +TA+GDEGGFAPN+ +N E + L++ I+KAGY +V+
Sbjct: 181 LRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRVK 238
Query: 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
I +DVA++EFFK+G+Y ++ K ++ L Y E +YPI SIED +
Sbjct: 239 IALDVASTEFFKDGKYHMEGKA--------FSSEALIERYVELCAKYPICSIEDGL 286
|
| >3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae} Length = 449 | Back alignment and structure |
|---|
Score = 431 bits (1111), Expect = e-151
Identities = 139/300 (46%), Positives = 193/300 (64%), Gaps = 14/300 (4%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHG 59
+ I K+ R+I DSRGNPTVE ++ G+ R PSGASTG +EALELRD DK + G
Sbjct: 26 LEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGG 85
Query: 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVA 119
KGVTKAV IN +I+ L + + +D MI DGT++KSKFGANA+L VS+A A
Sbjct: 86 KGVTKAVQNINTEISEILS--GMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACA 143
Query: 120 KAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFS 179
KA AA GVPLY+ L L N LPVP N++NGG+HA N + +QEFMI+P GA SF
Sbjct: 144 KAAAAALGVPLYRFLGGLNAN---RLPVPMMNILNGGAHAANTVDVQEFMIMPVGAESFR 200
Query: 180 EAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-G 238
EA++ +EV+H L ++ +K GL AT+VGDEGGFAP++ ++E + I+EA++ AGY G
Sbjct: 201 EALRQCTEVFHALAGLLKSK-GL-ATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPG 258
Query: 239 K-VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ + MD A+SE+ E + + + +++L A ++ + YPIVSIED +
Sbjct: 259 RDFVLAMDAASSEWKGEKKGEYILPKCKRKFA----SEELVAHWKSLCERYPIVSIEDGL 314
|
| >1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A Length = 413 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 3e-05
Identities = 37/242 (15%), Positives = 65/242 (26%), Gaps = 50/242 (20%)
Query: 19 TVEVDLTTELGLF---RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75
++ V L E G A + G + L L + + I +IAP
Sbjct: 52 SISVLLVLEDGQVAHGDCAAVQYSGAGGRDPLFLAKD------------FIPVIEKEIAP 99
Query: 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAI-LGVSLAVAKAGAAKKGVPLYKHL 134
L+ + D AI G++ A+ A A + V + + +
Sbjct: 100 KLIGREIT-----NFKPMAEEFDKMTVNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVI 154
Query: 135 ADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKK 194
D I VP F ++ + MI +K + H L
Sbjct: 155 RDEYNPGAEINAVPVF-----AQSGDDRYDNVDKMI-----------IKEADVLPHALIN 198
Query: 195 VINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKE 254
+ K GL + E ++ + + I K +
Sbjct: 199 NVEEKLGLKGEKL-------------LEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGA 245
Query: 255 GQ 256
Sbjct: 246 AF 247
|
| >1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A* Length = 413 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 6e-04
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 22/145 (15%)
Query: 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAI-LGVSLAVAKAGAA 124
+ F+N+ I P L + D A+ G+S A+ A A
Sbjct: 90 IPFLNDHIKPLLEGRDVD-----AFLPNARFFDKLRIDGNLLHTAVRYGLSQALLDATAL 144
Query: 125 KKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKI 184
G + + D + +P F G ++ + MIL K
Sbjct: 145 ASGRLKTEVVCDEWQLPCVPEAIPLF-----GQSGDDRYIAVDKMIL-----------KG 188
Query: 185 GSEVYHHLKKVINTKFGLDATAVGD 209
+ H L + K G + +
Sbjct: 189 VDVLPHALINNVEEKLGFKGEKLRE 213
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| 3qtp_A | 441 | Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Ent | 100.0 | |
| 3otr_A | 452 | Enolase; structural genomics, center for structura | 100.0 | |
| 3qn3_A | 417 | Enolase; structural genomics, center for structura | 100.0 | |
| 3tqp_A | 428 | Enolase; energy metabolism, lyase; 2.20A {Coxiella | 100.0 | |
| 3uj2_A | 449 | Enolase 1; enzyme function initiative, EFI, lyase; | 100.0 | |
| 2al1_A | 436 | Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: | 100.0 | |
| 2akz_A | 439 | Gamma enolase, neural; fluoride inhibition, negati | 100.0 | |
| 2ptz_A | 432 | Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypano | 100.0 | |
| 2fym_A | 431 | Enolase; RNA degradosome, enolase, lyase; 1.60A {E | 100.0 | |
| 1w6t_A | 444 | Enolase; bacterial infection, surface protein, moo | 100.0 | |
| 2pa6_A | 427 | Enolase; glycolysis, lyase, magnesium, metal-bindi | 100.0 | |
| 2qq6_A | 410 | Mandelate racemase/muconate lactonizing enzyme- li | 99.93 | |
| 2ox4_A | 403 | Putative mandelate racemase; enolase, dehydratase, | 99.9 | |
| 2gl5_A | 410 | Putative dehydratase protein; structural genomics, | 99.86 | |
| 2o56_A | 407 | Putative mandelate racemase; dehydratase, structur | 99.85 | |
| 2poz_A | 392 | Putative dehydratase; octamer, structural genomics | 99.83 | |
| 1kko_A | 413 | 3-methylaspartate ammonia-lyase; enolase superfami | 99.71 | |
| 2p3z_A | 415 | L-rhamnonate dehydratase; enolase, structural geno | 99.7 | |
| 2pp0_A | 398 | L-talarate/galactarate dehydratase; enolase superf | 99.7 | |
| 3bjs_A | 428 | Mandelate racemase/muconate lactonizing enzyme; en | 99.69 | |
| 2qgy_A | 391 | Enolase from the environmental genome shotgun sequ | 99.69 | |
| 3cyj_A | 372 | Mandelate racemase/muconate lactonizing enzyme-LI | 99.68 | |
| 2pge_A | 377 | MENC; OSBS, NYSGXRC, PSI-II, structural genomics, | 99.65 | |
| 1wue_A | 386 | Mandelate racemase/muconate lactonizing enzyme FA | 99.64 | |
| 1rvk_A | 382 | Isomerase/lactonizing enzyme; enolase superfamily, | 99.64 | |
| 2ps2_A | 371 | Putative mandelate racemase/muconate lactonizing e | 99.64 | |
| 2qde_A | 397 | Mandelate racemase/muconate lactonizing enzyme FA | 99.62 | |
| 1wuf_A | 393 | Hypothetical protein LIN2664; structural genomics, | 99.62 | |
| 3p3b_A | 392 | Mandelate racemase/muconate lactonizing protein; e | 99.61 | |
| 2p8b_A | 369 | Mandelate racemase/muconate lactonizing enzyme fam | 99.61 | |
| 1tzz_A | 392 | Hypothetical protein L1841; structural genomics, m | 99.61 | |
| 4hnl_A | 421 | Mandelate racemase/muconate lactonizing enzyme; de | 99.6 | |
| 2zad_A | 345 | Muconate cycloisomerase; muconate lactonizing enzy | 99.6 | |
| 1tkk_A | 366 | Similar to chloromuconate cycloisomerase; epimeras | 99.6 | |
| 2ovl_A | 371 | Putative racemase; structural genomics, PSI-2, pro | 99.59 | |
| 2qdd_A | 378 | Mandelate racemase/muconate lactonizing enzyme; en | 99.58 | |
| 1kcz_A | 413 | Beta-methylaspartase; beta zigzag, alpha/beta-barr | 99.57 | |
| 1nu5_A | 370 | Chloromuconate cycloisomerase; enzyme, dehalogenat | 99.57 | |
| 2nql_A | 388 | AGR_PAT_674P, isomerase/lactonizing enzyme; enolas | 99.55 | |
| 1sjd_A | 368 | N-acylamino acid racemase; lyase, isomerase; HET: | 99.55 | |
| 2og9_A | 393 | Mandelate racemase/muconate lactonizing enzyme; NY | 99.54 | |
| 2zc8_A | 369 | N-acylamino acid racemase; octamer, TIM beta/alpha | 99.54 | |
| 2pgw_A | 384 | Muconate cycloisomerase; enolase superfamily, octa | 99.53 | |
| 2oz8_A | 389 | MLL7089 protein; structural genomics, unknown func | 99.53 | |
| 1r0m_A | 375 | N-acylamino acid racemase; isomerase; 1.30A {Deino | 99.52 | |
| 1mdl_A | 359 | Mandelate racemase; isomerase, mandelate pathway, | 99.52 | |
| 2gdq_A | 382 | YITF; mandelate racemase/muconate lactonizing enzy | 99.51 | |
| 2rdx_A | 379 | Mandelate racemase/muconate lactonizing enzyme, P; | 99.46 | |
| 2hzg_A | 401 | Mandelate racemase/muconate lactonizing enzyme/EN | 99.44 | |
| 2hxt_A | 441 | L-fuconate dehydratase; enolase superfamily, D-ery | 99.4 | |
| 4hpn_A | 378 | Putative uncharacterized protein; enolase, enzyme | 99.04 | |
| 3rcy_A | 433 | Mandelate racemase/muconate lactonizing enzyme-LI | 98.96 | |
| 3jva_A | 354 | Dipeptide epimerase; enolase superfamily, isomeras | 98.95 | |
| 2chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Cupriavidus | 98.94 | |
| 4h2h_A | 376 | Mandelate racemase/muconate lactonizing enzyme; en | 98.91 | |
| 3dg3_A | 367 | Muconate cycloisomerase; muconate lactonizing enzy | 98.91 | |
| 4h83_A | 388 | Mandelate racemase/muconate lactonizing enzyme; st | 98.89 | |
| 4dwd_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 98.88 | |
| 3i4k_A | 383 | Muconate lactonizing enzyme; structural genomics, | 98.86 | |
| 3fcp_A | 381 | L-Ala-D/L-Glu epimerase, A muconate lactonizing en | 98.85 | |
| 4e4u_A | 412 | Mandalate racemase/muconate lactonizing enzyme; ma | 98.84 | |
| 4h1z_A | 412 | Enolase Q92ZS5; dehydratase, magnesium binding sit | 98.83 | |
| 4e5t_A | 404 | Mandelate racemase / muconate lactonizing enzyme, | 98.83 | |
| 3dgb_A | 382 | Muconate cycloisomerase; muconate lactonizing enzy | 98.82 | |
| 3sbf_A | 401 | Mandelate racemase / muconate lactonizing enzyme; | 98.81 | |
| 3stp_A | 412 | Galactonate dehydratase, putative; PSI biology, st | 98.8 | |
| 3t6c_A | 440 | RSPA, putative MAND family dehydratase; enolase, m | 98.8 | |
| 3ik4_A | 365 | Mandelate racemase/muconate lactonizing protein; s | 98.79 | |
| 3r0u_A | 379 | Enzyme of enolase superfamily; structural genomics | 98.77 | |
| 3v3w_A | 424 | Starvation sensing protein RSPA; enolase, enzyme f | 98.76 | |
| 3tj4_A | 372 | Mandelate racemase; enolase, dehydratase, enzyme f | 98.76 | |
| 3r4e_A | 418 | Mandelate racemase/muconate lactonizing enzyme; en | 98.74 | |
| 3gd6_A | 391 | Muconate cycloisomerase; structural genomics, NYSG | 98.74 | |
| 3tji_A | 422 | Mandelate racemase/muconate lactonizing enzyme, N | 98.74 | |
| 3sjn_A | 374 | Mandelate racemase/muconate lactonizing protein; e | 98.73 | |
| 3go2_A | 409 | Putative L-alanine-DL-glutamate epimerase; structu | 98.73 | |
| 3fv9_G | 386 | Mandelate racemase/muconate lactonizing enzyme; st | 98.73 | |
| 3toy_A | 383 | Mandelate racemase/muconate lactonizing enzyme FA | 98.73 | |
| 3i6e_A | 385 | Muconate cycloisomerase I; structural genomics, NY | 98.73 | |
| 3vcn_A | 425 | Mannonate dehydratase; enolase, magnesium binding | 98.72 | |
| 3u9i_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 98.71 | |
| 3ro6_B | 356 | Putative chloromuconate cycloisomerase; TIM barrel | 98.71 | |
| 3rr1_A | 405 | GALD, putative D-galactonate dehydratase; enolase, | 98.7 | |
| 3ugv_A | 390 | Enolase; enzyme function initiative, EFI, lyase; 2 | 98.7 | |
| 1jpd_X | 324 | L-Ala-D/L-Glu epimerase; enolase superfamily, muco | 98.7 | |
| 3eez_A | 378 | Putative mandelate racemase/muconate lactonizing e | 98.7 | |
| 3s5s_A | 389 | Mandelate racemase/muconate lactonizing enzyme FA | 98.66 | |
| 3q45_A | 368 | Mandelate racemase/muconate lactonizing enzyme FA | 98.66 | |
| 3mwc_A | 400 | Mandelate racemase/muconate lactonizing protein; e | 98.66 | |
| 3qld_A | 388 | Mandelate racemase/muconate lactonizing protein; s | 98.65 | |
| 4dye_A | 398 | Isomerase; enolase family protein, EFI, enzym func | 98.63 | |
| 3tcs_A | 388 | Racemase, putative; PSI-biology, nysgrc, structura | 98.62 | |
| 4e4f_A | 426 | Mannonate dehydratase; magnesium binding, enzyme f | 98.61 | |
| 1chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Ralstonia eu | 98.61 | |
| 3mqt_A | 394 | Mandelate racemase/muconate lactonizing protein; P | 98.6 | |
| 3dip_A | 410 | Enolase; structural genomics, isomerase, PSI-2, pr | 98.55 | |
| 4e8g_A | 391 | Enolase, mandelate racemase/muconate lactonizing e | 98.54 | |
| 3ddm_A | 392 | Putative mandelate racemase/muconate lactonizing e | 98.54 | |
| 3vdg_A | 445 | Probable glucarate dehydratase; enolase, magnesium | 98.53 | |
| 3mkc_A | 394 | Racemase; metabolic process, PSI2, NYSGXRC, struct | 98.52 | |
| 3vc5_A | 441 | Mandelate racemase/muconate lactonizing protein; d | 98.52 | |
| 3my9_A | 377 | Muconate cycloisomerase; structural genomics, PSI- | 98.52 | |
| 3v5c_A | 392 | Mandelate racemase/muconate lactonizing protein; e | 98.51 | |
| 3va8_A | 445 | Probable dehydratase; enolase, magnesium binding s | 98.45 | |
| 4dxk_A | 400 | Mandelate racemase / muconate lactonizing enzyme p | 98.44 | |
| 3ozy_A | 389 | Putative mandelate racemase; beta-alpha barrel, en | 98.43 | |
| 4a35_A | 441 | Mitochondrial enolase superfamily member 1; isomer | 98.38 | |
| 3fxg_A | 455 | Rhamnonate dehydratase; structural gemomics, enola | 98.31 | |
| 3p0w_A | 470 | Mandelate racemase/muconate lactonizing protein; s | 98.27 | |
| 3ekg_A | 404 | Mandelate racemase/muconate lactonizing enzyme; st | 98.27 | |
| 3mzn_A | 450 | Glucarate dehydratase; lyase, structural genomics, | 98.23 | |
| 3pfr_A | 455 | Mandelate racemase/muconate lactonizing protein; e | 98.18 | |
| 4g8t_A | 464 | Glucarate dehydratase; enolase, enzyme function IN | 98.08 | |
| 3ijl_A | 338 | Muconate cycloisomerase; enolase superfamily, dipe | 97.63 | |
| 2okt_A | 342 | OSB synthetase, O-succinylbenzoic acid synthetase; | 97.57 | |
| 4gfi_A | 329 | Mandelate racemase/muconate lactonizing enzyme FA | 96.64 | |
| 1r6w_A | 322 | OSB synthase, O-succinylbenzoate synthase, OSBS; e | 96.39 | |
| 3caw_A | 330 | O-succinylbenzoate synthase; structural genomics, | 91.52 | |
| 2ozt_A | 332 | TLR1174 protein; structural genomics, O-succinylbe | 85.37 |
| >3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-111 Score=826.60 Aligned_cols=297 Identities=61% Similarity=0.952 Sum_probs=287.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|.|++|+|||||||||||||||||+|++|.+||+||||||||.|||+||||+|++||+||||++||+|||++|+|+|+
T Consensus 6 m~I~~i~ar~ildsrGnptvev~v~~~~g~~ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~~vn~~iap~Li-- 83 (441)
T 3qtp_A 6 MSIQKVHAREILDSRGNPTIEVEITTGKGMFRSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALL-- 83 (441)
T ss_dssp TBCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--
T ss_pred cEEEEEEEEEEECCCCCEEEEEEEEECCCcEEEecccCCCCCcceeEeecCCCcccccCccHHHHHHHHHHHHHHHHh--
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|++++||++||++|++||||+|||+||+|||||||||+|||+|+.+++|||+||+++.|...++||+|||||||||+||+
T Consensus 84 g~~~~dQ~~iD~~m~~lDgT~nks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~~nvinGG~ha~ 163 (441)
T 3qtp_A 84 GKNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAG 163 (441)
T ss_dssp TCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEEEEEEECGGGCS
T ss_pred cCChhhHHHHHHHHHhccCCCCccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccceEeeecCCccCC
Confidence 89999999999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccce
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i 240 (299)
|+|+||||||+|+|+.||+|+|||++||||+||++|++|||...|+|||||||+|++++++|||++|++||+++||+++|
T Consensus 164 n~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i 243 (441)
T 3qtp_A 164 NALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYTGKI 243 (441)
T ss_dssp SSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHTCTTTC
T ss_pred CccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcCCCceE
Confidence 99999999999999999999999999999999999999999778999999999999999999999999999999999999
Q ss_pred EEEeeccccccccC--CceeeecCCC--CCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 241 EIGMDVAASEFFKE--GQYDLDFKNP--NSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 241 ~ialD~AAse~~~~--g~Y~~~fk~~--~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
.|||||||||||++ |+|+|.||+| ++++++++|++||+|||++|+++|||++|||||++
T Consensus 244 ~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~ 306 (441)
T 3qtp_A 244 EIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAE 306 (441)
T ss_dssp EEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred EEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcceeeecCCCCh
Confidence 99999999999975 8999999876 34455789999999999999999999999999986
|
| >3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-111 Score=824.71 Aligned_cols=296 Identities=60% Similarity=0.985 Sum_probs=287.9
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|+|||||||||||||||||+|++|.+||+||||||||.|||+||||+|++||+||||++||++||+.|+|+|+ |
T Consensus 3 ~I~~i~areildSrGnpTvEv~v~~~~G~~ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~Li--g 80 (452)
T 3otr_A 3 VIKDIVAREILDSRGNPTIEVDVSTEGGVFRAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALL--G 80 (452)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--T
T ss_pred cceEEEEEEEEcCCCCEEEEEEEEECCccEEEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHHc--C
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCccchHHHHHHHH-hhcCCCC-----cccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC--ccccccceEEee
Q psy12655 82 FEVTQQKEIDEFMI-KLDGTEN-----KSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS--NIILPVPAFNVI 153 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~-~lDgT~n-----ks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~--~~~lP~P~~nvi 153 (299)
+|++||++||++|+ +||||+| ||+||+|||||||||+|||+|..+++|||+||+++.|.. .+.||+||||||
T Consensus 81 ~d~~dQ~~iD~~m~~~lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~nvi 160 (452)
T 3otr_A 81 KDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVI 160 (452)
T ss_dssp CCTTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEEE
T ss_pred CChHhHHHHHHHHHHHhcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEEEe
Confidence 99999999999999 9999999 999999999999999999999999999999999998876 789999999999
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEK 233 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ 233 (299)
|||+||+|+|+||||||+|+|+.||+|+|||++||||+||++|++|||...|+|||||||+|++++++|||++|++||++
T Consensus 161 nGG~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai~~ 240 (452)
T 3otr_A 161 NGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKA 240 (452)
T ss_dssp ECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977899999999999999999999999999999
Q ss_pred cccccceEEEeeccccccc--cCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 234 AGYTGKVEIGMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 234 ag~~~~i~ialD~AAse~~--~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+||+++|.||||||||||| ++|+|+|.||+|++++++.+|++||+|||.+|+++|||++|||||+|
T Consensus 241 aGy~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~ 308 (452)
T 3otr_A 241 AGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQ 308 (452)
T ss_dssp HTCTTTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred cCCCceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCceEEecCCCh
Confidence 9999999999999999999 67999999998866666789999999999999999999999999986
|
| >3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-85 Score=640.01 Aligned_cols=282 Identities=49% Similarity=0.800 Sum_probs=272.8
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|+||+||||||||||||+|+|++|.+ ||+||||||||.|||+||||+| ++|+||||.+|+++||+.|+|.|+
T Consensus 6 ~i~~i~~r~i~dsrG~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~-~~y~gkgv~~av~~v~~~iap~Li-- 82 (417)
T 3qn3_A 6 VIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDND-ERFGGKGVLKAVANVNETIADEIL-- 82 (417)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCS-TGGGGTCCHHHHHHHHTHHHHHHT--
T ss_pred eeeEEEEEEEEcCCCCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCC-ccccCccHHHHHHHHHHHHHHHHC--
Confidence 599999999999999999999999999988 9999999999999999999999 799999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|+.+|.+||+.|.++|||+||+++|+|||+|||||+|+|+|+.+|+|||+||+ |....++|+||+|++|||.|++
T Consensus 83 G~d~~~~~~id~~m~~~dgt~~k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLG---G~~~~~lPv~~~nvinGG~ha~ 159 (417)
T 3qn3_A 83 GLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLG---GANASILPVPMCNIINGGAHAN 159 (417)
T ss_dssp TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---GGGCCEECEEEEEEEECGGGSS
T ss_pred CCCccCHHHHHHHHHHhhccCCCCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCcceeeeeeeeecCcccCC
Confidence 7999999999999999999999999999999999999999999999999999999 7666789999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccce
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i 240 (299)
|++++|||||+|.++.+|+|++++++|+||+||.+++++ |. .|+|||||||+|++++++++|++|.+||+++||+++|
T Consensus 160 ~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~k-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy~~dv 237 (417)
T 3qn3_A 160 NNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRV 237 (417)
T ss_dssp SSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTCTTTE
T ss_pred CcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhc-Cc-ccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999976 75 8999999999999999999999999999999999899
Q ss_pred EEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 241 ~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
.|++|+++||||++|+|+++ ++.+|++|++++|.+|+++|||++|||||++
T Consensus 238 ~l~vD~~ase~~~~g~y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~ 288 (417)
T 3qn3_A 238 KIALDVASTEFFKDGKYHME--------GKAFSSEALIERYVELCAKYPICSIEDGLAE 288 (417)
T ss_dssp EEEEECCGGGGEETTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEESSSCT
T ss_pred eEEEECCchhhccCCeeecC--------CCccCHHHHHHHHHHHHhhcceeEEecCCCc
Confidence 99999999999999999982 3578999999999999999999999999985
|
| >3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-84 Score=632.85 Aligned_cols=283 Identities=51% Similarity=0.823 Sum_probs=266.0
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|+||+||||||||||||+|+|++|.+ ||+||||+|||.|||+||||+|++||+||||.+|+++||+.|+|+|+
T Consensus 4 ~i~~~~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~Li-- 81 (428)
T 3tqp_A 4 TITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDALL-- 81 (428)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT--
T ss_pred eEEEEEEEEEEcCCCCCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHhc--
Confidence 599999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhC-CCccccccceEEeecCCcCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAG-NSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g-~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|++||+.|.++|||+||+++|+|||+|||||+|+|+|+.+|+|||+||+ | ....++|+|++|++|||.|+
T Consensus 82 G~d~~~~~~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~~~pvp~~~~inGG~ha 158 (428)
T 3tqp_A 82 GQDPRSQEEIDRIMIELDGTENKANLGANAILGVSLAVAYAAANNADLPLYRYLG---GDGGPFSMPVPMMNIINGGAHA 158 (428)
T ss_dssp TCCTTCHHHHHHHHHHHHCCTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---TTTCCCCBCEEEEEEEECC---
T ss_pred CCCccCHHHHHHHHHHhcCcCCcCccchhHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeeeEEEEEecCcccC
Confidence 7999999999999999999999999999999999999999999999999999999 8 65678999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-- 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~-- 237 (299)
+|++++|||||+|.++.+|+|++++..++||+||..|+++ |. .|+|||||||+|++++++++|++|.+||+++||+
T Consensus 159 ~~~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~agy~~G 236 (428)
T 3tqp_A 159 TNNLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSR-GL-MSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPG 236 (428)
T ss_dssp -CCCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBT
T ss_pred CCccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhccc-cc-ccccCCCCCcCCCcccHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999966 75 8999999999999999999999999999999998
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|.|++|+||||||++|+|+++ ++.+|++|++++|.+|+++|||++|||||++
T Consensus 237 ~dv~l~vD~aase~~~~g~Y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~ 290 (428)
T 3tqp_A 237 KDIYLALDAASSELYQNGRYDFE--------NNQLTSEEMIDRLTEWTKKYPVISIEDGLSE 290 (428)
T ss_dssp TTBEEEEECCGGGSEETTEECCS--------SSCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred CceEEEEecchhhhccCCceecc--------ccccCHHHHHHHHHHHHhhcccceEeCCCCc
Confidence 58999999999999999999982 3568999999999999999999999999975
|
| >3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-82 Score=620.94 Aligned_cols=286 Identities=49% Similarity=0.781 Sum_probs=271.0
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+||||||||||||+|+|++|.+ ||+||||+|||.|||+||||+|+.||+||||.+||++||+.|+|.|+
T Consensus 26 m~I~~i~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av~~v~~~iap~Li- 104 (449)
T 3uj2_A 26 LEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILS- 104 (449)
T ss_dssp TBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT-
T ss_pred eEEEEEEEEEEECCCCCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHHHHHHHHHHHHHc-
Confidence 7899999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|.+||+.|.++|||+||+++|+|||+|||||+|+|+|+.+|+|||+||+ |....+||+||+|++|||.|+
T Consensus 105 -G~d~~~~e~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~lpvp~~n~inGG~ha 180 (449)
T 3uj2_A 105 -GMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLG---GLNANRLPVPMMNILNGGAHA 180 (449)
T ss_dssp -TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---GGGCCBCCEECEEEEECSTTS
T ss_pred -cCCccCHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhC---CCCCCceeeeeEEEecCcccC
Confidence 7999999999999999999999999999999999999999999999999999999 766678999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-- 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~-- 237 (299)
+|++++|||||+|.++.+|+|++++..++||+||.+|+++ |. .|+|||||||+|++++++++|++|++||+++||+
T Consensus 181 ~~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~-g~-~t~vGdeggfap~~~~~~e~l~~i~~AIr~agy~~G 258 (449)
T 3uj2_A 181 ANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSK-GL-ATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPG 258 (449)
T ss_dssp SSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSCHHHHHHHHHHHHHHTTCCBT
T ss_pred CCccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhc-CC-ccccCCCCCcCCCccCHHHHHHHHHHHHHHhccccC
Confidence 9999999999999999999999999999999999999866 74 8999999999999999999999999999999998
Q ss_pred cceEEEeecccccccc--CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 GKVEIGMDVAASEFFK--EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 ~~i~ialD~AAse~~~--~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|.|++||+|||||+ +|+|+++ +.++.+|++|++++|.+|+++|||++|||||++
T Consensus 259 ~dv~l~vD~aase~~~~~~g~Y~l~------~~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~ 316 (449)
T 3uj2_A 259 RDFVLAMDAASSEWKGEKKGEYILP------KCKRKFASEELVAHWKSLCERYPIVSIEDGLDE 316 (449)
T ss_dssp TTBEEEEECCGGGCBCSSTTEEECT------TTCCEEEHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred CceEEEEEcchhhhccccCceeecc------CcccccCHHHHHHHHHHHHHhcCceEEECCCCc
Confidence 5899999999999997 5899983 334678999999999999999999999999974
|
| >2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-79 Score=600.78 Aligned_cols=297 Identities=62% Similarity=1.005 Sum_probs=281.4
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|++|+||||||||||+|+|+|++| + +|.+|||+|||.+||+||||+|+.+|.||||.+|+++||+.|+|.|+++
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKA 79 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHC
Confidence 4899999999999999999999999999 6 9999999999999999999999999999999999999999999999955
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC--ccccccceEEeecCCcC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS--NIILPVPAFNVINGGSH 158 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~--~~~lP~P~~nvinGG~h 158 (299)
|+|+.+|++||+.|.++|||+||+++|+||++|||||+|+|+|+.+|+|||+||++|.|.. ..++|+||+|++|||.|
T Consensus 80 G~d~~~~~~i~~~m~~~dgt~~~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~inGg~h 159 (436)
T 2al1_A 80 NIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSH 159 (436)
T ss_dssp TCCTTCHHHHHHHHHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEEEECGGG
T ss_pred CCChhhHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEeecCccc
Confidence 6899999999999999999999999999999999999999999999999999999888865 56899999999999999
Q ss_pred CCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHccccc
Q psy12655 159 AGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG 238 (299)
Q Consensus 159 a~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~ 238 (299)
++|+++||||||+|.++.+|+|+++++.++||+||.+|+.|+|...|+|||||||+|++++++++|+++++|++++||++
T Consensus 160 a~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~g 239 (436)
T 2al1_A 160 AGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDG 239 (436)
T ss_dssp SSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTT
T ss_pred cCCccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999988886558999999999999999999999999999999976
Q ss_pred ceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 239 KVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 239 ~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+|.|++|+|+||||++|+|++.|++++++.++.+|++|++++|.+|+++|||++|||||+|
T Consensus 240 ~v~l~vD~aase~~~n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~ 300 (436)
T 2al1_A 240 KVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAE 300 (436)
T ss_dssp TCEEEEECCGGGGEETTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred ceEEEEechhhhhccCCceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCC
Confidence 6999999999999999999987776544445678999999999999999999999999975
|
| >2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-78 Score=595.57 Aligned_cols=297 Identities=70% Similarity=1.121 Sum_probs=281.5
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|++|+||||||||||+|+|+|++|..||++|||+|||.+||+|+||+++.+|.|+||.+|+++||+.|+|+|+++|
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~G 80 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSG 80 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHC
T ss_pred CeeEEEEEEEEcCCCCceEEEEEEECCCceEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999999999998899999999999999999999998899999999999999999999999556
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCC
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGN 161 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~ 161 (299)
+|+.+|++||+.|.++|||+||+++|+||++|||||+++|+|+.+|+|||+||++++|....++|+||+|++|||.|++|
T Consensus 81 ~d~~~~~~i~~~m~~~dgt~~~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~inGg~ha~~ 160 (439)
T 2akz_A 81 LSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGN 160 (439)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEECGGGSSS
T ss_pred CChhhHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEecCcccccc
Confidence 89999999999999999999999999999999999999999999999999999988886666899999999999999999
Q ss_pred cccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceE
Q psy12655 162 KLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVE 241 (299)
Q Consensus 162 ~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ 241 (299)
+++||||||+|.++.+|+|+++++.++||+||.+|+.|+|...|+|||||||+|++++++++|++|++|++++||+++|.
T Consensus 161 ~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~G~~g~v~ 240 (439)
T 2akz_A 161 KLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIV 240 (439)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCTTTCE
T ss_pred ccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHcCCccceE
Confidence 99999999999999999999999999999999999988887558999999999999999999999999999999986699
Q ss_pred EEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 242 ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
|++|+|++|||++|+|++.+++| .+.++.+|++|++++|.+|+++|||++|||||++
T Consensus 241 l~vD~a~se~~~~g~y~l~~~~~-~~~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~ 297 (439)
T 2akz_A 241 IGMDVAASEFYRDGKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQ 297 (439)
T ss_dssp EEEECCGGGGEETTEECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred EEEechHhhhccCCeeEEecccc-ccccccCCHHHHHHHHHHHHHhCCCcEEECCCCc
Confidence 99999999999999999876655 3345678999999999999999999999999975
|
| >2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-69 Score=531.58 Aligned_cols=293 Identities=59% Similarity=0.944 Sum_probs=275.5
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+|+||||+|||+|+|+|++| . +|.+|||+|||.+||+|+||+++.+|.|+||.+|+++||+.|+|.|+
T Consensus 4 m~I~~i~~~~v~~~~~~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li- 81 (432)
T 2ptz_A 4 MTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALI- 81 (432)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEEecCCCCcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHHHHHHHHHHHHC-
Confidence 78999999999999999999999999999 7 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|++||+.|.++|+|+||+++|+||++|||||+++++|+..|+|||+||+++.|....++|+|++|++|||.|+
T Consensus 82 -G~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~~~~i~gg~~a 160 (432)
T 2ptz_A 82 -GRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHA 160 (432)
T ss_dssp -TCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEECSTTS
T ss_pred -CCChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeEEEEecCcccc
Confidence 8999999999999999999999999999999999999999999999999999999888765557999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~ 239 (299)
+|++++|||||+|.++.+++|++++..+.|++||..|++|+|...|++||||||+|++++++++++++.+||+++|++++
T Consensus 161 ~~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~G~~g~ 240 (432)
T 2ptz_A 161 GNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGK 240 (432)
T ss_dssp SSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTTCTTS
T ss_pred cCCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHhCCcCC
Confidence 99999999999999999999999999999999999998787864589999999999999999999999999999999767
Q ss_pred eEEEeeccccccccC--CceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFKE--GQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~~--g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+.|++|+++++||++ |+|++.++.+ .++.+|++||++||.+++++|||++|||||++
T Consensus 241 v~l~vDan~~~~~~~~~~~y~~~~~~~---~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~ 299 (432)
T 2ptz_A 241 FAICMDCAASETYDEKKQQYNLTFKSP---EPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQ 299 (432)
T ss_dssp CEEEEECCGGGGEETTTTEEETTTTSS---SCCEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred cEEEEECcccccccccCceeEeecccc---ccCCCCHHHHHHHHHHHHHhCCceEEECCCCc
Confidence 999999999999986 8999832211 14568999999999999999999999999975
|
| >2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-64 Score=492.31 Aligned_cols=289 Identities=55% Similarity=0.858 Sum_probs=269.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+|+||||+|||+|+|+|++|.. ++++|+|+|||.+||+|+||+++.+|.|+|+..++++|++.|+|.|+
T Consensus 1 ~~I~~v~~~~v~~srg~~~v~V~v~td~G~~Gge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~~~i~~~l~p~Li- 79 (431)
T 2fym_A 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALI- 79 (431)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT-
T ss_pred CeeEEEEEEEEEcCCCCeeEEEEEEECCCCccceecCcccccCcccceeccCCcccccccccHHHHHHHHHHHHHHHHc-
Confidence 7999999999999999999999999999987 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC-CccccccceEEeecCCcC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN-SNIILPVPAFNVINGGSH 158 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~-~~~~lP~P~~nvinGG~h 158 (299)
|+|+.+|++||+.|.+++||+|++++|+||+.|||||++.+.|+..|+|||+||+..... ..+.+|+|++|++|||.|
T Consensus 80 -G~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~~~~~~~~~~pv~~~~~~~gg~~ 158 (431)
T 2fym_A 80 -GKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEH 158 (431)
T ss_dssp -TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTCCCCCEECEEEEECGGG
T ss_pred -CCCHHHHHHHHHHHHHhhCCCcccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhcCcccccccccccceeEeeccCccc
Confidence 799999999999999999999999999999999999999999999999999999932111 123499999999999999
Q ss_pred CCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc-
Q psy12655 159 AGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT- 237 (299)
Q Consensus 159 a~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~- 237 (299)
+++.+++||||++|.++.++++++++..+.|++||.+++++ |. .+.+|++|||+|++++..+.|+.|++|++++||+
T Consensus 159 ~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~-g~-~~kvG~~gg~~~~~~~d~~~l~~vreai~~~g~~~ 236 (431)
T 2fym_A 159 ADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYEL 236 (431)
T ss_dssp SSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCB
T ss_pred cccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhc-Cc-ccccCcccCCCCCccchHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999966 74 5899999999999999999999999999999999
Q ss_pred -cceEEEeeccccccccCCceeeecCCCCCCCC-CccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 -GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKS-QWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 -~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~-~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+++.|++|+||||||++|+|++.+ .+ ..+|.+|+++++.+|.++|||.+|||||.+
T Consensus 237 G~dv~l~vDaaas~~~~~~~Y~~~~------~n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~ 294 (431)
T 2fym_A 237 GKDITLAMDCAASEFYKDGKYVLAG------EGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDE 294 (431)
T ss_dssp TTTBEEEEECCGGGGEETTEEEEGG------GTTEEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred CCccEEEEeechhhccccCceeecc------CCCCCCCHHHHHHHHHHHHHhCCceEEECCCCc
Confidence 579999999999999999999942 22 568999999999999999999999999974
|
| >1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-62 Score=482.75 Aligned_cols=289 Identities=50% Similarity=0.808 Sum_probs=265.6
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|++||||||||+|||+|+|+|++|.. +.++|+|+|||.+||+|+||+++.+|.|+||..++++|++.|+|.|+
T Consensus 13 ~i~~~~~r~i~dsrg~~~v~V~V~td~G~~Gge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~~i~~~l~p~Li-- 90 (444)
T 1w6t_A 13 IITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAII-- 90 (444)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--
T ss_pred hcceeEEEEEEcCCCCceEEEEEEECCCCEeeEecccccccccceeeeeccCcccccccccHHHHHHHHHHHHHHHHc--
Confidence 499999999999999999999999999987 89999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|+.+|.+||+.|.+++||+|++.+|+||+.|||||++.+.|+..|+|||++|+ |.....+|+|++|++|||.|++
T Consensus 91 G~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~vp~~~~~~~~gg~~a~ 167 (444)
T 1w6t_A 91 GYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLG---GFNTKVLPTPMMNIINGGSHSD 167 (444)
T ss_dssp TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---CTTCCEECEECEEEEECGGGCS
T ss_pred CCCHHHHHHHHHHHHHhhCCCccccchhHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCcccccccccceeccccccc
Confidence 7999999999999999999999999999999999999999999999999999999 7655689999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHccccc--
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG-- 238 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~-- 238 (299)
+++++|||||+|.++.++++++++..+.|+++|.+|+.+ |. .+.+|++|||+|++++..+.++.|++|++++||++
T Consensus 168 ~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~k-g~-~~kvG~~gg~~~~~~~d~~~l~avreav~~agy~pG~ 245 (444)
T 1w6t_A 168 APIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGK 245 (444)
T ss_dssp SSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTT
T ss_pred cccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhc-CC-ccccCCCCCCCCchHhHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999999999999999999999866 75 58999999999999999999999999999999984
Q ss_pred ceEEEeecccccccc--CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 239 KVEIGMDVAASEFFK--EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 239 ~i~ialD~AAse~~~--~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++.|.+|+||||||+ +++|+++ ++. ......+|.+|+++++.+|.++|||.+|||||.+
T Consensus 246 dv~L~vDaaas~~~~~~n~~y~~~-~n~-~~~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~ 306 (444)
T 1w6t_A 246 DVFLGFDCASSEFYDKERKVYDYT-KFE-GEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDE 306 (444)
T ss_dssp TBEEEEECCGGGGBC--CCCEETH-HHH-CTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred CcEEEEEccchhcccccCCceeec-ccc-CcccCCCCHHHHHHHHHHHHHhCCcEEEECCCCh
Confidence 799999999999998 7899872 100 0001447999999999999999999999999974
|
| >2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=438.79 Aligned_cols=285 Identities=55% Similarity=0.874 Sum_probs=269.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+|.||||+|+|.|+|+|++|.. +|++|+|+|||.+||+|+||+++ +|.|+|+..++..|++.|+|.|+
T Consensus 9 MkI~~i~~~~v~~s~g~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~-~~~g~~~~~~~~~i~~~l~p~Li- 86 (427)
T 2pa6_A 9 FEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEK-RFGGKGVLMAVENVNSIIRPEIL- 86 (427)
T ss_dssp GBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSS-GGGGTCCHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEEEcCCCCceEEEEEEECCCCeeeEecccccccCcceeEeecCCcc-ccccccHHHHHHHHHHHHHHHHc-
Confidence 6899999999999999999999999999987 99999999999999999999998 99999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|.+||+.|.++++|.+++.+++||+.||++|++.+.|+..|+|||++|+ |.....+|+|++|++|||.|+
T Consensus 87 -G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLG---g~~~~~vp~~~~~~~~gg~~~ 162 (427)
T 2pa6_A 87 -GYDARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLG---GFNSYVMPVPMMNVINGGKHA 162 (427)
T ss_dssp -TCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---CSCCCEECEECEEEEECSTTT
T ss_pred -CCCHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHHHHHHhCCcHHHHhc---Cccccccccchhccccccccc
Confidence 7999999999999999999999999999999999999999999999999999999 765557999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~ 239 (299)
++++++||||++|.++.+++++.++..+.|+++|..++.|+|...+++||+|||+|++++..+.++.|++|++++|++++
T Consensus 163 ~~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G~~~~ 242 (427)
T 2pa6_A 163 GNDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDE 242 (427)
T ss_dssp SSSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTCTTT
T ss_pred cCCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999998777875688999999999999999999999999999998667
Q ss_pred eEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+.|.+|++||+||+++.|++. ++.+|.+|++++|.+++++|||.+|||||.+
T Consensus 243 ~~L~vDa~as~~~~n~~~~~~--------n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~ 294 (427)
T 2pa6_A 243 VVFALDAAASEFYKDGYYYVE--------GKKLTREELLDYYKALVDEYPIVSIEDPFHE 294 (427)
T ss_dssp CEEEEECCGGGGEETTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred cEEEEEcchhccccCCceeec--------CCCCCHHHHHHHHHHHHhhCCCcEEEcCCCh
Confidence 999999999999999999982 3568999999999999999999999999974
|
| >2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=222.10 Aligned_cols=236 Identities=15% Similarity=0.144 Sum_probs=173.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+++.+. ++ +|+|.|+|.|++| . .|-+|+| .++..++..|++ ++|.|+
T Consensus 6 MkI~~i~~~~~~-~~-~~~v~V~v~td~G-~G~Ge~~~g---------------------~~~~~~~~~i~~-l~p~li- 59 (410)
T 2qq6_A 6 PRITRVETAAIR-AV-GPSVLVRVWAGDE-HGLGECYPS---------------------APAAGIHHIVMN-MEEQLL- 59 (410)
T ss_dssp CCCCEEEEEEEC-CC--CEEEEEEEETTE-EEEEEECCC---------------------SCHHHHHHHHHT-THHHHT-
T ss_pred ceEeEEEEEEEC-CC-CCEEEEEEEECCc-EEEEEecCC---------------------CChHHHHHHHHH-HHHHhC-
Confidence 789999999997 77 6799999999988 6 6665532 146778888988 999998
Q ss_pred CCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeec-C-C
Q psy12655 80 ESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVIN-G-G 156 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvin-G-G 156 (299)
|.|+.++..|++.|.+.+ +|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |.. .-++|+.+.++ | +
T Consensus 60 -G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~--~~~vp~y~~~~~g~~ 133 (410)
T 2qq6_A 60 -GEDPRDVERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLG---GAF--RRRVRLYADCNAGTV 133 (410)
T ss_dssp -TCCTTCHHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTT---CCS--CSEEEEEEECCCSEE
T ss_pred -CCCccHHHHHHHHHHHhhhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCc--cCceeEEEecccccc
Confidence 799999999999998876 7778888889999999999999999999999999998 643 46789999998 7 8
Q ss_pred cCCCCcc-cceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcc
Q psy12655 157 SHAGNKL-AMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAG 235 (299)
Q Consensus 157 ~ha~~~l-~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag 235 (299)
.|++|++ ++||||+.|. ...+++.++..+-|+.+|-.+..++|...+ .++|||.| ..+.+..++.+...-+.+|
T Consensus 134 ~h~~~~~~~~~~~~~~~~--~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~--~~~G~~~~-~~~~~~~~e~v~avRea~G 208 (410)
T 2qq6_A 134 DAAAHHIEGGLFEEGSNE--EYIAVAREAVERGFDAIKLDVDDITGPLHR--DFWNGAIS-PREHEAMVARVAAVREAVG 208 (410)
T ss_dssp CTTCCEEECCTTCSTHHH--HHHHHHHHHHHTTCSEEEEECCCSSSTTCS--CSSSCCCC-HHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccccCCHH--HHHHHHHHHHHcCCCEEEeeccccCCcccC--CcCccccc-hhhHHHHHHHHHHHHHhcC
Confidence 9999987 6999987662 223344444333344343211111132112 27888876 2234455555544444455
Q ss_pred cccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 236 YTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 236 ~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.|.+|+. +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 209 --~d~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iEeP~~ 246 (410)
T 2qq6_A 209 --PEVEVAIDMH-------GR---------------FDIPSSIRFARA-MEPFGLLWLEEPTP 246 (410)
T ss_dssp --SSSEEEEECT-------TC---------------CCHHHHHHHHHH-HGGGCCSEEECCSC
T ss_pred --CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HhhcCCCeEECCCC
Confidence 4688999972 22 356888888755 78899999999986
|
| >2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=201.64 Aligned_cols=232 Identities=19% Similarity=0.235 Sum_probs=169.1
Q ss_pred CceeeEEEeEEeCCCCCe--eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHH
Q psy12655 1 MPISKIHARQIFDSRGNP--TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPA 76 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~p--Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~ 76 (299)
|+|++|+++.+.+|+++| +|.|+|.|++|.. .|-+ |+ +|. +.......|++ |+|.
T Consensus 3 MkI~~i~~~~~~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~---~g~-----------------~~~~~~~~i~~-l~p~ 61 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQRPILVKVSTDEGIYGLGEAGIA---YGV-----------------GGSAAAGILKD-YAAL 61 (403)
T ss_dssp CCEEEEEEEEECCCTTTCCCCEEEEEEETTSCEEEEEESCS---SSS-----------------CHHHHHHHHHH-HHHH
T ss_pred CeEEEEEEEEecCCCCCCccceEEEEEeCCCCEEEEeecCC---CCC-----------------chHHHHHHHHH-HHHH
Confidence 789999999999998888 8899999999987 7776 54 221 22344566777 9999
Q ss_pred HhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEe-ec
Q psy12655 77 LLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNV-IN 154 (299)
Q Consensus 77 Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nv-in 154 (299)
|+ |.|+.++..|++.|.+.+ +|++++.++.||+.|+++|++.+.|+..|+|||++|+ |.. .-|+|+.+. ++
T Consensus 62 l~--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~--~~~vp~y~~~i~ 134 (403)
T 2ox4_A 62 LI--GEDPFNTEAIWEKLFKKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLG---GKN--REDLRVYASQLQ 134 (403)
T ss_dssp HT--TCCTTCHHHHHHHHHHSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCS--SSSEEEEEECGG
T ss_pred cC--CCCHHHHHHHHHHHHHhcccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcC---CCC--CCceeeeEeecc
Confidence 98 799999999999998765 5667778889999999999999999999999999998 643 346889998 88
Q ss_pred -C-CcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhh----cCCCCcccCCCCCcCCCCCChHHHHHHHH
Q psy12655 155 -G-GSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTK----FGLDATAVGDEGGFAPNILDNKEGLRLIV 228 (299)
Q Consensus 155 -G-G~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k----~G~~~t~vgdeGgfap~~~~~e~aL~ll~ 228 (299)
| +.|+++.+++|+| ++++.++..+-|+.+| ++-. .|.. -..+.||+.+ ..+.+..++.+.
T Consensus 135 ~g~~~~~~~~~~~e~~---------~~~a~~~~~~Gf~~vK--ik~~~~~~~G~~--~~s~~~g~~~-~~~~~~~~e~v~ 200 (403)
T 2ox4_A 135 FGWGKERKSKGRKEEY---------AEEALKAVAEGYDAVK--VDVLAHDRNGSR--EGVFLEGPLP-SETIKIGVERVE 200 (403)
T ss_dssp GCSSSSCCCCCSHHHH---------HHHHHHHHHTTCSEEE--ECCSSSCTTSCC--TTCCCSSSCC-HHHHHHHHHHHH
T ss_pred CCccccccccCCHHHH---------HHHHHHHHHcCCCEEE--EeccccCCcccc--ccCcccCCCc-hHHHHHHHHHHH
Confidence 7 8999998888876 4455554444454444 2100 0210 1123466543 123344555555
Q ss_pred HHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 229 EAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 229 eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
..-+.+| .++.|.+|+. +. +|.+|.+++++. +++|+|.+||||+.+
T Consensus 201 avr~avG--~d~~l~vDan-------~~---------------~~~~~ai~~~~~-l~~~~i~~iE~P~~~ 246 (403)
T 2ox4_A 201 AIRNAVG--PDVDIIVENH-------GH---------------TDLVSAIQFAKA-IEEFNIFFYEEINTP 246 (403)
T ss_dssp HHHHHHC--TTSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCEEEEECCSCT
T ss_pred HHHHHhC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHhhCCCEEeCCCCh
Confidence 4444455 4688999971 22 456899998775 788999999999863
|
| >2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=189.79 Aligned_cols=230 Identities=19% Similarity=0.273 Sum_probs=164.3
Q ss_pred CceeeEEEeEEeC--CCCCe----eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 1 MPISKIHARQIFD--SRGNP----TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 1 ~~I~~v~ar~ilD--srG~p----Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
|+|++|+.+.+.+ ++|+| ||.|+|.|++|.. .|-+ |+ +|. +.......|++
T Consensus 3 MkI~~i~~~~~~~pl~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~---~g~-----------------~~~~~~~~i~~- 61 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLSGIGEVGLA---YGA-----------------GAKAGVGIIRD- 61 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGGTTCCCEEEEEEETTSCEEEEEESCS---SST-----------------THHHHHHHHHH-
T ss_pred ceEEEEEEEEecccccccCcccccceEEEEEeCCCCEEEEeecCc---CCC-----------------ChHHHHHHHHH-
Confidence 7899999999976 66667 8899999999987 7776 54 121 23344556777
Q ss_pred HHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEE
Q psy12655 73 IAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFN 151 (299)
Q Consensus 73 i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~n 151 (299)
|+|.|+ |.|+.++..|++.|.+.+ +|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |.. +-++|+.+
T Consensus 62 l~p~li--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~--~~~vp~y~ 134 (410)
T 2gl5_A 62 LAPLIV--GEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLG---GKT--NEKLRTYA 134 (410)
T ss_dssp HGGGTT--TSCTTCHHHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---SCS--CSSEEEEE
T ss_pred HHHHhC--CCChHHHHHHHHHHHHhcccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCc--cCceeEeE
Confidence 999998 799999999999998765 5556677778999999999999999999999999998 643 23688898
Q ss_pred e-ec-C-CcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccC----------CCCCcCCCCC
Q psy12655 152 V-IN-G-GSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVG----------DEGGFAPNIL 218 (299)
Q Consensus 152 v-in-G-G~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vg----------deGgfap~~~ 218 (299)
. ++ | +.|+++.+++|+| .+++.++..+-|+.+| |+- .+ .+..| ++||+.+. .
T Consensus 135 ~~i~~g~~~~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK--ik~-~~--~~~~G~~~~~~~~~~~~GG~~~~-~ 199 (410)
T 2gl5_A 135 SQLQFGWGDKNHILVTPEEY---------AEAARAALDDGYDAIK--VDP-LE--IDRNGDDCVFQNRNRNYSGLLLA-D 199 (410)
T ss_dssp ECGGGCCTTCCSCCCSHHHH---------HHHHHHHHHTTCSEEE--ECS-SS--BCTTSCBTTTSSCCGGGGSCCCH-H
T ss_pred ecccCCccccccccCCHHHH---------HHHHHHHHHcCCCEEE--Eec-cc--cCCcccccccccccccccCccch-h
Confidence 8 88 7 8999888877776 3344443333344333 110 00 01123 37777651 2
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+..++.+...-+.+| .++.|.+|+. +. +|.+|.+++++. +++|+|.+||||+.
