Psyllid ID: psy12823
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 295 | 2.2.26 [Sep-21-2011] | |||||||
| O15442 | 326 | Metallophosphoesterase do | yes | N/A | 0.915 | 0.828 | 0.44 | 2e-65 | |
| Q91ZG2 | 326 | Metallophosphoesterase do | yes | N/A | 0.915 | 0.828 | 0.44 | 3e-65 | |
| B1WBP0 | 294 | Metallophosphoesterase MP | no | N/A | 0.922 | 0.925 | 0.440 | 2e-63 | |
| Q5REB1 | 294 | Metallophosphoesterase MP | yes | N/A | 0.922 | 0.925 | 0.440 | 2e-63 | |
| Q15777 | 294 | Metallophosphoesterase MP | no | N/A | 0.922 | 0.925 | 0.440 | 2e-63 | |
| Q9CZJ0 | 294 | Metallophosphoesterase MP | no | N/A | 0.922 | 0.925 | 0.437 | 3e-63 | |
| Q22306 | 396 | UPF0046 protein T07D4.2 O | no | N/A | 0.949 | 0.707 | 0.434 | 7e-63 | |
| Q18161 | 281 | UPF0046 protein C25E10.12 | no | N/A | 0.915 | 0.960 | 0.447 | 5e-62 | |
| Q21268 | 290 | UPF0046 protein K07C11.7 | no | N/A | 0.738 | 0.751 | 0.4 | 8e-42 | |
| Q5B5P1 | 1041 | Probable rhamnogalacturon | yes | N/A | 0.586 | 0.166 | 0.358 | 2e-28 |
| >sp|O15442|MPPD1_HUMAN Metallophosphoesterase domain-containing protein 1 OS=Homo sapiens GN=MPPED1 PE=2 SV=3 | Back alignment and function desciption |
|---|
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 175/300 (58%), Gaps = 30/300 (10%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQV----------DPKKVRVVCMSDT 50
+ I + + NPT A+ + +Q QPP Q+ P R VC+SDT
Sbjct: 43 LIIEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDT 98
Query: 51 HSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDP 110
HS T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD
Sbjct: 99 HSRTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQ 156
Query: 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYG 170
F M + + P S + N++ LTNC YLQD E + G
Sbjct: 157 EF-------------MADLIKQDFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRG 203
Query: 171 IKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAG 229
+ YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R G
Sbjct: 204 FRIYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVG 263
Query: 230 CVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
CVELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 264 CVELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 323
|
May have metallophosphoesterase activity (in vitro). Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|Q91ZG2|MPPD1_MOUSE Metallophosphoesterase domain-containing protein 1 OS=Mus musculus GN=Mpped1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (634), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 175/300 (58%), Gaps = 30/300 (10%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQV----------DPKKVRVVCMSDT 50
+ I + + NPT A+ + +Q QPP Q+ P R VC+SDT
Sbjct: 43 LIIEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDT 98
Query: 51 HSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDP 110
HS T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD
Sbjct: 99 HSRTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQ 156
Query: 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYG 170
F M + + P S + N++ LTNC YLQD E + G
Sbjct: 157 EF-------------MADLIKQDFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRG 203
Query: 171 IKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAG 229
+ YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R G
Sbjct: 204 FRIYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVG 263
Query: 230 CVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
CVELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 264 CVELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 323
|
May have metallophosphoesterase activity (in vitro). Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|B1WBP0|MPPD2_RAT Metallophosphoesterase MPPED2 OS=Rattus norvegicus GN=Mpped2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 175/302 (57%), Gaps = 30/302 (9%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDP---------KKVRVVCMSDT 50
++I + + NPT A+ + +Q QPP VDP R VC+SDT
Sbjct: 11 VTITVDEYSSNPTQAFTHYNINQS----RFQPPHVHMVDPIPYDTPKPAGHTRFVCISDT 66
Query: 51 HSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDP 110
HS T I+ +P GDI +H GDFT G EV +FN W+GNLP+++K+VIAGNHEL+FD
Sbjct: 67 HSRTDGIQ--MPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDK 124
Query: 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYG 170
F M + + P S + N++ LTN YLQD E + G
Sbjct: 125 EF-------------MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKG 171
Query: 171 IKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAG 229
+ YG PW P F W FN+PRG++ L KW IP TD+L++H PP+G D L R G
Sbjct: 172 FRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVG 231
Query: 230 CVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
CVELL TVQ+RV+PK HVFG +HEGYG +DG +INASTC +++ PTNPPI+FD+ P
Sbjct: 232 CVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTNPPIIFDLPNP 291
Query: 290 PG 291
G
Sbjct: 292 QG 293
|
Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q5REB1|MPPD2_PONAB Metallophosphoesterase MPPED2 OS=Pongo abelii GN=MPPED2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 175/302 (57%), Gaps = 30/302 (9%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDP---------KKVRVVCMSDT 50
++I + + NPT A+ + +Q QPP VDP R VC+SDT
Sbjct: 11 VTITVDEYSSNPTQAFTHYNINQS----RFQPPHVHMVDPIPYDTPKPAGHTRFVCISDT 66
Query: 51 HSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDP 110
HS T I+ +P GDI +H GDFT G EV +FN W+GNLP+++K+VIAGNHEL+FD
Sbjct: 67 HSRTDGIQ--MPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDK 124
Query: 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYG 170
F M + + P S + N++ LTN YLQD E + G
Sbjct: 125 EF-------------MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKG 171
Query: 171 IKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAG 229
+ YG PW P F W FN+PRG++ L KW IP D+L++H PP+G D L R G
Sbjct: 172 FRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGIDILMTHGPPLGFRDWVPKELQRVG 231
Query: 230 CVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
CVELL TVQ+RV+PK HVFG +HEGYGI +DG +INASTC +++ PTNPPI+FD+ P
Sbjct: 232 CVELLNTVQRRVRPKLHVFGGIHEGYGIMTDGYTTYINASTCTVSFQPTNPPIIFDLPNP 291
Query: 290 PG 291
G
Sbjct: 292 QG 293
|
Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q15777|MPPD2_HUMAN Metallophosphoesterase MPPED2 OS=Homo sapiens GN=MPPED2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 175/302 (57%), Gaps = 30/302 (9%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDP---------KKVRVVCMSDT 50
++I + + NPT A+ + +Q QPP VDP R VC+SDT
Sbjct: 11 VTITVDEYSSNPTQAFTHYNINQS----RFQPPHVHMVDPIPYDTPKPAGHTRFVCISDT 66
Query: 51 HSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDP 110
HS T I+ +P GDI +H GDFT G EV +FN W+GNLP+++K+VIAGNHEL+FD
Sbjct: 67 HSRTDGIQ--MPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDK 124
Query: 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYG 170
F M + + P S + N++ LTN YLQD E + G
Sbjct: 125 EF-------------MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKG 171
Query: 171 IKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAG 229
+ YG PW P F W FN+PRG++ L KW IP D+L++H PP+G D L R G
Sbjct: 172 FRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGIDILMTHGPPLGFRDWVPKELQRVG 231
Query: 230 CVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
CVELL TVQ+RV+PK HVFG +HEGYGI +DG +INASTC +++ PTNPPI+FD+ P
Sbjct: 232 CVELLNTVQRRVRPKLHVFGGIHEGYGIMTDGYTTYINASTCTVSFQPTNPPIIFDLPNP 291
Query: 290 PG 291
G
Sbjct: 292 QG 293
|
Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q9CZJ0|MPPD2_MOUSE Metallophosphoesterase MPPED2 OS=Mus musculus GN=Mpped2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 175/302 (57%), Gaps = 30/302 (9%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDP---------KKVRVVCMSDT 50
++I + + NPT A+ + +Q QPP VDP R VC+SDT
Sbjct: 11 VTITVDEYSSNPTQAFTHYNINQS----RFQPPHVHMVDPIPYDTPKPAGHTRFVCISDT 66
Query: 51 HSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDP 110
HS T I+ +P GDI +H GDFT G EV +FN W+GNLP+++K+VIAGNHEL+FD
Sbjct: 67 HSRTDGIQ--MPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDK 124
Query: 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYG 170
F M + + P S + N++ LTN YLQD E + G
Sbjct: 125 EF-------------MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKG 171
Query: 171 IKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAG 229
+ YG PW P F W FN+PRG++ L KW IP D+L++H PP+G D L R G
Sbjct: 172 FRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGIDILMTHGPPLGFRDWVPKELQRVG 231
Query: 230 CVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
CVELL TVQ+R++PK HVFG +HEGYGI +DG +INASTC +++ PTNPPI+FD+ P
Sbjct: 232 CVELLNTVQRRIRPKLHVFGGIHEGYGIMTDGYTTYINASTCTVSFQPTNPPIIFDLPNP 291
Query: 290 PG 291
G
Sbjct: 292 QG 293
|
Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q22306|YW12_CAEEL UPF0046 protein T07D4.2 OS=Caenorhabditis elegans GN=T07D4.2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 240 bits (613), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 164/288 (56%), Gaps = 8/288 (2%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFNIP 62
+ +H T++PT AW+ L + V + T V P VR VC+ TH I +P
Sbjct: 96 VSLHQYTEDPTLAWEMLKEKRPVKPVRQMRLDTPVKPDHVRFVCIGCTHGEQFDIS-KLP 154
Query: 63 DGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSP 122
GD+ + AGDFT CG EV FN +G L + +K+VI GNHE +FD TF +
Sbjct: 155 PGDVLLVAGDFTSCGLPNEVHNFNKLLGKLKYSYKVVIGGNHECTFDDTFL----KLKQE 210
Query: 123 SRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEF 182
S + + L + A+ D L+N YL+D L+GI YGTPWQP+
Sbjct: 211 SEPKEMALKQALLSAIHSDSKGGISAK---DLLSNAIYLEDNVIELFGITIYGTPWQPKV 267
Query: 183 CKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVK 242
WAFN+ RG+ L KW IPA DVL++HTPP+GHGD+ G R GC ELL TV +RV+
Sbjct: 268 DNWAFNLSRGQQLLDKWNLIPAGVDVLLTHTPPLGHGDMMNNGQRMGCAELLNTVFKRVR 327
Query: 243 PKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPP 290
PKYHVFGH+HEGYG T+DG FIN C+ N N P++FDI + P
Sbjct: 328 PKYHVFGHIHEGYGCTTDGYTKFINCCMCNENLDLKNEPVIFDIPVHP 375
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q18161|YBPT_CAEEL UPF0046 protein C25E10.12 OS=Caenorhabditis elegans GN=C25E10.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (606), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 168/297 (56%), Gaps = 27/297 (9%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIK-INVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFNI 61
+ + PL+ P WK+ +V + I T + KVR VC+SDTH I I
Sbjct: 6 VLVDPLSSKPIDCWKKYVKQGRVCEPIKPMRLDTPIFENKVRFVCISDTHEKLHEILPYI 65
Query: 62 PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRS 121
PDGD+ IH+GDFT CG EV +FN IG+LPHKHK+VIAGNHEL F+ +S +
Sbjct: 66 PDGDVLIHSGDFTNCGDIGEVIKFNAEIGSLPHKHKIVIAGNHELGFEDG--EEMSERQL 123
Query: 122 PSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPE 181
M IN+ L L+NCTYL D+ YG+K YG PW
Sbjct: 124 AGLNMLGINKAYEL-------------------LSNCTYLCDKSYEAYGLKIYGAPWH-S 163
Query: 182 FCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCC----TGLRAGCVELLTTV 237
++F RG+ L KW IPA DVL++HTPP+GHGD G+ GC ELL TV
Sbjct: 164 MPGYSFFRQRGQKILHKWNQIPAKIDVLMTHTPPLGHGDFNAWDKMDGILCGCAELLNTV 223
Query: 238 QQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTK 294
+QRVKPKYHVFGHVH+ +G+T++G FINA+ CD PI+FDI LPPG TK
Sbjct: 224 EQRVKPKYHVFGHVHQKHGVTTNGETTFINAALCDHKLRSAYDPIIFDIPLPPGKTK 280
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q21268|YMSO_CAEEL UPF0046 protein K07C11.7 OS=Caenorhabditis elegans GN=K07C11.7 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 171 bits (432), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 138/245 (56%), Gaps = 27/245 (11%)
Query: 42 VRVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIA 101
++VVC+SDTH ++ +PDGD+ IHAGDFT G EE+ +FN + PHK+KLV+A
Sbjct: 67 LKVVCISDTHEQLHNV--TVPDGDVLIHAGDFTNNGKREELIKFNEEMTRFPHKYKLVVA 124
Query: 102 GNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYL 161
GNHEL FD H N+ R + + + + LTN TYL
Sbjct: 125 GNHELGFD-----------------HDENQ-----GERQDADKGLGTEDGYNILTNVTYL 162
Query: 162 QDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDL 221
QD+ + G+ F+G+ + P + F R E W+ +P DT+VLI+HTPP+G+ D
Sbjct: 163 QDKGVTIDGVTFFGSSYHP-LRGFPFYRNRAEQLAECWKAVPNDTNVLITHTPPLGYLDQ 221
Query: 222 CCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPP 281
R GC +LL TV+ R++P YH+FGHVHE +G+ S+G FINA+ C+ P
Sbjct: 222 FGDE-RWGCRDLLKTVE-RIQPAYHIFGHVHEQHGVLSNGNTTFINAAQCNKGNQIQTRP 279
Query: 282 IVFDI 286
IVF I
Sbjct: 280 IVFYI 284
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q5B5P1|RGLC_EMENI Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 112/223 (50%), Gaps = 50/223 (22%)
Query: 42 VRVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIA 101
VRVVC+SDTH+ P N+PDGDI IHAGD T G +EE+ + W+ + PH++K+VIA
Sbjct: 777 VRVVCVSDTHNTKP----NLPDGDILIHAGDLTESGTKEELEKQIYWLDSQPHRYKIVIA 832
Query: 102 GNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYL 161
GNHE D + H NE T+ + YL
Sbjct: 833 GNHETFLDRNYHS------------HHGNERVTMDWK------------------SLIYL 862
Query: 162 QDEERIL-----YGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPI 216
++ IL + +K +G+P+ P+ AF PR + + W++IP DTD+L++H PP
Sbjct: 863 ENTSAILDLGAGHQLKVFGSPYTPKHGNGAFQYPRTDT--TTWEEIPKDTDLLVTHGPPK 920
Query: 217 GH---GDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYG 256
H G L C LR E+ +P HVFGH+H GYG
Sbjct: 921 AHLDLGHLGCRVLRQALWEM------ESRPLLHVFGHIHGGYG 957
|
Pectinolytic enzymes consist of four classes of enzymes: pectine lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Degrades the rhamnogalacturonan I (RG-I) backbone of pectin. Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 4 EC: . EC: 2 EC: . EC: 2 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 295 | ||||||
| 322785974 | 299 | hypothetical protein SINV_05770 [Solenop | 0.996 | 0.983 | 0.714 | 1e-129 | |
| 307207319 | 299 | Metallophosphoesterase domain-containing | 0.996 | 0.983 | 0.721 | 1e-129 | |
| 350406245 | 299 | PREDICTED: metallophosphoesterase domain | 0.983 | 0.969 | 0.717 | 1e-129 | |
| 332025600 | 299 | Metallophosphoesterase domain-containing | 0.996 | 0.983 | 0.714 | 1e-129 | |
| 340716234 | 299 | PREDICTED: metallophosphoesterase domain | 0.983 | 0.969 | 0.714 | 1e-128 | |
| 307166004 | 299 | Metallophosphoesterase domain-containing | 0.996 | 0.983 | 0.708 | 1e-128 | |
| 380013517 | 299 | PREDICTED: LOW QUALITY PROTEIN: metallop | 0.986 | 0.973 | 0.711 | 1e-128 | |
| 383853381 | 299 | PREDICTED: metallophosphoesterase domain | 0.996 | 0.983 | 0.708 | 1e-127 | |
| 328776089 | 299 | PREDICTED: metallophosphoesterase domain | 0.986 | 0.973 | 0.705 | 1e-127 | |
| 158292973 | 298 | AGAP004891-PA [Anopheles gambiae str. PE | 0.993 | 0.983 | 0.719 | 1e-126 |
| >gi|322785974|gb|EFZ12590.1| hypothetical protein SINV_05770 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 252/298 (84%), Gaps = 4/298 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT +PTAAW+ELS QKVIKIN + P T+ K+RVVCMSDTHSLTP+I+F+
Sbjct: 1 MKIAIHPLTADPTAAWRELSQHQKVIKINAKLPTTEAPSNKLRVVCMSDTHSLTPYIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPHKHK+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPAGDVFIHAGDFTKCGSLQEVIEFNNWIGNLPHKHKIVIAGNHELSFDPTFTHPFSVHT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S H ++++IPTLG+ +D+L EA+K N++D LTNCTYL+D E ++GIK YGT
Sbjct: 121 SGDHQKHTGTSILDDIPTLGMSKDTLAEAIKTTNVKDYLTNCTYLEDSETTVHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDL CTG+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLACTGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTK 294
VQ RVKPKYHVFGH+HEGYGI+SDG+II+INASTCDLNYLP+N PIVFDI LP G+ K
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYINASTCDLNYLPSNSPIVFDITLPSGIEK 298
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307207319|gb|EFN85069.1| Metallophosphoesterase domain-containing protein 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/298 (72%), Positives = 252/298 (84%), Gaps = 4/298 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT +PTAAW ELS QKV+KIN + P T+ K+RVVCMSDTHSLTP+I F+
Sbjct: 1 MKIGIHPLTADPTAAWCELSQHQKVVKINTKLPTTEAPSDKLRVVCMSDTHSLTPYINFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPHKHK+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPTGDVFIHAGDFTKCGSLQEVIEFNNWIGNLPHKHKIVIAGNHELSFDPTFTHPFSVHT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S H +++ IPTLG+ +D+L EA+K N++D LTNCTYL+D E L+GIK YGT
Sbjct: 121 SGDHQKHTGTSILDNIPTLGMSKDTLAEAIKTTNVKDYLTNCTYLEDSEITLHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTK 294
VQ RVKPKYHVFGH+HEGYGI+SDG+II+INASTCDLNYLP+NPPIVFDI LPPG+ K
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYINASTCDLNYLPSNPPIVFDIILPPGIQK 298
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350406245|ref|XP_003487705.1| PREDICTED: metallophosphoesterase domain-containing protein 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 211/294 (71%), Positives = 253/294 (86%), Gaps = 4/294 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT NPTAAW+ELS QKVIKIN + P T+ K+RVVCMSDTHSLTP I+F+
Sbjct: 1 MKIDIHPLTNNPTAAWRELSQQQKVIKINTKLPTTEAANDKLRVVCMSDTHSLTPFIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPHK+K+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPMGDVFIHAGDFTKCGSLQEVIEFNNWIGNLPHKNKIVIAGNHELSFDPTFTHPFSLQT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S +R H +++ IPTLG+ +D+L EA++ N+++ LTNCTYL+D E I++GIK YGT
Sbjct: 121 SGNRQKHTGTSILDNIPTLGMSKDTLAEAIQTANVKEYLTNCTYLEDSETIIHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPP 290
VQ RVKPKYHVFGH+HEGYGI+SDG+II++NASTCDLNYLP+NPP+VFDI LPP
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYVNASTCDLNYLPSNPPVVFDITLPP 294
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332025600|gb|EGI65762.1| Metallophosphoesterase domain-containing protein 1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 251/298 (84%), Gaps = 4/298 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT +PTAAW ELS QKV+KIN + P T+ K+RVVCMSDTHSLTP I+F+
Sbjct: 1 MKIAIHPLTADPTAAWHELSQHQKVVKINAKLPTTEAPSDKLRVVCMSDTHSLTPFIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
+P GDIFIHAGDFT+CG +EV EFN WIGNL HKHK+VIAGNHELSFDPTFTHP S
Sbjct: 61 VPAGDIFIHAGDFTKCGSLQEVIEFNNWIGNLTHKHKIVIAGNHELSFDPTFTHPFSVHT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S H ++++IPTLG+ +D+L EA+K N++D LTNCTYL+D E I+ GIK YGT
Sbjct: 121 SGDHQKHTGTSILDDIPTLGMSKDTLAEAIKTTNVKDYLTNCTYLEDSEIIVNGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCCTG+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLCCTGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTK 294
VQ RVKPKYHVFGH+HEGYGI+SDG+II+INASTCD+NYLP+N PIVFDI LPPG+ K
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYINASTCDINYLPSNSPIVFDITLPPGIKK 298
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340716234|ref|XP_003396605.1| PREDICTED: metallophosphoesterase domain-containing protein 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 210/294 (71%), Positives = 254/294 (86%), Gaps = 4/294 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT NPTAAW+ELS QKVIKIN + P T+ K+RVVCMSDTHSLTP+I+F+
Sbjct: 1 MKIDIHPLTNNPTAAWRELSQQQKVIKINTKLPTTEAANDKLRVVCMSDTHSLTPYIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPHK+K+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPMGDVFIHAGDFTKCGSLQEVIEFNNWIGNLPHKNKIVIAGNHELSFDPTFTHPFSLQT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S +R H ++++IPTLG+ +D+L EA++ N+++ LTNCTYL+D E I++GIK YGT
Sbjct: 121 SGNRQKHTGTSILDDIPTLGMSKDTLAEAIQTANVKEYLTNCTYLEDSETIIHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEF KWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFYKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPP 290
VQ RVKPKYHVFGH+HEGYGI+SDG+II++NASTCDLNYLP+NPP+VFDI LPP
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYVNASTCDLNYLPSNPPVVFDITLPP 294
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307166004|gb|EFN60300.1| Metallophosphoesterase domain-containing protein 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 251/298 (84%), Gaps = 4/298 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT +PTAAW+ELS QKV+KI + P T+ K+RVVCMSDTHSLTP I+F+
Sbjct: 1 MKIAIHPLTADPTAAWRELSQYQKVVKITAKLPTTEAPSDKLRVVCMSDTHSLTPFIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPHKHK+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPAGDVFIHAGDFTKCGSLQEVIEFNNWIGNLPHKHKIVIAGNHELSFDPTFTHPFSVHT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S H +++ IPTLG+ +D+L EA+K N++D LTNCTYL+D E +++GIK YGT
Sbjct: 121 SGDHQKHTGTSILDNIPTLGMSKDTLAEAIKTTNVKDYLTNCTYLEDSEIVVHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWELIPSDTDILVTHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTK 294
VQ RVKPKYHVFGH+HEGYGI+SDG+II+INASTCD+NYLP+N PIVFDI LPP V K
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYINASTCDINYLPSNSPIVFDITLPPSVQK 298
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380013517|ref|XP_003690801.1| PREDICTED: LOW QUALITY PROTEIN: metallophosphoesterase domain-containing protein 1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 210/295 (71%), Positives = 251/295 (85%), Gaps = 4/295 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT NPTAAW ELS QKVIKIN + P T+ K+RVVCMSDTHSLTP I+F+
Sbjct: 1 MMIEIHPLTNNPTAAWHELSQQQKVIKINTKLPTTKAPNDKLRVVCMSDTHSLTPFIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPH++K+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPMGDVFIHAGDFTKCGSLQEVIEFNDWIGNLPHRNKIVIAGNHELSFDPTFTHPFSLQT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S +R H +++ IPTLG+ +D+L EA++ N++D LTNC YL+D E +++GIK YGT
Sbjct: 121 SGNRQKHTGTSILDNIPTLGMSKDTLAEAIQTTNIKDYLTNCIYLEDSEIVIHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPG 291
VQ RVKPKYHVFGH+HEGYGI+SDG+II+INASTCDLNYLP+NPP+VFDI LP G
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYINASTCDLNYLPSNPPVVFDITLPSG 295
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383853381|ref|XP_003702201.1| PREDICTED: metallophosphoesterase domain-containing protein 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 250/298 (83%), Gaps = 4/298 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M+I IHPLT NPTAAW+ELS QKVIKIN + P T K+RVVCMSDTHSLTP I+F+
Sbjct: 1 MNIEIHPLTANPTAAWRELSQQQKVIKINAKLPTTDAPNDKLRVVCMSDTHSLTPFIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV EFN WIGNLPHK+K+VIAGNHELSFDPTFT+P S
Sbjct: 61 IPLGDVFIHAGDFTKCGSLQEVIEFNNWIGNLPHKYKIVIAGNHELSFDPTFTNPFSLHT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S R H +++ IPTLG+ +D+L EA++ N++D LTNCTYL+D E +++GIK YGT
Sbjct: 121 SGDRQKHTGTSILDNIPTLGMSKDTLAEAIQTTNVKDYLTNCTYLEDSEIVIHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRG CLSKW IP DTD+LI+HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGAPCLSKWDMIPTDTDILITHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTK 294
VQ RVKPKYHVFGH+HEGYGI+SDG+II++NASTCDLNYLP+NPP+VFDI LPPG K
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISSDGKIIYVNASTCDLNYLPSNPPVVFDITLPPGHCK 298
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328776089|ref|XP_394142.4| PREDICTED: metallophosphoesterase domain-containing protein 1-like isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 208/295 (70%), Positives = 250/295 (84%), Gaps = 4/295 (1%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT NPTAAW ELS QKVIKIN + P T K+RVVCMSDTHSLTP I+F+
Sbjct: 1 MMIEIHPLTNNPTAAWHELSQQQKVIKINTKLPTTDAPNDKLRVVCMSDTHSLTPFIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IP GD+FIHAGDFT+CG +EV +FN WIGNLPH++K+VIAGNHELSFDPTFTHP S
Sbjct: 61 IPMGDVFIHAGDFTKCGSLQEVIDFNDWIGNLPHRNKIVIAGNHELSFDPTFTHPFSLQT 120
Query: 121 SPSRTMH----LINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
S +R H +++ IPTLG+ +D+L EA++ N++D LTNC YL+D E I++GIK YGT
Sbjct: 121 SGNRQKHTGTSILDNIPTLGMSKDTLAEAIQTTNIKDYLTNCIYLEDSEIIIHGIKIYGT 180
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNVPRGEACLSKW+ IP+DTD+L++HTPP+GHGDLCC+G+RAGCVELL+T
Sbjct: 181 PWQPEFCKWAFNVPRGEACLSKWEMIPSDTDILVTHTPPVGHGDLCCSGVRAGCVELLST 240
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPG 291
VQ RVKPKYHVFGH+HEGYGI++DG+II++NASTCDLNYLP+NPP+VFDI LP G
Sbjct: 241 VQNRVKPKYHVFGHIHEGYGISTDGKIIYVNASTCDLNYLPSNPPVVFDITLPSG 295
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158292973|ref|XP_314287.3| AGAP004891-PA [Anopheles gambiae str. PEST] gi|157016883|gb|EAA09732.3| AGAP004891-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 246/299 (82%), Gaps = 6/299 (2%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M I IHPLT +PT+AWKELS SQ+VIKIN +PP V KVRVVCMSDTHSLT HI+F+
Sbjct: 1 MKIDIHPLTHDPTSAWKELSKSQRVIKINTKPPAVDVPSNKVRVVCMSDTHSLTHHIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSS-- 118
IPDGDIFIHAGDFTRCG +EV +FN W+ LPHKHKLVIAGNHELSFD TFTHP +
Sbjct: 61 IPDGDIFIHAGDFTRCGKLDEVVDFNEWLKKLPHKHKLVIAGNHELSFDHTFTHPFQNAS 120
Query: 119 --CRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176
C+ T L++EIPTLG ++SL EAVK N+R L++CTYLQDE LYG+K YGT
Sbjct: 121 ACCKKTGST--LLDEIPTLGNSKESLAEAVKTENIRQYLSSCTYLQDECVELYGLKIYGT 178
Query: 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTT 236
PWQPEFCKWAFNV RG+ACL KW+ IP + D+L++HTPP+GHGDLCC+G+RAGCVELL T
Sbjct: 179 PWQPEFCKWAFNVKRGQACLEKWEQIPENVDILVTHTPPVGHGDLCCSGVRAGCVELLAT 238
Query: 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTKD 295
VQQRVKPKYHVFGHVHEGYGITSDGRIIF+NASTCD+NYLP N PIVFD+ LP G TKD
Sbjct: 239 VQQRVKPKYHVFGHVHEGYGITSDGRIIFVNASTCDINYLPNNQPIVFDVTLPKGRTKD 297
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 295 | ||||||
| FB|FBgn0036028 | 300 | CG16717 [Drosophila melanogast | 1.0 | 0.983 | 0.676 | 9.5e-121 | |
| WB|WBGene00016101 | 281 | C25E10.12 [Caenorhabditis eleg | 0.471 | 0.494 | 0.527 | 2.6e-63 | |
| UNIPROTKB|E2QSW4 | 326 | MPPED1 "Uncharacterized protei | 0.908 | 0.822 | 0.453 | 1.3e-61 | |
| UNIPROTKB|F6UP22 | 359 | MPPED1 "Uncharacterized protei | 0.908 | 0.746 | 0.453 | 1.3e-61 | |
| UNIPROTKB|B7Z2S9 | 359 | MPPED1 "cDNA FLJ54633, highly | 0.908 | 0.746 | 0.453 | 1.3e-61 | |
| UNIPROTKB|O15442 | 326 | MPPED1 "Metallophosphoesterase | 0.908 | 0.822 | 0.453 | 1.3e-61 | |
| MGI|MGI:106316 | 326 | Mpped1 "metallophosphoesterase | 0.908 | 0.822 | 0.453 | 1.3e-61 | |
| RGD|1308244 | 326 | Mpped1 "metallophosphoesterase | 0.908 | 0.822 | 0.453 | 1.3e-61 | |
| UNIPROTKB|E1C8B4 | 302 | MPPED1 "Uncharacterized protei | 0.908 | 0.887 | 0.449 | 3.4e-61 | |
| WB|WBGene00011579 | 396 | T07D4.2 [Caenorhabditis elegan | 0.949 | 0.707 | 0.447 | 4.3e-61 |
| FB|FBgn0036028 CG16717 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 203/300 (67%), Positives = 252/300 (84%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFN 60
M +P+HPL+Q+PTAAW+E+S +Q+VIK+ ++PP T V P K RVVCMSDTHSLTP+I+F+
Sbjct: 1 MEVPVHPLSQDPTAAWREISKTQRVIKVTMKPPTTTVAPNKARVVCMSDTHSLTPYIKFD 60
Query: 61 IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120
IPDGDIFIHAGDFT+CG EEV EFNTWIG LPH+HK+VIAGNHELSFD TFTHP +
Sbjct: 61 IPDGDIFIHAGDFTKCGQLEEVEEFNTWIGALPHRHKIVIAGNHELSFDRTFTHPFQKSK 120
Query: 121 SPSRT-----MHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYG 175
S + + M +++++PTLG +++L A++ +N+RD LTNC YL+DE ++GI+ YG
Sbjct: 121 SHASSSKHTGMSILDDLPTLGNAKENLESALQTQNVRDVLTNCRYLEDELLEIWGIQIYG 180
Query: 176 TPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLT 235
+PWQPEFC+WAFNVPRG ACL KW IP D+L++HTPP+GHGDLCC+G+RAGCVELL+
Sbjct: 181 SPWQPEFCRWAFNVPRGTACLDKWNQIPEGIDILVTHTPPVGHGDLCCSGVRAGCVELLS 240
Query: 236 TVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTKD 295
TVQQRV+PKYHVFGHVHEGYGITSDGRIIF+NASTCD+NYLP N PIVFD+ LPPG KD
Sbjct: 241 TVQQRVRPKYHVFGHVHEGYGITSDGRIIFVNASTCDINYLPNNAPIVFDVTLPPGFRKD 300
|
|
| WB|WBGene00016101 C25E10.12 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 403 (146.9 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 76/144 (52%), Positives = 94/144 (65%)
Query: 155 LTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTP 214
L+NCTYL D+ YG+K YG PW ++F RG+ L KW IPA DVL++HTP
Sbjct: 138 LSNCTYLCDKSYEAYGLKIYGAPWH-SMPGYSFFRQRGQKILHKWNQIPAKIDVLMTHTP 196
Query: 215 PIGHGDLCC----TGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINAST 270
P+GHGD G+ GC ELL TV+QRVKPKYHVFGHVH+ +G+T++G FINA+
Sbjct: 197 PLGHGDFNAWDKMDGILCGCAELLNTVEQRVKPKYHVFGHVHQKHGVTTNGETTFINAAL 256
Query: 271 CDLNYLPTNPPIVFDIALPPGVTK 294
CD PI+FDI LPPG TK
Sbjct: 257 CDHKLRSAYDPIIFDIPLPPGKTK 280
|
|
| UNIPROTKB|E2QSW4 MPPED1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/298 (45%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 45 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHS 100
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 101 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 158
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 159 M------------ADLIKQ-DFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFR 205
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 206 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCV 265
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 266 ELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 323
|
|
| UNIPROTKB|F6UP22 MPPED1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/298 (45%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 78 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHS 133
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 134 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 191
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 192 M------------ADLIKQ-DFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFR 238
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 239 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCV 298
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 299 ELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 356
|
|
| UNIPROTKB|B7Z2S9 MPPED1 "cDNA FLJ54633, highly similar to Metallophosphoesterase domain-containing protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/298 (45%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 78 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHS 133
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 134 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 191
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 192 M------------ADLIKQ-DFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFR 238
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 239 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCV 298
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 299 ELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 356
|
|
| UNIPROTKB|O15442 MPPED1 "Metallophosphoesterase domain-containing protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/298 (45%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 45 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHS 100
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 101 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 158
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 159 M------------ADLIKQ-DFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFR 205
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 206 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCV 265
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 266 ELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 323
|
|
| MGI|MGI:106316 Mpped1 "metallophosphoesterase domain containing 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/298 (45%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 45 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHS 100
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 101 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 158
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 159 M------------ADLIKQ-DFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFR 205
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 206 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCV 265
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 266 ELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 323
|
|
| RGD|1308244 Mpped1 "metallophosphoesterase domain containing 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/298 (45%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 45 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHS 100
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 101 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 158
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 159 M------------ADLIKQ-DFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFR 205
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 206 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCV 265
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+RV+P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 266 ELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTP 323
|
|
| UNIPROTKB|E1C8B4 MPPED1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 134/298 (44%), Positives = 175/298 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQ-VDPKK---------VRVVCMSDTHS 52
I + + NPT A+ + +Q QPP Q VDP R VC+SDTHS
Sbjct: 21 IEVDEYSSNPTQAFTFYNINQG----RFQPPHVQMVDPVPHDAPKPPGYTRFVCISDTHS 76
Query: 53 LTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112
T I+ +P GD+ IHAGDFT G EV +FN W+G+LP+++K+VIAGNHEL+FD F
Sbjct: 77 RTDPIQ--MPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYKIVIAGNHELTFDQEF 134
Query: 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIK 172
LI + P S + N++ LTNC YLQD E + G +
Sbjct: 135 M------------ADLIKQ-DFYYFPSVSKLKPESYENVQSLLTNCIYLQDSEVTVRGFR 181
Query: 173 FYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGL-RAGCV 231
YG+PWQP F W FN+PRG+A L KW IP D+LI+H PP+G D + R GCV
Sbjct: 182 IYGSPWQPWFYGWGFNLPRGQALLEKWNLIPDGIDILITHGPPLGFLDWVPKKMQRVGCV 241
Query: 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALP 289
ELL TVQ+R++P+ HVFGH+HEGYG+ +DG ++NAS C +NY P NPPIV D+ P
Sbjct: 242 ELLNTVQRRIQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPLNPPIVIDLPTP 299
|
|
| WB|WBGene00011579 T07D4.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 129/288 (44%), Positives = 169/288 (58%)
Query: 3 IPIHPLTQNPTAAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFNIP 62
+ +H T++PT AW+ L + V + T V P VR VC+ TH I +P
Sbjct: 96 VSLHQYTEDPTLAWEMLKEKRPVKPVRQMRLDTPVKPDHVRFVCIGCTHGEQFDIS-KLP 154
Query: 63 DGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSP 122
GD+ + AGDFT CG EV FN +G L + +K+VI GNHE +FD TF L P
Sbjct: 155 PGDVLLVAGDFTSCGLPNEVHNFNKLLGKLKYSYKVVIGGNHECTFDDTFLK-LKQESEP 213
Query: 123 SRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEF 182
+ M L + + + DS + A+ D L+N YL+D L+GI YGTPWQP+
Sbjct: 214 -KEMALKQALLS-AIHSDS-KGGISAK---DLLSNAIYLEDNVIELFGITIYGTPWQPKV 267