T Consensus 200 ~~~~~~e~v~avR~a~G--~d~~l~vDan-------~~---------------~~~~~ai~~~~~-l~~~~i~~iE~P~~ 254 (410)
T 2gl5_A 200 QLKMGEARIAAMREAMG--DDADIIVEIH-------SL---------------LGTNSAIQFAKA-IEKYRIFLYEEPIH 254 (410)
T ss_dssp HHHHHHHHHHHHHHHHC--SSSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCEEEEECSSC
T ss_pred HHHHHHHHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCeEECCCC
Confidence 33444555444434455 4688889972 22 456899998866 68899999999986
|
| >2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-21 Score=185.35 Aligned_cols=229 Identities=19% Similarity=0.276 Sum_probs=161.1
Q ss_pred CceeeEEEeEEeCCCCCe-----eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhH
Q psy12655 1 MPISKIHARQIFDSRGNP-----TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDI 73 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~p-----Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i 73 (299)
|+|++|+.+.+.+++++| +|.|+|.|++|.. .|.+ |+ +|. +....+..|++ +
T Consensus 4 MkI~~i~~~~~~~p~~~p~~~~~~v~V~v~td~G~~G~Ge~a~~---~g~-----------------~~~~~~~~i~~-l 62 (407)
T 2o56_A 4 MKITSVDIIDVANDFASATSKWRPVVVKINTDEGISGFGEVGLA---YGV-----------------GASAGIGMAKD-L 62 (407)
T ss_dssp CCEEEEEEEECCCCC-----CCCCEEEEEEETTSCEEEEEESCS---SSS-----------------CHHHHHHHHHH-H
T ss_pred CEEEEEEEEEeccccCCCcccceeEEEEEEeCCCCEEEEeeccC---CCC-----------------chHHHHHHHHH-H
Confidence 789999999999999999 8899999999986 7766 54 221 22344566777 9
Q ss_pred HHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEe
Q psy12655 74 APALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNV 152 (299)
Q Consensus 74 ~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nv 152 (299)
+|.|+ |.|+.++..|++.|.+.+ +|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |.. .-++|+.+.
T Consensus 63 ~p~li--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~--~~~vp~y~~ 135 (407)
T 2o56_A 63 SAIII--GMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLG---GKS--REKIRTYAS 135 (407)
T ss_dssp HHHHT--TSCTTCHHHHHHHHHHSSSGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCS--CSSEEEEEE
T ss_pred HHHhC--CCChHHHHHHHHHHHHhccccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCC--CCeeeeeee
Confidence 99998 799999999999998765 5556667778999999999999999999999999998 642 467888988
Q ss_pred -ec-C-CcCC--CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc------CCCCcccCCCCCcCCCCCChH
Q psy12655 153 -IN-G-GSHA--GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKF------GLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 153 -in-G-G~ha--~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~------G~~~t~vgdeGgfap~~~~~e 221 (299)
++ | +.|+ ++.++.|+| .+++.++..+-|+.+| + |. |. ...+++||+.+ ..+.+
T Consensus 136 ~i~~g~~~~~~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK--i--k~~~~~~~G~--~~~s~~~~~~~-~~~~~ 199 (407)
T 2o56_A 136 QLQFGWGDGSDKDMLTEPEQY---------AQAALTAVSEGYDAIK--V--DTVAMDRHGN--WNQQNLNGPLT-DKILR 199 (407)
T ss_dssp CGGGCCSTTCTTCCCCSHHHH---------HHHHHHHHHTTCSEEE--E--CCSSBCTTSC--BSCSCCCSSCC-HHHHH
T ss_pred eccCCccccccccccCCHHHH---------HHHHHHHHHcCCCEEE--E--cccccCCcCc--cccCcccCCCc-hhHHH
Confidence 87 6 7888 566666665 3334333333333333 1 11 21 01234666553 22344
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
..++.+...-+.+| .++.|.+|+. +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 200 ~~~e~v~avR~a~G--~d~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 251 (407)
T 2o56_A 200 LGYDRMAAIRDAVG--PDVDIIAEMH-------AF---------------TDTTSAIQFGRM-IEELGIFYYEEPVM 251 (407)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCCSCEECSSC
T ss_pred HHHHHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCEEeCCCC
Confidence 55555554444456 4688999961 22 456898888765 68899999999986
|
| >2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=178.77 Aligned_cols=226 Identities=21% Similarity=0.232 Sum_probs=154.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH-HHh
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP-ALL 78 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p-~Li 78 (299)
|+|++|+.|.+. ++++++|.|+|.|++|.. .|-+++ . | |+++..++..|++ ++| .|+
T Consensus 3 mkI~~i~~~~v~-~~~~~~v~V~v~td~G~~G~GE~~~---~---------------~-g~~~~~~~~~i~~-l~~~~l~ 61 (392)
T 2poz_A 3 LKITGVNIYLLK-SGRLHPVLVEISTDEGITGAGEAGI---A---------------Y-GVGGTAAAGMIKD-LSERFLI 61 (392)
T ss_dssp CCEEEEEEEECC-BTTBCCEEEEEEETTSCCEEEEESC---S---------------S-SSCHHHHHHHHHH-HHHHHTT
T ss_pred CeEEEEEEEEEe-cCCccEEEEEEEECCCCEEEEeecC---C---------------c-CCchHHHHHHHHH-hhHhhhc
Confidence 789999999999 999999999999999865 555443 0 3 6677788888885 899 998
Q ss_pred cCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCc
Q psy12655 79 KESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGS 157 (299)
Q Consensus 79 ~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ 157 (299)
|+|+.++..|++.|.+. ++|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |... -|+|+.+. |
T Consensus 62 --G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~--~~v~~y~~---g- 130 (392)
T 2poz_A 62 --GKDPSRIEELWSTMYDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFG---GKIR--DRVRAYAN---G- 130 (392)
T ss_dssp --TCCTTCHHHHHHHHHHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSC--SEEEEEEC---S-
T ss_pred --CCChhHHHHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCcc--CceEEEEe---c-
Confidence 79999999999999775 78888888889999999999999999999999999998 6432 27888876 3
Q ss_pred CCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC-CCCcCCCC---CChHHHHHHHHHHHHH
Q psy12655 158 HAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGD-EGGFAPNI---LDNKEGLRLIVEAIEK 233 (299)
Q Consensus 158 ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgd-eGgfap~~---~~~e~aL~ll~eAi~~ 233 (299)
|..+..+.|+| .+++.++..+-|+.+| -|.|.... |. -++|.+.- .+.+..++.+...-+.
T Consensus 131 ~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK----ik~g~~~~--g~~~~~~~~gg~~~~~~~~~~e~v~avr~a 195 (392)
T 2poz_A 131 WYGAADTPDEF---------ARAVERPLKEGYGALK----FYPLAQRV--GSALQHVTRRSMSAEAIELAYRRVKAVRDA 195 (392)
T ss_dssp CCTTCCSHHHH---------HHHTHHHHHTTCSEEE----ECCCCEEE--TTEEECCBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHH---------HHHHHHHHHcCCCEEE----Eecccccc--cccccccccCCcchhhHHHHHHHHHHHHHh
Confidence 54333344443 2222222222222222 01110000 00 01332211 2334455555544444
Q ss_pred cccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 234 AGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 234 ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+| .++.|.+|+. +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 196 ~G--~d~~l~vD~n-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 235 (392)
T 2poz_A 196 AG--PEIELMVDLS-------GG---------------LTTDETIRFCRK-IGELDICFVEEPCD 235 (392)
T ss_dssp HC--TTSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCEEEEECCSC
T ss_pred cC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 55 4688999972 22 456898998776 68899999999986
|
| >1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=162.53 Aligned_cols=210 Identities=20% Similarity=0.224 Sum_probs=141.2
Q ss_pred CeeEEEEEEECCCce-EEEee----cCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVP----SGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEID 91 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~p----sGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID 91 (299)
.|+|.|+|.|++|.. .|.++ ||+|+ || ..|.|.++..++ ++.++|.|+ |.++.++..|+
T Consensus 50 ~~~v~V~v~td~G~~G~GE~~~~~~sGa~~--------r~---~~~~~~~~~~~i---~~~l~p~Li--G~d~~~~~~i~ 113 (413)
T 1kko_A 50 GECVSVQLILENGAVAVGDCAAVQYSGAGG--------RD---PLFLAEHFIPFL---NDHIKPLLE--GRDVDAFLPNA 113 (413)
T ss_dssp EEEEEEEEEETTSCEEEEEECCCTTTTSTT--------CC---CCCCHHHHHHHH---HHHTHHHHT--TCBCSCSHHHH
T ss_pred cceEEEEEEECCCCEEEEEecccccccccc--------cC---ccccHHHHHHHH---HHHHHHHHc--CCChHhHHHHH
Confidence 478999999999987 77776 88885 22 257776666654 667999998 78999999999
Q ss_pred HHHHhhcCCCCccc-CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc---ccccceEEeecCCcCCCCccc---
Q psy12655 92 EFMIKLDGTENKSK-FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI---ILPVPAFNVINGGSHAGNKLA--- 164 (299)
Q Consensus 92 ~~L~~lDgT~nks~-lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~---~lP~P~~nvinGG~ha~~~l~--- 164 (299)
+.|.... ++++ .+.|++.|+++|++.+.|+..++|||++|+ |.... +-|+|+.+. ||.|+.+.++
T Consensus 114 ~~l~~~~---~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~l~~~~vp~y~~--~g~~~~~~~~~~~ 185 (413)
T 1kko_A 114 RFFDKLR---IDGNLLHTAVRYGLSQALLDATALASGRLKTEVVC---DEWQLPCVPEAIPLFGQ--SGDDRYIAVDKMI 185 (413)
T ss_dssp HHHHHCE---ETTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---HHTTCCCCCCCCCEECC--CTTCTTHHHHHHH
T ss_pred HHHHhhh---cccCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CccccccccCCeEEEEe--cCccccCCHHHHH
Confidence 9885542 3333 568999999999999999999999999998 42211 338999885 7777654332
Q ss_pred ceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHH---HHHH-HHcccccce
Q psy12655 165 MQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLI---VEAI-EKAGYTGKV 240 (299)
Q Consensus 165 iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll---~eAi-~~ag~~~~i 240 (299)
.|...+++.| +|+ .+| ..+|. +.+...++++.. .+|| +.+|+ ++
T Consensus 186 ~~~~~~~~~G-------------~~~----~iK-------~KvG~------~~~~~~~~l~~d~~~v~aiR~~~G~--~~ 233 (413)
T 1kko_A 186 LKGVDVLPHA-------------LIN----NVE-------EKLGF------KGEKLREYVRWLSDRILSLRSSPRY--HP 233 (413)
T ss_dssp HTTCSEEEET-------------TCC----CCC-------CCCCT------TSHHHHHHHHHHHHHHHHHCSSTTC--CC
T ss_pred HHHHHHHhCC-------------Ccc----EEE-------EecCC------ChhhHHHHHHHHHHHHHHHHHhhCC--CC
Confidence 2333444444 011 111 11232 111122333333 3455 33443 69
Q ss_pred EEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc-CCe-eEeecCCC
Q psy12655 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE-YPI-VSIEDPML 298 (299)
Q Consensus 241 ~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~-yPI-vsiEDp~~ 298 (299)
.|.+|+.. +|.+. ..+|.+|.++++..|.+. ||+ ++||||+.
T Consensus 234 ~L~vDan~-------~~~~~---------~~~~~~~A~~~~~~L~~~~~~~~l~iEqP~~ 277 (413)
T 1kko_A 234 TLHIDVYG-------TIGLI---------FDMDPVRCAEYIASLEKEAQGLPLYIEGPVD 277 (413)
T ss_dssp EEEEECTT-------HHHHH---------TTTCHHHHHHHHHHTGGGGTTSCEEEECCCC
T ss_pred eEEEECCC-------ccccc---------cCCCHHHHHHHHHHHHhccCCcceEEECCcC
Confidence 99999864 45442 125889999999999886 442 29999996
|
| >2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-17 Score=158.37 Aligned_cols=188 Identities=19% Similarity=0.165 Sum_probs=134.0
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
.+|.|+|.|++|.. .|.+++| ..++..+++.|+|.|+ |+++.++..|++.|.+
T Consensus 70 ~~v~V~v~td~G~~G~GE~~~g------------------------~~~~~~v~~~l~p~Li--G~d~~~~~~i~~~m~~ 123 (415)
T 2p3z_A 70 GTLIVEVEAENRQTGFAVSTAG------------------------EMGCFIVEKHLNRFIE--GKCVSDIKLIHDQMLG 123 (415)
T ss_dssp CEEEEEEEETTSCEEEEEEECH------------------------HHHHHHHHHTTHHHHT--TSBTTCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCEEEEEecCC------------------------HHHHHHHHHHHHHHHC--CCChhhHHHHHHHHHH
Confidence 48999999999986 7776542 1345677888999998 7899999999999987
Q ss_pred hc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCC
Q psy12655 97 LD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA 175 (299)
Q Consensus 97 lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga 175 (299)
.+ ++.+++.++.||+.|+++|++.+.|+..|+|||++|+ |..... +|+.++ |+ +
T Consensus 124 ~~~~~~g~~~~~~~A~said~ALwDl~ak~~g~Pl~~lLG---G~~~~~--vp~y~~--g~-------~----------- 178 (415)
T 2p3z_A 124 ATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLG---GAVRDE--IQFYAT--GA-------R----------- 178 (415)
T ss_dssp HHTTTSTTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSSSE--EEEEEE--SS-------C-----------
T ss_pred hhhcccCCCcchHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCc--eeeeec--CC-------C-----------
Confidence 65 5556677788999999999999999999999999998 643333 455654 32 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCC
Q psy12655 176 SSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEG 255 (299)
Q Consensus 176 ~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g 255 (299)
.+++++++ |+.+| -| .++|++|||. +.++.++.|...-+..| .++.|.+|+. +
T Consensus 179 --~~~~~~~G---~~~~K----iK-----~g~g~~~G~~----~~~~d~~~v~avrea~G--~~~~L~vDaN-------~ 231 (415)
T 2p3z_A 179 --PDLAKEMG---FIGGK----MP-----THWGPHDGDA----GIRKDAAMVADMREKCG--PDFWLMLDCW-------M 231 (415)
T ss_dssp --HHHHHHHT---CSEEE----EE-----CCCCGGGHHH----HHHHHHHHHHHHHHHHC--SSSEEEEECT-------T
T ss_pred --HHHHHHhC---cceEE----Ee-----cccCcccccc----cHHHHHHHHHHHHHHhC--CCCEEEEECC-------C
Confidence 12233322 22222 11 1457788875 33444555544444445 4799999972 2
Q ss_pred ceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 256 QYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 256 ~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
. +|.+|.++++.. +++|+|.+|||||.+
T Consensus 232 ~---------------~~~~~Ai~~~~~-l~~~~i~~iEqPl~~ 259 (415)
T 2p3z_A 232 S---------------QDVNYATKLAHA-CAPFNLKWIEECLPP 259 (415)
T ss_dssp C---------------CCHHHHHHHHHH-HGGGTCCEEECCSCT
T ss_pred C---------------CCHHHHHHHHHH-HhhcCCceEeCCCCc
Confidence 2 456899999877 788999999999973
|
| >2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-16 Score=152.54 Aligned_cols=210 Identities=18% Similarity=0.242 Sum_probs=141.6
Q ss_pred CceeeEEEeEEe--------CCC----------CCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCcc
Q psy12655 1 MPISKIHARQIF--------DSR----------GNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61 (299)
Q Consensus 1 ~~I~~v~ar~il--------Dsr----------G~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkg 61 (299)
|+|++|..+.+- .|+ ..++|.|+|.|++|.. .|.+|++. +.+
T Consensus 26 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-----------------~~~-- 86 (398)
T 2pp0_A 26 DRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKR-----------------AGG-- 86 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEEESS-----------------TTH--
T ss_pred CeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCEEEEEecCcc-----------------chH--
Confidence 789999887772 222 2578999999999987 77777642 111
Q ss_pred HHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q psy12655 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS 141 (299)
Q Consensus 62 v~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~ 141 (299)
.++..+.+.++|.|+ |.++.++..|++.|...++....+.++.||+.|+++|++.+.|+..|+|||++|+ |.
T Consensus 87 --~~~~~~~~~l~p~l~--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~- 158 (398)
T 2pp0_A 87 --QGIYAHAKEIADNLL--GEDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLG---AH- 158 (398)
T ss_dssp --HHHHHHHHHHGGGGT--TSCTTCHHHHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHC---CS-
T ss_pred --HHHHHHHHHHHHHHc--CCCchhHHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-
Confidence 145554556999998 7899999999999988875333345677999999999999999999999999998 65
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCC
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILD 219 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~ 219 (299)
.-++|+.+.+ ||.|. .+.|+| .+++ ++..+ .|... ..+|+ .+
T Consensus 159 --~~~vp~y~~~-g~~~~---~~~e~~---------~~~a-----------~~~~~--~Gf~~vKik~g~--------~~ 202 (398)
T 2pp0_A 159 --RDSVQCYNTS-GGFLH---TPLDQV---------LKNV-----------VISRE--NGIGGIKLKVGQ--------PN 202 (398)
T ss_dssp --CSEEEEEECT-TSCTT---SCHHHH---------HHHH-----------HHHHH--TTCSCEEEECCC--------SC
T ss_pred --CCCeeEEEec-CCcCC---CCHHHH---------HHHH-----------HHHHH--hCCCeEEEecCC--------CC
Confidence 4678888876 44431 233332 1222 22222 13111 12232 23
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+..++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 203 ~~~d~e~v~avR~avG--~d~~l~vDan-------~~---------------~~~~~ai~~~~~-l~~~~i~~iEqP~~ 256 (398)
T 2pp0_A 203 CAEDIRRLTAVREALG--DEFPLMVDAN-------QQ---------------WDRETAIRMGRK-MEQFNLIWIEEPLD 256 (398)
T ss_dssp HHHHHHHHHHHHHHHC--SSSCEEEECT-------TC---------------SCHHHHHHHHHH-HGGGTCSCEECCSC
T ss_pred HHHHHHHHHHHHHHcC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHHcCCceeeCCCC
Confidence 4555555533333335 4678888861 22 456888888776 68899999999986
|
| >3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-16 Score=150.70 Aligned_cols=207 Identities=20% Similarity=0.262 Sum_probs=144.6
Q ss_pred CceeeEEEeEE--------eCCCCC------eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN------PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~------pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+ .+|+|+ ++|.|+|.|++|.. .|-+++ | .++..+
T Consensus 39 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~~G~GE~~~----g-----------------~~~~~~ 97 (428)
T 3bjs_A 39 MKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHP----G-----------------RSPGAI 97 (428)
T ss_dssp CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECC----T-----------------TCHHHH
T ss_pred CEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCCEEEEEecC----C-----------------CCHHHH
Confidence 78999999988 789998 89999999999875 554432 1 346677
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCC-Cccc--CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTE-NKSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~-nks~--lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
+..|++.++|.|+ |.|+.++..|++.|.+ +|. ++++ ++.||+.|+++|++.+.|+..|+|||++|+ |.
T Consensus 98 ~~~i~~~l~p~li--G~d~~~~~~i~~~l~~--~~~~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~-- 168 (428)
T 3bjs_A 98 TSLIHNTIAPMLI--GMKATDCVGAWQRVHR--MQLSSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLG---GS-- 168 (428)
T ss_dssp HHHHHHTTTTTTT--TSBTTCHHHHHHHHHH--HTTTTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CC--
T ss_pred HHHHHHHHHHHhC--CCCccCHHHHHHHHHH--hhhhccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC--
Confidence 8888888999998 7899999999999855 344 4433 356899999999999999999999999998 65
Q ss_pred cccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCCh
Q psy12655 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDN 220 (299)
Q Consensus 143 ~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~ 220 (299)
.-++|+.+. |..|.++. + +++ .+ +.++..+. |... ..+|+ +.
T Consensus 169 -~~~vp~~~s--g~~~~~~~-~-e~~---------~~-----------~a~~~~~~--Gf~~vKik~g~---------~~ 212 (428)
T 3bjs_A 169 -KRRIPAYAG--GIALGYQP-K-ESL---------AE-----------EAQEYIAR--GYKALKLRIGD---------AA 212 (428)
T ss_dssp -CCCEEEEEE--SSCSCSCC-H-HHH---------HH-----------HHHHHHHH--TCSEEEEECCS---------CH
T ss_pred -CCceeeeee--ccccCCCh-H-HHH---------HH-----------HHHHHHHC--CCCEEEECCCC---------CH
Confidence 457888876 55553221 0 111 11 22222221 2100 12232 45
Q ss_pred HHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 221 KEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 221 e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 213 ~~d~e~v~avR~avG--~d~~l~vDan-------~~---------------~~~~eai~~~~~-L~~~~i~~iEqP~~ 265 (428)
T 3bjs_A 213 RVDIERVRHVRKVLG--DEVDILTDAN-------TA---------------YTMADARRVLPV-LAEIQAGWLEEPFA 265 (428)
T ss_dssp HHHHHHHHHHHHHHC--TTSEEEEECT-------TC---------------CCHHHHHHHHHH-HHHTTCSCEECCSC
T ss_pred HHHHHHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 666666643333335 4688889861 22 456888888765 78899999999986
|
| >2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-15 Score=145.96 Aligned_cols=212 Identities=15% Similarity=0.167 Sum_probs=143.2
Q ss_pred CceeeEEEeEEeC-------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 1 MPISKIHARQIFD-------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 1 ~~I~~v~ar~ilD-------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
|+|++|+.|.+.. ++++|+|.|+|.|++|.. .|-+++.. +.+.++.. .|++
T Consensus 11 MkI~~i~~~~~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-----------------~~~~~~~~---~i~~- 69 (391)
T 2qgy_A 11 GKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGIEGWGEAFSIN-----------------FREKGIAI---IIKE- 69 (391)
T ss_dssp CCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCCEEEEEECCCT-----------------TTHHHHHH---HHHH-
T ss_pred CEEEEEEEEEecCccccccccCCCcEEEEEEEECCCCEEEecccCCC-----------------CChHHHHH---HHHH-
Confidence 7899999999976 568899999999999976 66555421 12234443 4566
Q ss_pred HHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEe
Q psy12655 73 IAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNV 152 (299)
Q Consensus 73 i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nv 152 (299)
++|.|+ |.|+.++..+++.|..++.......+ .+++.|+++|++.+.|+..++|||++|+ |.. +-|+|+.+
T Consensus 70 l~p~l~--G~d~~~~~~i~~~l~~~~~~~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~--~~~vp~~~- 140 (391)
T 2qgy_A 70 LFREIS--NIPNLSIKSFYNKISLLSDGHRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLT---KSP--KPNVPIYA- 140 (391)
T ss_dssp HHHHHT--TCTTCCHHHHHHHHHHHHTTCCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHC---SSC--CSEEEEEE-
T ss_pred HHHHhc--CCChhHHHHHHHHHHhhhhhccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCc--CCCcceEE-
Confidence 999998 79999999999999875532111223 7899999999999999999999999998 643 45778777
Q ss_pred ecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHH
Q psy12655 153 INGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIE 232 (299)
Q Consensus 153 inGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~ 232 (299)
||+.|+.. +.++.. .+.++..+ .|.....+ -.|+ ++.+..++.+...-+
T Consensus 141 -~g~~~~~~---------------~~~~~~-------~~a~~~~~--~Gf~~vKi--k~g~----~~~~~~~e~v~avR~ 189 (391)
T 2qgy_A 141 -TCWSDLKK---------------DTNDYL-------RQIEKFYG--KKYGGIKI--YPML----DSLSISIQFVEKVRE 189 (391)
T ss_dssp -ECCCSSCC---------------CHHHHH-------HHHHHHHH--TTCSCEEE--CCCC----SSHHHHHHHHHHHHH
T ss_pred -ecccCCCC---------------CHHHHH-------HHHHHHHH--cCCCEEEE--ccCC----ChHHHHHHHHHHHHH
Confidence 67665311 222211 12223222 13211111 0111 224677777765555
Q ss_pred HcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 233 KAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 233 ~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+| .++.|.+|+- + .+|.+|.+++... +++|+|.+||+|+.
T Consensus 190 a~G--~d~~l~vDan-------~---------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 230 (391)
T 2qgy_A 190 IVG--DELPLMLDLA-------V---------------PEDLDQTKSFLKE-VSSFNPYWIEEPVD 230 (391)
T ss_dssp HHC--SSSCEEEECC-------C---------------CSCHHHHHHHHHH-HGGGCCSEEECSSC
T ss_pred HhC--CCCEEEEEcC-------C---------------CCCHHHHHHHHHH-HHhcCCCeEeCCCC
Confidence 566 3678888871 1 2456888888766 67899999999985
|
| >3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-15 Score=145.14 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=137.8
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|+ |.. .|-++++ ..++.
T Consensus 6 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td-G~~G~Ge~~~~------------------------~~~~~ 60 (372)
T 3cyj_A 6 PRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGG-GRKGLGYTYGD------------------------VSVGR 60 (372)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEEEESC------------------------THHHH
T ss_pred CEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeC-CcEEEEeccCc------------------------HHHHH
Confidence 67888887655 23444 45789999999 876 6666530 24566
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.+++.++|.|+ |.++.++..+++.|.+. +++.+ +.++.||+.|+++|++.+.|+..|+|||++|+ |.. -+
T Consensus 61 ~i~~~l~~~l~--g~d~~~~~~i~~~l~~~~~~~~~-~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~---~~ 131 (372)
T 3cyj_A 61 FVESKLAGVAE--GSDALSPPAVWARMQAAIRNAGR-PGVGAMAVSAVDIALWDLKARLLGLPLADALP---RFH---AE 131 (372)
T ss_dssp HHHHHTHHHHT--TSBTTCHHHHHHHHHHHTTTTCS-SBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSC---CCC---SS
T ss_pred HHHHHHHHHHc--CCCcccHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHhhhHcCCcHHHHhC---CCC---CC
Confidence 78888999998 78999999999998764 77766 56678999999999999999999999999998 642 35
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~l 226 (299)
+|..+. +|.|. .+.|| .++++.++..+-|+.+| ..+|+ +++...+.++.
T Consensus 132 vp~~~~--~g~~~---~~~~~---------~~~~a~~~~~~G~~~~K-----------iKvG~------~~~~d~~~v~a 180 (372)
T 3cyj_A 132 VPVYGS--GGFTS---YPLRR---------LQEQLGGWAAAGIPRVK-----------MKVGR------EPEKDPERVRA 180 (372)
T ss_dssp EEEEEE--CCCTT---SCHHH---------HHHHHHHHHHTTCCEEE-----------EECCS------SGGGHHHHHHH
T ss_pred ceEEEE--cCCCC---CCHHH---------HHHHHHHHHHcCCCEEE-----------EcCCC------CHHHHHHHHHH
Confidence 666665 34332 12222 12222222211121111 12332 23333444444
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC-CeeEeecCCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY-PIVSIEDPMLR 299 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y-PIvsiEDp~~e 299 (299)
+++++ | +++.|.+|+ ++. +|.+|.++++.. +++| +|.+||||+.+
T Consensus 181 vr~a~---g--~~~~l~vDa-------N~~---------------~~~~~a~~~~~~-l~~~~~i~~iEqP~~~ 226 (372)
T 3cyj_A 181 AREAI---G--ESVELMVDA-------NGA---------------YTRKQALYWAGA-FAREAGISYLEEPVSS 226 (372)
T ss_dssp HHHHH---C--TTSEEEEEC-------TTC---------------SCHHHHHHHHHH-HHHHHCCCEEECSSCT
T ss_pred HHHHh---C--CCCeEEEEC-------CCC---------------CCHHHHHHHHHH-HHhhcCCcEEECCCCc
Confidence 44443 5 478999997 122 456888998876 6889 99999999963
|
| >2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-16 Score=149.06 Aligned_cols=196 Identities=15% Similarity=0.134 Sum_probs=136.2
Q ss_pred CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccch---------
Q psy12655 17 NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQ--------- 87 (299)
Q Consensus 17 ~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ--------- 87 (299)
+|+|.|+| |++|.. |--|+..++ .|.|+++..++..++ .+.|.|+ |.++.+|
T Consensus 30 ~~~v~V~v-td~G~~----------G~GE~~~~~-----~~~~e~~~~~~~~l~-~~~~~l~--g~d~~~~~~~~~~~~~ 90 (377)
T 2pge_A 30 KPTWFVRL-DIDGHG----------GQGEVSLIP-----GLSLDPEEQIGRELD-LLARRLR--AEEPIRLRQFLAERGG 90 (377)
T ss_dssp ECEEEEEE-EETTEE----------EEEEEECCT-----TTCSSCHHHHHHHHH-HHHHHHH--HSCCHHHHHHHHHTSS
T ss_pred cceEEEEE-EcCCCE----------EEEEeccCC-----CCCcCCHHHHHHHHH-HHHHHHh--CCCccchhhhhhcccc
Confidence 78999999 988864 223333332 477888999999999 5899999 5677554
Q ss_pred ---HHHHHHHHhhcCCCCc-----ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 88 ---KEIDEFMIKLDGTENK-----SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 88 ---~~ID~~L~~lDgT~nk-----s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
..+++.|.++|++.++ ...+.|++.|+++|++.+.|+..|+|||++|+ |. ...+|++. .+++|
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~llG---g~-~~~vp~~~--~i~~~--- 161 (377)
T 2pge_A 91 ADFSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFT---RG-EKRIPVNG--LIWMG--- 161 (377)
T ss_dssp CTTSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTT---TT-SCCEEBCE--EECCC---
T ss_pred ccHHHHHHhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CC-CCeEEEeE--EecCC---
Confidence 6788888777765432 34678999999999999999999999999998 65 34566665 35443
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~ 237 (299)
+.++.+ ..+++.+.+ |. +-..+|+ .++++.++.+..+.+.+|+
T Consensus 162 -----------------~~e~~~-------~~a~~~~~~--G~~~~K~Kvg~--------~~~~~d~~~v~avr~~~g~- 206 (377)
T 2pge_A 162 -----------------EAAFMQ-------EQIEAKLAE--GYGCLKLKIGA--------IDFDKECALLAGIRESFSP- 206 (377)
T ss_dssp -----------------CHHHHH-------HHHHHHHHT--TCSEEEEEC-----------CHHHHHHHHHHHHHHSCT-
T ss_pred -----------------CHHHHH-------HHHHHHHHH--hhhhheeecCC--------CChHHHHHHHHHHHHHcCC-
Confidence 122221 122222221 21 1112342 2579999999999998875
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+++.|.+|+ ++.| |.+|.++++ +.+++|+|.+||||+.
T Consensus 207 ~~~~l~vDa-------N~~~---------------~~~~a~~~~-~~l~~~~i~~iEqP~~ 244 (377)
T 2pge_A 207 QQLEIRVDA-------NGAF---------------SPANAPQRL-KRLSQFHLHSIEQPIR 244 (377)
T ss_dssp TTCEEEEEC-------TTBB---------------CTTTHHHHH-HHHHTTCCSEEECCBC
T ss_pred CCceEEEEC-------CCCC---------------CHHHHHHHH-HHHhcCCCcEEEccCC
Confidence 479999997 2334 336777876 7788999999999995
|
| >1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-15 Score=146.33 Aligned_cols=122 Identities=18% Similarity=0.185 Sum_probs=100.1
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-+++.. . ..|.|+++..+++
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-----------~---~~~~~e~~~~~~~ 85 (386)
T 1wue_A 20 MNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAFE-----------Q---PDYVQETLVTERF 85 (386)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCS-----------S---TTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCCEEEEEeecCC-----------C---CcccCCcHHHHHH
Confidence 78999988766 34555 478999999999875 66655421 1 2588999999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ | ....+|+
T Consensus 86 ~i~~~l~p~l~--G~d~~~~~~l~~~l~~~~g-------~~~A~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~ 152 (386)
T 1wue_A 86 IIQQHLIPLLL--TEAIEQPQEVSTIFEEVKG-------HWMGKAALETAIWDLYAKRQQKSLTEFFG---P-TRRKIPV 152 (386)
T ss_dssp HHHHTHHHHHT--TSCCCSTHHHHHHGGGSCS-------CHHHHHHHHHHHHHHHHHHTTSBGGGGSS---S-CCSEEEC
T ss_pred HHHHHHHHHHc--CCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCCeeEe
Confidence 99999999998 7899999999999977654 46899999999999999999999999998 6 3446777
Q ss_pred ce
Q psy12655 148 PA 149 (299)
Q Consensus 148 P~ 149 (299)
+.
T Consensus 153 ~~ 154 (386)
T 1wue_A 153 GI 154 (386)
T ss_dssp CE
T ss_pred eE
Confidence 65
|
| >1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=9.3e-15 Score=139.92 Aligned_cols=214 Identities=16% Similarity=0.153 Sum_probs=143.0
Q ss_pred CceeeEEEeEEe-----------CC-CC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQIF-----------DS-RG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~il-----------Ds-rG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|+.+.+= .| +| .+++-|+|.|++|.. .|-++ | + .
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~-~--------------~---------~ 56 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTA-P--------------E---------I 56 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEEC-G--------------G---------G
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCCEEEEEec-C--------------c---------h
Confidence 789999887651 33 44 467899999999875 65554 1 0 0
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCc-ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENK-SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nk-s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
.+...|++.++|.|+ |.|+.++..|++.|.+ +|.++ +.++.+++.|+++|++.+.|+..|+|||++|+ |.
T Consensus 57 ~~~~~i~~~l~~~l~--g~d~~~~~~~~~~l~~--~~~~~g~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~-- 127 (382)
T 1rvk_A 57 VRPHVIEKFVKKVLI--GEDHRDRERLWQDLAH--WQRGSAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIG---GY-- 127 (382)
T ss_dssp GCHHHHHHTHHHHHT--TSBTTCHHHHHHHHHH--HHTTTTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHC---CS--
T ss_pred HHHHHHHHHHHHHHc--CCChHHHHHHHHHHHH--hhhcccchHHHHHHHHHHHHHHHHhHhHhCCCHHHHhC---CC--
Confidence 145667778999998 7899999999999854 22222 34577999999999999999999999999998 64
Q ss_pred cccccceEEeec-CCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCC-CCCcCCCCC
Q psy12655 143 IILPVPAFNVIN-GGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGD-EGGFAPNIL 218 (299)
Q Consensus 143 ~~lP~P~~nvin-GG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgd-eGgfap~~~ 218 (299)
.-++|+.+.+. |+.|+++.. +.++..+ +.++..+. |. .-..+|. .+++. .
T Consensus 128 -~~~vp~~~~~~~g~~~~~~~~-------------~~e~~~~-------~a~~~~~~--Gf~~iKik~g~~~~~~~---~ 181 (382)
T 1rvk_A 128 -RDKVLAYGSIMCGDELEGGLA-------------TPEDYGR-------FAETLVKR--GYKGIKLHTWMPPVSWA---P 181 (382)
T ss_dssp -CSEEEEEEEECCCCCCTTTTS-------------SHHHHHH-------HHHHHHHH--TCSEEEEECCCTTSTTC---C
T ss_pred -CCcceecEEeccCccccccCC-------------CHHHHHH-------HHHHHHHC--CCCEEEEcCCcCccccc---c
Confidence 45677787666 888865322 2222211 12222221 21 0011222 13333 3
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+..++.+...-+.+| .++.|.+|+. +. +|.+|.+++.. .+++|+|.+||+|+.
T Consensus 182 ~~~~~~e~v~avr~a~g--~d~~l~vDan-------~~---------------~~~~~a~~~~~-~l~~~~i~~iE~P~~ 236 (382)
T 1rvk_A 182 DVKMDLKACAAVREAVG--PDIRLMIDAF-------HW---------------YSRTDALALGR-GLEKLGFDWIEEPMD 236 (382)
T ss_dssp CHHHHHHHHHHHHHHHC--TTSEEEEECC-------TT---------------CCHHHHHHHHH-HHHTTTCSEEECCSC
T ss_pred chHHHHHHHHHHHHHhC--CCCeEEEECC-------CC---------------CCHHHHHHHHH-HHHhcCCCEEeCCCC
Confidence 56667776655444456 4688889971 22 45688888865 678899999999986
|
| >2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.9e-15 Score=139.69 Aligned_cols=207 Identities=18% Similarity=0.209 Sum_probs=144.2
Q ss_pred CceeeEEEeEEe---------CCCC-----CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQIF---------DSRG-----NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~il---------DsrG-----~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+- .|+| .++|.|+|.|++|.. |-.|+..+ + ..|.|.++..+.
T Consensus 4 MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~--~--~~~~~~~~~~~~ 69 (371)
T 2ps2_A 4 LKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIE----------GWGESTPF--G--SNYIASHPRGVR 69 (371)
T ss_dssp CCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSCE----------EEEEECCS--T--TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCCE----------EEEEEecC--C--cccCCCCHHHHH
Confidence 679999988663 1344 367999999998854 33343333 1 258888999999
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|++ ++|.|+ |.++.++..+++.|.... +.+.+++.|+++|++.+.|+..|+|||++|+ |.. .-+
T Consensus 70 ~~i~~-l~~~l~--g~d~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~--~~~ 135 (371)
T 2ps2_A 70 AGIAT-MAPSLI--GLDPRRVDRINDAMDDAL------LGHEDAKTAIDVACWDIFGKSVGLPVCELLG---GRT--NTR 135 (371)
T ss_dssp HHHHH-HHHHHT--TSCTTCHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCC--SSC
T ss_pred HHHHH-HHHHHC--CCCcccHHHHHHHHHHHh------cccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC--CCc
Confidence 99997 999998 789999999999997642 2357999999999999999999999999998 643 336
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL 224 (299)
+|+.+.++++ +.++. ..+.++..+ .|... ..+|+ +.+..+
T Consensus 136 vp~~~~~~~~--------------------~~~~~-------~~~a~~~~~--~Gf~~iKik~g~---------~~~~~~ 177 (371)
T 2ps2_A 136 LPLISSIYVG--------------------EPEDM-------RARVAKYRA--KGYKGQSVKISG---------EPVTDA 177 (371)
T ss_dssp EEBEEEECSC--------------------CHHHH-------HHHHHHHHT--TTCCEEEEECCS---------CHHHHH
T ss_pred eEEEEEeCCC--------------------CHHHH-------HHHHHHHHH--hChheEEeecCC---------CHHHHH
Confidence 7778877653 12221 122233322 13111 12332 356667
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+- +. +|.+|.++++..|+++|+| +||||+.
T Consensus 178 e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~l~~~~~i-~iE~P~~ 226 (371)
T 2ps2_A 178 KRITAALANQQ--PDEFFIVDAN-------GK---------------LSVETALRLLRLLPHGLDF-ALEAPCA 226 (371)
T ss_dssp HHHHHHTTTCC--TTCEEEEECT-------TB---------------CCHHHHHHHHHHSCTTCCC-EEECCBS
T ss_pred HHHHHHHHhcC--CCCEEEEECC-------CC---------------cCHHHHHHHHHHHHhhcCC-cCcCCcC
Confidence 66654444455 4688899961 22 4568999999888799999 9999984
|
| >2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.8e-15 Score=141.91 Aligned_cols=208 Identities=22% Similarity=0.304 Sum_probs=139.6
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|..+.+ -.|+| ++++.|+|.|++|.. |-.|+..+++ .|.|.++..++..
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~~----~~~~~~~~~~~~~ 68 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGLV----------GIADAGDTSS----WYRGETQDSITSM 68 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSCE----------EEEECCCCCT----TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCCE----------EEEEEecccC----ccCCCCHHHHHHH
Confidence 78999998876 23444 679999999998853 4445544443 4788899999999
Q ss_pred HHHhHHH-HHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 69 INNDIAP-ALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 69 in~~i~p-~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|++.++| .|+ |.|+.++..+++.|. ++. +. +.+++.|+++|++.+.|+..|+|||++|+ |... -|+
T Consensus 69 i~~~l~~~~l~--G~d~~~~~~l~~~l~---~~~-~~--~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~--~~v 135 (397)
T 2qde_A 69 ICDFFAPKVLL--GEDPTKIEKIVGRMD---ILT-RD--NNQAKATVDFALHDLVGKRFGVPVYQLLG---GKTI--ERI 135 (397)
T ss_dssp HHHTHHHHTTT--TCCTTCHHHHHHHHH---HHC-SS--CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSC--SSE
T ss_pred HHHhhhhHhhc--CCChHhHHHHHHHhh---hhh-cc--chhHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCC--CCc
Confidence 9999999 898 789999999999883 332 22 57999999999999999999999999998 6432 366
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
|+.+.++. .+.++.. .+.++.++. |... ..+| .+.++.++
T Consensus 136 p~~~~~g~--------------------~~~e~~~-------~~a~~~~~~--Gf~~vKik~g---------~~~~~~~e 177 (397)
T 2qde_A 136 PLGLVLGA--------------------GEPEAVA-------EEALAVLRE--GFHFVKLKAG---------GPLKADIA 177 (397)
T ss_dssp EBCEECCC--------------------SCHHHHH-------HHHHHHHHH--TCSCEEEECC---------SCHHHHHH
T ss_pred ceEEECCC--------------------CCHHHHH-------HHHHHHHHh--hhhheeeccc---------CCHHHHHH
Confidence 66665521 1122111 122222221 3111 1223 14456666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++. +|.+|.+++.. .+++|+|.+||+|+.
T Consensus 178 ~v~avR~a~g--~d~~l~vDa-------n~~---------------~~~~~a~~~~~-~l~~~~i~~iEqP~~ 225 (397)
T 2qde_A 178 MVAEVRRAVG--DDVDLFIDI-------NGA---------------WTYDQALTTIR-ALEKYNLSKIEQPLP 225 (397)
T ss_dssp HHHHHHHHHC--TTSCEEEEC-------TTC---------------CCHHHHHHHHH-HHGGGCCSCEECCSC
T ss_pred HHHHHHHhhC--CCCEEEEEC-------CCC---------------CCHHHHHHHHH-HHHhCCCCEEECCCC
Confidence 6533333335 367888996 122 45688888755 678899999999986
|
| >1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=144.63 Aligned_cols=203 Identities=20% Similarity=0.301 Sum_probs=140.0
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++++. ...|.|.++..+++
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~--------------~~~~~~e~~~~~~~ 85 (393)
T 1wuf_A 20 MYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIHGYGELEAFP--------------LPDYTEETLSSAIL 85 (393)
T ss_dssp EECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEEEEECCCS--------------STTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCCEEEEEeecCC--------------CCcccCCCHHHHHH
Confidence 67888888766 34555 368999999999875 66555421 12588889999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ | ....+|+
T Consensus 86 ~i~~~l~p~l~--G~d~~~~~~l~~~l~~~~g-------~~~a~~aid~AlwDl~gk~~g~Pl~~lLG---g-~~~~v~~ 152 (393)
T 1wuf_A 86 IIKEQLLPLLA--QRKIRKPEEIQELFSWIQG-------NEMAKAAVELAVWDAFAKMEKRSLAKMIG---A-TKESIKV 152 (393)
T ss_dssp HHHHTTHHHHH--HCEESSTTHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---C-CCSEEEB
T ss_pred HHHHHHHHHHc--CCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCCccee
Confidence 99999999999 6899999999999977654 57899999999999999999999999998 6 3446777
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
+. .++.+ .+.++.+ .++++.+.+ |... ..+| | ++.++
T Consensus 153 ~~--~~g~~-------------------~~~e~~~-------~~a~~~~~~--G~~~~KiKvg------~-----~~d~~ 191 (393)
T 1wuf_A 153 GV--SIGLQ-------------------QNVETLL-------QLVNQYVDQ--GYERVKLKIA------P-----NKDIQ 191 (393)
T ss_dssp CE--EECCC-------------------SCHHHHH-------HHHHHHHHH--TCCEEEEECB------T-----TBSHH
T ss_pred eE--EeCCC-------------------CCHHHHH-------HHHHHHHHH--hhHhheeccC------h-----HHHHH
Confidence 65 22111 1222221 122222221 2101 1122 2 23345
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+ +||+++ + +++.|.+|+ ++.| |.+|. ++ .+.+++|+|.+||||+.
T Consensus 192 ~v-~avr~a-~-~~~~l~vDa-------N~~~---------------~~~~a-~~-~~~l~~~~i~~iEqP~~ 237 (393)
T 1wuf_A 192 FV-EAVRKS-F-PKLSLMADA-------NSAY---------------NREDF-LL-LKELDQYDLEMIEQPFG 237 (393)
T ss_dssp HH-HHHHTT-C-TTSEEEEEC-------TTCC---------------CGGGH-HH-HHTTGGGTCSEEECCSC
T ss_pred HH-HHHHHH-c-CCCEEEEEC-------CCCC---------------CHHHH-HH-HHHHHhCCCeEEECCCC
Confidence 53 566665 3 589999997 2333 33565 54 47788999999999986
|
| >3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=9.8e-16 Score=147.79 Aligned_cols=205 Identities=13% Similarity=0.151 Sum_probs=138.1
Q ss_pred CceeeEEEeEEe--------CC--CC-----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQIF--------DS--RG-----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~il--------Ds--rG-----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+= .| ++ +++|-|+|.|+ |.. .|.++ |
T Consensus 12 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~td-G~~G~GE~~-g-------------------------- 63 (392)
T 3p3b_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSI-H-------------------------- 63 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECC-S--------------------------
T ss_pred CeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEEC-CCEEEEecc-c--------------------------
Confidence 789988887651 22 33 78899999999 865 55544 1
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhC----C
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAG----N 140 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g----~ 140 (299)
.|+ .++|.|+ |.++.++..+. +.++.+++.|+++|++.+.|+..|+|||++|+ | .
T Consensus 64 ---~i~-~l~p~l~--G~d~~~~~~~~------------~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~ 122 (392)
T 3p3b_A 64 ---MTP-EWAEDVI--GRRLLDLFDDR------------GRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAHLET 122 (392)
T ss_dssp ---CCH-HHHHTTT--TCBGGGGBCTT------------SCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC---------
T ss_pred ---HHH-HHHHHhc--CCCHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc---Cccccc
Confidence 355 5889998 78998887664 24678999999999999999999999999998 5 3
Q ss_pred C-ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCC
Q psy12655 141 S-NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILD 219 (299)
Q Consensus 141 ~-~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~ 219 (299)
. ...+|+..-....|+.+..+.+++||.| ..+.++..+.-|...-..+|++|+|.|+.++
T Consensus 123 ~~~~~vp~~~s~~~~~~~~~~~~~~~~e~~-------------------~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~ 183 (392)
T 3p3b_A 123 GASLVVPCYDTSLYFDDLHLADERAAVALM-------------------QEEAMQGYAKGQRHFKIKVGRGGRHMPLWEG 183 (392)
T ss_dssp --CEEEEEEEEEECBTTTTCCSHHHHHHHH-------------------HHHHHHHHHTTCCCEEEECCHHHHTSCHHHH
T ss_pred cccCCcceeEeecccCCCCcccccchHHHH-------------------HHHHHHHHHhCCCEEEECcCcCcccCCcccc
Confidence 2 2345543211444444444444443332 1222333322111112246777888876667
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.++.+...-+.+|. ++.|.+|+ ++. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 184 ~~~~~e~v~avR~~~g~--d~~l~vDa-------n~~---------------~~~~~ai~~~~~-l~~~~i~~iE~P~~ 237 (392)
T 3p3b_A 184 TKRDIAIVRGISEVAGP--AGKIMIDA-------NNA---------------YNLNLTKEVLAA-LSDVNLYWLEEAFH 237 (392)
T ss_dssp HHHHHHHHHHHHHHHCT--TCCEEEEC-------TTC---------------CCHHHHHHHHHH-TTTSCEEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCC--CCeEEEEC-------CCC---------------CCHHHHHHHHHH-HHhcCCCEEecCCc
Confidence 78888888877777773 68888897 122 456888888776 68899999999985
|
| >2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-14 Score=137.33 Aligned_cols=206 Identities=21% Similarity=0.287 Sum_probs=142.7
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++. + ..|.|+++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~GE~~~-----------~-----~~~~~~~~~~~~~ 64 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGIIGYGEGVA-----------D-----DHVTGESWESTFH 64 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECC-----------C-----HHHHSCCHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCCEEEEEecC-----------C-----CCcCCCCHHHHHH
Confidence 78999988765 34555 378999999999865 554433 1 1467888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++.++++.|.... +.+.+++.|+++|++.+.|+..|+|||++|+ |.....+|+
T Consensus 65 ~i~~~l~~~l~--g~d~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~~ 133 (369)
T 2p8b_A 65 TLKHTLTPALI--GQNPMNIEKIHDMMDNTI------YGVPTAKAAIDIACFDIMGKKLNQPVYQLIG---GRYHEEFPV 133 (369)
T ss_dssp HHHHTHHHHHT--TCCTTCHHHHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCCCSCEEC
T ss_pred HHHHHHHHHHc--CCCcccHHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCceee
Confidence 99998999998 789999999999997765 2356999999999999999999999999998 653344554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
+ +.++++ +.++.. .+.++..+. |. .-..+|+ +.+..++
T Consensus 134 ~--~~i~~~--------------------~~~~~~-------~~a~~~~~~--Gf~~iKik~g~---------~~~~~~e 173 (369)
T 2p8b_A 134 T--HVLSIA--------------------DPENMA-------EEAASMIQK--GYQSFKMKVGT---------NVKEDVK 173 (369)
T ss_dssp C--EEECSC--------------------CHHHHH-------HHHHHHHHT--TCCEEEEECCS---------CHHHHHH
T ss_pred e--EEecCC--------------------ChHHHH-------HHHHHHHHc--CcCEEEEEeCC---------CHHHHHH
Confidence 3 444433 222211 222232221 31 1112332 4566677
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHH-HHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLT-ALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~eli-d~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| +++.|.+|+ ++.| |.+|.+ ++.. .+++|+|.+||||+.
T Consensus 174 ~v~avr~a~g--~~~~l~vDa-------n~~~---------------~~~~a~~~~~~-~l~~~~i~~iEqP~~ 222 (369)
T 2p8b_A 174 RIEAVRERVG--NDIAIRVDV-------NQGW---------------KNSANTLTALR-SLGHLNIDWIEQPVI 222 (369)
T ss_dssp HHHHHHHHHC--TTSEEEEEC-------TTTT---------------BSHHHHHHHHH-TSTTSCCSCEECCBC
T ss_pred HHHHHHHHhC--CCCeEEEEC-------CCCC---------------CHHHHHHHHHH-HHHhCCCcEEECCCC
Confidence 6665555556 367888996 2333 346777 7765 478899999999985
|
| >1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=7.2e-14 Score=134.51 Aligned_cols=215 Identities=18% Similarity=0.194 Sum_probs=142.0
Q ss_pred CceeeEEEeEE-e-----CCCC----CeeEEEEEEEC---CCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI-F-----DSRG----NPTVEVDLTTE---LGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i-l-----DsrG----~pTvevev~~~---~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+-..+ + +|+| .+++-|+|.|+ +|.. .|-+++| +.+.++ .
T Consensus 6 mkI~~i~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~~G~GE~~~~------------------~~~~~~---~ 64 (392)
T 1tzz_A 6 VRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNS------------------NGRYGQ---G 64 (392)
T ss_dssp CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEECC------------------TTSCCC---H
T ss_pred cEEeEEEEEEecCCCcccccccccCcceEEEEEEEECCCCCCCEEEEEecCC------------------CchHHH---H
Confidence 67888883333 1 2322 47899999999 8876 6666542 112233 4
Q ss_pred HHHHHhHHHHHhcCCCCc----------cchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 67 GFINNDIAPALLKESFEV----------TQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~----------~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
..|++.++|.|+ |.++ .++..|++.|...+.+.+++ ++.+|+.|+++|++.+.|+..|+|||++|++
T Consensus 65 ~~i~~~l~~~l~--G~d~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~a~~aid~AlwDl~ak~~g~Pl~~llG~ 141 (392)
T 1tzz_A 65 GLIRERFASRIL--EADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHG-ERSVAVGTIDMAVWDAVAKIAGKPLFRLLAE 141 (392)
T ss_dssp HHHHHTHHHHHH--TSCGGGSBCTTSSSBCHHHHHHHHTTTCCSCCCS-HHHHHHHHHHHHHHHHHHHHHTSBHHHHHHH
T ss_pred HHHHHHHHHHHc--CCCchhhhcccccccCHHHHHHHHHHhccccCcc-HHHHHHHHHHHHHHHHHHHHcCCcHHHHcCC
Confidence 456667999999 7899 99999999998888777766 7789999999999999999999999999985
Q ss_pred hhCCCccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcC
Q psy12655 137 LAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFA 214 (299)
Q Consensus 137 l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfa 214 (299)
.++.. ..-++|+.++ +|+.|++ .+.++ +..++++.++ .|... ..+|+
T Consensus 142 ~~~g~-~~~~v~~y~~-~~~~~~~---------------~~~~~-------~~~~a~~~~~--~Gf~~iKik~g~----- 190 (392)
T 1tzz_A 142 RHGVK-ANPRVFVYAA-GGYYYPG---------------KGLSM-------LRGEMRGYLD--RGYNVVKMKIGG----- 190 (392)
T ss_dssp HTTSC-CCCEEEEEEE-CCCC-------------------CHHH-------HHHHHHHHHT--TTCSEEEEECSS-----
T ss_pred ccCCC-cCCCeeEEEe-CCcccCC---------------CCHHH-------HHHHHHHHHH--cCCCEEEEcCCC-----
Confidence 44321 2356777765 6666542 12222 2233344433 24211 12332
Q ss_pred CCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEee
Q psy12655 215 PNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIE 294 (299)
Q Consensus 215 p~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiE 294 (299)
.++++.++.|...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||
T Consensus 191 ---~~~~~~~e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE 242 (392)
T 1tzz_A 191 ---APIEEDRMRIEAVLEEIG--KDAQLAVDAN-------GR---------------FNLETGIAYAKM-LRDYPLFWYE 242 (392)
T ss_dssp ---SCHHHHHHHHHHHHHHHT--TTCEEEEECT-------TC---------------CCHHHHHHHHHH-HTTSCCSEEE
T ss_pred ---CCHHHHHHHHHHHHHhcC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHHcCCCeec
Confidence 235666666655444455 4688889971 22 456888888766 6889999999
Q ss_pred cCCC
Q psy12655 295 DPML 298 (299)
Q Consensus 295 Dp~~ 298 (299)
||+.
T Consensus 243 qP~~ 246 (392)
T 1tzz_A 243 EVGD 246 (392)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9986
|
| >4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.9e-14 Score=137.10 Aligned_cols=215 Identities=19% Similarity=0.320 Sum_probs=139.9
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
+|++|+.+.+-++|.|.++ |+|.|++|.. .|.+..+ +.+.++ ...|++.|+|.|+
T Consensus 27 ~It~v~~~~v~~~~~~~vl-V~v~Td~G~~G~GEa~~~------------------~~~~~~---~~~i~~~lap~Li-- 82 (421)
T 4hnl_A 27 IITDVKSFAIKPDRHNLVV-VKVETNKGISGLGCSTFQ------------------FRPLAV---KTVVDEYLRPLLM-- 82 (421)
T ss_dssp BEEEEEEEEECSSSSCEEE-EEEEETTSCCEEEECCCT------------------TSHHHH---HHHHHHTHHHHHT--
T ss_pred eEEEEEEEEECCCCceEEE-EEEEECCCCEEEEeccCC------------------CCHHHH---HHHHHHHHHHHHC--
Confidence 5999999999999999887 9999999975 4433211 122223 3456788999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|+.+++.|.+.|. .+.......++.+|+.|+.+|++-+.|+..|+|||++|+ |..... +|..+.+.++
T Consensus 83 G~dp~~ie~i~~~~~-~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~--v~~y~~~~~~---- 152 (421)
T 4hnl_A 83 GRDANEIEDIWQVMN-VNSYWRNGPITNNAISGIDMALWDIKGQLADMPLYQLLG---GKARTA--IPAYTHAVAD---- 152 (421)
T ss_dssp TCBTTCHHHHHHHHH-HTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSC--EEEEEEEEES----
T ss_pred CCChhhHHHHHHHHH-hhccccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcC---CccCcc--cceecccCCC----
Confidence 799999999988774 344444445567899999999999999999999999998 654333 4445443321
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh-------hcCC----CCcccCCCCCcCCCCCCh----HHHHH
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINT-------KFGL----DATAVGDEGGFAPNILDN----KEGLR 225 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~-------k~G~----~~t~vgdeGgfap~~~~~----e~aL~ 225 (299)
+..+. ...+++.+.+ |.|. .....+++.++.....+. ++.++
T Consensus 153 ----------------~~~~~-------~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 209 (421)
T 4hnl_A 153 ----------------NLDDL-------YHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLK 209 (421)
T ss_dssp ----------------SHHHH-------HHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHH
T ss_pred ----------------CHHHH-------HHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHH
Confidence 22222 2333333332 1111 011223344444444333 44444
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| +++.|.+|+. ..+|.+|.+.+. +.+++|+|.+||||+.
T Consensus 210 ~v~avR~a~G--~~~~l~vDan----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~ 257 (421)
T 4hnl_A 210 MFAAIKEKYG--NQFQMLHDVH----------------------ERLHPNQAIQFA-KAAEPYQLFFLEDILP 257 (421)
T ss_dssp HHHHHHHHHT--TSSEEEEECT----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSC
T ss_pred HHHHHHHHhC--CCceEecccc----------------------ccCCHHHHHHHH-HHhhhhhhcccccCCc
Confidence 4444444444 5799999962 124567777664 5568999999999986
|
| >2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.5e-14 Score=132.94 Aligned_cols=202 Identities=16% Similarity=0.164 Sum_probs=142.3
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++. + ..|.|.++..++.
T Consensus 2 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 65 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASP-----------S-----FRVNGERVEALLA 65 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECC-----------C-----HHHHCCCHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCCEEEEEecC-----------C-----CCcCCCCHHHHHH
Confidence 68998888766 23444 478999999999875 554432 1 1467888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+++ ++|.|+ |.++.++..+++.| .. ...+.+++.|+++|++.+.|+..|+|||++|+ | ....+|+
T Consensus 66 ~i~~-l~~~l~--g~d~~~~~~~~~~l-~~------~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~ 131 (345)
T 2zad_A 66 IENA-VREMIT--GIDVRNYARIFEIT-DR------LFGFPSLKAAVQFATLDALSQELGTQVCYLLG---G-KRDEIET 131 (345)
T ss_dssp THHH-HHHHHT--TCBGGGHHHHHHHH-TT------CTTSHHHHHHHHHHHHHHHHHHHTSCHHHHTT---C-CCSEEEB
T ss_pred HHHH-HHHHhC--CCChhhHHHHHHHH-HH------hccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCceee
Confidence 9998 999998 78999999999988 22 13467999999999999999999999999998 7 3445666
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
+. .++++ +.++.. .+.++..+. |... ..+|+ +.++.++
T Consensus 132 ~~--~~~~~--------------------~~~~~~-------~~a~~~~~~--Gf~~iKik~g~---------~~~~d~~ 171 (345)
T 2zad_A 132 DK--TVGID--------------------TVENRV-------KEAKKIFEE--GFRVIKIKVGE---------NLKEDIE 171 (345)
T ss_dssp CE--EECSC--------------------CHHHHH-------HHHHHHHHT--TCSEEEEECCS---------CHHHHHH
T ss_pred eE--EecCC--------------------CHHHHH-------HHHHHHHHc--CcCEEEEeecC---------CHHHHHH
Confidence 53 34332 222211 222332221 3111 12332 5778888
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCee--EeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIV--SIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIv--siEDp~~ 298 (299)
.+ +||+++| +++.|.+|+ ++. +|.+|.+++... +++|+|. +||+|+.
T Consensus 172 ~v-~avr~~g--~~~~l~vDa-------n~~---------------~~~~~a~~~~~~-l~~~~i~~~~iE~P~~ 220 (345)
T 2zad_A 172 AV-EEIAKVT--RGAKYIVDA-------NMG---------------YTQKEAVEFARA-VYQKGIDIAVYEQPVR 220 (345)
T ss_dssp HH-HHHHHHS--TTCEEEEEC-------TTC---------------SCHHHHHHHHHH-HHHTTCCCSEEECCSC
T ss_pred HH-HHHHhhC--CCCeEEEEC-------CCC---------------CCHHHHHHHHHH-HHhcCCCeeeeeCCCC
Confidence 86 7777775 578888996 122 456888887655 7889999 9999985
|
| >1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-13 Score=131.67 Aligned_cols=205 Identities=21% Similarity=0.267 Sum_probs=141.6
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -+|+|. ++|.|+|.|++|.. .|-++. + ..|.|.++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~~~~~~~~~ 64 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPP-----------T-----LVITGDSMDSIES 64 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECC-----------C-----TTTTCCCHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCCEEEEEecC-----------C-----CCcCCCCHHHHHH
Confidence 88999988765 346663 57999999999865 554433 1 1477888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.|++.++|.|+ |.++.++..+++.|... ++ +.+++.|+++|++.+.|+..|+|||++|+ | ....+|
T Consensus 65 ~l~~~l~~~l~--g~~~~~~~~~~~~l~~~~~~-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~ 131 (366)
T 1tkk_A 65 AIHHVLKPALL--GKSLAGYEAILHDIQHLLTG-------NMSAKAAVEMALYDGWAQMCGLPLYQMLG---G-YRDTLE 131 (366)
T ss_dssp HHHHTHHHHHT--TCBGGGHHHHHHHHHHSSSS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---C-CCSEEE
T ss_pred HHHHHHHHHHc--CCCcccHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---C-CCCcee
Confidence 99998999998 78999999999988663 32 46899999999999999999999999998 6 344566
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
++. .++++ +.++.. .+.++.++. |. +-..+|. .+.++.+
T Consensus 132 ~~~--~~~~~--------------------~~~~~~-------~~a~~~~~~--Gf~~iKik~g~--------~~~~~d~ 172 (366)
T 1tkk_A 132 TDY--TVSVN--------------------SPEEMA-------ADAENYLKQ--GFQTLKIKVGK--------DDIATDI 172 (366)
T ss_dssp BCE--EECSC--------------------CHHHHH-------HHHHHHHHH--TCCEEEEECCS--------SCHHHHH
T ss_pred eeE--EecCC--------------------CHHHHH-------HHHHHHHHc--CCCeEEEEeCC--------CCHHHHH
Confidence 542 33332 222211 122222221 21 1112332 1456666
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+- +. +|.+|.+++... +++ |+|.+||||+.
T Consensus 173 ~~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~~~i~~iEqP~~ 223 (366)
T 1tkk_A 173 ARIQEIRKRVG--SAVKLRLDAN-------QG---------------WRPKEAVTAIRK-MEDAGLGIELVEQPVH 223 (366)
T ss_dssp HHHHHHHHHHC--SSSEEEEECT-------TC---------------SCHHHHHHHHHH-HHHTTCCEEEEECCSC
T ss_pred HHHHHHHHHhC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HhhcCCCceEEECCCC
Confidence 66655545555 3688899961 22 456888888776 567 99999999985
|
| >2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-13 Score=131.45 Aligned_cols=209 Identities=18% Similarity=0.215 Sum_probs=138.9
Q ss_pred CceeeEEEeEE--------eCCCCCe-----eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGNP-----TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~p-----Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -+|+|.- +|-|+|.|++|.. .|-+++. | .+...++
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~~G~Ge~~~~---g-----------------~~~~~~~ 61 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV---N-----------------HGGAAVA 61 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE---S-----------------SSHHHHH
T ss_pred CceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCCEEEEeecCC---C-----------------CchHHHH
Confidence 58999988776 3666643 7999999999976 6655431 1 0123456
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
..|++.++|.|+ |.|+.++..+++.|.. +.++.+ +.++.+|+.|+++|++.+.|+..|+|||++|+ |. +-
T Consensus 62 ~~i~~~l~~~l~--G~d~~~~~~~~~~l~~~~~~~~~-~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~---~~ 132 (371)
T 2ovl_A 62 TMVDKDLRGCLL--GADAEQIEKIWQSMWWRLHYAGR-GGHATSAISAVDIALWDLKGIRARTPLWKLFG---GY---DP 132 (371)
T ss_dssp HHHHHTTHHHHT--TSCTTCHHHHHHHHHHHTCTTCS-STHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC---CS
T ss_pred HHHHHHHHHHhc--CCCcccHHHHHHHHHHHhhhcCC-chHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC---CC
Confidence 667888999998 7899999999999866 455443 34557899999999999999999999999998 64 35
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
++|+.+. ||.|. .+.|+ .. .+.++..+. |. .-..+|. .++++.
T Consensus 133 ~v~~y~~--~~~~~---~~~e~-------------~~-------~~a~~~~~~--Gf~~iKik~g~--------~~~~~~ 177 (371)
T 2ovl_A 133 VVPVYAG--GIDLE---LPVAD-------------LK-------TQADRFLAG--GFRAIKMKVGR--------PDLKED 177 (371)
T ss_dssp EEEEEEE--CCBTT---SCHHH-------------HH-------HHHHHHHHT--TCSCEEEECCC--------SSHHHH
T ss_pred CeeEEEe--CCCcC---CCHHH-------------HH-------HHHHHHHHc--CCCEEEECCCC--------CCHHHH
Confidence 6777764 44431 12222 11 122222221 31 1112332 145666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+. + .+|.+|.+++... +++|+|.+||+|+.
T Consensus 178 ~e~v~avr~a~G--~d~~l~vDan-------~---------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 227 (371)
T 2ovl_A 178 VDRVSALREHLG--DSFPLMVDAN-------M---------------KWTVDGAIRAARA-LAPFDLHWIEEPTI 227 (371)
T ss_dssp HHHHHHHHHHHC--TTSCEEEECT-------T---------------CSCHHHHHHHHHH-HGGGCCSEEECCSC
T ss_pred HHHHHHHHHHhC--CCCeEEEECC-------C---------------CCCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 666655444455 3677888861 1 2456888888765 68899999999985
|
| >2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B | Back alignment and structure |
|---|
Probab=99.58 E-value=5e-14 Score=134.89 Aligned_cols=206 Identities=17% Similarity=0.220 Sum_probs=138.8
Q ss_pred CceeeEEEeEE--------eCCCCC------eeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN------PTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~------pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -.|+|. ++|.|+|.|++|.. |-.|+..+ + ..|.|.++..+.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~--~--~~~~~~~~~~~~ 68 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVT----------GWGEGCPW--G--HSYLPAHGPGLR 68 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCE----------EEEEECCS--T--TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCCE----------EEEEEecC--C--CCcCCCCHHHHH
Confidence 78999998865 456775 68999999999854 33344333 1 258889999999
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|+ .++|.|+ |.|+.++..+++.|... . +. +.+++.|+++|++.+.|+..|+|||++|+ |.... +
T Consensus 69 ~~l~-~l~~~l~--g~d~~~~~~~~~~l~~~---~-~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~--~ 134 (378)
T 2qdd_A 69 AGIA-TLAPHLL--GLDPRSLDHVNRVMDLQ---L-PG--HSYVKSPIDMACWDILGQVAGLPLWQLLG---GEAAT--P 134 (378)
T ss_dssp HHHH-HHHHHHT--TCCTTCHHHHHHHHHHH---S-CS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSSCC--C
T ss_pred HHHH-HHHHHHC--CCCccCHHHHHHHHHHh---h-cc--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCC--C
Confidence 9999 7999998 78999999999988332 1 12 57999999999999999999999999998 64323 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~aL 224 (299)
+|+.+.++.+ +.++..+ +.++..+. |.. -..+|. | +.++.+
T Consensus 135 v~~~~~~~~~--------------------~~e~~~~-------~a~~~~~~--Gf~~iKik~g~-----~---~~~~~~ 177 (378)
T 2qdd_A 135 VPINSSISTG--------------------TPDQMLG-------LIAEAAAQ--GYRTHSAKIGG-----S---DPAQDI 177 (378)
T ss_dssp EEBEEEECSC--------------------CHHHHHH-------HHHHHHHH--TCCEEEEECCS-----S---CHHHHH
T ss_pred CceEEEecCC--------------------CHHHHHH-------HHHHHHHH--hhhheeecCCC-----C---ChHHHH
Confidence 5555555211 2222111 22222221 310 012221 1 456677
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+- +. +|.+|.++++..| + |+| +||||+.
T Consensus 178 e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~l-~-~~i-~iEqP~~ 224 (378)
T 2qdd_A 178 ARIEAISAGLP--DGHRVTFDVN-------RA---------------WTPAIAVEVLNSV-R-ARD-WIEQPCQ 224 (378)
T ss_dssp HHHHHHHHSCC--TTCEEEEECT-------TC---------------CCHHHHHHHHTSC-C-CCC-EEECCSS
T ss_pred HHHHHHHHHhC--CCCEEEEeCC-------CC---------------CCHHHHHHHHHHh-C-CCc-EEEcCCC
Confidence 76665544455 3678899961 22 4568999999888 5 999 9999984
|
| >1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-14 Score=139.16 Aligned_cols=211 Identities=20% Similarity=0.249 Sum_probs=136.5
Q ss_pred eeEEEEEEECCCce-EEEe-ecCCC-CcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHH
Q psy12655 18 PTVEVDLTTELGLF-RAAV-PSGAS-TGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFM 94 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~-psGaS-~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L 94 (299)
++|.|+|.|++|.. .|-+ |.+.| +|.+|+.+. ...++..|++.++|.|+ |.++.++..|++.|
T Consensus 51 ~~v~V~v~td~G~~G~GE~~~~~~~g~g~~e~~~~------------~~~~~~~i~~~l~p~L~--G~d~~~~~~i~~~l 116 (413)
T 1kcz_A 51 ESISVLLVLEDGQVAHGDCAAVQYSGAGGRDPLFL------------AKDFIPVIEKEIAPKLI--GREITNFKPMAEEF 116 (413)
T ss_dssp CEEEEEEEETTSCEEEEEECCCTTTTSTTSCSCCC------------HHHHHHHHHHHTHHHHT--TCBCCCHHHHHHHH
T ss_pred cEEEEEEEECCCCEEEEEEccccccccCccccccc------------HHHHHHHHHHHHHHHHc--CCChhhHHHHHHHH
Confidence 57999999999987 6644 45544 666655442 35677788888999998 78999999999988
Q ss_pred HhhcCCCCc-ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEec
Q psy12655 95 IKLDGTENK-SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPT 173 (299)
Q Consensus 95 ~~lDgT~nk-s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ 173 (299)
.. +.++ ..++.|++.|+++|++.+.|+..++|||++|+..++....+.|+|+.+ ++|- . ++
T Consensus 117 ~~---~~~~g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~~~~~~~vp~~~--~~g~---~-------~~--- 178 (413)
T 1kcz_A 117 DK---MTVNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRDEYNPGAEINAVPVFA--QSGD---D-------RY--- 178 (413)
T ss_dssp HH---CEETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHSTTCCCCCCCEEC--CCTT---C-------TT---
T ss_pred Hh---cccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhcccccCcCccCCeeeeE--ecCc---c-------cc---
Confidence 43 3222 246789999999999999999999999999983211112356888887 3331 0 00
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhhcC-C--CCcccCCCCCcCCCCCChHH----HHHHHHHHH-HHcccccceEEEee
Q psy12655 174 GASSFSEAMKIGSEVYHHLKKVINTKFG-L--DATAVGDEGGFAPNILDNKE----GLRLIVEAI-EKAGYTGKVEIGMD 245 (299)
Q Consensus 174 ga~s~~eal~~~~ev~~~l~~~l~~k~G-~--~~t~vgdeGgfap~~~~~e~----aL~ll~eAi-~~ag~~~~i~ialD 245 (299)
.+. .+...+.++.+. .| . +-..+|+.+ ...++ .++. .+|| +..|+ ++.|.+|
T Consensus 179 --~~~-------~~~~~~a~~~~~--~G~~~~~KiKvG~~~------~~~~~~~~~d~~~-v~avR~~~G~--~~~l~vD 238 (413)
T 1kcz_A 179 --DNV-------DKMIIKEADVLP--HALINNVEEKLGLKG------EKLLEYVKWLRDR-IIKLRVREDY--APIFHID 238 (413)
T ss_dssp --HHH-------HHHHHTTCSEEE--ECCCCCCCCCCCTTS------HHHHHHHHHHHHH-HHHHCSSTTC--CCEEEEE
T ss_pred --CCH-------HHHHHHHHHHHH--hcchhheeeccCCCc------cchhhHHHHHHHH-HHHHHHhcCC--CceEEEe
Confidence 011 111222222222 12 1 111223210 00223 2333 3445 44454 6999999
Q ss_pred cccc--ccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc-CCee-EeecCCC
Q psy12655 246 VAAS--EFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE-YPIV-SIEDPML 298 (299)
Q Consensus 246 ~AAs--e~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~-yPIv-siEDp~~ 298 (299)
+..+ +||. +|.+|.++++..|.+. +||. +||||+.
T Consensus 239 aN~~~~~~~~------------------~~~~~a~~~~~~L~~~~~~i~~~iEqP~~ 277 (413)
T 1kcz_A 239 VYGTIGAAFD------------------VDIKAMADYIQTLAEAAKPFHLRIEGPMD 277 (413)
T ss_dssp CTTHHHHHTT------------------TCHHHHHHHHHHHHHHHTTSCEEEECSBC
T ss_pred cCCCcccccC------------------CCHHHHHHHHHHHHhhcCCcceEEecCCC
Confidence 9888 7761 3568999999999887 7977 9999983
|
| >1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.2e-13 Score=127.93 Aligned_cols=208 Identities=15% Similarity=0.196 Sum_probs=141.4
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|..+.+ -.|+| .+++-|+|.| +|.. .|-+ |.| + ..|.|.++..++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-~G~~G~GE~~~~~--------------~-~~~~~e~~~~~~ 64 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVG--------------G-PTWGSESAETIK 64 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCST--------------T-TTTSSCCHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEE-CCEEEEEEeccCC--------------C-CcccCCCHHHHH
Confidence 78999988765 12343 4578899999 8865 5544 332 1 258888899999
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|++.++|.|+ |.|+.++..+++.|.... +.+.+++.|+++|++.+.|+..|+|||++|+ |.....+|
T Consensus 65 ~~i~~~l~~~l~--G~d~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~ 133 (370)
T 1nu5_A 65 VIIDNYLAPLLV--GKDASNLSQARVLMDRAV------TGNLSAKAAIDIALHDLKARALNLSIADLIG---GTMRTSIP 133 (370)
T ss_dssp HHHHHTHHHHHT--TSBTTCHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CCSCSEEE
T ss_pred HHHHHhhHHHHc--CCCcccHHHHHHHHHHHh------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCcCCceE
Confidence 999999999998 789999999999997764 2357899999999999999999999999998 75444566
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL 224 (299)
++ +.+++| +.++.+ .+.++.++ ..|... ..+|. .++++.+
T Consensus 134 ~~--~~~~~~--------------------~~e~~~-------~~a~~~~~-~~Gf~~iKik~g~--------~~~~~~~ 175 (370)
T 1nu5_A 134 IA--WTLASG--------------------DTARDI-------DSALEMIE-TRRHNRFKVKLGA--------RTPAQDL 175 (370)
T ss_dssp BC--EEECSS--------------------CHHHHH-------HHHHHHHH-TTSCSEEEEECSS--------SCHHHHH
T ss_pred ee--EEecCC--------------------CHHHHH-------HHHHHHHH-hCCccEEEEecCC--------CChHHHH
Confidence 65 455433 112211 12233332 013111 12232 1345555
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+. +. +|.+|.+++.. .+++|+|.+||||+.
T Consensus 176 e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~-~l~~~~i~~iEqP~~ 224 (370)
T 1nu5_A 176 EHIRSIVKAVG--DRASVRVDVN-------QG---------------WDEQTASIWIP-RLEEAGVELVEQPVP 224 (370)
T ss_dssp HHHHHHHHHHG--GGCEEEEECT-------TC---------------CCHHHHHHHHH-HHHHHTCCEEECCSC
T ss_pred HHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHH-HHHhcCcceEeCCCC
Confidence 55554444445 3678999961 22 45688888765 678899999999985
|
| >2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A | Back alignment and structure |
|---|
Probab=99.55 E-value=9.9e-14 Score=133.39 Aligned_cols=188 Identities=15% Similarity=0.134 Sum_probs=122.2
Q ss_pred eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhh
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKL 97 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l 97 (299)
+|.|+|.|++|.. .|-+++. | . + ...+..|++.++|.|+ |.|+.++..|++.|.++
T Consensus 52 ~~~V~v~td~G~~G~GE~~~~---~----------~-----~---~~~~~~i~~~l~~~l~--G~d~~~~~~i~~~l~~~ 108 (388)
T 2nql_A 52 SVLVRMTTEAGTVGWGETYGI---V----------A-----P---GAVAALINDLLAGFVI--GRDASDPSAVYDDLYDM 108 (388)
T ss_dssp EEEEEEEETTCCEEEEEEECS---S----------C-----H---HHHHHHHHHTHHHHHT--TCCSSSHHHHHHHHHHH
T ss_pred EEEEEEEECCCCEEEEEecCC---C----------C-----c---HHHHHHHHHHHHHHhc--CCCcccHHHHHHHHHhh
Confidence 7999999999986 7776653 1 0 1 1345667778999998 78999999999999654
Q ss_pred cCCCCcc--cCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCC
Q psy12655 98 DGTENKS--KFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA 175 (299)
Q Consensus 98 DgT~nks--~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga 175 (299)
+|.+++ .++.|++.|+++|++.+.|+..|+|||++|+ |. ...+ |..+.+ |.|. +.|+|
T Consensus 109 -~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~v--p~~~~~--g~~~----~~e~~------- 168 (388)
T 2nql_A 109 -MRVRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLG---GG-VDSF--PAYVSG--LPER----TLKAR------- 168 (388)
T ss_dssp -HGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-CSEE--EEEEEC--CCCS----SHHHH-------
T ss_pred -cccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCce--EeeEEe--CCCC----CHHHH-------
Confidence 444444 2357999999999999999999999999998 65 2334 445443 2211 22322
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeecccccccc
Q psy12655 176 SSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFK 253 (299)
Q Consensus 176 ~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~ 253 (299)
. .+.++..+. |. .-..+|+ ++ .+. ++.+...-+.+| .++.|.+|+
T Consensus 169 ------~-------~~a~~~~~~--Gf~~vKik~g~-----~~---~~~-~e~v~avr~a~g--~d~~l~vDa------- 215 (388)
T 2nql_A 169 ------G-------ELAKYWQDR--GFNAFKFATPV-----AD---DGP-AAEIANLRQVLG--PQAKIAADM------- 215 (388)
T ss_dssp ------H-------HHHHHHHHT--TCCEEEEEGGG-----CT---TCH-HHHHHHHHHHHC--TTSEEEEEC-------
T ss_pred ------H-------HHHHHHHHh--CCCEEEEeCCC-----CC---hHH-HHHHHHHHHHhC--CCCEEEEEC-------
Confidence 1 122222221 31 0112332 23 334 444444434445 368888986
Q ss_pred CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 254 EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 254 ~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 216 n~~---------------~~~~~a~~~~~~-l~~~~i~~iEqP~~ 244 (388)
T 2nql_A 216 HWN---------------QTPERALELIAE-MQPFDPWFAEAPVW 244 (388)
T ss_dssp CSC---------------SCHHHHHHHHHH-HGGGCCSCEECCSC
T ss_pred CCC---------------CCHHHHHHHHHH-HhhcCCCEEECCCC
Confidence 122 456888888765 78899999999986
|
| >1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.1e-14 Score=133.61 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=95.7
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .+++-|+|.|++| . .|-++.. . . ..|.|.++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~G~GE~~~~-----------~--~-~~~~~e~~~~~~~ 65 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-EGWGECVTM-----------A--G-PLYSSEYNDGAEH 65 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-EEEEECCCB-----------S--S-SSSSSCBHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-EEEEEecCC-----------C--C-CccccCcHHHHHH
Confidence 789988877552 3455 5789999999887 5 5555432 1 1 2588889999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++.++++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ |. ...+|+
T Consensus 66 ~i~~~l~~~l~--g~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~~~~ 132 (368)
T 1sjd_A 66 VLRHYLIPALL--AAEDITAAKVTPLLAKFKG-------HRMAKGALEMAVLDAELRAHERSFAAELG---SV-RDSVPC 132 (368)
T ss_dssp HHHHTHHHHHH--HSSSCCHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CC-CSEEEB
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCccc
Confidence 99999999999 6899999999998866654 56899999999999999999999999998 64 345666
Q ss_pred c
Q psy12655 148 P 148 (299)
Q Consensus 148 P 148 (299)
+
T Consensus 133 ~ 133 (368)
T 1sjd_A 133 G 133 (368)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-13 Score=133.62 Aligned_cols=209 Identities=19% Similarity=0.217 Sum_probs=134.7
Q ss_pred CceeeEEEeEEe--------CCCC----------CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCcc
Q psy12655 1 MPISKIHARQIF--------DSRG----------NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----------~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkg 61 (299)
|+|++|..+.+- .|+| +++|-|+|.|++|.. .|-+|++. +.+.+
T Consensus 13 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-----------------~~~~~ 75 (393)
T 2og9_A 13 DRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSYSKR-----------------AGGPG 75 (393)
T ss_dssp CCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEEEES-----------------TTHHH
T ss_pred CeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCEEEEEecCcc-----------------cchHH
Confidence 689999988772 3443 478999999999976 77666531 22223
Q ss_pred HHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 62 v~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
+..+ ++ .++|.|+ |.++.++..+++.|...+. +.+ +.++.+|+.|+++|++.+.|+..|+|||++|+ |.
T Consensus 76 ~~~~---i~-~l~~~l~--G~d~~~~~~i~~~l~~~~~~~~~-~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g~ 145 (393)
T 2og9_A 76 QFAH---AR-EIAPALI--GEDPSDIAKLWDKLCWAGASAGR-SGLSTQAIGAFDVALWDLKAKRAGLSLAKLLG---SY 145 (393)
T ss_dssp HHHH---HH-HHGGGGT--TSCTTCHHHHHHHHHHTTGGGCS-SSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHC---CS
T ss_pred HHHH---HH-HHHHHHc--CCChhhHHHHHHHHHHhhhhcCC-chHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC
Confidence 4444 34 4899998 7899999999999987653 222 33556999999999999999999999999998 65
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCC
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNIL 218 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~ 218 (299)
.-++|+.+.+ ||.|. .+.|+| . .+.++..+ .|... ..+|. .
T Consensus 146 ---~~~vp~y~~~-g~~~~---~~~e~~-------------~-------~~a~~~~~--~Gf~~vKik~g~--------~ 188 (393)
T 2og9_A 146 ---RDSVRCYNTS-GGFLH---TPIDQL-------------M-------VNASASIE--RGIGGIKLKVGQ--------P 188 (393)
T ss_dssp ---CSEEEEEBCT-TCCTT---SCHHHH-------------H-------HHHHHHHH--TTCCCEEEECCC--------S
T ss_pred ---CCceEEEEEC-CCcCC---CCHHHH-------------H-------HHHHHHHH--cCCCEEEEecCC--------C
Confidence 3567776655 33321 122222 1 12222222 13111 12221 1
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+..++.+...-+..| .++.|.+|+ ++. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 189 ~~~~~~e~v~avR~avg--~d~~l~vDa-------n~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 243 (393)
T 2og9_A 189 DGALDIARVTAVRKHLG--DAVPLMVDA-------NQQ---------------WDRPTAQRMCRI-FEPFNLVWIEEPLD 243 (393)
T ss_dssp CHHHHHHHHHHHHHHHC--TTSCEEEEC-------TTC---------------CCHHHHHHHHHH-HGGGCCSCEECCSC
T ss_pred CHHHHHHHHHHHHHHcC--CCCEEEEEC-------CCC---------------CCHHHHHHHHHH-HHhhCCCEEECCCC
Confidence 35666666633333335 367888885 122 456888888866 68899999999985
|
| >2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.4e-14 Score=132.71 Aligned_cols=202 Identities=19% Similarity=0.269 Sum_probs=136.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .++|-|+|.| +|.. .|-+++. . . ..|.|.++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-dG~~G~GE~~~~-----------~--~-~~~~~e~~~~~~~ 65 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFG-EGLEGLGEGVME-----------R--L-PLYREETVAGARY 65 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEECCCB-----------S--S-CSSSSCBHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEE-CCeEEEEEeccC-----------C--C-CcccCCCHHHHHH
Confidence 789988887552 3455 5789999999 4765 5555432 1 1 2588899999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+++.++|.|+ |.++.++.++++.|..++| +.+++.|+++|++.+.|+..|+|||++|+ |. ...+|+
T Consensus 66 ~i~~~l~~~l~--G~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~~~~ 132 (369)
T 2zc8_A 66 LLEEVFLPRVL--GRDLPNPEALREALAPFRG-------NPMAKAVLEMAFFDLWAKALGRPLWQVLG---GV-RQAVEV 132 (369)
T ss_dssp HHHHTHHHHHT--TCBCSSHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CC-CSEEEB
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceec
Confidence 99999999998 7899999999998866654 56899999999999999999999999998 64 234665
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc--ccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT--AVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t--~vgdeGgfap~~~~~e~aL~ 225 (299)
+ +++ |.| .+.++.. .+.++.++. |.... .++ | ++.++
T Consensus 133 ~-~~~---g~~-----------------~~~~~~~-------~~a~~~~~~--G~~~iKik~~------~-----~~d~~ 171 (369)
T 2zc8_A 133 G-VSL---GIQ-----------------PSVEDTL-------RVVERHLEE--GYRRIKLKIK------P-----GWDYE 171 (369)
T ss_dssp C-EEE---CCC-----------------SSHHHHH-------HHHHHHHHT--TCSCEEEECB------T-----TBSHH
T ss_pred e-EEe---cCC-----------------CCHHHHH-------HHHHHHHHh--hhheeeeecC------h-----hHHHH
Confidence 5 232 322 1222211 222333321 31111 121 2 34455
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+ +||+++ + +++.|.+|+ ++.| |.+| +++... +++|+|.+||||+.
T Consensus 172 ~v-~avr~a-~-~~~~l~vDa-------n~~~---------------~~~~-~~~~~~-l~~~~i~~iEqP~~ 217 (369)
T 2zc8_A 172 VL-KAVREA-F-PEATLTADA-------NSAY---------------SLAN-LAQLKR-LDELRLDYIEQPLA 217 (369)
T ss_dssp HH-HHHHHH-C-TTSCEEEEC-------TTCC---------------CGGG-HHHHHG-GGGGCCSCEECCSC
T ss_pred HH-HHHHHH-c-CCCeEEEec-------CCCC---------------CHHH-HHHHHH-HHhCCCcEEECCCC
Confidence 53 555555 3 578899997 2333 3466 776554 78899999999985
|
| >2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-13 Score=131.68 Aligned_cols=203 Identities=15% Similarity=0.191 Sum_probs=136.4
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++ | + . .++ ++.
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~Ge~~-~---~----------~------~~~--~~~ 61 (384)
T 2pgw_A 4 VKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTVGIGECT-V---A----------P------DQT--GTA 61 (384)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEEE-C---T----------T------CHH--HHH
T ss_pred CEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCCEEEEccC-C---C----------c------hHH--HHH
Confidence 67999998866 35666 478999999999976 66655 1 1 0 022 677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHH-HHhhcCCCCccc---C-CChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEF-MIKLDGTENKSK---F-GANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~-L~~lDgT~nks~---l-GaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
.|++.++|.|+ |.++.++..+++. |. +++.++++ . +.+|+.|+++|++.+.|+..|+|||++|+ |...
T Consensus 62 ~i~~~l~~~l~--g~d~~~~~~~~~~~l~--~~~~~~g~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~ 134 (384)
T 2pgw_A 62 AILYRLAKHLV--GHSPHDVAPLIARIFH--QEYLGHGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLG---GAHR 134 (384)
T ss_dssp HHHHHHHGGGT--TSCGGGHHHHHHHHHH--HHTGGGTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCSS
T ss_pred HHHHHHHHHHC--CCChhHHHHHHHHHHH--HHhhhcccccccccHHHHHHHHHHHHHHHHhHcCCCHHHHcC---CCCC
Confidence 78888999998 7899999999988 74 33334433 2 46899999999999999999999999998 6432
Q ss_pred cccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCCh
Q psy12655 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDN 220 (299)
Q Consensus 143 ~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~ 220 (299)
-++|+.+.++++ +.|+| ..+.++..+ .|... ..+| + +.
T Consensus 135 --~~v~~~~~~~~~-------~~e~~--------------------~~~a~~~~~--~Gf~~iKik~g---~------~~ 174 (384)
T 2pgw_A 135 --KAVGYFYFLQGE-------TAEEL--------------------ARDAAVGHA--QGERVFYLKVG---R------GE 174 (384)
T ss_dssp --SEEEBCEECCCS-------SHHHH--------------------HHHHHHHHH--TTCCEEEEECC---S------CH
T ss_pred --CceEEEEECCCC-------CHHHH--------------------HHHHHHHHH--cCCCEEEECcC---C------CH
Confidence 356666666431 12221 112222222 13111 1222 1 56
Q ss_pred HHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 221 KEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 221 e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+..++.+...-+.+| ++.|.+|+ ++. +|.+|.+++.. .+++|+|.+||+|+.
T Consensus 175 ~~~~e~v~avr~a~g---d~~l~vD~-------n~~---------------~~~~~a~~~~~-~l~~~~i~~iEqP~~ 226 (384)
T 2pgw_A 175 KLDLEITAAVRGEIG---DARLRLDA-------NEG---------------WSVHDAINMCR-KLEKYDIEFIEQPTV 226 (384)
T ss_dssp HHHHHHHHHHHTTST---TCEEEEEC-------TTC---------------CCHHHHHHHHH-HHGGGCCSEEECCSC
T ss_pred HHHHHHHHHHHHHcC---CcEEEEec-------CCC---------------CCHHHHHHHHH-HHHhcCCCEEeCCCC
Confidence 777777755555555 57788885 122 45678888755 788999999999985
|
| >2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.1e-13 Score=130.02 Aligned_cols=207 Identities=16% Similarity=0.173 Sum_probs=132.8
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. ++|-|+|.|++|.. .|-+++ +|. ..|. ...++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~---~g~-----------~~~~---~~~~~~ 65 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEVGLGFIQT---LFN-----------PLPD---QQEIES 65 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEE---SSS-----------CCCC---HHHHHH
T ss_pred CEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCCEEEEEecc---CCC-----------cccc---HHHHHH
Confidence 78999988776 456663 57999999999976 665543 111 1222 245677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcC--CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDG--TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg--T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
.|++.++|.|+ |.++.++ +..+++ +.++++++.+++.|+++|++.+.|+..|+|||++|+ |.. -
T Consensus 66 ~i~~~l~p~l~--G~d~~~~------~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLG---g~~---~ 131 (389)
T 2oz8_A 66 VFEHEVWPSLK--GNRAIAL------VHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLG---SRR---N 131 (389)
T ss_dssp HHHHHTHHHHT--TSCHHHH------TTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTT---CSC---S
T ss_pred HHHHHHHHHHc--CCCHHHH------HHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCC---C
Confidence 78888999998 7888776 455643 667788899999999999999999999999999998 642 3
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
++|+.+. +|.|. . +.++..+ +.++.++ .|. .-..+|+ .+.+..
T Consensus 132 ~vp~y~~--~~~~~---~-------------~~~~~~~-------~a~~~~~--~Gf~~vKik~g~--------~~~~~~ 176 (389)
T 2oz8_A 132 RVKAYAS--GLDFH---L-------------DDDAFVS-------LFSHAAS--IGYSAFKIKVGH--------RDFDRD 176 (389)
T ss_dssp EEEEEEE--CCBTT---C-------------CHHHHHH-------HHHHHHH--TTCCEEEEECCC--------SSHHHH
T ss_pred ceEEEEe--CCCcC---C-------------CHHHHHH-------HHHHHHH--hCCCEEEEccCC--------CCHHHH
Confidence 6677765 34331 1 2222211 2222222 131 0112332 245666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++ |+|.+||+|+.
T Consensus 177 ~e~v~avR~a~G--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~g~~i~~iEqP~~ 228 (389)
T 2oz8_A 177 LRRLELLKTCVP--AGSKVMIDPN-------EA---------------WTSKEALTKLVA-IREAGHDLLWVEDPIL 228 (389)
T ss_dssp HHHHHHHHTTSC--TTCEEEEECT-------TC---------------BCHHHHHHHHHH-HHHTTCCCSEEESCBC
T ss_pred HHHHHHHHHhhC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCceEEeCCCC
Confidence 666654444445 4688889971 22 456888888866 567 99999999985
|
| >1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A | Back alignment and structure |
|---|
Probab=99.52 E-value=5.6e-14 Score=134.33 Aligned_cols=202 Identities=17% Similarity=0.255 Sum_probs=134.5
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .++|-|+|.| +|.. .|-+++. +. ..|.|.++..++.
T Consensus 8 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-dG~~G~GE~~~~-------------~~-~~~~~e~~~~~~~ 72 (375)
T 1r0m_A 8 FKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHG-EGVQGVAEGTME-------------AR-PMYREETIAGALD 72 (375)
T ss_dssp EECCEEEEEEEEEEBC----------CEEEEEEEEEEE-TTEEEEEECCCB-------------SS-SSSSSCBHHHHHH
T ss_pred cEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEE-CCeEEEEEEecC-------------CC-CcccCCCHHHHHH
Confidence 578888887652 3445 5789999999 5865 6655432 01 2588899999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ |. ...+|+
T Consensus 73 ~i~~~l~~~l~--g~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~~~~ 139 (375)
T 1r0m_A 73 LLRGTFLPAIL--GQTFANPEAVSDALGSYRG-------NRMARAMVEMAAWDLWARTLGVPLGTLLG---GH-KEQVEV 139 (375)
T ss_dssp HHHHTHHHHHT--TCEESSHHHHHHTTTTSCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---CC-CSEEEB
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceee
Confidence 99999999998 7899999999988765543 56899999999999999999999999998 64 234666
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc--ccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT--AVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t--~vgdeGgfap~~~~~e~aL~ 225 (299)
+ +++ |.| .+.++.. .+.++.++. |.... .++ | ++.++
T Consensus 140 ~-~~~---g~~-----------------~~~~~~~-------~~a~~~~~~--G~~~iKik~~------~-----~~d~~ 178 (375)
T 1r0m_A 140 G-VSL---GIQ-----------------ADEQATV-------DLVRRHVEQ--GYRRIKLKIK------P-----GWDVQ 178 (375)
T ss_dssp C-EEE---CCC-----------------SSHHHHH-------HHHHHHHHT--TCSCEEEECB------T-----TBSHH
T ss_pred e-EEe---cCC-----------------CCHHHHH-------HHHHHHHHh--cccEEEEecC------h-----HHHHH
Confidence 5 332 322 1222211 222333321 31111 121 2 33445
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+ +||+++ + +++.|.+|+ ++.| |.+| ++++.. +++|+|.+||||+.
T Consensus 179 ~v-~avr~a-~-~~~~l~vDa-------n~~~---------------~~~~-~~~~~~-l~~~~i~~iEqP~~ 224 (375)
T 1r0m_A 179 PV-RATREA-F-PDIRLTVDA-------NSAY---------------TLAD-AGRLRQ-LDEYDLTYIEQPLA 224 (375)
T ss_dssp HH-HHHHHH-C-TTSCEEEEC-------TTCC---------------CGGG-HHHHHT-TGGGCCSCEECCSC
T ss_pred HH-HHHHHH-c-CCCeEEEeC-------CCCC---------------CHHH-HHHHHH-HHhCCCcEEECCCC
Confidence 43 555555 3 688999996 2333 3457 887666 68899999999985
|
| >1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.8e-13 Score=126.99 Aligned_cols=205 Identities=20% Similarity=0.224 Sum_probs=135.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. ++|.|+|.|++|.. .|-+++. | |.++ .+..
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~Ge~~~~---~----------------~~~~-~~~~ 63 (359)
T 1mdl_A 4 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAY---T----------------PVAL-KSLK 63 (359)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS---S----------------GGGH-HHHH
T ss_pred CEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCCEEEEEeecC---C----------------CchH-HHHH
Confidence 78999988766 356664 57899999999876 6655542 1 2234 6677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCccc--CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~--lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
.|++.++|.|+ |.|+.++..+ +.|.+. +.++++ ++.+++.|+++|++.+.|+..|+|||++|+ |. . -
T Consensus 64 ~i~~~l~~~l~--g~d~~~~~~~-~~l~~~--~~~~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llG---g~-~--~ 132 (359)
T 1mdl_A 64 QLLDDMAAMIV--NEPLAPVSLE-AMLAKR--FCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLG---AN-A--R 132 (359)
T ss_dssp HHHHHHHHHHT--TSBSCHHHHH-HHHHHH--TTTTCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CC-C--C
T ss_pred HHHHHHHHHHC--CCCccchHHH-HHHHHH--HHhhccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhC---CC-C--C
Confidence 88888999998 7899999999 777654 334433 346899999999999999999999999998 65 2 2
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~a 223 (299)
++|..+. +|. .+.++.. .+.++..+. |... ..+|. .+++..
T Consensus 133 ~vp~~~~--~g~------------------~~~~~~~-------~~a~~~~~~--Gf~~iKik~g~--------~~~~~~ 175 (359)
T 1mdl_A 133 PVQAYDS--HSL------------------DGVKLAT-------ERAVTAAEL--GFRAVKTRIGY--------PALDQD 175 (359)
T ss_dssp CEEEEEE--CCS------------------CHHHHHH-------HHHHHHHHT--TCSEEEEECCC--------SSHHHH
T ss_pred Ceeeeee--cCC------------------CCHHHHH-------HHHHHHHHc--CCCEEEEecCC--------CCHHHH
Confidence 3455543 231 1122211 122222221 3111 12232 245666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 176 ~e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 225 (359)
T 1mdl_A 176 LAVVRSIRQAVG--DDFGIMVDYN-------QS---------------LDVPAAIKRSQA-LQQEGVTWIEEPTL 225 (359)
T ss_dssp HHHHHHHHHHHC--SSSEEEEECT-------TC---------------SCHHHHHHHHHH-HHHHTCSCEECCSC
T ss_pred HHHHHHHHHHhC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHHhCCCeEECCCC
Confidence 666655445556 3688888861 22 456888888766 67899999999985
|
| >2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A | Back alignment and structure |
|---|
Probab=99.51 E-value=6e-13 Score=127.75 Aligned_cols=202 Identities=17% Similarity=0.219 Sum_probs=135.8
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- .|+| +++|-|+|.|++|.. .|-++ | . -..+..
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~-g--------------~--------~~~~~~ 60 (382)
T 2gdq_A 4 VKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECV-D--------------W--------LPALHV 60 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEEC-S--------------C--------HHHHHH
T ss_pred CEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCCEEEEeec-C--------------c--------hHHHHH
Confidence 789999887663 3455 578999999999875 66554 2 0 013566
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|... +.+++.|+++|++.+.|+..|+|||++|+ |.. .-++
T Consensus 61 ~i~~~l~~~l~--G~d~~~~~~~~~~l~~~---------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~--~~~v 124 (382)
T 2gdq_A 61 GFTKRIIPFLL--GKQAGSRLSLVRTIQKW---------HQRAASAVSMALTEIAAKAADCSVCELWG---GRY--REEI 124 (382)
T ss_dssp HHHHTHHHHHT--TSBTTCHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCS--CSEE
T ss_pred HHHHHHHHHhc--CCCcccHHHHHHHHHHH---------HhHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCC--CCce
Confidence 77888999998 78999999999998654 27899999999999999999999999998 642 2356
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
|+.+.+ |+.| ++.+++ ++.. .+.++..+ .|... ..+|+ .+.++.++
T Consensus 125 p~~~~~-g~~~-~~~~~~-------------e~~~-------~~a~~~~~--~Gf~~vKik~g~--------~~~~~d~e 172 (382)
T 2gdq_A 125 PVYASF-QSYS-DSPQWI-------------SRSV-------SNVEAQLK--KGFEQIKVKIGG--------TSFKEDVR 172 (382)
T ss_dssp EEEEEC-CCBC-SSTTHH-------------HHHH-------HHHHHHHT--TTCCEEEEECSS--------SCHHHHHH
T ss_pred eEEEEe-cccC-CCcccH-------------HHHH-------HHHHHHHH--cCCCEEEEcCCC--------CCHHHHHH
Confidence 667655 4333 232332 1111 12222222 13111 12332 23566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC-CeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY-PIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y-PIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+- +. +|.+|.+++... +++| +|.+||+|+.
T Consensus 173 ~v~avR~a~G--~d~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~~i~~iEqP~~ 221 (382)
T 2gdq_A 173 HINALQHTAG--SSITMILDAN-------QS---------------YDAAAAFKWERY-FSEWTNIGWLEEPLP 221 (382)
T ss_dssp HHHHHHHHHC--TTSEEEEECT-------TC---------------CCHHHHHTTHHH-HTTCSCEEEEECCSC
T ss_pred HHHHHHHhhC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HhhccCCeEEECCCC
Confidence 6655444556 4688889961 22 456888888665 7889 8999999985
|
| >2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} | Back alignment and structure |
|---|
Probab=99.46 E-value=3e-12 Score=122.61 Aligned_cols=205 Identities=18% Similarity=0.166 Sum_probs=136.9
Q ss_pred CceeeEEEeEE---------eCCCCC-----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQI---------FDSRGN-----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~i---------lDsrG~-----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+ -.|+|. ++|.|+|.|++|.. .|-++. + + ..|.|.++..+
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~--~--~~~~~~~~~~~ 67 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTP-----------C--G--ENYMIAHSEGV 67 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBC-----------S--S--TTSSSCCTTHH
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCCEEEEEeec-----------C--C--CCcCCCCHHHH
Confidence 78999998866 234553 67999999999865 444432 1 1 14777778888
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...|+ .++|.|+ |.|+.++..+++.|... . +. +.+++.|+++|++.+.|+..|+|||++|+ |... -
T Consensus 68 ~~~i~-~l~~~l~--g~d~~~~~~~~~~l~~~---~-~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~--~ 133 (379)
T 2rdx_A 68 DAFAR-LAAPQLL--GQDPRQVARMERLMDHL---V-QG--HGYAKAPFDAAFWDILGQATGQPVWMLLG---GKLC--D 133 (379)
T ss_dssp HHHHH-HHHHHHT--TSCTTCHHHHHHHHHHH---S-SS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCCC--S
T ss_pred HHHHH-HHHHHHc--CCChhhHHHHHHHHHHH---h-cc--cHHHHHHHHHHHHHHhHHHhCCCHHHHcC---CCCC--C
Confidence 88888 7999998 78999999999988322 1 11 56899999999999999999999999998 6432 2
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
++|+.+.++.+ +.| +. ..+.++..+. |. .-..+|. +.+..