Query: 183 CKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVK 242
WAFN+ RG+ L KW IPA DVL++HTPP+GHGD+ G R GC ELL TV +RV+
Sbjct: 268 DNWAFNLSRGQQLLDKWNLIPAGVDVLLTHTPPLGHGDMMNNGQRMGCAELLNTVFKRVR 327
Query: 243 PKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPP 290
PKYHVFGH+HEGYG T+DG FIN C+ N N P++FDI + P
Sbjct: 328 PKYHVFGHIHEGYGCTTDGYTKFINCCMCNENLDLKNEPVIFDIPVHP 375
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O15442 | MPPD1_HUMAN | 3, ., 1, ., -, ., - | 0.44 | 0.9152 | 0.8282 | yes | N/A |
| Q5REB1 | MPPD2_PONAB | 3, ., 1, ., -, ., - | 0.4403 | 0.9220 | 0.9251 | yes | N/A |
| Q91ZG2 | MPPD1_MOUSE | 3, ., 1, ., -, ., - | 0.44 | 0.9152 | 0.8282 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 295 | |||
| cd07379 | 135 | cd07379, MPP_239FB, Homo sapiens 239FB and related | 4e-32 | |
| cd07379 | 135 | cd07379, MPP_239FB, Homo sapiens 239FB and related | 6e-28 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 4e-09 | |
| COG2129 | 226 | COG2129, COG2129, Predicted phosphoesterases, rela | 2e-06 | |
| cd07403 | 129 | cd07403, MPP_TTHA0053, Thermus thermophilus TTHA00 | 2e-05 | |
| cd07392 | 188 | cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE10 | 8e-05 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 8e-04 |
| >gnl|CDD|163622 cd07379, MPP_239FB, Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 4e-32
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 43 RVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102
R VC+SDTHS +IPDGD+ IHAGD T G EE+ +F W+ +LPH HK+VIAG
Sbjct: 1 RFVCISDTHSRHR--TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPHPHKIVIAG 58
Query: 103 NHELSFDPTFTH 114
NH+L+ DP T
Sbjct: 59 NHDLTLDPEDTD 70
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 135 |
| >gnl|CDD|163622 cd07379, MPP_239FB, Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 6e-28
Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
Query: 203 PADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITS--- 259
P DTD+L++H PP GH DL +G R GC ELL V QRV+PK HVFGH+HEGYG
Sbjct: 66 PEDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRV-QRVRPKLHVFGHIHEGYGAERVLD 124
Query: 260 -DGRIIFINAS 269
DG +F+NAS
Sbjct: 125 TDGETLFVNAS 135
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 135 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 54.8 bits (131), Expect = 4e-09
Identities = 27/220 (12%), Positives = 46/220 (20%), Gaps = 45/220 (20%)
Query: 43 RVVCMSDTH-----SLTPHIRFNI---PDGDIFIHAGDFT-RCGGEEEVTEFNTWIGNLP 93
R++ + D H + + P D+ + GD R EV +
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALLFALKLKA 60
Query: 94 HKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRD 153
++ GNH+ + C V
Sbjct: 61 PGPVYLVRGNHDFDSGNSELGFYLECAGLPY---------------------VLGNGDVS 99
Query: 154 RLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHT 213
T G + + D +L+ H
Sbjct: 100 NGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAA--------------LVDGKILLVHG 145
Query: 214 PPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHE 253
P D G L + + + GH H
Sbjct: 146 PLSPSLDSGDDIYLFGEEALE-DLLKDNGVDLVLRGHTHV 184
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|225040 COG2129, COG2129, Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 208 VLISHTPPIGHGDLCCTGL-RAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFI 266
+L++H PP G +G G + ++ +P + GH+HE GI G I +
Sbjct: 141 ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIE-EFQPLLGLHGHIHESRGIDKIGNTIVV 199
Query: 267 N-ASTCDLNY 275
N + Y
Sbjct: 200 NPGPLGEGRY 209
|
Length = 226 |
| >gnl|CDD|163646 cd07403, MPP_TTHA0053, Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-05
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 12/72 (16%)
Query: 205 DTDVLISHTPPIG---HGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYG----I 257
D D+L++H PP G D G A R +PK + GH H YG I
Sbjct: 56 DVDILLTHAPPAGIGDGEDFAHRGFEA-----FLDFIDRFRPKLFIHGHTHLNYGYQLRI 110
Query: 258 TSDGRIIFINAS 269
G INA
Sbjct: 111 RRVGDTTVINAY 122
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 129 |
| >gnl|CDD|163635 cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 8e-05
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 204 ADTDVLISHTPPIGHG-DLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGR 262
A +L++H PP G D G G + + + +P + GH+HE G+ G
Sbjct: 123 AKNLILVTHAPPYGTAVDRVSGGFHVGS-KAIRKFIEERQPLLCICGHIHESRGVDKIGN 181
Query: 263 IIFINAS 269
+ +N
Sbjct: 182 TLVVNPG 188
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 188 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 8e-04
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 207 DVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSD-GRIIF 265
D+L++H PP D G LL + ++ + GH H D G ++
Sbjct: 69 DILLTHGPPYDPLDELSPDEDPGSEALLE-LLEKYGVDLVLSGHTHVYERREPDGGGTLY 127
Query: 266 INA 268
IN
Sbjct: 128 INP 130
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 295 | |||
| KOG3947|consensus | 305 | 100.0 | ||
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.95 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.95 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.93 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.89 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.88 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.88 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.87 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.87 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.87 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.84 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.83 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.83 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.83 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.8 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.77 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.74 | |
| PHA03008 | 234 | hypothetical protein; Provisional | 99.74 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.73 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.72 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.71 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 99.71 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.69 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.69 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.66 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.66 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.64 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.63 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.62 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.62 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.62 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.62 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.61 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 99.6 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.58 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.56 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.51 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.48 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.47 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.47 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.45 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.42 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.42 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.41 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.33 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 99.33 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.31 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.28 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 99.27 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.27 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.27 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 99.2 | |
| KOG2863|consensus | 456 | 99.18 | ||
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.17 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.12 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.11 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.09 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 99.06 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.05 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.0 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.99 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.95 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.94 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.9 | |
| KOG1432|consensus | 379 | 98.9 | ||
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.89 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 98.79 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.75 | |
| KOG1378|consensus | 452 | 98.75 | ||
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.74 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.67 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.66 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 98.62 | |
| KOG2679|consensus | 336 | 98.61 | ||
| PHA02239 | 235 | putative protein phosphatase | 98.59 | |
| KOG3325|consensus | 183 | 98.57 | ||
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 98.55 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.51 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.49 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.48 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.46 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 98.45 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 98.42 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 98.4 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.4 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.37 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 98.35 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.32 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 98.29 | |
| KOG2310|consensus | 646 | 98.27 | ||
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.27 | |
| KOG3662|consensus | 410 | 98.21 | ||
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 98.15 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 98.12 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.1 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.06 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 98.04 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.97 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.97 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 97.91 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.9 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.83 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.79 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.79 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.77 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 97.61 | |
| KOG2476|consensus | 528 | 97.47 | ||
| KOG3770|consensus | 577 | 97.44 | ||
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 97.41 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 97.33 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 97.27 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 97.25 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 97.11 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 97.11 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 97.05 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 97.03 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 97.0 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 96.91 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 96.88 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 96.53 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 96.3 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 93.45 | |
| KOG0373|consensus | 306 | 92.94 | ||
| KOG0371|consensus | 319 | 92.88 | ||
| KOG0372|consensus | 303 | 91.94 | ||
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 91.86 | |
| KOG0374|consensus | 331 | 91.42 | ||
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 87.38 | |
| KOG0375|consensus | 517 | 86.49 | ||
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 83.17 |
| >KOG3947|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=270.42 Aligned_cols=283 Identities=51% Similarity=0.926 Sum_probs=235.6
Q ss_pred CcccCCCCCCChhHHHHhhccceeeeeeecCCC--CCCCCCCceEEEEEccCCCCCccccccCCCCcEEEEcCCCCCCCC
Q psy12823 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQPP--KTQVDPKKVRVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFTRCGG 78 (295)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~mrI~~iSDlH~~~~~l~~~~~~~D~viiaGDl~~~g~ 78 (295)
++|++||+.+|||.+|+++.++|.+.+-++-++ ..|......|++.|||+|.....+. ..+..|+++.+||+++.|.
T Consensus 19 ~~i~vd~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~-~~p~gDvlihagdfT~~g~ 97 (305)
T KOG3947|consen 19 LIIEVDEYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN-DIPDGDVLIHAGDFTNLGL 97 (305)
T ss_pred eeEeccCcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc-cCCCCceEEeccCCccccC
Confidence 468999999999999999999999999877565 7778888999999999999877664 5789999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCe
Q psy12823 79 EEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNC 158 (295)
Q Consensus 79 ~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (295)
.++...+.+++.+++.+..++|.|||+++++..+...+.+ .+-..+ .++.+...+ +...+....++.|+
T Consensus 98 ~~ev~~fn~~~gslph~yKIVIaGNHELtFd~ef~~~~~k--~~~~~~----~~p~~s~l~-----P~a~egv~~lLTN~ 166 (305)
T KOG3947|consen 98 PEEVIKFNEWLGSLPHEYKIVIAGNHELTFDHEFMADLIK--DEQDAY----YFPGVSKLK-----PEAYEGVQSLLTNC 166 (305)
T ss_pred HHHHHhhhHHhccCcceeeEEEeeccceeecccccchhhc--ccccee----cCccccccC-----ccccccccchhcee
Confidence 9999999999999998788999999999988665443221 000000 011111111 00011122356799
Q ss_pred EEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCc--CCCccCcHHHHHH
Q psy12823 159 TYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCC--TGLRAGCVELLTT 236 (295)
Q Consensus 159 ~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~--~~~~~g~~~l~~~ 236 (295)
.||.++.+++.|++|+|++|++.+.+|+|.....+.+++.|+++|++.++|+||.||.+..|... .+.+.||.++...
T Consensus 167 iYLqD~~vtv~G~~Iygspw~p~~~g~~f~l~rg~~~ld~W~~ip~~iDvL~tHtPPlG~gd~~~~~~gqr~GC~ell~t 246 (305)
T KOG3947|consen 167 IYLQDSEVTVRGVRIYGSPWTPLLPGWAFNLPRGQSLLDKWNQIPGGIDVLITHTPPLGHGDLVPVFSGQRNGCVELLNT 246 (305)
T ss_pred EEEecCcEEEEEEEEecCCCCcccCchhhhhhhhHhhhHHHhcCccccceeccCCCCCCcchhcccccCcccCHHHHHHh
Confidence 99999999999999999999988878999888888888899999999999999999999877643 5788999999999
Q ss_pred HHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCCCCCCCEEEEecCCCCCCCC
Q psy12823 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPGVTKD 295 (295)
Q Consensus 237 l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (295)
++...++++.++||+|..+++..+|.+.++|++.|..++++.++|.++++..++|-+|+
T Consensus 247 Ve~rvqpk~hVfGhvhe~~Gvta~G~t~fina~~C~~~~~~t~~pilfdip~~~~t~~~ 305 (305)
T KOG3947|consen 247 VERRVQPKYHVFGHVHEGHGVTADGYTTFINAELCNINLRPTNKPILFDIPKPPGTEKS 305 (305)
T ss_pred HhhccccceEEeeeeecCceeeecCccccccHHHhhhccccCCCCeEEeCCCCCCcCCC
Confidence 97678999999999999999999999999999999999999999999999999998875
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-27 Score=201.93 Aligned_cols=190 Identities=13% Similarity=0.081 Sum_probs=134.0
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCC-CHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCG-GEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFT 113 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g-~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~ 113 (295)
..|||+++||+|.+...++ .+..++|+||++||+++.+ ..+++..+++.|.++. .|+++|+||||... .
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~v-~--- 77 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAPL-W--- 77 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChHH-H---
Confidence 5799999999999876552 2346899999999999998 5788888888888876 49999999999521 0
Q ss_pred CCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhh--hccCCeEEccCCcEEEcc-eEEEeecCCCCCCCCCcccC
Q psy12823 114 HPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMR--DRLTNCTYLQDEERILYG-IKFYGTPWQPEFCKWAFNVP 190 (295)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~~~~~i~g-v~i~G~~~~~~~~~~~~~~~ 190 (295)
+.++ +.+. ....++..|+++.+.+.| ++|+|.+.++... ..+.+.
T Consensus 78 --------------------------~~l~-----~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~~~~-~e~sE~ 125 (224)
T cd07388 78 --------------------------EYLR-----EAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEIADE-GEPEEH 125 (224)
T ss_pred --------------------------HHHH-----HHhcccccCccceecCCCeEEecCCeEEEEecCCcCCC-CCcCHH
Confidence 0111 0010 001234567777888866 8999988654221 122211
Q ss_pred ch--------hhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCc
Q psy12823 191 RG--------EACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGR 262 (295)
Q Consensus 191 ~~--------~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~ 262 (295)
+. +..++.+.....+.+||+||+||++.. ..+.||..+.+++ ++++|++++|||+| ...+..|.
T Consensus 126 e~~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g-----~~h~GS~alr~~I-~~~~P~l~i~GHih--~~~~~~g~ 197 (224)
T cd07388 126 EALRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKG-----LNEQGSHEVAHLI-KTHNPLVVLVGGKG--QKHELLGA 197 (224)
T ss_pred HHhhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCC-----CCccCHHHHHHHH-HHhCCCEEEEcCCc--eeEEEeCC
Confidence 10 112222323345689999999999762 1379999999999 69999999999999 44467899
Q ss_pred EEEEeCCcCCCC
Q psy12823 263 IIFINASTCDLN 274 (295)
Q Consensus 263 ~~~vn~g~~~~~ 274 (295)
|++||||....+
T Consensus 198 t~vvNpg~~~~g 209 (224)
T cd07388 198 SWVVVPGDLSEG 209 (224)
T ss_pred EEEECCCcccCC
Confidence 999999997554
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=194.71 Aligned_cols=181 Identities=20% Similarity=0.313 Sum_probs=126.9
Q ss_pred EEEEccCCCCCcccc---ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR---FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCR 120 (295)
Q Consensus 44 I~~iSDlH~~~~~l~---~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~ 120 (295)
|+++||+|++...+. .+..++|+||++||+++.+..+++..+ +.|++++ .|+++|+||||......
T Consensus 1 i~~~sD~H~~~~~~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~-~~l~~~~-~p~~~v~GNHD~~~~~~--------- 69 (188)
T cd07392 1 ILAISDIHGDVEKLEAIILKAEEADAVIVAGDITNFGGKEAAVEI-NLLLAIG-VPVLAVPGNCDTPEILG--------- 69 (188)
T ss_pred CEEEEecCCCHHHHHHHHhhccCCCEEEECCCccCcCCHHHHHHH-HHHHhcC-CCEEEEcCCCCCHHHHH---------
Confidence 689999999877653 245689999999999999887776655 8888776 48999999999631000
Q ss_pred CCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCC--C-CCCcccCchhhhhh
Q psy12823 121 SPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEF--C-KWAFNVPRGEACLS 197 (295)
Q Consensus 121 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~--~-~~~~~~~~~~~~~~ 197 (295)
. ...+...++++.+++++++|+|....... . ...+...+.+++ +
T Consensus 70 -----------------------------~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~ 116 (188)
T cd07392 70 -----------------------------L---LTSAGLNLHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-G 116 (188)
T ss_pred -----------------------------h---hhcCcEecCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-h
Confidence 0 01234456677788889999997632211 0 112221122221 1
Q ss_pred hccCCCCCccEEEecCCCCC-CCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCC
Q psy12823 198 KWQDIPADTDVLISHTPPIG-HGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINAS 269 (295)
Q Consensus 198 ~~~~~~~~~~IlvtH~pp~~-~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g 269 (295)
.+...+++++|++||+||.+ ..|......+.|+.++.+++ ++++|++++|||+|.+......|+++++|+|
T Consensus 117 ~l~~~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li-~~~~~~~~l~GH~H~~~~~~~~~~~~~~n~G 188 (188)
T cd07392 117 RLNNLLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFI-EERQPLLCICGHIHESRGVDKIGNTLVVNPG 188 (188)
T ss_pred hhhccCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHH-HHhCCcEEEEeccccccceeeeCCeEEecCC
Confidence 12233457899999999987 35544333357889999988 5889999999999999876678999999997
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-25 Score=185.76 Aligned_cols=191 Identities=21% Similarity=0.287 Sum_probs=134.6
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCC--CCCCHHHHHHH--HHHHhcCCCCcEEEEcCCCCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFT--RCGGEEEVTEF--NTWIGNLPHKHKLVIAGNHELSFDP 110 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~--~~g~~~e~~~~--~~~L~~l~~~pv~~V~GNHD~~~~~ 110 (295)
.+|||+++||+|.....++ ....++|+++++|||+ +.+......+. ++.+++.. .||++||||.|.....
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~-~~v~avpGNcD~~~v~ 80 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELG-IPVLAVPGNCDPPEVI 80 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcC-CeEEEEcCCCChHHHH
Confidence 5799999999999876541 2334899999999999 88876665554 56777665 4999999999963110
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCC---CCCCCCCc
Q psy12823 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQ---PEFCKWAF 187 (295)
Q Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~---~~~~~~~~ 187 (295)
..+ ......+++++++++++.|.|...+ |....+.|
T Consensus 81 -----------------------------~~l------------~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~ 119 (226)
T COG2129 81 -----------------------------DVL------------KNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREF 119 (226)
T ss_pred -----------------------------HHH------------HhcccccccceEEecCcEEEEecccCCCCCCCcccc
Confidence 011 0112334568888999999885532 21112344
Q ss_pred ccCchhhhhh-hccCCCCCccEEEecCCCCCCCCCCcCC-CccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEE
Q psy12823 188 NVPRGEACLS-KWQDIPADTDVLISHTPPIGHGDLCCTG-LRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIF 265 (295)
Q Consensus 188 ~~~~~~~~~~-~~~~~~~~~~IlvtH~pp~~~~D~~~~~-~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~ 265 (295)
.+..+....+ .+..+.+...|+++|+||++..+....+ .|.||.++++++ ++.||.+.+|||+|++.+....|.|++
T Consensus 120 ~E~~I~s~l~~~v~~~~~~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~i-eefqP~l~i~GHIHEs~G~d~iG~Tiv 198 (226)
T COG2129 120 SEDEIYSKLKSLVKKADNPVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLI-EEFQPLLGLHGHIHESRGIDKIGNTIV 198 (226)
T ss_pred CHHHHHHHHHHHHhcccCcceEEEecCCCCCccccCCCCccccchHHHHHHH-HHhCCceEEEeeecccccccccCCeEE
Confidence 3332222222 2222222223999999999986555455 799999999999 699999999999999999999999999
Q ss_pred EeCCcCCC
Q psy12823 266 INASTCDL 273 (295)
Q Consensus 266 vn~g~~~~ 273 (295)
||||..+.
T Consensus 199 VNPG~~~~ 206 (226)
T COG2129 199 VNPGPLGE 206 (226)
T ss_pred ECCCCccC
Confidence 99999643
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-22 Score=161.78 Aligned_cols=131 Identities=59% Similarity=1.090 Sum_probs=106.1
Q ss_pred EEEEEccCCCCCccccccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSP 122 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~ 122 (295)
||+++||+|..... .+..++|+|+++||+++.+...+++.+.+++++++.+++++|+||||.+.
T Consensus 1 ~i~~isD~H~~~~~--~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~~~~~~v~GNHD~~~-------------- 64 (135)
T cd07379 1 RFVCISDTHSRHRT--ISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPHPHKIVIAGNHDLTL-------------- 64 (135)
T ss_pred CEEEEeCCCCCCCc--CcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCCCCeEEEEECCCCCcC--------------
Confidence 58999999998662 34568999999999999888888888899999886534689999999530
Q ss_pred CccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhhhhccCC
Q psy12823 123 SRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDI 202 (295)
Q Consensus 123 ~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (295)
.
T Consensus 65 ----------------------------------~--------------------------------------------- 65 (135)
T cd07379 65 ----------------------------------D--------------------------------------------- 65 (135)
T ss_pred ----------------------------------C---------------------------------------------
Confidence 0
Q ss_pred CCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCee----ecCcEEEEeCC
Q psy12823 203 PADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGIT----SDGRIIFINAS 269 (295)
Q Consensus 203 ~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~----~~g~~~~vn~g 269 (295)
.++.+|+++|.||.+..+......+.|+.++.+.+ ++.++++++|||+|.++... ..++|+++|+|
T Consensus 66 ~~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~i~GH~H~~~~~~~~~~~~~~t~~in~~ 135 (135)
T cd07379 66 PEDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRV-QRVRPKLHVFGHIHEGYGAERVLDTDGETLFVNAS 135 (135)
T ss_pred CCCCEEEEECCCCCcCccccccCcccCCHHHHHHH-HHHCCcEEEEcCcCCcCceeEecccCCCEEEEeCC
Confidence 03467999999998765553333568888999888 58899999999999998776 77999999986
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-22 Score=178.43 Aligned_cols=201 Identities=15% Similarity=0.184 Sum_probs=127.0
Q ss_pred eeeeeecCCCCCCCCCCceEEEEEccCCCCCc----cc-----cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12823 24 KVIKINVQPPKTQVDPKKVRVVCMSDTHSLTP----HI-----RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPH 94 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~mrI~~iSDlH~~~~----~l-----~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~ 94 (295)
++.+.++. ..|+...+|||+++||+|.... .+ ..+..+||+|+++||+++.+...+...+.+.|+++..
T Consensus 34 ~v~~~~i~--~~~~~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~ 111 (271)
T PRK11340 34 ELIRHRLA--FFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAE 111 (271)
T ss_pred EEEEEEcc--CCCCCCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhh
Confidence 44555543 1555667899999999998632 11 1245699999999999984433333344455555431
Q ss_pred -CcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEc----
Q psy12823 95 -KHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILY---- 169 (295)
Q Consensus 95 -~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~---- 169 (295)
.|+|+|+||||++..... .+.+++ ..+ ..++.+|.++.+.+.
T Consensus 112 ~~pv~~V~GNHD~~~~~~~--------------------------~~~~~~------~l~-~~gi~lL~n~~~~i~~~~~ 158 (271)
T PRK11340 112 CAPTFACFGNHDRPVGTEK--------------------------NHLIGE------TLK-SAGITVLFNQATVIATPNR 158 (271)
T ss_pred cCCEEEecCCCCcccCccc--------------------------hHHHHH------HHH-hcCcEEeeCCeEEEeeCCc
Confidence 389999999997531110 001111 111 247889988887763
Q ss_pred ceEEEeecCCCCCCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEec
Q psy12823 170 GIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFG 249 (295)
Q Consensus 170 gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~G 249 (295)
.+.++|.... |.... . ..+.+. .+.+.|+++|.|-. .+ .+ .+.++|+++||
T Consensus 159 ~i~i~G~~d~-----~~~~~-~---~~~~~~--~~~~~IlL~H~P~~--~~---------------~~-~~~~~dL~lsG 209 (271)
T PRK11340 159 QFELVGTGDL-----WAGQC-K---PPPASE--ANLPRLVLAHNPDS--KE---------------VM-RDEPWDLMLCG 209 (271)
T ss_pred EEEEEEecch-----hccCC-C---hhHhcC--CCCCeEEEEcCCCh--hH---------------hh-ccCCCCEEEec
Confidence 4788887521 11000 0 111111 25689999999943 11 12 24578999999
Q ss_pred cccCCCCe---------------------eecCcEEEEeCCcCCC-CCCCCCCCEEEEecC
Q psy12823 250 HVHEGYGI---------------------TSDGRIIFINASTCDL-NYLPTNPPIVFDIAL 288 (295)
Q Consensus 250 H~H~~~~~---------------------~~~g~~~~vn~g~~~~-~~~~~~~~~~~~~~~ 288 (295)
|+|.++.. ...+.+++||.|.+.. ++|++++|+|+.++|
T Consensus 210 HTHGGQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l~Vs~G~G~~~p~R~~~~pEi~~i~l 270 (271)
T PRK11340 210 HTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERQIYTTRGVGSLYGLRLNCRPEVTMLEL 270 (271)
T ss_pred cccCCeEEccccCccccccccCcccCCcEEeCCcEEEEeCCccCCcCCcccCCCeEEEEEe
Confidence 99986631 1345679999999865 699999999988876
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=175.51 Aligned_cols=196 Identities=19% Similarity=0.227 Sum_probs=121.5
Q ss_pred CCCCCCceEEEEEccCCCCCcc------------c----c-c--cCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCC
Q psy12823 35 TQVDPKKVRVVCMSDTHSLTPH------------I----R-F--NIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHK 95 (295)
Q Consensus 35 ~~~~~~~mrI~~iSDlH~~~~~------------l----~-~--~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~ 95 (295)
.+.+..+|||++|||+|+.... + + . ...++|+||++||+++.+..++++.+.+.|++++ .
T Consensus 8 ~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~~~~~~~~~l~~l~-~ 86 (275)
T PRK11148 8 PLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSEAYQHFAEGIAPLR-K 86 (275)
T ss_pred ccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHHHHHHHHHHHhhcC-C
Confidence 4456678999999999974310 1 1 1 1247999999999999998889999999999987 4
Q ss_pred cEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEe
Q psy12823 96 HKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYG 175 (295)
Q Consensus 96 pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G 175 (295)
|+++|+||||... .+. +.+. ...+ ... .....-+++++++
T Consensus 87 Pv~~v~GNHD~~~--~~~--------------------------~~~~----~~~~---~~~-----~~~~~~~~~~~i~ 126 (275)
T PRK11148 87 PCVWLPGNHDFQP--AMY--------------------------SALQ----DAGI---SPA-----KHVLIGEHWQILL 126 (275)
T ss_pred cEEEeCCCCCChH--HHH--------------------------HHHh----hcCC---Ccc-----ceEEecCCEEEEE
Confidence 9999999999731 100 0000 0000 000 0011112355666
Q ss_pred ecCCC-CCCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCC-CcCCCccCcHHHHHHHHhhC-CCcEEEecccc
Q psy12823 176 TPWQP-EFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDL-CCTGLRAGCVELLTTVQQRV-KPKYHVFGHVH 252 (295)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~-~~~~~~~g~~~l~~~l~~~~-~~~~~l~GH~H 252 (295)
..... ..........+.+++.+.+++.+++..|+++||+|...... .......+..++.+++ +++ ++++++|||+|
T Consensus 127 Lds~~~g~~~G~l~~~ql~wL~~~L~~~~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll-~~~~~v~~vl~GH~H 205 (275)
T PRK11148 127 LDSQVFGVPHGELSEYQLEWLERKLADAPERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVL-AKFPNVKAILCGHIH 205 (275)
T ss_pred ecCCCCCCcCCEeCHHHHHHHHHHHhhCCCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHH-hcCCCceEEEecccC
Confidence 54211 00011122334455666666556667788888887643111 0011224557888888 465 89999999999
Q ss_pred CCCCeeecCcEEEEeCCcCC
Q psy12823 253 EGYGITSDGRIIFINASTCD 272 (295)
Q Consensus 253 ~~~~~~~~g~~~~vn~g~~~ 272 (295)
........|...++++++|.
T Consensus 206 ~~~~~~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 206 QELDLDWNGRRLLATPSTCV 225 (275)
T ss_pred hHHhceECCEEEEEcCCCcC
Confidence 98876666777778888874
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-22 Score=174.34 Aligned_cols=189 Identities=18% Similarity=0.226 Sum_probs=115.8
Q ss_pred EEEEEccCCCCCcc------c----c-ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC
Q psy12823 43 RVVCMSDTHSLTPH------I----R-FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPT 111 (295)
Q Consensus 43 rI~~iSDlH~~~~~------l----~-~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~ 111 (295)
||+++||+|++... + + .+..++|+||++||+++.. .+...+++.+.++...|+++|+||||.+....
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~--~~~~~~~~~l~~~~~~pv~~v~GNHD~~~~~~ 78 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF--QRSLPFIEKLQELKGIKVTFNAGNHDMLKDLT 78 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch--hhHHHHHHHHHHhcCCcEEEECCCCCCCCCCC
Confidence 69999999976422 1 1 2346899999999999864 23335556666543359999999999752111
Q ss_pred CCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEE--cceEEEeec-CCCC-CCC---
Q psy12823 112 FTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERIL--YGIKFYGTP-WQPE-FCK--- 184 (295)
Q Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i--~gv~i~G~~-~~~~-~~~--- 184 (295)
. +.+ .+.. +..+|+++...+ ++++|+|.+ |+.. ++.
T Consensus 79 ~---------------------------~~~---------~~~~-~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~ 121 (239)
T TIGR03729 79 Y---------------------------EEI---------ESND-SPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKT 121 (239)
T ss_pred H---------------------------HHH---------Hhcc-chhhhcccccccCCCceEEEeeccceecccccccC
Confidence 0 001 1001 334566666666 678999977 3220 000
Q ss_pred ------------------CCcccC-----chhhhhhhccCCCCCccEEEecCCCCCC-C----CC-CcC--CCccCcHHH
Q psy12823 185 ------------------WAFNVP-----RGEACLSKWQDIPADTDVLISHTPPIGH-G----DL-CCT--GLRAGCVEL 233 (295)
Q Consensus 185 ------------------~~~~~~-----~~~~~~~~~~~~~~~~~IlvtH~pp~~~-~----D~-~~~--~~~~g~~~l 233 (295)
+..... +.+++.+.+++.++++.|++||+||... . +. .+. ....|+.++
T Consensus 122 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l 201 (239)
T TIGR03729 122 SKEILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHF 201 (239)
T ss_pred HHHHHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHH
Confidence 000000 0112223344445678999999999642 1 11 111 124577889
Q ss_pred HHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcC
Q psy12823 234 LTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTC 271 (295)
Q Consensus 234 ~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~ 271 (295)
.+++ +++++++|+|||+|.+......+++.++|.+.+
T Consensus 202 ~~li-~~~~v~~~i~GH~H~~~~~~~i~~~~~~~~~~g 238 (239)
T TIGR03729 202 GQLL-VKYEIKDVIFGHLHRRFGPLTIGGTTYHNRPLG 238 (239)
T ss_pred HHHH-HHhCCCEEEECCccCCCCCEEECCEEEEecCCC
Confidence 9888 477999999999999985445688888887754
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=170.58 Aligned_cols=192 Identities=16% Similarity=0.153 Sum_probs=119.1
Q ss_pred EEEEEccCCCCCcc------------c----c-ccC--CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCC
Q psy12823 43 RVVCMSDTHSLTPH------------I----R-FNI--PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGN 103 (295)
Q Consensus 43 rI~~iSDlH~~~~~------------l----~-~~~--~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GN 103 (295)
||+++||+|.+... + . .+. .++|+||++||+++.+..++++.+.+.++++. .|+++|+||
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~-~p~~~v~GN 79 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAALP-IPVYLLPGN 79 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhcC-CCEEEeCCC
Confidence 69999999997531 1 1 122 48999999999999988888888999998886 499999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCC
Q psy12823 104 HELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFC 183 (295)
Q Consensus 104 HD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~ 183 (295)
||... .+. . .++ .. ..... ....++++++++|++++......
T Consensus 80 HD~~~--~~~-~-------~~~------------------------~~---~~~~~-~~~~~~~~~~~~~i~lds~~~~~ 121 (240)
T cd07402 80 HDDRA--AMR-A-------VFP------------------------EL---PPAPG-FVQYVVDLGGWRLILLDSSVPGQ 121 (240)
T ss_pred CCCHH--HHH-H-------hhc------------------------cc---ccccc-ccceeEecCCEEEEEEeCCCCCC
Confidence 99731 000 0 000 00 00000 01224566788999876332110
Q ss_pred -CCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCC-CcCCCccCcHHHHHHHHhhC-CCcEEEeccccCCCCeeec
Q psy12823 184 -KWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDL-CCTGLRAGCVELLTTVQQRV-KPKYHVFGHVHEGYGITSD 260 (295)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~-~~~~~~~g~~~l~~~l~~~~-~~~~~l~GH~H~~~~~~~~ 260 (295)
.......+.+++.+.+.+.+.++.|+++|+||...... .......++.++.+++ .++ ++++++|||+|........
T Consensus 122 ~~~~~~~~ql~wL~~~L~~~~~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l-~~~~~v~~v~~GH~H~~~~~~~~ 200 (240)
T cd07402 122 HGGELCAAQLDWLEAALAEAPDKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVL-ARHPNVRAILCGHVHRPIDGSWG 200 (240)
T ss_pred cCCEECHHHHHHHHHHHHhCCCCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHH-hcCCCeeEEEECCcCchHHeEEC
Confidence 11112223344555555555678899999999754211 1111234567888888 467 8999999999998765554
Q ss_pred CcEEEEeCCcCCCCC
Q psy12823 261 GRIIFINASTCDLNY 275 (295)
Q Consensus 261 g~~~~vn~g~~~~~~ 275 (295)
|. .+++.|+.+.++
T Consensus 201 g~-~~~~~gs~~~~~ 214 (240)
T cd07402 201 GI-PLLTAPSTCHQF 214 (240)
T ss_pred CE-EEEEcCcceeee
Confidence 54 544444443344
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-21 Score=168.12 Aligned_cols=194 Identities=23% Similarity=0.343 Sum_probs=121.5
Q ss_pred eEEEEEccCCCCCccc---cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHI---RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSS 118 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l---~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~ 118 (295)
+||+++||+|...... ..+..++|+|+++||+++.. .++++.|.+++. |+++|+||||.+.......+
T Consensus 1 ~rIa~isDiHg~~~~~~~~~l~~~~pD~Vl~~GDi~~~~-----~~~~~~l~~l~~-p~~~V~GNHD~~~~~~~~~k--- 71 (238)
T cd07397 1 LRIAIVGDVHGQWDLEDIKALHLLQPDLVLFVGDFGNES-----VQLVRAISSLPL-PKAVILGNHDAWYDATFRKK--- 71 (238)
T ss_pred CEEEEEecCCCCchHHHHHHHhccCCCEEEECCCCCcCh-----HHHHHHHHhCCC-CeEEEcCCCcccccccccch---
Confidence 5899999999876532 12446899999999998632 256677887764 89999999998643211000
Q ss_pred CCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEc--ceEEEee-cCCCCCCCCC--------c
Q psy12823 119 CRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILY--GIKFYGT-PWQPEFCKWA--------F 187 (295)
Q Consensus 119 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~--gv~i~G~-~~~~~~~~~~--------~ 187 (295)
. +.+.+ .. + ..++..+..+.+++. ++.++|. +|+..-+.|. |
T Consensus 72 ------~--------------~~l~~-----~L-~-~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~f 124 (238)
T cd07397 72 ------G--------------DRVQE-----QL-E-LLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVY 124 (238)
T ss_pred ------H--------------HHHHH-----HH-H-HhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHh
Confidence 0 01111 11 1 123444555666664 5888885 4654222232 1
Q ss_pred ccCchhhh----hhhccC-CCCCccEEEecCCCCCCCCCCcC---------CCccCcHHHHHHHHhhC----CCcEEEec
Q psy12823 188 NVPRGEAC----LSKWQD-IPADTDVLISHTPPIGHGDLCCT---------GLRAGCVELLTTVQQRV----KPKYHVFG 249 (295)
Q Consensus 188 ~~~~~~~~----~~~~~~-~~~~~~IlvtH~pp~~~~D~~~~---------~~~~g~~~l~~~l~~~~----~~~~~l~G 249 (295)
.....++. .+.... .++...|+++|.+|.+..|...+ +...|+++|.+.|. .. +|++++||
T Consensus 125 gi~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~-~~~~~~~~~l~~fG 203 (238)
T cd07397 125 GVISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAIS-QIQQGRQVPLVVFG 203 (238)
T ss_pred CCCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHH-HHhccCCCCEEEeC
Confidence 11111111 122222 24567999999999987644322 56789999987773 33 48999999
Q ss_pred cccCC--CCe-------eecCcEEEEeCCcCC
Q psy12823 250 HVHEG--YGI-------TSDGRIIFINASTCD 272 (295)
Q Consensus 250 H~H~~--~~~-------~~~g~~~~vn~g~~~ 272 (295)
|+|.+ ++. ...++|.|+|++++.
T Consensus 204 H~H~~l~~~~~~r~~~~~~~~gt~y~N~a~~p 235 (238)
T cd07397 204 HMHHRLRRGKGLRNMIAVDREGTVYLNAASVP 235 (238)
T ss_pred CccCcccccccccceeeecCCCeEEEeccccc
Confidence 99998 432 223689999999874
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=157.72 Aligned_cols=196 Identities=19% Similarity=0.276 Sum_probs=117.0
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCC-HHHHH--------------------------HHHH
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGG-EEEVT--------------------------EFNT 87 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~-~~e~~--------------------------~~~~ 87 (295)
.+-||+.+||.|.....+. +...++|+|+++||+..... .++|. .+++
T Consensus 4 ~~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 4 MVRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp S--EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 3458999999999876541 23348999999999976432 35666 7888
Q ss_pred HHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEE
Q psy12823 88 WIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERI 167 (295)
Q Consensus 88 ~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~ 167 (295)
.|..+.. |+++||||||.+. +..++++. +......+++.++.+...
T Consensus 84 ~L~~~~~-p~~~vPG~~Dap~------------------------------~~~lr~a~---~~e~v~p~~~~vH~sf~~ 129 (255)
T PF14582_consen 84 ILGELGV-PVFVVPGNMDAPE------------------------------RFFLREAY---NAEIVTPHIHNVHESFFF 129 (255)
T ss_dssp HHHCC-S-EEEEE--TTS-SH------------------------------HHHHHHHH---HCCCC-TTEEE-CTCEEE
T ss_pred HHHhcCC-cEEEecCCCCchH------------------------------HHHHHHHh---ccceeccceeeeeeeecc
Confidence 8888874 9999999999752 11222221 111124678888888888
Q ss_pred Ecc-eEEEeecCC-CCCC---CCCcccC--chhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhh
Q psy12823 168 LYG-IKFYGTPWQ-PEFC---KWAFNVP--RGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQR 240 (295)
Q Consensus 168 i~g-v~i~G~~~~-~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~ 240 (295)
.+| +.|+|.+.. +... .....++ ..+..++.+..+.+...|+++|.|| |......+.||..+.+++ +.
T Consensus 130 ~~g~y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk~~r~IlLfhtpP----d~~kg~~h~GS~~V~dlI-k~ 204 (255)
T PF14582_consen 130 WKGEYLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELKDYRKILLFHTPP----DLHKGLIHVGSAAVRDLI-KT 204 (255)
T ss_dssp ETTTEEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCTSSEEEEEESS-B----TBCTCTBTTSBHHHHHHH-HH
T ss_pred cCCcEEEEecCccccCCCccccccccchHHHHHHHHHHHHhcccccEEEEEecCC----ccCCCcccccHHHHHHHH-Hh
Confidence 887 889987632 1000 0111111 1222345666665568899999999 221223689999999999 69
Q ss_pred CCCcEEEeccccCCCCeeecCcEEEEeCCcCCCC
Q psy12823 241 VKPKYHVFGHVHEGYGITSDGRIIFINASTCDLN 274 (295)
Q Consensus 241 ~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~ 274 (295)
+||++++|||+|...+....|.|++||||+...|
T Consensus 205 ~~P~ivl~Ghihe~~~~e~lG~TlVVNPGsL~~G 238 (255)
T PF14582_consen 205 YNPDIVLCGHIHESHGKESLGKTLVVNPGSLAEG 238 (255)
T ss_dssp H--SEEEE-SSS-EE--EEETTEEEEE--BGGGT
T ss_pred cCCcEEEecccccchhhHHhCCEEEecCcccccC
Confidence 9999999999999998889999999999998653
|
|
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=158.93 Aligned_cols=187 Identities=19% Similarity=0.292 Sum_probs=113.5
Q ss_pred EEEEccCCCCCc------cc--------c-----c--cCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 44 VVCMSDTHSLTP------HI--------R-----F--NIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 44 I~~iSDlH~~~~------~l--------~-----~--~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
|.++||||+... .+ + . ...++|+||++|||++.+..++....+++|++++. |+++|+|
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l~~-~v~~V~G 79 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDALPG-TKVLLKG 79 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhCCC-CeEEEeC
Confidence 579999998841 11 0 1 12489999999999987776677777888888765 7999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeec-CCCC
Q psy12823 103 NHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTP-WQPE 181 (295)
Q Consensus 103 NHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~-~~~~ 181 (295)
|||.+... .+.+++. +. ..++..+.+..+.++++.|+|.. |+..
T Consensus 80 NHD~~~~~----------------------------~~~~~~~-----l~--~~~~~~~~n~~~~~~~i~i~G~~~~~~~ 124 (232)
T cd07393 80 NHDYWWGS----------------------------ASKLRKA-----LE--ESRLALLFNNAYIDDDVAICGTRGWDNP 124 (232)
T ss_pred CccccCCC----------------------------HHHHHHH-----HH--hcCeEEeccCcEEECCEEEEEEEeeCCC
Confidence 99975210 1111111 11 12344454777888899999975 3321
Q ss_pred CCCCC-c--------c----cCchhhhhhhccCCC----CCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCc
Q psy12823 182 FCKWA-F--------N----VPRGEACLSKWQDIP----ADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPK 244 (295)
Q Consensus 182 ~~~~~-~--------~----~~~~~~~~~~~~~~~----~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~ 244 (295)
...|. + . ..+.+++.+.+...+ +++.|+++|+||.... .+...+.+.+ ++.+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~--------~~~~~~~~~~-~~~~v~ 195 (232)
T cd07393 125 GNPWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN--------GDDSPISKLI-EEYGVD 195 (232)
T ss_pred CCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC--------CCHHHHHHHH-HHcCCC
Confidence 11110 0 0 001122223333221 1368999999997431 2334677777 577999
Q ss_pred EEEeccccCCCCee-----ecCcEEEEeCCcCCCCCC
Q psy12823 245 YHVFGHVHEGYGIT-----SDGRIIFINASTCDLNYL 276 (295)
Q Consensus 245 ~~l~GH~H~~~~~~-----~~g~~~~vn~g~~~~~~~ 276 (295)
+++|||+|...... ..|.+.+++|++| .+|.
T Consensus 196 ~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~-~~~~ 231 (232)
T cd07393 196 ICVYGHLHGVGRDRAINGERGGIRYQLVSADY-LNFQ 231 (232)
T ss_pred EEEECCCCCCcccccccceECCEEEEEEcchh-cCcc
Confidence 99999999886422 4455555555554 4554
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=150.26 Aligned_cols=152 Identities=20% Similarity=0.244 Sum_probs=93.2
Q ss_pred EEEEccCCCCCcccc------ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR------FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLS 117 (295)
Q Consensus 44 I~~iSDlH~~~~~l~------~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~ 117 (295)
|+++||+|++..... ....++|+|+++||+++.+...+... ...+.... .|+++|+||||.+
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~~~-~~v~~v~GNHD~~---------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALKGF-EPVIYVPGNHEFY---------- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhcCC-ccEEEeCCCcceE----------
Confidence 579999999875431 23468999999999999776544332 12222222 4899999999963
Q ss_pred CCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeec-CCCCCCCCCcccCchhhhh
Q psy12823 118 SCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTP-WQPEFCKWAFNVPRGEACL 196 (295)
Q Consensus 118 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~-~~~~~~~~~~~~~~~~~~~ 196 (295)
++|.|.+ |+. +.+ ...+.+.
T Consensus 69 -----------------------------------------------------~~~~G~~~w~~----~~~--~~~~~~~ 89 (166)
T cd07404 69 -----------------------------------------------------VRIIGTTLWSD----ISL--FGEAAAR 89 (166)
T ss_pred -----------------------------------------------------EEEEeeecccc----cCc--cchHHHH
Confidence 2344544 432 110 0111222
Q ss_pred hhccCCCCCccEEEecCCCCCCC-CCCcC-CCc--cCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeC
Q psy12823 197 SKWQDIPADTDVLISHTPPIGHG-DLCCT-GLR--AGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINA 268 (295)
Q Consensus 197 ~~~~~~~~~~~IlvtH~pp~~~~-D~~~~-~~~--~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~ 268 (295)
..+... .++.|++||+||.... +.... +.. .++..+.+.+ ++.++++|+|||+|........|.++++||
T Consensus 90 ~~~~d~-~~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~v~~~i~GH~H~~~~~~~~g~~~~~np 163 (166)
T cd07404 90 MRMNDF-RGKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLI-LADPIDLWIHGHTHFNFDYRIGGTRVLSNQ 163 (166)
T ss_pred hCCCCC-CCCEEEEeCCCCCccccCccccCCCcchhhhhccHhHH-hhcCCCEEEECCccccceEEECCEEEEecC
Confidence 222222 2678999999998542 11111 111 2333455666 578999999999999987766666677776
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-19 Score=154.54 Aligned_cols=185 Identities=17% Similarity=0.224 Sum_probs=118.9
Q ss_pred ceEEEEEccCCCCCcc----c-----cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC-CCcEEEEcCCCCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPH----I-----RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP-HKHKLVIAGNHELSFDP 110 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~----l-----~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~-~~pv~~V~GNHD~~~~~ 110 (295)
+|||+++||+|..... + ..+..++|+|+++||+++.+.... ..+.+.++++. ..|+++++||||.+...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~-~~~~~~l~~l~~~~~v~~v~GNHD~~~~~ 79 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVL-ELLLELLKKLKAPLGVYAVLGNHDYYSGD 79 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh-HHHHHHHhccCCCCCEEEECCCcccccCc
Confidence 5899999999997542 2 124468999999999999765443 35566666653 24899999999985321
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEc--c--eEEEeecCCCCCCCCC
Q psy12823 111 TFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILY--G--IKFYGTPWQPEFCKWA 186 (295)
Q Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~--g--v~i~G~~~~~~~~~~~ 186 (295)
.. .+. +.. ...++.+|.++...+. + +.++|..+.. .
T Consensus 80 ~~----------------------------~~~-----~~l--~~~~v~~L~~~~~~~~~~~~~i~i~G~~~~~-----~ 119 (223)
T cd07385 80 EE----------------------------NWI-----EAL--ESAGITVLRNESVEISVGGATIGIAGVDDGL-----G 119 (223)
T ss_pred hH----------------------------HHH-----HHH--HHcCCEEeecCcEEeccCCeEEEEEeccCcc-----c
Confidence 10 000 001 1246788888776663 3 6667744211 0
Q ss_pred cccCchhhhhhhccCC-CCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCe--------
Q psy12823 187 FNVPRGEACLSKWQDI-PADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGI-------- 257 (295)
Q Consensus 187 ~~~~~~~~~~~~~~~~-~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~-------- 257 (295)
... .+.+.+... ++...|+++|.|-.. + .+ ....++++++||+|.++..
T Consensus 120 -~~~---~~~~~~~~~~~~~~~I~l~H~P~~~--~---------------~~-~~~~~dl~l~GHtHggqi~~~~~~~~~ 177 (223)
T cd07385 120 -RRP---DLEKALKGLDEDDPNILLAHQPDTA--E---------------EA-AAWGVDLQLSGHTHGGQIRLPGIGPLV 177 (223)
T ss_pred -cCC---CHHHHHhCCCCCCCEEEEecCCChh--H---------------Hh-cccCccEEEeccCCCCEEecccccccc
Confidence 111 112222222 346889999997421 0 11 2567899999999987531
Q ss_pred -------------eecCcEEEEeCCcCCC--CCCCCCCCEEEEecC
Q psy12823 258 -------------TSDGRIIFINASTCDL--NYLPTNPPIVFDIAL 288 (295)
Q Consensus 258 -------------~~~g~~~~vn~g~~~~--~~~~~~~~~~~~~~~ 288 (295)
...+..++|+.|.+.. .+|.+++|+|+.+.|
T Consensus 178 ~~~~~~~~~~G~~~~~~~~~~Vs~G~G~~~~~~R~~~~pEi~~i~l 223 (223)
T cd07385 178 LSKLARPYDYGLYRKGGSQLYVSRGLGTWGPPLRLGCPPEITLITL 223 (223)
T ss_pred chhhcCcccceEEEECCEEEEEcCCccCCCCchhcCCCCcEEEEEC
Confidence 1234578999999975 699999999988765
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=155.63 Aligned_cols=200 Identities=17% Similarity=0.107 Sum_probs=117.5
Q ss_pred eEEEEEccCCCCCcc-------------c-----cccCCCCcEEEEcCCCCCCCCH---HHHHHHHHHHhcCCCCcEEEE
Q psy12823 42 VRVVCMSDTHSLTPH-------------I-----RFNIPDGDIFIHAGDFTRCGGE---EEVTEFNTWIGNLPHKHKLVI 100 (295)
Q Consensus 42 mrI~~iSDlH~~~~~-------------l-----~~~~~~~D~viiaGDl~~~g~~---~e~~~~~~~L~~l~~~pv~~V 100 (295)
+||+++||+|..... + ..+..++|+||++||+++.+.. ++++.+.+.++++.. |++++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~-p~~~v 79 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKG-PVHHV 79 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCC-CEEEe
Confidence 489999999965421 1 1234579999999999998876 778888899988874 99999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCC
Q psy12823 101 AGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQP 180 (295)
Q Consensus 101 ~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~ 180 (295)
+||||.......... ........... -+++.++++|+......
T Consensus 80 ~GNHD~~~~~~~~~~---------------------------------~~~~~~~~~~y----ysf~~~~~~~i~lds~~ 122 (267)
T cd07396 80 LGNHDLYNPSREYLL---------------------------------LYTLLGLGAPY----YSFSPGGIRFIVLDGYD 122 (267)
T ss_pred cCccccccccHhhhh---------------------------------cccccCCCCce----EEEecCCcEEEEEeCCc
Confidence 999998522110000 00000000000 02223445555433110
Q ss_pred C-CC----------------------------CC--CcccCchhhhhhhccCC--CCCccEEEecCCCCCCCCCCcCCCc
Q psy12823 181 E-FC----------------------------KW--AFNVPRGEACLSKWQDI--PADTDVLISHTPPIGHGDLCCTGLR 227 (295)
Q Consensus 181 ~-~~----------------------------~~--~~~~~~~~~~~~~~~~~--~~~~~IlvtH~pp~~~~D~~~~~~~ 227 (295)
. +. .| .....+.+++.+.++.. ...+.|+++|+||...... .....
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~-~~~~~ 201 (267)
T cd07396 123 ISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTS-PHGLL 201 (267)
T ss_pred cccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCC-ccccc
Confidence 0 00 00 11112233444444332 2346799999998643210 11122
Q ss_pred cCcHHHHHHHHhh-CCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCCCCCCCEE
Q psy12823 228 AGCVELLTTVQQR-VKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIV 283 (295)
Q Consensus 228 ~g~~~l~~~l~~~-~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~~~~~~~~ 283 (295)
....++.+++. + .++++|+|||+|........|.+.++.+|+|.. .+..+.+-
T Consensus 202 ~~~~~~~~ll~-~~~~V~~v~~GH~H~~~~~~~~gi~~~~~~a~~~~--~~~~~~~~ 255 (267)
T cd07396 202 WNHEEVLSILR-AYGCVKACISGHDHEGGYAQRHGIHFLTLEGMVET--PPESNAFG 255 (267)
T ss_pred cCHHHHHHHHH-hCCCEEEEEcCCcCCCCccccCCeeEEEechhhcC--CCCCCceE
Confidence 34467888884 5 489999999999998766777778888888865 55555553
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.5e-18 Score=137.12 Aligned_cols=124 Identities=24% Similarity=0.345 Sum_probs=96.4
Q ss_pred EEEEccCCCCCccc-----c----------ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCC--cEEEEcCCCCC
Q psy12823 44 VVCMSDTHSLTPHI-----R----------FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHK--HKLVIAGNHEL 106 (295)
Q Consensus 44 I~~iSDlH~~~~~l-----~----------~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~--pv~~V~GNHD~ 106 (295)
|+++||+|++...- . .+..++|+|+++||+++.+..+++..+.++++++... |+++|+||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~GNHD- 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPLEPVLVVPGNHD- 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccCCcEEEeCCCCe-
Confidence 68999999976421 0 1346899999999999998888888888888887653 8999999999
Q ss_pred CCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCC
Q psy12823 107 SFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWA 186 (295)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~ 186 (295)
.
T Consensus 80 ------------------------------------------------~------------------------------- 80 (144)
T cd07400 80 ------------------------------------------------V------------------------------- 80 (144)
T ss_pred ------------------------------------------------E-------------------------------
Confidence 0
Q ss_pred cccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeee---cCcE
Q psy12823 187 FNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITS---DGRI 263 (295)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~---~g~~ 263 (295)
|+++|+||....... .....+...+.+.+ ++.++++++|||+|..+.... .+.+
T Consensus 81 ---------------------iv~~Hhp~~~~~~~~-~~~~~~~~~~~~~l-~~~~~~~~l~GH~H~~~~~~~~~~~~~~ 137 (144)
T cd07400 81 ---------------------IVVLHHPLVPPPGSG-RERLLDAGDALKLL-AEAGVDLVLHGHKHVPYVGNISNAGGGL 137 (144)
T ss_pred ---------------------EEEecCCCCCCCccc-cccCCCHHHHHHHH-HHcCCCEEEECCCCCcCeeeccCCCCCE
Confidence 889999997553221 11123556788888 578999999999999986553 6789
Q ss_pred EEEeCCc
Q psy12823 264 IFINAST 270 (295)
Q Consensus 264 ~~vn~g~ 270 (295)
.++|+|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 9999985
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.3e-17 Score=143.62 Aligned_cols=209 Identities=14% Similarity=0.138 Sum_probs=117.3
Q ss_pred CCceEEEEEccCCCCCc--c--------------cc-----cc--CCCCcEEEEcCCCCCCCCHH-----HHHHHHHHHh
Q psy12823 39 PKKVRVVCMSDTHSLTP--H--------------IR-----FN--IPDGDIFIHAGDFTRCGGEE-----EVTEFNTWIG 90 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~--~--------------l~-----~~--~~~~D~viiaGDl~~~g~~~-----e~~~~~~~L~ 90 (295)
+.+.+++++||+|.+.. . ++ .+ .+++|+|+++||+++.+... +++.+.+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 46789999999999842 1 11 12 24899999999999977542 3455667777
Q ss_pred cCC-CCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEc
Q psy12823 91 NLP-HKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILY 169 (295)
Q Consensus 91 ~l~-~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~ 169 (295)
++. ..|+++++||||...... .+.+. .+...+..-. -+.+.+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~---------------------------~~~~~------~f~~~~g~~~----y~~~~~ 124 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT---------------------------EESIK------DYRDVFGDDY----FSFWVG 124 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC---------------------------hhHHH------HHHHHhCCcc----eEEEEC
Confidence 652 248999999999742110 01111 1111111100 123456
Q ss_pred ceEEEeecCCCCC--CCC-CcccCchhhhhhhccCC---CCCccEEEecCCCCCCC-CCCc---CCCccCcHHHHHHHHh
Q psy12823 170 GIKFYGTPWQPEF--CKW-AFNVPRGEACLSKWQDI---PADTDVLISHTPPIGHG-DLCC---TGLRAGCVELLTTVQQ 239 (295)
Q Consensus 170 gv~i~G~~~~~~~--~~~-~~~~~~~~~~~~~~~~~---~~~~~IlvtH~pp~~~~-D~~~---~~~~~g~~~l~~~l~~ 239 (295)
+++|+++...... ... .....+.+++.+.+++. ..+..|+++|+||.... +... ........++.+++ +
T Consensus 125 ~~~~i~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll-~ 203 (262)
T cd07395 125 GVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKF-K 203 (262)
T ss_pred CEEEEEeccccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHH-H
Confidence 7788876421100 000 11122334444444433 23578999999996321 1110 00011224677777 5
Q ss_pred hCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCCCCCCCE-EEEe
Q psy12823 240 RVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPI-VFDI 286 (295)
Q Consensus 240 ~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~~~~~~~-~~~~ 286 (295)
++++++++|||+|........+.+.++.++++. .+....+.+ ++++
T Consensus 204 ~~~V~~v~~GH~H~~~~~~~~g~~~~~~~~~~~-~~~~~~~g~~~~~v 250 (262)
T cd07395 204 KAGVKAVFSGHYHRNAGGRYGGLEMVVTSAIGA-QLGNDKSGLRIVKV 250 (262)
T ss_pred hcCceEEEECccccCCceEECCEEEEEcCceec-ccCCCCCCcEEEEE
Confidence 789999999999998876555554555655553 343333333 4444
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PHA03008 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.2e-17 Score=133.42 Aligned_cols=200 Identities=23% Similarity=0.330 Sum_probs=136.0
Q ss_pred eEEEEEccCCCCCccccccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC--CCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPT--FTHPLSSC 119 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~--~~~~~~~~ 119 (295)
|.|..+|.+.+....- -...+|+++++ .++.-....-..-+++.+... +.+++||||-|..++.. +..++
T Consensus 1 m~i~~msn~n~p~~~~--~~~~~d~~~~s-nit~~h~~n~i~~ff~~~d~~--~~~ifvpg~~dilfd~~~~~n~~~--- 72 (234)
T PHA03008 1 MHINAMSNINLPRNNK--IDEICDIAFIS-NITHIHDHNIIKIFFDKFDDF--DEIIFVPGDIDILFDDDITFNDEL--- 72 (234)
T ss_pred CceeeecccCCccccC--CcccccEEEEe-cccccccccHHHHHHhhcccc--ceEEEccCCcceEecCCceechhH---
Confidence 6788899887765421 12468888877 666655555666677777776 46999999999977652 21111
Q ss_pred CCCCccccccccCCCCCCCchhhHHHHH---hhhhhhccCCeEEccCCcEEE----cceEEEeecCCCC--CC-------
Q psy12823 120 RSPSRTMHLINEIPTLGLPRDSLTEAVK---ARNMRDRLTNCTYLQDEERIL----YGIKFYGTPWQPE--FC------- 183 (295)
Q Consensus 120 ~~~~~g~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~L~~~~~~i----~gv~i~G~~~~~~--~~------- 183 (295)
+..++ .|..||.-+. .+.+.....++.||+++.+++ ++++|+|+||+|. ++
T Consensus 73 ~h~~~-------------~rkilr~~~~~~~~~~~~~n~gnIIYLeDs~VtI~f~~rgIKIYGSP~sP~~~F~~sai~k~ 139 (234)
T PHA03008 73 HHHVH-------------NRKILRHGILKTYNENIDDNELDIIILRDDLIEFDFFDDIIKIYGQSHIEDKKFKNSHIHKA 139 (234)
T ss_pred hhHHH-------------HHHHHHhhhhhhhcccccCCCCCEEEEeCCcEEEEecCCceEEECCCCCcchhccccccccc
Confidence 11111 1333433210 122222346899999999999 7999999999997 52
Q ss_pred --CCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccc----cCCCCe
Q psy12823 184 --KWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHV----HEGYGI 257 (295)
Q Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~----H~~~~~ 257 (295)
.|+|.....++.. -|..+|+ .+||+||.||.+.+|. +.||++|++.+ .+.+|++++|||. |.+.
T Consensus 140 ~~~wAf~~~~d~~i~-wwn~IP~-tDILITHgPP~GhLD~-----~vGC~~Ll~~I-~rVKPKyHVFGh~~~~~~p~~-- 209 (234)
T PHA03008 140 LEGIAHIKKNDDEIN-YRNHIPK-CDILITASPPFAILDD-----DLACGDLFSKV-IKIKPKFHIFNGLTQFSHPNI-- 209 (234)
T ss_pred ccccccccCccccch-hhccCCC-CCEEEeCCCCcccccc-----ccCcHHHHHHH-HHhCCcEEEeCCccccCCCcE--
Confidence 2555544333222 3566785 9999999999999885 58999999999 4899999999993 3322
Q ss_pred eecCcEEEEeCCcCC
Q psy12823 258 TSDGRIIFINASTCD 272 (295)
Q Consensus 258 ~~~g~~~~vn~g~~~ 272 (295)
.......++|+....
T Consensus 210 ~~y~di~f~nsni~~ 224 (234)
T PHA03008 210 FIYKDIIFINSNINH 224 (234)
T ss_pred EEecceEEEeccccc
Confidence 356788899987754
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-17 Score=141.79 Aligned_cols=184 Identities=18% Similarity=0.160 Sum_probs=108.6
Q ss_pred EEEEEccCCCCCcc---------------cc-----ccCCCCcEEEEcCCCCCCCC--HHHHHHHHHHHhcCC--CCcEE
Q psy12823 43 RVVCMSDTHSLTPH---------------IR-----FNIPDGDIFIHAGDFTRCGG--EEEVTEFNTWIGNLP--HKHKL 98 (295)
Q Consensus 43 rI~~iSDlH~~~~~---------------l~-----~~~~~~D~viiaGDl~~~g~--~~e~~~~~~~L~~l~--~~pv~ 98 (295)
||+++||+|++... +. ....++|+|+++||+++... ..++..+.++++++. ..|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 69999999997531 11 13468999999999998654 345556777777662 35899
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEc-----cCCc----EEEc
Q psy12823 99 VIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYL-----QDEE----RILY 169 (295)
Q Consensus 99 ~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L-----~~~~----~~i~ 169 (295)
+++||||.+....... ... ...++..+ .... ....
T Consensus 81 ~~~GNHD~~~~~~~~~-------------------------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (223)
T cd00840 81 IIAGNHDSPSRLGALS-------------------------PLL-----------ALSGLHLVGVEEDVLTPLLLPKGGT 124 (223)
T ss_pred EecCCCCCcccccccc-------------------------chH-----------hhCcEEEEcccCcceeEEEeccCCe
Confidence 9999999863221100 000 01122222 1111 1123
Q ss_pred ceEEEeecCCCCCCCCCcccCchhhhhhhcc-CCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEe
Q psy12823 170 GIKFYGTPWQPEFCKWAFNVPRGEACLSKWQ-DIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVF 248 (295)
Q Consensus 170 gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~ 248 (295)
++.|+|+++... +.... ..+.+..... ..+..+.|+++|++..+...... .. .+...+.+ ...+++++++
T Consensus 125 ~v~i~g~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~--~~--~~~~~~~~-~~~~~d~v~~ 195 (223)
T cd00840 125 GVAIYGLPYLRR---SRLRD-LLADAELRPRPLDPDDFNILLLHGGVAGAGPSDS--ER--APFVPEAL-LPAGFDYVAL 195 (223)
T ss_pred EEEEEECCCCCH---HHHHH-HHHHHHHHhhccCCCCcEEEEEeeeeecCCCCcc--cc--cccCcHhh-cCcCCCEEEC
Confidence 688999986431 11000 0000111111 22456889999999876532210 00 11233334 3678999999
Q ss_pred ccccCCCCeeecCcEEEEeCCcCC
Q psy12823 249 GHVHEGYGITSDGRIIFINASTCD 272 (295)
Q Consensus 249 GH~H~~~~~~~~g~~~~vn~g~~~ 272 (295)
||+|.+... ..+++.+++||+..
T Consensus 196 GH~H~~~~~-~~~~~~~~ypGS~~ 218 (223)
T cd00840 196 GHIHRPQII-LGGGPPIVYPGSPE 218 (223)
T ss_pred CCcccCeee-cCCCceEEeCCCcc
Confidence 999998864 56778899999874
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.9e-17 Score=146.07 Aligned_cols=88 Identities=22% Similarity=0.372 Sum_probs=66.4
Q ss_pred cceeeeeeecCCCCCCCCCCceEEEEEccCCCCCccc-------cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC
Q psy12823 21 GSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHI-------RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP 93 (295)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~mrI~~iSDlH~~~~~l-------~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~ 93 (295)
+.-.+.++++..++.+....+.||+++||+|...... ......+|+|+++||+++....+......+.|+++.
T Consensus 24 ~~l~~~~~~i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~ 103 (284)
T COG1408 24 GWLRVVKLTILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK 103 (284)
T ss_pred ceEEEEEEEeecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh
Confidence 3447788888889999999999999999999976542 123345699999999998533344445666776665
Q ss_pred CC-cEEEEcCCCCCCC
Q psy12823 94 HK-HKLVIAGNHELSF 108 (295)
Q Consensus 94 ~~-pv~~V~GNHD~~~ 108 (295)
.. ++|+|.||||++.