T Consensus 134 ~v~~~~~~~~~-------~~~-------------~~-------~~~a~~~~~~--Gf~~iKik~g~---------~~~~~ 175 (379)
T 2rdx_A 134 GAPMYRVAPQR-------SEA-------------ET-------RAELARHRAA--GYRQFQIKVGA---------DWQSD 175 (379)
T ss_dssp SEEBCEECCCS-------CSH-------------HH-------HHHHHHHHHT--TCCEEEEECCS---------CHHHH
T ss_pred ceeEEEEecCC-------CHH-------------HH-------HHHHHHHHHc--CCCEEEEeccC---------CHHHH
Confidence 45555554110 111 11 1122222221 31 1112332 45667
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+.+| .++.|.+|+ ++. +|.+|.+++... +++|+| +||+|+.
T Consensus 176 ~e~v~avr~a~g--~d~~l~vDa-------n~~---------------~~~~~a~~~~~~-l~~~~i-~iE~P~~ 224 (379)
T 2rdx_A 176 IDRIRACLPLLE--PGEKAMADA-------NQG---------------WRVDNAIRLARA-TRDLDY-ILEQPCR 224 (379)
T ss_dssp HHHHHHHGGGSC--TTCEEEEEC-------TTC---------------SCHHHHHHHHHH-TTTSCC-EEECCSS
T ss_pred HHHHHHHHHhcC--CCCEEEEEC-------CCC---------------CCHHHHHHHHHH-HHhCCe-EEeCCcC
Confidence 776665544555 468888885 122 456888887655 788999 9999984
|
| >2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=133.34 Aligned_cols=210 Identities=11% Similarity=0.081 Sum_probs=126.8
Q ss_pred CceeeEEEeEEeC--------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHH--HHHHHH
Q psy12655 1 MPISKIHARQIFD--------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT--KAVGFI 69 (299)
Q Consensus 1 ~~I~~v~ar~ilD--------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~--~Av~~i 69 (299)
|+|++|..+.+-- |+ +++|.|+|.|+ |.. .|-+++.. |.+.++. .++..|
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~-~~~~~V~v~td-G~~G~GE~~~~~-----------------~~~~~~~~~~~~~~i 63 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGS-QDALLVRVAAG-GHIGWGECEAAP-----------------LPSIAAFVCPKSHGV 63 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGG-GEEEEEEEEET-TEEEEEEECSCH-----------------HHHHHHHHCCCSBTT
T ss_pred CEEEEEEEEEEeccCCCcccccc-ceEEEEEEEeC-CcEEEEeeeccc-----------------CCcccchhHHHHHHH
Confidence 7899999987741 22 67999999999 976 77766531 1122221 345567
Q ss_pred HHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC----Ch--hhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 70 NNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG----AN--AILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 70 n~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG----aN--ailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
++.++|.|+ |. +.++. +.|.+ ++.++++.| .| ++.|+++|++.+.|+..|+|||++|+ |....
T Consensus 64 ~~~l~~~l~--G~-~~~~~---~~l~~--~~~~~~~~g~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~ 132 (401)
T 2hzg_A 64 CRPVSDSVL--GQ-RLDGP---DDIAR--IAALVGYNSMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLG---YSASH 132 (401)
T ss_dssp BCCGGGGTT--TC-BCSSH---HHHHH--HHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSCCC
T ss_pred HHHHHHHhC--CC-CCCHH---HHHHH--HHHhhccCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCC
Confidence 777999998 67 88875 22322 111222223 68 99999999999999999999999998 64323
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCCh-HH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDN-KE 222 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~-e~ 222 (299)
.+| ..+.++++ -++|+| .+++.++..+-|+.+| -| + +.+| + +. +.
T Consensus 133 ~vp--~~~~~~~~------~~~~~~---------~~~a~~~~~~Gf~~iK----ik-~---spvG---~------~~~~~ 178 (401)
T 2hzg_A 133 GKR--PYASLLFG------DTPQET---------LERARAARRDGFAAVK----FG-W---GPIG---R------GTVAA 178 (401)
T ss_dssp CBE--EEEEEECC------SSHHHH---------HHHHHHHHHTTCSEEE----EE-S---TTTT---S------SCHHH
T ss_pred ceE--eeEEcCCC------CCHHHH---------HHHHHHHHHhCCCeEE----Ec-C---CCCC---C------CHHHH
Confidence 444 45455432 123332 1222221111111111 01 0 1132 2 33 44
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCcc-CHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWL-PADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~-t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.+...-+.+| .++.|.+|+. +.| . |.+|.++++.. +++|+|.+||||+.
T Consensus 179 ~~e~v~avr~a~G--~d~~l~vDan-------~~~--------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 231 (401)
T 2hzg_A 179 DADQIMAAREGLG--PDGDLMVDVG-------QIF--------------GEDVEAAAARLPT-LDAAGVLWLEEPFD 231 (401)
T ss_dssp HHHHHHHHHHHHC--SSSEEEEECT-------TTT--------------TTCHHHHHTTHHH-HHHTTCSEEECCSC
T ss_pred HHHHHHHHHHHhC--CCCeEEEECC-------CCC--------------CCCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 5555554444455 3688889971 222 1 66888888776 67899999999986
|
| >2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.7e-12 Score=123.19 Aligned_cols=212 Identities=18% Similarity=0.159 Sum_probs=133.0
Q ss_pred CceeeEEEeEEeC--------C------CCCeeEEEEEEECC--Cce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQIFD--------S------RGNPTVEVDLTTEL--GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~ilD--------s------rG~pTvevev~~~~--g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|+.+.+== | ....++.|+|.|++ |.. .|-+++ +| +.+.+|.
T Consensus 2 mkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~~G~Ge~~~---~g--------------~~~~~v~ 64 (441)
T 2hxt_A 2 RTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFT---IG--------------RGNDVQT 64 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCEEEEEEEE---CS--------------TTHHHHH
T ss_pred CcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCCEEEEeecC---CC--------------CCcHHHH
Confidence 6899999987721 1 11357999999998 876 666554 11 1123455
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHH----HHHHHHhhcCCCCcc-cCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKE----IDEFMIKLDGTENKS-KFG--ANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~----ID~~L~~lDgT~nks-~lG--aNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
.++ + .++|.|+ |.++.++.. +++.|...+++.++. +.| .+|+.|+++|++.+.|+..|+|||++|+
T Consensus 65 ~~i---~-~l~~~li--G~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG- 137 (441)
T 2hxt_A 65 AAV---A-ALAEHVV--GLSVDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIA- 137 (441)
T ss_dssp HHH---H-TTHHHHT--TCBHHHHHHCHHHHHHHHHTCHHHHHTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHH-
T ss_pred HHH---H-HHHHHHc--CCChHHHHhhHHHHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc-
Confidence 444 4 5899998 789998864 777776544333222 123 4899999999999999999999999998
Q ss_pred hhCCCcc---------------------------------------ccccceEEeecCCcCCCCcccceeEEEEecCCCC
Q psy12655 137 LAGNSNI---------------------------------------ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASS 177 (299)
Q Consensus 137 l~g~~~~---------------------------------------~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s 177 (299)
|.... .-|+|+.++.+|+.. . +
T Consensus 138 --G~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~~----~-------------~ 198 (441)
T 2hxt_A 138 --ELTPEQLVDTIDFRYLSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWLG----Y-------------S 198 (441)
T ss_dssp --TSCHHHHHHHCCCTTCTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECTT----S-------------C
T ss_pred --CCCcccccccccccccccccchhhhhhhhhcccccchhhhhhcccCCcceeEecccccC----C-------------C
Confidence 54311 127888888766531 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCC
Q psy12655 178 FSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEG 255 (299)
Q Consensus 178 ~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g 255 (299)
.++.. .+.++..+ .|... ..+|. +.++.++.+...-+..| +++.|.+|+ ++
T Consensus 199 ~e~~~-------~~a~~~~~--~Gf~~vKik~g~---------~~~~d~e~v~avR~a~G--~d~~l~vDa-------n~ 251 (441)
T 2hxt_A 199 DEKLV-------RLAKEAVA--DGFRTIKLKVGA---------NVQDDIRRCRLARAAIG--PDIAMAVDA-------NQ 251 (441)
T ss_dssp HHHHH-------HHHHHHHH--TTCSEEEEECCS---------CHHHHHHHHHHHHHHHC--SSSEEEEEC-------TT
T ss_pred HHHHH-------HHHHHHHH--cCCCEEEEccCC---------CHHHHHHHHHHHHHhcC--CCCeEEEEC-------CC
Confidence 22211 12222222 13111 12231 34555665543333345 468888996 12
Q ss_pred ceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 256 QYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 256 ~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 252 ~---------------~~~~~a~~~~~~-l~~~~i~~iEqP~~ 278 (441)
T 2hxt_A 252 R---------------WDVGPAIDWMRQ-LAEFDIAWIEEPTS 278 (441)
T ss_dssp C---------------CCHHHHHHHHHT-TGGGCCSCEECCSC
T ss_pred C---------------CCHHHHHHHHHH-HHhcCCCeeeCCCC
Confidence 2 456888888776 67899999999986
|
| >4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1e-08 Score=97.91 Aligned_cols=209 Identities=14% Similarity=0.193 Sum_probs=129.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+|. +.|=|+|+|++|.. .|-+... .....
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~~G~GE~~~~------------------------~~~~~ 56 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTVGWGECLGP------------------------ARPNA 56 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECSC------------------------HHHHH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCCEEEEEecCC------------------------cchHH
Confidence 89999998765 245663 56789999999875 4433210 11233
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+.+.++|.|+ |.|+.+...|.+.|....-......+...|+.|+-+|++-+.|+..|+|||+.|+ |.....+|+
T Consensus 57 ~~~~~~~~~li--G~d~~~~e~~~~~l~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG---g~~~~~~~~ 131 (378)
T 4hpn_A 57 AVVQAYSGWLI--GQDPRQTEKIWAVLYNALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLG---GRWRESVRA 131 (378)
T ss_dssp HHHHHHHTTTT--TSCTTCHHHHHHHHHHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEE
T ss_pred HHHHHHHHHHc--CCChHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHhhhhccCccccccC---CccccCcce
Confidence 45677999998 7899999888887765432222222233588999999999999999999999998 765444544
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
... |+... ....+..+..+ ++.+...+ |. .-..+| .+.++-++
T Consensus 132 --y~~--~~~~~-------------~~~~~~~~~~~-------~~~~~~~~--Gf~~~K~k~g---------~~~~~di~ 176 (378)
T 4hpn_A 132 --YAT--GSFKR-------------DNVDRVSDNAS-------EMAERRAE--GFHACKIKIG---------FGVEEDLR 176 (378)
T ss_dssp --EEE--CCCBC-------------TTCCHHHHHHH-------HHHHHHHT--TCSEEEEECC---------SCHHHHHH
T ss_pred --eee--ecccc-------------ccchhHHHHHH-------HHHHHHHh--ccceeccccc---------CChHHHHH
Confidence 222 22111 11222333322 22333322 31 111222 13566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| +++.|.+|+- ..+|.+|-+.+.. .+++|.|.+||+|+.
T Consensus 177 ~v~avr~~~g--~~~~l~vDaN----------------------~~~~~~~A~~~~~-~l~~~~i~~iEeP~~ 224 (378)
T 4hpn_A 177 VIAAVREAIG--PDMRLMIDAN----------------------HGYTVTEAITLGD-RAAGFGIDWFEEPVV 224 (378)
T ss_dssp HHHHHHHHHT--TTSEEEEECT----------------------TCCCHHHHHHHHH-HHGGGCCSCEECCSC
T ss_pred HHHHHHHhcC--CcEEEEEecC----------------------cccCHHHHHHHHh-hhhhcccchhhcCCC
Confidence 6665555555 4688999961 1246677776554 457899999999985
|
| >3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A | Back alignment and structure |
|---|
Probab=98.96 E-value=6.7e-08 Score=94.49 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=133.2
Q ss_pred CceeeEEEeEEeC----CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH
Q psy12655 1 MPISKIHARQIFD----SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75 (299)
Q Consensus 1 ~~I~~v~ar~ilD----srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p 75 (299)
|+|++|..+.+=- ..++..|=|+|.|++|.. -|-+... .+ .. ......|++.++|
T Consensus 2 MkIt~i~~~~~~~p~~~~~~~~~v~V~v~Td~G~~G~GE~~~~--~~---------------~~---~~v~~~i~~~l~p 61 (433)
T 3rcy_A 2 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAA--SV---------------GP---EAMRAVIEDVFAR 61 (433)
T ss_dssp CCEEEEEEEEECCCTTCTTCSCEEEEEEEETTSCEEEEEECCC--SS---------------CH---HHHHHHHHHHHHH
T ss_pred CeEEEEEEEEEcCCCCccCCceEEEEEEEECCCCEEEEeccCC--CC---------------CH---HHHHHHHHHHHHH
Confidence 8999999997622 125678999999999976 5553321 01 11 2233446777999
Q ss_pred HHhcCCCCccchHHHHHHHHhhcCCCCccc-CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee-
Q psy12655 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSK-FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI- 153 (299)
Q Consensus 76 ~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~-lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi- 153 (299)
.|+ |.|+.+...+-+.|....- ..... +...|+.|+-+|+.=..++..|+|||+.|+ |.....+ |....+
T Consensus 62 ~Li--G~dp~~ie~~~~~l~~~~~-~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLG---G~~r~~v--~~y~~~~ 133 (433)
T 3rcy_A 62 HME--GENPENIELMFRRVYSSGF-TQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLG---GKMNPRI--RAYTYLY 133 (433)
T ss_dssp HTT--TSCTTCHHHHHHHHHHTTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSSE--EEEEECC
T ss_pred HhC--CCCcccHHHHHHHHHhccc-ccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeE--EEEEEEc
Confidence 999 7899998877777754210 00000 113489999999999999999999999999 7543344 445443
Q ss_pred --cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCC----CCCcCCCCCChHHHHH
Q psy12655 154 --NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGD----EGGFAPNILDNKEGLR 225 (299)
Q Consensus 154 --nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgd----eGgfap~~~~~e~aL~ 225 (299)
+|. ++ +....+.++..+ +.++.++. |. +-..+|. ..|..|...+.++.++
T Consensus 134 ~~~g~-------~~------~~~~~~~e~~~~-------~a~~~~~~--Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e 191 (433)
T 3rcy_A 134 PLPHH-------PI------TPFWTSADMAAE-------SAADCVAR--GYTAVKFDPAGPYTLRGGHMPAMTDISLSVE 191 (433)
T ss_dssp CCTTS-------CH------HHHTTCHHHHHH-------HHHHHHHT--TCSEEEECCSCCCBTTCCBCCCHHHHHHHHH
T ss_pred ccCCc-------cc------ccCCCCHHHHHH-------HHHHHHHc--CCCEEEEcCCCCcccccCCCcchhhHHHHHH
Confidence 221 00 011134433333 22333332 31 1112232 2344454445566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+- + .+|.+|-+.+.+ .+++|.+.+||+|+.
T Consensus 192 ~v~avR~avG--~d~~L~vDan-------~---------------~~t~~~A~~~~~-~Le~~~i~~iEeP~~ 239 (433)
T 3rcy_A 192 FCRKIRAAVG--DKADLLFGTH-------G---------------QFTTAGAIRLGQ-AIEPYSPLWYEEPVP 239 (433)
T ss_dssp HHHHHHHHHT--TSSEEEECCC-------S---------------CBCHHHHHHHHH-HHGGGCCSEEECCSC
T ss_pred HHHHHHHHhC--CCCeEEEeCC-------C---------------CCCHHHHHHHHH-HhhhcCCCEEECCCC
Confidence 6655444555 4688888851 1 245667666554 557899999999985
|
| >3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-08 Score=94.41 Aligned_cols=200 Identities=19% Similarity=0.262 Sum_probs=126.6
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -.|+| .+++-|+|.|++|.. .|-+ |.. .|.|.+...+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-----------------~~~ge~~~~~~ 63 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPGI-----------------FITGETLAGTL 63 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCT-----------------TTTCCCHHHHH
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCCEEEEeecCCC-----------------CcCCCCHHHHH
Confidence 88999987765 23555 357889999999875 5533 321 23444555666
Q ss_pred HHHHHhHH---HHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 67 GFINNDIA---PALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 67 ~~in~~i~---p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
..++ .++ |.|+ |.++.+...+.+.|. . ....|+.|+.+|+.-+.++..|+|||+.|+ |. ..
T Consensus 64 ~~i~-~l~~~~p~l~--G~d~~~~~~~~~~l~----~-----~~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~ 127 (354)
T 3jva_A 64 ETIE-LFGQAIIGLN--PFNIEKIHEVMDKIS----A-----FAPAAKAAIDIACYDLMGQKAQLPLYQLLG---GY-DN 127 (354)
T ss_dssp HHHH-HHHTTSTTCC--TTCHHHHHHHHHHHC----S-----SCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CS-CS
T ss_pred HHHH-HHhhcCcccc--CCCcccHHHHHHHHh----c-----ccHHHHHHHHHHHHHHHHHHcCCcHHHHhh---cc-CC
Confidence 6677 688 9998 788888777766664 1 123688999999999999999999999998 63 33
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+- .. + +..+.++..+ +.++.+.. |. +-..+|. +.+
T Consensus 128 ~v~~~--~~------------------~--~~~~~~~~~~-------~a~~~~~~--G~~~~K~K~g~---------~~~ 167 (354)
T 3jva_A 128 QVITD--IT------------------L--GIDEPNVMAQ-------KAVEKVKL--GFDTLKIKVGT---------GIE 167 (354)
T ss_dssp EEECC--EE------------------E--CSCCHHHHHH-------HHHHHHHT--TCSEEEEECCS---------CHH
T ss_pred eeeee--EE------------------e--CCCCHHHHHH-------HHHHHHHh--CCCeEEEEeCC---------CHH
Confidence 44431 00 1 1223433322 23333332 31 1123332 235
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...-+..| +++.|.+|+ ++ .+|.+|.+++...| ++|+|.+||+|+.
T Consensus 168 ~d~~~v~avR~a~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~~~L-~~~~i~~iEqP~~ 219 (354)
T 3jva_A 168 ADIARVKAIREAVG--FDIKLRLDA-------NQ---------------AWTPKDAVKAIQAL-ADYQIELVEQPVK 219 (354)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEC-------TT---------------CSCHHHHHHHHHHT-TTSCEEEEECCSC
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEC-------CC---------------CCCHHHHHHHHHHH-HhcCCCEEECCCC
Confidence 66666655444455 468888885 11 24567777776654 7799999999985
|
| >2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=6e-08 Score=92.18 Aligned_cols=210 Identities=18% Similarity=0.176 Sum_probs=129.7
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|..+.+ -.|+|. ..|-|+|.|+ |.. |--|+..+.. ..|.+.....+...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~td-G~~----------G~GE~~~~~~---p~~~~e~~~~~~~~ 66 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSE-GLV----------GVGEGGSVGG---PVWSAECAETIKII 66 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBT-TBC----------CEEECCCSTT---TTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEEC-CcE----------EEEEecCCCC---CccCcccHHHHHHH
Confidence 89999998865 245554 4567777764 653 3333322211 13667777777888
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccc
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVP 148 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P 148 (299)
|++.++|.|+ |.|+.+...+-+.|...- .-...|+.|+-+|++-+.++..|+|||+.|+ |.....+|+
T Consensus 67 i~~~l~p~li--G~d~~~~~~~~~~~~~~~------~~~~~A~said~AlwDl~gK~~g~Pl~~lLG---g~~~~~~~~- 134 (370)
T 2chr_A 67 VERYLAPHLL--GTDAFNVSGALQTMARAV------TGNASAKAAVEMALLDLKARALGVSIAELLG---GPLRSAIPI- 134 (370)
T ss_dssp HHHHTHHHHT--TSCTTCHHHHHHHHHTTC------SSCHHHHHHHHHHHHHHHHHHTTCCHHHHTT---CCSCSEEEB-
T ss_pred HHHHHHHHhc--CCCcccHHHHHHHHhhcc------cccHHHHHHHHHHHHHHHHHhcCCccccccC---Cccccccce-
Confidence 8889999999 788988777666654321 1224688999999999999999999999998 654333333
Q ss_pred eEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHH
Q psy12655 149 AFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 149 ~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~l 226 (299)
...+.+| ...+.+... .+.+. +.|. +-..+| ..++++-++.
T Consensus 135 -~~~~~~~--------------------~~~~~~~~~-------~~~~~-~~g~~~~K~Kvg--------~~~~~~d~~~ 177 (370)
T 2chr_A 135 -AWTLASG--------------------DTKRDLDSA-------VEMIE-RRRHNRFKVKLG--------FRSPQDDLIH 177 (370)
T ss_dssp -EEEECSS--------------------CHHHHHHHH-------HHHHH-TTSCCEEEEECS--------SSCHHHHHHH
T ss_pred -eeeeccC--------------------chhhhHHHH-------HHHHh-hcccceeecccc--------cCChHHHHHH
Confidence 2222111 111222211 11122 1121 111222 2456777777
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| +++.|.+|+- + .+|.++-+.+. +.+++|.|.+||+|+.
T Consensus 178 v~avr~~~g--~~~~l~vDaN-------~---------------~~~~~~A~~~~-~~l~~~~~~~iEeP~~ 224 (370)
T 2chr_A 178 MEALSNSLG--SKAYLRVDVN-------Q---------------AWDEQVASVYI-PELEALGVELIEQPVG 224 (370)
T ss_dssp HHHHHHHTT--TTSEEEEECT-------T---------------CCCTHHHHHHH-HHHHTTTCCEEECCSC
T ss_pred HHHHHHhcC--CCcEEEecCC-------C---------------CCCHHHHHHHH-HHHHhcCCceecCCCC
Confidence 766666666 5688999961 1 24556666554 4457899999999985
|
| >4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1e-07 Score=91.12 Aligned_cols=204 Identities=18% Similarity=0.160 Sum_probs=124.0
Q ss_pred CceeeEEEeEEe----C-----CCC----CeeEEEEEEECCCce-EE-EeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF----D-----SRG----NPTVEVDLTTELGLF-RA-AVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il----D-----srG----~pTvevev~~~~g~~-ra-~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|..+.+- + |+| ..+|=|+|+|++|.. -| ++|.+...+ . ....+
T Consensus 10 MKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~~G~GE~~~~~~~~~----------------~-~~~~~ 72 (376)
T 4h2h_A 10 LKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTIGWGETCPVGPTYA----------------E-AHAGG 72 (376)
T ss_dssp CBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSCEEEEEECCSSSSSS----------------S-CCHHH
T ss_pred eEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCCEEEEeecCCCCCcc----------------h-hhHHH
Confidence 899999998762 2 444 356889999999976 44 344432222 1 12233
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
+..+.+.+.|.|+ |.++.+.....++...+.| ...|+.|+-+|+.-+.++..|+|||+.|+ |.....+
T Consensus 73 ~~~~~~~l~~~l~--g~d~~~~~~~~~~~~~~~~-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~v 140 (376)
T 4h2h_A 73 ALAALEVLASGLA--GAEALPLPLHTRMDSLLCG-------HNYAKSALDIAVHDLWGKRLGVPVHELLG---GALTDSV 140 (376)
T ss_dssp HHHHHHHHHHTTT--TCBSSHHHHHHHHHHHCSC-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEE
T ss_pred HHHHHHHHHHHhc--CCccCcHHHHHHHHHhhcc-------cHHHHHHHHHhhhHHHHHhcCCCceecCC---CCcCCce
Confidence 4444567899998 7888876544444333332 23588999999999999999999999998 7544445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~a 223 (299)
|+- ..+ +..+..+..+.+ ++.+++ |... ..+|. .+.++-
T Consensus 141 ~~y--~s~--------------------~~~~~~~~~~~a-------~~~~~~--G~~~~KiKvg~--------~~~~~d 181 (376)
T 4h2h_A 141 SSY--YSL--------------------GVMEPDEAARQA-------LEKQRE--GYSRLQVKLGA--------RPIEID 181 (376)
T ss_dssp ECE--EEE--------------------CSCCHHHHHHHH-------HHHHHH--TCSEEEEECCS--------SCHHHH
T ss_pred eEe--eec--------------------ccCCHHHHHHHH-------HHHHhc--CceEEEEecCC--------CCHHHH
Confidence 542 211 223344443332 222221 3211 12221 234556
Q ss_pred HHHHHHHHHHc-ccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKA-GYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~a-g~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+....+.. | +++.|.+|+ + ..+|.+|-+.+... +.+|++ +||+|++
T Consensus 182 i~~v~~vr~a~~g--~~~~l~vDa-------N---------------~~~~~~~A~~~~~~-l~~~~~-~iEeP~~ 231 (376)
T 4h2h_A 182 IEAIRKVWEAVRG--TGIALAADG-------N---------------RGWTTRDALRFSRE-CPDIPF-VMEQPCN 231 (376)
T ss_dssp HHHHHHHHHHHTT--SCCEEEEEC-------T---------------TCCCHHHHHHHHHH-CTTSCE-EEESCSS
T ss_pred HHHHHHHHhhccC--CeeEEEEee-------c---------------cCCCHHHHHHHHHH-Hhhccc-cccCCcc
Confidence 66666555544 4 468899996 1 12456777766554 478887 8999984
|
| >3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-07 Score=90.25 Aligned_cols=110 Identities=23% Similarity=0.227 Sum_probs=82.7
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+- .|+| .+++=|+|.|++|.. .|-++.. ..|.|.+...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~----------------~~~~~e~~~~~~~ 64 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPPR----------------PFTYGETQTGIVA 64 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEECCC----------------TTTTCCCHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCCEEEEeccCC----------------CCccCCCHHHHHH
Confidence 899999987662 3444 367889999999875 4443221 1345666777788
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.|++.+.|.|+ |.++.+...+-+.|... .....|+.|+.+|+.-+.|+..|+|||+.|+
T Consensus 65 ~i~~~l~~~l~--G~d~~~~~~~~~~l~~~-------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG 123 (367)
T 3dg3_A 65 VIEQYFAPALI--GLTLTEREVAHTRMART-------VGNPTAKAAIDMAMWDALGQSLRLSVSEMLG 123 (367)
T ss_dssp HHHHTHHHHHT--TCBTTCHHHHHHHHTTS-------CSCHHHHHHHHHHHHHHHHHHHTCBHHHHHT
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHhc-------cCchHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 88888999998 78999888777777544 1235789999999999999999999999998
|
| >4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A | Back alignment and structure |
|---|
Probab=98.89 E-value=4.9e-08 Score=93.88 Aligned_cols=210 Identities=23% Similarity=0.285 Sum_probs=126.9
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- .|+| ..+|=|+|+|++|.. .|-+.. .+.+...+..
T Consensus 20 MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~~G~Ge~~~--------------------~~~~~~~~~~ 79 (388)
T 4h83_A 20 LTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGD--------------------EHETMFDIDR 79 (388)
T ss_dssp CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSCEEEEEECC--------------------CCTTHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCCEEEEEecC--------------------CcccHHHHHH
Confidence 789999987662 3444 356889999999975 333211 1223455666
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.|++.++|.|+ |.|+.+...|-+.|....- ......++..|+.|+-+|++-+.++..|+|||+.|+ |.. ..+|
T Consensus 80 ~i~~~lap~Li--G~dp~~ie~l~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---g~~-~~~~ 153 (388)
T 4h83_A 80 IIHEELAPTLI--GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWG---GYR-NELP 153 (388)
T ss_dssp HHHHTTHHHHT--TSBTTCHHHHHHHHGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEE
T ss_pred HHHHHHHHHHc--CCChhHHHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcC---CCc-CceE
Confidence 77889999999 7899998888777755421 111112334688999999999999999999999998 643 2344
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL 224 (299)
+-.. ++.+. .....+.+.++ +..+. |... ..+ || .+.++-+
T Consensus 154 ~y~~----~~~~~-------------~~~~~~~~~~~----------~~~~~--G~~~~Kikv---g~-----~~~~~d~ 196 (388)
T 4h83_A 154 MIAI----GGYYG-------------EPLGSIADEMH----------NYQEL--GLAGVKFKV---GG-----LSAAEDA 196 (388)
T ss_dssp EEEE----ECCTT-------------CTTCSHHHHHH----------HHHHH--TBSEEEEEC---SS-----SCHHHHH
T ss_pred EEee----ccccC-------------CCHHHHHHHHH----------HHHHc--CCceEeecC---CC-----CCHHHHH
Confidence 3221 22111 11122333222 22221 3111 112 12 2445556
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| +++.|.+|+- ..+|.++-+++... +++|.|.+||+|+.
T Consensus 197 ~~v~avR~~~G--~~~~l~vDaN----------------------~~~~~~~A~~~~~~-l~~~~~~~iEeP~~ 245 (388)
T 4h83_A 197 ARITAAREAAG--DDFIICIDAN----------------------QGYKPAVAVDLSRR-IADLNIRWFEEPVE 245 (388)
T ss_dssp HHHHHHHHHHC--SSSEEEEECT----------------------TCBCHHHHHHHHHH-TTTSCCCCEESCBC
T ss_pred HHHHHHHHhcC--CCeEEEEecC----------------------cCCCHHHHHHHHHH-hhhcCcceeecCcc
Confidence 66655555555 5788999961 12456776666554 47899999999984
|
| >4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.8e-07 Score=87.99 Aligned_cols=215 Identities=19% Similarity=0.214 Sum_probs=130.4
Q ss_pred CceeeEEEeEEeCC-----CCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHH
Q psy12655 1 MPISKIHARQIFDS-----RGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIA 74 (299)
Q Consensus 1 ~~I~~v~ar~ilDs-----rG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~ 74 (299)
|+|++|..+.+=-. . .+.+=|+|.|++|.. -|-+. .+.++..++..+-+.++
T Consensus 3 MkI~~i~~~~~~~p~~~~~~-~~~~~V~v~td~G~~G~GE~~---------------------~~~~~~~~~~~~~~~l~ 60 (393)
T 4dwd_A 3 LKIAKVEALSVAMGDGTGWM-PTSAFVRITAEDGTVGWGEAS---------------------PMLGGIASLGVVARDIA 60 (393)
T ss_dssp CBEEEEEEEEEECCC------CEEEEEEEEETTSCEEEEEEC---------------------CGGGGHHHHHHHHHHTH
T ss_pred CEEEEEEEEEEcCCCccccc-ceEEEEEEEECCCCEEEEEcc---------------------CcHHHHHHHHHHHHHHH
Confidence 78999999987422 1 468999999999874 44332 12234444344334499
Q ss_pred HHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 75 PALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 75 p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
|.|+ |.|+.+...+-+.|... .+..+. -+...|+.|+-+|+.-..++..|+|||+.|+ |.... .+|...-+
T Consensus 61 p~li--G~d~~~~e~~~~~l~~~~~~~g~~-g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~--~v~~y~s~ 132 (393)
T 4dwd_A 61 PFLE--GQEVLDHAVLLDRMMHRLVKLGPE-GIATAALAACDIALWDLKGKLLGQPIYKLLG---GAWRT--RLPCYSSI 132 (393)
T ss_dssp HHHT--TSBGGGHHHHHHHHHHHTGGGCCT-THHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS--EEEEEEEE
T ss_pred HHHC--CCCcccHHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCC--ceeeEEec
Confidence 9999 78999888877776543 221111 1223789999999999999999999999998 65333 34444444
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHH-HHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHL-KKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEA 230 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l-~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eA 230 (299)
+|+. ..+.++..+ ++ ++.+++ |. +-..+|....+ ...++++.++.+...
T Consensus 133 ~g~~-----------------~~~~e~~~~-------~a~~~~~~~--G~~~~KlKvG~~~~~--~~~~~~~d~~~v~av 184 (393)
T 4dwd_A 133 GGNA-----------------ARSVDEVVR-------EVARRVEAE--QPAAVKIRWDGDRTR--CDVDIPGDIAKARAV 184 (393)
T ss_dssp CCCS-----------------SSCHHHHHH-------HHHHHHHHH--CCSEEEEECCCCTTC--CSCCHHHHHHHHHHH
T ss_pred CccC-----------------CCCHHHHHH-------HHHHHHHHc--CCCEEEEccCCCCcc--cccCHHHHHHHHHHH
Confidence 3221 122333222 22 222322 31 11123322222 234677888877654
Q ss_pred HHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 231 IEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 231 i~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
-+..| .++.|.+|+ ++ .+|.+|-+.+.. .+++|+|.+||+|+.
T Consensus 185 R~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~~~-~L~~~~i~~iEqP~~ 227 (393)
T 4dwd_A 185 RELLG--PDAVIGFDA-------NN---------------GYSVGGAIRVGR-ALEDLGYSWFEEPVQ 227 (393)
T ss_dssp HHHHC--TTCCEEEEC-------TT---------------CCCHHHHHHHHH-HHHHTTCSEEECCSC
T ss_pred HHHhC--CCCeEEEEC-------CC---------------CCCHHHHHHHHH-HHHhhCCCEEECCCC
Confidence 44446 467888885 11 245567666554 557899999999985
|
| >3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.86 E-value=2.7e-07 Score=88.55 Aligned_cols=209 Identities=19% Similarity=0.229 Sum_probs=134.0
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -.|+| ...+=|+|.|++|.. .|-+ |.| . ..|.|.+...+.
T Consensus 6 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~-~~~~~e~~~~~~ 70 (383)
T 3i4k_A 6 LTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPG--------------G-PWWGGESVETMK 70 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCSS--------------S-TTTTSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCCEEEEecccCC--------------C-CccCCCCHHHHH
Confidence 68999988765 34555 356889999999875 4433 221 0 146666778888
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|++.++|.|+ |.|+.+...+-+.|...-- -...|+.|+.+|+.-..++..|+|||+.|+ |.....+|
T Consensus 71 ~~i~~~l~p~l~--G~d~~~~~~~~~~l~~~~~------~~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~ 139 (383)
T 3i4k_A 71 ALVDGYLAPVLI--GRAVSELAGIMADLERVVA------RARYAKAAVDVAMHDAWARSLNVPVRDLLG---GTVRDKVD 139 (383)
T ss_dssp HHHHHTTHHHHT--TSBGGGHHHHHHHHHHHCC------SCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCSCSEEE
T ss_pred HHHHhhhhHHHc--CCCccCHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCeEE
Confidence 888888999999 7899988887777754311 124689999999999999999999999998 65434455
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
+ ...+. ..+..+.++ +.++.+.+ .|. +-..+|. .++++-+
T Consensus 140 ~--~~t~~--------------------~~~~~~~~~-------~a~~~~~~-~G~~~~K~Kvg~--------~~~~~d~ 181 (383)
T 3i4k_A 140 V--TWALG--------------------VLPLDVAVA-------EIEERIEE-FGNRSFKLKMGA--------GDPAEDT 181 (383)
T ss_dssp B--CEEEC--------------------SCCHHHHHH-------HHHHHHHH-HCCSEEEEECCS--------SCHHHHH
T ss_pred E--eEEee--------------------CCCHHHHHH-------HHHHHHHh-cCCcEEEEeeCC--------CCHHHHH
Confidence 4 21111 123333332 22233332 131 1112331 2567777
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++ .+|.+|-+++ .+.+++|+|.+||+|+.
T Consensus 182 ~~v~avR~a~g--~~~~l~vDa-------n~---------------~~~~~~A~~~-~~~l~~~~i~~iEqP~~ 230 (383)
T 3i4k_A 182 RRVAELAREVG--DRVSLRIDI-------NA---------------RWDRRTALHY-LPILAEAGVELFEQPTP 230 (383)
T ss_dssp HHHHHHHHTTT--TTSEEEEEC-------TT---------------CSCHHHHHHH-HHHHHHTTCCEEESCSC
T ss_pred HHHHHHHHHcC--CCCEEEEEC-------CC---------------CCCHHHHHHH-HHHHHhcCCCEEECCCC
Confidence 77655444445 468888885 12 2455666554 45667899999999985
|
| >3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.9e-07 Score=88.28 Aligned_cols=208 Identities=18% Similarity=0.167 Sum_probs=130.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|..+.+= .|+| ...+=|+|.|++|.. .|-+ |.+ . ..|++.+...+.
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~~G~GE~~~~~------------~---~~y~~e~~~~~~ 69 (381)
T 3fcp_A 5 ATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGICGIGEATTIG------------G---LSYGVESPEAIS 69 (381)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEEECST------------T---TTSSSCCHHHHH
T ss_pred cEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCCEEEeccccCC------------C---CccCCCCHHHHH
Confidence 689999988762 3444 356889999999875 4432 221 0 136666677778
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
..|++.+.|.|+ |.++.+...+-+.|... .| ...|+.|+.+|+.-..++..|+|||+.|+ |.....+
T Consensus 70 ~~i~~~l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v 137 (381)
T 3fcp_A 70 SAITHYLTPLLK--GQPADNLNALTARMNGAIKG-------NTFAKSAIETALLDAQGKALGLPVSALLG---GALQTAL 137 (381)
T ss_dssp HHHHHTHHHHHT--TSBSSCHHHHHHHHHHHCCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEE
T ss_pred HHHHHHHHHHhc--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCce
Confidence 888888999999 78999988887777543 22 24688999999999999999999999998 6543445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
|+- ..+..| +..+.++ +.++.+.+ .|. +-..+|. .++++-
T Consensus 138 ~~~--~t~~~~--------------------~~~~~~~-------~~~~~~~~-~G~~~~KiKvg~--------~~~~~d 179 (381)
T 3fcp_A 138 PVL--WTLASG--------------------DTAKDIA-------EGEKLLAE-GRHRAFKLKIGA--------RELATD 179 (381)
T ss_dssp EBC--EEECSS--------------------CHHHHHH-------HHHHHTC-----CEEEEECCS--------SCHHHH
T ss_pred eeE--EEecCC--------------------ChHHHHH-------HHHHHHHh-CCCCEEEEecCC--------CChHHH
Confidence 542 111111 2222222 22233321 121 1112321 245677
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+ ++ .+|.++-+.+. +.+++|+|.+||+|+.
T Consensus 180 ~~~v~avR~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~~-~~l~~~~i~~iEeP~~ 229 (381)
T 3fcp_A 180 LRHTRAIVEALG--DRASIRVDV-------NQ---------------AWDAATGAKGC-RELAAMGVDLIEQPVS 229 (381)
T ss_dssp HHHHHHHHHHTC--TTCEEEEEC-------TT---------------CBCHHHHHHHH-HHHHHTTCSEEECCBC
T ss_pred HHHHHHHHHHcC--CCCeEEEEC-------CC---------------CCCHHHHHHHH-HHHhhcCccceeCCCC
Confidence 777665555556 468888996 11 24556655554 4557799999999985
|
| >4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.4e-07 Score=89.89 Aligned_cols=224 Identities=13% Similarity=0.110 Sum_probs=132.0
Q ss_pred CceeeEEEeEEeC----CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH
Q psy12655 1 MPISKIHARQIFD----SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75 (299)
Q Consensus 1 ~~I~~v~ar~ilD----srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p 75 (299)
|+|++|+.+.+=- -.+...+=|+|+|++|.. -|-+++. . +.+ ......+++.++|
T Consensus 1 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~-~----------------~~~---~~~~~~i~~~l~p 60 (412)
T 4e4u_A 1 MKIVSLETHIVAVPPPHVGGMYWIFVKLKTDDGIEGVGEIYSA-T----------------FGP---KAMAPIIDDVFER 60 (412)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCC-S----------------SCH---HHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEccCCCccCCCceEEEEEEECCCCEEEEeecCC-C----------------CCH---HHHHHHHHHHhHH
Confidence 8999999998732 124678999999999975 5554321 0 111 2233446667899
Q ss_pred HHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 76 ~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
.|+ |.|+.+...+-+.|... +-....-| ..|+.|+-+|+.-..|+..|+|||+.|+ |.....+|+ ..-+
T Consensus 61 ~Li--G~dp~~~e~~~~~l~~~--~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--yas~ 131 (412)
T 4e4u_A 61 HLL--NRDPHHVERLFRQAYSS--GFTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLG---GRIHERLRS--YTYL 131 (412)
T ss_dssp HTT--TSCTTCHHHHHHHHHHT--TTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEE--EEEC
T ss_pred HhC--CCChhHHHHHHHHHHHh--hhhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeEE--EEec
Confidence 999 78999988877777432 11100111 3588999999999999999999999999 754344543 3322
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccC-C---CCCcCCCCCChHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVG-D---EGGFAPNILDNKEGLRLI 227 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vg-d---eGgfap~~~~~e~aL~ll 227 (299)
..+. .+. .....+.++..+.+ ++.++. |. +-..+| + .+|..+...+.++.++.+
T Consensus 132 ~~~~-~~~----------~~~~~~~e~~~~~a-------~~~~~~--G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v 191 (412)
T 4e4u_A 132 YPKN-AKG----------EYDYDDPDLAAECA-------AENVKL--GFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFC 191 (412)
T ss_dssp CCBC-TTS----------CBCSSCHHHHHHHH-------HHHHHH--TCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHH
T ss_pred cCCc-ccc----------cccCCCHHHHHHHH-------HHHHHc--CCCEEEECCCCCCccccccccchhhHHHHHHHH
Confidence 2111 000 01123444443322 222222 21 011122 1 123334333456667766
Q ss_pred HHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 228 VEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 228 ~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
...-+..| .++.|.+|+- + .+|.+|-+.+ .+.+++|.|.+||+|+.
T Consensus 192 ~avR~a~G--~d~~l~vDaN-------~---------------~~~~~~A~~~-~~~L~~~~i~~iEeP~~ 237 (412)
T 4e4u_A 192 RRVREAVG--SKADLLFGTH-------G---------------QMVPSSAIRL-AKRLEKYDPLWFEEPVP 237 (412)
T ss_dssp HHHHHHHT--TSSEEEECCC-------S---------------CBCHHHHHHH-HHHHGGGCCSEEECCSC
T ss_pred HHHHHHhC--CCCeEEEECC-------C---------------CCCHHHHHHH-HHHhhhcCCcEEECCCC
Confidence 55444555 4678888851 1 2456676655 45567899999999985
|
| >4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-07 Score=92.16 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=80.2
Q ss_pred ceeeEEEeEEeCCCCCee-------------------------------EEEEEEECCCce-EEEeecCCCCcceeeeee
Q psy12655 2 PISKIHARQIFDSRGNPT-------------------------------VEVDLTTELGLF-RAAVPSGASTGIYEALEL 49 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pT-------------------------------vevev~~~~g~~-ra~~psGaS~G~~Ea~el 49 (299)
+|++|..+.|--.+-+|. |=|+|.|++|.. -|-+..
T Consensus 27 ~I~~i~~~~v~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~r~VlVri~td~G~~G~GE~~~------------ 94 (412)
T 4h1z_A 27 RVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYG------------ 94 (412)
T ss_dssp CEEEEEEEEEECC------------CCCCTTSEEECTTTCCEEESSCEEEEEEEEETTCCEEEEEEEC------------
T ss_pred eeeEEEEEEEecccCCccccccccccccccccceeeccCcccCCCCCCcEEEEEEECCCCEEEEecCC------------
Confidence 689999988877666653 668889988864 333211
Q ss_pred ccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCC
Q psy12655 50 RDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGV 128 (299)
Q Consensus 50 rd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~ 128 (299)
.-+.....+.|++.++|.|+ |.|+.+...|-+.|.++- .......+..+|+.|+-+|++-+.++..|+
T Consensus 95 ---------~~~~~~~~~~i~~~lap~li--G~dp~~~~~i~~~l~~~~~~~~~~~g~~~~A~saiD~ALwDl~gK~~g~ 163 (412)
T 4h1z_A 95 ---------LVAPRATMEIIDDLLADFTI--GRDPFDAAAIHDDLYDLMRVRGYTGGFYVDALAAIDIALWDLAGKLAGL 163 (412)
T ss_dssp ---------SSCHHHHHHHHHHTHHHHHT--TSCGGGHHHHHHHHHTTTGGGTCCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------CCCHHHHHHHHHHHHHHHhC--CCCcchHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHcCC
Confidence 11223455667888999999 789999888877775432 111111112358889999999999999999
Q ss_pred chHHHHHhhhCCCcccccc
Q psy12655 129 PLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 129 pLy~yi~~l~g~~~~~lP~ 147 (299)
|||+.|+ |.....+|+
T Consensus 164 Pl~~LLG---G~~~~~v~~ 179 (412)
T 4h1z_A 164 PVCKLLG---GQRRDRIAA 179 (412)
T ss_dssp BGGGGTT---CCCCSEEEE
T ss_pred CHHHhcC---CCCCceEEE
Confidence 9999998 765444443
|
| >4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-07 Score=91.95 Aligned_cols=227 Identities=14% Similarity=0.166 Sum_probs=130.5
Q ss_pred CceeeEEEeEEeC----CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH
Q psy12655 1 MPISKIHARQIFD----SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75 (299)
Q Consensus 1 ~~I~~v~ar~ilD----srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p 75 (299)
|+|++|+.+.+=- -.+...+=|+|+|++|.. -|-+++. . +.+ ......|++.++|
T Consensus 2 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~-~----------------~~~---~~~~~~i~~~l~p 61 (404)
T 4e5t_A 2 MRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGITGYGEIYNA-T----------------FGP---DLVAKMAEDVFAR 61 (404)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCC-S----------------SCH---HHHHHHHHHHHHH
T ss_pred CEEEEEEEEEeccCCcccCCCceEEEEEEECCCCEEEEeeccC-C----------------Cch---HHHHHHHHHHHHH
Confidence 8999999998731 124678999999999975 5544321 0 111 2223446667899
Q ss_pred HHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 76 ~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
.|+ |.|+.+...+-+.|..- +-....-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+ ..-+
T Consensus 62 ~li--G~dp~~~e~~~~~~~~~--~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~ 132 (404)
T 4e5t_A 62 QFA--GEDPHHIEKLWHKTYGA--GYTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLG---GKVHERLRS--YTYL 132 (404)
T ss_dssp HTT--TSCTTCHHHHHHHHHTT--TSCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEE--EEEC
T ss_pred Hhc--CCChhHHHHHHHHHHHh--hhhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcC---CCCcCeEEE--EEEe
Confidence 999 78999887777766432 11100111 3588999999999999999999999999 754334543 3222
Q ss_pred cC-CcCC--CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccC-CC---CCcCCCCCChHHHH
Q psy12655 154 NG-GSHA--GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVG-DE---GGFAPNILDNKEGL 224 (299)
Q Consensus 154 nG-G~ha--~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vg-de---Ggfap~~~~~e~aL 224 (299)
.. +.|. +. ++ ..+..+.++..+.+ ++.++. |... ..+| +. +|..+...+.++.+
T Consensus 133 ~~~~~~~~p~~--d~------~~~~~~~e~~~~~a-------~~~~~~--G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~ 195 (404)
T 4e5t_A 133 YPTDGDVYPDP--DK------PNVYNDADMAAEAA-------AKAVDQ--GFTAVKFDPAGAYTIYDGHQPSLEDLERSE 195 (404)
T ss_dssp CC------------C------CCTTTCHHHHHHHH-------HHHHHH--TCSEEEECCSCCCBTTCSBCCCHHHHHHHH
T ss_pred ccccccccccc--cc------cccCCCHHHHHHHH-------HHHHHc--CCCEEeeCCCCCCcccccccccHHHHHHHH
Confidence 10 1110 00 00 01123444433322 233322 3101 1222 11 22333333456666
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++ .+|.+|-+.+ .+.+++|.+.+||+|+.
T Consensus 196 ~~v~avR~a~G--~d~~l~vDa-------n~---------------~~~~~~A~~~-~~~l~~~~i~~iEeP~~ 244 (404)
T 4e5t_A 196 AFCKQIRAAVG--TKADLLFGT-------HG---------------QFTVSGAKRL-ARRLEAYDPLWFEEPIP 244 (404)
T ss_dssp HHHHHHHHHHG--GGSEEEECC-------CS---------------CBCHHHHHHH-HHHHGGGCCSEEECCSC
T ss_pred HHHHHHHHHcC--CCCeEEEeC-------CC---------------CcCHHHHHHH-HHHHhhcCCcEEECCCC
Confidence 76655445555 467888885 11 2455676654 45667899999999985
|
| >3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.2e-06 Score=84.14 Aligned_cols=208 Identities=16% Similarity=0.169 Sum_probs=130.3
Q ss_pred ceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 2 PISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 2 ~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
+|++|..+.+ -.|+|. ..+=|+|.|++|.. .|-+. .+.. ..|++.+...+...
T Consensus 7 ~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~-----------~~~~---~~y~~e~~~~~~~~ 72 (382)
T 3dgb_A 7 AIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGEST-----------TIGG---LAYGNESPDSIKTN 72 (382)
T ss_dssp BEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEE-----------CSTT---TTSSSCCHHHHHHH
T ss_pred eeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCCEEEEecc-----------cCCC---CccCCCCHHHHHHH
Confidence 3888887654 356663 46788999999875 44332 1110 13666677777888
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|++.++|.|+ |.++.+...+-+.|... .| ...|+.|+-+|+.-..++..|+|||+.|+ |.....+|+
T Consensus 73 i~~~l~p~li--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~~ 140 (382)
T 3dgb_A 73 IDRFVAPLLI--GQDASNINAAMLRLEQSIRG-------NTFAKSGIESALLDAQGKRLGLPVSELLG---GRVRDALPV 140 (382)
T ss_dssp HHHTHHHHHT--TSBTTCHHHHHHHHHHHCCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEB
T ss_pred HHHHHHHHhc--CCCccCHHHHHHHHHHHhcC-------chHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCeeeE
Confidence 8888999999 78999988887777553 22 24688999999999999999999999998 654444554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
- ..+.. + +..+.++ +.++.+++ .|. +-..+|. .++++-++
T Consensus 141 ~--~t~~~------------------~--~~~~~~~-------~~~~~~~~-~G~~~~KiKvg~--------~~~~~d~~ 182 (382)
T 3dgb_A 141 A--WTLAS------------------G--DTAKDIA-------EAQKMLDL-RRHRIFKLKIGA--------GEVDRDLA 182 (382)
T ss_dssp C--EEECS------------------S--CHHHHHH-------HHHHHHHT-TSCSEEEEECCS--------SCHHHHHH
T ss_pred E--EEecC------------------C--ChHHHHH-------HHHHHHHh-CCCCEEEEeeCC--------CCHHHHHH
Confidence 2 11111 1 2222222 22333331 131 1112331 23566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++ .+|.++-+.+ .+.+++|+|.+||+|+.