T Consensus 104 ~~~gv~av~GNHd~~~ 119 (284)
T COG1408 104 APLGVFAVLGNHDYGV 119 (284)
T ss_pred ccCCEEEEeccccccc
Confidence 32 6999999999864
|
|
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-16 Score=141.50 Aligned_cols=65 Identities=26% Similarity=0.425 Sum_probs=55.0
Q ss_pred eEEEEEccCCCCC-ccc----------cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHh--cCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLT-PHI----------RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIG--NLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~-~~l----------~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~--~l~~~pv~~V~GNHD~~ 107 (295)
|||++|||+|... ... ..+..++|+||++|||++.+..++++.+.++|+ .++ .|++++|||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~~~~~~-~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLARLELP-APVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHhhccCC-CceEeeCCCCcCC
Confidence 7999999999983 211 134578999999999999999999999999999 554 4899999999976
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=140.62 Aligned_cols=192 Identities=19% Similarity=0.255 Sum_probs=115.7
Q ss_pred EEEEccCCCCCcccc--------ccCCCCcEEEEcCCCCCCCCHHH------------HHHHHHHHhcCCC--CcEEEEc
Q psy12823 44 VVCMSDTHSLTPHIR--------FNIPDGDIFIHAGDFTRCGGEEE------------VTEFNTWIGNLPH--KHKLVIA 101 (295)
Q Consensus 44 I~~iSDlH~~~~~l~--------~~~~~~D~viiaGDl~~~g~~~e------------~~~~~~~L~~l~~--~pv~~V~ 101 (295)
|++++|+|+....+. .+..++|+||+|||+....+..+ ...+.+++..+.. .|+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 688999999876541 12358999999999976543221 1233455544321 2689999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccC-CcEEEcceEEEeecCCC
Q psy12823 102 GNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQD-EERILYGIKFYGTPWQP 180 (295)
Q Consensus 102 GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~-~~~~i~gv~i~G~~~~~ 180 (295)
||||.. .....+ .+| .| ...|+.+|.. ++++++|++|+|++...
T Consensus 81 GNHE~~---~~l~~l------~~g------------------------g~--v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~ 125 (262)
T cd00844 81 GNHEAS---NYLWEL------PYG------------------------GW--VAPNIYYLGYAGVVNFGGLRIAGLSGIY 125 (262)
T ss_pred CCCCCH---HHHHhh------cCC------------------------Ce--ecCcEEEecCCCEEEECCeEEEEecccc
Confidence 999953 100000 000 11 1357888865 67789999999987432
Q ss_pred C---CCC-----CCcccCchhhhh-------hhccCCCCCccEEEecCCCCCCCCCCc---------------CCCccCc
Q psy12823 181 E---FCK-----WAFNVPRGEACL-------SKWQDIPADTDVLISHTPPIGHGDLCC---------------TGLRAGC 230 (295)
Q Consensus 181 ~---~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~IlvtH~pp~~~~D~~~---------------~~~~~g~ 230 (295)
. +.. ..+.......+. ..+..+..+.+|++||.||.++.+... ...+.|+
T Consensus 126 ~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs 205 (262)
T cd00844 126 KSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGS 205 (262)
T ss_pred cccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCC
Confidence 1 110 111111111110 011222347899999999998744321 0116799
Q ss_pred HHHHHHHHhhCCCcEEEeccccCCCCeee----------cCcEEEEeCCcC
Q psy12823 231 VELLTTVQQRVKPKYHVFGHVHEGYGITS----------DGRIIFINASTC 271 (295)
Q Consensus 231 ~~l~~~l~~~~~~~~~l~GH~H~~~~~~~----------~g~~~~vn~g~~ 271 (295)
+.+.+++ ++.+|+||+|||.|..+.... ...|.|++-+-|
T Consensus 206 ~~~~~ll-~~lkPryhf~gH~H~~f~~~~~~~~~~~~~~~~~TRFiaL~k~ 255 (262)
T cd00844 206 PAAEELL-KHLKPRYWFSAHLHVKFAALVPHENKSPGNTNKETKFLALDKC 255 (262)
T ss_pred HHHHHHH-HHhCCCEEEEecCCcccceecCCcccccCCCCcceEEEEcccc
Confidence 8888888 699999999999999776321 235667766655
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.4e-16 Score=127.64 Aligned_cols=146 Identities=21% Similarity=0.256 Sum_probs=92.0
Q ss_pred eEEEEEccCCCCCcccc-----ccCC-CCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNIP-DGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHP 115 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~~-~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~ 115 (295)
|||+++||+|.+...++ .+.. ++|.|+++||++. .++++.++++. .|+++|.||||.... .
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~-------~~~~~~l~~~~-~~~~~V~GN~D~~~~-~---- 67 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS-------PFVLKEFEDLA-AKVIAVRGNNDGERD-E---- 67 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC-------HHHHHHHHHhC-CceEEEccCCCchhh-h----
Confidence 89999999998775431 2333 8999999999973 14556666665 379999999995310 0
Q ss_pred CCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhh
Q psy12823 116 LSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEAC 195 (295)
Q Consensus 116 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~ 195 (295)
+ ... ..++
T Consensus 68 -----------------------------------~---~~~------~~~~---------------------------- 75 (158)
T TIGR00040 68 -----------------------------------L---PEE------EIFE---------------------------- 75 (158)
T ss_pred -----------------------------------C---Ccc------eEEE----------------------------
Confidence 0 000 0000
Q ss_pred hhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCC
Q psy12823 196 LSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNY 275 (295)
Q Consensus 196 ~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~ 275 (295)
+ .+.+|+++|..+.... .. .+....+....++++++|||+|.+.. ...++++++|||+.+..
T Consensus 76 ------~-~g~~i~l~Hg~~~~~~--------~~-~~~l~~~~~~~~~d~vi~GHtH~~~~-~~~~~~~~iNpGs~~~~- 137 (158)
T TIGR00040 76 ------A-EGIDFGLVHGDLVYPR--------GD-LLVLEYLAKELGVDVLIFGHTHIPVA-EELRGILLINPGSLTGP- 137 (158)
T ss_pred ------E-CCEEEEEEeCcccccC--------CC-HHHHHHHHhccCCCEEEECCCCCCcc-EEECCEEEEECCccccc-
Confidence 0 2456999998863211 11 12233332456889999999999885 44567899999998753
Q ss_pred CCCCCCEEEEecCCC
Q psy12823 276 LPTNPPIVFDIALPP 290 (295)
Q Consensus 276 ~~~~~~~~~~~~~~~ 290 (295)
|..++|....+++..
T Consensus 138 ~~~~~~~~~il~~~~ 152 (158)
T TIGR00040 138 RNGNTPSYAILDVDK 152 (158)
T ss_pred cCCCCCeEEEEEecC
Confidence 222245555555443
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4e-16 Score=131.90 Aligned_cols=65 Identities=20% Similarity=0.358 Sum_probs=48.4
Q ss_pred eEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCH------HHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGE------EEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~------~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|||+++||+|++...++ .+..++|.|+++||+++.+.. .+..++.+.|+++. .++++|+||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~-~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA-DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC-CceEEEccCCcch
Confidence 89999999998766431 234689999999999976531 11235667777765 3799999999964
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-16 Score=134.92 Aligned_cols=65 Identities=23% Similarity=0.308 Sum_probs=50.3
Q ss_pred eEEEEEccCCCCCcc----c---------cccCCCCcEEEEcCCCCCCCC-HHHHHHHHHHHhcCC--CCcEEEEcCCCC
Q psy12823 42 VRVVCMSDTHSLTPH----I---------RFNIPDGDIFIHAGDFTRCGG-EEEVTEFNTWIGNLP--HKHKLVIAGNHE 105 (295)
Q Consensus 42 mrI~~iSDlH~~~~~----l---------~~~~~~~D~viiaGDl~~~g~-~~e~~~~~~~L~~l~--~~pv~~V~GNHD 105 (295)
++|+++||+|..... + ..+..++|+|+++||+++.+. ..++..+.+.++.+. ..|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 489999999986542 1 123468999999999999887 677777777777653 248999999999
Q ss_pred C
Q psy12823 106 L 106 (295)
Q Consensus 106 ~ 106 (295)
.
T Consensus 81 ~ 81 (214)
T cd07399 81 L 81 (214)
T ss_pred c
Confidence 4
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.9e-16 Score=128.53 Aligned_cols=137 Identities=23% Similarity=0.241 Sum_probs=85.3
Q ss_pred eEEEEEccCCCCCcccc---ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR---FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSS 118 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~---~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~ 118 (295)
|||+++||+|++...++ ....++|.|+++||+++. +++++.+++. |+++|.||||... +.
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~~~d~vi~~GDi~~~------~~~~~~~~~~---~~~~v~GNHD~~~---~~----- 63 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYINEPDFVIILGDIFDP------EEVLELLRDI---PVYVVRGNHDNWA---FP----- 63 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHTTESEEEEES-SCSH------HHHHHHHHHH---EEEEE--CCHSTH---HH-----
T ss_pred CEEEEEeCCCCChhHHHHHHHHhcCCCEEEECCCchhH------HHHHHHHhcC---CEEEEeCCccccc---ch-----
Confidence 99999999999876541 112579999999999882 3566666654 8999999999531 00
Q ss_pred CCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhhhh
Q psy12823 119 CRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSK 198 (295)
Q Consensus 119 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~~~ 198 (295)
+. ..... +.. .
T Consensus 64 -------------------------------~~--~~~~~--~~~----------------------------------~ 74 (156)
T PF12850_consen 64 -------------------------------NE--NDEEY--LLD----------------------------------A 74 (156)
T ss_dssp -------------------------------SE--ECTCS--SHS----------------------------------E
T ss_pred -------------------------------hh--hhccc--ccc----------------------------------c
Confidence 00 00000 000 0
Q ss_pred ccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCC
Q psy12823 199 WQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLN 274 (295)
Q Consensus 199 ~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~ 274 (295)
.....++..|+++|+.+.... .+...+.+.+ ...++++++|||+|.+... ..+++.++|+|+....
T Consensus 75 ~~~~~~~~~i~~~H~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~GH~H~~~~~-~~~~~~~~~~Gs~~~~ 140 (156)
T PF12850_consen 75 LRLTIDGFKILLSHGHPYDVQ--------WDPAELREIL-SRENVDLVLHGHTHRPQVF-KIGGIHVINPGSIGGP 140 (156)
T ss_dssp EEEEETTEEEEEESSTSSSST--------TTHHHHHHHH-HHTTSSEEEESSSSSEEEE-EETTEEEEEE-GSSS-
T ss_pred eeeeecCCeEEEECCCCcccc--------cChhhhhhhh-cccCCCEEEcCCcccceEE-EECCEEEEECCcCCCC
Confidence 000013578999999987531 2233455566 4889999999999998854 4678899999998653
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.9e-15 Score=131.93 Aligned_cols=193 Identities=13% Similarity=0.143 Sum_probs=103.8
Q ss_pred EEEEccCCCCCcc------c------cccCCCCcEEEEcCCCCCCCC---------HHHHHHHHHHHhcC---CCCcEEE
Q psy12823 44 VVCMSDTHSLTPH------I------RFNIPDGDIFIHAGDFTRCGG---------EEEVTEFNTWIGNL---PHKHKLV 99 (295)
Q Consensus 44 I~~iSDlH~~~~~------l------~~~~~~~D~viiaGDl~~~g~---------~~e~~~~~~~L~~l---~~~pv~~ 99 (295)
|+++||+|++... . ..+..+||+||++||+++... .+++..+++.+... ...|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899999997542 1 124568999999999998543 22333455555432 2248999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccC-C-eEEccCCcEEEcceEEEeec
Q psy12823 100 IAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLT-N-CTYLQDEERILYGIKFYGTP 177 (295)
Q Consensus 100 V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~-~~~L~~~~~~i~gv~i~G~~ 177 (295)
|+||||.+...... .. ....+ ++..... . ..+.. ..+.+++.|+|+.
T Consensus 82 v~GNHD~~~~~~~~-~~----------------------~~~~~------~y~~~~~~~~~~~~~--~~~~~~~~~I~Ld 130 (256)
T cd07401 82 IRGNHDLFNIPSLD-SE----------------------NNYYR------KYSATGRDGSFSFSH--TTRFGNYSFIGVD 130 (256)
T ss_pred eCCCCCcCCCCCcc-ch----------------------hhHHH------HhheecCCCccceEE--EecCCCEEEEEEc
Confidence 99999986221110 00 00000 0100000 0 00100 0113578888876
Q ss_pred CCCCC--CC-----CCcccCchhhhhhhccCCC-CCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEec
Q psy12823 178 WQPEF--CK-----WAFNVPRGEACLSKWQDIP-ADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFG 249 (295)
Q Consensus 178 ~~~~~--~~-----~~~~~~~~~~~~~~~~~~~-~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~G 249 (295)
..... .. ......+.+++.+.+.+.+ .+..|+++|+|+....+.. ...+ ..+.+++ +++++++++||
T Consensus 131 t~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~~~~~~IV~~HhP~~~~~~~~---~~~~-~~~~~ll-~~~~v~~vl~G 205 (256)
T cd07401 131 PTLFPGPKRPFNFFGSLDKKLLDRLEKELEKSTNSNYTIWFGHYPTSTIISPS---AKSS-SKFKDLL-KKYNVTAYLCG 205 (256)
T ss_pred CccCCCCCCCCceeccCCHHHHHHHHHHHHhcccCCeEEEEEcccchhccCCC---cchh-HHHHHHH-HhcCCcEEEeC
Confidence 32100 00 1112223344444444433 3568999999985322111 1112 2477777 58899999999
Q ss_pred cccCCCC---eeecC--cEEEEeCCcCC
Q psy12823 250 HVHEGYG---ITSDG--RIIFINASTCD 272 (295)
Q Consensus 250 H~H~~~~---~~~~g--~~~~vn~g~~~ 272 (295)
|+|.... ....| ..++.||....
T Consensus 206 H~H~~~~~~p~h~~~~~~~~~~~p~~~~ 233 (256)
T cd07401 206 HLHPLGGLEPVHYAGHPYALITNPKPSL 233 (256)
T ss_pred CccCCCcceeeeecCCceEEEeCCCChH
Confidence 9999876 22233 34566777654
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-15 Score=119.48 Aligned_cols=61 Identities=34% Similarity=0.582 Sum_probs=45.1
Q ss_pred EEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCee----ecCcEEEEeCCc
Q psy12823 208 VLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGIT----SDGRIIFINAST 270 (295)
Q Consensus 208 IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~----~~g~~~~vn~g~ 270 (295)
|+++|+||.+..+.. .....|++.+.+.+ .+.++++++|||+|.+.... ..++|.++|++-
T Consensus 59 Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l-~~~~~~~vl~GH~H~~~~~~~~~~~~~~t~~~n~~~ 123 (129)
T cd07403 59 ILLTHAPPAGIGDGE-DFAHRGFEAFLDFI-DRFRPKLFIHGHTHLNYGYQLRIRRVGDTTVINAYG 123 (129)
T ss_pred EEEECCCCCcCcCcc-cccccCHHHHHHHH-HHHCCcEEEEcCcCCCcCccccccccCCEEEEeCCc
Confidence 777788876543221 12346777888887 57789999999999998765 478999999874
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-15 Score=120.88 Aligned_cols=167 Identities=22% Similarity=0.352 Sum_probs=105.5
Q ss_pred eEEEEEccCCCCCcc---c------------------cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEE
Q psy12823 42 VRVVCMSDTHSLTPH---I------------------RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVI 100 (295)
Q Consensus 42 mrI~~iSDlH~~~~~---l------------------~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V 100 (295)
|+|..+||+|+.... + +.....-|+|++.|||.-.-+.++.+.-+.++..++. ..|+|
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~LPG-~K~m~ 79 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAEEDLRFIGDLPG-TKYMI 79 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhhhhhhhhhhcCCC-cEEEE
Confidence 899999999986431 1 1133567999999999876667777788899999987 57999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeec-CC
Q psy12823 101 AGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTP-WQ 179 (295)
Q Consensus 101 ~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~-~~ 179 (295)
.||||+|+... ..|+ ...+...++.++.+++.++.|.|.. |.
T Consensus 80 rGNHDYWw~s~----------------------------skl~---------n~lp~~l~~~n~~f~l~n~aI~G~RgW~ 122 (230)
T COG1768 80 RGNHDYWWSSI----------------------------SKLN---------NALPPILFYLNNGFELLNYAIVGVRGWD 122 (230)
T ss_pred ecCCccccchH----------------------------HHHH---------hhcCchHhhhccceeEeeEEEEEeeccc
Confidence 99999974210 1111 1122223333556666678888865 53
Q ss_pred CCCCCC-CcccCchhh--------hh-hhccCCCC--CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEE
Q psy12823 180 PEFCKW-AFNVPRGEA--------CL-SKWQDIPA--DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHV 247 (295)
Q Consensus 180 ~~~~~~-~~~~~~~~~--------~~-~~~~~~~~--~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l 247 (295)
.....| .+.. +.++ +. ++...++. ..-|+|+|.||... |.. .| .+.+.+ ++.+++.++
T Consensus 123 s~~~~~e~~te-~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~-~~t-----~~--~~sevl-ee~rv~~~l 192 (230)
T COG1768 123 SPSFDSEPLTE-QDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSD-DGT-----PG--PFSEVL-EEGRVSKCL 192 (230)
T ss_pred CCCCCcCccch-hHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCC-CCC-----Cc--chHHHH-hhcceeeEE
Confidence 211112 1221 1111 11 12233443 35699999999843 221 22 466677 489999999
Q ss_pred eccccCCCC
Q psy12823 248 FGHVHEGYG 256 (295)
Q Consensus 248 ~GH~H~~~~ 256 (295)
+||.|....
T Consensus 193 yGHlHgv~~ 201 (230)
T COG1768 193 YGHLHGVPR 201 (230)
T ss_pred eeeccCCCC
Confidence 999998763
|
|
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.6e-14 Score=120.40 Aligned_cols=143 Identities=11% Similarity=0.160 Sum_probs=90.0
Q ss_pred EEEEEccCCCCCcc------c-c-ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCC
Q psy12823 43 RVVCMSDTHSLTPH------I-R-FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTH 114 (295)
Q Consensus 43 rI~~iSDlH~~~~~------l-~-~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~ 114 (295)
+|+++||+|+.... + + .+..++|.|++|||++. .+..+.|+++.. ++++|.||||... .+
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~-------~~~~~~l~~~~~-~~~~V~GN~D~~~--~l-- 68 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS-------KETYDYLKTIAP-DVHIVRGDFDENL--NY-- 68 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC-------HHHHHHHHhhCC-ceEEEECCCCccc--cC--
Confidence 48999999965432 1 1 12357999999999976 245566666542 7999999999531 00
Q ss_pred CCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhh
Q psy12823 115 PLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEA 194 (295)
Q Consensus 115 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~ 194 (295)
+... .+++
T Consensus 69 -----------------------------------------p~~~-----~~~~-------------------------- 76 (178)
T cd07394 69 -----------------------------------------PETK-----VITV-------------------------- 76 (178)
T ss_pred -----------------------------------------CCcE-----EEEE--------------------------
Confidence 0000 0000
Q ss_pred hhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCC
Q psy12823 195 CLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLN 274 (295)
Q Consensus 195 ~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~ 274 (295)
++.+|+++|..+.... .....+.+.. +..++++++|||+|.+.. ...++++++|||+.+.+
T Consensus 77 ---------~g~~i~l~HG~~~~~~--------~~~~~~~~~~-~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv~~~ 137 (178)
T cd07394 77 ---------GQFKIGLIHGHQVVPW--------GDPDSLAALQ-RQLDVDILISGHTHKFEA-FEHEGKFFINPGSATGA 137 (178)
T ss_pred ---------CCEEEEEEECCcCCCC--------CCHHHHHHHH-HhcCCCEEEECCCCcceE-EEECCEEEEECCCCCCC
Confidence 3467999998764221 1222344433 467889999999999874 45678999999999753
Q ss_pred C---CCCCCCEEEEecC
Q psy12823 275 Y---LPTNPPIVFDIAL 288 (295)
Q Consensus 275 ~---~~~~~~~~~~~~~ 288 (295)
. +....|....+++
T Consensus 138 ~~~~~~~~~~syail~~ 154 (178)
T cd07394 138 FSPLDPNVIPSFVLMDI 154 (178)
T ss_pred CCCCCCCCCCeEEEEEe
Confidence 2 3333445444433
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.4e-15 Score=127.25 Aligned_cols=65 Identities=15% Similarity=0.181 Sum_probs=45.8
Q ss_pred ceEEEEEccCCCCCcc---------------cc--ccCCCCcEEEEcCCCCCCCCHH-----HHHHHHHHHhcCCCCcEE
Q psy12823 41 KVRVVCMSDTHSLTPH---------------IR--FNIPDGDIFIHAGDFTRCGGEE-----EVTEFNTWIGNLPHKHKL 98 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~---------------l~--~~~~~~D~viiaGDl~~~g~~~-----e~~~~~~~L~~l~~~pv~ 98 (295)
.+||+++||+|+.... +. .+..++|+||++||+++..... .+.++++.+.+.. .|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~-~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRK-IPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcC-CCEE
Confidence 5899999999996542 00 2346899999999999865532 2333444444434 4899
Q ss_pred EEcCCCCC
Q psy12823 99 VIAGNHEL 106 (295)
Q Consensus 99 ~V~GNHD~ 106 (295)
+++||||.
T Consensus 81 ~~~GNHD~ 88 (199)
T cd07383 81 ATFGNHDG 88 (199)
T ss_pred EECccCCC
Confidence 99999994
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.1e-15 Score=133.12 Aligned_cols=207 Identities=14% Similarity=0.103 Sum_probs=111.2
Q ss_pred CCceEEEEEccCCCCCcc----c---cccCCCCcEEEEcCCCCCCCC-H--HHHHHHHHHHhcCC-CCcEEEEcCCCCCC
Q psy12823 39 PKKVRVVCMSDTHSLTPH----I---RFNIPDGDIFIHAGDFTRCGG-E--EEVTEFNTWIGNLP-HKHKLVIAGNHELS 107 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~----l---~~~~~~~D~viiaGDl~~~g~-~--~e~~~~~~~L~~l~-~~pv~~V~GNHD~~ 107 (295)
..+.||++++|+|..... + .....++|+||++||+++.+. . .++..+++.++.+. ..|++.++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 467899999999974221 1 112368999999999996443 2 45556666666541 24999999999986
Q ss_pred CCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCc
Q psy12823 108 FDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAF 187 (295)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~ 187 (295)
........ ..+. .+..+ .........+.. -+++++++.|+++...........
T Consensus 82 ~~~~~~~~------~~~~------------~~~~~-----~~~~~~~~~~~~----Ysf~~g~v~fi~Lds~~~~~~~~~ 134 (294)
T cd00839 82 YNFSFYKI------KAFF------------PRFRF-----PHSPSGSTSNLW----YSFDVGPVHFVSLSTEVDFYGDGP 134 (294)
T ss_pred cCCCCccc------cccc------------ccccc-----cCCCCCCCCCce----EEEeeCCEEEEEEecccccccCCC
Confidence 32211000 0000 00000 000000001111 135667888998763211100112
Q ss_pred ccCchhhhhhhccCCCC---CccEEEecCCCCCCCCCCcC--CCccCcHHHHHHHHhhCCCcEEEeccccCCCCee----
Q psy12823 188 NVPRGEACLSKWQDIPA---DTDVLISHTPPIGHGDLCCT--GLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGIT---- 258 (295)
Q Consensus 188 ~~~~~~~~~~~~~~~~~---~~~IlvtH~pp~~~~D~~~~--~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~---- 258 (295)
...+.+++.+.+.+... ...|+++|+|++........ ........+.+++ +++++++++|||+|......
T Consensus 135 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll-~~~~v~~vl~GH~H~y~r~~p~~~ 213 (294)
T cd00839 135 GSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLF-YKYGVDLVLSGHVHAYERTCPVYN 213 (294)
T ss_pred CcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHH-HHhCCCEEEEccceeeEeechhhC
Confidence 23344455555543322 23688889998643211100 0112224555666 58899999999999754321
Q ss_pred -----------ecCcEEEEeCCcCCC
Q psy12823 259 -----------SDGRIIFINASTCDL 273 (295)
Q Consensus 259 -----------~~g~~~~vn~g~~~~ 273 (295)
..+++.+|-.|+++.
T Consensus 214 ~~~~~~~~~~~~~~g~~yiv~G~~G~ 239 (294)
T cd00839 214 GTVVGDCNPYSNPKGPVHIVIGAGGN 239 (294)
T ss_pred CEeccccccccCCCccEEEEECCCcc
Confidence 124677787777765
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=119.14 Aligned_cols=130 Identities=22% Similarity=0.269 Sum_probs=83.9
Q ss_pred EEEEEccCCCCCcccc---ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR---FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSC 119 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~---~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~ 119 (295)
||+++||+|.+...+. ....++|.|+++||+++.+.... +. .. .|+++|+||||.... ...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~-------~~-~~-~~~~~V~GNhD~~~~---~~~---- 64 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGDVDLIIHAGDVLYPGPLNE-------LE-LK-APVIAVRGNCDGEVD---FPI---- 64 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcCCCEEEECCccccccccch-------hh-cC-CcEEEEeCCCCCcCC---ccc----
Confidence 6899999999875431 12234999999999998765322 22 22 379999999996410 000
Q ss_pred CCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhhhhc
Q psy12823 120 RSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKW 199 (295)
Q Consensus 120 ~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 199 (295)
..... .+
T Consensus 65 -----------------------------------~p~~~-----~~--------------------------------- 71 (155)
T cd00841 65 -----------------------------------LPEEA-----VL--------------------------------- 71 (155)
T ss_pred -----------------------------------CCceE-----EE---------------------------------
Confidence 00000 00
Q ss_pred cCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCC
Q psy12823 200 QDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLN 274 (295)
Q Consensus 200 ~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~ 274 (295)
.+ ++..|+++|.++....+.. .. .+.+ ...++++++|||+|.+.. ...++++++|||+.+..
T Consensus 72 -~~-~g~~i~v~Hg~~~~~~~~~--------~~-~~~~-~~~~~d~vi~GHtH~~~~-~~~~~~~~inpGs~~~~ 133 (155)
T cd00841 72 -EI-GGKRIFLTHGHLYGVKNGL--------DR-LYLA-KEGGADVVLYGHTHIPVI-EKIGGVLLLNPGSLSLP 133 (155)
T ss_pred -EE-CCEEEEEECCcccccccch--------hh-hhhh-hhcCCCEEEECcccCCcc-EEECCEEEEeCCCccCc
Confidence 00 3567999999986442210 11 2233 466789999999999985 45578899999998754
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-14 Score=117.74 Aligned_cols=133 Identities=22% Similarity=0.331 Sum_probs=90.1
Q ss_pred ceEEEEEccCCCCCccc-----cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhc-CCCCcEEEEcCCCCCCCCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHI-----RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGN-LPHKHKLVIAGNHELSFDPTFTH 114 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l-----~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~-l~~~pv~~V~GNHD~~~~~~~~~ 114 (295)
+|||+++||+|...... .....++|+||+|||++......+ +.. +. .++++|.||.|......
T Consensus 1 ~m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~~-------l~~~~~-~~i~~V~GN~D~~~~~~--- 69 (172)
T COG0622 1 MMKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLDA-------LEGGLA-AKLIAVRGNCDGEVDQE--- 69 (172)
T ss_pred CcEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchHH-------hhcccc-cceEEEEccCCCccccc---
Confidence 59999999999987421 235679999999999988654333 333 33 38999999999641100
Q ss_pred CCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhh
Q psy12823 115 PLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEA 194 (295)
Q Consensus 115 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~ 194 (295)
. .++ .+.+
T Consensus 70 ~------------------------------------------------------------~p~-----~~~~------- 77 (172)
T COG0622 70 E------------------------------------------------------------LPE-----ELVL------- 77 (172)
T ss_pred c------------------------------------------------------------CCh-----hHeE-------
Confidence 0 000 0000
Q ss_pred hhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 195 CLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 195 ~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
+ -++.+|+++|..-+.. .......+.+.+...+|++++||+|.+.. .+.++++++|||++..
T Consensus 78 ------~-~~g~ki~l~HGh~~~~---------~~~~~~l~~la~~~~~Dvli~GHTH~p~~-~~~~~i~~vNPGS~s~ 139 (172)
T COG0622 78 ------E-VGGVKIFLTHGHLYFV---------KTDLSLLEYLAKELGADVLIFGHTHKPVA-EKVGGILLVNPGSVSG 139 (172)
T ss_pred ------E-ECCEEEEEECCCcccc---------ccCHHHHHHHHHhcCCCEEEECCCCcccE-EEECCEEEEcCCCcCC
Confidence 0 1467899999865421 11134455555678899999999999884 6678899999999964
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.1e-16 Score=124.94 Aligned_cols=65 Identities=23% Similarity=0.217 Sum_probs=46.8
Q ss_pred eEEEEEccCCCCCccc---------cccCCCCcEEEEcCCCCCCCCHHHHHHHH----HHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHI---------RFNIPDGDIFIHAGDFTRCGGEEEVTEFN----TWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l---------~~~~~~~D~viiaGDl~~~g~~~e~~~~~----~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|||+++||+|+..... .....++|+||++||+++.+......... ....... .|+++++||||.+
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~GNHD~~ 78 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPK-IPVYFILGNHDYY 78 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTT-TTEEEEE-TTSSH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcc-ccccccccccccc
Confidence 8999999999987532 12357999999999999988865433322 2223333 4999999999975
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=121.73 Aligned_cols=163 Identities=17% Similarity=0.131 Sum_probs=91.6
Q ss_pred CCCCcEEEEcCCCCCCCCH-------HHHHHHHHHHhcCC-CCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccC
Q psy12823 61 IPDGDIFIHAGDFTRCGGE-------EEVTEFNTWIGNLP-HKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEI 132 (295)
Q Consensus 61 ~~~~D~viiaGDl~~~g~~-------~e~~~~~~~L~~l~-~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~ 132 (295)
..+||+||++|||++.|.. +++.++.+.+..+. ..|+++||||||..+.....
T Consensus 43 ~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~------------------- 103 (257)
T cd08163 43 QLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV------------------- 103 (257)
T ss_pred hcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-------------------
Confidence 4589999999999998763 24566666666543 24899999999985322100
Q ss_pred CCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCC-C-CCcccCchhhhhhhccCC-CCCccEE
Q psy12823 133 PTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFC-K-WAFNVPRGEACLSKWQDI-PADTDVL 209 (295)
Q Consensus 133 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~~~~Il 209 (295)
...+ +++.+.+.. .+..+++++++|+++......+ . ......+.+.+.+.+... ++.+.||
T Consensus 104 ------~~~~------~rf~~~Fg~----~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~p~IL 167 (257)
T cd08163 104 ------LPVR------QRFEKYFGP----TSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKSKPRIL 167 (257)
T ss_pred ------HHHH------HHHHHHhCC----CceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCCCcEEE
Confidence 0001 112222211 1234566778888765321000 0 011111122233333333 4568899
Q ss_pred EecCCCCCCCCCCcC-------------CC---ccCcHHHHHHHHhhCCCcEEEeccccCCCCee
Q psy12823 210 ISHTPPIGHGDLCCT-------------GL---RAGCVELLTTVQQRVKPKYHVFGHVHEGYGIT 258 (295)
Q Consensus 210 vtH~pp~~~~D~~~~-------------~~---~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~ 258 (295)
++|+|.+...+..+. +. ..=+++..+.|.+..+|.++++||.|......
T Consensus 168 l~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 168 LTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred EeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 999998743221110 00 01134566666678899999999999988654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.9e-13 Score=127.76 Aligned_cols=235 Identities=16% Similarity=0.145 Sum_probs=120.3
Q ss_pred CCCCCCChhHHHHhhccc-eeeeeeecCCCCCCCCCCceEEEEEccCCCCCcc---c-cccCCCCcEEEEcCCCCCCCCH
Q psy12823 5 IHPLTQNPTAAWKELSGS-QKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPH---I-RFNIPDGDIFIHAGDFTRCGGE 79 (295)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~mrI~~iSDlH~~~~~---l-~~~~~~~D~viiaGDl~~~g~~ 79 (295)
|..|.-+-+|+|+.-..+ ..+-..+..| ...+.||++++|+|..... + .....++|+||++||++..+..
T Consensus 107 l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p-----~~~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~ 181 (427)
T PLN02533 107 IGPLKPNTVYYYKCGGPSSTQEFSFRTPP-----SKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFY 181 (427)
T ss_pred eCCCCCCCEEEEEECCCCCccceEEECCC-----CCCCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEcCccccccch
Confidence 345555666666553211 1222222222 2368999999999864322 1 1245689999999999975432
Q ss_pred -HHHHHHHHHHhcCC-CCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCC
Q psy12823 80 -EEVTEFNTWIGNLP-HKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTN 157 (295)
Q Consensus 80 -~e~~~~~~~L~~l~-~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 157 (295)
..+..+.+.++.+. ..|++.++||||..............|..++.... .+. ....+
T Consensus 182 ~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~--------------------~~~-g~~~~ 240 (427)
T PLN02533 182 QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPF--------------------EES-GSTSN 240 (427)
T ss_pred HHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCc--------------------ccc-CCCCC
Confidence 23344555555432 24999999999975321100000000001111000 000 00001
Q ss_pred eEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhhhhccCCC--CC-ccEEEecCCCCCCCCCCc-CCCccCc-HH
Q psy12823 158 CTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIP--AD-TDVLISHTPPIGHGDLCC-TGLRAGC-VE 232 (295)
Q Consensus 158 ~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~IlvtH~pp~~~~D~~~-~~~~~g~-~~ 232 (295)
.. -+++++++.|+.++.... +.....+.+++.+.+++.. .. ..|++.|+|++....... .....+. ..
T Consensus 241 ~y----YSfd~g~vhfI~Lds~~~---~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~ 313 (427)
T PLN02533 241 LY----YSFNVYGVHIIMLGSYTD---FEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKES 313 (427)
T ss_pred ce----EEEEECCEEEEEEeCCcc---ccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHH
Confidence 11 135677888887653221 1112334445555554432 22 357889999875421110 0011122 24
Q ss_pred HHHHHHhhCCCcEEEeccccCCCCee-------ecCcEEEEeCCcCCC
Q psy12823 233 LLTTVQQRVKPKYHVFGHVHEGYGIT-------SDGRIIFINASTCDL 273 (295)
Q Consensus 233 l~~~l~~~~~~~~~l~GH~H~~~~~~-------~~g~~~~vn~g~~~~ 273 (295)
+.+++ .++++++++|||+|...... ...++++|..|.++.
T Consensus 314 le~Ll-~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~ 360 (427)
T PLN02533 314 METLL-YKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGN 360 (427)
T ss_pred HHHHH-HHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCcc
Confidence 55566 58999999999999643211 123567777777654
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=121.29 Aligned_cols=164 Identities=16% Similarity=0.156 Sum_probs=90.1
Q ss_pred eEEEEEccCCCCCcc----c-------------cccCCCCcEEEEcCCCCCCCC--H-HHHHH----HHHHHhcCCCCcE
Q psy12823 42 VRVVCMSDTHSLTPH----I-------------RFNIPDGDIFIHAGDFTRCGG--E-EEVTE----FNTWIGNLPHKHK 97 (295)
Q Consensus 42 mrI~~iSDlH~~~~~----l-------------~~~~~~~D~viiaGDl~~~g~--~-~e~~~----~~~~L~~l~~~pv 97 (295)
|||+++||+|++... + .....++|+|+++||+++... . ..... +++.|.+.+ .||
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~g-i~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAG-ITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCC-CeE
Confidence 899999999997432 1 023568999999999998742 1 22111 233454444 489
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccC-CcEEEcceEEEee
Q psy12823 98 LVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQD-EERILYGIKFYGT 176 (295)
Q Consensus 98 ~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~-~~~~i~gv~i~G~ 176 (295)
++|+||||.+........ ...+ +.....++.+.+. ..+.+.|+.+.+.
T Consensus 80 ~~I~GNHD~~~~~~~~~~---------------------~~~~----------ll~~~~~v~v~~~~~~v~i~g~~i~~l 128 (340)
T PHA02546 80 HVLVGNHDMYYKNTIRPN---------------------APTE----------LLGQYDNITVIDEPTTVDFDGCSIDLI 128 (340)
T ss_pred EEEccCCCcccccccccC---------------------chHH----------HHhhCCCEEEeCCceEEEECCEEEEEC
Confidence 999999997532111000 0001 1112345655543 4567788888888
Q ss_pred cCCCCCCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCC-C-CCCcCCCccCc-HHHHHHHHhhCCCcEEEeccccC
Q psy12823 177 PWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGH-G-DLCCTGLRAGC-VELLTTVQQRVKPKYHVFGHVHE 253 (295)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~-~-D~~~~~~~~g~-~~l~~~l~~~~~~~~~l~GH~H~ 253 (295)
||... ...+.+.+.+. +..+.|++.|....+. . .... ...|. .+ .+ .+.++++.||+|.
T Consensus 129 P~~~~--------~~~~~~~~~l~--~~~~~ill~H~~v~g~~~~~g~~--~~~~~~~~---~~---~~fdyvALGHiH~ 190 (340)
T PHA02546 129 PWICK--------ENTEEILEFIK--NSKSEYCVGHWELNGFYFYKGMK--SDHGLDPD---FL---KKYKQVWSGHFHT 190 (340)
T ss_pred CCCCH--------HHHHHHHHHhc--cCCCcEEEEeeEEecCcccCCCc--cccCCChh---Hh---ccCCEEeeccccc
Confidence 86421 01112222221 2457899999643321 0 0000 00111 11 22 2479999999998
Q ss_pred CC
Q psy12823 254 GY 255 (295)
Q Consensus 254 ~~ 255 (295)
..
T Consensus 191 ~~ 192 (340)
T PHA02546 191 IS 192 (340)
T ss_pred Cc
Confidence 65
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.6e-13 Score=119.80 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=44.3
Q ss_pred eEEEEEccCCCCCcc------c----cccCCCCcEEEEcCCCCCCC--C---HHHHHHHHHHHhcCC--CCcEEEEcCCC
Q psy12823 42 VRVVCMSDTHSLTPH------I----RFNIPDGDIFIHAGDFTRCG--G---EEEVTEFNTWIGNLP--HKHKLVIAGNH 104 (295)
Q Consensus 42 mrI~~iSDlH~~~~~------l----~~~~~~~D~viiaGDl~~~g--~---~~e~~~~~~~L~~l~--~~pv~~V~GNH 104 (295)
|||+++||+|++... + .....++|.|+++||+++.. . ......+.+.|+++. ..|+++|+|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 899999999987532 1 11335899999999999741 1 122233444444332 14899999999
Q ss_pred CCC
Q psy12823 105 ELS 107 (295)
Q Consensus 105 D~~ 107 (295)
|..
T Consensus 81 D~~ 83 (241)
T PRK05340 81 DFL 83 (241)
T ss_pred chh
Confidence 975
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=121.82 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=49.0
Q ss_pred CceEEEEEccCCCCCcc------------c-----cccCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhc---------
Q psy12823 40 KKVRVVCMSDTHSLTPH------------I-----RFNIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGN--------- 91 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~------------l-----~~~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~--------- 91 (295)
..|||+++||+|++... + .....++|+||++||+++...+ .....+++.|++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 57999999999997421 1 1235689999999999997653 344455555553
Q ss_pred ---------------------------CCCCcEEEEcCCCCCC
Q psy12823 92 ---------------------------LPHKHKLVIAGNHELS 107 (295)
Q Consensus 92 ---------------------------l~~~pv~~V~GNHD~~ 107 (295)
. ..||++|.||||..
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~-~iPVf~I~GNHD~p 123 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINV-AIPVFSIHGNHDDP 123 (405)
T ss_pred hhhccchhhhcccccccccccccccccC-CCCEEEEcCCCCCc
Confidence 1 24999999999975
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.5e-13 Score=118.25 Aligned_cols=79 Identities=18% Similarity=0.144 Sum_probs=49.4
Q ss_pred hhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeec-CcEEEEeCCc
Q psy12823 192 GEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSD-GRIIFINAST 270 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~-g~~~~vn~g~ 270 (295)
.+++.+.+++.+.+..|+++|+|+....... ........+.+++ +++++++++|||+|........ .++.++.+|+
T Consensus 154 ~~wL~~~L~~~~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~-~~~~v~~vl~GH~H~~~~~~~~~~~~~~i~~G~ 230 (277)
T cd07378 154 LAWLEKTLAASTADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLL-KKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGA 230 (277)
T ss_pred HHHHHHHHHhcCCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHH-HHcCCCEEEeCCcccceeeecCCCCcEEEEeCC
Confidence 3445555554445678999999987432111 0011124566677 5889999999999987754443 3666676666
Q ss_pred CCC
Q psy12823 271 CDL 273 (295)
Q Consensus 271 ~~~ 273 (295)
++.
T Consensus 231 ~~~ 233 (277)
T cd07378 231 GSK 233 (277)
T ss_pred Ccc
Confidence 554
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.3e-13 Score=126.07 Aligned_cols=65 Identities=25% Similarity=0.300 Sum_probs=47.3
Q ss_pred eEEEEEccCCCCCcc------------c-----cccCCCCcEEEEcCCCCCCCCHHH-----HHHHHHHHhcCCCCcEEE
Q psy12823 42 VRVVCMSDTHSLTPH------------I-----RFNIPDGDIFIHAGDFTRCGGEEE-----VTEFNTWIGNLPHKHKLV 99 (295)
Q Consensus 42 mrI~~iSDlH~~~~~------------l-----~~~~~~~D~viiaGDl~~~g~~~e-----~~~~~~~L~~l~~~pv~~ 99 (295)
|||+|+||+|++... + .....++|+||++||+++.+.+.. +.+++..|++.. .|+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~-~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTG-CQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcC-CcEEE
Confidence 899999999997421 1 023579999999999999765322 233445555554 48999
Q ss_pred EcCCCCCC
Q psy12823 100 IAGNHELS 107 (295)
Q Consensus 100 V~GNHD~~ 107 (295)
|+||||.+
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.3e-13 Score=124.92 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=50.8
Q ss_pred eEEEEEccCCCCCccc------------------cccCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhcCC--CCcEEE
Q psy12823 42 VRVVCMSDTHSLTPHI------------------RFNIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGNLP--HKHKLV 99 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l------------------~~~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~l~--~~pv~~ 99 (295)
|||+|+||+|++...+ .....++|+||+|||+++.+.+ .....+.+.|+++. ..|||+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 8999999999993221 1234689999999999998763 45556777777765 259999
Q ss_pred EcCCCCCC
Q psy12823 100 IAGNHELS 107 (295)
Q Consensus 100 V~GNHD~~ 107 (295)
|+||||..
T Consensus 81 I~GNHD~~ 88 (390)
T COG0420 81 IAGNHDSP 88 (390)
T ss_pred ecCCCCch
Confidence 99999975
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.7e-13 Score=117.57 Aligned_cols=66 Identities=21% Similarity=0.240 Sum_probs=46.1
Q ss_pred eEEEEEccCCCCCcc------------c-----cccCCCCcEEEEcCCCCCCCCHHH-----HHHHHHHHhcCCCCcEEE
Q psy12823 42 VRVVCMSDTHSLTPH------------I-----RFNIPDGDIFIHAGDFTRCGGEEE-----VTEFNTWIGNLPHKHKLV 99 (295)
Q Consensus 42 mrI~~iSDlH~~~~~------------l-----~~~~~~~D~viiaGDl~~~g~~~e-----~~~~~~~L~~l~~~pv~~ 99 (295)
|||+++||+|++... + .....++|+|+++||+++...+.. +.++++.|.+....||++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 899999999997531 1 013458999999999999765322 223344444433148999
Q ss_pred EcCCCCCC
Q psy12823 100 IAGNHELS 107 (295)
Q Consensus 100 V~GNHD~~ 107 (295)
|+||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.6e-12 Score=112.96 Aligned_cols=186 Identities=17% Similarity=0.181 Sum_probs=93.3
Q ss_pred CCCcEEEEcCCCCCCCCHHH---------HHHHHHHHhcC-CCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCcccccccc
Q psy12823 62 PDGDIFIHAGDFTRCGGEEE---------VTEFNTWIGNL-PHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINE 131 (295)
Q Consensus 62 ~~~D~viiaGDl~~~g~~~e---------~~~~~~~L~~l-~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~ 131 (295)
.++|+||++||++..+..+. .+.+.+.+++. +..||+.++||||..-...+... .+
T Consensus 67 ~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~--------~~------ 132 (296)
T cd00842 67 PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPN--------NS------ 132 (296)
T ss_pred CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCc--------cc------
Confidence 48999999999998765322 23455556553 44599999999998532211000 00
Q ss_pred CCCCCCCchhhHHH----HHhhhhhhccCCeEEccCCcEE-EcceEEEeecCCCCC--CCCCc------ccCchhhhhhh
Q psy12823 132 IPTLGLPRDSLTEA----VKARNMRDRLTNCTYLQDEERI-LYGIKFYGTPWQPEF--CKWAF------NVPRGEACLSK 198 (295)
Q Consensus 132 ~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~L~~~~~~-i~gv~i~G~~~~~~~--~~~~~------~~~~~~~~~~~ 198 (295)
.+...+.+.+. ...+.......+..| +.. ..+++|+++...... ..+.. ...+.+++.+.
T Consensus 133 ---~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY----~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~ 205 (296)
T cd00842 133 ---PSWLYDALAELWKSWLPEEAEETFKKGGYY----SVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDE 205 (296)
T ss_pred ---ccHHHHHHHHHHHhhcCHHHHHHhhcceEE----EEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHH
Confidence 00001111110 000000000011111 122 457888886521100 11111 11233444444
Q ss_pred ccCCC--CCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCC--CcEEEeccccCCCCeeec--------CcEEEE
Q psy12823 199 WQDIP--ADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVK--PKYHVFGHVHEGYGITSD--------GRIIFI 266 (295)
Q Consensus 199 ~~~~~--~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~--~~~~l~GH~H~~~~~~~~--------g~~~~v 266 (295)
+++.. ....++++|+||...... ........+.+++ +++. +..+++||+|........ ....++
T Consensus 206 L~~a~~~~~~v~I~~HiPp~~~~~~---~~~~~~~~~~~ii-~~y~~~i~~~~~GH~H~d~~~~~~~~~~~~~~~~~~~~ 281 (296)
T cd00842 206 LQEAEQAGEKVWIIGHIPPGVNSYD---TLENWSERYLQII-NRYSDTIAGQFFGHTHRDEFRVFYDDNDTGEPINVALI 281 (296)
T ss_pred HHHHHHCCCeEEEEeccCCCCcccc---cchHHHHHHHHHH-HHHHHhhheeeecccccceEEEEeCCCCCCCceEEEEe
Confidence 44331 245678999999633111 0012335677777 4664 788999999997643322 345667
Q ss_pred eCCcCC
Q psy12823 267 NASTCD 272 (295)
Q Consensus 267 n~g~~~ 272 (295)
.||...
T Consensus 282 ~psitp 287 (296)
T cd00842 282 APSVTP 287 (296)
T ss_pred cCccCc
Confidence 777653
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-10 Score=112.53 Aligned_cols=71 Identities=24% Similarity=0.354 Sum_probs=51.2
Q ss_pred CCCCceEEEEEccCCCCCccc---------c-cc---------CCCCcEEEEcCCCCCCCC--------------HHHHH
Q psy12823 37 VDPKKVRVVCMSDTHSLTPHI---------R-FN---------IPDGDIFIHAGDFTRCGG--------------EEEVT 83 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~l---------~-~~---------~~~~D~viiaGDl~~~g~--------------~~e~~ 83 (295)
.....++|+++||+|++.... . .+ ..++|.||++||+++... .+.++
T Consensus 239 ~~~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~ 318 (504)
T PRK04036 239 TKDEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYE 318 (504)
T ss_pred cCCCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHH
Confidence 446779999999999876421 0 11 457999999999997411 12345
Q ss_pred HHHHHHhcCCC-CcEEEEcCCCCCC
Q psy12823 84 EFNTWIGNLPH-KHKLVIAGNHELS 107 (295)
Q Consensus 84 ~~~~~L~~l~~-~pv~~V~GNHD~~ 107 (295)
.+.++|.+++. .||+++|||||..
T Consensus 319 ~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 319 AAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHhhhcCCeEEEecCCCcch
Confidence 67778887752 3899999999975
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.8e-12 Score=107.23 Aligned_cols=61 Identities=23% Similarity=0.249 Sum_probs=46.9
Q ss_pred eEEEEEccCCCCCcccc-----cc-CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FN-IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~-~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
+||+++||+|++...+. .. ..++|.++++||+++.|.... ++++.|.+ .++++|.||||..
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~--~~~~~l~~---~~~~~v~GNhe~~ 67 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESL--ACLELLLE---PWFHAVRGNHEQM 67 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHH--HHHHHHhc---CCEEEeECCChHH
Confidence 47999999999876542 12 246899999999999886443 56677765 3689999999975
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.9e-11 Score=98.95 Aligned_cols=47 Identities=23% Similarity=0.363 Sum_probs=31.5
Q ss_pred CCCCcEEEEcCCCCCCCCH---HHHHHHHHHHhc----CCCCcEEEEcCCCCCC
Q psy12823 61 IPDGDIFIHAGDFTRCGGE---EEVTEFNTWIGN----LPHKHKLVIAGNHELS 107 (295)
Q Consensus 61 ~~~~D~viiaGDl~~~g~~---~e~~~~~~~L~~----l~~~pv~~V~GNHD~~ 107 (295)
..+||.|+++||+++.+.. .++...++.+.+ ....|+++|+||||..
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 4689999999999987642 233232222222 1224899999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.8e-11 Score=105.40 Aligned_cols=63 Identities=25% Similarity=0.371 Sum_probs=44.1
Q ss_pred EEEccCCCCCcc--------c----ccc---CCCCcEEEEcCCCCCCCC--------------HHHHHHHHHHHhcCCC-
Q psy12823 45 VCMSDTHSLTPH--------I----RFN---IPDGDIFIHAGDFTRCGG--------------EEEVTEFNTWIGNLPH- 94 (295)
Q Consensus 45 ~~iSDlH~~~~~--------l----~~~---~~~~D~viiaGDl~~~g~--------------~~e~~~~~~~L~~l~~- 94 (295)
++|||+|++... + ... ..++|.||++||+++... .+.++.+.++|+++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999986542 1 111 136799999999998521 1234556777777752
Q ss_pred CcEEEEcCCCCCC
Q psy12823 95 KHKLVIAGNHELS 107 (295)
Q Consensus 95 ~pv~~V~GNHD~~ 107 (295)
.+|++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 4899999999975
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.4e-11 Score=103.48 Aligned_cols=62 Identities=15% Similarity=0.145 Sum_probs=40.7
Q ss_pred EEEccCCCCCcc------c-c---ccCCCCcEEEEcCCCCCCC-----CHH---HHHHHHHHHhcCCCCcEEEEcCCCCC
Q psy12823 45 VCMSDTHSLTPH------I-R---FNIPDGDIFIHAGDFTRCG-----GEE---EVTEFNTWIGNLPHKHKLVIAGNHEL 106 (295)
Q Consensus 45 ~~iSDlH~~~~~------l-~---~~~~~~D~viiaGDl~~~g-----~~~---e~~~~~~~L~~l~~~pv~~V~GNHD~ 106 (295)
+++||+|++... + + ....++|+|+++||+++.. ... ++.++++.|.+.. .||++|+||||.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~-~~v~~v~GNHD~ 80 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQG-VPCYFMHGNRDF 80 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCC-CeEEEEcCCCch
Confidence 799999987532 1 1 1123799999999999841 122 2233344444433 489999999997
Q ss_pred C
Q psy12823 107 S 107 (295)
Q Consensus 107 ~ 107 (295)
+
T Consensus 81 ~ 81 (231)
T TIGR01854 81 L 81 (231)
T ss_pred h
Confidence 5
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-11 Score=93.06 Aligned_cols=60 Identities=22% Similarity=0.235 Sum_probs=42.9
Q ss_pred EEEccCCCCCccc-------cccCCCCcEEEEcCCCCCCCCHHHHHHHH--HHHhcCCCCcEEEEcCCCC
Q psy12823 45 VCMSDTHSLTPHI-------RFNIPDGDIFIHAGDFTRCGGEEEVTEFN--TWIGNLPHKHKLVIAGNHE 105 (295)
Q Consensus 45 ~~iSDlH~~~~~l-------~~~~~~~D~viiaGDl~~~g~~~e~~~~~--~~L~~l~~~pv~~V~GNHD 105 (295)
+++||+|...... .....++|+||++||+++.+......... ..+.+.. .|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLG-IPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCC-CCEEEeCCCce
Confidence 4799999987543 12446999999999999987654433332 3334443 48999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=96.48 Aligned_cols=59 Identities=31% Similarity=0.353 Sum_probs=44.3
Q ss_pred EEEccCCCCCccc----------------------cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 45 VCMSDTHSLTPHI----------------------RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 45 ~~iSDlH~~~~~l----------------------~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
.++||+|++.... .....++|.|+++||+++.+....+ .+++++++. |+++|+|
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~---~~~l~~~~~-~~~~v~G 77 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE---LELLSRLNG-RKHLIKG 77 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH---HHHHHhCCC-CeEEEeC
Confidence 5899999986521 0123478999999999998775543 667777764 8999999
Q ss_pred CCCCC
Q psy12823 103 NHELS 107 (295)
Q Consensus 103 NHD~~ 107 (295)
|||..
T Consensus 78 NHD~~ 82 (168)
T cd07390 78 NHDSS 82 (168)
T ss_pred CCCch
Confidence 99964
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >KOG2863|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.4e-11 Score=106.39 Aligned_cols=179 Identities=20% Similarity=0.333 Sum_probs=112.0
Q ss_pred eEEEEEccCCCCCcccc-----c---cCCCCcEEEEcCCCCCCCC---------HHHHHHHHHHHh---c-CCC-CcEEE
Q psy12823 42 VRVVCMSDTHSLTPHIR-----F---NIPDGDIFIHAGDFTRCGG---------EEEVTEFNTWIG---N-LPH-KHKLV 99 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~---~~~~~D~viiaGDl~~~g~---------~~e~~~~~~~L~---~-l~~-~pv~~ 99 (295)
|||++-+-.|+...++. . ...++|++++|||+-.-.+ +..|++.-++.+ . ... .+++|
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 89999999999887651 1 2358999999999854322 234444444443 2 221 25699
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccC-CcEEEcceEEEeecC
Q psy12823 100 IAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQD-EERILYGIKFYGTPW 178 (295)
Q Consensus 100 V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~-~~~~i~gv~i~G~~~ 178 (295)
|-|||+.. .. +.|+|. +.|. .+|+.||.. +++.++|++|.|++.
T Consensus 81 IGGNHEAs---ny----------------L~eLpy--------------GGwV--ApNIyYlG~agVv~~~gvRIggiSG 125 (456)
T KOG2863|consen 81 IGGNHEAS---NY----------------LQELPY--------------GGWV--APNIYYLGYAGVVNFGGVRIGGISG 125 (456)
T ss_pred ecCchHHH---HH----------------HHhccc--------------Ccee--ccceEEeeecceEEECCEEEeeccc
Confidence 99999963 11 011110 1231 468899975 567899999999773
Q ss_pred --CC-CCCC----C-CcccCchhhhh-------hhccCCCCCccEEEecCCCCCCCCCCc---------------CCCcc
Q psy12823 179 --QP-EFCK----W-AFNVPRGEACL-------SKWQDIPADTDVLISHTPPIGHGDLCC---------------TGLRA 228 (295)
Q Consensus 179 --~~-~~~~----~-~~~~~~~~~~~-------~~~~~~~~~~~IlvtH~pp~~~~D~~~---------------~~~~~ 228 (295)
.. .|.. | .+....+..+. ..+.++....+|+++|..|.++.+... .....
T Consensus 126 I~k~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkqlk~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~L 205 (456)
T KOG2863|consen 126 IYKEHDYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQLKHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKL 205 (456)
T ss_pred hhhhhhcccCCCCCCCccchhhhhhhhhhhhhhHHHHhhcCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCc
Confidence 21 1211 1 12221111111 122345567899999999987632210 12357
Q ss_pred CcHHHHHHHHhhCCCcEEEeccccCCCC
Q psy12823 229 GCVELLTTVQQRVKPKYHVFGHVHEGYG 256 (295)
Q Consensus 229 g~~~l~~~l~~~~~~~~~l~GH~H~~~~ 256 (295)
||+.+.++| ++.+|.||++.|.|.-+.
T Consensus 206 GSp~~~eLL-~~LkP~yWfsAHLH~KFa 232 (456)
T KOG2863|consen 206 GSPALEELL-EDLKPQYWFSAHLHVKFA 232 (456)
T ss_pred CChHHHHHH-HHhCcchhhhhhHhhHHh
Confidence 999888888 689999999999998764
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-10 Score=101.65 Aligned_cols=60 Identities=22% Similarity=0.361 Sum_probs=46.5
Q ss_pred EEEEEccCCCCCcccc-----cc-CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FN-IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~-~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
||++|||+|++...++ .. ..+.|.++++||++++|.... +.++.|++ ..+++|.||||..
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~--~~l~~l~~---~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL--NVLRLLNQ---PWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH--HHHHHHhh---CCcEEEECchHHH
Confidence 8999999999987652 12 247899999999999987443 56677665 2478999999964
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=3e-10 Score=95.03 Aligned_cols=48 Identities=21% Similarity=0.310 Sum_probs=32.9
Q ss_pred cCCCCcEEEEcCCCCCCCCH---HHHHHHHHHHhc----CC----CCcEEEEcCCCCCC
Q psy12823 60 NIPDGDIFIHAGDFTRCGGE---EEVTEFNTWIGN----LP----HKHKLVIAGNHELS 107 (295)
Q Consensus 60 ~~~~~D~viiaGDl~~~g~~---~e~~~~~~~L~~----l~----~~pv~~V~GNHD~~ 107 (295)
...+||.||++||+++.+.. +++.+..+.+++ .. ..|+++|+||||..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 45699999999999997652 334333333322 21 35899999999975
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.6e-10 Score=94.64 Aligned_cols=48 Identities=21% Similarity=0.311 Sum_probs=33.2
Q ss_pred cCCCCcEEEEcCCCCCCCCHH---HHHHHHHHHhc----CCCCcEEEEcCCCCCC
Q psy12823 60 NIPDGDIFIHAGDFTRCGGEE---EVTEFNTWIGN----LPHKHKLVIAGNHELS 107 (295)
Q Consensus 60 ~~~~~D~viiaGDl~~~g~~~---e~~~~~~~L~~----l~~~pv~~V~GNHD~~ 107 (295)
+..+||+|+++|||+|.|... ++.+.++.+++ -+..|+++|+||||..
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 446899999999999998742 23333323332 2234899999999974
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.6e-10 Score=96.63 Aligned_cols=63 Identities=19% Similarity=0.254 Sum_probs=48.5
Q ss_pred CceEEEEEccCCCCCcccc-----ccC-CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNI-PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~-~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
...||.+|||+|++...|. ... .+.|.++++||++++|.... +++++|.+. .+++|.||||..
T Consensus 15 ~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~--~vl~~l~~~---~~~~v~GNHE~~ 83 (218)
T PRK11439 15 QWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL--RCLQLLEEH---WVRAVRGNHEQM 83 (218)
T ss_pred CCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH--HHHHHHHcC---CceEeeCchHHH
Confidence 3458999999999987652 222 36899999999999987544 677777763 468999999964
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.7e-10 Score=90.01 Aligned_cols=49 Identities=27% Similarity=0.349 Sum_probs=36.6
Q ss_pred ccEEEecCCCCCCC--CCCc---CCCccCcHHHHHHHHhhCCCcEEEeccccCCC
Q psy12823 206 TDVLISHTPPIGHG--DLCC---TGLRAGCVELLTTVQQRVKPKYHVFGHVHEGY 255 (295)
Q Consensus 206 ~~IlvtH~pp~~~~--D~~~---~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~ 255 (295)
.+||+||.||.++. +... ...+.|++.+.+++ ++.+|+|++|||.|.-+
T Consensus 70 ~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~-~~lkPrYhf~gh~~~fy 123 (150)
T cd07380 70 VDILLTSEWPKGISKLSKVPFEETLLICGSDLIAELA-KKLKPRYHFAGLEGVFY 123 (150)
T ss_pred CCEEECCCCchhhhhhCCCcccccccCCCCHHHHHHH-HHcCCCeEeecCCCceE
Confidence 35889999998763 2211 23578998888877 68999999999998633
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.8e-09 Score=97.30 Aligned_cols=107 Identities=15% Similarity=-0.049 Sum_probs=67.5
Q ss_pred EE-EcceEEEeecCCCCCCCC--CcccCchhhhhhhccCCCCCccEEEecCCCCCCC----CCCc-CCCccCcHHHHHHH
Q psy12823 166 RI-LYGIKFYGTPWQPEFCKW--AFNVPRGEACLSKWQDIPADTDVLISHTPPIGHG----DLCC-TGLRAGCVELLTTV 237 (295)
Q Consensus 166 ~~-i~gv~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~----D~~~-~~~~~g~~~l~~~l 237 (295)
++ .++++|++++.+...+.+ .....+.+++.+.+++.+++..|+++||||.... |... ........+|.++|
T Consensus 296 Fd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n~~eLldLL 375 (496)
T TIGR03767 296 FDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNELTDPVDPGEKRHLGTELVSLL 375 (496)
T ss_pred EEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcCCCCCEEEEECCCCccccccccccccccccccCHHHHHHHH
Confidence 45 567899987643211111 2233445566666665556778999999987432 1110 01123446899999
Q ss_pred HhhC-CCcEEEeccccCCCCeee--------cCcEEEEeCCcCCC
Q psy12823 238 QQRV-KPKYHVFGHVHEGYGITS--------DGRIIFINASTCDL 273 (295)
Q Consensus 238 ~~~~-~~~~~l~GH~H~~~~~~~--------~g~~~~vn~g~~~~ 273 (295)
. ++ ++.+|+|||+|....... +.+.+-||.|+.-.
T Consensus 376 ~-~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvd 419 (496)
T TIGR03767 376 L-EHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHID 419 (496)
T ss_pred h-cCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEecccccc
Confidence 4 65 899999999999875322 24778889888743
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.5e-10 Score=96.93 Aligned_cols=61 Identities=25% Similarity=0.272 Sum_probs=43.6
Q ss_pred EEEccCCCCCcccc-----cc--------CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC------CCcEEEEcCCCC
Q psy12823 45 VCMSDTHSLTPHIR-----FN--------IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP------HKHKLVIAGNHE 105 (295)
Q Consensus 45 ~~iSDlH~~~~~l~-----~~--------~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~------~~pv~~V~GNHD 105 (295)
++|||+|++...++ .. ..+.|.++++||++++|.... +++++|.++. ..++++|.||||
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~--~vl~~l~~l~~~~~~~~~~v~~l~GNHE 78 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI--EILWLLYKLEQEAAKAGGKVHFLLGNHE 78 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH--HHHHHHHHHHHHHHhcCCeEEEeeCCCc
Confidence 47999999987642 11 247899999999999986432 4445544431 136999999999
Q ss_pred CC
Q psy12823 106 LS 107 (295)
Q Consensus 106 ~~ 107 (295)
..
T Consensus 79 ~~ 80 (208)
T cd07425 79 LM 80 (208)
T ss_pred HH
Confidence 75
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-08 Score=82.36 Aligned_cols=61 Identities=23% Similarity=0.390 Sum_probs=44.9
Q ss_pred EEEEEccCCCCCccc-------c-----------c--cCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 43 RVVCMSDTHSLTPHI-------R-----------F--NIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 43 rI~~iSDlH~~~~~l-------~-----------~--~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
.|-++||+|++...+ . . ....-|.|.+.||++-..+.+. .+.+.+++|+. -+.+|+|
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~--~a~~IlerLnG-rkhlv~G 81 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRER--AAGLILERLNG-RKHLVPG 81 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhh--HHHHHHHHcCC-cEEEeeC
Confidence 478999999987652 0 0 1245699999999987554332 56677788876 5799999
Q ss_pred CCCC
Q psy12823 103 NHEL 106 (295)
Q Consensus 103 NHD~ 106 (295)
|||.
T Consensus 82 NhDk 85 (186)
T COG4186 82 NHDK 85 (186)
T ss_pred CCCC
Confidence 9995
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.4e-09 Score=93.90 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=27.9
Q ss_pred HHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCc
Q psy12823 233 LLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINAST 270 (295)
Q Consensus 233 l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~ 270 (295)
+.+.+ ...++++++|||+|.+... ..++..++|+|+
T Consensus 181 ~~~~~-~~~~~~~~i~GH~H~~~~~-~~~~~~~~n~G~ 216 (217)
T cd07398 181 VARLA-RRKGVDGVICGHTHRPALH-ELDGKLYINLGD 216 (217)
T ss_pred HHHHH-HhcCCCEEEECCCCCCCeE-EECCEEEEECCC
Confidence 33344 4789999999999999864 445789999986
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.3e-08 Score=90.12 Aligned_cols=65 Identities=17% Similarity=0.216 Sum_probs=43.9
Q ss_pred eEEEEEccCCCCCc------cc--------cccCCCCc-EEEEcCCCCCCCCHHH---HHHHHHHHhcCCCCcEEEEcCC
Q psy12823 42 VRVVCMSDTHSLTP------HI--------RFNIPDGD-IFIHAGDFTRCGGEEE---VTEFNTWIGNLPHKHKLVIAGN 103 (295)
Q Consensus 42 mrI~~iSDlH~~~~------~l--------~~~~~~~D-~viiaGDl~~~g~~~e---~~~~~~~L~~l~~~pv~~V~GN 103 (295)
++|+++||+|+... .+ ..+...+| +++.+||+.+...... .....+.|+.+. ..++++||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g--~d~~~~GN 78 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG--YDAVTIGN 78 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC--CCEEeecc
Confidence 58999999996541 11 12334677 7789999988654322 235667777764 45788899
Q ss_pred CCCCC
Q psy12823 104 HELSF 108 (295)
Q Consensus 104 HD~~~ 108 (295)
||+.+
T Consensus 79 He~d~ 83 (252)
T cd00845 79 HEFDY 83 (252)
T ss_pred ccccc
Confidence 99853
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.2e-08 Score=88.32 Aligned_cols=64 Identities=11% Similarity=0.043 Sum_probs=39.5
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhh-CCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQR-VKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~-~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
+..|+++|.+.....+. .. .......++. ++ ..++++++||.|........+++.++.+|..+.