T Consensus 183 ~v~avR~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~-~~~l~~~~i~~iEqP~~ 230 (382)
T 3dgb_A 183 HVIAIKKALG--DSASVRVDV-------NQ---------------AWDEAVALRA-CRILGGNGIDLIEQPIS 230 (382)
T ss_dssp HHHHHHHHHG--GGSEEEEEC-------TT---------------CBCHHHHHHH-HHHHHTTTCCCEECCBC
T ss_pred HHHHHHHHcC--CCCeEEEeC-------CC---------------CCCHHHHHHH-HHHHhhcCcCeeeCCCC
Confidence 6654444445 468888885 12 2455665554 45667899999999985
|
| >3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.6e-07 Score=90.63 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=81.3
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+...+ ..++...|=|+|.|++|.. -|-+.. ++ .. ......|++.++|.|+
T Consensus 6 mkIt~v~~~~~-~~~~~~~~~V~v~td~G~~G~GE~~~---~~---------------~~---~~~~~~i~~~l~p~li- 62 (401)
T 3sbf_A 6 TIISDIHCIIT-KPDRHNLITVVVETNEGVTGFGCATF---QQ---------------RP---LAVKTMVDEYLKPILI- 62 (401)
T ss_dssp CBEEEEEEEEE-CSSSSCEEEEEEEETTSCEEEEECCC---TT---------------SH---HHHHHHHHHTHHHHHT-
T ss_pred eEEEEEEEEEE-cCCCceEEEEEEEeCCCCEEEEcccc---CC---------------CH---HHHHHHHHHHHHHHHc-
Confidence 89999999866 3333378999999999975 554321 11 11 1223456677999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
|.|+.+...+-+.|...- -.....+..+|+.|+-+|+.=..++..|+|||+.|+ |.....+|
T Consensus 63 -G~d~~~~e~~~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 124 (401)
T 3sbf_A 63 -GKNANNIEDLWQMMMVNA-YWRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFG---GKSRDAIP 124 (401)
T ss_dssp -TSBTTCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEE
T ss_pred -CCChhhHHHHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhC---CCcCCeee
Confidence 789999888877775431 000001123689999999999999999999999998 65433444
|
| >3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A | Back alignment and structure |
|---|
Probab=98.80 E-value=2e-07 Score=90.52 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=124.6
Q ss_pred CceeeEEEeEEe------------------------CCCCCe----eEEEEEEECCCce-EEEeecCCCCcceeeeeecc
Q psy12655 1 MPISKIHARQIF------------------------DSRGNP----TVEVDLTTELGLF-RAAVPSGASTGIYEALELRD 51 (299)
Q Consensus 1 ~~I~~v~ar~il------------------------DsrG~p----Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd 51 (299)
|+|++|+++.+= +|||.- +|=|+|.|++|.. .|-+..+
T Consensus 23 m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~~G~GE~~~~------------- 89 (412)
T 3stp_A 23 MKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGTIGIGNAALA------------- 89 (412)
T ss_dssp CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSCEEEEEECSS-------------
T ss_pred cEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCCEEEEeccCC-------------
Confidence 899999998761 444433 5778999998875 5532110
Q ss_pred CCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCccc--CCChhhHHHHHHHHHHHHHhcCCc
Q psy12655 52 NDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSK--FGANAILGVSLAVAKAGAAKKGVP 129 (299)
Q Consensus 52 ~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~--lGaNailavSlA~akAaA~~~~~p 129 (299)
+ ..+...|++.++|.|+ |.|+.+-..+-+.|.... ....+ +...|+.|+-+|+.-+.|+..|+|
T Consensus 90 -------~---~~~~~~i~~~l~p~Li--G~dp~~~e~l~~~~~~~~--~~~g~~g~~~~A~saiD~ALwDl~gK~~g~P 155 (412)
T 3stp_A 90 -------P---SVVKKVIDDWYAPLVI--GEDPFDYAYIWEKMYRRS--HAWGRKGIGMTAISAIDIAIWDLMGKLVGKP 155 (412)
T ss_dssp -------H---HHHHHHHHHTTHHHHT--TSCGGGHHHHHHHHHHHT--HHHHSSTHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred -------H---HHHHHHHHHHHHHHHC--CCCcchHHHHHHHHHHHh--hhcCCcchHHHHHHHHHHHHHHHHhhhcCCC
Confidence 0 1234556777999999 789998877766664421 00001 224688999999999999999999
Q ss_pred hHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--ccc
Q psy12655 130 LYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAV 207 (299)
Q Consensus 130 Ly~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~v 207 (299)
||+.|+ |.....+| ...-. . ...+.++..+ +.++.++ .|-.. ..+
T Consensus 156 v~~LLG---G~~r~~v~--~y~s~--~-----------------~~~~~e~~~~-------~a~~~~~--~Gf~~iKik~ 202 (412)
T 3stp_A 156 VFKLLG---GRTKDRIP--VYYSK--L-----------------YAGSIEAMQK-------EAEEAMK--GGYKAFKSRF 202 (412)
T ss_dssp HHHHHT---CCSSSSEE--EEEEC--C-----------------CSCCHHHHHH-------HHHHHHT--TTCSEEEEEC
T ss_pred HHHhcC---CCCCceEE--EEEEe--c-----------------CCCCHHHHHH-------HHHHHHH--cCCCEEEEec
Confidence 999998 65333343 33311 0 0113333322 2223322 23100 112
Q ss_pred CCC---CCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHH
Q psy12655 208 GDE---GGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEF 284 (299)
Q Consensus 208 gde---Ggfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l 284 (299)
|.. || .+.++.++.+...-+..| .++.|.+|+- + .+|.+|-+.+.. .
T Consensus 203 g~gp~dg~-----~~~~~die~v~avReavG--~d~~L~vDaN-------~---------------~~~~~~Ai~~~~-~ 252 (412)
T 3stp_A 203 GYGPKDGM-----PGMRENLKRVEAVREVIG--YDNDLMLECY-------M---------------GWNLDYAKRMLP-K 252 (412)
T ss_dssp CCCGGGHH-----HHHHHHHHHHHHHHHHHC--SSSEEEEECT-------T---------------CSCHHHHHHHHH-H
T ss_pred ccCccccc-----chHHHHHHHHHHHHHHcC--CCCeEEEECC-------C---------------CCCHHHHHHHHH-H
Confidence 211 11 234566666655444555 4688888851 1 245677776655 4
Q ss_pred HhcCCeeEeecCCC
Q psy12655 285 IKEYPIVSIEDPML 298 (299)
Q Consensus 285 ~~~yPIvsiEDp~~ 298 (299)
+++|.|.+||+|+.
T Consensus 253 Le~~~i~~iEeP~~ 266 (412)
T 3stp_A 253 LAPYEPRWLEEPVI 266 (412)
T ss_dssp HGGGCCSEEECCSC
T ss_pred HHhcCCCEEECCCC
Confidence 57899999999985
|
| >3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-06 Score=85.97 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=80.6
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECC-Cce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHh
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTEL-GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALL 78 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~-g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li 78 (299)
|+|++|+...+ +..+...|=|+|.|++ |.. -|-+.. .+ .+ ......|++.++|.|+
T Consensus 27 mkIt~v~~~~~-~~~~~~~v~V~v~Td~~Gi~G~GE~~~---~~---------------~~---~~~~~~i~~~l~p~Li 84 (440)
T 3t6c_A 27 LFITNVKTILT-APGGIDLVVVKIETNEPGLYGLGCATF---TQ---------------RI---YAVQSAIDEYLAPFLI 84 (440)
T ss_dssp CCEEEEEEEEE-CTTSSCEEEEEEEESSTTCEEEEECCC---GG---------------GH---HHHHHHHHTTHHHHHT
T ss_pred CEEEEEEEEEE-CCCCceEEEEEEEEcCCCCEEEEeecc---CC---------------CH---HHHHHHHHHHHHHHHc
Confidence 78999999755 4333368999999999 875 444321 01 11 2233456677999999
Q ss_pred cCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 79 KESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 79 ~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
|.|+.+...|-+.|...- -.....+..+|+.|+-+|+.=..++..|+|||+.|+ |.....+|
T Consensus 85 --G~dp~~ie~i~~~~~~~~-~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 146 (440)
T 3t6c_A 85 --GKDPARIEDIWQSAAVSG-YWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLG---GKCRDGIA 146 (440)
T ss_dssp --TCCTTCHHHHHHHHHHTT-SCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSSEE
T ss_pred --CCChhhHHHHHHHHHHhc-ccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeeE
Confidence 789999888877775431 000001113689999999999999999999999999 65433454
|
| >3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.5e-06 Score=82.86 Aligned_cols=205 Identities=19% Similarity=0.180 Sum_probs=127.8
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- .|+| ..++=|+|.|++|.. .|-+.. + ..|.|.++..+..
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 68 (365)
T 3ik4_A 5 TTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTLGLGEAAP-----------F-----PAVSGETQTGTSA 68 (365)
T ss_dssp TBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCEEEEEECC-----------C-----CTTTCCCHHHHHH
T ss_pred CEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCCEEEEeccc-----------C-----CCcCcCCHHHHHH
Confidence 688888876552 4455 356888999998865 443221 1 1355666677777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.++ .+.|.|+ |.++.+...+-+.|...-. ....|+.|+.+|+.-+.++..|+|||+.|+ |.. ..+|+
T Consensus 69 ~l~-~l~~~l~--G~d~~~~~~~~~~l~~~~~------~~~~a~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~v~~ 135 (365)
T 3ik4_A 69 AIE-RLQSHLL--GADVRGWRKLAAMLDHAEH------EAAAARCGLEMAMLDALTRHYHMPLHVFFG---GVS-KQLET 135 (365)
T ss_dssp HHH-HHGGGTT--TCBGGGHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEEB
T ss_pred HHH-HHHHHHc--CCCccCHHHHHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceee
Confidence 775 6899998 7899888877777755321 234789999999999999999999999998 653 33443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
..-+ +..+..+..+ ++++.++. |. +-..+|. ++.++-++
T Consensus 136 --~~~~--------------------~~~~~e~~~~-------~a~~~~~~--G~~~iK~Kvg~--------~~~~~d~~ 176 (365)
T 3ik4_A 136 --DMTI--------------------TAGDEVHAAA-------SAKAILAR--GIKSIKVKTAG--------VDVAYDLA 176 (365)
T ss_dssp --CEEE--------------------CCSCHHHHHH-------HHHHHHHT--TCCCEEEECCS--------SCHHHHHH
T ss_pred --eEEe--------------------cCCCHHHHHH-------HHHHHHHc--CCCEEEEEeCC--------CCHHHHHH
Confidence 1111 1234433332 23333332 32 1112332 24567777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHH-hcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFI-KEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~-~~yPIvsiEDp~~ 298 (299)
.+...-+.. +++.|.+|+ + ..+|.++-+.+...|. ++|+|.+||+|+.
T Consensus 177 ~v~avr~~~---~~~~l~vDa-------N---------------~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~ 225 (365)
T 3ik4_A 177 RLRAIHQAA---PTAPLIVDG-------N---------------CGYDVERALAFCAACKAESIPMVLFEQPLP 225 (365)
T ss_dssp HHHHHHHHS---SSCCEEEEC-------T---------------TCCCHHHHHHHHHHHHHTTCCEEEEECCSC
T ss_pred HHHHHHHhC---CCCeEEEEC-------C---------------CCCCHHHHHHHHHHHhhCCCCceEEECCCC
Confidence 665443333 357888885 1 2356677777766664 6899999999985
|
| >3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.8e-06 Score=82.90 Aligned_cols=205 Identities=17% Similarity=0.224 Sum_probs=128.1
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. .++=|+|.|++|.. .|-++.. ..|.|.+......
T Consensus 3 MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~Ge~~~~----------------~~~~get~~~~~~ 66 (379)
T 3r0u_A 3 SKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVKGYGVAPAT----------------TAITGDTLQGMQY 66 (379)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECC----------------HHHHCCCHHHHHH
T ss_pred CEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCCEEEEEEECC----------------CCccCCCHHHHHH
Confidence 68999976533 355553 56788999999875 5544321 0244555666677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.+...+-+.|...- ..-..|+.|+-+|+.-+.++..|+|||+.|+ |. ...+|+
T Consensus 67 ~i~~~l~p~l~--G~d~~~~~~~~~~~~~~~------~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~-r~~v~~ 134 (379)
T 3r0u_A 67 IIREIFAPVIL--GSDLSDYKQTLELAFKKV------MFNSAAKMAIDLAYHDLLAKEQDISVAKLLG---AK-ANSIVT 134 (379)
T ss_dssp HHHHTTHHHHT--TCBGGGHHHHHHHHHTTC------SSCHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-CCEEEB
T ss_pred HHHHHhHHHhc--CCCcccHHHHHHHHHHhc------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCeEEE
Confidence 78888999998 788887766655544321 1234689999999999999999999999998 64 334443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~aL~ 225 (299)
..-+ | ..+.++.++ ++++.+. .|.. -..+|. ++++-++
T Consensus 135 --y~t~--g------------------~~~~e~~~~-------~a~~~~~--~Gf~~~KlK~g~---------~~~~d~~ 174 (379)
T 3r0u_A 135 --DVSI--S------------------CGNVAETIQ-------NIQNGVE--ANFTAIKVKTGA---------DFNRDIQ 174 (379)
T ss_dssp --CEEE--C------------------CCCHHHHHH-------HHHHHHH--TTCCEEEEECSS---------CHHHHHH
T ss_pred --EEEe--c------------------CCCHHHHHH-------HHHHHHH--cCCCEEeeecCC---------CHHHHHH
Confidence 2211 1 123333322 3333333 2421 112331 4567777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++ .+|.++-+.+. +.+++ |+|.+||+|+.
T Consensus 175 ~v~avR~a~g--~~~~L~vDa-------N~---------------~w~~~~A~~~~-~~l~~~~~~l~~iEeP~~ 224 (379)
T 3r0u_A 175 LLKALDNEFS--KNIKFRFDA-------NQ---------------GWNLAQTKQFI-EEINKYSLNVEIIEQPVK 224 (379)
T ss_dssp HHHHHHHHCC--TTSEEEEEC-------TT---------------CCCHHHHHHHH-HHHHTSCCCEEEEECCSC
T ss_pred HHHHHHHhcC--CCCeEEEeC-------CC---------------CcCHHHHHHHH-HHHhhcCCCcEEEECCCC
Confidence 7665555555 468888885 12 24556766554 45566 88999999985
|
| >3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.8e-06 Score=83.99 Aligned_cols=118 Identities=19% Similarity=0.307 Sum_probs=81.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.|+..|=|+|.|++|.. -|-+.. .|. .......|++.++|.|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~Li- 78 (424)
T 3v3w_A 23 MKIVDAKVIVT--CPGRNFVTLKIVTDQGIYGIGDATL---NGR------------------EKSVVSYLEDYLIPVLI- 78 (424)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TTC------------------HHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEeccC---CCC------------------hHHHHHHHHHHHHHHhc-
Confidence 78999998755 345578999999999975 444321 111 12234456777999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...|-+.|...-- .....+...|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 79 -G~dp~~ie~i~~~~~~~~~-~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 141 (424)
T 3v3w_A 79 -GRDPQQIEDIWQFFYRGAY-WRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLG---GKSRERILS 141 (424)
T ss_dssp -TSCTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCSCSSEEE
T ss_pred -CCChhhHHHHHHHHHhccc-cCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CcCCCceeE
Confidence 7899998888777754310 00001113589999999999999999999999999 754334443
|
| >3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3.2e-07 Score=87.62 Aligned_cols=214 Identities=19% Similarity=0.195 Sum_probs=125.6
Q ss_pred CceeeEEEeEE---------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI---------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i---------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -+|+|. ++|=|+|+|++|.. .|-+.. .. . -+ +-....
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~~G~GE~~~-----------~~--~--~~---~~~~~~ 62 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGT-----------HA--H--LP---SDRLIT 62 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSCEEEEEEEE-----------CC--C--HH---HHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCCEEEEeccC-----------cc--c--cC---cHHHHH
Confidence 89999998865 345543 56889999999875 443221 00 0 01 112234
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhc---CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLD---GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD---gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
..|++.++|.|+ |.|+.+..++-+.|.... |... ..+...|+.|+-+|+.-..|+..|+|||+.|+ |....
T Consensus 63 ~~i~~~l~p~li--G~d~~~~~~~~~~l~~~~~~~~~g~-~g~~~~A~said~AlwDl~gk~~g~Pv~~llG---g~~~~ 136 (372)
T 3tj4_A 63 SCISDCYAPLLL--GEDASDHSRLWTKLARYPSLQWVGR-AGITHLALAAVDVALWDIKAKKAGVPLWHYLG---GARTA 136 (372)
T ss_dssp HHHHHTTHHHHT--TSBTTCHHHHHHHHHTCHHHHTTCS-STHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS
T ss_pred HHHHHHHHHHhC--CCChhhHHHHHHHHHHhhHhhcCCc-ccHHHHHHHHHHHHHHHHhccccCCcHHHHcC---CCCCC
Confidence 446668999999 789999888777775421 1100 01123688999999999999999999999998 65433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+ |...-+ ||-. ..+..+.++. .++.+.. +|. +-..+|. .+++
T Consensus 137 ~v--~~y~s~-~~~~----------------~~~~~~~~~~-------a~~~~~~-~G~~~~K~Kvg~--------~~~~ 181 (372)
T 3tj4_A 137 GV--EAYNTD-IGWL----------------SFTLEDLLAG-------SARAVEE-DGFTRLKIKVGH--------DDPN 181 (372)
T ss_dssp CE--EEEECT-TCCT----------------TSCHHHHHHH-------HHHHHHT-TCCCEEEEECCC--------SSHH
T ss_pred Ce--EEEEec-CCcc----------------CCCHHHHHHH-------HHHHHHc-cCCCEEEEcCCC--------CCHH
Confidence 34 433221 1110 1234333332 2333331 131 1112321 1456
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...-+..| .++.|.+|+ ++ .+|.+|.+++... +++|++.+||+|+.
T Consensus 182 ~d~~~v~avR~~~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 233 (372)
T 3tj4_A 182 IDIARLTAVRERVD--SAVRIAIDG-------NG---------------KWDLPTCQRFCAA-AKDLDIYWFEEPLW 233 (372)
T ss_dssp HHHHHHHHHHHHSC--TTCEEEEEC-------TT---------------CCCHHHHHHHHHH-TTTSCEEEEESCSC
T ss_pred HHHHHHHHHHHHcC--CCCcEEeeC-------CC---------------CCCHHHHHHHHHH-HhhcCCCEEECCCC
Confidence 67777665555555 468888885 12 2456776666554 68899999999985
|
| >3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=5.6e-07 Score=87.41 Aligned_cols=118 Identities=21% Similarity=0.330 Sum_probs=82.1
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.|+..|=|+|.|++|.. -|-+.. .|. .......|++.++|.|+
T Consensus 17 mkIt~v~~~~~--~~~~~~~~V~v~td~G~~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~Li- 72 (418)
T 3r4e_A 17 MKITAARVIIT--CPGRNFVTLKIETDQGVYGIGDATL---NGR------------------ELSVVAYLQEHVAPCLI- 72 (418)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TTC------------------HHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccC---CCC------------------hHHHHHHHHHHHHHHhc-
Confidence 89999998765 345678999999999975 444321 111 12234456777999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...|-+.|...-- .....+...|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 73 -G~dp~~ie~l~~~~~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 135 (418)
T 3r4e_A 73 -GMDPRRIEDIWQYVYRGAY-WRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLG---GRSRDGIMV 135 (418)
T ss_dssp -TSCTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSCSSEEE
T ss_pred -CCChhhHHHHHHHHHHhcc-cCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CccCCeeeE
Confidence 7899998888777754310 00001113588999999999999999999999999 754334444
|
| >3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.2e-06 Score=84.27 Aligned_cols=213 Identities=16% Similarity=0.139 Sum_probs=129.0
Q ss_pred CceeeEEEeEEeCCCCC----eeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHH
Q psy12655 1 MPISKIHARQIFDSRGN----PTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIA 74 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~----pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~ 74 (299)
|+|++|..+.+=-.--. +.|=|+|.|++|.. .|-+ |.| + ...|.|..+ .+.+.++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~V~v~td~G~~G~GE~~~~~-----------~---~p~~~~e~~-----~i~~~l~ 61 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGLTGIGEMSDFS-----------H---LPLYSVDLH-----DLKQGLL 61 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSCEEEEEECCCS-----------S---SSSCCCCHH-----HHHHHHH
T ss_pred CEEEEEEEEEEecccCCCcccceEEEEEEECCCCEEEecccccc-----------C---CCccchhHH-----HHHHHHH
Confidence 89999999877321111 56899999999976 5543 221 0 013444444 4567799
Q ss_pred HHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 75 PALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 75 p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
|.|+ |.|+.+...+-+.|...-- +....+-+..|+.|+-+|+.-+.|+..|+|||+.|+ |.....+|+ ...+
T Consensus 62 p~li--G~d~~~~~~~~~~l~~~~~~~~~~~~g~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~--y~t~ 134 (391)
T 3gd6_A 62 SILL--GQNPFDLMKINKELTDNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLG---GRVKEKIKV--CYPI 134 (391)
T ss_dssp HHHT--TCCTTCHHHHHHHHHHHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEB--CEEE
T ss_pred HHhC--CCCccCHHHHHHHHHHHhhhcccccCcchHHHHHHHHHHHHHHhcccCCcHHHHhC---CCcCCeEEe--eEEe
Confidence 9999 7899999888888865321 111111234688999999999999999999999998 654334443 2222
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAI 231 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi 231 (299)
. .|. ...+.++..+ +.++.++. |. +-..+|. ++++-++.+...-
T Consensus 135 ~--~~~--------------~~~~~e~~~~-------~a~~~~~~--G~~~~KiKvG~---------~~~~d~~~v~avR 180 (391)
T 3gd6_A 135 F--RHR--------------FSEEVESNLD-------VVRQKLEQ--GFDVFRLYVGK---------NLDADEEFLSRVK 180 (391)
T ss_dssp C--CCS--------------STTHHHHHHH-------HHHHHHHT--TCCEEEEECSS---------CHHHHHHHHHHHH
T ss_pred c--ccc--------------cCCCHHHHHH-------HHHHHHHc--CCCEEEEeeCC---------CHHHHHHHHHHHH
Confidence 1 000 0122222222 23333332 31 1112331 3567777665544
Q ss_pred HHcccccceEEE-eeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCe--eEeecCCC
Q psy12655 232 EKAGYTGKVEIG-MDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPI--VSIEDPML 298 (299)
Q Consensus 232 ~~ag~~~~i~ia-lD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPI--vsiEDp~~ 298 (299)
+..| .++.|. +|+ ++. +|.+|-+.+ .+.+++|++ .+||+|+.
T Consensus 181 ~a~g--~~~~l~~vDa-------n~~---------------~~~~~A~~~-~~~l~~~~i~~~~iEqP~~ 225 (391)
T 3gd6_A 181 EEFG--SRVRIKSYDF-------SHL---------------LNWKDAHRA-IKRLTKYDLGLEMIESPAP 225 (391)
T ss_dssp HHHG--GGCEEEEEEC-------TTC---------------SCHHHHHHH-HHHHTTCCSSCCEEECCSC
T ss_pred HHcC--CCCcEEEecC-------CCC---------------cCHHHHHHH-HHHHHhcCCCcceecCCCC
Confidence 4446 467788 886 122 455665554 556688998 99999986
|
| >3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP} | Back alignment and structure |
|---|
Probab=98.74 E-value=6.2e-07 Score=87.29 Aligned_cols=118 Identities=19% Similarity=0.259 Sum_probs=80.5
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+...+ ...+...|=|+|.|++|.. -|-+.. .+ .. ......|++.++|.|+
T Consensus 27 mkIt~v~~~~~-~~~~~~~v~V~v~td~Gi~G~GE~~~---~~---------------~~---~~~~~~i~~~l~p~Li- 83 (422)
T 3tji_A 27 VIIKNIECFIT-RPDRHNLVTVRVTTEQGITGHGCATF---QQ---------------RP---LAVKTLVDEYLQPLMI- 83 (422)
T ss_dssp CBEEEEEEEEE-CSSSSCEEEEEEEETTSCCEEEECCC---TT---------------SH---HHHHHHHHHTHHHHHT-
T ss_pred cEEEEEEEEEE-cCCCccEEEEEEEECCCCEEEEeccC---CC---------------CH---HHHHHHHHHHHHHHhC-
Confidence 78999998765 3323378999999999975 444321 01 11 2223456677999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
|.|+.+...+-+.|....- .....+..+|+.|+-+|+.=..++..|+|||+.|+ |.....+|
T Consensus 84 -G~dp~~ie~~~~~l~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 145 (422)
T 3tji_A 84 -GRDANNIEDLWQMMNVNAY-WRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFG---GKSRDAIP 145 (422)
T ss_dssp -TSBTTCHHHHHHHHHHTTS-SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEE
T ss_pred -CCCcccHHHHHHHHHHhhh-ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCCeEE
Confidence 7899998887777754310 00001123689999999999999999999999998 65433444
|
| >3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=98.73 E-value=9.1e-07 Score=84.58 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=124.8
Q ss_pred CceeeEEEeEEeC-------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 1 MPISKIHARQIFD-------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 1 ~~I~~v~ar~ilD-------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
|+|++|+.+.+=- +.+...|=|+|+|++|.. -|-. +.+.......|++.
T Consensus 3 MkI~~i~~~~~~~P~~~~~~~~~~~~~~V~v~td~G~~G~GE~-----------------------~~~~~~~~~~i~~~ 59 (374)
T 3sjn_A 3 LKITDIEVLHLRVPAMDADCEWGEDAVIVKVHTDKGIVGVGEA-----------------------DSSPLVVQACIEAP 59 (374)
T ss_dssp CBEEEEEEEEEESSCTTSCCCTTSEEEEEEEEETTSCEEEEEE-----------------------SSCHHHHHHHHHCC
T ss_pred cEEEEEEEEEEeccCcCCcCcccceEEEEEEEECCCCEEEEcC-----------------------CCChHHHHHHHHhh
Confidence 7899999998631 222334889999999864 3331 11223344556665
Q ss_pred --------HHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 73 --------IAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 73 --------i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
++|.|+ |.|+.+...+-+.|... .+... .-+...|+.|+-+|+.-..++..|+|||+.|+ |....
T Consensus 60 ~~~~~~~~l~p~li--G~d~~~~~~~~~~l~~~~~~~~~-~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~ 133 (374)
T 3sjn_A 60 QTNFYCNGLKRLLI--GENALEIERLWNKMYWGSNYMGR-RGAGIHAISAIDIALWDIAGQFYGVPVHTLLG---GKYRD 133 (374)
T ss_dssp CSBTTBCCHHHHHT--TSBTTCHHHHHHHHHHHTTTTCS-SBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS
T ss_pred hccchHhHHHHHHc--CCCcccHHHHHHHHHHhhhhcCC-ccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCcCC
Confidence 999999 78999988887777542 22111 11223789999999999999999999999999 74433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+ . +|-.. |.....+.+. .++.++. |. +-..+|..| .+++
T Consensus 134 ~v~~--y----~~~~~------------~~~~e~~~~~----------a~~~~~~--Gf~~iKlk~g~~g------~~~~ 177 (374)
T 3sjn_A 134 KIRC--Y----GTFIP------------ADKPEDNVAI----------VQGLKDQ--GFSSIKFGGGVMG------DDPD 177 (374)
T ss_dssp EEEE--E----EEECC------------CSSGGGGHHH----------HHHHHTT--TCSEEEEECTTTT------SCHH
T ss_pred ceeE--E----eccCC------------CCCHHHHHHH----------HHHHHHc--CCCEEEeccCCCC------CCHH
Confidence 4543 2 11100 1111122222 2222221 31 111233222 2467
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccC-HHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLP-ADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t-~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++.+...-+..| .++.|.+|+- + .+| .+|-+.+. +.+++|++.+||+|+.
T Consensus 178 ~d~~~v~avR~a~g--~~~~l~vDan-------~---------------~~~d~~~A~~~~-~~l~~~~i~~iEqP~~ 230 (374)
T 3sjn_A 178 TDYAIVKAVREAAG--PEMEVQIDLA-------S---------------KWHTCGHSAMMA-KRLEEFNLNWIEEPVL 230 (374)
T ss_dssp HHHHHHHHHHHHHC--SSSEEEEECT-------T---------------TTCSHHHHHHHH-HHSGGGCCSEEECSSC
T ss_pred HHHHHHHHHHHHhC--CCCeEEEECC-------C---------------CCCCHHHHHHHH-HHhhhcCceEEECCCC
Confidence 77777655444446 4688888851 1 244 66766554 4557899999999985
|
| >3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=6.7e-07 Score=86.59 Aligned_cols=117 Identities=21% Similarity=0.249 Sum_probs=82.1
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.+.++.+=|+|.|++|.. -|-+... |+..++..+ + +.++|.|+
T Consensus 3 MkI~~i~~~~~-~~~~~~~~~V~v~td~G~~G~GE~~~~------------------~~~~~~~~~---i-~~l~p~li- 58 (409)
T 3go2_A 3 LKVVSVDTLCC-DAGWRNYHFVKLTTDEGIVGWSEFDEG------------------FGSPGVTAV---I-EQLGKRLV- 58 (409)
T ss_dssp CBEEEEEEEEE-ECSSSEEEEEEEEETTCCEEEEEECST------------------TTCTTHHHH---H-HHHHHHHT-
T ss_pred CEEEEEEEEEE-CCCCccEEEEEEEECCCCEEEEeecCC------------------CCcHHHHHH---H-HHHHHHhc-
Confidence 79999999865 6666788999999999975 4443211 222234333 3 35899999
Q ss_pred CCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|... .+. ...+...|+.|+-+|+.=..|+..|+|||+.|+ |.....+|+
T Consensus 59 -G~d~~~~e~~~~~~~~~~~~~--~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 121 (409)
T 3go2_A 59 -GASVMEHERFFAEAYCLTRPA--TGGVVSEGIGAIENALLDAKAKTLNVPCYELLG---GKLRDRVPV 121 (409)
T ss_dssp -TSBTTCHHHHHHHHHHHHGGG--CSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSEEEE
T ss_pred -CCChhhHHHHHHHHHHHhccC--CchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeEEE
Confidence 78999988887777543 110 001112589999999999999999999999999 754344554
|
| >3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.9e-06 Score=82.81 Aligned_cols=209 Identities=18% Similarity=0.216 Sum_probs=130.1
Q ss_pred CceeeEEEeEE--------e-CCCC-----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQI--------F-DSRG-----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~i--------l-DsrG-----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+ | .|+| ..++=|+|.|++|.. .|-+ |.|. .|++.....
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~----------------~~~~e~~~~ 66 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFGS----------------TYIAAHAGG 66 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCEEEEEECCSTT----------------SSSSCCHHH
T ss_pred CEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCCEEEEecccCCC----------------ccCcccHHH
Confidence 78999998766 2 2445 357889999999875 4433 2211 244444555
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
+...++ .++|.|+ |.|+.+-..+-+.|... .| ...|+.|+-+|+.-..++..|+|||+.|+ |....
T Consensus 67 ~~~~l~-~l~~~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~~~ 133 (386)
T 3fv9_G 67 TRAALE-LLAPAIL--GMDPRQHDRIWDRMRDTLKG-------HRDARAALDIACWDIAAQAAGLPLCDMTG---GRVAG 133 (386)
T ss_dssp HHHHHH-HHHHHHT--TSCTTCHHHHHHHHHHHCSS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSS
T ss_pred HHHHHH-HHHHHhC--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCC
Confidence 566665 4899998 78999888777777543 22 24689999999999999999999999998 65433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+ ..-+. ..+.++..+ ++++.+.. |. +-..+|..+ . -.+++
T Consensus 134 ~v~~--y~s~~--------------------~~~~e~~~~-------~a~~~~~~--G~~~~K~Kvg~~~---~-~~~~~ 178 (386)
T 3fv9_G 134 PVPV--ISSIG--------------------GDTPEAMRA-------KVARHRAQ--GFKGHSIKIGASE---A-EGGPA 178 (386)
T ss_dssp CBCE--EEEEC--------------------SCCHHHHHH-------HHHHHHHT--TCCEEEEECCCCT---T-TTHHH
T ss_pred ceee--eEecC--------------------CCCHHHHHH-------HHHHHHHC--CCCEEEEeccCCC---C-CCCHH
Confidence 4443 22221 123333332 22333321 31 111233111 1 12456
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...-+..| .++.|.+|+ + ..+|.+|.+.+...|-+.|++ +||+|+.
T Consensus 179 ~d~~~v~avR~a~G--~~~~L~vDa-------N---------------~~~~~~~A~~~~~~l~~~~~i-~iEeP~~ 230 (386)
T 3fv9_G 179 LDAERITACLADRQ--PGEWYLADA-------N---------------NGLTVEHALRMLSLLPPGLDI-VLEAPCA 230 (386)
T ss_dssp HHHHHHHHHTTTCC--TTCEEEEEC-------T---------------TCCCHHHHHHHHHHSCSSCCC-EEECCCS
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEC-------C---------------CCCCHHHHHHHHHHhhccCCc-EEecCCC
Confidence 67776654433345 468889995 1 125567877777666578999 9999985
|
| >3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9.9e-07 Score=84.74 Aligned_cols=207 Identities=19% Similarity=0.233 Sum_probs=124.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -+|+|. +.+=|+|.|++|.. .|-+.. +. .+...++.
T Consensus 27 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~~---------~~~~~~~~ 86 (383)
T 3toy_A 27 AAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFA-----------YT---------RLALKPLV 86 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSCEEEEEEEC-----------SS---------GGGHHHHH
T ss_pred CEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCCEEEEEeeC-----------CC---------CchHHHHH
Confidence 68999988765 244543 56889999999875 553322 10 01233455
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.+.+.++|.|+ |.++.+.. +-+.|...- -..+. .+...|+.|+-+|+.-+.|+..|+|||+.|+ |.. . +
T Consensus 87 ~i~~~l~p~l~--G~d~~~~e-~~~~l~~~~~~~g~~-g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~--~ 156 (383)
T 3toy_A 87 HLVEDIGRELA--GKALVPVD-LMKAMDAKFRLLGWQ-GLVGMAVSGLDMAFWDALGQLAGKPVVELLG---GSA-R--P 156 (383)
T ss_dssp HHHHHHHHHTT--TCBCCHHH-HHHHHHHHTTTTCCS-THHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-C--C
T ss_pred HHHHHHHHHhC--CCCCCcHH-HHHHHHHHHhhcCCc-chHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-C--c
Confidence 56677999998 78888876 666664421 11110 0113689999999999999999999999998 643 2 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
+|...- +| ..+.++..+ ++++.++. +|. +-..+|. .++++-+
T Consensus 157 v~~y~s--~g------------------~~~~e~~~~-------~a~~~~~~-~G~~~~KlKvG~--------~~~~~d~ 200 (383)
T 3toy_A 157 IPAYDS--YG------------------VLDARDDER-------TLRTACDE-HGFRAIKSKGGH--------GDLATDE 200 (383)
T ss_dssp EEEEEE--CS------------------SCCHHHHHH-------HHHHHHHT-SCCCEEEEECCS--------SCHHHHH
T ss_pred eEEeEe--cC------------------CCCHHHHHH-------HHHHHHHc-cCCcEEEEecCC--------CCHHHHH
Confidence 344322 12 123333333 22333331 131 1112321 2456667
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++ .+|.+|-+++.. .+++|+|.+||+|+.
T Consensus 201 ~~v~avR~a~G--~~~~l~vDa-------N~---------------~~~~~~A~~~~~-~l~~~~i~~iEeP~~ 249 (383)
T 3toy_A 201 AMIKGLRALLG--PDIALMLDF-------NQ---------------SLDPAEATRRIA-RLADYDLTWIEEPVP 249 (383)
T ss_dssp HHHHHHHHHHC--TTSEEEEEC-------TT---------------CSCHHHHHHHHH-HHGGGCCSEEECCSC
T ss_pred HHHHHHHHHhC--CCCeEEEeC-------CC---------------CCCHHHHHHHHH-HHHhhCCCEEECCCC
Confidence 76655444456 468888885 11 245667666555 557899999999985
|
| >3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A | Back alignment and structure |
|---|
Probab=98.73 E-value=9.8e-07 Score=84.70 Aligned_cols=204 Identities=13% Similarity=0.152 Sum_probs=122.8
Q ss_pred CceeeEEEeEEe--------CCCCCe-----eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGNP-----TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~p-----Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+= +|+|.. ++=|+|.|++|.. .|-+ |.+. |. .+...+
T Consensus 8 mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~-----------------~~-e~~~~~ 69 (385)
T 3i6e_A 8 QKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWAV-----------------FT-GTPEAS 69 (385)
T ss_dssp SBEEEEEEEEEECCC--------------CEEEEEEEEETTSCEEEEEECCCTT-----------------TT-CCHHHH
T ss_pred cEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCCEEEEeeccCCC-----------------cC-CCHHHH
Confidence 678999877652 455543 6889999999875 4433 2211 11 234566
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...|++.++|.|+ |.++.+...+-+.|...- +-...|+.|+-+|+.-+.++..|+|||+.|+ |.....+
T Consensus 70 ~~~i~~~l~p~l~--G~d~~~~~~~~~~l~~~~------~~~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~r~~v 138 (385)
T 3i6e_A 70 YAALDRYLRPLVI--GRRVGDRVAIMDEAARAV------AHCTEAKAALDSALLDLAGRISNLPVWALLG---GKCRDTI 138 (385)
T ss_dssp HHHHHHTTHHHHT--TCBGGGHHHHHHHHHHHS------SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEE
T ss_pred HHHHHHHHHHHHC--CCCccCHHHHHHHHHHHh------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---cccCCce
Confidence 6778888999998 789988877777665431 1124689999999999999999999999998 6543445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
|+ ...+. ..+..+.++ ++++.+.+ |. +-..+|. .+.++-
T Consensus 139 ~~--~~t~~--------------------~~~~~~~~~-------~a~~~~~~--G~~~~K~Kvg~--------~~~~~d 179 (385)
T 3i6e_A 139 PL--SCSIA--------------------NPDFDADIA-------LMERLRAD--GVGLIKLKTGF--------RDHAFD 179 (385)
T ss_dssp EB--EEEEC--------------------CSSHHHHHH-------HHHHHHHH--TCCEEEEECSS--------SCHHHH
T ss_pred EE--EEEcC--------------------CCCHHHHHH-------HHHHHHHc--CCCEEEEecCC--------CCHHHH
Confidence 53 21111 113333322 22333332 31 1112331 234555
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+. |++++- +++.|.+|+ ++.| |.+|-+++. +.+++|+|.+||+|+.
T Consensus 180 ~~~v~-avR~a~--~~~~l~vDa-------n~~~---------------~~~~A~~~~-~~L~~~~i~~iEqP~~ 228 (385)
T 3i6e_A 180 IMRLE-LIARDF--PEFRVRVDY-------NQGL---------------EIDEAVPRV-LDVAQFQPDFIEQPVR 228 (385)
T ss_dssp HHHHH-HHHHHC--TTSEEEEEC-------TTCC---------------CGGGHHHHH-HHHHTTCCSCEECCSC
T ss_pred HHHHH-HHHHhC--CCCeEEEEC-------CCCC---------------CHHHHHHHH-HHHHhcCCCEEECCCC
Confidence 66554 444443 578899995 2223 345555554 4557899999999985
|
| >3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.2e-06 Score=85.33 Aligned_cols=118 Identities=20% Similarity=0.296 Sum_probs=82.2
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.|+..|=|+|.|++|.. -|-+.. .|. .......|++.++|.|+
T Consensus 24 mkIt~v~~~~~--~~~~~~v~V~v~td~G~~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~Li- 79 (425)
T 3vcn_A 24 LKIIDAKVIVT--CPGRNFVTLKITTEDGITGVGDATL---NGR------------------ELSVVSFLQDHMVPSLI- 79 (425)
T ss_dssp CBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TTC------------------HHHHHHHHHHTTHHHHT-
T ss_pred CEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccC---CCC------------------hHHHHHHHHHHHHHHhC-
Confidence 79999998765 345678999999999975 444321 111 12234556777999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...|-+.|...-- .....+...|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 80 -G~dp~~ie~i~~~~~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 142 (425)
T 3vcn_A 80 -GRDAHQIEDIWQFFYRGSY-WRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLG---GACRTGVTV 142 (425)
T ss_dssp -TCBTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSSSSEEE
T ss_pred -CCChhhHHHHHHHHHhhcc-cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeeeE
Confidence 7899998888777754310 00001113689999999999999999999999998 754334543
|
| >3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP} | Back alignment and structure |
|---|
Probab=98.71 E-value=4.5e-07 Score=87.45 Aligned_cols=213 Identities=15% Similarity=0.140 Sum_probs=124.2
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- +|+| ..++=|+|.|++|.. .|-+. .+ ..|.|.+...+..
T Consensus 27 mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~~G~GE~~-----------~~-----~~~~~e~~~~~~~ 90 (393)
T 3u9i_A 27 TTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAA-----------PF-----PAFNGETQDMAHA 90 (393)
T ss_dssp TBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSCEEEEEEC-----------CC-----HHHHSCCHHHHHH
T ss_pred cEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCCEEEEEee-----------CC-----CCcCcCCHHHHHH
Confidence 678888876553 3444 356778999998864 44322 11 1355666777777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.++ .+.|.|+ |.++.+...+-+.|.... .....|+.|+-+|+.-..++..|+|||+.|+ |.. ..+|+
T Consensus 91 ~l~-~l~p~l~--G~d~~~~~~~~~~l~~~~------~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~v~~ 157 (393)
T 3u9i_A 91 AIL-AARSLVE--GADVREWRRIALALPALP------GMTGSARCAIETAILDALTRRARLPLWAFFG---GAA-TSLET 157 (393)
T ss_dssp HHH-HTHHHHT--TSBGGGHHHHHHHGGGST------TCCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEEC
T ss_pred HHH-HHHHHhc--CCCcCCHHHHHHHHHHhc------CccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-CceEE
Confidence 775 5899998 788888777666664321 1235789999999999999999999999998 654 33443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
- .- ++ ..+.++.. .++++.++. |. +-..+|...++.......++-++
T Consensus 158 ~--~t------------------~~--~~~~e~~~-------~~a~~~~~~--Gf~~iKlKvg~~~~~~~~~~~~~~di~ 206 (393)
T 3u9i_A 158 D--VT------------------IT--TGSVTAAA-------RAAQAIVAR--GVTTIKIKIGAGDPDATTIRTMEHDLA 206 (393)
T ss_dssp C--EE------------------EC-----CHHHH-------HHHHHHHTT--TCCEEEEECC-------CHHHHHHHHH
T ss_pred E--EE------------------ec--CCCHHHHH-------HHHHHHHHc--CCCeEEEEeCCCcccccccccHHHHHH
Confidence 1 00 11 11222222 233333332 31 11133332212111122455666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHH-hcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFI-KEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~-~~yPIvsiEDp~~ 298 (299)
.+...-+.. +++.|.+|+ + ..+|.+|-+.+...|- +.|+|.+||+|+.
T Consensus 207 ~v~avR~a~---~d~~L~vDa--------------------N--~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~ 255 (393)
T 3u9i_A 207 RIVAIRDVA---PTARLILDG--------------------N--CGYTAPDALRLLDMLGVHGIVPALFEQPVA 255 (393)
T ss_dssp HHHHHHHHS---TTSEEEEEC--------------------C--SCCCHHHHHHHHHTTTTTTCCCSEEECCSC
T ss_pred HHHHHHHHC---CCCeEEEEc--------------------c--CCCCHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 554433333 467888885 1 2356677777666553 6799999999985
|
| >3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4.4e-07 Score=86.16 Aligned_cols=205 Identities=19% Similarity=0.213 Sum_probs=127.1
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+|. +++=|+|.|++|.. .|-+.. + ..|.|.+...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 64 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGLLGLGAASP-----------E-----RHVTGETLEACHA 64 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSCEEEEEECC-----------C-----HHHHCCCHHHHHH
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCCEEEecccC-----------C-----CCcCcCCHHHHHH
Confidence 89999998765 234553 56889999998864 443321 1 1245566677777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+++.+.|.|+ |.++.+...+-+.|...- ..-..|+.|+.+|+.-+.++..|+|||+.|+ |.. ..+|+
T Consensus 65 ~l~~~l~~~l~--G~~~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~-~~v~~ 132 (356)
T 3ro6_B 65 ALDHDRLGWLM--GRDIRTLPRLCRELAERL------PAAPAARAALDMALHDLVAQCLGLPLVEILG---RAH-DSLPT 132 (356)
T ss_dssp HHCGGGCTTTT--TCBGGGHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHHHTSBHHHHTC---CCC-SCEEB
T ss_pred HHHHHhHHHhc--CCCccCHHHHHHHHHHhh------ccchhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceee
Confidence 88888999998 788888777766664321 0124688999999999999999999999998 642 23443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
..-+ +..+.++.++ +.++.+.. |. +-..+|. ++++-++
T Consensus 133 --~~~~--------------------~~~~~~~~~~-------~a~~~~~~--G~~~~K~K~G~---------~~~~d~~ 172 (356)
T 3ro6_B 133 --SVTI--------------------GIKPVEETLA-------EAREHLAL--GFRVLKVKLCG---------DEEQDFE 172 (356)
T ss_dssp --CEEE--------------------CSCCHHHHHH-------HHHHHHHT--TCCEEEEECCS---------CHHHHHH
T ss_pred --eEEE--------------------cCCCHHHHHH-------HHHHHHHc--CCCEEEEEeCC---------CHHHHHH
Confidence 2111 1123333322 22333331 32 1112331 4577777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++ .+|.++-+++. +.+++|+|.+||+|+.
T Consensus 173 ~v~avR~~~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~-~~l~~~~i~~iEqP~~ 220 (356)
T 3ro6_B 173 RLRRLHETLA--GRAVVRVDP-------NQ---------------SYDRDGLLRLD-RLVQELGIEFIEQPFP 220 (356)
T ss_dssp HHHHHHHHHT--TSSEEEEEC-------TT---------------CCCHHHHHHHH-HHHHHTTCCCEECCSC
T ss_pred HHHHHHHHhC--CCCEEEEeC-------CC---------------CCCHHHHHHHH-HHHHhcCCCEEECCCC
Confidence 7665544445 468888885 12 24556766655 4557799999999985
|
| >3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A | Back alignment and structure |
|---|
Probab=98.70 E-value=7.6e-07 Score=86.26 Aligned_cols=210 Identities=18% Similarity=0.263 Sum_probs=126.0
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|..+.+ ..|-+=|+|.|++|.. -|-+.. .|. ...+.. .++ .++|.|+
T Consensus 2 MkIt~i~~~~~----~~~~~~V~v~td~G~~G~GE~~~---~g~---------------~~~~~~---~i~-~l~p~li- 54 (405)
T 3rr1_A 2 VKITRLTTYRL----PPRWMFLKVETDEGVTGWGEPVI---EGR---------------ARTVEA---AVH-ELSDYLI- 54 (405)
T ss_dssp CCEEEEEEEEE----TTTEEEEEEEETTSCEEEECCCC---TTC---------------HHHHHH---HHH-HHGGGTT-
T ss_pred CeEEEEEEEEE----CCCEEEEEEEECCCCEEEEeCCC---CCC---------------HHHHHH---HHH-HHHHHHC-
Confidence 89999999998 2456899999999875 443322 111 012333 333 3899999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|.|+.+...+-+.|....- .....+...|+.|+-+|+.-..++..|+|||+.|+ |.....+|+ ..-+ |
T Consensus 55 -G~dp~~~e~~~~~l~~~~~-~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~--~--- 122 (405)
T 3rr1_A 55 -GQDPSRINDLWQTMYRAGF-YRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLG---GLVRDKMRT--YSWV--G--- 122 (405)
T ss_dssp -TSCTTCHHHHHHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSCEEE--EEEC--C---
T ss_pred -CCCcccHHHHHHHHHHhhc-ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---ccccCceee--eEeC--C---
Confidence 7899988777777754310 00001113588999999999999999999999998 653334443 3222 1
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcc-cCCC-CCcCCCCCChHHHHHHHHHHHHHcccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATA-VGDE-GGFAPNILDNKEGLRLIVEAIEKAGYT 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~-vgde-Ggfap~~~~~e~aL~ll~eAi~~ag~~ 237 (299)
..+.++..+ ++++.+++ |..... +|.. .++.....+.++.++.+...-+..|
T Consensus 123 ---------------~~~~e~~~~-------~a~~~~~~--G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG-- 176 (405)
T 3rr1_A 123 ---------------GDRPADVIA-------GMKALQAG--GFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFG-- 176 (405)
T ss_dssp ---------------CSSHHHHHH-------HHHHHHHT--TCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTG--
T ss_pred ---------------CCCHHHHHH-------HHHHHHHc--CCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhC--
Confidence 223333322 22333332 421111 3322 2232222345666776655444445
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.|.+|+ ++ .+|.+|-+.+.. .+++|.|.+||+|+.
T Consensus 177 ~d~~L~vDa-------N~---------------~~~~~~A~~~~~-~L~~~~i~~iEeP~~ 214 (405)
T 3rr1_A 177 NTVEFGLDF-------HG---------------RVSAPMAKVLIK-ELEPYRPLFIEEPVL 214 (405)
T ss_dssp GGSEEEEEC-------CS---------------CBCHHHHHHHHH-HHGGGCCSCEECSSC
T ss_pred CCceEEEEC-------CC---------------CCCHHHHHHHHH-HHHhcCCCEEECCCC
Confidence 468888885 12 245677666554 557899999999985
|
| >3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199} | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-06 Score=82.76 Aligned_cols=210 Identities=20% Similarity=0.177 Sum_probs=124.8
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. +.+=|+|.|++|.. .|-+.. . . .+....+.
T Consensus 28 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~--------~-~~~~~~~~ 87 (390)
T 3ugv_A 28 LTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGVPGRAYLEP-----------Y--------V-PKAMKYLV 87 (390)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCCEEEEECC-----------S--------C-GGGHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCCEEEEEeec-----------C--------C-CchHHHHH
Confidence 78999988765 355664 56889999998864 443221 1 0 01234455
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.+.+.+.|.|+ |.++.+. .+-+.|... .-..+. .+...|+.|+-+|+.-+.|+..|+|||+.|+ |.. . +
T Consensus 88 ~~~~~l~p~li--G~d~~~~-~~~~~l~~~~~~~g~~-g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~--~ 157 (390)
T 3ugv_A 88 PALHDMSDMLA--GQPLAPA-EIYDKTRKSLHFVGYA-GLSMIAASGVDMAVWDALARAANMPLCTLLG---GTP-G--S 157 (390)
T ss_dssp HHHHHHHHHHT--TSBCCHH-HHHHHHHHHTGGGCSS-THHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCC-C--E
T ss_pred HHHHHHHHHHC--CCCcchH-HHHHHHHHHHHhhCCc-chHHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCC-C--c
Confidence 66678999999 7888887 666665432 100110 0113689999999999999999999999998 643 2 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc--CC--CCcccCCCCCcCCCCCChHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKF--GL--DATAVGDEGGFAPNILDNKE 222 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~--G~--~~t~vgdeGgfap~~~~~e~ 222 (299)
+|....+ |+-. ..+.++.++ ++++.+.. + |. +-..+|. .++++
T Consensus 158 v~~y~s~-g~~~----------------~~~~e~~~~-------~a~~~~~~-~~~G~~~iKlKvG~--------~~~~~ 204 (390)
T 3ugv_A 158 VKAYNSN-GLWL----------------KSPAEVAAE-------AVELKAEG-QGTGFKGLKLRMGR--------DDPAV 204 (390)
T ss_dssp EEEEECS-CCCS----------------SCHHHHHHH-------HHHHHHTT-CTTCCSEEEEECCC--------SSHHH
T ss_pred eEEEEec-cccc----------------CCCHHHHHH-------HHHHHHHh-hhCCCcEEEEecCC--------CCHHH
Confidence 4433222 1100 123333322 23333331 1 31 1112331 24566
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
-++.+...-+..| .++.|.+|+ ++ .+|.+|-+++.. .+++|+|.+||+|+.