T Consensus 185 D~IIvl~H~g~~~~~~~--~~--~~~~~~~~la-~~~~~vD~IlgGHsH~~~~~~~~~~~~v~q~g~~g~ 249 (277)
T cd07410 185 DVVVVLAHGGFERDLEE--SL--TGENAAYELA-EEVPGIDAILTGHQHRRFPGPTVNGVPVVQPGNWGS 249 (277)
T ss_pred CEEEEEecCCcCCCccc--cc--CCccHHHHHH-hcCCCCcEEEeCCCccccccCCcCCEEEEcCChhhC
Confidence 45688899875422110 00 1111122233 33 579999999999987543567899999998754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >KOG1432|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-07 Score=85.45 Aligned_cols=60 Identities=20% Similarity=0.120 Sum_probs=41.0
Q ss_pred HHHHHHHhhCCCcEEEeccccCCCCeeecCc-EEEEeCCcCCC-CCC---CCCCCEEEEecCCCC
Q psy12823 232 ELLTTVQQRVKPKYHVFGHVHEGYGITSDGR-IIFINASTCDL-NYL---PTNPPIVFDIALPPG 291 (295)
Q Consensus 232 ~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~-~~~vn~g~~~~-~~~---~~~~~~~~~~~~~~~ 291 (295)
.+++.|....+++.++|||-|.+.-+-...+ .+++-+|.++- +|. -.++..|+++++.+.
T Consensus 289 g~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~~~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~~~~ 353 (379)
T KOG1432|consen 289 GFLTTLVNRGNVKGVFCGHDHVNDFCGELKGELWLCYGGGAGYGGYGIGGWERRARVFELDLNKD 353 (379)
T ss_pred HHHHHHHhccCcceEEeccccccceecccCCeEEEEecCCCccCCcCcCCcccceEEEEcccccc
Confidence 5666664478999999999999876555555 67777766654 344 234555777777654
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.8e-09 Score=91.09 Aligned_cols=63 Identities=21% Similarity=0.242 Sum_probs=41.4
Q ss_pred EEEccCCCCCcc----------ccccCCCCcEEEEcCCCCCC--CC---HHHHHHHHHHHhcC--CCCcEEEEcCCCCCC
Q psy12823 45 VCMSDTHSLTPH----------IRFNIPDGDIFIHAGDFTRC--GG---EEEVTEFNTWIGNL--PHKHKLVIAGNHELS 107 (295)
Q Consensus 45 ~~iSDlH~~~~~----------l~~~~~~~D~viiaGDl~~~--g~---~~e~~~~~~~L~~l--~~~pv~~V~GNHD~~ 107 (295)
++|||+|++... ++....+.|.+.+.||+++. |. .+..++..+.|+++ ...++|+++||||.-
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Dfl 80 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDFL 80 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHHH
Confidence 479999998432 12345578999999999983 21 22223444444432 224899999999963
|
|
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-07 Score=86.79 Aligned_cols=61 Identities=16% Similarity=0.173 Sum_probs=41.8
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcH----HHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCV----ELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~----~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
+-.|++-|||.+.... +.+.. .|..+| +++++++++|||.|.-.-. ..+++.++..|.++.
T Consensus 214 ~WkIVvGHhPIySsG~------hg~~~~L~~~L~PLL-~ky~VdlYisGHDH~lq~i-~~~gt~yIvSGaGs~ 278 (394)
T PTZ00422 214 DYIIVVGDKPIYSSGS------SKGDSYLSYYLLPLL-KDAQVDLYISGYDRNMEVL-TDEGTAHINCGSGGN 278 (394)
T ss_pred CeEEEEecCceeecCC------CCCCHHHHHHHHHHH-HHcCcCEEEEccccceEEe-cCCCceEEEeCcccc
Confidence 5789999999985422 22222 455555 6899999999999975533 345667777776654
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.2e-07 Score=84.47 Aligned_cols=65 Identities=17% Similarity=0.313 Sum_probs=42.8
Q ss_pred eEEEEEccCCCCCc-------c---c-----cccCCCCc-EEEEcCCCCCCCCHH---HHHHHHHHHhcCCCCcEEEEcC
Q psy12823 42 VRVVCMSDTHSLTP-------H---I-----RFNIPDGD-IFIHAGDFTRCGGEE---EVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 42 mrI~~iSDlH~~~~-------~---l-----~~~~~~~D-~viiaGDl~~~g~~~---e~~~~~~~L~~l~~~pv~~V~G 102 (295)
++|++++|+|.-.+ . + +.+..++| +++.+||+++..... +.+...+.|+.++ ..++++|
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~--~d~~~~G 78 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG--VDLACFG 78 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC--CcEEeec
Confidence 48999999993111 0 1 11334577 999999999754322 2235667777775 3578999
Q ss_pred CCCCCC
Q psy12823 103 NHELSF 108 (295)
Q Consensus 103 NHD~~~ 108 (295)
|||+.+
T Consensus 79 NHefd~ 84 (257)
T cd07406 79 NHEFDF 84 (257)
T ss_pred cccccc
Confidence 999853
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >KOG1378|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=5e-07 Score=84.80 Aligned_cols=182 Identities=19% Similarity=0.172 Sum_probs=97.6
Q ss_pred CCCCceEEEEEccCCCCCccc-----cccCCCCcEEEEcCCCCCCC-CH-HHHHHHHHHHhcCCC-CcEEEEcCCCCCCC
Q psy12823 37 VDPKKVRVVCMSDTHSLTPHI-----RFNIPDGDIFIHAGDFTRCG-GE-EEVTEFNTWIGNLPH-KHKLVIAGNHELSF 108 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~l-----~~~~~~~D~viiaGDl~~~g-~~-~e~~~~~~~L~~l~~-~pv~~V~GNHD~~~ 108 (295)
...-+.++++++|+=...... .....++|+||+.|||.... .. .....+.++++.+.. .|..++.||||...
T Consensus 143 ~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~ 222 (452)
T KOG1378|consen 143 GQDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDW 222 (452)
T ss_pred CccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccC
Confidence 455788999999986654331 12334799999999997532 22 244455555554432 48999999999864
Q ss_pred CCC--CCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCC-eEEccCCcEEEcceEEEeec-CCCC-CC
Q psy12823 109 DPT--FTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTN-CTYLQDEERILYGIKFYGTP-WQPE-FC 183 (295)
Q Consensus 109 ~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~L~~~~~~i~gv~i~G~~-~~~~-~~ 183 (295)
... |. . +..++.... +- ....+ ..| +++++++.|++++ .... +.
T Consensus 223 ~~~~~F~-~----y~~Rf~mP~---------------------~~-s~s~~~l~Y----Sfd~G~vhfv~lsse~~~~~~ 271 (452)
T KOG1378|consen 223 PPQPCFV-P----YSARFNMPG---------------------NS-SESDSNLYY----SFDVGGVHFVVLSTETYYNFL 271 (452)
T ss_pred CCccccc-c----cceeeccCC---------------------Cc-CCCCCceeE----EEeeccEEEEEEecccccccc
Confidence 321 10 0 011111000 00 00001 111 4667788898865 2221 00
Q ss_pred CCCcccCchhhhhhhccCCCC---CccEEEecCCCCCCCCCCcCCCccCc-----HHHHHHHHhhCCCcEEEeccccCCC
Q psy12823 184 KWAFNVPRGEACLSKWQDIPA---DTDVLISHTPPIGHGDLCCTGLRAGC-----VELLTTVQQRVKPKYHVFGHVHEGY 255 (295)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~---~~~IlvtH~pp~~~~D~~~~~~~~g~-----~~l~~~l~~~~~~~~~l~GH~H~~~ 255 (295)
....++. ++.+.|.++.. .-.|++.|-|-+...+.. ....|. ..|.+++ -++++|+++.||.|..-
T Consensus 272 ~~~~QY~---WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~--~~reG~~~~~~~~LE~l~-~~~~VDvvf~GHvH~YE 345 (452)
T KOG1378|consen 272 KGTAQYQ---WLERDLASVDRKKTPWLIVQGHRPMYCSSNDA--HYREGEFESMREGLEPLF-VKYKVDVVFWGHVHRYE 345 (452)
T ss_pred ccchHHH---HHHHHHHHhcccCCCeEEEEecccceecCCch--hhccCcchhhHHHHHHHH-HHhceeEEEeccceehh
Confidence 1122222 33334433322 235677787776443310 111222 2466677 48999999999999754
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.2e-08 Score=91.49 Aligned_cols=63 Identities=19% Similarity=0.372 Sum_probs=50.8
Q ss_pred eEEEEEccCCCCCcccc-----cc-CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FN-IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~-~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|++++|||+|++...+. .. ..+.|.++++||++++|.... ++++++.++.. ++++|.||||..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~--~vl~~l~~l~~-~~~~VlGNHD~~ 69 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSL--EVLRFVKSLGD-SAVTVLGNHDLH 69 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHH--HHHHHHHhcCC-CeEEEecChhHH
Confidence 79999999999987652 12 247899999999999987543 67788888753 689999999974
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.7e-07 Score=79.67 Aligned_cols=64 Identities=20% Similarity=0.293 Sum_probs=42.2
Q ss_pred eEEEEEccCCCCCcc-------c--------cccCCCCcEEEEcCCCCCCCCHHH---HHHHHHHHhcCCCCcEEEEcCC
Q psy12823 42 VRVVCMSDTHSLTPH-------I--------RFNIPDGDIFIHAGDFTRCGGEEE---VTEFNTWIGNLPHKHKLVIAGN 103 (295)
Q Consensus 42 mrI~~iSDlH~~~~~-------l--------~~~~~~~D~viiaGDl~~~g~~~e---~~~~~~~L~~l~~~pv~~V~GN 103 (295)
++|+++||+|..... + +.+..+.++++.+||+++...... -+...+.+..+.. -+++.||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~--d~~~~GN 78 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY--DAVTPGN 78 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC--cEEcccc
Confidence 589999999985321 1 112226789999999987433221 1345677777653 3577899
Q ss_pred CCCC
Q psy12823 104 HELS 107 (295)
Q Consensus 104 HD~~ 107 (295)
||+.
T Consensus 79 Hefd 82 (257)
T cd07408 79 HEFD 82 (257)
T ss_pred cccc
Confidence 9975
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.3e-08 Score=81.02 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=32.7
Q ss_pred cCCCCcEEEEcCCCCCCCC--HHH----HHHHHHHHhcCC-----------------CCcEEEEcCCCCCC
Q psy12823 60 NIPDGDIFIHAGDFTRCGG--EEE----VTEFNTWIGNLP-----------------HKHKLVIAGNHELS 107 (295)
Q Consensus 60 ~~~~~D~viiaGDl~~~g~--~~e----~~~~~~~L~~l~-----------------~~pv~~V~GNHD~~ 107 (295)
...+||.|++.|||++.+. .+| +.++.+.+-... ..+++.|+||||..
T Consensus 41 ~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG 111 (193)
T cd08164 41 FWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVG 111 (193)
T ss_pred HhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCC
Confidence 3569999999999998764 233 334444442111 24789999999974
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.4e-07 Score=88.73 Aligned_cols=73 Identities=22% Similarity=0.327 Sum_probs=55.2
Q ss_pred CCCCCCceEEEEEccCCCCCccc---------c------ccCCCCcEEEEcCCCCCC-----C---------CHHHHHHH
Q psy12823 35 TQVDPKKVRVVCMSDTHSLTPHI---------R------FNIPDGDIFIHAGDFTRC-----G---------GEEEVTEF 85 (295)
Q Consensus 35 ~~~~~~~mrI~~iSDlH~~~~~l---------~------~~~~~~D~viiaGDl~~~-----g---------~~~e~~~~ 85 (295)
.+......+++++||+|.++..+ + .-..+..+++++||+++. | ..++|+++
T Consensus 219 ~~~~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~ 298 (481)
T COG1311 219 NNTGDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEEL 298 (481)
T ss_pred CCCCCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHH
Confidence 33456778999999999987542 0 023467899999999993 1 13578889
Q ss_pred HHHHhcCCC-CcEEEEcCCCCCC
Q psy12823 86 NTWIGNLPH-KHKLVIAGNHELS 107 (295)
Q Consensus 86 ~~~L~~l~~-~pv~~V~GNHD~~ 107 (295)
.++|..++. ..|+++|||||..
T Consensus 299 A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 299 AEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHhhCCCCceEEEecCCCCcc
Confidence 999999873 3589999999974
|
|
| >KOG2679|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-07 Score=82.44 Aligned_cols=212 Identities=16% Similarity=0.128 Sum_probs=106.7
Q ss_pred CCCCCCCceEEEEEccCCCCCcc------cc----ccCCCCcEEEEcCCCCC-CCCH----HHHHHHHHHHh---cCCCC
Q psy12823 34 KTQVDPKKVRVVCMSDTHSLTPH------IR----FNIPDGDIFIHAGDFTR-CGGE----EEVTEFNTWIG---NLPHK 95 (295)
Q Consensus 34 ~~~~~~~~mrI~~iSDlH~~~~~------l~----~~~~~~D~viiaGDl~~-~g~~----~e~~~~~~~L~---~l~~~ 95 (295)
.+++++..+++++|+|+=..... +. .+..++|+||-+||-+. .|.. ..++..++-+- +|. +
T Consensus 36 ~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ-k 114 (336)
T KOG2679|consen 36 DPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ-K 114 (336)
T ss_pred CCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc-c
Confidence 34457889999999998643221 11 23468999999999654 3432 23343333332 233 5
Q ss_pred cEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEc--ceEE
Q psy12823 96 HKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILY--GIKF 173 (295)
Q Consensus 96 pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~--gv~i 173 (295)
|.|.|.||||+..+... .++ ..+++. ..+|. ...-.+...+.+++. ++++
T Consensus 115 pWy~vlGNHDyrGnV~A--Qls----------------------~~l~~~--d~RW~--c~rsf~~~ae~ve~f~v~~~~ 166 (336)
T KOG2679|consen 115 PWYSVLGNHDYRGNVEA--QLS----------------------PVLRKI--DKRWI--CPRSFYVDAEIVEMFFVDTTP 166 (336)
T ss_pred chhhhccCccccCchhh--hhh----------------------HHHHhh--cccee--cccHHhhcceeeeeecccccc
Confidence 89999999998643221 110 001110 01121 111122222223322 1222
Q ss_pred EeecC----CCCCCCCCcccCc-------hhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCC
Q psy12823 174 YGTPW----QPEFCKWAFNVPR-------GEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVK 242 (295)
Q Consensus 174 ~G~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~ 242 (295)
.+... +....+|.-..++ ..++...+++...+-.|++-|||........ .-..=.+.|+.+| ++.+
T Consensus 167 f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG--~T~eL~~~LlPiL-~~n~ 243 (336)
T KOG2679|consen 167 FMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKASRAKWKIVVGHHPIKSAGHHG--PTKELEKQLLPIL-EANG 243 (336)
T ss_pred chhhheecccccccccccCChHHHHHHHHHHHHHHHHHHhhcceEEEecccceehhhccC--ChHHHHHHHHHHH-HhcC
Confidence 22111 0011123222222 1122223333334678999999986431110 0000113455566 6899
Q ss_pred CcEEEeccccCCCCeee-cCcEEEEeCCcCCCCCCC
Q psy12823 243 PKYHVFGHVHEGYGITS-DGRIIFINASTCDLNYLP 277 (295)
Q Consensus 243 ~~~~l~GH~H~~~~~~~-~g~~~~vn~g~~~~~~~~ 277 (295)
+++.++||-|.-.-... +.++-++..|.++..++.
T Consensus 244 VdlY~nGHDHcLQhis~~e~~iqf~tSGagSkaw~g 279 (336)
T KOG2679|consen 244 VDLYINGHDHCLQHISSPESGIQFVTSGAGSKAWRG 279 (336)
T ss_pred CcEEEecchhhhhhccCCCCCeeEEeeCCcccccCC
Confidence 99999999997553332 667778887777654443
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.2e-08 Score=85.57 Aligned_cols=64 Identities=17% Similarity=0.355 Sum_probs=44.0
Q ss_pred eEEEEEccCCCCCcccc-----cc--CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcC-C-CCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FN--IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNL-P-HKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~--~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l-~-~~pv~~V~GNHD~~ 107 (295)
||+++|||+|+....+. .. ....|.|+++||++++|.... +.++.|.++ . ..++++|+||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~--~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK--DVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH--HHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 79999999998765441 11 123699999999999886432 333433222 1 13689999999964
|
|
| >KOG3325|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.3e-06 Score=69.62 Aligned_cols=131 Identities=14% Similarity=0.234 Sum_probs=87.5
Q ss_pred eEEEEEccCCCCCcc--c--ccc----CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPH--I--RFN----IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFT 113 (295)
Q Consensus 42 mrI~~iSDlH~~~~~--l--~~~----~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~ 113 (295)
|-+++++|+|..... + +++ -.+...|+++|.++.. ++.++|+.+.. -+-+|.|.-|... +
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlcs~-------e~~dylk~l~~-dvhiVrGeFD~~~--~-- 68 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLCSK-------ESYDYLKTLSS-DVHIVRGEFDENL--K-- 68 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcchH-------HHHHHHHhhCC-CcEEEecccCccc--c--
Confidence 568999999997643 3 221 2478889999997652 67788888764 5888999888421 0
Q ss_pred CCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchh
Q psy12823 114 HPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGE 193 (295)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~ 193 (295)
+| .+..+++
T Consensus 69 ------------------yP----------------------------~~kvvtv------------------------- 77 (183)
T KOG3325|consen 69 ------------------YP----------------------------ENKVVTV------------------------- 77 (183)
T ss_pred ------------------CC----------------------------ccceEEe-------------------------
Confidence 00 0111111
Q ss_pred hhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 194 ACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 194 ~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
.+.+|=++|....- .+|.++.+.++++...+|+.++||+|.-..++ .++..+||||++..
T Consensus 78 ----------GqfkIG~chGhqVi---------P~gd~~sL~~LaRqldvDILl~G~Th~f~Aye-~eg~ffvnPGSaTG 137 (183)
T KOG3325|consen 78 ----------GQFKIGLCHGHQVI---------PWGDPESLALLARQLDVDILLTGHTHKFEAYE-HEGKFFVNPGSATG 137 (183)
T ss_pred ----------ccEEEEeecCcEee---------cCCCHHHHHHHHHhcCCcEEEeCCceeEEEEE-eCCcEEeCCCcccC
Confidence 23557777766321 24455667777678899999999999866554 45668999999976
Q ss_pred CC
Q psy12823 274 NY 275 (295)
Q Consensus 274 ~~ 275 (295)
.|
T Consensus 138 Af 139 (183)
T KOG3325|consen 138 AF 139 (183)
T ss_pred CC
Confidence 43
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.9e-08 Score=87.20 Aligned_cols=64 Identities=20% Similarity=0.365 Sum_probs=47.3
Q ss_pred eEEEEEccCCCCCcccc-------ccC--------CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCC-CcEEEEcCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-------FNI--------PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPH-KHKLVIAGNHE 105 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-------~~~--------~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~-~pv~~V~GNHD 105 (295)
|||++|||+|++...|. +.. .+.|.++++||++++|.... +++++|.++.. ..+++|.||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~--evl~~l~~l~~~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSP--EVLRLVMSMVAAGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHH--HHHHHHHHHhhCCcEEEEECCcH
Confidence 79999999999987652 111 13699999999999987433 56666665421 25899999999
Q ss_pred CC
Q psy12823 106 LS 107 (295)
Q Consensus 106 ~~ 107 (295)
..
T Consensus 79 ~~ 80 (234)
T cd07423 79 NK 80 (234)
T ss_pred HH
Confidence 64
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.4e-07 Score=82.42 Aligned_cols=65 Identities=18% Similarity=0.147 Sum_probs=48.7
Q ss_pred eEEEEEccCCCCCcc--------c----------c----ccCCCCcEEEEcCCCCCCCCH-HHHHHHHHHHhcCCCCcEE
Q psy12823 42 VRVVCMSDTHSLTPH--------I----------R----FNIPDGDIFIHAGDFTRCGGE-EEVTEFNTWIGNLPHKHKL 98 (295)
Q Consensus 42 mrI~~iSDlH~~~~~--------l----------~----~~~~~~D~viiaGDl~~~g~~-~e~~~~~~~L~~l~~~pv~ 98 (295)
-+.+++||+|++... + + ....++|.||++||+.+.... .+++.+.++++++. .+++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~-~~v~ 93 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF-RDLI 93 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC-CcEE
Confidence 468999999998632 0 0 123579999999999975443 56667778888765 3899
Q ss_pred EEcCCCCCC
Q psy12823 99 VIAGNHELS 107 (295)
Q Consensus 99 ~V~GNHD~~ 107 (295)
+|+||||..
T Consensus 94 ~V~GNHD~~ 102 (225)
T TIGR00024 94 LIRGNHDAL 102 (225)
T ss_pred EECCCCCCc
Confidence 999999953
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.9e-06 Score=77.01 Aligned_cols=54 Identities=28% Similarity=0.277 Sum_probs=35.6
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCe--eecCcEEEEeCCcCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGI--TSDGRIIFINASTCDL 273 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~--~~~g~~~~vn~g~~~~ 273 (295)
+..|+++|.+... | .++.+ +...+|++++||.|..... ...++++++.+|..+.
T Consensus 185 D~iI~l~H~g~~~--~----------~~la~---~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g~~~~ 240 (264)
T cd07411 185 DVVVLLSHNGLPV--D----------VELAE---RVPGIDVILSGHTHERTPKPIIAGGGTLVVEAGSHGK 240 (264)
T ss_pred CEEEEEecCCchh--h----------HHHHh---cCCCCcEEEeCcccccccCcccccCCEEEEEcCcccc
Confidence 5668888887421 1 12332 2347899999999976532 3457889999987653
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.48 E-value=5e-06 Score=88.67 Aligned_cols=69 Identities=14% Similarity=0.155 Sum_probs=47.6
Q ss_pred CCCceEEEEEccCCCCCccc--------cccCCCCcEEEE-cCCCCCCCCHHH---HHHHHHHHhcCCCCcEEEEcCCCC
Q psy12823 38 DPKKVRVVCMSDTHSLTPHI--------RFNIPDGDIFIH-AGDFTRCGGEEE---VTEFNTWIGNLPHKHKLVIAGNHE 105 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~l--------~~~~~~~D~vii-aGDl~~~g~~~e---~~~~~~~L~~l~~~pv~~V~GNHD 105 (295)
+...++|+++||+|+..... +.+..++|.|++ +||+++...... .+..++.|..+. .-++++||||
T Consensus 657 ~~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg--~d~~~~GNHE 734 (1163)
T PRK09419 657 DNWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG--YDASTFGNHE 734 (1163)
T ss_pred CceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC--CCEEEecccc
Confidence 45669999999999765322 123457888877 999987543221 235677777764 3478999999
Q ss_pred CCC
Q psy12823 106 LSF 108 (295)
Q Consensus 106 ~~~ 108 (295)
+.+
T Consensus 735 fd~ 737 (1163)
T PRK09419 735 FDW 737 (1163)
T ss_pred ccc
Confidence 864
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=6e-06 Score=74.85 Aligned_cols=67 Identities=18% Similarity=0.195 Sum_probs=39.2
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHh-hCCCcEEEeccccCCCCee--ecCcEEEEeCCcCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQ-RVKPKYHVFGHVHEGYGIT--SDGRIIFINASTCDL 273 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~-~~~~~~~l~GH~H~~~~~~--~~g~~~~vn~g~~~~ 273 (295)
+..|+++|.......+.. .......+..+++.+ ...+|++++||+|...... ..++++++.+|..+.
T Consensus 193 D~IIvL~H~G~~~~~~~~--~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~~~~~~~v~q~g~~g~ 262 (288)
T cd07412 193 DAIVVLAHEGGSTKGGDD--TCSAASGPIADIVNRLDPDVDVVFAGHTHQAYNCTVPAGNPRLVTQAGSYGK 262 (288)
T ss_pred CEEEEEeCCCCCCCCCCc--cccccChhHHHHHhhcCCCCCEEEeCccCccccccccCcCCEEEEecChhhc
Confidence 456788998854221110 000011123333321 2478999999999987532 457899999998764
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.1e-06 Score=79.05 Aligned_cols=84 Identities=14% Similarity=0.070 Sum_probs=52.6
Q ss_pred cCchhhhhhhccCCC-CCccEEEecCCCCCCC-----CCCc-------CCCccC--cHHHHHHHHhhCCCcEEEeccccC
Q psy12823 189 VPRGEACLSKWQDIP-ADTDVLISHTPPIGHG-----DLCC-------TGLRAG--CVELLTTVQQRVKPKYHVFGHVHE 253 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~-~~~~IlvtH~pp~~~~-----D~~~-------~~~~~g--~~~l~~~l~~~~~~~~~l~GH~H~ 253 (295)
..+.+++.+.+...+ +++.++++||+|.... |... ...... ..+|.+.|.+..++..|+|||+|.
T Consensus 331 ~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 331 AKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred HHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccchhhhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 344556666676655 5677888888887431 1100 001111 147888885445899999999998
Q ss_pred CCCee--------ecCcEEEEeCCcCC
Q psy12823 254 GYGIT--------SDGRIIFINASTCD 272 (295)
Q Consensus 254 ~~~~~--------~~g~~~~vn~g~~~ 272 (295)
+...- .+++.+-|+.++.-
T Consensus 411 n~v~a~~~p~~~~pe~gFWeveTaSl~ 437 (492)
T TIGR03768 411 NTVKAFPSPDPARPEYGFWQVETASLR 437 (492)
T ss_pred ccccccCCCCCCCCcCceEEEeehhhc
Confidence 76431 23578889888874
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=3e-07 Score=81.74 Aligned_cols=61 Identities=21% Similarity=0.343 Sum_probs=48.3
Q ss_pred EEEEccCCCCCcccc-----cc-CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR-----FN-IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 44 I~~iSDlH~~~~~l~-----~~-~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
+.+|||+|++...++ .. .++.|.++++||++++|.... ++++++.++.. .+++|.||||..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~--evl~~l~~l~~-~v~~VlGNHD~~ 67 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSL--ETLRFVKSLGD-SAKTVLGNHDLH 67 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHH--HHHHHHHhcCC-CeEEEcCCchHH
Confidence 368999999987652 22 236899999999999997544 68888888763 689999999985
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.9e-07 Score=82.23 Aligned_cols=63 Identities=21% Similarity=0.334 Sum_probs=49.6
Q ss_pred eEEEEEccCCCCCcccc-----cc-CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FN-IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~-~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|++.+|||+|++...+. .. .+..|.++++||++++|.... ++++++.++.. .+++|.||||..
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl--evL~~l~~l~~-~~~~VlGNHD~~ 69 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSL--EVLRYVKSLGD-AVRLVLGNHDLH 69 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH--HHHHHHHhcCC-CeEEEEChhHHH
Confidence 67899999999987652 22 246799999999999997544 67788888753 577999999974
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.4e-06 Score=74.40 Aligned_cols=65 Identities=18% Similarity=0.218 Sum_probs=40.7
Q ss_pred eEEEEEccCCCCCcc------------------c--------cccCCCCcE-EEEcCCCCCCCCHHH---HHHHHHHHhc
Q psy12823 42 VRVVCMSDTHSLTPH------------------I--------RFNIPDGDI-FIHAGDFTRCGGEEE---VTEFNTWIGN 91 (295)
Q Consensus 42 mrI~~iSDlH~~~~~------------------l--------~~~~~~~D~-viiaGDl~~~g~~~e---~~~~~~~L~~ 91 (295)
++|++++|+|..... + +.+...++. ++-+||+++...... -+...+.++.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 479999999975321 1 012235664 555999987543211 1345677777
Q ss_pred CCCCcEEEEcCCCCCCC
Q psy12823 92 LPHKHKLVIAGNHELSF 108 (295)
Q Consensus 92 l~~~pv~~V~GNHD~~~ 108 (295)
+.. -.++.||||+.+
T Consensus 81 ~g~--D~~~lGNHefd~ 95 (281)
T cd07409 81 LGY--DAMTLGNHEFDD 95 (281)
T ss_pred cCC--CEEEeccccccC
Confidence 754 366779999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=3e-07 Score=76.93 Aligned_cols=62 Identities=19% Similarity=0.223 Sum_probs=39.5
Q ss_pred EEEccCCCCCcc--------c---------c-----ccCCCCcEEEEcCCCCCCCCH---HHHHHH-HHHHhcCCCCcEE
Q psy12823 45 VCMSDTHSLTPH--------I---------R-----FNIPDGDIFIHAGDFTRCGGE---EEVTEF-NTWIGNLPHKHKL 98 (295)
Q Consensus 45 ~~iSDlH~~~~~--------l---------~-----~~~~~~D~viiaGDl~~~g~~---~e~~~~-~~~L~~l~~~pv~ 98 (295)
+++||+|++... + + ....++|.||++||+++.... .+.... ...+.... .+++
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~-~~v~ 79 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKD-VDVI 79 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCC-CeEE
Confidence 579999998642 0 0 134689999999999975432 222111 11222222 4899
Q ss_pred EEcCCCCCC
Q psy12823 99 VIAGNHELS 107 (295)
Q Consensus 99 ~V~GNHD~~ 107 (295)
+|+||||..
T Consensus 80 ~i~GNHD~~ 88 (172)
T cd07391 80 LIRGNHDGG 88 (172)
T ss_pred EEcccCccc
Confidence 999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.9e-07 Score=80.62 Aligned_cols=64 Identities=22% Similarity=0.314 Sum_probs=45.6
Q ss_pred eEEEEEccCCCCCcccc-------ccC-------CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC-CCcEEEEcCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-------FNI-------PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP-HKHKLVIAGNHEL 106 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-------~~~-------~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~-~~pv~~V~GNHD~ 106 (295)
||+.+|||+|+....|. +.. +.-|.++++||++|+|.... ++++++.++. ...+++|.||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~--~vl~~~~~~~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL--RMIEIVWELVEKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH--HHHHHHHHHhhCCCEEEEeCccHH
Confidence 78999999999877541 111 24589999999999986432 4555554432 1269999999995
Q ss_pred C
Q psy12823 107 S 107 (295)
Q Consensus 107 ~ 107 (295)
.
T Consensus 79 ~ 79 (245)
T PRK13625 79 K 79 (245)
T ss_pred H
Confidence 3
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-05 Score=71.00 Aligned_cols=66 Identities=24% Similarity=0.341 Sum_probs=42.8
Q ss_pred CceEEEEEccCCCCCcc-------------c-------cc--cCCCCc-EEEEcCCCCCCCCHH-----HHHHHHHHHhc
Q psy12823 40 KKVRVVCMSDTHSLTPH-------------I-------RF--NIPDGD-IFIHAGDFTRCGGEE-----EVTEFNTWIGN 91 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~-------------l-------~~--~~~~~D-~viiaGDl~~~g~~~-----e~~~~~~~L~~ 91 (295)
..++|++++|+|..... + +. ....++ +++-+||+.+..... .-+...+.+..
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 46899999999975320 0 11 123455 566799998843221 22345677777
Q ss_pred CCCCcEEEEcCCCCCC
Q psy12823 92 LPHKHKLVIAGNHELS 107 (295)
Q Consensus 92 l~~~pv~~V~GNHD~~ 107 (295)
++. =.+++||||+.
T Consensus 84 mgy--Da~tlGNHEFd 97 (282)
T cd07407 84 MPY--DLLTIGNHELY 97 (282)
T ss_pred cCC--cEEeecccccC
Confidence 753 48999999985
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.7e-05 Score=67.05 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=46.0
Q ss_pred EEEEEccCCCCCccc------------c--c-------cCCCCcEEEEcCCCCCCCC--------------------HHH
Q psy12823 43 RVVCMSDTHSLTPHI------------R--F-------NIPDGDIFIHAGDFTRCGG--------------------EEE 81 (295)
Q Consensus 43 rI~~iSDlH~~~~~l------------~--~-------~~~~~D~viiaGDl~~~g~--------------------~~e 81 (295)
.|+++||+|.+.... . . ...++..||+|||.++.-. .+.
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEA 80 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHH
Confidence 389999999976531 0 0 1246678999999987321 234
Q ss_pred HHHHHHHHhcCC-CCcEEEEcCCCCCC
Q psy12823 82 VTEFNTWIGNLP-HKHKLVIAGNHELS 107 (295)
Q Consensus 82 ~~~~~~~L~~l~-~~pv~~V~GNHD~~ 107 (295)
++++.++|.++. ..||.++|||||..
T Consensus 81 ~~~ld~~l~~l~~~i~V~imPG~~Dp~ 107 (257)
T cd07387 81 VKELDNFLSQLASSVPVDLMPGEFDPA 107 (257)
T ss_pred HHHHHHHHHhhhcCCeEEECCCCCCcc
Confidence 566777787765 34899999999975
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >KOG2310|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-05 Score=75.68 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=31.5
Q ss_pred CCceEEEEEccCCCCCcc---c-------------c-ccCCCCcEEEEcCCCCCCCC
Q psy12823 39 PKKVRVVCMSDTHSLTPH---I-------------R-FNIPDGDIFIHAGDFTRCGG 78 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~---l-------------~-~~~~~~D~viiaGDl~~~g~ 78 (295)
...|||++.||.|++... . . +...++|.|++.|||+....
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 677999999999998642 1 1 24569999999999998654
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.5e-05 Score=69.02 Aligned_cols=65 Identities=14% Similarity=0.126 Sum_probs=40.2
Q ss_pred eEEEEEccCCCCCcc-------c--------cccC-----CCCcEEEEcCCCCCCCCHHH---HHHHHHHHhcCCCCcEE
Q psy12823 42 VRVVCMSDTHSLTPH-------I--------RFNI-----PDGDIFIHAGDFTRCGGEEE---VTEFNTWIGNLPHKHKL 98 (295)
Q Consensus 42 mrI~~iSDlH~~~~~-------l--------~~~~-----~~~D~viiaGDl~~~g~~~e---~~~~~~~L~~l~~~pv~ 98 (295)
++|++++|+|..... + +.+. ...-+++-+||+........ -+...+.+..+.. -.
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~--Da 78 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY--DA 78 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC--cE
Confidence 479999999996421 1 0111 23358899999986322211 1234567777753 36
Q ss_pred EEcCCCCCCC
Q psy12823 99 VIAGNHELSF 108 (295)
Q Consensus 99 ~V~GNHD~~~ 108 (295)
+++||||+.+
T Consensus 79 ~~~GNHEfD~ 88 (285)
T cd07405 79 MAVGNHEFDN 88 (285)
T ss_pred Eeeccccccc
Confidence 7779999853
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >KOG3662|consensus | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.3e-06 Score=79.72 Aligned_cols=72 Identities=21% Similarity=0.341 Sum_probs=52.0
Q ss_pred CCceEEEEEccCCCCCc----c----c---------c------ccCCCCcEEEEcCCCCCCCC---HHHHHHHHHHHhcC
Q psy12823 39 PKKVRVVCMSDTHSLTP----H----I---------R------FNIPDGDIFIHAGDFTRCGG---EEEVTEFNTWIGNL 92 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~----~----l---------~------~~~~~~D~viiaGDl~~~g~---~~e~~~~~~~L~~l 92 (295)
....||+.+||.|+-.. . | + ....+||++++.|||++.|. .+|+.+..+.++++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 68899999999998542 1 1 0 12469999999999999765 45665555555543
Q ss_pred ----CCCcEEEEcCCCCCCCCC
Q psy12823 93 ----PHKHKLVIAGNHELSFDP 110 (295)
Q Consensus 93 ----~~~pv~~V~GNHD~~~~~ 110 (295)
...+++.+|||||..+..
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~ 147 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGN 147 (410)
T ss_pred hCCCCCCeeEEeCCcccccccc
Confidence 235899999999986433
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.7e-06 Score=74.18 Aligned_cols=61 Identities=21% Similarity=0.348 Sum_probs=44.2
Q ss_pred EEEccCCCCCcccc-----ccC--------CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCC-CcEEEEcCCCCCC
Q psy12823 45 VCMSDTHSLTPHIR-----FNI--------PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPH-KHKLVIAGNHELS 107 (295)
Q Consensus 45 ~~iSDlH~~~~~l~-----~~~--------~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~-~pv~~V~GNHD~~ 107 (295)
.+|||+|++...|. ... ...|.+|++||++|+|.... +++++|.++.. ..+++|.||||..
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~--~vl~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR--ELLEIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH--HHHHHHHHhhcCCCEEEEEccCcHH
Confidence 58999999987642 111 24689999999999997543 56666666531 2589999999964
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.5e-06 Score=74.04 Aligned_cols=62 Identities=23% Similarity=0.381 Sum_probs=44.8
Q ss_pred EEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC--CCcEEEEcCCCCCCC
Q psy12823 45 VCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP--HKHKLVIAGNHELSF 108 (295)
Q Consensus 45 ~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~--~~pv~~V~GNHD~~~ 108 (295)
.++||+|+....+. ......|.+|++||++++|.... +.++++..+. ..++++|.||||...
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~--~~l~~l~~~~~~~~~~~~l~GNHe~~~ 69 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSV--EVIDLLLALKILPDNVILLRGNHEDML 69 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcH--HHHHHHHHhcCCCCcEEEEccCchhhh
Confidence 37999999876542 23357999999999999886432 4555555442 137999999999853
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00012 Score=74.44 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=37.4
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
+..|+++|..... |.. ..+.+.....+.+-..+|++++||+|..... ..+++.++-+|..+.
T Consensus 246 DvIIaLsH~G~~~--d~~----~~~~ena~~~l~~v~gID~IlgGHsH~~~~~-~ingv~vvqaG~~G~ 307 (780)
T PRK09418 246 DVIVALAHSGVDK--SGY----NVGMENASYYLTEVPGVDAVLMGHSHTEVKD-VFNGVPVVMPGVFGS 307 (780)
T ss_pred CEEEEEeccCccc--ccc----cccchhhhHHHhcCCCCCEEEECCCCCcccc-cCCCEEEEEcChhhc
Confidence 4567889998642 211 0111111111222247999999999998753 456788888887764
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.4e-05 Score=79.07 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=43.2
Q ss_pred CCceEEEEEccCCCCCcc-------------c--------cccCCCCcEEEE-cCCCCCCCCHHH------------HHH
Q psy12823 39 PKKVRVVCMSDTHSLTPH-------------I--------RFNIPDGDIFIH-AGDFTRCGGEEE------------VTE 84 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~-------------l--------~~~~~~~D~vii-aGDl~~~g~~~e------------~~~ 84 (295)
...++|++++|+|..... + +.+...++.|++ +||+.+.....+ ...
T Consensus 39 ~~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~ 118 (1163)
T PRK09419 39 LVNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHP 118 (1163)
T ss_pred ceEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCH
Confidence 357999999999986421 1 012335666555 999998543211 123
Q ss_pred HHHHHhcCCCCcEEEEcCCCCCCC
Q psy12823 85 FNTWIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 85 ~~~~L~~l~~~pv~~V~GNHD~~~ 108 (295)
..+.+..+.. =.+++||||+.+
T Consensus 119 ~i~~mN~lgy--Da~~lGNHEFd~ 140 (1163)
T PRK09419 119 MIKAMNALGY--DAGTLGNHEFNY 140 (1163)
T ss_pred HHHHHhhcCc--cEEeeccccccc
Confidence 4566666643 478899999853
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.04 E-value=6.3e-06 Score=74.06 Aligned_cols=64 Identities=23% Similarity=0.532 Sum_probs=45.1
Q ss_pred EEEEEccCCCCCcccc-----c--c----CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCC--C--cEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----F--N----IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPH--K--HKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~--~----~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~--~--pv~~V~GNHD~~ 107 (295)
++.+|||+|+....+. . . ....+.+|++||++|+|.... +++++|.++.. + .++++.||||..
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~--eVld~L~~l~~~~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR--KVIDFLISLPEKHPKQRHVFLCGNHDFA 80 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH--HHHHHHHHhhhcccccceEEEecCChHH
Confidence 6999999999987541 1 1 124678999999999997432 45566655431 1 478999999975
Q ss_pred C
Q psy12823 108 F 108 (295)
Q Consensus 108 ~ 108 (295)
+
T Consensus 81 ~ 81 (304)
T cd07421 81 F 81 (304)
T ss_pred H
Confidence 3
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00017 Score=71.26 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=45.2
Q ss_pred CCCCCceEEEEEccCCCCCc-------cc----------ccc--C-CCCcEEEEcCCCCCCCCHHHH---HHHHHHHhcC
Q psy12823 36 QVDPKKVRVVCMSDTHSLTP-------HI----------RFN--I-PDGDIFIHAGDFTRCGGEEEV---TEFNTWIGNL 92 (295)
Q Consensus 36 ~~~~~~mrI~~iSDlH~~~~-------~l----------~~~--~-~~~D~viiaGDl~~~g~~~e~---~~~~~~L~~l 92 (295)
+.....++|++++|+|+... .+ +.+ . ...-+++.+||++.......+ +...+.+..+
T Consensus 29 ~~~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~ 108 (551)
T PRK09558 29 KDKTYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI 108 (551)
T ss_pred cCCceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC
Confidence 34567899999999999753 11 111 1 223578899999874322211 2345677777
Q ss_pred CCCcEEEEcCCCCCCC
Q psy12823 93 PHKHKLVIAGNHELSF 108 (295)
Q Consensus 93 ~~~pv~~V~GNHD~~~ 108 (295)
.. =.+++||||+.+
T Consensus 109 g~--Da~tlGNHEFD~ 122 (551)
T PRK09558 109 GY--DAMAVGNHEFDN 122 (551)
T ss_pred CC--CEEcccccccCc
Confidence 53 367789999864
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00043 Score=70.76 Aligned_cols=68 Identities=16% Similarity=0.254 Sum_probs=44.4
Q ss_pred CCceEEEEEccCCCCCcc-------------c-c-------ccCCC-CcEEEEcCCCCCCCCHHHH------------HH
Q psy12823 39 PKKVRVVCMSDTHSLTPH-------------I-R-------FNIPD-GDIFIHAGDFTRCGGEEEV------------TE 84 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~-------------l-~-------~~~~~-~D~viiaGDl~~~g~~~e~------------~~ 84 (295)
...++|++++|+|..... + + .+... --+++-+||+.+......+ ..
T Consensus 113 ~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P 192 (814)
T PRK11907 113 TVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHP 192 (814)
T ss_pred ceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchH
Confidence 446999999999987431 1 0 11122 2478999999985332221 13
Q ss_pred HHHHHhcCCCCcEEEEcCCCCCCC
Q psy12823 85 FNTWIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 85 ~~~~L~~l~~~pv~~V~GNHD~~~ 108 (295)
..+.+..+.. =.+..||||+.+
T Consensus 193 ~i~amN~LGy--DA~tLGNHEFDy 214 (814)
T PRK11907 193 MYAALEALGF--DAGTLGNHEFNY 214 (814)
T ss_pred HHHHHhccCC--CEEEechhhccc
Confidence 5677777753 479999999854
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.4e-05 Score=69.49 Aligned_cols=69 Identities=20% Similarity=0.261 Sum_probs=45.9
Q ss_pred CCceEEEEEccCCCCCcc-c-------------------c--ccCCCCcEEEEcCCCCCCCC---HHHHHHHHHHHhcCC
Q psy12823 39 PKKVRVVCMSDTHSLTPH-I-------------------R--FNIPDGDIFIHAGDFTRCGG---EEEVTEFNTWIGNLP 93 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~-l-------------------~--~~~~~~D~viiaGDl~~~g~---~~e~~~~~~~L~~l~ 93 (295)
...-+.+++||+|++... + . ....+|+.||+.||+-.... ..+......+++.+.
T Consensus 17 l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~ 96 (235)
T COG1407 17 LPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD 96 (235)
T ss_pred eccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc
Confidence 445678999999998753 1 0 13469999999999987543 223333333333333
Q ss_pred CCcEEEEcCCCCCC
Q psy12823 94 HKHKLVIAGNHELS 107 (295)
Q Consensus 94 ~~pv~~V~GNHD~~ 107 (295)
..-+++|.||||.+
T Consensus 97 ~~evi~i~GNHD~~ 110 (235)
T COG1407 97 EREVIIIRGNHDNG 110 (235)
T ss_pred cCcEEEEeccCCCc
Confidence 22499999999976
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00036 Score=63.97 Aligned_cols=65 Identities=18% Similarity=0.126 Sum_probs=42.1
Q ss_pred eEEEEEccCCCCCcc------c-------cccC---CCCcEEEEcCCCCCCCCHHH-----------HHHHHHHHhcCCC
Q psy12823 42 VRVVCMSDTHSLTPH------I-------RFNI---PDGDIFIHAGDFTRCGGEEE-----------VTEFNTWIGNLPH 94 (295)
Q Consensus 42 mrI~~iSDlH~~~~~------l-------~~~~---~~~D~viiaGDl~~~g~~~e-----------~~~~~~~L~~l~~ 94 (295)
++|++++|+|..... + +... .+--+++-+||+++.+.... -+...+.+..+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~ 80 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV 80 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC
Confidence 479999999997532 1 1110 23358999999987433211 1245677777753
Q ss_pred CcEEEEcCCCCCCC
Q psy12823 95 KHKLVIAGNHELSF 108 (295)
Q Consensus 95 ~pv~~V~GNHD~~~ 108 (295)
=.+..||||+.+
T Consensus 81 --Da~tlGNHEFD~ 92 (313)
T cd08162 81 --QAIALGNHEFDL 92 (313)
T ss_pred --cEEecccccccc
Confidence 479999999854
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0007 Score=67.82 Aligned_cols=66 Identities=17% Similarity=0.258 Sum_probs=43.0
Q ss_pred ceEEEEEccCCCCCccc---------------------cccCC-CCcEEEEcCCCCCCCCHHHH-----------HHHHH
Q psy12823 41 KVRVVCMSDTHSLTPHI---------------------RFNIP-DGDIFIHAGDFTRCGGEEEV-----------TEFNT 87 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l---------------------~~~~~-~~D~viiaGDl~~~g~~~e~-----------~~~~~ 87 (295)
.++|++++|+|...... +.+.. .--+++-+||+.+......+ ....+
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~ 81 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYK 81 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHH
Confidence 47999999999975321 01111 23588999999985433322 23556
Q ss_pred HHhcCCCCcEEEEcCCCCCCC
Q psy12823 88 WIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 88 ~L~~l~~~pv~~V~GNHD~~~ 108 (295)
.+..+.. =.+..||||+.+
T Consensus 82 ~mN~lgy--Da~tlGNHEFd~ 100 (626)
T TIGR01390 82 AMNLLKY--DVGNLGNHEFNY 100 (626)
T ss_pred HHhhcCc--cEEecccccccc
Confidence 6777653 479999999853
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.001 Score=66.90 Aligned_cols=69 Identities=16% Similarity=0.257 Sum_probs=45.4
Q ss_pred CCCceEEEEEccCCCCCcc-------------c--------cccCC-CCcEEEEcCCCCCCCCHHHHH-----------H
Q psy12823 38 DPKKVRVVCMSDTHSLTPH-------------I--------RFNIP-DGDIFIHAGDFTRCGGEEEVT-----------E 84 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~-------------l--------~~~~~-~~D~viiaGDl~~~g~~~e~~-----------~ 84 (295)
....++|++++|+|..... + +.+.. .--+++-+||+.+......+. .
T Consensus 22 ~~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 22 ATVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHP 101 (649)
T ss_pred CCceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcch
Confidence 3568999999999986431 1 01112 234789999999854333221 2
Q ss_pred HHHHHhcCCCCcEEEEcCCCCCCC
Q psy12823 85 FNTWIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 85 ~~~~L~~l~~~pv~~V~GNHD~~~ 108 (295)
..+.+..+.. =.+..||||+.+
T Consensus 102 ~i~amN~lgy--Da~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDY--DVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCC--cEEeccchhhhc
Confidence 5677777753 489999999853
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00026 Score=69.37 Aligned_cols=70 Identities=16% Similarity=0.274 Sum_probs=48.3
Q ss_pred CCCCceEEEEEccCCCCCc------------cc--------cc-cCCCCcEEEEcCCCCCCCCHHH----HHHHHHHHhc
Q psy12823 37 VDPKKVRVVCMSDTHSLTP------------HI--------RF-NIPDGDIFIHAGDFTRCGGEEE----VTEFNTWIGN 91 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~------------~l--------~~-~~~~~D~viiaGDl~~~g~~~e----~~~~~~~L~~ 91 (295)
.....++|++++|+|.... .+ +. +..+..++|-+||+.+...... -+...+.|..
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~ 101 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNA 101 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhh
Confidence 4577899999999999776 21 01 1224567999999998533322 2346677777
Q ss_pred CCCCcEEEEcCCCCCCC
Q psy12823 92 LPHKHKLVIAGNHELSF 108 (295)
Q Consensus 92 l~~~pv~~V~GNHD~~~ 108 (295)
++. =.+..||||+.+
T Consensus 102 m~y--Da~tiGNHEFd~ 116 (517)
T COG0737 102 LGY--DAMTLGNHEFDY 116 (517)
T ss_pred cCC--cEEeeccccccc
Confidence 753 489999999964
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00082 Score=66.39 Aligned_cols=42 Identities=19% Similarity=0.144 Sum_probs=28.2
Q ss_pred cEEEEcCCCCCCCCHHH---HHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy12823 65 DIFIHAGDFTRCGGEEE---VTEFNTWIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 65 D~viiaGDl~~~g~~~e---~~~~~~~L~~l~~~pv~~V~GNHD~~~ 108 (295)
-+++.+||+++...... -+...+.+..+. .-.++.||||+.+
T Consensus 51 ~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g--~Da~~lGNHEFd~ 95 (550)
T TIGR01530 51 ALVLHAGDAIIGTLYFTLFGGRADAALMNAAG--FDFFTLGNHEFDA 95 (550)
T ss_pred eEEEECCCCCCCccchhhcCCHHHHHHHhccC--CCEEEeccccccC
Confidence 58889999987432211 123466777765 3589999999853
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00011 Score=65.99 Aligned_cols=64 Identities=20% Similarity=0.244 Sum_probs=45.3
Q ss_pred eEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
+++.++||+|+....+. ......+.+++.||++++|.... +.+..+..+ ....++.+.||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~--e~l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSI--EVILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChH--HHHHHHHHHHhcCCCCEEEEeccccHH
Confidence 57999999999877642 23356789999999999987432 333333322 112589999999985
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG2476|consensus | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0019 Score=60.68 Aligned_cols=194 Identities=16% Similarity=0.160 Sum_probs=110.3
Q ss_pred eEEEEEccCCCCCccc-------cccCCCCcEEEEcCCCCCCC-CHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHI-------RFNIPDGDIFIHAGDFTRCG-GEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFT 113 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l-------~~~~~~~D~viiaGDl~~~g-~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~ 113 (295)
.||++++|.-+....+ ..+....|++|+.|+++... ..+++..+.+-.+.++. |+|+.-+|--... +
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~vPi-ptY~~g~~~~~~~--k-- 80 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKVPI-PTYFLGDNANETE--K-- 80 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccCce-eEEEecCCCCccc--e--
Confidence 6999999998876654 12345799999999998743 23454555555555653 8888877764210 1
Q ss_pred CCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCC-cEEE-cceEEEeecCCCCC--CCCCccc
Q psy12823 114 HPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDE-ERIL-YGIKFYGTPWQPEF--CKWAFNV 189 (295)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~-~~~i-~gv~i~G~~~~~~~--~~~~~~~ 189 (295)
++.. ..-.+...|++||.+. .+.. .|++|.=.++.... +...|..
T Consensus 81 ---------y~~n----------------------~~g~Ei~~Nlt~Lg~~G~~~l~sGl~IaYLsG~e~~~~~~~~fs~ 129 (528)
T KOG2476|consen 81 ---------YFEN----------------------SDGKEIAENLTYLGRKGTYKLASGLTIAYLSGPESSEKGESKFSQ 129 (528)
T ss_pred ---------eccc----------------------CCCcccccceeeecccceEeecCCcEEEEeeccccccccccccCH
Confidence 1110 0111235688999864 3444 37766543321100 0012332
Q ss_pred Cchhhhhh--hccCCCCCccEEEecCCCCCCCCCC----cCCCccCcHHHHHHHHhhCCCcEEEecc--ccCCCCeee--
Q psy12823 190 PRGEACLS--KWQDIPADTDVLISHTPPIGHGDLC----CTGLRAGCVELLTTVQQRVKPKYHVFGH--VHEGYGITS-- 259 (295)
Q Consensus 190 ~~~~~~~~--~~~~~~~~~~IlvtH~pp~~~~D~~----~~~~~~g~~~l~~~l~~~~~~~~~l~GH--~H~~~~~~~-- 259 (295)
...+++.. ..+...+++||++|-.+|.++..+. ......|| .+...|+.+.+|+|+++|= +|....-.+
T Consensus 130 ~dv~~l~~~~~~~~~~~gvDILlTseWP~~v~e~~ss~~~~~~~~gs-~lvs~La~~lkPRYHFa~~~~v~YErePyrn~ 208 (528)
T KOG2476|consen 130 ADVDELRHRLDTQKEFKGVDILLTSEWPADVQERNSSLPESKRLCGS-ELVSELAAELKPRYHFAGSDGVFYEREPYRNH 208 (528)
T ss_pred HHHHHHhcccccccccCCccEEEecCCcchhhhccccCccccCCcch-HHHHHHHHhcCcceEeccCCCceeecccccch
Confidence 22223221 1123357899999999998764421 12334666 4555665689999999974 565443211
Q ss_pred -------cCcEEEEeCCcCC
Q psy12823 260 -------DGRIIFINASTCD 272 (295)
Q Consensus 260 -------~g~~~~vn~g~~~ 272 (295)
.-.|.+|+-+-.+
T Consensus 209 ~~~~~~~~h~TRFI~LA~vG 228 (528)
T KOG2476|consen 209 AALNEEAGHVTRFIALAKVG 228 (528)
T ss_pred hhhcccccceeeeeehhhcC
Confidence 1246677666554
|
|
| >KOG3770|consensus | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0008 Score=65.23 Aligned_cols=46 Identities=26% Similarity=0.379 Sum_probs=30.6
Q ss_pred CCCcEEEEcCCCCCCCC----HH----HHHHHHHHHhc-CCCCcEEEEcCCCCCC
Q psy12823 62 PDGDIFIHAGDFTRCGG----EE----EVTEFNTWIGN-LPHKHKLVIAGNHELS 107 (295)
Q Consensus 62 ~~~D~viiaGDl~~~g~----~~----e~~~~~~~L~~-l~~~pv~~V~GNHD~~ 107 (295)
.++|+|+.+||...... .+ .+..+.+.+.+ .+..|||...||||..
T Consensus 209 ~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~ 263 (577)
T KOG3770|consen 209 KDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIH 263 (577)
T ss_pred CCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCC
Confidence 45999999999987532 11 22233344443 3445899999999985
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00029 Score=64.30 Aligned_cols=63 Identities=22% Similarity=0.273 Sum_probs=44.2
Q ss_pred EEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~ 107 (295)
++.+++|+|++...+. ...+..|.+++.||++++|...- +.+..|..++ ...++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~--Evi~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSI--ECVLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChH--HHHHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 5899999999887642 23345689999999999987432 3344443331 12589999999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00035 Score=64.04 Aligned_cols=64 Identities=20% Similarity=0.239 Sum_probs=43.9
Q ss_pred eEEEEEccCCCCCcccc-----ccCC-CCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNIP-DGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~~-~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~ 107 (295)
.++.+++|+|+....+. ...+ .-+.+++.||++|+|...- +.+.+|-.++ ...++++.||||..
T Consensus 51 ~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~--Evl~ll~~lk~~~p~~v~llRGNHE~~ 123 (321)
T cd07420 51 KQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSI--EILIILFAFFLVYPNEVHLNRGNHEDH 123 (321)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcH--HHHHHHHHHhhcCCCcEEEecCchhhh
Confidence 47899999999987651 1222 3468999999999997432 3444443322 12589999999975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0004 Score=62.79 Aligned_cols=63 Identities=21% Similarity=0.198 Sum_probs=43.5
Q ss_pred EEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~ 107 (295)
++.+++|+|+....+. ......+.+++.||++++|.... +.+..+..++ ...++++.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSV--ETFLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHH--HHHHHHHHHhhcCCCcEEEEecccchH
Confidence 4899999999876642 22345678999999999987432 3333333321 12589999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00041 Score=62.95 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=43.5
Q ss_pred EEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC--C-CcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP--H-KHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~--~-~pv~~V~GNHD~~ 107 (295)
++.++||+|++...+. ...+..+-+++.||++++|.... +.+..+..++ . ..++++.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--e~i~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcH--HHHHHHHHhhhhCCCcEEEEecccchh
Confidence 5899999999876541 23345678999999999986432 3333333321 1 2589999999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00074 Score=61.88 Aligned_cols=63 Identities=17% Similarity=0.230 Sum_probs=43.5
Q ss_pred EEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC--C-CcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP--H-KHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~--~-~pv~~V~GNHD~~ 107 (295)
++.+++|+|+....+. ......+-+|+.||++++|.... +.+..+..++ . ..++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~--evl~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcH--HHHHHHHHhcccCCCceEEEecccchh
Confidence 4999999999876541 23345678899999999986432 3344443332 1 2589999999985
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00076 Score=63.01 Aligned_cols=64 Identities=23% Similarity=0.379 Sum_probs=43.4
Q ss_pred EEEEEccCCCCCcccc-----ccCCC-CcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIPD-GDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELSF 108 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~~-~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~~ 108 (295)
++.+++|+|+....+. ..... -+.+|+.||++|+|.... +.+.+|..++ ...++++.||||...
T Consensus 67 ~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~Sl--Evl~lL~~lki~~p~~v~lLRGNHE~~~ 139 (377)
T cd07418 67 EVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGL--ETFLLLLSWKVLLPDRVYLLRGNHESKF 139 (377)
T ss_pred CEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChH--HHHHHHHHHhhccCCeEEEEeeeccccc
Confidence 5999999999987642 12222 246899999999987432 4444443332 125899999999853
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.013 Score=52.05 Aligned_cols=61 Identities=13% Similarity=0.150 Sum_probs=41.8
Q ss_pred EEEEEccCCCCCcc--c----c--ccCCCCcEEEEcCCCCCCCC-HHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPH--I----R--FNIPDGDIFIHAGDFTRCGG-EEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~--l----~--~~~~~~D~viiaGDl~~~g~-~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
||++++|+=+.... + . .+..++|++|..||....+. .. ....+.|..+.. - .+..|||++.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~L~~~G~-D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKELLSAGV-D-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHHHHhcCC-C-EEEecccccC
Confidence 68999999775432 1 1 12347899999999987552 22 356778887764 3 5666999974
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0011 Score=60.52 Aligned_cols=63 Identities=22% Similarity=0.212 Sum_probs=43.5
Q ss_pred EEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~ 107 (295)
.+.+++|+|+....+. ......+.+++.||++++|.... +.+..|..++ ...++++.||||..
T Consensus 44 ~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 44 PVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV--ETMEYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH--HHHHHHHHhhhcCCCcEEEEecccchH
Confidence 3899999999877642 12245678999999999997432 3444443332 12589999999974
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00092 Score=60.68 Aligned_cols=62 Identities=23% Similarity=0.268 Sum_probs=42.1
Q ss_pred EEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhc--C-CCCcEEEEcCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGN--L-PHKHKLVIAGNHELS 107 (295)
Q Consensus 44 I~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~--l-~~~pv~~V~GNHD~~ 107 (295)
+.+++|+|+....+. ...+..+-+++.||++++|.... +.+..+-. + ....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSV--ETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHH--HHHHHHHHHhhccCCeEEEEecccchH
Confidence 789999999887652 13345567889999999987432 33333322 1 112589999999975
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0014 Score=60.09 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=43.9
Q ss_pred ceEEEEEccCCCCCcccc-----ccC-CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHIR-----FNI-PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELS 107 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l~-----~~~-~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~ 107 (295)
..++.+++|+|+....+. ... ..-|.+++.||++|+|...- +.+..|..++ ...++.+.||||..
T Consensus 59 ~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~--Evl~ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 59 GEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSV--EVILTLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred CceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChH--HHHHHHHHhhhccCCceEEEeeccchH
Confidence 357999999999876542 111 23468999999999997432 3444443321 12589999999974
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=59.00 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=41.0
Q ss_pred EEEEEccCCCCCcccc-----ccCC----CC----cEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FNIP----DG----DIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHEL 106 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~~~----~~----D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~ 106 (295)
.+.+++|+|++...+. ...+ .. .-+++.||++|+|.... +.+..|..+. ...++.+.||||.
T Consensus 49 ~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~--evl~ll~~lk~~~p~~v~lLRGNHE~ 126 (311)
T cd07419 49 PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSL--ETICLLLALKVKYPNQIHLIRGNHED 126 (311)
T ss_pred CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChH--HHHHHHHHhhhcCCCcEEEeccccch
Confidence 3888999999876541 1111 11 24789999999987432 4444443332 1258999999997
Q ss_pred C
Q psy12823 107 S 107 (295)
Q Consensus 107 ~ 107 (295)
.
T Consensus 127 ~ 127 (311)
T cd07419 127 R 127 (311)
T ss_pred H
Confidence 4
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.059 Score=48.19 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=42.3
Q ss_pred eEEEEEccCCCCCcc--c-----c-ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPH--I-----R-FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~--l-----~-~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|||++++|+=+.... + + .+..++|++|..||.+..|. ..-.+..+.|.+... -++ ..|||.+.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~-Gi~~~~~~~L~~~Gv-Dvi-T~GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGK-GLTLKIYEFLKQSGV-NYI-TMGNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCC-CCCHHHHHHHHhcCC-CEE-Eccchhcc
Confidence 899999999776422 1 1 13347999999999986542 111356677777764 444 44999984
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0049 Score=52.90 Aligned_cols=65 Identities=12% Similarity=0.249 Sum_probs=38.7
Q ss_pred EEEEccCCCCCccc----------ccc-CCCCcEEEEcCCCCCCCCHH---------------HHHHHHHHHhcCC-CCc
Q psy12823 44 VVCMSDTHSLTPHI----------RFN-IPDGDIFIHAGDFTRCGGEE---------------EVTEFNTWIGNLP-HKH 96 (295)
Q Consensus 44 I~~iSDlH~~~~~l----------~~~-~~~~D~viiaGDl~~~g~~~---------------e~~~~~~~L~~l~-~~p 96 (295)
|+++||+|.+...+ ... ..+++++|++|++++..... ....+.+.+.++. ..+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 78999999985431 134 67899999999999852211 1122334445543 347
Q ss_pred EEEEcCCCCCCC
Q psy12823 97 KLVIAGNHELSF 108 (295)
Q Consensus 97 v~~V~GNHD~~~ 108 (295)
|++|||++|...
T Consensus 81 vvlvPg~~D~~~ 92 (209)
T PF04042_consen 81 VVLVPGPNDPTS 92 (209)
T ss_dssp EEEE--TTCTT-
T ss_pred EEEeCCCccccc
Confidence 999999999864
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.45 E-value=2.5 Score=36.89 Aligned_cols=56 Identities=14% Similarity=-0.022 Sum_probs=34.8
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEE
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFI 266 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~v 266 (295)
+..|+++|-..-. +... .....++.+.+. ...+|+++.||.|..+..+..++++++
T Consensus 176 D~vIv~~H~G~e~--~~~p---~~~~~~la~~l~-~~G~D~IiG~H~Hv~q~~E~~~~~~I~ 231 (239)
T cd07381 176 DIVIVSLHWGVEY--SYYP---TPEQRELARALI-DAGADLVIGHHPHVLQGIEIYKGKLIF 231 (239)
T ss_pred CEEEEEecCcccC--CCCC---CHHHHHHHHHHH-HCCCCEEEcCCCCcCCCeEEECCEEEE
Confidence 4567778876421 1110 011134444442 457999999999999888777776655
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG0373|consensus | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.16 Score=43.66 Aligned_cols=71 Identities=32% Similarity=0.444 Sum_probs=44.4
Q ss_pred eecCCCCCCCCCCceEEEEEccCCCCCccc----cc--cCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhcCCCCcEEE
Q psy12823 28 INVQPPKTQVDPKKVRVVCMSDTHSLTPHI----RF--NIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGNLPHKHKLV 99 (295)
Q Consensus 28 ~~~~~~~~~~~~~~mrI~~iSDlH~~~~~l----~~--~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~l~~~pv~~ 99 (295)
-|+||-.+| +-+.+|+|+....+ +. ..++.. -|+.||++++|.. +.+..++-...+.+. .+-.
T Consensus 39 sNvqPV~tP-------VTvCGDIHGQFyDL~eLFrtgG~vP~tn-YiFmGDfVDRGyySLEtfT~l~~LkaryP~-~ITL 109 (306)
T KOG0373|consen 39 SNVQPVSTP-------VTVCGDIHGQFYDLLELFRTGGQVPDTN-YIFMGDFVDRGYYSLETFTLLLLLKARYPA-KITL 109 (306)
T ss_pred cCccccCCC-------eeEeeccchhHHHHHHHHHhcCCCCCcc-eEEeccccccccccHHHHHHHHHHhhcCCc-eeEE
Confidence 455655554 56899999987664 11 223333 5678999999863 333333333333443 5889
Q ss_pred EcCCCCCC
Q psy12823 100 IAGNHELS 107 (295)
Q Consensus 100 V~GNHD~~ 107 (295)
+.|||+..
T Consensus 110 lRGNHEsR 117 (306)
T KOG0373|consen 110 LRGNHESR 117 (306)
T ss_pred eeccchhh
Confidence 99999974
|
|
| >KOG0371|consensus | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.11 Score=45.82 Aligned_cols=63 Identities=21% Similarity=0.275 Sum_probs=42.4
Q ss_pred EEEEEccCCCCCccc----cccCCCCcE-EEEcCCCCCCCCHHHHHHHHHHHhcCC--C-CcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHI----RFNIPDGDI-FIHAGDFTRCGGEEEVTEFNTWIGNLP--H-KHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l----~~~~~~~D~-viiaGDl~~~g~~~e~~~~~~~L~~l~--~-~pv~~V~GNHD~~ 107 (295)
-+.+++|+|+....+ ++.-..+|. .++.||.+++|.... +....|-.++ . ..|.++.||||..
T Consensus 61 pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~Sv--etVS~lva~Kvry~~rvtilrGNHEsr 131 (319)
T KOG0371|consen 61 PVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSV--ETVSLLVALKVRYPDRVTILRGNHESR 131 (319)
T ss_pred ceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchH--HHHHHHHHhhccccceeEEecCchHHH
Confidence 478999999987654 222233443 677899999987543 4445554443 1 1589999999974
|
|
| >KOG0372|consensus | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.3 Score=42.79 Aligned_cols=64 Identities=20% Similarity=0.173 Sum_probs=39.8
Q ss_pred EEEEccCCCCCccc----cc-cCCCCcEEEEcCCCCCCCCHH-HHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 44 VVCMSDTHSLTPHI----RF-NIPDGDIFIHAGDFTRCGGEE-EVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 44 I~~iSDlH~~~~~l----~~-~~~~~D~viiaGDl~~~g~~~-e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
+.+++|+|+....+ +. ....-.--++.||++|+|-.. |.--++-.|+-.-...+..+.|||+..