T Consensus 205 d~~~v~avR~a~G--~~~~l~vDa-------N~---------------~~~~~~A~~~~~-~l~~~~i~~iEqP~~ 255 (390)
T 3ugv_A 205 DIETAEAVWDAVG--RDTALMVDF-------NQ---------------GLDMAEAMHRTR-QIDDLGLEWIEEPVV 255 (390)
T ss_dssp HHHHHHHHHHHHC--TTSEEEEEC-------TT---------------CCCHHHHHHHHH-HHTTSCCSEEECCSC
T ss_pred HHHHHHHHHHHhC--CCCEEEEEC-------CC---------------CCCHHHHHHHHH-HHHhhCCCEEECCCC
Confidence 6776655444455 468888885 12 245567666555 457899999999985
|
| >1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-06 Score=81.95 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=91.4
Q ss_pred cHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 61 gv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
........++ .+.|.|+. |.++ ..+++++ + ..+++.|+++|++.+.|+..|+|||++|+ |.
T Consensus 57 ~~~~~~~~i~-~~~~~l~~-~~~~---~~~~~~~------~-----~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~ 117 (324)
T 1jpd_X 57 SDASVMAQIM-SVVPQLEK-GLTR---EELQKIL------P-----AGAARNALDCALWDLAARRQQQSLADLIG---IT 117 (324)
T ss_dssp CHHHHHHHHH-TTHHHHHT-TCCH---HHHHHHS------C-----SSHHHHHHHHHHHHHHHHTTTCCHHHHHT---CC
T ss_pred CHHHHHHHHH-HHHHHHhc-CCCH---HHHHHhC------c-----cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 3344455555 47788852 5544 3454442 1 35899999999999999999999999998 64
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCC
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNIL 218 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~ 218 (299)
. ...|+|.+++ ++| +.++.++ .+++.+.+ |. +-..+|+ +
T Consensus 118 ~-~~~~~~~~~~-~~~--------------------~~e~~~~-------~a~~~~~~--G~~~~KiKvg~--------~ 158 (324)
T 1jpd_X 118 L-PETVITAQTV-VIG--------------------TPDQMAN-------SASTLWQA--GAKLLKVKLDN--------H 158 (324)
T ss_dssp C-CSEEEBCEEE-CSC--------------------CHHHHHH-------HHHHHHHT--TCSEEEEECCS--------S
T ss_pred C-CCCcceeEEe-eCC--------------------CHHHHHH-------HHHHHHHc--CCCEEEEEeCC--------c
Confidence 3 2467777764 222 2222221 22233221 31 1112342 1
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++. .+||+++- +++.|.+|+ ++.|. .+|.+++. +.+++|+|.+||||+.
T Consensus 159 ---~d~~~-v~avr~~~--~~~~l~vDa-------N~~~~---------------~~~a~~~~-~~l~~~~i~~iEqP~~ 209 (324)
T 1jpd_X 159 ---LISER-MVAIRTAV--PDATLIVDA-------NESWR---------------AEGLAARC-QLLADLGVAMLEQPLP 209 (324)
T ss_dssp ---CHHHH-HHHHHHHC--TTSEEEEEC-------TTCCC---------------STTHHHHH-HHHHHTTCCEEECCSC
T ss_pred ---hHHHH-HHHHHHhC--CCCEEEEEC-------cCCCC---------------HHHHHHHH-HHHHhCCCCEEECCCC
Confidence 23443 34566653 589999997 23343 35666654 4678899999999986
|
| >3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=98.70 E-value=1e-06 Score=84.32 Aligned_cols=203 Identities=19% Similarity=0.228 Sum_probs=124.3
Q ss_pred CceeeEEEeEEe--------CCCCC------eeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN------PTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~------pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+= .|+|. .++=|+|.|++|.. .|-+ |.|. .|.+.+...
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~----------------~~~~~~~~~ 66 (378)
T 3eez_A 3 LKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWGH----------------TYVPAHGPG 66 (378)
T ss_dssp CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCCCEEEEECCSCS----------------SSSSCCHHH
T ss_pred cEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCCEEEecccCCCC----------------ccCCCcHHH
Confidence 789999988763 25563 56888999999865 4432 2211 244434455
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
+...++ .++|.|+ |.++.+...+-+.|.. +.| ...|+.|+-+|+.-..|+..|+|||+.|+ |....
T Consensus 67 ~~~~l~-~l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~~r~ 133 (378)
T 3eez_A 67 IRAGIE-TMAPFVL--GLDPRRLLDVERAMDIALPG-------HLYAKSPIDMACWDIAGQAAGLPIADLMG---GGSRT 133 (378)
T ss_dssp HHHHHH-HHHHHHT--TSCTTCHHHHHHHHHHHSSS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCCCS
T ss_pred HHHHHH-HHHHHhc--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCC
Confidence 555564 4899998 7899998888777754 322 23688999999999999999999999998 65433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+ ..-+ +..+..+..+ ++++.++ .|. +-..+|. +++
T Consensus 134 ~v~~--~~~~--------------------~~~~~e~~~~-------~a~~~~~--~G~~~iKiK~G~---------~~~ 173 (378)
T 3eez_A 134 PRPI--ASSV--------------------GAKSVEETRA-------VIDRYRQ--RGYVAHSVKIGG---------DVE 173 (378)
T ss_dssp CEEB--BCCB--------------------CSCCHHHHHH-------HHHHHHH--TTCCEEEEECCS---------CHH
T ss_pred eEEE--EEEe--------------------cCCCHHHHHH-------HHHHHHh--CCCCEEEeccCC---------CHH
Confidence 4544 1111 1123333322 2233332 232 1113331 467
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++.+...-+..| .++.|.+|+ ++ .+|.+|.+++.. .+++|++ +||+|+.
T Consensus 174 ~d~~~v~avR~a~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~~-~l~~~~i-~iEqP~~ 224 (378)
T 3eez_A 174 RDIARIRDVEDIRE--PGEIVLYDV-------NR---------------GWTRQQALRVMR-ATEDLHV-MFEQPGE 224 (378)
T ss_dssp HHHHHHHHHTTSCC--TTCEEEEEC-------TT---------------CCCHHHHHHHHH-HTGGGTC-CEECCSS
T ss_pred HHHHHHHHHHHHcC--CCceEEEEC-------CC---------------CCCHHHHHHHHH-HhccCCe-EEecCCC
Confidence 77777664333344 468888885 11 245567666555 4578999 9999984
|
| >3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.1e-06 Score=82.65 Aligned_cols=110 Identities=13% Similarity=0.186 Sum_probs=78.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. .++=|+|.|++|.. .|-+ ..+ ..|.|.+...+..
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~-----------~~~-----~~~~~e~~~~~~~ 68 (389)
T 3s5s_A 5 TLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGTLGFGEA-----------APL-----PAFNGETQDGSRA 68 (389)
T ss_dssp TBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEE-----------CCC-----HHHHSCCHHHHHH
T ss_pred CEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCCEEEEec-----------cCC-----CCcCccCHHHHHH
Confidence 67888876543 345553 46778888888864 3332 211 1355666666677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.++ .+.|.|+ |.++.+...+-+.|... .+ .+..|+.|+-+|+.-..++..|+|||+.|+
T Consensus 69 ~l~-~l~~~l~--G~d~~~~~~~~~~l~~~~~~------~~~~A~said~ALwDl~gk~~g~Pl~~LLG 128 (389)
T 3s5s_A 69 AAV-SLREAVV--GSDARAWRAVARALREASGG------GAGAARCAIETAILDALTKRAGMPLWAFFG 128 (389)
T ss_dssp HHH-HTHHHHT--TSBGGGHHHHHHHHHHHHTT------CCHHHHHHHHHHHHHHHHHTTTCBHHHHTT
T ss_pred HHH-HHHHHhc--CCCccCHHHHHHHHHHhhcc------ChHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 775 5899998 78998887777766543 22 123799999999999999999999999998
|
| >3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-06 Score=82.83 Aligned_cols=204 Identities=17% Similarity=0.188 Sum_probs=127.5
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+| ..++=|+|.|++|.. .|-+.. + ..|.|.+...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 64 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGHIGYGECSP-----------F-----MTIHGESMDTAFI 64 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCEEEEEECC-----------C-----HHHHSCCHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCCEEEeeccC-----------C-----CCcCCCCHHHHHH
Confidence 88999988765 23455 356788899988865 443221 1 1244555555565
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc-c
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL-P 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l-P 146 (299)
.++ .+.|.|+ |.++.+...+-+.|...-. -...|+.|+-+|+.-..|+..|+|||+.|+ |... .+ |
T Consensus 65 ~~~-~l~~~l~--G~d~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~-~v~~ 131 (368)
T 3q45_A 65 VGQ-YLAKGLI--GTSCLDIVSNSLLMDAIIY------GNSCIKSAFNIALYDLAAQHAGLPLYAFLG---GKKD-KIIQ 131 (368)
T ss_dssp HHH-HHHHHHT--TSBTTCHHHHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCCC-SCEE
T ss_pred HHH-HHHHHhc--CCChhhHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCC-eeee
Confidence 554 6999998 7889888777766654311 123689999999999999999999999998 6532 33 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
+ -.. + +..+.++..+ +.++.+.. |. +-..+|. ++++-+
T Consensus 132 ~--~~~------------------~--~~~~~e~~~~-------~a~~~~~~--G~~~~K~KvG~---------~~~~d~ 171 (368)
T 3q45_A 132 T--DYT------------------V--SIDEPHKMAA-------DAVQIKKN--GFEIIKVKVGG---------SKELDV 171 (368)
T ss_dssp B--CEE------------------E--CSCCHHHHHH-------HHHHHHHT--TCSEEEEECCS---------CHHHHH
T ss_pred e--EEE------------------e--cCCCHHHHHH-------HHHHHHHc--CCCeEEEEecC---------CHHHHH
Confidence 2 100 1 1234433333 22333332 32 1112331 356777
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++. +|.+|.+++...| ++|+|.+||+|+.
T Consensus 172 ~~v~avR~~~g--~~~~l~vDa-------N~~---------------~~~~~A~~~~~~l-~~~~i~~iEqP~~ 220 (368)
T 3q45_A 172 ERIRMIREAAG--DSITLRIDA-------NQG---------------WSVETAIETLTLL-EPYNIQHCEEPVS 220 (368)
T ss_dssp HHHHHHHHHHC--SSSEEEEEC-------TTC---------------BCHHHHHHHHHHH-GGGCCSCEECCBC
T ss_pred HHHHHHHHHhC--CCCeEEEEC-------CCC---------------CChHHHHHHHHHH-hhcCCCEEECCCC
Confidence 77765555556 468888884 122 4567777665544 7799999999985
|
| >3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.9e-06 Score=83.18 Aligned_cols=111 Identities=20% Similarity=0.269 Sum_probs=84.5
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+= .|+| ..++=|+|.| +|.. .|-+.. +.. ..|.|..+..+..
T Consensus 7 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t-~G~~G~GE~~~-----------~~~---p~~~~et~~~~~~ 71 (400)
T 3mwc_A 7 ARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIRE-GDLFGYGESAP-----------FEE---PFYLGETLETTKV 71 (400)
T ss_dssp CCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEE-TTEEEEEEECC-----------BSS---TTSTTCBHHHHHH
T ss_pred cEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEE-CCeEEEEeccc-----------CCC---CccccCcHHHHHH
Confidence 789999888762 3444 3568899999 8864 443321 110 1477778888888
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.++|.|+ |.|+.+...+-+.|.. +.| +.-|+.|+-+|+.-+.|+..|+|||+.|+
T Consensus 72 ~i~~~l~p~li--G~d~~~~e~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LLG 131 (400)
T 3mwc_A 72 ILKNHLLPMIL--GKEPLSIEEFNHLIKNGIRG-------NHFARCGVENAYWDLIAKKNKISLKAMIE 131 (400)
T ss_dssp HHHHTHHHHHT--TCCCSSHHHHHHHHHHSCCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred HHHHHHHHHHc--CCCCCCHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 89989999999 7899998888888765 222 23489999999999999999999999998
|
| >3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.4e-06 Score=83.76 Aligned_cols=112 Identities=17% Similarity=0.250 Sum_probs=82.4
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+|. .++=|+|.|++|.. .|-+.. +.. ..|.+..+..+..
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~~~---p~~~~e~~~~~~~ 66 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGIEGWSECVA-----------LAE---PTYTEECTDTAWV 66 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEECC-----------CSS---TTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCCEEEEeccc-----------CCC---CccccccHHHHHH
Confidence 78999988765 356664 56778999998865 443221 100 1466777888888
Q ss_pred HHHHhHHHHHh-------cCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALL-------KESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li-------~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.+.|.|+ | .++.+...+.+.|..+.| ...|+.|+.+|+.-..++..|+|||+.|+
T Consensus 67 ~l~~~l~p~l~~~~~~~~G--~~~~~~~~~~~~~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LLG 132 (388)
T 3qld_A 67 MLVHHLVPRFARWLRAASQ--DQDVDPRTVCEALRDVRG-------NRMSVAAIEMAVWDWYAARTGQPLVGLLG 132 (388)
T ss_dssp HHHHTHHHHHHHHHTSGGG--SSCCCGGGGGGGGTTCCS-------CHHHHHHHHHHHHHHHHHHHTCCHHHHTT
T ss_pred HHHHHHHHHHhhhhcccCC--CCccCHHHHHHHHHHccC-------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 89999999998 6 466777777766644432 34688999999999999999999999998
|
| >4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A | Back alignment and structure |
|---|
Probab=98.63 E-value=3.4e-06 Score=81.47 Aligned_cols=210 Identities=17% Similarity=0.145 Sum_probs=123.0
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. .++=|+|.|++|.. .|-+..| ..+..+
T Consensus 24 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~g---------------------~~~~~~-- 80 (398)
T 4dye_A 24 MKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVEGWGETMWG---------------------APVAAI-- 80 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS---------------------HHHHHH--
T ss_pred ceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCCEEEEeecCc---------------------hHHHHH--
Confidence 78999988766 346664 45789999999875 5544321 113333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
+ +.++|.|+ |.++.+...+-+.|.... -...+.|..|+.|+-+|+.-..|+..|+|||+.|+ |.....+|+
T Consensus 81 -i-~~l~p~li--G~d~~~~~~~~~~l~~~~--~~~g~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~ 151 (398)
T 4dye_A 81 -V-RRMAPDLI--GTSPFALEAFHRKQHMVP--FFYGYLGYAAIAAVDVACWDAMGKATGQSVTDLLG---GAVRDEVPI 151 (398)
T ss_dssp -H-HHHHHHHT--TCCTTCHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEB
T ss_pred -H-HHHHHHHc--CCCccCHHHHHHHHHhhh--hhhccccHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCcCCeEEE
Confidence 3 56899998 788988877776663210 00002355899999999999999999999999998 654344554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
=. +++.... ++ . ....+.++..+ ++++.+++ +|. +-..+| .++++-++
T Consensus 152 y~-s~~~~~~--~g-~---------~~~~~~e~~~~-------~a~~~~~~-~G~~~~K~KvG---------~~~~~d~~ 201 (398)
T 4dye_A 152 TA-LITRADA--PG-A---------TPADLPKAMAE-------HAVRVVEE-GGFDAVKLKGT---------TDCAGDVA 201 (398)
T ss_dssp EE-EECGGGS--TT-C---------CTTTHHHHHHH-------HHHHHHHH-HCCSEEEEECC---------SCHHHHHH
T ss_pred EE-EEecccc--CC-c---------ccCCCHHHHHH-------HHHHHHHh-cCCCEEEEecC---------CCHHHHHH
Confidence 22 2222110 00 0 00112222222 22333332 131 111233 13466666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+.. ++++= +++.|.+|+ ++ .+|.+|-+.+.. .+++|+|.+||+|+.
T Consensus 202 ~v~a-vR~~~--~~~~l~vDa-------N~---------------~w~~~~A~~~~~-~l~~~~i~~iEqP~~ 248 (398)
T 4dye_A 202 ILRA-VREAL--PGVNLRVDP-------NA---------------AWSVPDSVRAGI-ALEELDLEYLEDPCV 248 (398)
T ss_dssp HHHH-HHHHC--TTSEEEEEC-------TT---------------CSCHHHHHHHHH-HHGGGCCSEEECCSS
T ss_pred HHHH-HHHhC--CCCeEEeeC-------CC---------------CCCHHHHHHHHH-HHhhcCCCEEcCCCC
Confidence 5543 44432 578899995 11 245667666554 557899999999984
|
| >3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.9e-06 Score=83.05 Aligned_cols=104 Identities=22% Similarity=0.352 Sum_probs=74.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|..... .+.+=|+|.|++|.. -|-++. |.+ ......+.+.++|.|+
T Consensus 23 mkIt~v~~~~~-----~~~~~V~v~Td~G~~G~GE~~~-------------------~~~---~~~~~~i~~~l~p~Li- 74 (388)
T 3tcs_A 23 MKLKAIETFTN-----DAVGFVRVTTQDGAQGWGQVST-------------------YHA---DITCTVLHRQVAPWML- 74 (388)
T ss_dssp CBEEEEEEEEC-----SSCEEEEEEETTSCEEEEECCS-------------------SSH---HHHHHHHHHHTHHHHT-
T ss_pred cEEEEEEEEEe-----CCeEEEEEEECCCCEEEEeccC-------------------Ccc---HHHHHHHHHHHHHHhC-
Confidence 78888886542 356789999999975 444321 111 1223456778999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCC----hhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGA----NAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS 141 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGa----NailavSlA~akAaA~~~~~pLy~yi~~l~g~~ 141 (299)
|.|+.+...+-+.|....- ..++ .|+.|+-+|+.=..|+..|+|||+.|+ |..
T Consensus 75 -G~d~~~~e~l~~~~~~~~~-----~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---g~~ 131 (388)
T 3tcs_A 75 -GQDITDLDDLLDIVTEREH-----KFPGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLG---GTP 131 (388)
T ss_dssp -TSBCTTHHHHHHHHHHHTT-----TCCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC
T ss_pred -CCCcccHHHHHHHHHHhhh-----ccCCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhC---CCC
Confidence 7899998888777753210 1222 488999999999999999999999999 753
|
| >4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=2.2e-06 Score=83.52 Aligned_cols=115 Identities=24% Similarity=0.340 Sum_probs=81.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ ..+++.|=|+|.|++|.. -|-+.. +| .. ......|++.++|.|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~---~g-----------------~~-~~~~~~l~~~l~p~Li- 78 (426)
T 4e4f_A 23 MKIVSAEVFVT--CPGRNFVTLKITTDSGLTGLGDATL---NG-----------------RE-LPVASYLNDHVCPQLI- 78 (426)
T ss_dssp CBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TT-----------------CH-HHHHHHHHHTHHHHHT-
T ss_pred cEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEeccc---CC-----------------Cc-HHHHHHHHHHHHHHHc-
Confidence 88999998755 335678999999999975 544321 01 11 1234557778999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCC---ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFG---ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lG---aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|...- .-+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 79 -G~dp~~ie~i~~~l~~~~----~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 141 (426)
T 4e4f_A 79 -GRDAHQIEDIWQYFYKGA----YWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLG---GASRTGVMV 141 (426)
T ss_dssp -TSBTTCHHHHHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEE
T ss_pred -CCChhhHHHHHHHHHhhc----cccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceeE
Confidence 789999888877775421 01112 2588999999999999999999999999 754334443
|
| >1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.2e-06 Score=83.51 Aligned_cols=209 Identities=18% Similarity=0.196 Sum_probs=128.2
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|+.+.+= .|+| ...+=|+|. ++|.. |--|+..+. . ..|.+.+...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~----------G~GE~~~~~--~-~~~~~e~~~~~~~~ 66 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGLV----------GVGEGGSVG--G-PVWSAECAETIKII 66 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSCB----------CCEECCCBT--T-BTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCcE----------EEEccccCC--C-CCCCCCCHHHHHHH
Confidence 788888887662 2333 345667777 77753 333432221 1 13666777888888
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|++.++|.|+ |.++.+...+-+.|... .| ...|+.|+-+|+.-..++..|+|||+.|+ |.....+|+
T Consensus 67 i~~~l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~ 134 (370)
T 1chr_A 67 VERYLAPHLL--GTDAFNVSGALQTMARAVTG-------NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSAIPI 134 (370)
T ss_dssp HHHHTHHHHT--TSCTTCHHHHHHHHHHHCSS-------CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEB
T ss_pred HHHHHHHHHc--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeE
Confidence 8888999999 78999988887766543 22 23688999999999999999999999998 654445554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~aL~ 225 (299)
...+..| +..+.++ +..+.+.+ .|.. -..+|. .++++-++
T Consensus 135 --~~t~~~~--------------------~~~~~~~-------~~~~~~~~-~G~~~~KiKvg~--------~~~~~d~~ 176 (370)
T 1chr_A 135 --AWTLASG--------------------DTKRDLD-------SAVEMIER-RRHNRFKVKLGF--------RSPQDDLI 176 (370)
T ss_dssp --EEEECSS--------------------SHHHHHH-------HHHHHHHT-TCCCEEEEECSS--------SCSHHHHH
T ss_pred --EEEecCC--------------------CcHHHHH-------HHHHHHHH-CCCCEEEEecCC--------CCHHHHHH
Confidence 2112111 1122221 22233331 2321 112331 24567777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++.| |.+|-+.+ .+.+++|+|.+||+|+.
T Consensus 177 ~v~avR~~~g--~~~~l~vDa-------n~~~---------------~~~~a~~~-~~~l~~~~i~~iEqP~~ 224 (370)
T 1chr_A 177 HMEALSNSLG--SKAYLRVDV-------NQAW---------------DEQVASVY-IPELEALGVELIEQPVG 224 (370)
T ss_dssp HHHHHHHHSS--TTCCEEEEC-------TTCC---------------CTTHHHHH-THHHHTTTEEEEECCSC
T ss_pred HHHHHHHhcC--CCCEEEEEC-------CCCC---------------CHHHHHHH-HHHHHhcCCCEEECCCC
Confidence 7655444445 457788885 2233 33454444 45667899999999985
|
| >3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.1e-05 Score=77.72 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=127.3
Q ss_pred CceeeEEEeEEeC---CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH-----HHH
Q psy12655 1 MPISKIHARQIFD---SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF-----INN 71 (299)
Q Consensus 1 ~~I~~v~ar~ilD---srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~-----in~ 71 (299)
|+|++|..+.+-- ....++|=|+|.|++|.. -|-+... .+ .+..+++. +.+
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~-----~~---------------~~~~~~~~~~~~~~~~ 64 (394)
T 3mqt_A 5 ANIVSVEFIPVNVAATNWSENTVIVKVTDENGVYGLGEADGP-----PE---------------CMKAFSEIENEHKWLN 64 (394)
T ss_dssp CCEEEEEEEEEECC-----CEEEEEEEEETTSCEEEEEECSC-----HH---------------HHHHHHTCCCCBTTBC
T ss_pred CeEeEEEEEEEecCCCCCCccEEEEEEEECCCCEEEEEECCc-----HH---------------HHHHHHhcccchhhHH
Confidence 7899999988731 234678999999999975 4443210 00 01111111 233
Q ss_pred hHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccce
Q psy12655 72 DIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPA 149 (299)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~ 149 (299)
.++|.|+ |.|+.+...+-+.|.... ....+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+| .
T Consensus 65 ~l~p~li--G~dp~~~e~~~~~l~~~~--~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~--~ 135 (394)
T 3mqt_A 65 NIKEAVI--GRDPLEFRANYNRMYDTT--KWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMG---GAQKAQLT--P 135 (394)
T ss_dssp CGGGGTT--TSCTTCHHHHHHHHHHHT--TTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSSBC--C
T ss_pred HHHHHhC--CCChhHHHHHHHHHHHhh--hhhCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCCCCeEE--E
Confidence 5899999 789999888777775531 1111112 3578999999999999999999999999 75433444 3
Q ss_pred EEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc---ccCCCCCcCCCCCChHHHHHH
Q psy12655 150 FNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT---AVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 150 ~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t---~vgdeGgfap~~~~~e~aL~l 226 (299)
..-+.+. ++ ...+..+.++ ++-...++.++ .|.... .+|.. ..+.++.++.
T Consensus 136 y~s~~~~--------------~~-~~~~~~~~i~---~~~~~a~~~~~--~G~~~~K~~k~g~~------~~~~~~d~~~ 189 (394)
T 3mqt_A 136 YFTLYPS--------------VA-ADATLSEIVE---AYKPLIAKAKE--RGAKAVKVCIIPND------KVSDKEIVAY 189 (394)
T ss_dssp EEECCCC--------------CC-TTCCHHHHHH---HHHHHHHHHHH--TTCSEEEEECCCCT------TSCHHHHHHH
T ss_pred EEEecCC--------------CC-CCcchhhhHH---HHHHHHHHHHH--cCCCEEEecccCCC------ccCHHHHHHH
Confidence 3222110 01 1123343332 11123333333 242111 23311 1356777777
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCcc-CHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWL-PADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~-t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| .++.|.+|+- + .+ |.+|-+.+.. .+++|.|.+||+|+.
T Consensus 190 v~avR~a~G--~d~~l~vDan-------~---------------~~~~~~~A~~~~~-~L~~~~i~~iEeP~~ 237 (394)
T 3mqt_A 190 LRELREVIG--WDMDMMVDCL-------Y---------------RWTDWQKARWTFR-QLEDIDLYFIEACLQ 237 (394)
T ss_dssp HHHHHHHHC--SSSEEEEECT-------T---------------CCSCHHHHHHHHH-HTGGGCCSEEESCSC
T ss_pred HHHHHHHhC--CCCeEEEECC-------C---------------CCCCHHHHHHHHH-HHhhcCCeEEECCCC
Confidence 765555556 4678888851 1 24 5677666554 557899999999985
|
| >3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified} | Back alignment and structure |
|---|
Probab=98.55 E-value=3.7e-06 Score=81.44 Aligned_cols=115 Identities=18% Similarity=0.212 Sum_probs=78.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ + .+...|=|+|.|++|.. -|-+. +++ ......|.+.++|.|+
T Consensus 4 mkIt~v~~~~~-~-~~~~~~~V~v~td~G~~G~GE~~--------------------~~~---~~~~~~i~~~l~p~li- 57 (410)
T 3dip_A 4 PRITALRTIRL-P-ERPKLIWVEVETEDGLTGLGETF--------------------RGA---QAVEAVLHEQTAPAII- 57 (410)
T ss_dssp CBEEEEEEEEE-T-TEEEEEEEEEEETTSCEEEEEEE--------------------SCH---HHHHHHHHHTHHHHHT-
T ss_pred CeEEEEEEEEE-C-CCCCEEEEEEEECCCCEEEEeCC--------------------CCh---HHHHHHHHHHHHHHhc-
Confidence 78999998765 4 34678899999999864 33311 111 1233455667999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|... ......-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 58 -G~dp~~~e~~~~~~~~~--~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 121 (410)
T 3dip_A 58 -GRAAENITSISSELLNP--YVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALG---GAARDRVPV 121 (410)
T ss_dssp -TSBTTCHHHHHHHHTCC--SSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE
T ss_pred -CCCcchHHHHHHHHHHH--HHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCcCCceeE
Confidence 78898877766666431 10111111 2578999999999999999999999999 754344554
|
| >4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} | Back alignment and structure |
|---|
Probab=98.54 E-value=6.6e-06 Score=79.23 Aligned_cols=205 Identities=19% Similarity=0.219 Sum_probs=124.3
Q ss_pred CceeeEEEeEEe---------CCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF---------DSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il---------DsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|..+.+= .|+| ..++=|+|.|++|.. .|-+ |.|. .|++.....+
T Consensus 23 MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~~G~GE~~~~~~----------------~~~~~~~~~~ 86 (391)
T 4e8g_A 23 MKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGLAGWGETCPVGP----------------TYAPSHALGA 86 (391)
T ss_dssp CCEEEEEEEEEEC---------------CCEEEEEEEEETTSCEEEEEECCSST----------------TTSSCCHHHH
T ss_pred CEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCCEEEecCcCCCC----------------ccCCccHHHH
Confidence 789999987663 2334 356889999999875 4433 2211 2443334455
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNII 144 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~ 144 (299)
...+++ +.|.|+ |.++.+...+-+.|... .| ...|+.|+-+|+.-..|+..|+|||+.|+ |.....
T Consensus 87 ~~~l~~-l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~ 153 (391)
T 4e8g_A 87 RAALAE-MAPGLI--GANPLQPLVLRRRMDGLLCG-------HNYAKAAIDIAAYDLMGKHYGVRVADLLG---GVAAER 153 (391)
T ss_dssp HHHHHH-HGGGGT--TCCTTCHHHHHHHHHTTCSS-------CHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSE
T ss_pred HHHHHH-HHHHHC--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCChHHHhcC---CCCCCc
Confidence 555655 899998 78998887777766442 11 13689999999999999999999999998 654334
Q ss_pred cccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHH
Q psy12655 145 LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKE 222 (299)
Q Consensus 145 lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~ 222 (299)
+|+ ..-+ +..+.++..+ ++++.++. |.. -..+|. .++++
T Consensus 154 v~~--y~s~--------------------~~~~~e~~~~-------~a~~~~~~--G~~~~KlKvg~--------~~~~~ 194 (391)
T 4e8g_A 154 VPS--YYAT--------------------GIGQPDEIAR-------IAAEKVAE--GFPRLQIKIGG--------RPVEI 194 (391)
T ss_dssp EEC--CEEE--------------------CSCCHHHHHH-------HHHHHHHT--TCSEEEEECCS--------SCHHH
T ss_pred EEE--eEEc--------------------CCCCHHHHHH-------HHHHHHHc--CCcEEEEcCCC--------CCHHH
Confidence 544 2111 1123433333 22333332 321 112331 14567
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
-++.+...-+..| .+++.|.+|+ + ..+|.++-+.+. +.+++|++ +||+|++
T Consensus 195 d~~~v~avR~a~g-g~~~~L~vDa-------N---------------~~w~~~~A~~~~-~~L~~~~i-~iEeP~~ 245 (391)
T 4e8g_A 195 DIETVRKVWERIR-GTGTRLAVDG-------N---------------RSLPSRDALRLS-RECPEIPF-VLEQPCN 245 (391)
T ss_dssp HHHHHHHHHHHHT-TTTCEEEEEC-------T---------------TCCCHHHHHHHH-HHCTTSCE-EEESCSS
T ss_pred HHHHHHHHHHHhC-CCCCeEEEeC-------C---------------CCCCHHHHHHHH-HHHhhcCe-EEecCCc
Confidence 7776655445554 1357888886 1 124556665554 45578999 9999974
|
| >3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.54 E-value=6.4e-06 Score=79.29 Aligned_cols=204 Identities=18% Similarity=0.224 Sum_probs=121.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+= +|+| .+.+=|+|.|++|.. .|-+.+. ..+. |..+..+
T Consensus 10 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~-~~~~---------------~~~~~~~-- 71 (392)
T 3ddm_A 10 ITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAVGWGEVWCN-FPAC---------------GAEHRAR-- 71 (392)
T ss_dssp BCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCEEEEECCCC-SSTT---------------HHHHHHH--
T ss_pred CEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCCEEEEEeccC-CCCC---------------chHHHHH--
Confidence 689999887663 2333 357889999999875 5544110 0010 1112222
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-------cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-------DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-------DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
.+++.++|.|+ |.|+.+...+-+.|... .| +. -.-..|+.|+-+|+.-+.|+..|+|||+.|+ |.
T Consensus 72 ~i~~~l~p~li--G~d~~~~~~~~~~l~~~~~~~~~~~g--~~-g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~ 143 (392)
T 3ddm_A 72 LVETVLAPLLT--ARAFADPAQAFAHLEARTAVLAIQTG--EP-GPLAQAIAGLDIALCDLAARRAGQPLWAWLG---GS 143 (392)
T ss_dssp HHHHTHHHHHT--TSCBSSHHHHHHHHHHTTHHHHHHHT--CH-HHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CS
T ss_pred HHHHHHHHHhC--CCCcCCHHHHHHHHHhhhhhhhhhcC--Cc-chHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 35778999999 78999988877776543 11 10 0113688999999999999999999999998 65
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCC
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNIL 218 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~ 218 (299)
. ..+| .... |. -| ..+.+..+ +.++. |. +-..+|.
T Consensus 144 ~-~~v~--~y~~--g~--------------~~---e~~~~~a~----------~~~~~--G~~~iKlK~g~--------- 180 (392)
T 3ddm_A 144 G-DRIG--VYAS--GI--------------NP---ENPEDVVA----------RKAAE--GYRAFKLKVGF--------- 180 (392)
T ss_dssp C-CEEE--EEEE--EE--------------CS---SSHHHHHH----------HHHHH--TCCCEEEECSS---------
T ss_pred C-Ccee--EEee--cC--------------CH---HHHHHHHH----------HHHHc--CCCEEEEecCC---------
Confidence 4 3444 3332 21 02 23333322 22221 31 1112331
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++++.++.+...-+..| .++.|.+|+ ++ .+|.+|-+.+ .+.+++|+|.+||+|+.
T Consensus 181 ~~~~d~~~v~avR~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~-~~~L~~~~i~~iEeP~~ 235 (392)
T 3ddm_A 181 DDARDVRNALHVRELLG--AATPLMADA-------NQ---------------GWDLPRARQM-AQRLGPAQLDWLEEPLR 235 (392)
T ss_dssp CHHHHHHHHHHHHHHHC--SSSCEEEEC-------TT---------------CCCHHHHHHH-HHHHGGGCCSEEECCSC
T ss_pred CHHHHHHHHHHHHHhcC--CCceEEEeC-------CC---------------CCCHHHHHHH-HHHHHHhCCCEEECCCC
Confidence 45677776655444446 467788885 12 2455665554 45667899999999985
|
| >3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=6.1e-06 Score=80.98 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=80.5
Q ss_pred CceeeEEEeEEe-------CCCC-----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF-------DSRG-----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il-------DsrG-----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.|- ++.| ...+=|+|.|++|.. -|-++ ++.++..+
T Consensus 28 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~---------------------g~~~~~~~-- 84 (445)
T 3vdg_A 28 IRITGARVTPVAFADPPLLNTVGVHQPYALRAVIQLDTDAGLTGLGETY---------------------ADTVHLER-- 84 (445)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEC---------------------CCHHHHHH--
T ss_pred CEEEEEEEEEEecCCccccccccccccceeEEEEEEEECCCCeEEEeCC---------------------ChHHHHHH--
Confidence 789999998873 3333 234679999999875 44432 11124333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCC---CcccCC--------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTE---NKSKFG--------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~---nks~lG--------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
|+ .++|.|+ |.|+.+...+-+.|...- +.. +...-| ..|+.|+-+|+.=..++..|+|||+.|+
T Consensus 85 -i~-~l~p~Li--G~d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG 160 (445)
T 3vdg_A 85 -LQ-AAAHAIV--GRSVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLG 160 (445)
T ss_dssp -HH-HHHHHHT--TCBTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT
T ss_pred -HH-HHHHHhC--CCChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 33 5899999 789999988888876642 110 011112 2589999999999999999999999998
Q ss_pred hhhCCCcccccc
Q psy12655 136 DLAGNSNIILPV 147 (299)
Q Consensus 136 ~l~g~~~~~lP~ 147 (299)
|.....+|+
T Consensus 161 ---G~~r~~v~~ 169 (445)
T 3vdg_A 161 ---GAVRDAVPF 169 (445)
T ss_dssp ---CCSSSEEEB
T ss_pred ---CCCCCeEEE
Confidence 754445665
|
| >3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A | Back alignment and structure |
|---|
Probab=98.52 E-value=5.4e-06 Score=79.83 Aligned_cols=218 Identities=17% Similarity=0.169 Sum_probs=127.3
Q ss_pred CceeeEEEeEEeC---CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH-----HHH
Q psy12655 1 MPISKIHARQIFD---SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF-----INN 71 (299)
Q Consensus 1 ~~I~~v~ar~ilD---srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~-----in~ 71 (299)
|+|++|..+.+-- ....+++=|+|.|++|.. -|-+..+ .+ .+..+++. +.+
T Consensus 10 mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~-----~~---------------~~~~~~~~~~~~~~~~ 69 (394)
T 3mkc_A 10 APIKSIEFIPVNYQASNWSQNTVVVKVTDENGVYGLGEADGS-----PD---------------AILAYANIETEHKWLT 69 (394)
T ss_dssp CCEEEEEEEEEEEC----CEEEEEEEEEETTSCEEEEEECSC-----HH---------------HHHHHHTCCCCBTTBC
T ss_pred CeEEEEEEEEEecCCCCCCccEEEEEEEECCCCeEEEEecCc-----HH---------------HHHHHHhcccchhhHH
Confidence 7899999988731 134578999999999975 4543311 00 01111111 233
Q ss_pred hHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccce
Q psy12655 72 DIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPA 149 (299)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~ 149 (299)
.++|.|+ |.|+.+...+-+.|.... ....+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+| .
T Consensus 70 ~l~p~li--G~dp~~~e~~~~~l~~~~--~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~--~ 140 (394)
T 3mkc_A 70 NITEKAI--GRLPIEINAIWDAMYDAT--QWQGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLG---GTNKDKVH--P 140 (394)
T ss_dssp CTTTTTT--TSCTTCHHHHHHHHHHHT--HHHHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEC--C
T ss_pred HHHHHhC--CCChhHHHHHHHHHHHhh--hhcCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeE--E
Confidence 4899999 789999888777775421 0000112 3588999999999999999999999999 65433343 3
Q ss_pred EEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc---ccCCCCCcCCCCCChHHHHHH
Q psy12655 150 FNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT---AVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 150 ~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t---~vgdeGgfap~~~~~e~aL~l 226 (299)
..-+.+. ++ ...+..+.++ ++-...++.++ .|.... .+|.. ..+.++.++.
T Consensus 141 y~s~~~~--------------~~-~~~~~~~~~~---~~~~~a~~~~~--~G~~~~K~~k~g~~------~~~~~~d~e~ 194 (394)
T 3mkc_A 141 YLTLYPA--------------IP-VDASLDVAIK---GYAPLLEKAKA--HNIRAVKVCVPIKA------DWSTKEVAYY 194 (394)
T ss_dssp EEECCCS--------------CC--CCCHHHHHH---HHHHHHHHHHH--TTCSEEEEECCTTC------CCCHHHHHHH
T ss_pred EEecCCc--------------CC-CCcchhhhHH---HHHHHHHHHHH--cCCCEEEeCccCCC------ccCHHHHHHH
Confidence 3222110 00 1123333332 11123333333 242111 22311 1356777777
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCcc-CHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWL-PADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~-t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| .++.|.+|+ ++ .+ |.+|-+++... +++|.|.+||+|+.
T Consensus 195 v~avR~a~G--~d~~l~vDa-------N~---------------~~~~~~~A~~~~~~-L~~~~i~~iEeP~~ 242 (394)
T 3mkc_A 195 LRELRGILG--HDTDMMVDY-------LY---------------RFTDWYEVARLLNS-IEDLELYFAEATLQ 242 (394)
T ss_dssp HHHHHHHHC--SSSEEEEEC-------TT---------------CCCCHHHHHHHHHH-TGGGCCSEEESCSC
T ss_pred HHHHHHHhC--CCCeEEEeC-------CC---------------CCCCHHHHHHHHHH-hhhcCCeEEECCCC
Confidence 765555556 467888885 11 24 56777776554 57899999999985
|
| >3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A | Back alignment and structure |
|---|
Probab=98.52 E-value=1e-05 Score=79.32 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=80.8
Q ss_pred CceeeEEEeEEe-------CCCC--C---eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF-------DSRG--N---PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il-------DsrG--~---pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- +++| + ..+=|+|.|++|.. .|-++. +.++..++
T Consensus 23 mkI~~i~~~~v~~P~~~~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g---------------------~~~v~~~i- 80 (441)
T 3vc5_A 23 MLIREVRVTPVAFRDPPLLNAAGVHQPWALRTIVEVVTDEGITGLGETYG---------------------DLAHLEQV- 80 (441)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTCCEEEEEEEC---------------------CHHHHHHH-
T ss_pred cEEEEEEEEEEecCCcccccccCccccceeEEEEEEEECCCCEEEEeCCC---------------------hHHHHHHH-
Confidence 789999998873 3444 2 34788999999875 554431 11244443
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCC---CcccCC--------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTE---NKSKFG--------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~---nks~lG--------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+ .++|.|+ |.|+.+-..+-+.|...- +.. +...-| ..|+-|+-+|+.=..++..|+|||+.|+
T Consensus 81 --~-~l~p~Li--G~d~~~~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG 155 (441)
T 3vc5_A 81 --R-AAAARLP--GLDVYALHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLG 155 (441)
T ss_dssp --H-HHHHTCT--TSBTTCHHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT
T ss_pred --H-HHHHHhC--CCChhHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 3 4899999 789999888888776542 110 111112 1589999999999999999999999998
Q ss_pred hhhCCCcccccc
Q psy12655 136 DLAGNSNIILPV 147 (299)
Q Consensus 136 ~l~g~~~~~lP~ 147 (299)
|.....+|+
T Consensus 156 ---G~~rd~v~~ 164 (441)
T 3vc5_A 156 ---GKVRDAVPY 164 (441)
T ss_dssp ---CCSSSEEEB
T ss_pred ---CCCCCeEEE
Confidence 754445665
|
| >3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.1e-06 Score=80.86 Aligned_cols=205 Identities=16% Similarity=0.213 Sum_probs=123.1
Q ss_pred CceeeEEEeEEe--------CCCCC----e-eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN----P-TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~----p-Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+= +|+|. . .+=|+|.|++|.. .|-+ |.+. |. .+...+
T Consensus 6 ~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~-----------------~~-e~~~~~ 67 (377)
T 3my9_A 6 SVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEV-----------------FT-GTPEAA 67 (377)
T ss_dssp CBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC-----------------------CHHHH
T ss_pred CEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCCEEEEecccCCC-----------------cC-CCHHHH
Confidence 678888876552 45553 4 7889999999875 4433 2210 11 234556
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...|++.++|.|+ |.++.+...+-+.|...- +-...|+.|+-+|+.-..++..|+|||+.|+ |.....+
T Consensus 68 ~~~i~~~l~p~li--G~d~~~~~~~~~~l~~~~------~~~~~A~said~AlwDl~gk~~g~Pl~~LLG---g~~r~~v 136 (377)
T 3my9_A 68 FSALDIYLRPLIL--GAPIKRVRELMARMDKML------VGHGEAKAAVEMALLDILGKATGLSVADLLG---GRVRDRI 136 (377)
T ss_dssp HHHHHTTTHHHHT--TCBTTCHHHHHHHHHHHS------CSCHHHHHHHHHHHHHHHHHHHTCBTTGGGT---CCSCSEE
T ss_pred HHHHHHHHHHHhC--CCCcCCHHHHHHHHHHHh------cCchhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCeE
Confidence 6677777999998 789998888777665431 1124689999999999999999999999998 6544445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
|+- .-+ . ..+..+.+ .+.++.+.+ |. +-..+|. .+.++-
T Consensus 137 ~~~--~t~------------------~--~~~~~~~~-------~~a~~~~~~--G~~~~K~Kvg~--------~~~~~d 177 (377)
T 3my9_A 137 PLS--FSI------------------A--DPDFDADL-------ERMRAMVPA--GHTVFKMKTGV--------KPHAEE 177 (377)
T ss_dssp EBC--EEE------------------C--CSSHHHHH-------HHHHHHTTT--TCCEEEEECSS--------SCHHHH
T ss_pred EEE--Eec------------------C--CCCHHHHH-------HHHHHHHHc--CCCEEEEccCC--------CcHHHH
Confidence 541 111 1 11333322 223333332 32 1112331 235666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+ ++.|. .++-++ +.+.+++|+|.+||+|+.
T Consensus 178 ~~~v~avR~~~g--~~~~l~vDa-------n~~~~---------------~~~A~~-~~~~l~~~~i~~iEqP~~ 227 (377)
T 3my9_A 178 LRILETMRGEFG--ERIDLRLDF-------NQALT---------------PFGAMK-ILRDVDAFRPTFIEQPVP 227 (377)
T ss_dssp HHHHHHHHHHHG--GGSEEEEEC-------TTCCC---------------TTTHHH-HHHHHHTTCCSCEECCSC
T ss_pred HHHHHHHHHHhC--CCCeEEEeC-------CCCcC---------------HHHHHH-HHHHHhhcCCCEEECCCC
Confidence 666654444445 568888885 23343 334444 345567799999999985
|
| >3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=9.6e-06 Score=78.14 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=119.1
Q ss_pred CceeeEEEeEE-------eC---CCCCe-----eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQI-------FD---SRGNP-----TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~i-------lD---srG~p-----Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+ |. |+|.. ++=|+|.|+ |.. .|-+..+
T Consensus 12 mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~td-G~~G~GE~~~~-------------------------- 64 (392)
T 3v5c_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSIHM-------------------------- 64 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECCSC--------------------------
T ss_pred cEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEc-CCEEEEeecCc--------------------------
Confidence 67887776655 33 36643 556788888 865 5544321
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccc
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNII 144 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~ 144 (299)
.+.++|.|+ |.++.+... . ...+...|+.|+-+|++=..++..|+|||+.|+ |.....
T Consensus 65 -----~~~l~~~li--G~d~~~~~~-------~-----~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~ 122 (392)
T 3v5c_A 65 -----TPEWAEDVI--GRRLLDLFD-------D-----RGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAHLET 122 (392)
T ss_dssp -----CHHHHHTTT--TCBGGGGBC-------T-----TSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHS---CCCSCC
T ss_pred -----HHHHHHHhC--CCCHHHHHh-------h-----ccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCcc
Confidence 024789998 788865311 1 123445789999999999999999999999998 654322
Q ss_pred ---cccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChH
Q psy12655 145 ---LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 145 ---lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e 221 (299)
+++|+....-|-. + + -| ..+- +..+ ++-.+.++.++.-|..+-..+|..+.|.++..+.+
T Consensus 123 ~~~v~v~~y~~~~~~~--~--~-------~~--~~~~-~~~e---~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~ 185 (392)
T 3v5c_A 123 GASLVVPCYDTSLYFD--D--L-------HL--ADER-AAVA---LMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTK 185 (392)
T ss_dssp CCCEEEEEEEEEECBT--T--T-------TC--CCHH-HHHH---HHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHH
T ss_pred cccceEEEEEeecccc--c--c-------cc--cccc-cCHH---HHHHHHHHHHHCCCCEEEECCCCCCccccccccHH
Confidence 4577664321110 0 0 01 1111 1111 11223333333211112224565555555444456
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...=+..| +++.|.+|+ + ..+|.+|-+.+...| ++|.+.+||+|+.
T Consensus 186 ~d~~~v~avR~a~g--~~~~l~vDa--------------------N--~~w~~~~A~~~~~~L-~~~~l~~iEeP~~ 237 (392)
T 3v5c_A 186 RDIAIVRGISEVAG--PAGKIMIDA--------------------N--NAYNLNLTKEVLAAL-SDVNLYWLEAAFH 237 (392)
T ss_dssp HHHHHHHHHHHHHC--TTCCEEEEC--------------------T--TCCCHHHHHHHHHHT-TTSCCCEEECSSS
T ss_pred HHHHHHHHHHHHcC--CCCcEEeeC--------------------C--CCcCHHHHHHHHHhc-ccCCCeEEeCCCC
Confidence 66665544333356 468888886 1 235667766665555 7899999999985
|
| >3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.1e-05 Score=79.00 Aligned_cols=116 Identities=12% Similarity=0.080 Sum_probs=78.1
Q ss_pred CceeeEEEeEEe-------CCCC--C---eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF-------DSRG--N---PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il-------DsrG--~---pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.|- ++.| . ..+=|+|.|++ .. -|-++ ++.++..++
T Consensus 27 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~-~~G~GE~~---------------------g~~~~~~~i- 83 (445)
T 3va8_A 27 SIIKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITED-SYGLGESY---------------------GDSAHLDRL- 83 (445)
T ss_dssp TBCCEEEEEEEEEECCCBEETTEECCSEEEEEEEEEECSS-CEEEEEEE---------------------CCHHHHHHH-
T ss_pred CEEEEEEEEEEecCCcccccccCcccCceeEEEEEEEECC-CEEEEecC---------------------CcHHHHHHH-
Confidence 789999998773 3333 1 23678888876 43 34332 112344443
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCC---CcccCC--------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTE---NKSKFG--------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~---nks~lG--------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+ .++|.|+ |.|+.+...|-+.|...- +.. ....-| ..|+.|+-+|+.=..++..|+|||+.|+
T Consensus 84 --~-~l~p~Li--G~d~~~ie~i~~~l~~~~~~~~~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG 158 (445)
T 3va8_A 84 --Q-KAADKIK--GLSVYSTNVIYQRCVESLRNDTNTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLG 158 (445)
T ss_dssp --H-HHHHHHT--TSBTTCHHHHHHHHHHHTTTCCC--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT
T ss_pred --H-HHHHHHC--CCChhHHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 3 4899999 789999988888876642 110 001112 2589999999999999999999999998
Q ss_pred hhhCCCcccccc
Q psy12655 136 DLAGNSNIILPV 147 (299)
Q Consensus 136 ~l~g~~~~~lP~ 147 (299)
|.....+|+
T Consensus 159 ---G~~r~~v~~ 167 (445)
T 3va8_A 159 ---GRVRDSVQY 167 (445)
T ss_dssp ---CCSSSEEEB
T ss_pred ---CCCCCeEEE
Confidence 754445665
|
| >4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-05 Score=77.64 Aligned_cols=117 Identities=17% Similarity=0.216 Sum_probs=78.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|+|++|..+.+ + .....|=|+|+|++|.. |--|+ -+.+.++.. .+.+.++|.|+
T Consensus 1 MkIt~ie~~~~-~-~~~~~~~V~v~td~G~~----------G~GE~---------~~~~~~~~~---~i~~~l~p~li-- 54 (400)
T 4dxk_A 1 MKITKLETVRV-A-ERTNLLWVLVHTDEGIT----------GLGET---------FFGAETVET---YVHEYIAPRVI-- 54 (400)
T ss_dssp CCEEEEEEEEE-T-TSTTEEEEEEEETTSCC----------EEEEE---------ESCHHHHHH---HHHHTHHHHHT--
T ss_pred CeEEEEEEEEE-C-CCCCEEEEEEEECCCCE----------EEEcC---------CCCccHHHH---HHHHHHHHHhC--
Confidence 89999999877 3 34457889999999864 22221 012223333 34455999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|..+-|... ..+-..|+.|+-+|+.=..++..|+|||+.|+ |....++|+
T Consensus 55 G~dp~~~~~~~~~~~~~~~~~~-~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 117 (400)
T 4dxk_A 55 GRDPLQIDLLAQDLVGYLGFRS-SGAEVRGNSAFDIALWDIFGKATNQPIAQLLG---GFSRREIRT 117 (400)
T ss_dssp TSCTTCHHHHHHHHCCSSSCSS-CSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSCEEE
T ss_pred CCCcchHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCccCceeE
Confidence 7899998877777721111000 00112688999999999999999999999999 754344554
|
| >3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=9e-06 Score=78.09 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=124.2
Q ss_pred CceeeEEEeEEe----------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF----------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il----------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+= +|.| ++.+=|+|.|++|.. -|-+. | ++ +.+.++..+
T Consensus 3 MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~-~--~~--------------~~~~~~~~~ 65 (389)
T 3ozy_A 3 LKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPS-G--PY--------------DLAVLKRAI 65 (389)
T ss_dssp CCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSCCEEECCC-S--SS--------------CHHHHHHHH
T ss_pred CEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCCEEEEecC-C--CC--------------CchHHHHHH
Confidence 789999988762 2222 467889999999864 33322 1 00 112234333
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhh---cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKL---DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l---DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
++ .++|.|+ |.++.+...+-+.|... -+.... ..-..|+.|+-+|+.-+.++..|+|||+.|+ |...
T Consensus 66 ---i~-~l~p~l~--G~d~~~~~~~~~~l~~~~~~~~~g~~-~~~~~A~said~AlwDl~gK~~g~Pl~~LLG---g~~r 135 (389)
T 3ozy_A 66 ---ED-VIGPQLI--GEDPANINYLWHKVFHGEVSRNLGHR-SVGIAAMSGVDIALWDLKGRAMNQPIYQLLG---GKFH 135 (389)
T ss_dssp ---HH-TTHHHHT--TSCTTCHHHHHHHHHHHTHHHHHCSB-SHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCSS
T ss_pred ---HH-HHHHHHc--CCCcchHHHHHHHHHhhhhhhccCCc-hHHHHHHHHHHHHHHHHhHhHcCCCHHHHhC---Cccc
Confidence 34 4899998 78999988877777543 111110 1123588999999999999999999999998 6532
Q ss_pred cc-cccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCC
Q psy12655 143 II-LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILD 219 (299)
Q Consensus 143 ~~-lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~ 219 (299)
.. +| ....+-| . ..+.++..+ ++++.++ .|. +-..+|. +
T Consensus 136 ~~~v~--~y~~~~~-----------------~-~~~~e~~~~-------~a~~~~~--~G~~~iKiKvG~---------~ 177 (389)
T 3ozy_A 136 TRGVR--AYASSIY-----------------W-DLTPDQAAD-------ELAGWVE--QGFTAAKLKVGR---------A 177 (389)
T ss_dssp TTCEE--EEEEEEC-----------------S-SCCHHHHHH-------HHHHHHH--TTCSEEEEECCS---------C
T ss_pred CCcee--eEEecCC-----------------C-CCCHHHHHH-------HHHHHHH--CCCCEEeeccCC---------C
Confidence 23 33 3332211 0 223333322 2233332 232 1112332 5
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+++.++.+...-+..| .++.|.+|+ ++ .+|.+|-+++.. .+++|+|.+||+|+.
T Consensus 178 ~~~d~~~v~avR~a~g--~d~~l~vDa-------n~---------------~~~~~~A~~~~~-~l~~~~i~~iEqP~~ 231 (389)
T 3ozy_A 178 PRKDAANLRAMRQRVG--ADVEILVDA-------NQ---------------SLGRHDALAMLR-ILDEAGCYWFEEPLS 231 (389)
T ss_dssp HHHHHHHHHHHHHHHC--TTSEEEEEC-------TT---------------CCCHHHHHHHHH-HHHHTTCSEEESCSC
T ss_pred HHHHHHHHHHHHHHcC--CCceEEEEC-------CC---------------CcCHHHHHHHHH-HHHhcCCCEEECCCC
Confidence 6777777766555556 467888885 11 245677666554 557899999999985
|
| >4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.1e-05 Score=75.80 Aligned_cols=112 Identities=23% Similarity=0.198 Sum_probs=70.2
Q ss_pred CceeeEEEeEEeCC--CC------------CeeEEEEEEECC--Cce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQIFDS--RG------------NPTVEVDLTTEL--GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~ilDs--rG------------~pTvevev~~~~--g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|..+.+-=. ++ ..++=|+|.|++ |.. -|-+.. . |.+..
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~~G~Ge~~~-----------~---------g~~~~ 64 (441)
T 4a35_A 5 GRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFT-----------L---------GKGTE 64 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCCCEEEEEEE-----------C---------STTHH
T ss_pred CEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCCEEEEeeeC-----------C---------CCChH
Confidence 68999998877422 11 136889999997 864 443322 1 11122
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHHHHHHH-HhhcCCCCcccCC------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFM-IKLDGTENKSKFG------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L-~~lDgT~nks~lG------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.....+ +.++|.|+ |.|+.+-..+-+.| ..+.........| ..|+.|+=+|+.=..++..|+|||+.|+
T Consensus 65 ~~~~~i-~~l~~~li--G~d~~~i~~~~~~~~~~l~~~~~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG 140 (441)
T 4a35_A 65 VVVCAV-NALAHHVL--NKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLV 140 (441)
T ss_dssp HHHHHH-HHHGGGTT--TCBHHHHHTTHHHHHHHHHSCTTGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHH
T ss_pred HHHHHH-HHHHHHhC--CCCHHHHHHHHHHHHHHHhhccceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 223334 45899999 78888764332222 2232110000112 3689999999999999999999999999
|
| >3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A | Back alignment and structure |
|---|
Probab=98.31 E-value=2.1e-05 Score=77.43 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=69.7
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
++|=|+|.|++|.. -|.+.. + ..++..|.+.++|.|+ |.|+.+...|-+.|..
T Consensus 65 ~~vlV~V~tddGi~G~Ge~~~---------------------~---~~~~~~i~~~lap~Li--G~dp~~ie~i~~~m~~ 118 (455)
T 3fxg_A 65 GSFLVEIEATDGTVGFATGFG---------------------G---PPACWLVHQHFERFLI--GADPRNTNLLFEQMYR 118 (455)
T ss_dssp CEEEEEEEETTSCEEEEEEEC---------------------H---HHHHHHHHHTTHHHHT--TCCTTCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCEEEEeCcC---------------------C---HHHHHHHHHHHHHHHC--CCCcchHHHHHHHHHH
Confidence 45889999999875 433221 1 1234557778999999 7899998888777754
Q ss_pred hcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 97 LDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 97 lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.. ....+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 119 ~~--~~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~rd~vp~ 166 (455)
T 3fxg_A 119 AS--MFYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIG---GATKERLDF 166 (455)
T ss_dssp HT--TTTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSEEEE
T ss_pred hh--hhccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CccCCeeEE
Confidence 31 1111223 2478999999999999999999999998 754344554
|
| >3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A | Back alignment and structure |
|---|
Probab=98.27 E-value=2.1e-05 Score=77.58 Aligned_cols=106 Identities=16% Similarity=0.217 Sum_probs=73.6
Q ss_pred CceeeEEEeEEeCCCC---------Ce---eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIFDSRG---------NP---TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG---------~p---Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+-|--++. .| .+=|+|.|++|.. -|-++. +..+..+
T Consensus 8 ~~It~i~~~~v~~~d~~~~~~~g~h~p~~~~~~V~i~td~Gi~G~GE~~~---------------------~~~v~~~-- 64 (470)
T 3p0w_A 8 PRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPG---------------------GEGIRQA-- 64 (470)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC---------------------CHHHHHH--
T ss_pred CeEEEEEEEEecCCCcccccccccCCCcceEEEEEEEECCCCEEEEeCCC---------------------hHHHHHH--
Confidence 5799998888854422 12 5688999999875 554431 1224333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccC-------------------C--------ChhhHHHHHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKF-------------------G--------ANAILGVSLAVAK 120 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~l-------------------G--------aNailavSlA~ak 120 (299)
|++ ++|.|+ |.|+.+...+-+.|...-- +..+- | ..|+-|+-+|+.=
T Consensus 65 -i~~-l~p~Li--G~d~~~ie~i~~~~~~~~~--~~~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALWD 138 (470)
T 3p0w_A 65 -LER-VIPLVV--GQSIGRTNGVLSSIRRALA--GGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLD 138 (470)
T ss_dssp -HHH-TGGGTT--TCBGGGHHHHHHHHHHHHC---------------------------------CHHHHHHHHHHHHHH
T ss_pred -HHH-HHHHhC--CCChhhHHHHHHHHHHHHh--hcCCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 444 899999 7899998888777755320 00111 1 1689999999999
Q ss_pred HHHHhcCCchHHHHH
Q psy12655 121 AGAAKKGVPLYKHLA 135 (299)
Q Consensus 121 AaA~~~~~pLy~yi~ 135 (299)
..++..|+|||+.|+
T Consensus 139 l~gK~~g~Pv~~LLG 153 (470)
T 3p0w_A 139 LLGQFLEVPVAELLG 153 (470)
T ss_dssp HHHHHHTSBGGGTST
T ss_pred HHHHHcCCcHHHHhC
Confidence 999999999999998
|
| >3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2.2e-05 Score=76.14 Aligned_cols=98 Identities=23% Similarity=0.199 Sum_probs=68.2
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
.+|=|+|.|++|.. -|.+.. | ..+...|++.++|.|+ |.|+.+...+-+.|..
T Consensus 59 ~~v~V~v~td~G~~G~Ge~~~---------------------g---~~~~~~i~~~l~p~Li--G~dp~~ie~i~~~m~~ 112 (404)
T 3ekg_A 59 GTLVVEIEASDGNVGFAVTTG---------------------G---EPAAYIVEKHLARFLE--GARVTDIERIWDQMYN 112 (404)
T ss_dssp CEEEEEEEETTSCEEEEEEEC---------------------H---HHHHHHHHHTTHHHHT--TSBTTCHHHHHHHHHH
T ss_pred cEEEEEEEECCCCEEEEeCCC---------------------c---HHHHHHHHHHHHHHHC--CCCcccHHHHHHHHHH
Confidence 45889999999875 443221 1 1234456778999999 7899998887777654
Q ss_pred hcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 97 LDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 97 lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.- .+..+-| ..|+.|+-+|+.=..|+..|+|||+.|+ |.....+|
T Consensus 113 ~~--~~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 159 (404)
T 3ekg_A 113 ST--LYYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLG---GAVRDELQ 159 (404)
T ss_dssp HH--GGGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSEEE
T ss_pred Hh--hhcCCCcchHHHHHHHHHHHHHHHHHHhCCCHHHHcC---CCCCCeeE
Confidence 21 0011223 2489999999999999999999999999 75433444
|
| >3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A | Back alignment and structure |
|---|
Probab=98.23 E-value=8.5e-05 Score=72.85 Aligned_cols=107 Identities=16% Similarity=0.174 Sum_probs=73.5
Q ss_pred CceeeEEEeEEeCCCC-C-----------eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIFDSRG-N-----------PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG-~-----------pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
++|++|+.+-|--++. + ..+=|+|.|++|.. -|-++. +..+..+
T Consensus 5 ~~It~v~~~~v~~~d~~~~~~~g~~~~~~~~~iV~v~td~Gi~G~GE~~~---------------------~~~v~~~-- 61 (450)
T 3mzn_A 5 PKITKMNVVPVAGEDGFLLNLSGGHEPWFIRCVLVLEDESGNRGVGEIPS---------------------SEGILNG-- 61 (450)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC---------------------CHHHHHH--
T ss_pred CEEEEEEEEEecccCccccccccCCCCcceEEEEEEEECCCCEEEEeCCC---------------------cHHHHHH--
Confidence 5788888888754422 1 13478899999875 554431 1124333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cC--C-------CCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DG--T-------ENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-Dg--T-------~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
|++ ++|.|+ |.|+.+-..|-+.|... -+ . .++ .+-..|+-|+-+|+.=..++..|+|||+.|+
T Consensus 62 -i~~-l~p~Li--G~dp~~ie~i~~~~~~~~~~~~~g~~G~~~~~~-~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG 134 (450)
T 3mzn_A 62 -LEK-CRSLVE--GARVNEVKQVLSRARGLLAQGGPEERGRQTFDL-RVAVHVITAIESALFDLFGQALGMPVADLLG 134 (450)
T ss_dssp -HHH-THHHHT--TCBGGGHHHHHHHHHHHHGGGCCCCCCSSSSCC-CSHHHHHHHHHHHHHHHHHHHHTCBGGGGST
T ss_pred -HHH-HHHHhC--CCChhhHHHHHHHHHHHhhcccCCCcccccccc-hhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 444 899999 78999988887777553 11 0 000 1224789999999999999999999999998
|
| >3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C* | Back alignment and structure |
|---|
Probab=98.18 E-value=5.1e-05 Score=74.55 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred CceeeEEEeEEeCCCC------------CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIFDSRG------------NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG------------~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
++|++|+.+-|--+.. ...+=|+|.|++|.. -|-++. +..+..++
T Consensus 9 ~~It~v~v~~v~~~d~~~~~~~g~h~~~~~~~iV~v~td~Gi~G~GE~~~---------------------~~~v~~~i- 66 (455)
T 3pfr_A 9 PVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPG---------------------GATIENAL- 66 (455)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC---------------------SHHHHHHH-
T ss_pred CEEEEEEEEEeccCCccccccccCCCCcceEEEEEEEECCCCEEEEeCCC---------------------cHHHHHHH-
Confidence 5788888888754311 123468889999875 444431 11244444
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHh--h-cCCCCcccCC-------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIK--L-DGTENKSKFG-------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~--l-DgT~nks~lG-------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+ .++|.|+ |.|+.+-..+-+.|.. . -+.. ...-| ..|+-|+-+|+.=..++..|+|||+.|+
T Consensus 67 --~-~l~p~Li--G~dp~~ie~i~~~~~~~~~~~~~~-~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLG 138 (455)
T 3pfr_A 67 --T-EAIPHVV--GRPISILNKIVNDMHNGYLDADYD-TFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLG 138 (455)
T ss_dssp --H-HHGGGTT--TCBGGGHHHHHHHHHC----------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGST
T ss_pred --H-HHHHHhc--CCChhHHHHHHHHHHhhccccccC-CCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 3 3799999 7899888777776654 1 1000 00112 4689999999999999999999999998
|
| >4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A | Back alignment and structure |
|---|
Probab=98.08 E-value=7.1e-05 Score=73.62 Aligned_cols=101 Identities=15% Similarity=0.194 Sum_probs=67.5
Q ss_pred EEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCC
Q psy12655 22 VDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGT 100 (299)
Q Consensus 22 vev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT 100 (299)
|+|.|++|.. -|-+| +|..+..+++ .++|.|+ |.|+.+...|-+.|.+.-..
T Consensus 59 V~v~Td~Gi~G~GE~~---------------------g~~~~~~~le----~~~p~li--G~dp~~ie~i~~~l~~~~~~ 111 (464)
T 4g8t_A 59 VILKDNSGNTGVGEVP---------------------GGEKIRQTLE----DAKPLVI--GKTLGEYKNVMNTVRQTFND 111 (464)
T ss_dssp EEEEETTSCEEEEEEE---------------------CCHHHHHHHH----HHGGGTT--TCBGGGHHHHHHHHHHHTTT
T ss_pred EEEEECCCCEEEEeCC---------------------CcHHHHHHHH----HHHHHHc--CCCHHHHHHHHHHHHHHhhh
Confidence 7888888864 43332 3334555554 3789999 78999988887777654321
Q ss_pred CCcc---------cCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEE
Q psy12655 101 ENKS---------KFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFN 151 (299)
Q Consensus 101 ~nks---------~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~n 151 (299)
.... ..-.+|+.|+-+|++=..++..|+|||+.||. |.....+|+-...
T Consensus 112 ~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGg--G~~Rd~V~~y~~~ 169 (464)
T 4g8t_A 112 HDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVASLLGD--GQQRDAVEMLGYL 169 (464)
T ss_dssp SCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGGGSTT--SCCCSEEEBCEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC--CCCCceEEEEEEe
Confidence 1111 12236899999999999999999999999972 2333455654433
|
| >3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00085 Score=63.06 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=64.1
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCC-CccchHHHHHHHH
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESF-EVTQQKEIDEFMI 95 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~-~~~dQ~~ID~~L~ 95 (299)
++|=|+| |++|.. .|-+. .+ .|.|.++..+.+.+++.. |+ |. |+.+...+-+.|.
T Consensus 27 ~~~~V~v-td~G~~G~GE~~-----------~~------~~~ge~~~~~~~~l~~~~---l~--g~~d~~~~e~~~~~l~ 83 (338)
T 3ijl_A 27 PDVQVEI-EYEGVTGYGEAS-----------MP------PYLGETVESVMNFLKKVN---LE--QFSDPFQLEDILSYVD 83 (338)
T ss_dssp CEEEEEE-EETTEEEEEEEE-----------CC------GGGSCCHHHHHHHHTTCC---CT--TCCCTTCHHHHHHHHH
T ss_pred eEEEEEE-EeCCcEEEEeee-----------CC------CCCCCCHHHHHHHHHHHH---hc--CCCCccCHHHHHHHHH
Confidence 5677888 888864 33322 11 122334555555555432 66 67 8888887777776
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..- .....|+.|+-+|+.-..++..|+|||+.|+ |. ...+|
T Consensus 84 ~~~------~~~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~-~~~v~ 124 (338)
T 3ijl_A 84 SLS------PKDTAAKAAVDIALHDLVGKLLGAPWYKIWG---LN-KEKTP 124 (338)
T ss_dssp HTC------SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-GGGCC
T ss_pred Hhc------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCcc
Confidence 532 2345789999999999999999999999998 65 33444
|
| >2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0021 Score=60.25 Aligned_cols=104 Identities=8% Similarity=0.056 Sum_probs=68.0
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+|. +.+=|+|.|++|.. .|-+ ..+.. .-|.|.++..+..
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~-----------~~~~~---~~~~~e~~~~~~~ 67 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGEC-----------NAFQT---DWYDHETIASVKH 67 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCEEEEEC-----------CCBSS---TTSCSCBHHHHHH
T ss_pred cEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCCEEEEEe-----------cCCCC---CcCCCCCHHHHHH
Confidence 78999988765 235552 45778889988864 4332 22211 0245556666777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCC
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGV 128 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~ 128 (299)
.+++.+ |.|+ |.++.+...+-+.|....| ...++.|+.+|+.-+.++..|+
T Consensus 68 ~l~~~~-~~l~--G~d~~~~~~l~~~l~~~~g-------~~~a~said~ALwDl~gk~~g~ 118 (342)
T 2okt_A 68 VIEQWF-EDNR--NKSFETYEAALKLVDSLEN-------TPAARATIVMALYQMFHVLPSF 118 (342)
T ss_dssp HHHHHH-HHHT--TCCBCSHHHHHHTTGGGTT-------CHHHHHHHHHHHHHTTCCCCCE
T ss_pred HHHHHH-HHHc--CCCcCCHHHHHHHHHHhhc-------ChHHHHHHHHHHHHHhhhhhCc
Confidence 777766 9998 7899888777666644311 2357888899888777766664
|
| >4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.051 Score=50.42 Aligned_cols=69 Identities=16% Similarity=0.114 Sum_probs=44.5
Q ss_pred CccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhh
Q psy12655 59 GKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLA 138 (299)
Q Consensus 59 Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~ 138 (299)
|.++......++....+.+. +++.. .....+ + ...|.-|+-+|+.-+.++..|+|+|+.++
T Consensus 55 get~e~~~~~l~~~~~~~~~--~~~~~---~~~~~~----~-------~~~a~aaid~AlwDl~gk~~g~pl~~llg--- 115 (329)
T 4gfi_A 55 GESIEGVTADIEAMADRVAA--GLTRQ---ELQQVM----K-------PGAARNAVDCALWDLEAKMSGKRAAEQVL--- 115 (329)
T ss_dssp TCCHHHHHHHHHTTHHHHHH--TCCHH---HHHHHS----C-------SSHHHHHHHHHHHHHHHHHHSCCHHHHHH---
T ss_pred CcCHHHHHHHHHHHhhhhcc--ccchh---hHHhhc----c-------cHHHHHHHHHHHHHHHhhhcCCChhHHhC---
Confidence 34556666666665555554 44332 122211 1 23578899999999999999999999998
Q ss_pred CCCccccc
Q psy12655 139 GNSNIILP 146 (299)
Q Consensus 139 g~~~~~lP 146 (299)
|.....+|
T Consensus 116 G~~~~~v~ 123 (329)
T 4gfi_A 116 GQPAQPLV 123 (329)
T ss_dssp SSCCCCEE
T ss_pred CCCCCcee
Confidence 65543343
|
| >1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.033 Score=51.64 Aligned_cols=92 Identities=13% Similarity=0.020 Sum_probs=59.3
Q ss_pred ceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 2 PISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 2 ~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
+|++|..+.+- .|+| +.++=|+|.|+ |.. .|-+.. + ..|.|..+..+...
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td-G~~G~GE~~~-----------~-----~~~~~e~~~~~~~~ 64 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-EREGWGEISP-----------L-----PGFSQETWEEAQSV 64 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEET-TEEEEEEECC-----------C-----TTTCSSCHHHHHHH
T ss_pred cceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEEC-CeEEEEEecC-----------C-----CCCCccCHHHHHHH
Confidence 57777766552 3455 45677888885 754 333221 1 12555567777778
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchH
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 131 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy 131 (299)
+++.+.|.|+| . . ++++ -..++.|+.+|++-..++..+.|+|
T Consensus 65 l~~~~~~~l~g--~--~----------~l~~-------~~~a~~aid~ALwDl~gk~~g~p~~ 106 (322)
T 1r6w_A 65 LLAWVNNWLAG--D--C----------ELPQ-------MPSVAFGVSCALAELTDTLPQAANY 106 (322)
T ss_dssp HHHHHHHHTTS--C--C----------CCCS-------SHHHHHHHHHHHHHHTTCSCCCSCC
T ss_pred HHHHHHHhhCC--h--h----------hccc-------ChHHHHHHHHHHHHhcCCCCCCCcc
Confidence 88888999984 3 1 1222 1368899999999998888888876
|
| >3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100} | Back alignment and structure |
|---|
Probab=91.52 E-value=0.91 Score=41.91 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=24.5
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCchHH
Q psy12655 106 FGANAILGVSLAVAKAGAAKKGVPLYK 132 (299)
Q Consensus 106 lGaNailavSlA~akAaA~~~~~pLy~ 132 (299)
....++.|+.+|+.-+.++..|+|+|+
T Consensus 68 ~~~~a~said~AlwDl~gk~~g~Pl~~ 94 (330)
T 3caw_A 68 MTTQIEQSIWLARRDALLRKEKKHVFD 94 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCBTTT
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 344789999999999999999999999
|
| >2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A | Back alignment and structure |
|---|
Probab=85.37 E-value=1.9 Score=39.85 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC---CeeEeec
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY---PIVSIED 295 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y---PIvsiED 295 (299)
+.++-++.+...-+..| +++.|.+|+ + ..+|.+|.++++..| ++| +|.+|||
T Consensus 143 ~~~~d~~~v~avr~~~g--~~~~L~vDa--------------------N--~~~~~~~A~~~~~~l-~~~~~~~i~~iEq 197 (332)
T 2ozt_A 143 SPEEEQAILKALLAALP--PGAKLRLDA--------------------N--GSWDRATANRWFAWL-DRHGNGKIEYVEQ 197 (332)
T ss_dssp CHHHHHHHHHHHHHHSC--TTCEEEEEC--------------------T--TCCCHHHHHHHHHHH-HHHCCTTEEEEEC
T ss_pred ChHHHHHHHHHHHHHcC--CCCEEEEcc--------------------c--CCCCHHHHHHHHHHH-HhhccCCcceeEC
Confidence 45666666654444445 457888885 1 235778988888765 788 9999999
Q ss_pred CCC
Q psy12655 296 PML 298 (299)
Q Consensus 296 p~~ 298 (299)
|+.
T Consensus 198 P~~ 200 (332)
T 2ozt_A 198 PLP 200 (332)
T ss_dssp CSC
T ss_pred CCC
Confidence 995
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 299 | ||||
| d2al1a1 | 295 | c.1.11.1 (A:142-436) Enolase {Baker's yeast (Sacch | 4e-66 | |
| d2akza2 | 139 | d.54.1.1 (A:1-139) Enolase {Human (Homo sapiens), | 7e-64 | |
| d2al1a2 | 141 | d.54.1.1 (A:1-141) Enolase {Baker's yeast (Sacchar | 3e-60 | |
| d2akza1 | 294 | c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens) | 7e-59 | |
| d1w6ta1 | 296 | c.1.11.1 (A:138-433) Enolase {Streptococcus pneumo | 1e-58 | |
| d2ptza2 | 139 | d.54.1.1 (A:0-138) Enolase {Trypanosoma brucei [Ta | 1e-57 | |
| d1pdza2 | 139 | d.54.1.1 (A:1-139) Enolase {European lobster (Homa | 9e-55 | |
| d2ptza1 | 291 | c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [ | 3e-54 | |
| d2fyma2 | 139 | d.54.1.1 (A:1-139) Enolase {Escherichia coli [TaxI | 1e-52 | |
| d2fyma1 | 292 | c.1.11.1 (A:140-431) Enolase {Escherichia coli [Ta | 1e-51 | |
| d1w6ta2 | 137 | d.54.1.1 (A:1-137) Enolase {Streptococcus pneumoni | 8e-50 | |
| d1kkoa1 | 251 | c.1.11.2 (A:161-411) beta-Methylaspartase {Citroba | 5e-15 | |
| d1kcza1 | 253 | c.1.11.2 (A:161-413) beta-Methylaspartase {Clostri | 8e-09 |
| >d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 295 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 206 bits (526), Expect = 4e-66
Identities = 99/157 (63%), Positives = 122/157 (77%)
Query: 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKF 200
S +LPVP NV+NGGSHAG LA+QEFMI PTGA +F+EA++IGSEVYH+LK + ++
Sbjct: 1 SPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRY 60
Query: 201 GLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLD 260
G A VGDEGG APNI +E L LIV+AI+ AG+ GKV+IG+D A+SEFFK+G+YDLD
Sbjct: 61 GASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFKDGKYDLD 120
Query: 261 FKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
FKNPNSDKS+WL +L LY +K YPIVSIEDP
Sbjct: 121 FKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPF 157
|
| >d2akza2 d.54.1.1 (A:1-139) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Human (Homo sapiens), gamma isoform [TaxId: 9606]
Score = 195 bits (497), Expect = 7e-64
Identities = 99/138 (71%), Positives = 113/138 (81%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
I KI AR+I DSRGNPTVEVDL T GLFRAAVPSGASTGIYEALELRD DK Y GKGV
Sbjct: 2 IEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGV 61
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
KAV IN+ IAPAL+ V +Q+++D M++LDGTENKSKFGANAILGVSLAV KAG
Sbjct: 62 LKAVDHINSTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAG 121
Query: 123 AAKKGVPLYKHLADLAGN 140
AA++ +PLY+H+A LAGN
Sbjct: 122 AAERELPLYRHIAQLAGN 139
|
| >d2al1a2 d.54.1.1 (A:1-141) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 186 bits (474), Expect = 3e-60
Identities = 88/138 (63%), Positives = 114/138 (82%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
+SK++AR ++DSRGNPTVEV+LTTE G+FR+ VPSGASTG++EALE+RD DK+ + GKGV
Sbjct: 2 VSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGV 61
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
AV +N+ IAPA +K + +V QK +D+F+I LDGT NKSK GANAILGVSLA ++A
Sbjct: 62 LHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAA 121
Query: 123 AAKKGVPLYKHLADLAGN 140
AA+K VPLYKHLADL+ +
Sbjct: 122 AAEKNVPLYKHLADLSKS 139
|
| >d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Human (Homo sapiens), gamma isoform [TaxId: 9606]
Score = 188 bits (478), Expect = 7e-59
Identities = 110/157 (70%), Positives = 136/157 (86%), Gaps = 1/157 (0%)
Query: 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKF 200
S++ILPVPAFNVINGGSHAGNKLAMQEFMILP GA SF +AM++G+EVYH LK VI K+
Sbjct: 1 SDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKY 60
Query: 201 GLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLD 260
G DAT VGDEGGFAPNIL+N E L L+ EAI+KAGYT K+ IGMDVAASEF+++G+YDLD
Sbjct: 61 GKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLD 120
Query: 261 FKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
FK+P +D S+++ D+L ALYQ+F+++YP+VSIEDP
Sbjct: 121 FKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPF 156
|
| >d1w6ta1 c.1.11.1 (A:138-433) Enolase {Streptococcus pneumoniae [TaxId: 1313]} Length = 296 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Streptococcus pneumoniae [TaxId: 1313]
Score = 187 bits (476), Expect = 1e-58
Identities = 65/160 (40%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query: 140 NSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTK 199
N+ + LP P N+INGGSH+ +A QEFMILP GA +F EA++ G+E++H LKK++ ++
Sbjct: 1 NTKV-LPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR 59
Query: 200 FGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG--KVEIGMDVAASEFFKEGQY 257
TAVGDEGGFAP ++G+ I+ AIE AGY V +G D A+SEF+ + +
Sbjct: 60 G--LETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERK 117
Query: 258 DLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
D+ + + + + +E + +YPI++IED M
Sbjct: 118 VYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGM 157
|
| >d2ptza2 d.54.1.1 (A:0-138) Enolase {Trypanosoma brucei [TaxId: 5691]} Length = 139 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Trypanosoma brucei [TaxId: 5691]
Score = 179 bits (456), Expect = 1e-57
Identities = 85/139 (61%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
M I K+H R++ DSRGNPTVEV++TTE G+FR+AVPSGASTG+YEA ELRD DK Y GK
Sbjct: 2 MTIQKVHGREVLDSRGNPTVEVEVTTEKGVFRSAVPSGASTGVYEACELRDGDKKRYVGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
G +AV +N I PAL+ + +Q+E+D M++LDGT NK K GANAILG S+A++K
Sbjct: 62 GCLQAVKNVNEVIGPALIGR--DELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISK 119
Query: 121 AGAAKKGVPLYKHLADLAG 139
A AA KGVPLY++LA LAG
Sbjct: 120 AAAAAKGVPLYRYLASLAG 138
|
| >d1pdza2 d.54.1.1 (A:1-139) Enolase {European lobster (Homarus vulgaris) [TaxId: 6707]} Length = 139 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: European lobster (Homarus vulgaris) [TaxId: 6707]
Score = 172 bits (437), Expect = 9e-55
Identities = 95/136 (69%), Positives = 112/136 (82%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
I+K+ AR IFDSRGNPTVEVDL T GLFRAAVPSGASTG++EALE+RD DK+ YHGK V
Sbjct: 2 ITKVFARTIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGVHEALEMRDGDKSKYHGKSV 61
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
AV +N+ I P ++K +VTQQKE DEFM KLDGTENKS GANAILGVSLA+ KAG
Sbjct: 62 FNAVKNVNDVIVPEIIKSGLKVTQQKECDEFMCKLDGTENKSSLGANAILGVSLAICKAG 121
Query: 123 AAKKGVPLYKHLADLA 138
AA+ G+PLY+H+A+LA
Sbjct: 122 AAELGIPLYRHIANLA 137
|
| >d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Trypanosoma brucei [TaxId: 5691]
Score = 176 bits (447), Expect = 3e-54
Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Query: 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFG 201
+ LPVP FNVINGG HAGN L QEFMI P A+SFSEA+++GSEVYH L+ +I K+G
Sbjct: 2 ELRLPVPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYG 61
Query: 202 LDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDF 261
DA VGDEGGFAP I D E L +++EAIE+AG+ GK I MD AASE + E + +
Sbjct: 62 QDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKFAICMDCAASETYDEKKQQYNL 121
Query: 262 KNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299
+ + W+ A++L Y ++ +YPIVSIEDP +
Sbjct: 122 TFKSPEP-TWVTAEQLRETYCKWAHDYPIVSIEDPYDQ 158
|
| >d2fyma2 d.54.1.1 (A:1-139) Enolase {Escherichia coli [TaxId: 562]} Length = 139 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Escherichia coli [TaxId: 562]
Score = 166 bits (422), Expect = 1e-52
Identities = 86/138 (62%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I KI R+I DSRGNPTVE ++ E G AA PSGASTG EALELRD DK+ + GKG
Sbjct: 3 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKG 62
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
VTKAV +N IA AL+ + + Q ID+ MI LDGTENKSKFGANAIL VSLA AKA
Sbjct: 63 VTKAVAAVNGPIAQALIGKDAK--DQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKA 120
Query: 122 GAAKKGVPLYKHLADLAG 139
AA KG+PLY+H+A+L G
Sbjct: 121 AAAAKGMPLYEHIAELNG 138
|
| >d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Escherichia coli [TaxId: 562]
Score = 169 bits (429), Expect = 1e-51
Identities = 72/155 (46%), Positives = 101/155 (65%), Gaps = 9/155 (5%)
Query: 145 LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA 204
+PVP N+INGG HA N + +QEFMI P GA + EA+++GSEV+HHL KV+ K
Sbjct: 6 MPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKG--MN 63
Query: 205 TAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG--KVEIGMDVAASEFFKEGQYDLDFK 262
TAVGDEGG+APN+ N E L +I EA++ AGY + + MD AASEF+K+G+Y
Sbjct: 64 TAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKY----- 118
Query: 263 NPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ ++ +++ T +E K+YPIVSIED +
Sbjct: 119 VLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGL 153
|
| >d1w6ta2 d.54.1.1 (A:1-137) Enolase {Streptococcus pneumoniae [TaxId: 1313]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Streptococcus pneumoniae [TaxId: 1313]
Score = 159 bits (404), Expect = 8e-50
Identities = 74/133 (55%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I+ ++AR++ DSRGNPT+EV++ TE G F R VPSGASTG +EA+ELRD DK+ Y G G
Sbjct: 4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLG 63
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
KAV +NN IA A++ Q+ ID MI LDGT NK K GANAILGVS+AVA+A
Sbjct: 64 TQKAVDNVNNIIAEAIIGYDV--RDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARA 121
Query: 122 GAAKKGVPLYKHL 134
A +PLY +L
Sbjct: 122 AADYLEIPLYSYL 134
|
| >d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Score = 71.1 bits (174), Expect = 5e-15
Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 45/157 (28%)
Query: 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL 202
+ +P F G ++ + MIL G A+ ++++
Sbjct: 3 VPEAIPLF-----GQSGDDRYIAVDKMILK-GVDVLPHAL------INNVE--------- 41
Query: 203 DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFK 262
+G +G +E +R + + I + + + + D+D
Sbjct: 42 --EKLGFKGEK------LREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGLIF-DMD-- 90
Query: 263 NPNSDKSQWLPADKLTALYQEFIKEYP--IVSIEDPM 297
+ KE + IE P+
Sbjct: 91 -----------PVRCAEYIASLEKEAQGLPLYIEGPV 116
|
| >d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Score = 53.1 bits (127), Expect = 8e-09
Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 14/116 (12%)
Query: 184 IGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVE 241
G + Y ++ K+I + + A E E ++ + + I K
Sbjct: 13 SGDDRYDNVDKMIIKEADVLPHALINNVEEKLGLKGEKLLEYVKWLRDRIIKLRVREDYA 72
Query: 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ Y + D E K + + IE PM
Sbjct: 73 PIFHIDV--------YGTIGAAFDVDIKA---MADYIQTLAEAAKPFHL-RIEGPM 116
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| d2al1a1 | 295 | Enolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d2ptza2 | 139 | Enolase {Trypanosoma brucei [TaxId: 5691]} | 100.0 | |
| d1w6ta2 | 137 | Enolase {Streptococcus pneumoniae [TaxId: 1313]} | 100.0 | |
| d2al1a2 | 141 | Enolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1pdza2 | 139 | Enolase {European lobster (Homarus vulgaris) [TaxI | 100.0 | |
| d2akza1 | 294 | Enolase {Human (Homo sapiens), gamma isoform [TaxI | 100.0 | |
| d2fyma2 | 139 | Enolase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2akza2 | 139 | Enolase {Human (Homo sapiens), gamma isoform [TaxI | 100.0 | |
| d2ptza1 | 291 | Enolase {Trypanosoma brucei [TaxId: 5691]} | 100.0 | |
| d2fyma1 | 292 | Enolase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1w6ta1 | 296 | Enolase {Streptococcus pneumoniae [TaxId: 1313]} | 100.0 | |
| d1kkoa1 | 251 | beta-Methylaspartase {Citrobacter amalonaticus [Ta | 99.11 | |
| d1wufa2 | 126 | N-acylamino acid racemase {Listeria innocua [TaxId | 98.63 | |
| d1jpma2 | 125 | L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: | 98.61 | |
| d1wuea2 | 126 | N-acylamino acid racemase {Enterococcus faecalis [ | 98.43 | |
| d1rvka2 | 126 | Hypothetical protein Atu3453 {Agrobacterium tumefa | 98.33 | |
| d1kcza1 | 253 | beta-Methylaspartase {Clostridium tetanomorphum [T | 98.2 | |
| d2gdqa2 | 115 | Hypothetical protein YitF {Bacillus subtilis [TaxI | 98.16 | |
| d1sjda2 | 125 | N-acylamino acid racemase {Amycolatopsis sp. [TaxI | 98.15 | |
| d2chra2 | 126 | Chlormuconate cycloisomerase {Alcaligenes eutrophu | 98.04 | |
| d2gl5a2 | 122 | Putative dehydratase protein STM2273 {Salmonella t | 98.01 | |
| d1nu5a2 | 126 | Chlormuconate cycloisomerase {Pseudomonas sp. p51 | 98.01 | |
| d1r0ma2 | 127 | N-acylamino acid racemase {Deinococcus radiodurans | 97.68 | |
| d1muca2 | 127 | Muconate-lactonizing enzyme (cis muconate cycloiso | 97.59 | |
| d2mnra2 | 130 | Mandelate racemase {Pseudomonas putida [TaxId: 303 | 97.45 | |
| d1yeya2 | 139 | RTS beta protein {Xanthomonas campestris pv. campe | 97.39 | |
| d1tzza2 | 140 | Hypothetical protein Bll6730 {Bradyrhizobium japon | 97.36 | |
| d1jdfa2 | 133 | D-glucarate dehydratase {Escherichia coli [TaxId: | 97.24 | |
| d1bqga2 | 132 | D-glucarate dehydratase {Pseudomonas putida [TaxId | 97.05 | |
| d1jpdx2 | 116 | L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: | 95.52 | |
| d1kkoa2 | 160 | beta-Methylaspartase {Citrobacter amalonaticus [Ta | 92.1 | |
| d1jpdx1 | 208 | L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: | 91.23 | |
| d1kcza2 | 160 | beta-Methylaspartase {Clostridium tetanomorphum [T | 89.94 | |
| d1rvka1 | 255 | Hypothetical protein Atu3453 {Agrobacterium tumefa | 85.58 | |
| d1jpma1 | 234 | L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: | 85.57 | |
| d1muca1 | 242 | Muconate-lactonizing enzyme {Pseudomonas putida [T | 82.87 | |
| d1nu5a1 | 243 | Chlormuconate cycloisomerase {Pseudomonas sp. p51 | 81.93 | |
| d1wufa1 | 244 | N-acylamino acid racemase {Listeria innocua [TaxId | 81.11 | |
| d1yeya1 | 252 | RTS beta protein {Xanthomonas campestris pv. campe | 81.07 | |
| d1tzza1 | 247 | Hypothetical protein Bll6730 {Bradyrhizobium japon | 80.34 |
| >d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-56 Score=417.65 Aligned_cols=158 Identities=62% Similarity=1.059 Sum_probs=152.2
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChH
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e 221 (299)
+++||+|||||||||+||+|+++||||||+|.++.||+|+|||++||||+|+++|++++|...++|||||||+|+++++|
T Consensus 2 p~~lP~P~~NIinGG~HA~~~ldiQEfmIiP~ga~sf~eal~~~~eVy~~lk~il~~k~~~~~~~vgDEGgfaP~~~~~e 81 (295)
T d2al1a1 2 PYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAE 81 (295)
T ss_dssp TEEECEEEEEEEECGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHH
T ss_pred CCCCCchheeeecCcccCCCCCCCeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccCccccccCccccH
Confidence 58999999999999999999999999999999999999999999999999999999888877789999999999999999
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|++|++||+++||+++|.|||||||||||++|+|+|.|++++...++.+|++||+|||.+|+++|||+||||||+|
T Consensus 82 ~aL~ll~~Ai~~aGy~~~i~i~lD~AAsefy~~~kY~~~~~~~~~~~~~~~s~~elid~y~~li~~YPIisIEDp~~e 159 (295)
T d2al1a1 82 EALDLIVDAIKAAGHDGKVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAE 159 (295)
T ss_dssp HHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred HHHHHHHHHHHhcCCCcceEEEeehhhHHHhhCCcccccccccccCCccccchHHHHHHHHHHHHhCCEEEecCCcCc
Confidence 999999999999999989999999999999999999999988766677889999999999999999999999999997
|
| >d2ptza2 d.54.1.1 (A:0-138) Enolase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=1.4e-56 Score=376.25 Aligned_cols=138 Identities=62% Similarity=0.953 Sum_probs=135.2
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|+|++|+|||||||||||||||||+|++|.+|++||||||||+|||+||||+++.||.||||.+||++||+.|+|+|+
T Consensus 2 M~I~~i~~r~IlDSRG~PTvevev~~~~g~~ra~~PsGaStG~~Ea~elrd~~~~~~~Gkgv~~Av~nin~~I~~~L~-- 79 (139)
T d2ptza2 2 MTIQKVHGREVLDSRGNPTVEVEVTTEKGVFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALI-- 79 (139)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHT--
T ss_pred CeEEEEEEEEEEcCCCCeEEEEEEEECCCceeEeccccccccchhhhhcCCCcccccccchHHHHHHHhhhccchhhc--
Confidence 899999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
|+++.||++||+.|+++|||+||+++|+|+|+|||||+|||+|.++++|||+||++++|+
T Consensus 80 g~~~~dQ~~iD~~li~lDgt~nks~lGaNailAvS~A~akA~A~~~~~pLy~yi~~~~gt 139 (139)
T d2ptza2 80 GRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGT 139 (139)
T ss_dssp TCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred ccchhhHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCC
Confidence 799999999999999999999999999999999999999999999999999999988764
|
| >d1w6ta2 d.54.1.1 (A:1-137) Enolase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=1.2e-56 Score=375.12 Aligned_cols=132 Identities=57% Similarity=0.821 Sum_probs=127.1
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|++||||||||+|||||||+|++|.+ |++||||||||+|||+|+||+|+.||+||||.+||+|||+.|+|+|+
T Consensus 3 ~I~~v~~r~IlDSRG~PTvevev~~~~g~~gra~~PSGAStG~~Ea~elrD~~~~~~~Gkgv~~Av~~in~~i~~~L~-- 80 (137)
T d1w6ta2 3 IITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAII-- 80 (137)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--
T ss_pred ceeEEEEEEEEcCCCCEEEEEEEEECCCccceeecCcCCCcccccceeccCCccccccCCcHHHHHHHHHHHhHHHHc--
Confidence 399999999999999999999999999988 99999999999999999999999999999999999999999999998
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
|++++||++||++|++||||+||+++|+|+|+|||||+|||+|+.+++|||+||+
T Consensus 81 G~d~~dq~~iD~~lielDgT~nks~lGaNailAvSlA~akAaA~~~~~pLy~yig 135 (137)
T d1w6ta2 81 GYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLG 135 (137)
T ss_dssp TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCccccHHHHHHHHHHhcCcccccccchhHHHHHHHHHHHHHHHHcCCcHHHhhc
Confidence 8999999999999999999999999999999999999999999999999999998
|
| >d2al1a2 d.54.1.1 (A:1-141) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.2e-56 Score=374.06 Aligned_cols=139 Identities=63% Similarity=0.964 Sum_probs=135.0
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|+|||||||||||||||||+|++|.+||+||||||||+|||+||||+++.+|+||||.+||++||+.|+|+|+++|
T Consensus 1 ~I~~v~ar~IlDSRG~PTvev~v~~~~g~~ra~~PSGaStG~~EA~elrD~~~~~~~gkgV~~av~nin~~i~~~Li~~g 80 (141)
T d2al1a2 1 AVSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKAN 80 (141)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHT
T ss_pred CcCEEEEEEEECCCCCcEEEEEEEECCCeEEEeeccCCCCCcceeeeecCCCccccccccchhHHHHHHHHhHHHHhhcC
Confidence 48999999999999999999999999998899999999999999999999999999999999999999999999999888
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
+++.||++||++|+++|||+||+++|+|+++|||||+|||+|+.+++|||+||+++.+.
T Consensus 81 ~~~~dq~~iD~~li~lDgT~nks~lGaNailAvS~A~akAaA~~~~~pLy~yl~~~~~~ 139 (141)
T d2al1a2 81 IDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKS 139 (141)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTC
T ss_pred CchhhHHHHHHHHHHccCCcchhhhhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999987653
|
| >d1pdza2 d.54.1.1 (A:1-139) Enolase {European lobster (Homarus vulgaris) [TaxId: 6707]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: European lobster (Homarus vulgaris) [TaxId: 6707]
Probab=100.00 E-value=5.2e-56 Score=371.87 Aligned_cols=136 Identities=69% Similarity=1.023 Sum_probs=132.7
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|+|||||||||||||||||+|++|.+||+||||||||+|||+||||+++.||.||||.+||++||+.|+|+|+++|
T Consensus 1 tI~~i~ar~IlDSRG~PTVev~v~~~~~~~ra~~PSGAStG~~EA~elrD~~~~~~~Gkgv~~Av~nin~~i~~~Li~~g 80 (139)
T d1pdza2 1 SITKVFARTIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGVHEALEMRDGDKSKYHGKSVFNAVKNVNDVIVPEIIKSG 80 (139)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHT
T ss_pred CccEEEEEEEEcCCCCcEEEEEEEECCCeEEEecccCcCCcchhheecccCCccccccccccceeecchhhhhHHHHhcC
Confidence 48999999999999999999999999988899999999999999999999999999999999999999999999999878
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhh
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADL 137 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l 137 (299)
+++.||.+||+.|+++|||+||+++|+|+++|||||+|||+|+.+++|||+||+++
T Consensus 81 ~~~~dq~~iD~~Li~lDgT~nks~lGaNailAvS~A~akAaA~~~~~pLy~yi~~~ 136 (139)
T d1pdza2 81 LKVTQQKECDEFMCKLDGTENKSSLGANAILGVSLAICKAGAAELGIPLYRHIANL 136 (139)
T ss_dssp CCTTCHHHHHHHHHHHHCSSSSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred ccccchhhhHHHHHhhcCccchhhhhhHHHHHHHHHHHHHHHHHcCCcHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999965
|
| >d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Human (Homo sapiens), gamma isoform [TaxId: 9606]
Probab=100.00 E-value=1.6e-55 Score=410.24 Aligned_cols=157 Identities=69% Similarity=1.183 Sum_probs=149.7
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChH
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e 221 (299)
.+.||+||+||||||+||+|+++||||||+|.++.||+|+|||++||||+|+++|++|+|...|+|||||||+|++++++
T Consensus 2 ~~~lP~P~~NiinGG~HA~~~ldiQEFmIiP~ga~sf~eal~~~~eV~~~lk~~L~~k~~~~~~~vgDEGgfaP~~~~~e 81 (294)
T d2akza1 2 DLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENS 81 (294)
T ss_dssp SCCBCEEEEEEEECGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHH
T ss_pred CcCCCccceeeecCcccCCCCCCCeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCceeeeccchH
Confidence 47899999999999999999999999999999999999999999999999999999888877899999999999999999
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|++|.+||+++||+.+|.|||||||||||++|+|.|.++++ ...++.+|++||+|||.+|+++|||+||||||+|
T Consensus 82 ~~l~ll~~Ai~~ag~~~~i~ialD~AASefy~~~kY~~~~~~~-~~~~~~~t~delid~y~~l~~kYPIisIEDP~~E 158 (294)
T d2akza1 82 EALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQ 158 (294)
T ss_dssp HHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred HHHHHHHHHHhccCCCceEEEEechhhhhhhhcCcceeeeccc-CCccceecHHHHHHHHHHHhcccCeEEEeCCCcc
Confidence 9999999999999999999999999999999999999988765 2456789999999999999999999999999997
|
| >d2fyma2 d.54.1.1 (A:1-139) Enolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.4e-55 Score=368.60 Aligned_cols=138 Identities=62% Similarity=0.858 Sum_probs=134.1
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
.+|++|++||||||||+|||||||+|++|.+ ||+||||||||.|||+|+||+|+.+|+||||.+||++||+.|+|+|+
T Consensus 1 skI~~v~~r~IlDSRG~PTvevev~~~~g~~g~a~~PsGaStG~~Ea~elrD~~~~~~~Gkgv~~av~~in~~i~~~Li- 79 (139)
T d2fyma2 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALI- 79 (139)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT-
T ss_pred CeeEEEEEEEEEcCCCCeEEEEEEEECCCCEeEEECCcccCccccccccccCCChhhhcccccchhhHHHHHHHHHHHh-
Confidence 3799999999999999999999999999987 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
|+++.||.+||+.|+++|||+||+++|+|+|+|||||+|||+|+.+++|||+||+++.|+
T Consensus 80 -g~~~~dq~~iD~~li~lDgT~nks~lGaNailAvS~A~akAaA~~~~~pLy~yi~~~~gt 139 (139)
T d2fyma2 80 -GKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGT 139 (139)
T ss_dssp -TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTC
T ss_pred -CCchhhhHHHHHHHHhccCCccccccchHHHHHHHHHHHHHHHHHcCCCHHHHhHhhcCC
Confidence 799999999999999999999999999999999999999999999999999999987653
|
| >d2akza2 d.54.1.1 (A:1-139) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Enolase species: Human (Homo sapiens), gamma isoform [TaxId: 9606]
Probab=100.00 E-value=2.6e-55 Score=368.56 Aligned_cols=139 Identities=71% Similarity=1.054 Sum_probs=135.0
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|+|||||||||+|||||||+|++|.+|++||||||||+|||+|+||+++.+|.||||.+||++||+.|+|+|+++|
T Consensus 1 tI~~i~~r~IlDSRG~PTvevev~~~~g~~~a~~PsGaStG~~Ea~elrd~~~~~~~gkgV~~Av~~i~~~i~~~Li~~g 80 (139)
T d2akza2 1 SIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSG 80 (139)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHC
T ss_pred CcCEEEEEEEEcCCCCeEEEEEEEECCCeEEEecccccccchhhhhhccccccccccCCchhhHHHhhHHHHHHHHHhcC
Confidence 48999999999999999999999999998899999999999999999999999999999999999999999999999778
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
+++.||++||+.|+++|||+||+++|+|+|+|||||+|||+|..+++|||+||+++.|+
T Consensus 81 ~~~~dQ~~iD~~L~~lDgt~nks~lGaNailAvSlA~akA~A~~~~~pLy~yi~~l~gn 139 (139)
T d2akza2 81 LSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGN 139 (139)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTC
T ss_pred CChhhHHHHHHHHHHccCccchhhcChHHHHHHHHHHHHHHHHHcCCcHHHHhHhhhCC
Confidence 99999999999999999999999999999999999999999999999999999988763
|
| >d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=4.3e-54 Score=400.15 Aligned_cols=155 Identities=56% Similarity=0.936 Sum_probs=144.9
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChH
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e 221 (299)
+++||+|||||||||+||+|+++||||||+|.++.||+|+|||++||||+|+++|++|++...++|||||||+|++++++
T Consensus 2 ~~~lP~P~~NIinGG~HA~~~ldiQEFmIiP~g~~sf~eal~~~~eV~~~lk~~L~~k~~~~~~~vgDEGGfaP~~~~~e 81 (291)
T d2ptza1 2 ELRLPVPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDIN 81 (291)
T ss_dssp CCEECEEEEEEEECSTTSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTT
T ss_pred CCCCCcceeeEecccccCCCCCCCeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccH
Confidence 47899999999999999999999999999999999999999999999999999999887776789999999999999999
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccC--CceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKE--GQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~--g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+||++|.+||+++||++++.|||||||||||+. ++|++.++. .+++.+|++||+|||.+|+++|||+||||||+|
T Consensus 82 ~aL~ll~eAi~~ag~~~~~~i~lD~AAsef~~~~~~~Y~l~~~~---~~~~~ls~~elid~y~~l~~~YPIisIEDp~~e 158 (291)
T d2ptza1 82 EPLPILMEAIEEAGHRGKFAICMDCAASETYDEKKQQYNLTFKS---PEPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQ 158 (291)
T ss_dssp THHHHHHHHHHHTTCTTSCEEEEECCGGGGEETTTTEEETTTTS---SSCCEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred HHHHHHHHHHHHcCCCCCeeEEeeechHhhhhcccccccccccc---cCcchhhHHHHHHHHHHHhhccceeEecCCccc
Confidence 999999999999999999999999999999975 567765443 246789999999999999999999999999998
|
| >d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.7e-54 Score=398.48 Aligned_cols=152 Identities=49% Similarity=0.852 Sum_probs=143.5
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCCh
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDN 220 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~ 220 (299)
.+++||+|||||||||+||+|+++||||||+|.++.||+|+|||+++|||+|+++|+++ |. .|+|||||||+|+++++
T Consensus 2 ~~~~lP~P~~NIinGG~HA~~~l~~QEfmIiP~ga~sf~eal~~~~evy~~lk~iL~~k-~~-~t~vgDEGGfap~~~~~ 79 (292)
T d2fyma1 2 GKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSN 79 (292)
T ss_dssp TCCCCCEECEEEEECGGGSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSH
T ss_pred CCcCCCcceeeeecCcccCCCCCCCeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhc-CC-CCcccCccceecccCcc
Confidence 35899999999999999999999999999999999999999999999999999999976 54 78999999999999999
Q ss_pred HHHHHHHHHHHHHcccc--cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 221 KEGLRLIVEAIEKAGYT--GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 221 e~aL~ll~eAi~~ag~~--~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+|||++|.+||+++||+ .||.|||||||||||++++|.|.++ .++.+|++||++||.+|+++|||+||||||+
T Consensus 80 eeaL~ll~eAi~~aGy~~G~di~ialD~AAsefy~~~~y~~~~~-----~~~~~t~~eli~~y~~l~~~yPIisIEDP~~ 154 (292)
T d2fyma1 80 AEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGE-----GNKAFTSEEFTHFLEELTKQYPIVSIEDGLD 154 (292)
T ss_dssp HHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGG-----TTEEECHHHHHHHHHHHHHHSCEEEEESCSC
T ss_pred HHHHHHHHHHHHHcCCCCCceEEEeeeechhhhhccccceeccC-----CCccccHHHHHHHHHHHHhcCceEEEeCCcc
Confidence 99999999999999999 6899999999999999999998643 3467899999999999999999999999999
Q ss_pred C
Q psy12655 299 R 299 (299)
Q Consensus 299 e 299 (299)
|
T Consensus 155 e 155 (292)
T d2fyma1 155 E 155 (292)
T ss_dssp T
T ss_pred c
Confidence 7
|
| >d1w6ta1 c.1.11.1 (A:138-433) Enolase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: Enolase domain: Enolase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3.7e-54 Score=401.11 Aligned_cols=156 Identities=42% Similarity=0.782 Sum_probs=141.8
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChH
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e 221 (299)
..+||+||+||||||+||+|+++||||||+|.++.||+|+|||+++|||+|+++|+++ |. .|+|||||||+|+++++|
T Consensus 2 ~~~lP~P~~NiinGG~HA~~~l~~QEfmIiP~~~~sf~eal~~~~eV~~~lk~~l~~~-~~-~t~vgDEGGfaP~~~~~e 79 (296)
T d1w6ta1 2 TKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTE 79 (296)
T ss_dssp CCEECEECEEEEECGGGCSSSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHH
T ss_pred CCcCCcchhheecCcccCCCCCCCeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhC-CC-CCcccccccccccCcChH
Confidence 3589999999999999999999999999999999999999999999999999999865 54 799999999999999999
Q ss_pred HHHHHHHHHHHHcccc--cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 222 EGLRLIVEAIEKAGYT--GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~--~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+||++|.+||+++||+ .||.|||||||||||++++|.|.|++.+...+..+|++||+|||.+|+++|||+||||||+|
T Consensus 80 ~aL~ll~eAI~~aGy~~G~di~ialD~AAsefy~~~~~~Y~~~~~e~~~~~~~s~~elid~y~~l~~~YPIisIEDP~~e 159 (296)
T d1w6ta1 80 DGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDE 159 (296)
T ss_dssp HHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred HHHHHHHHHHHHcCCCCCCceeeehhhhhhhhhcCCCceeeeccccCCcccccCHHHHHHHHHHHHhcCCeEEEecCccc
Confidence 9999999999999999 58999999999999999888776543222345678999999999999999999999999997
|
| >d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Probab=99.11 E-value=5e-12 Score=113.57 Aligned_cols=110 Identities=19% Similarity=0.248 Sum_probs=84.7
Q ss_pred cccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHH
Q psy12655 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKE 222 (299)
Q Consensus 143 ~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~ 222 (299)
...|+|++ |.|++|+.++|||||++ ++..|.+++ |+ ...+.+|++|+ ++++
T Consensus 3 ~~~~VP~~-----g~~g~~~~~~~e~mI~~-~a~~~~~~~------~~-----------~lk~kvG~~g~------~~~e 53 (251)
T d1kkoa1 3 VPEAIPLF-----GQSGDDRYIAVDKMILK-GVDVLPHAL------IN-----------NVEEKLGFKGE------KLRE 53 (251)
T ss_dssp CCCCCCEE-----CCCTTCTTHHHHHHHHT-TCSEEEETT------CC-----------CCCCCCCTTSH------HHHH
T ss_pred CCCCcccc-----cccCCCcccchHHHHHh-hhHHHHHHH------HH-----------HHHHHhCCCCC------CcHH
Confidence 46899999 99999999999999985 666654332 11 12356899997 4678
Q ss_pred HHHHHHHHHHHcccc--cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc---CCeeEeecCC
Q psy12655 223 GLRLIVEAIEKAGYT--GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE---YPIVSIEDPM 297 (299)
Q Consensus 223 aL~ll~eAi~~ag~~--~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~---yPIvsiEDp~ 297 (299)
.++.+.++|+.+++. .++.|.+|+-.+. .+. .-.|.+|+++|+.+|.+. ||| +||||+
T Consensus 54 ~~~~~~~rI~~~r~~~G~~~~i~iD~~~~~-----~~~-----------~~~~~~~ai~~l~~L~~~~~~~~l-~IEqP~ 116 (251)
T d1kkoa1 54 YVRWLSDRILSLRSSPRYHPTLHIDVYGTI-----GLI-----------FDMDPVRCAEYIASLEKEAQGLPL-YIEGPV 116 (251)
T ss_dssp HHHHHHHHHHHHCSSTTCCCEEEEECTTHH-----HHH-----------TTTCHHHHHHHHHHTGGGGTTSCE-EEECCC
T ss_pred HHHHHHHHHHHHHhCcCCCcceeecccccc-----ccc-----------cCCCHHHHHHHHHHHHHhcCCCce-eecCCc
Confidence 999999999999988 5899999973321 122 235789999999999876 565 999999
Q ss_pred C
Q psy12655 298 L 298 (299)
Q Consensus 298 ~ 298 (299)
+
T Consensus 117 ~ 117 (251)
T d1kkoa1 117 D 117 (251)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1wufa2 d.54.1.1 (A:1001-1126) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: N-acylamino acid racemase species: Listeria innocua [TaxId: 1642]
Probab=98.63 E-value=7.2e-08 Score=76.52 Aligned_cols=112 Identities=22% Similarity=0.250 Sum_probs=85.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .++|=|+|.|++|.. .|-+.+ +.. ..|.+..+..++.
T Consensus 1 Mki~~i~~~~~~lPl~~p~~~s~~~~~~~~~~iv~i~t~~G~~G~GE~~~-----------~~~---~~~~~e~~~~~~~ 66 (126)
T d1wufa2 1 MYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIHGYGELEA-----------FPL---PDYTEETLSSAIL 66 (126)
T ss_dssp EECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEEEEECC-----------CSS---TTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEECcCEEEEEEEEEEEEEEECCCcEEEEEEee-----------cCc---cCCChhhhhhhhh
Confidence 677777766542 3454 467788899999875 553321 111 1377888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.++|.|+ |.++.+...+.+.|..+.|. .-|.-|+.+|+.-+.|+..|+|||++||
T Consensus 67 ~l~~~l~p~l~--g~~~~~~~~i~~~~~~~~~~-------~~A~aaid~AlwDl~~K~~~~pl~~lLG 125 (126)
T d1wufa2 67 IIKEQLLPLLA--QRKIRKPEEIQELFSWIQGN-------EMAKAAVELAVWDAFAKMEKRSLAKMIG 125 (126)
T ss_dssp HHHHTTHHHHH--HCEESSTTHHHHHHTTSCSC-------HHHHHHHHHHHHHHHHHHTTSBHHHHTT
T ss_pred eeeecccchhc--CCCchhHHHHHHHhhhccCc-------hHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 99999999999 67889999999988766432 1267899999999999999999999987
|
| >d1jpma2 d.54.1.1 (A:1-125) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: L-Ala-D/L-Glu epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.61 E-value=4.7e-07 Score=71.03 Aligned_cols=110 Identities=25% Similarity=0.307 Sum_probs=82.3
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+- +|.| .+.|=|+|.|++|.. .|-+... ..|.|.....+.+
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~iv~i~t~~G~~G~GE~~~~----------------~~~~~e~~~~~~~ 64 (125)
T d1jpma2 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPT----------------LVITGDSMDSIES 64 (125)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCB----------------TTTTCBCHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeEccCeEEEEEEEEEEEEEECCCCEEEEEeccc----------------ccccccccchhHH
Confidence 788888877653 4444 345678888888865 4433221 1366778899999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.++|.|+ |.++.+..++.+.|... .|. .-|.-|+.+|+.-+.|+..|+|||++||
T Consensus 65 ~i~~~~~p~l~--g~~~~~~~~~~~~l~~~~~~~-------~~a~aaid~AlwDl~~K~~g~pl~~llG 124 (125)
T d1jpma2 65 AIHHVLKPALL--GKSLAGYEAILHDIQHLLTGN-------MSAKAAVEMALYDGWAQMCGLPLYQMLG 124 (125)
T ss_dssp HHHHTHHHHHT--TCBGGGHHHHHHHHHHSSSSC-------HHHHHHHHHHHHHHHHHHTTSBHHHHTT
T ss_pred HHHHHHHhhhc--ccCcccHHHHHHHhhhhccCc-------cHHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 99999999998 78898888777766542 221 1367899999999999999999999997
|
| >d1wuea2 d.54.1.1 (A:1001-1126) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: N-acylamino acid racemase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.43 E-value=1.5e-06 Score=67.51 Aligned_cols=112 Identities=18% Similarity=0.170 Sum_probs=84.6
Q ss_pred CceeeEEEeEEe--------CCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..|.+- +|+|. ..+=|+|.|++|.. .|-+.+. ... .|.+..+.....
T Consensus 1 MKI~~ie~~~~~~pl~~p~~~s~~~~~~~~~~~v~i~t~~G~~G~GE~~~~-----------~~~---~~~~e~~~~~~~ 66 (126)
T d1wuea2 1 MNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAF-----------EQP---DYVQETLVTERF 66 (126)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC-----------SST---TSSSCCHHHHHH
T ss_pred CEEeEEEEEEEeccccCCEEccCeEEEeeeEEEEEEEECCCcEEEEEEecc-----------Ccc---ccchhhhhhhhh
Confidence 899999888754 55554 56777888888865 5543331 111 255667888899
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.++..+.|.++ +.+..+...+.+.|..+.+. .-|.-|+.+|+.-+.|+..++|||++||
T Consensus 67 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~a~aaid~AlwDl~ak~~~~pl~~lLG 125 (126)
T d1wuea2 67 IIQQHLIPLLL--TEAIEQPQEVSTIFEEVKGH-------WMGKAALETAIWDLYAKRQQKSLTEFFG 125 (126)
T ss_dssp HHHHTHHHHHT--TSCCCSTHHHHHHGGGSCSC-------HHHHHHHHHHHHHHHHHHTTSBGGGGSS
T ss_pred hhhcccccccc--ccccccHHHHHHHHhhccCc-------cHHHHHHHHHHHHHHHHHhCCCHHHHhC
Confidence 99999999998 67888888888888766431 1266899999999999999999999986
|
| >d1rvka2 d.54.1.1 (A:1-126) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Hypothetical protein Atu3453 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.33 E-value=3.5e-06 Score=66.53 Aligned_cols=108 Identities=16% Similarity=0.181 Sum_probs=75.9
Q ss_pred CceeeEEEeEE-------eCCCC---------CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQI-------FDSRG---------NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~i-------lDsrG---------~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|..|.+ ++.-+ ...|=|+|.|++|.. .+-++.+ .
T Consensus 1 MkIt~v~~~~~~~pl~~~~~~a~~~~~g~~~~~~~v~V~v~td~G~~G~Ge~~~~------------------------~ 56 (126)
T d1rvka2 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTAPE------------------------I 56 (126)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEECGG------------------------G
T ss_pred CEEEEEEEEEEEeeCCCccccccccCCCCcceeEEEEEEEEECCCCEEEEEeCCH------------------------H
Confidence 89999998876 33322 345778888998865 4433211 0
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
...+.|++.++|.|+ |+++.+...+.+.|....-. .....-..|+-|+-+|+.=+.|+..++|||++||
T Consensus 57 ~~~~~i~~~l~~~li--g~~~~~~~~~~~~~~~~~~~-~~~~~~~~A~aavdiAlwDl~~K~~g~Pl~~LLG 125 (126)
T d1rvka2 57 VRPHVIEKFVKKVLI--GEDHRDRERLWQDLAHWQRG-SAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIG 125 (126)
T ss_dssp GCHHHHHHTHHHHHT--TSBTTCHHHHHHHHHHHHTT-TTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHC
T ss_pred HHHHHHHHHHHHHHh--hcCcchhhhhhhhhcccccc-CCcchhhHHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 112347788999999 78898887776666543221 1123345688999999999999999999999997
|
| >d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Probab=98.20 E-value=8.8e-07 Score=78.77 Aligned_cols=77 Identities=14% Similarity=0.023 Sum_probs=62.4
Q ss_pred ccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHH
Q psy12655 206 AVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT--GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQE 283 (299)
Q Consensus 206 ~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~--~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~ 283 (299)
-.+....+.|+.++..+.++.+.++|+++++. .++.|.+|+..+... ...+|.+|+++|+.+
T Consensus 37 ~~~vK~K~G~~~~~~~e~~~~i~~rI~~~r~~~g~~~~l~iD~~~~~~~----------------n~~~~~~eai~~~~~ 100 (253)
T d1kcza1 37 INNVEEKLGLKGEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGA----------------AFDVDIKAMADYIQT 100 (253)
T ss_dssp CCCCCCCCCTTSHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHH----------------HTTTCHHHHHHHHHH
T ss_pred hhhhchhcCCCccccHHHHHHHHHHHHHHhcccccCceeeehhhhccCc----------------cCCCCHHHHHHHHHH
Confidence 34556777899999999999999999999998 689999998544211 123678999999999
Q ss_pred HHhc---CCeeEeecCCCC
Q psy12655 284 FIKE---YPIVSIEDPMLR 299 (299)
Q Consensus 284 l~~~---yPIvsiEDp~~e 299 (299)
|.+. ||+ +||||+++
T Consensus 101 L~~~~~~y~i-~iEqP~~~ 118 (253)
T d1kcza1 101 LAEAAKPFHL-RIEGPMDV 118 (253)
T ss_dssp HHHHHTTSCE-EEECSBCC
T ss_pred HHHhcCCCCc-eEecCCCC
Confidence 9876 887 89999964
|
| >d2gdqa2 d.54.1.1 (A:4-118) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Hypothetical protein YitF species: Bacillus subtilis [TaxId: 1423]
Probab=98.16 E-value=1.6e-05 Score=61.18 Aligned_cols=101 Identities=17% Similarity=0.136 Sum_probs=73.7
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|.+|..+.+ -+|+|. +.+-|+|.|++|.. .+-+... .....+
T Consensus 1 mKI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~v~i~~d~G~~G~Ge~~~~-----------------------~~~~~~ 57 (115)
T d2gdqa2 1 VKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECVDW-----------------------LPALHV 57 (115)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECSC-----------------------HHHHHH
T ss_pred CEEEEEEEEEEeeecCCceEecCeEEEeeeEEEEEEEECCcceEEEecCCc-----------------------hhhhHH
Confidence 78888886653 356664 56889999999864 4332210 112234
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.|.+.++|.|+ |.++.+...+.+.|... -..|.-|+-||+.=+-|+..++|||++||
T Consensus 58 ~i~~~l~~~l~--g~~~~~~~~~~~~~~~~---------~~~a~aaid~AlwDl~~K~~~~Pl~~lLG 114 (115)
T d2gdqa2 58 GFTKRIIPFLL--GKQAGSRLSLVRTIQKW---------HQRAASAVSMALTEIAAKAADCSVCELWG 114 (115)
T ss_dssp HHHHTHHHHHT--TSBTTCHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT
T ss_pred HHHHHHhhhhc--ccChhhHHHHHHHHHHh---------hhHHHHHHHHHHHHHHHHHhCCCHHHHcC
Confidence 56788999998 78888887777666533 13588999999999999999999999998
|
| >d1sjda2 d.54.1.1 (A:1-125) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: N-acylamino acid racemase species: Amycolatopsis sp. [TaxId: 37632]
Probab=98.15 E-value=6.8e-06 Score=63.37 Aligned_cols=111 Identities=19% Similarity=0.165 Sum_probs=82.5
Q ss_pred CceeeEEEeEE--------eCCC----CCeeEEEEEEECCCceEE-EeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSR----GNPTVEVDLTTELGLFRA-AVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsr----G~pTvevev~~~~g~~ra-~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..|.+ -.|+ ..++|-|+|.+++|...+ ++|++ . ..|.+..+.....
T Consensus 1 MKI~~i~~~~i~~Pl~~p~~~s~~~~~~~~~~iv~l~~~~g~G~Ge~~~~~------------~---~~~~~e~~~~~~~ 65 (125)
T d1sjda2 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAGEGWGECVTMA------------G---PLYSSEYNDGAEH 65 (125)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSCEEEEECCCBS------------S---SSSSSCBHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEccCceEeeeeEEEEEEEecCceEEEEEEecC------------c---cccchhhhhhhhh
Confidence 78999888876 1232 345677888887775422 23332 1 1367778889999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.++..+.|.++ +.++.+...+.+.|..+.+ ...|.-|+.||+.-+.|+..++|||++||
T Consensus 66 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~a~aaid~AlwDl~ak~~~~Pl~~lLG 124 (125)
T d1sjda2 66 VLRHYLIPALL--AAEDITAAKVTPLLAKFKG-------HRMAKGALEMAVLDAELRAHERSFAAELG 124 (125)
T ss_dssp HHHHTHHHHHH--HSSSCCHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred hhhhccchhhc--CCCccCHHHHHHHHHHccC-------CcHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 99999999998 5778888888877765432 23477899999999999999999999997
|
| >d2chra2 d.54.1.1 (A:1-126) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Chlormuconate cycloisomerase species: Alcaligenes eutrophus [TaxId: 106590]
Probab=98.04 E-value=5.4e-05 Score=59.08 Aligned_cols=112 Identities=23% Similarity=0.215 Sum_probs=76.4
Q ss_pred CceeeEEEeEEe--------CCCCC----eeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN----PTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~----pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|..+.+= .|.|. +.|-|+|.++ |. +|--|+..+.. ..|.+.++..+.+.
T Consensus 1 MkI~~ie~~~~~~Pl~~p~~~s~~~~~~~~~v~v~i~~d-G~----------~G~GE~~~~~~---~~~~~~~~~~~~~~ 66 (126)
T d2chra2 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSE-GL----------VGVGEGGSVGG---PVWSAECAETIKII 66 (126)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBT-TB----------CCEEECCCSTT---TTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEeccccCceEeccceEeeeeEEEEEEEcC-Cc----------eEeEeecccCC---CccccchHHHHHHH
Confidence 788888887662 34332 3444555553 43 33333322221 14777888888999
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC-ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG-ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG-aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+++.+.|.|+ |.++.+..++-+.|... -.| .-|.-|+-+|+.-+-|+..++|||++||
T Consensus 67 l~~~l~p~li--g~~~~~~~~~~~~~~~~-------~~~~~~A~aaid~AlwDl~~K~~~~pl~~llG 125 (126)
T d2chra2 67 VERYLAPHLL--GTDAFNVSGALQTMARA-------VTGNASAKAAVEMALLDLKARALGVSIAELLG 125 (126)
T ss_dssp HHHHTHHHHT--TSCTTCHHHHHHHHHTT-------CSSCHHHHHHHHHHHHHHHHHHTTCCHHHHTT
T ss_pred HHHHhccccc--ccccccHHHHHHHhhhc-------cccchHHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 9999999999 67888876655554321 012 2367899999999999999999999998
|
| >d2gl5a2 d.54.1.1 (A:1-122) Putative dehydratase protein STM2273 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Putative dehydratase protein STM2273 species: Salmonella typhimurium [TaxId: 90371]
Probab=98.01 E-value=8.7e-06 Score=63.69 Aligned_cols=110 Identities=21% Similarity=0.208 Sum_probs=73.9
Q ss_pred CceeeEEEeEE--------eCCCCCeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGNPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFIN 70 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in 70 (299)
|+|++|..+.+ ..|+ ..|=|+|.|++|.. -|-+ |++. +....+..+.
T Consensus 1 MKI~~Ie~~~~~~p~~~~~~~~~--~~iiV~i~td~Gi~G~Ge~~~~~~---------------------~~~~~~~~~~ 57 (122)
T d2gl5a2 1 LKITSIEVFDCELKKRDQTMSSY--NPVLIRVNTDSGLSGIGEVGLAYG---------------------AGAKAGVGII 57 (122)
T ss_dssp CCEEEEEEEECCGGGTCGGGTTC--CCEEEEEEETTSCEEEEEESCSSS---------------------TTHHHHHHHH
T ss_pred CEEeEEEEEEEcCCCCCCccccc--eeEEEEEEECCCCEEEEeeccccc---------------------cchHHHHHHH
Confidence 89999988775 1222 24679999999976 5533 3321 1133455566
Q ss_pred HhHHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 71 NDIAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 71 ~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+.++|.|+ |+++.+-+.+-+.|.... .......+...|+-|+=+|+.=+.|+..++|||++||
T Consensus 58 ~~~~~~li--g~~~~~~e~~~~~l~~~~~~~~~~~~~~~~a~aaid~AlwDl~~K~~~~PL~~lLG 121 (122)
T d2gl5a2 58 RDLAPLIV--GEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLG 121 (122)
T ss_dssp HHHGGGTT--TSCTTCHHHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT
T ss_pred HHHHhhhc--ccccchhhHHHHHHhhhcccccccCCcccchHHHHHHHHHHHHHHHhCCCHHHHcC
Confidence 77999998 788888777776664321 0000001112377889999999999999999999998
|
| >d1nu5a2 d.54.1.1 (A:1-126) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Chlormuconate cycloisomerase species: Pseudomonas sp. p51 [TaxId: 65067]
Probab=98.01 E-value=4.8e-05 Score=59.36 Aligned_cols=111 Identities=16% Similarity=0.171 Sum_probs=77.3
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+| ..+|=|+|.+ +|.. .|-+ ..+.. ..|.+.++..+..
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~i~~-dG~~G~GE~-----------~~~~~---~~~~~~~~~~~~~ 65 (126)
T d1nu5a2 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEG-----------GSVGG---PTWGSESAETIKV 65 (126)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEE-----------CCSTT---TTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEecccCCCeEecceEEEeeeEEEEEEEc-CCeEEEeec-----------cccCC---CccccccHHHHHH
Confidence 78888886654 33433 3455566665 4543 3322 22111 1366777888888
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.++|.|+ |.++.+-.++-+.|... .|. .-|.-|+-+|+.-+-|+..++|||++||
T Consensus 66 ~i~~~~~p~l~--g~~~~~~~~~~~~~~~~~~~~-------~~A~aaid~AlwDl~~K~~~~pl~~llG 125 (126)
T d1nu5a2 66 IIDNYLAPLLV--GKDASNLSQARVLMDRAVTGN-------LSAKAAIDIALHDLKARALNLSIADLIG 125 (126)
T ss_dssp HHHHTHHHHHT--TSBTTCHHHHHHHHHHHCSSC-------HHHHHHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred HHHHHhhhhhh--hcCcccHHHHHHHhhhhhhcc-------chHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 89999999998 67888877777776542 221 2367899999999999999999999998
|
| >d1r0ma2 d.54.1.1 (A:6-132) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: N-acylamino acid racemase species: Deinococcus radiodurans [TaxId: 1299]
Probab=97.68 E-value=0.00012 Score=56.39 Aligned_cols=70 Identities=21% Similarity=0.283 Sum_probs=54.0
Q ss_pred ccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 57 YHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 57 ~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
|.+..+......+++.+.|.+. |.++.+..++-..+..+.+ -.-|.-|+.+|+.-+-|+..++|||++||
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~a~aaid~AlwDl~aK~~~~pl~~llG 126 (127)
T d1r0ma2 57 YREETIAGALDLLRGTFLPAIL--GQTFANPEAVSDALGSYRG-------NRMARAMVEMAAWDLWARTLGVPLGTLLG 126 (127)
T ss_dssp SSSCBHHHHHHHHHHTHHHHHT--TCEESSHHHHHHTTTTSCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHHT
T ss_pred cchhhhhhhhhhhhhhcccccc--cCChhhHHHHhhhhcccCC-------chHHHHHHHHHHHHHHHHHhCCcHHHHcC
Confidence 5566678888889999999998 6778776655554443321 12355789999999999999999999998
|
| >d1muca2 d.54.1.1 (A:4-130) Muconate-lactonizing enzyme (cis muconate cycloisomerase) {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Muconate-lactonizing enzyme (cis muconate cycloisomerase) species: Pseudomonas putida [TaxId: 303]
Probab=97.59 E-value=0.00091 Score=50.88 Aligned_cols=111 Identities=19% Similarity=0.155 Sum_probs=72.6
Q ss_pred ceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 2 PISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 2 ~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
.|++|..|.+ -+|.| ++.|-|+|.|++|.. .|-+ |.+.. .|.+........
T Consensus 2 ~I~~ie~~~~~~Pl~~p~~~s~~~~~~~~~~iV~i~td~G~~G~Ge~~~~~~~---------------~~~~~~~~~~~~ 66 (127)
T d1muca2 2 LIERIDAIIVDLPTIRPHKLAMHTMQQQTLVVLRVRCSDGVEGIGEATTIGGL---------------AYGYESPEGIKA 66 (127)
T ss_dssp BEEEEEEEEEEEEBCC---------CEEEEEEEEEEETTSCEEEEEEECSTTT---------------TTSSCCHHHHHH
T ss_pred EEeEEEEEEEeccccCceEccceeEeeeeEEEEEEEeCCCcEEEEEeeccccc---------------cccccchHHHHH
Confidence 3666666654 23333 467899999999976 5443 32211 133444666677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+.+.+.|.+. +.++.+...+-..+...-+ ...-|+-|+-+|+.=+.|+..|+|||++||
T Consensus 67 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~a~aaid~AlwDl~~K~~g~Pl~~lLG 126 (127)
T d1muca2 67 NIDAHLAPALI--GLAADNINAAMLKLDKLAK------GNTFAKSGIESALLDAQGKRLGLPVSELLG 126 (127)
T ss_dssp HHHHTHHHHHT--TSBTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTT
T ss_pred HHHhhhccccc--ccchhhHHHHHHHhhhhcc------cchHHHHHHHHHHHHHHHHHcCCCHHHHcC
Confidence 78888899997 6777776655444433311 112266799999999999999999999997
|
| >d2mnra2 d.54.1.1 (A:3-132) Mandelate racemase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Mandelate racemase species: Pseudomonas putida [TaxId: 303]
Probab=97.45 E-value=0.0018 Score=49.58 Aligned_cols=112 Identities=18% Similarity=0.186 Sum_probs=66.3
Q ss_pred CceeeEEEeEEe--------CCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.|.+= +|.|. +.|-|+|.|++|.. .|-+.+.. . +. .....
T Consensus 2 ~~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~i~t~~G~~G~Ge~~~~~-----------~-----~~----~~~~~ 61 (130)
T d2mnra2 2 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYT-----------P-----VA----LKSLK 61 (130)
T ss_dssp CBEEEEEEEEEEECCSSCEEETTEEECSEEEEEEEEEETTSCEEEEEEECSS-----------G-----GG----HHHHH
T ss_pred CEEEEEEEEEEEecccCCeeccceEEeeceEEEEEEEECCccceeeeeeecC-----------c-----cc----chhHH
Confidence 678888888763 23332 67889999999875 44332210 0 11 12223
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+.+.+.|.++ +.+.......+.+...+..-.. ...-..|.-|+=+|+.=+.|+..|+|||++||
T Consensus 62 ~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~aaid~AlwDl~~K~~~~Pl~~lLG 126 (130)
T d2mnra2 62 QLLDDMAAMIV--NEPLAPVSLEAMLAKRFCLAGY-TGLIRMAAAGIDMAAWDALGKVHETPLVKLLG 126 (130)
T ss_dssp HHHHHHHHHHT--TSBSCHHHHHHHHHHHTTTTCS-SHHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT
T ss_pred HHHHHHHHHhc--cCCCCHHHHHHHHHHHhhhhcc-CCchHHHHHHHHHHHHHHHHHHhCCCHHHHhC
Confidence 34455778886 4333333333433333321111 11112467899999999999999999999998
|
| >d1yeya2 d.54.1.1 (A:2-140) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: RTS beta protein species: Xanthomonas campestris pv. campestris [TaxId: 340]
Probab=97.39 E-value=0.00054 Score=54.27 Aligned_cols=71 Identities=17% Similarity=0.109 Sum_probs=50.0
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCC------CcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhh
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTE------NKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADL 137 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~------nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l 137 (299)
.+..+.+.+.|.|+ |.++.+-..+-+.|.. +.... ....+...|+-|+=+|+.=+.|+..|+|||+.|+++
T Consensus 61 ~~~~~~~~l~p~li--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~saIDiALWDl~gK~~~~Pl~~LL~~~ 138 (139)
T d1yeya2 61 VQTAAVAALAEHVV--GLSVDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAEL 138 (139)
T ss_dssp HHHHHHHTTHHHHT--TCBHHHHHHCHHHHHHHHHTCHHHHTTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHHTS
T ss_pred HHHHHHHHHHHHhh--CCCcccHHHHHHHHHHHhcccccccccCCcchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhhhc
Confidence 34456778999999 7888877665554432 22211 111122358999999999999999999999999853
|
| >d1tzza2 d.54.1.1 (A:1006-1145) Hypothetical protein Bll6730 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: Hypothetical protein Bll6730 species: Bradyrhizobium japonicum [TaxId: 375]
Probab=97.36 E-value=0.00076 Score=53.29 Aligned_cols=114 Identities=24% Similarity=0.255 Sum_probs=66.1
Q ss_pred CceeeEEEeEE----------eCCCCCeeEEEEEEECCCce-EEEeecCC-CCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQI----------FDSRGNPTVEVDLTTELGLF-RAAVPSGA-STGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~i----------lDsrG~pTvevev~~~~g~~-ra~~psGa-S~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|.+|+.+.| ..-...+++=|+|.|++|.. .+.+--|. +.+.+ . ....
T Consensus 1 mkIvdi~~~~vPl~~p~~~s~~~~~~~~~~lV~i~Td~G~~G~G~~G~g~~~~~~~-----------------~--~~~~ 61 (140)
T d1tzza2 1 VRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNSNGRY-----------------G--QGGL 61 (140)
T ss_dssp CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEECCTTSC-----------------C--CHHH
T ss_pred CeEEEEEEEEecCCCCcccccceeeceEEEEEEEEEeecccCcceEeeEecCCchh-----------------H--HHHH
Confidence 67877765544 12234567778888887643 22221111 11111 0 1235
Q ss_pred HHHhHHHHHhcCCCCccch----------HHHHHHHHhhcCCCCcccCCC--hhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 69 INNDIAPALLKESFEVTQQ----------KEIDEFMIKLDGTENKSKFGA--NAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ----------~~ID~~L~~lDgT~nks~lGa--NailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
+.+.++|.|+ |.++.+. ..+=+.|.. ......-|. .|+-|+-||+.=+.|+..|+|||++|+.
T Consensus 62 ~~~~~~~~li--g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~A~aaiDiAlWDl~gK~~g~Pl~~LLgg 136 (140)
T d1tzza2 62 IRERFASRIL--EADPKKLLNEAGDNLDPDKVWAAMMI---NEKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAE 136 (140)
T ss_dssp HHHTHHHHHH--TSCGGGSBCTTSSSBCHHHHHHHHTT---TCCSCCCSHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHH
T ss_pred HHHHHHHHHh--cccHhhHhhhcccccChHHHHHHHHh---hcccCCCchhHHHHHHHHHHHHHHHHHHcCCcHHHHhcc
Confidence 6778999999 5665432 222222322 222222232 3788999999999999999999999985
Q ss_pred hh
Q psy12655 137 LA 138 (299)
Q Consensus 137 l~ 138 (299)
.+
T Consensus 137 ~~ 138 (140)
T d1tzza2 137 RH 138 (140)
T ss_dssp HT
T ss_pred cc
Confidence 44
|
| >d1jdfa2 d.54.1.1 (A:5-137) D-glucarate dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: D-glucarate dehydratase species: Escherichia coli [TaxId: 562]
Probab=97.24 E-value=0.0017 Score=50.59 Aligned_cols=107 Identities=14% Similarity=0.220 Sum_probs=67.0
Q ss_pred ceeeEEEeEE-------eCCCC--Cee---EEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 2 PISKIHARQI-------FDSRG--NPT---VEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 2 ~I~~v~ar~i-------lDsrG--~pT---vevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
+|++|+..-| +.+.| .|. +=|+|.|++|.. .+-++.+ ..+..++
T Consensus 5 ~It~i~~~~v~~~~~~~~~~~~~~~~~~~~~iV~l~t~~Gi~G~Ge~~~~---------------------~~~~~~~-- 61 (133)
T d1jdfa2 5 VVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGG---------------------EKIRKTL-- 61 (133)
T ss_dssp BEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECC---------------------HHHHHHH--
T ss_pred eEEEEEEEEecccCcccccCCCCcCCccceEEEEEEECCCCEEEEEecCc---------------------HHHHHHH--
Confidence 5777776666 32222 222 338899999875 5544421 0122223
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhhc---CCCC----ccc--CCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKLD---GTEN----KSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD---gT~n----ks~--lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+.+.|.|+ |.++.+...+.+.|.... +... ... .-..|+.|+-+|+.=+.|+..|+|||+.||
T Consensus 62 --~~~~~~l~--g~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~A~aaid~AlwDl~gK~~g~Pl~~LLG 133 (133)
T d1jdfa2 62 --EDAIPLVV--GKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLG 133 (133)
T ss_dssp --HHHHHHHT--TCBGGGHHHHHHHHHHHTGGGGTTCSCSSSSCCCCHHHHHHHHHHHHHHHHHHHHTSBGGGGST
T ss_pred --Hhhhhhhc--CCChhhHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHcC
Confidence 34789998 788888877777665421 1000 001 112378999999999999999999999875
|
| >d1bqga2 d.54.1.1 (A:12-143) D-glucarate dehydratase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: D-glucarate dehydratase species: Pseudomonas putida [TaxId: 303]
Probab=97.05 E-value=0.0029 Score=49.30 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=42.6
Q ss_pred hHHHHHhcCCCCccchHHHHHHHHhh-cCCCC------cccC--CChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 72 DIAPALLKESFEVTQQKEIDEFMIKL-DGTEN------KSKF--GANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~n------ks~l--GaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+.|.++ |.++.+...|-+.|.+. ..... .... -..|+-|+-+|+.=+.|+..++|||+.||
T Consensus 62 ~~~~~~i--g~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~A~aaid~AlwDl~gK~~g~Pl~~LLG 132 (132)
T d1bqga2 62 DARHLLI--NQSIGNYQSLLNKVRNAFADRDVGGRGLQTFDLRIAVHAVTAVESALLDLLGQHLQVPVAALLG 132 (132)
T ss_dssp TTHHHHB--TCBGGGHHHHHHHHHHHTCC------------CHHHHHHHHHHHHHHHHHHHHHHTCBGGGGST
T ss_pred Hhhhhhc--CcChHHHHHHHHHHHHHhcccCcccccccccccchHHHHHHHHHHHHHHHHHHHcCCcHHHHcC
Confidence 4778998 78888877766666442 21110 0011 12378899999999999999999999875
|
| >d1kkoa2 d.54.1.1 (A:1-160) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Probab=92.10 E-value=0.88 Score=36.36 Aligned_cols=102 Identities=22% Similarity=0.215 Sum_probs=69.9
Q ss_pred eEEEEEEECCCce-EEEeecCCCC--cceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGAST--GIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS~--G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
+|-|.+++++|.. .+-|-+-.-. |-++. .|. -..=+..+++.|.|.|+ |.|++.-++.=+.+-
T Consensus 52 sisV~l~L~dG~va~GDCaaVqySGagGRDP---------LF~---A~~~i~~~e~~v~p~L~--g~d~~~Fr~~A~~~d 117 (160)
T d1kkoa2 52 CVSVQLILENGAVAVGDCAAVQYSGAGGRDP---------LFL---AEHFIPFLNDHIKPLLE--GRDVDAFLPNARFFD 117 (160)
T ss_dssp EEEEEEEETTSCEEEEEECCCTTTTSTTCCC---------CCC---HHHHHHHHHHHTHHHHT--TCBCSCSHHHHHHHH
T ss_pred EEEEEEEeCCCCEEEeeehheeecCCCCCCc---------ccc---HHHHHHHHHHhhhHHHh--CCcHHHHHHHHHHHh
Confidence 5789999999987 6665543222 22222 233 34457778999999999 678887766555554
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
.+ +-+..+|-.-.=.+||-|+..|+|+..+.-.-+-|++
T Consensus 118 ~~--~~~g~~LHtAiRYGvSQALL~A~A~a~r~tmaeVi~~ 156 (160)
T d1kkoa2 118 KL--RIDGNLLHTAVRYGLSQALLDATALASGRLKTEVVCD 156 (160)
T ss_dssp HC--EETTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred hc--ccCCCchhHHHHHhHHHHHHHHHHHHcCccHHHHHHH
Confidence 33 1223466655669999999999999998877776664
|
| >d1jpdx1 c.1.11.2 (X:114-321) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: L-Ala-D/L-Glu epimerase species: Escherichia coli [TaxId: 562]
Probab=91.23 E-value=0.082 Score=43.77 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=19.4
Q ss_pred cCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 272 LPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 272 ~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+|.+|.+.+ .+.+++|++.+||||+.
T Consensus 68 ~s~~~A~~~-~~~l~~~~l~~iEeP~~ 93 (208)
T d1jpdx1 68 WRAEGLAAR-CQLLADLGVAMLEQPLP 93 (208)
T ss_dssp CCSTTHHHH-HHHHHHTTCCEEECCSC
T ss_pred cchhHHHHH-HHHHHhccccccCccCC
Confidence 455665554 45677899999999986
|
| >d1kcza2 d.54.1.1 (A:1-160) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Enolase N-terminal domain-like superfamily: Enolase N-terminal domain-like family: Enolase N-terminal domain-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Probab=89.94 E-value=2.1 Score=34.09 Aligned_cols=102 Identities=23% Similarity=0.290 Sum_probs=69.4
Q ss_pred eEEEEEEECCCce-EEEeecCCCC--cceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHH
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGAST--GIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMI 95 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS~--G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~ 95 (299)
+|-|.+++++|.. .+-|-+-.-. |-++. .|. -..=+..+++.|.|.|+ |.|++.-++.=+.+-
T Consensus 52 sisV~l~L~dG~va~GDCaaVqySGagGRDP---------LF~---A~~~i~~~e~~v~p~L~--g~d~~~Fr~~a~~~d 117 (160)
T d1kcza2 52 SISVLLVLEDGQVAHGDCAAVQYSGAGGRDP---------LFL---AKDFIPVIEKEIAPKLI--GREITNFKPMAEEFD 117 (160)
T ss_dssp EEEEEEEETTSCEEEEEECCCTTTTSTTSCS---------CCC---HHHHHHHHHHHTHHHHT--TCBCCCHHHHHHHHH
T ss_pred EEEEEEEeCCCCEEEeeehheeecCCCCCCc---------ccc---HHHHHHHHHHhhhHHHh--CCcHHHHHHHHHHHh
Confidence 6889999999987 6665543222 22222 233 34457778899999999 678887765544443
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
++ +.+..+|-.-.=.+||-|+..|+|+..+.-.-+-|++
T Consensus 118 ~~--~~~g~~LHtAiRYGvSQALL~A~A~a~r~tmaeVi~~ 156 (160)
T d1kcza2 118 KM--TVNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRD 156 (160)
T ss_dssp HC--EETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred hc--ccCCcchhHHHHHhHHHHHHHHHHHHcCCcHHHHhHh
Confidence 32 1233466655669999999999999998877776653
|
| >d1rvka1 c.1.11.2 (A:127-381) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Hypothetical protein Atu3453 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=85.58 E-value=2.6 Score=34.81 Aligned_cols=56 Identities=23% Similarity=0.318 Sum_probs=38.9
Q ss_pred CChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCC
Q psy12655 218 LDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297 (299)
Q Consensus 218 ~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~ 297 (299)
.+.++-++.+...=+..| +++.|.+|+- ..+|.+|-+.+... +++|.|.+||+|+
T Consensus 55 ~~~~~d~~~v~avR~~~G--~~~~l~vDaN----------------------~~~~~~~A~~~~~~-l~~~~l~~iEeP~ 109 (255)
T d1rvka1 55 PDVKMDLKACAAVREAVG--PDIRLMIDAF----------------------HWYSRTDALALGRG-LEKLGFDWIEEPM 109 (255)
T ss_dssp CCHHHHHHHHHHHHHHHC--TTSEEEEECC----------------------TTCCHHHHHHHHHH-HHTTTCSEEECCS
T ss_pred cCHHHHHHHHHHHHHHcC--Cccceecccc----------------------cccccchhhhhhhh-cccchhhhhcCCc
Confidence 345666666655555556 4688999961 23567787776555 5889999999998
Q ss_pred C
Q psy12655 298 L 298 (299)
Q Consensus 298 ~ 298 (299)
+
T Consensus 110 ~ 110 (255)
T d1rvka1 110 D 110 (255)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: L-Ala-D/L-Glu epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=85.57 E-value=0.62 Score=38.39 Aligned_cols=78 Identities=15% Similarity=0.213 Sum_probs=45.7
Q ss_pred cCCCCCChHHHHHHHHHHHHHcccc-cceEEEe-eccccc-cc--------cCCceeeecCCCCCCCCCccCHHHHHHHH
Q psy12655 213 FAPNILDNKEGLRLIVEAIEKAGYT-GKVEIGM-DVAASE-FF--------KEGQYDLDFKNPNSDKSQWLPADKLTALY 281 (299)
Q Consensus 213 fap~~~~~e~aL~ll~eAi~~ag~~-~~i~ial-D~AAse-~~--------~~g~Y~~~fk~~~~~~~~~~t~~elid~y 281 (299)
|...++++|+.++.+++++++ ||+ -+|+++- |.+..- .. ++-...++ ....+|.++.+++.
T Consensus 9 ~t~~~~~pe~~~~~a~~~~~~-G~~~~Kikig~~~~~~d~~~i~~ir~~~g~~~~i~vD-------~N~~~~~~~a~~~~ 80 (234)
T d1jpma1 9 YTVSVNSPEEMAADAENYLKQ-GFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLD-------ANQGWRPKEAVTAI 80 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHT-TCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEE-------CTTCSCHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHHcCchhhhhhh-------cccccchHHHHHHH
Confidence 344566777777777777764 776 3455543 332210 00 11223443 22347888988887
Q ss_pred HHHHh-cCCeeEeecCCC
Q psy12655 282 QEFIK-EYPIVSIEDPML 298 (299)
Q Consensus 282 ~~l~~-~yPIvsiEDp~~ 298 (299)
+.|-. ++-|.++|+|+.
T Consensus 81 ~~le~~~~~i~~~EeP~~ 98 (234)
T d1jpma1 81 RKMEDAGLGIELVEQPVH 98 (234)
T ss_dssp HHHHHTTCCEEEEECCSC
T ss_pred HHHHhccCceeeecCCcc
Confidence 77754 355899999985
|
| >d1muca1 c.1.11.2 (A:131-372) Muconate-lactonizing enzyme {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Muconate-lactonizing enzyme species: Pseudomonas putida [TaxId: 303]
Probab=82.87 E-value=1.1 Score=37.04 Aligned_cols=55 Identities=20% Similarity=0.305 Sum_probs=40.5
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++-++.+...-+..| .++.|.+|+ + ..+|.++-+++.+.| ++|+|.+||||+.
T Consensus 44 ~~~~Di~~i~~ir~~~g--~~~~l~vDa--------------------N--~~~~~~~A~~~~~~l-~~~~i~~iEeP~~ 98 (242)
T d1muca1 44 PVEQDLKHVVTIKRELG--DSASVRVDV--------------------N--QYWDESQAIRACQVL-GDNGIDLIEQPIS 98 (242)
T ss_dssp CHHHHHHHHHHHHHHHG--GGSEEEEEC--------------------T--TCBCHHHHHHHHHHH-HHTTCCCEECCBC
T ss_pred CHHHHHHHHHHHHHHhC--CCCEEEEec--------------------C--CCCcHHHHHHHHHHh-hhhhHHHhhcchh
Confidence 46777777777666666 468888885 1 235678888887666 6899999999984
|
| >d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Pseudomonas sp. p51 [TaxId: 65067]
Probab=81.93 E-value=1.4 Score=36.58 Aligned_cols=56 Identities=16% Similarity=0.243 Sum_probs=40.9
Q ss_pred CChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCC
Q psy12655 218 LDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297 (299)
Q Consensus 218 ~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~ 297 (299)
.++++-++.+...-+..| +++.|.+|+- ..+|.++-+.+...| ++|++.++|+|+
T Consensus 43 ~~~~~Di~~v~~ir~~~g--~~~~l~vDaN----------------------~~~~~~~A~~~~~~l-~~~~~~~iEeP~ 97 (243)
T d1nu5a1 43 RTPAQDLEHIRSIVKAVG--DRASVRVDVN----------------------QGWDEQTASIWIPRL-EEAGVELVEQPV 97 (243)
T ss_dssp SCHHHHHHHHHHHHHHHG--GGCEEEEECT----------------------TCCCHHHHHHHHHHH-HHHTCCEEECCS
T ss_pred CCHHHHHHHHHHHHHHhC--cccceEEECC----------------------CCccchhHHHHHHHh-cchhhhhhhhhh
Confidence 356777888877777776 4688888851 235677877666555 789999999998
Q ss_pred C
Q psy12655 298 L 298 (299)
Q Consensus 298 ~ 298 (299)
.
T Consensus 98 ~ 98 (243)
T d1nu5a1 98 P 98 (243)
T ss_dssp C
T ss_pred h
Confidence 5
|
| >d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Listeria innocua [TaxId: 1642]
Probab=81.11 E-value=0.66 Score=38.55 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=19.8
Q ss_pred ccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 271 WLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 271 ~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+|.++.+ ++. -+++|.+.+||+|+.
T Consensus 67 ~~~~~~a~-~~~-~l~~~~~~wiEeP~~ 92 (244)
T d1wufa1 67 AYNREDFL-LLK-ELDQYDLEMIEQPFG 92 (244)
T ss_dssp CCCGGGHH-HHH-TTGGGTCSEEECCSC
T ss_pred cccchhhh-hhh-cccccchhhhcCccc
Confidence 45666765 554 479999999999985
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| >d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: RTS beta protein species: Xanthomonas campestris pv. campestris [TaxId: 340]
Probab=81.07 E-value=0.51 Score=39.59 Aligned_cols=71 Identities=21% Similarity=0.348 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHHHHcccc-cceEEEeecccc--------ccc-cCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC
Q psy12655 219 DNKEGLRLIVEAIEKAGYT-GKVEIGMDVAAS--------EFF-KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY 288 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~-~~i~ialD~AAs--------e~~-~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y 288 (299)
++++..+.+++++++ ||+ -+|++|-|+... +-+ ++-+-.++ ....+|.++-+.+...| ++|
T Consensus 15 s~ee~~~~a~~~~~~-Gf~~~KikvG~~~~~di~~v~~vr~~~g~~~~l~vD-------aN~~~~~~~A~~~~~~l-~~~ 85 (252)
T d1yeya1 15 SDEKLVRLAKEAVAD-GFRTIKLKVGANVQDDIRRCRLARAAIGPDIAMAVD-------ANQRWDVGPAIDWMRQL-AEF 85 (252)
T ss_dssp -CHHHHHHHHHHHHT-TCSEEEEECCSCHHHHHHHHHHHHHHHCSSSEEEEE-------CTTCCCHHHHHHHHHTT-GGG
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHHHHHhCCCceEeec-------cccCcchHHHHHHHHhh-hhc
Confidence 567888888888765 887 466666543211 111 12233343 23457888888877655 789
Q ss_pred CeeEeecCCC
Q psy12655 289 PIVSIEDPML 298 (299)
Q Consensus 289 PIvsiEDp~~ 298 (299)
++.+||||+.
T Consensus 86 ~~~~iEeP~~ 95 (252)
T d1yeya1 86 DIAWIEEPTS 95 (252)
T ss_dssp CCSCEECCSC
T ss_pred CceeecCCcc
Confidence 9999999985
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| >d1tzza1 c.1.11.2 (A:1146-1392) Hypothetical protein Bll6730 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Hypothetical protein Bll6730 species: Bradyrhizobium japonicum [TaxId: 375]
Probab=80.34 E-value=2 Score=35.51 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=39.7
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++-++.|...-+..| .++.|.+|+- ..+|.+|-+++ .+.+++|+|.+||||+.
T Consensus 47 ~~~~di~~v~~vr~~~g--~~~~l~vDan----------------------~~~~~~~Ai~~-~~~l~~~~i~wiEeP~~ 101 (247)
T d1tzza1 47 PIEEDRMRIEAVLEEIG--KDAQLAVDAN----------------------GRFNLETGIAY-AKMLRDYPLFWYEEVGD 101 (247)
T ss_dssp CHHHHHHHHHHHHHHHT--TTCEEEEECT----------------------TCCCHHHHHHH-HHHHTTSCCSEEECCSC
T ss_pred CHHHHHHHHHHHHHhcc--CCceEEeccc----------------------ccccchhHHHH-Hhhcchhhhhhhccccc
Confidence 56777777777666666 4688888862 22466776764 46677999999999985
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