T Consensus 45 vtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 67899999987654 11 112334467899999988532 211223333432223589999999975
|
|
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.64 Score=41.93 Aligned_cols=71 Identities=18% Similarity=0.126 Sum_probs=46.2
Q ss_pred CCCceEEEEEccCCCCCcc----cc-----c-c----CCCCcEEEEcCCCCCCC------CHHHHHHHHHHHhc-----C
Q psy12823 38 DPKKVRVVCMSDTHSLTPH----IR-----F-N----IPDGDIFIHAGDFTRCG------GEEEVTEFNTWIGN-----L 92 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~----l~-----~-~----~~~~D~viiaGDl~~~g------~~~e~~~~~~~L~~-----l 92 (295)
+....+++++||+|++... |+ . + ...|-++|++|+++... ....|++.++.|.. .
T Consensus 24 ~~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~f 103 (291)
T PTZ00235 24 NDKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKF 103 (291)
T ss_pred CCCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhC
Confidence 5667899999999998764 21 1 1 12488999999998752 12234444444332 1
Q ss_pred C----CCcEEEEcCCCCCCC
Q psy12823 93 P----HKHKLVIAGNHELSF 108 (295)
Q Consensus 93 ~----~~pv~~V~GNHD~~~ 108 (295)
+ ....++|||-.|.|.
T Consensus 104 p~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 104 KLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred hHHHhcCeEEEECCCCCCCc
Confidence 1 125899999999863
|
|
| >KOG0374|consensus | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.19 Score=46.37 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=41.2
Q ss_pred EEEEEccCCCCCccc-c---c-c-CCCCcEEEEcCCCCCCCCHHH-HHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHI-R---F-N-IPDGDIFIHAGDFTRCGGEEE-VTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l-~---~-~-~~~~D~viiaGDl~~~g~~~e-~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
-|.+++|+|+....+ + . . .+.-.-.++.||.+|+|...- ....+-.++..-...++.+.|||+..
T Consensus 60 PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~ 131 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECA 131 (331)
T ss_pred CEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccc
Confidence 488999999988764 1 1 2 333455888999999987421 11112222222112699999999986
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=87.38 E-value=9.1 Score=33.65 Aligned_cols=56 Identities=11% Similarity=-0.120 Sum_probs=35.7
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEE
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFI 266 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~v 266 (295)
+..|++.|...-. .... .....++...+. ...+|+++.+|.|....++..++++++
T Consensus 185 D~vIv~~HwG~e~--~~~p---~~~q~~~a~~li-daGaDiIiG~HpHv~q~~E~y~~~~I~ 240 (250)
T PF09587_consen 185 DVVIVSLHWGIEY--ENYP---TPEQRELARALI-DAGADIIIGHHPHVIQPVEIYKGKPIF 240 (250)
T ss_pred CEEEEEeccCCCC--CCCC---CHHHHHHHHHHH-HcCCCEEEeCCCCcccceEEECCEEEE
Confidence 4567778876321 1110 112234555554 467999999999999998877766655
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG0375|consensus | Back alignment and domain information |
|---|
Probab=86.49 E-value=0.82 Score=42.23 Aligned_cols=64 Identities=20% Similarity=0.266 Sum_probs=40.5
Q ss_pred EEEEccCCCCCcccc--cc---CCCCcEEEEcCCCCCCCCHH-HHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR--FN---IPDGDIFIHAGDFTRCGGEE-EVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 44 I~~iSDlH~~~~~l~--~~---~~~~D~viiaGDl~~~g~~~-e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|-+.+|+|+....|. +. .+.----++.||.+|+|... |..-++..|+-.-.+..+.+.|||+..
T Consensus 90 iTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECr 159 (517)
T KOG0375|consen 90 ITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECR 159 (517)
T ss_pred eeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchh
Confidence 789999999876541 21 12233467789999998753 222233344432223478999999985
|
|
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=83.17 E-value=0.78 Score=45.40 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=34.6
Q ss_pred CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 62 PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 62 ~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
.-+|.+-+.||++|+|.... .+++.|.... -|=+-+||||.-
T Consensus 183 L~VDhLHIvGDIyDRGp~pd--~ImD~Lm~~h--svDIQWGNHDIl 224 (640)
T PF06874_consen 183 LAVDHLHIVGDIYDRGPRPD--KIMDRLMNYH--SVDIQWGNHDIL 224 (640)
T ss_pred HhhhheeecccccCCCCChh--HHHHHHhcCC--CccccccchHHH
Confidence 46899999999999998766 6778887753 477899999983
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 295 | ||||
| 3rl4_A | 296 | Rat Metallophosphodiesterase Mpped2 G252h Mutant Le | 2e-65 | ||
| 3rl3_A | 296 | Rat Metallophosphodiesterase Mpped2 Length = 296 | 2e-64 | ||
| 3rl5_A | 296 | Rat Metallophosphodiesterase Mpped2 H67r Mutant Len | 1e-63 |
| >pdb|3RL4|A Chain A, Rat Metallophosphodiesterase Mpped2 G252h Mutant Length = 296 | Back alignment and structure |
|
| >pdb|3RL3|A Chain A, Rat Metallophosphodiesterase Mpped2 Length = 296 | Back alignment and structure |
|
| >pdb|3RL5|A Chain A, Rat Metallophosphodiesterase Mpped2 H67r Mutant Length = 296 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 295 | |||
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 8e-78 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 7e-20 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 3e-04 |
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* Length = 296 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 8e-78
Identities = 125/298 (41%), Positives = 166/298 (55%), Gaps = 22/298 (7%)
Query: 1 MSIPIHPLTQNPTAAWKELSGSQKVIKINVQ------PPKTQVDPKKVRVVCMSDTHSLT 54
++I + + NPT A+ + +Q + P T R VC+SDT S
Sbjct: 13 VTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTRSR- 71
Query: 55 PHIRFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTH 114
+P GDI +H GDFT G EV +FN W+GNLP+++K+VIAGNHEL+FD F
Sbjct: 72 -TDGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMA 130
Query: 115 PLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFY 174
L P S + N++ LTN YLQD E + G + Y
Sbjct: 131 DLVKQDYYRF-------------PSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIY 177
Query: 175 GTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLR-AGCVEL 233
G PW P F W FN+PRG++ L KW IP TD+L++H PP+G D L+ GCVEL
Sbjct: 178 GAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVEL 237
Query: 234 LTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPG 291
L TVQ+RV+PK HVFG +HEGYG +DG +INASTC +++ PTNPPI+FD+ P G
Sbjct: 238 LNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTNPPIIFDLPNPQG 295
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 86.0 bits (212), Expect = 7e-20
Identities = 35/244 (14%), Positives = 71/244 (29%), Gaps = 32/244 (13%)
Query: 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHK 97
+V+ + + + DI + G+ + E+ E P++
Sbjct: 7 KVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKV 66
Query: 98 LVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLP-------RDSLTEAVKARN 150
+ ++ + F + + T +P + L A +A
Sbjct: 67 IHENEHYIIETLDKFFREIGEL-----------GVKTFVVPGKNDAPLKIFLRAAYEAET 115
Query: 151 MRDRLTNCTYLQDEERILYGIKFYGTPWQP----EFCKWAFNVPRGEACLSKWQDIPADT 206
+ R + + +G E + E L ++
Sbjct: 116 AYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRR 175
Query: 207 DVLISHTPPIGHG--DLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRII 264
V I +TPPIG G + T + + + P+ + GHV + G G I
Sbjct: 176 LVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTII-KSLNPEVAIVGHVGK--GHELVGNTI 232
Query: 265 FINA 268
+N
Sbjct: 233 VVNP 236
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 3e-04
Identities = 22/232 (9%), Positives = 52/232 (22%), Gaps = 42/232 (18%)
Query: 43 RVVCMSDTHSLTPHI-----RFNIPDGDIFIHAGDFTRCGG-EEEVTEFNTWIGNLPHKH 96
++ S+ + D G+ + F +
Sbjct: 7 YILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLP- 65
Query: 97 KLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLT 156
+ G + P R++ + MR+
Sbjct: 66 TAYVPGPQD--------------------------APIWEYLREAANVELVHPEMRNVHE 99
Query: 157 NCTYLQDEERIL-YGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPP 215
T+ + + G + E + E L ++ + + HT P
Sbjct: 100 TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMP 159
Query: 216 IGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFIN 267
G G E+ + + P + + + + G +
Sbjct: 160 YHKGL-----NEQGSHEVAHLI-KTHNPLLVLVAGKGQKHEML--GASWVVV 203
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 295 | |||
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 100.0 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.92 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.92 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.87 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.85 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.77 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.76 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.75 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.75 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.73 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.73 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.72 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.7 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.68 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.66 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.66 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.65 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.65 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.63 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.62 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.6 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.6 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.59 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.58 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.57 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.55 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.54 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.42 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.32 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 99.09 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.9 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.85 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.78 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.76 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 98.62 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 98.59 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 98.59 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.44 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.41 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.38 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 98.34 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 98.18 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 98.15 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 98.12 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.12 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 98.1 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.08 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 98.0 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.92 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.83 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 97.8 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.73 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.7 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 96.78 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 96.54 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 95.62 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 94.47 |
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-48 Score=345.31 Aligned_cols=276 Identities=46% Similarity=0.837 Sum_probs=221.4
Q ss_pred CcccCCCCCCChhHHHHhhcccee------eeeeecCCCCCCCCCCceEEEEEccCCCCCccccccCCCCcEEEEcCCCC
Q psy12823 1 MSIPIHPLTQNPTAAWKELSGSQK------VIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHIRFNIPDGDIFIHAGDFT 74 (295)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~mrI~~iSDlH~~~~~l~~~~~~~D~viiaGDl~ 74 (295)
|.|.+|||+++||++|+.++.+|+ +++.....++.|+....|||+++||+|.....+ ...++|+||+|||++
T Consensus 13 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~mri~~iSD~H~~~~~l--~i~~~D~vi~aGDl~ 90 (296)
T 3rl5_A 13 VTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTRSRTDGI--QMPYGDILLHTGDFT 90 (296)
T ss_dssp CCCCCCTTTTCHHHHHHHHHHHHCTTCTTTSEECCCCCTTSCCCTTEEEEEEEBCCTTCCTTC--CCCSCSEEEECSCCS
T ss_pred eeEecccccCChHHHHHHHhhccccccCCceeecccCCCCCCCCCCCeEEEEEeeCCCCcchh--ccCCCCEEEECCccc
Confidence 568999999999999999999988 878888889999999999999999999987655 457899999999999
Q ss_pred CCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhc
Q psy12823 75 RCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDR 154 (295)
Q Consensus 75 ~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 154 (295)
+.|..++++.++++|++++.+++++|+||||.+++..+.+.+. .+.+. ..+++..... -..+++..+
T Consensus 91 ~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~~d~~~~~~~~---~~~~~-----~~~~~~~~~~-----~~~~~~~~l 157 (296)
T 3rl5_A 91 ELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLV---KQDYY-----RFPSVSKLKP-----EDFDNVQSL 157 (296)
T ss_dssp SSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGGGCHHHHHHHT---TSCGG-----GSHHHHTCCH-----HHHTTTGGG
T ss_pred CCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccccchhhhhhhh---ccccc-----cccccccccc-----chhhhHhhh
Confidence 9999999999999999987657999999999976543211100 00000 0000000000 011234445
Q ss_pred cCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCC-cCCCccCcHHH
Q psy12823 155 LTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLC-CTGLRAGCVEL 233 (295)
Q Consensus 155 ~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~-~~~~~~g~~~l 233 (295)
..++.+|++++++++|++|+|++++|.++.|+|++.+.+++.+.|..++++.+|++||.||.+..|.. ..+.+.|+.+|
T Consensus 158 ~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L 237 (296)
T 3rl5_A 158 LTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVEL 237 (296)
T ss_dssp CTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCTTCSEEEESSCBTTSSCEEGGGTEECSBHHH
T ss_pred cCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCCCCeEEEECCCccccccccccccCcCChHHH
Confidence 67899999999999999999999999888899998877766667777888899999999999987764 24567999999
Q ss_pred HHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCCCCCCCEEEEecCCCC
Q psy12823 234 LTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIVFDIALPPG 291 (295)
Q Consensus 234 ~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~~~~~~~~~~~~~~~~ 291 (295)
++.+.++.++++++|||+|.++.....|+++++|||+++.++++.|+|++|++.+|+|
T Consensus 238 ~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~~~~n~p~v~dl~~~~~ 295 (296)
T 3rl5_A 238 LNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTNPPIIFDLPNPQG 295 (296)
T ss_dssp HHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTSCCCSCCEEEEEECC--
T ss_pred HHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCcCCCCCCEEEEecCCCC
Confidence 9988447899999999999998777789999999999999999999999999999987
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=190.93 Aligned_cols=195 Identities=18% Similarity=0.185 Sum_probs=125.6
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCH---------------------------HHHHHHHH
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGE---------------------------EEVTEFNT 87 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~---------------------------~e~~~~~~ 87 (295)
++|||+++||+|++...+. .+..++|+||++||+++.+.. +.+.++++
T Consensus 4 ~~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 83 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 83 (260)
T ss_dssp CCCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHH
Confidence 4799999999999876542 123589999999999997754 23455666
Q ss_pred HHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCc-E
Q psy12823 88 WIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEE-R 166 (295)
Q Consensus 88 ~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~-~ 166 (295)
.|++++ .|+++|+||||.+... .+++.. +.. ..+.++.++++.. +
T Consensus 84 ~l~~~~-~pv~~v~GNHD~~~~~------------------------------~~~~~~--~~~-~~~~~~~~l~~~~~~ 129 (260)
T 2yvt_A 84 EIGELG-VKTFVVPGKNDAPLKI------------------------------FLRAAY--EAE-TAYPNIRVLHEGFAG 129 (260)
T ss_dssp HHHTTC-SEEEEECCTTSCCHHH------------------------------HHHHHH--HTT-TTCTTEEECSSEEEE
T ss_pred HHHhcC-CcEEEEcCCCCchhhh------------------------------hHHHHh--hhc-cCCcceEEecCcceE
Confidence 666654 4899999999974100 000000 000 0123567777766 7
Q ss_pred EEcceEEEeecCCCCCCCCCcccCchh--------hhhhhccCCCCCccEEEecCCCCCC-CCCC-cCCCccCcHHHHHH
Q psy12823 167 ILYGIKFYGTPWQPEFCKWAFNVPRGE--------ACLSKWQDIPADTDVLISHTPPIGH-GDLC-CTGLRAGCVELLTT 236 (295)
Q Consensus 167 ~i~gv~i~G~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~IlvtH~pp~~~-~D~~-~~~~~~g~~~l~~~ 236 (295)
++++++|+|.+++.... .+...+.. ..++.+.+.++..+|+++|+||.+. .|.. ....+.|+..+.+.
T Consensus 130 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~ 207 (260)
T 2yvt_A 130 WRGEFEVIGFGGLLTEH--EFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTI 207 (260)
T ss_dssp ETTTEEEEEECSEEESS--CCBSSSSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHH
T ss_pred EECCEEEEecCCCcCCC--CcCHHHHhhcchhhHHHHHHHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHH
Confidence 88899999987532100 11111111 1113333344467899999999754 3332 12345788888888
Q ss_pred HHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 237 VQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 237 l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
+ ++.++++++|||+| ......+++.++|+|+...
T Consensus 208 ~-~~~~~~~vl~GH~H--~~~~~~~~~~~in~Gs~~~ 241 (260)
T 2yvt_A 208 I-KSLNPEVAIVGHVG--KGHELVGNTIVVNPGEFEE 241 (260)
T ss_dssp H-HHHCCSEEEECSSC--CEEEEETTEEEEECCBGGG
T ss_pred H-HHhCCCEEEECCcc--CCcEEeCCEEEEeCCCCCC
Confidence 7 57899999999999 3345568889999999864
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=184.07 Aligned_cols=190 Identities=10% Similarity=0.032 Sum_probs=126.7
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCC-CHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCG-GEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFT 113 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g-~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~ 113 (295)
++|||+++||+|++...+. .+..++|+||++||+++.+ ..+++.++++.|++++ .|+++|+||||.+..
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~-~pv~~v~GNHD~~~~---- 78 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH-LPTAYVPGPQDAPIW---- 78 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGC-SCEEEECCTTSCSHH----
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CcEEEECCCCCchhH----
Confidence 4699999999999865431 1223899999999999988 6677778888888875 489999999996410
Q ss_pred CCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEc-ceEEEeecCCCCCCCCCcccCch
Q psy12823 114 HPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILY-GIKFYGTPWQPEFCKWAFNVPRG 192 (295)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~-gv~i~G~~~~~~~~~~~~~~~~~ 192 (295)
+.+++.. .......+...+.+..+.++ +++|+|.+++.. ..+.+...+.
T Consensus 79 --------------------------~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~-~~~~~~~~~~ 128 (228)
T 1uf3_A 79 --------------------------EYLREAA---NVELVHPEMRNVHETFTFWRGPYLVAGVGGEIA-DEGEPEEHEA 128 (228)
T ss_dssp --------------------------HHHHHHH---HHHHHCTTEEECBTSEEEETTTEEEEEECSEEE-SSSCCBSSSS
T ss_pred --------------------------HHHHhhh---hhhccCcceEEcccceEeeCCCcEEecCCCCcC-CCCccChhhc
Confidence 0111000 00111345677878788887 899999864210 0111111111
Q ss_pred --------hhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEE
Q psy12823 193 --------EACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRII 264 (295)
Q Consensus 193 --------~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~ 264 (295)
+...+.+.+.+++.+|+++|+||... + ....|+..+.+.+ ++.++++++|||+| . .....+++.
T Consensus 129 ~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~~~~-~----~~~~~~~~~~~~~-~~~~~~~~~~GH~H-~-~~~~~~~~~ 200 (228)
T 1uf3_A 129 LRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHK-G----LNEQGSHEVAHLI-KTHNPLLVLVAGKG-Q-KHEMLGASW 200 (228)
T ss_dssp CEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBT-T----TBTTSBHHHHHHH-HHHCCSEEEECCSS-C-EEEEETTEE
T ss_pred ccchhhhHHHHHHHHHhCCCCCeEEEEccCcccC-C----ccccCHHHHHHHH-HHhCCCEEEEcccc-c-CccccCCce
Confidence 00112333444568999999999754 1 2346777888877 47799999999999 3 335568889
Q ss_pred EEeCCcCC
Q psy12823 265 FINASTCD 272 (295)
Q Consensus 265 ~vn~g~~~ 272 (295)
++|+|+..
T Consensus 201 ~in~Gs~~ 208 (228)
T 1uf3_A 201 VVVPGDLS 208 (228)
T ss_dssp EEECCBGG
T ss_pred EEEecccC
Confidence 99999875
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=175.52 Aligned_cols=196 Identities=17% Similarity=0.105 Sum_probs=121.1
Q ss_pred eEEEEEccCCCCCc------------ccc-----ccC--CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 42 VRVVCMSDTHSLTP------------HIR-----FNI--PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 42 mrI~~iSDlH~~~~------------~l~-----~~~--~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
|||+++||+|+... .+. .+. .++|+||++||+++.+..++++.+.+.|+++. .|+++|+|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~-~p~~~v~G 79 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLN-YPLYLIPG 79 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCS-SCEEEECC
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcC-CCEEEECC
Confidence 89999999999852 121 122 47899999999999888888888999999886 48999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCC
Q psy12823 103 NHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEF 182 (295)
Q Consensus 103 NHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~ 182 (295)
|||.+.. + .+.+. ..|.....+... ...+++.++++|+|++.....
T Consensus 80 NHD~~~~--~--------------------------~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 80 NHDDKAL--F--------------------------LEYLQ-----PLCPQLGSDANN-MRCAVDDFATRLLFIDSSRAG 125 (274)
T ss_dssp TTSCHHH--H--------------------------HHHHG-----GGSGGGCSCGGG-CCEEECSSSSEEEECCCCCTT
T ss_pred CCCCHHH--H--------------------------HHHhh-----hhhcCcccCCCc-eEEEEEeCCEEEEEEeCCCCC
Confidence 9997410 0 00000 001000000000 011234467899997743211
Q ss_pred C-CCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCC-CcCCCccCcHHHHHHHHhhC-CCcEEEeccccCCCCeee
Q psy12823 183 C-KWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDL-CCTGLRAGCVELLTTVQQRV-KPKYHVFGHVHEGYGITS 259 (295)
Q Consensus 183 ~-~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~-~~~~~~~g~~~l~~~l~~~~-~~~~~l~GH~H~~~~~~~ 259 (295)
. .......+.+++.+.+.+.+++..|+++|+||...... .......+..++.+.+ +++ ++++++|||+|.......
T Consensus 126 ~~~~~~~~~~~~wl~~~l~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~v~~vl~GH~H~~~~~~~ 204 (274)
T 3d03_A 126 TSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALV-ERFPSLTRIFCGHNHSLTMTQY 204 (274)
T ss_dssp CSSBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHH-HHCTTEEEEEECSSSSCEEEEE
T ss_pred CCCCeeCHHHHHHHHHHHHhCCCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHH-HhCCCceEEEeCCCCCchhheE
Confidence 0 01111222333434333334568899999999754211 0011124556788887 466 899999999999886555
Q ss_pred cCcEEEEeCCcCCC
Q psy12823 260 DGRIIFINASTCDL 273 (295)
Q Consensus 260 ~g~~~~vn~g~~~~ 273 (295)
.|.++++|+|++..
T Consensus 205 ~g~~~~~~pg~~~~ 218 (274)
T 3d03_A 205 RQALISTLPGTVHQ 218 (274)
T ss_dssp TTEEEEECCCSSCB
T ss_pred CCEEEEEcCCccee
Confidence 66678999999864
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=171.59 Aligned_cols=194 Identities=16% Similarity=0.121 Sum_probs=120.8
Q ss_pred CCCceEEEEEccCCCCCcc------------c----c-cc--CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcC----CC
Q psy12823 38 DPKKVRVVCMSDTHSLTPH------------I----R-FN--IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNL----PH 94 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~------------l----~-~~--~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l----~~ 94 (295)
....|||+++||+|+.... + . .+ ..++|+||++||+++.+..+++..+.++++.+ .
T Consensus 22 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~- 100 (330)
T 3ib7_A 22 PRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLG- 100 (330)
T ss_dssp CCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHT-
T ss_pred CCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcC-
Confidence 4568999999999985321 1 1 12 26899999999999999888877777777643 3
Q ss_pred CcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEE
Q psy12823 95 KHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFY 174 (295)
Q Consensus 95 ~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~ 174 (295)
.|+++|+||||... .+ . ..+.. ...........+++++++|+
T Consensus 101 ~pv~~v~GNHD~~~--~~------------------------------~-----~~~~~-~~~~~~~~~~~~~~~~~~~i 142 (330)
T 3ib7_A 101 AELVWVMGNHDDRA--EL------------------------------R-----KFLLD-EAPSMAPLDRVCMIDGLRII 142 (330)
T ss_dssp CEEEECCCTTSCHH--HH------------------------------H-----HHHHC-CCCCCSCCCEEEEETTEEEE
T ss_pred CCEEEeCCCCCCHH--HH------------------------------H-----HHhcc-cccccCCcceEEEeCCEEEE
Confidence 48999999999631 00 0 00000 00000011234667888998
Q ss_pred eecCCCCC-CCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCC-CCCcCCCccCcHHHHHHHHhhCCCcEEEecccc
Q psy12823 175 GTPWQPEF-CKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHG-DLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVH 252 (295)
Q Consensus 175 G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~-D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H 252 (295)
+....... ........+.+++.+.+...++...|+++||+|.... +........+...+.+.+ ++.++++++|||+|
T Consensus 143 ~lds~~~~~~~~~~~~~q~~wl~~~l~~~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l-~~~~v~~v~~GH~H 221 (330)
T 3ib7_A 143 VLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVL-RGTDVRAILAGHLH 221 (330)
T ss_dssp ECCCCCTTCCSBCCCHHHHHHHHHHTTSCCTTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHH-TTSSEEEEEECSSS
T ss_pred EecCCCCCCCCCccCHHHHHHHHHHHHhcccCCeEEEEECCCCCCCccccccccccCHHHHHHHH-hccCceEEEECCCC
Confidence 87633210 0111222334455555555555668999999998542 111111234556788877 57899999999999
Q ss_pred CCCCeeecCcEEEEeCCcCC
Q psy12823 253 EGYGITSDGRIIFINASTCD 272 (295)
Q Consensus 253 ~~~~~~~~g~~~~vn~g~~~ 272 (295)
...... .+++.++|+|+..
T Consensus 222 ~~~~~~-~~g~~~~~~gs~~ 240 (330)
T 3ib7_A 222 YSTNAT-FVGIPVSVASATC 240 (330)
T ss_dssp SCEEEE-ETTEEEEECCCSS
T ss_pred Ccccce-ECCEEEEecCcce
Confidence 988544 4555666666554
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=159.17 Aligned_cols=184 Identities=17% Similarity=0.142 Sum_probs=106.7
Q ss_pred CCCCCCceEEEEEccCCCCCc--c-----------c-----cccCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhcCC-
Q psy12823 35 TQVDPKKVRVVCMSDTHSLTP--H-----------I-----RFNIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGNLP- 93 (295)
Q Consensus 35 ~~~~~~~mrI~~iSDlH~~~~--~-----------l-----~~~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~l~- 93 (295)
.|+...+|||+++||+|++.. . + .....++|+||+|||+++.+.+ .++..+.++|+++.
T Consensus 14 ~~~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 14 LVPRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp ----CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 356678899999999999852 1 1 1235689999999999987743 34445666666551
Q ss_pred -CCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEE---c
Q psy12823 94 -HKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERIL---Y 169 (295)
Q Consensus 94 -~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i---~ 169 (295)
..||++|+||||......... . .+.+ ...+.++.++.+.+ .
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~~----------~-------------~~~l------------~~~v~~l~~~~v~~~~~~ 138 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEES----------P-------------LALL------------KDYVKILDGKDVINVNGE 138 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSCC----------G-------------GGGG------------TTTCEECSEEEEEEETTE
T ss_pred cCCcEEEEcCCCCCCccccccC----------H-------------HHHH------------HHHeEEcCCCcEEEeCCC
Confidence 249999999999753111000 0 0000 01134444433433 4
Q ss_pred ceEEEeecCCCCCCCCCcccCchhhhhhhccCC-----CCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCc
Q psy12823 170 GIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDI-----PADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPK 244 (295)
Q Consensus 170 gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~ 244 (295)
++.|+|.++.... . .+.+.+.+..+ .+.+.|+++|+|+.+..+.. .... + ..+ .+++
T Consensus 139 ~v~i~gl~~~~~~---~-----~~~~~~~l~~l~~~~~~~~~~Ill~H~~~~~~~~~~---~~~~---~-~~l---~~~d 200 (386)
T 3av0_A 139 EIFICGTYYHKKS---K-----REEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLD---YELE---H-FDL---PKFS 200 (386)
T ss_dssp EEEEEEECCCCST---T-----HHHHHHHHHHHHHHHHTCSSEEEEECCCCTTTSSSS---CSSC---G-GGS---CCCS
T ss_pred CEEEEeCCCCCHH---H-----HHHHHHHHHHhhhhcccCCCEEEEECcCccccCCCC---cccC---H-HHh---hhCC
Confidence 6889999865311 0 11111111111 24688999999986532210 0011 1 111 2389
Q ss_pred EEEeccccCCCCeeecCcEEEEeCCcCC
Q psy12823 245 YHVFGHVHEGYGITSDGRIIFINASTCD 272 (295)
Q Consensus 245 ~~l~GH~H~~~~~~~~g~~~~vn~g~~~ 272 (295)
++++||+|.+. ....+++.++|||+..
T Consensus 201 ~v~~GH~H~~~-~~~~~~~~i~ypGS~~ 227 (386)
T 3av0_A 201 YYALGHIHKRI-LERFNDGILAYSGSTE 227 (386)
T ss_dssp EEEECSCCSCE-EEECSSSEEEECCCSS
T ss_pred eEEccCCCCCc-cccCCCceEEECCccc
Confidence 99999999874 3444677899999874
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=144.02 Aligned_cols=163 Identities=23% Similarity=0.248 Sum_probs=96.3
Q ss_pred CCCCCCCCCCc-eEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCC
Q psy12823 31 QPPKTQVDPKK-VRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNH 104 (295)
Q Consensus 31 ~~~~~~~~~~~-mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNH 104 (295)
..+..|++... |||+++||+|.+...+. .+..++|+|+++||+++. ++++.|+++. .|+++|+|||
T Consensus 14 ~~~~~~~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------~~~~~l~~l~-~~~~~V~GNh 85 (190)
T 1s3l_A 14 IPTTENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------FVIKEFENLN-ANIIATYGNN 85 (190)
T ss_dssp ------------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------HHHHHGGGCS-SEEEEECCTT
T ss_pred CCcccChhhcCCeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------HHHHHHHhcC-CCEEEEeCCC
Confidence 45667777776 99999999997655431 223689999999999863 3567777764 4899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCC
Q psy12823 105 ELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCK 184 (295)
Q Consensus 105 D~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~ 184 (295)
|.+.. .+.+++.... +.. +...+
T Consensus 86 D~~~~-------------------------------~~~~~~~~~~----~~~---------------l~~~~------- 108 (190)
T 1s3l_A 86 DGERC-------------------------------KLKEWLKDIN----EEN---------------IIDDF------- 108 (190)
T ss_dssp CCCHH-------------------------------HHHHHHHHHC----TTC---------------EEESE-------
T ss_pred cchHH-------------------------------HHHHHhcccC----hhh---------------hcccc-------
Confidence 96410 0100000000 000 00000
Q ss_pred CCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEE
Q psy12823 185 WAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRII 264 (295)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~ 264 (295)
..+ + .++.+|+++|++|.+ +.+.+.+..++++++|||+|.+.. ...++++
T Consensus 109 ------------~~~-~-~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~-~~~~~~~ 158 (190)
T 1s3l_A 109 ------------ISV-E-IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVF-EEVDDVL 158 (190)
T ss_dssp ------------EEE-E-ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEE-EEETTEE
T ss_pred ------------eEE-e-eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcce-EEECCEE
Confidence 000 0 135789999999742 333442223899999999999875 4568899
Q ss_pred EEeCCcCCCCCCCCCCCEEEEecCCC
Q psy12823 265 FINASTCDLNYLPTNPPIVFDIALPP 290 (295)
Q Consensus 265 ~vn~g~~~~~~~~~~~~~~~~~~~~~ 290 (295)
++|||+++. |...++....+++..
T Consensus 159 ~iNpGs~~~--r~~~~~~y~il~~~~ 182 (190)
T 1s3l_A 159 VINPGECCG--YLTGIPTIGILDTEK 182 (190)
T ss_dssp EEECCCSSC--TTTSCCEEEEEETTT
T ss_pred EEECCcccc--cCCCCCEEEEEEcCC
Confidence 999999875 444556665555543
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.9e-17 Score=141.24 Aligned_cols=150 Identities=13% Similarity=0.127 Sum_probs=93.1
Q ss_pred CCCCCCCCCCceEEEEEccCCCCCcc--c----c--ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 31 QPPKTQVDPKKVRVVCMSDTHSLTPH--I----R--FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 31 ~~~~~~~~~~~mrI~~iSDlH~~~~~--l----~--~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
.+-..|..++.|||+++||+|++... + . .+..++|+|+++||+++ .+++++|+++. .|+++|+|
T Consensus 15 ~~~~~~~~~m~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~-------~~~l~~l~~~~-~~v~~V~G 86 (215)
T 2a22_A 15 VPRGSSSTDFGDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-------QEYVEMLKNIT-KNVYIVSG 86 (215)
T ss_dssp --------CCCEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-------HHHHHHHHHHC-SCEEECCC
T ss_pred ccCCCCccccCcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC-------HHHHHHHHHcC-CCEEEecC
Confidence 34445556667999999999987532 2 1 13468999999999986 24566777765 38999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCC
Q psy12823 103 NHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEF 182 (295)
Q Consensus 103 NHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~ 182 (295)
|||.+.... . .+|......
T Consensus 87 NHD~~~~~~-~-----------------------------------~~~~~~lp~------------------------- 105 (215)
T 2a22_A 87 DLDSAIFNP-D-----------------------------------PESNGVFPE------------------------- 105 (215)
T ss_dssp TTCCSCCBC-C-----------------------------------GGGTBCCCS-------------------------
T ss_pred CCcCccccc-C-----------------------------------hhhHhhCCc-------------------------
Confidence 999742110 0 000000000
Q ss_pred CCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCc
Q psy12823 183 CKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGR 262 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~ 262 (295)
. ..+ +. ++.+|+++|.+|... ..+...+.+.+ +..++++++|||+|.+.. ...++
T Consensus 106 -----~--------~~~-~~-~~~~i~l~Hg~~~~~--------~~~~~~l~~~~-~~~~~d~vl~GHtH~~~~-~~~~~ 160 (215)
T 2a22_A 106 -----Y--------VVV-QI-GEFKIGLMHGNQVLP--------WDDPGSLEQWQ-RRLDCDILVTGHTHKLRV-FEKNG 160 (215)
T ss_dssp -----E--------EEE-EE-TTEEEEEECSTTSSS--------TTCHHHHHHHH-HHHTCSEEEECSSCCCEE-EEETT
T ss_pred -----e--------EEE-ec-CCeEEEEEcCCccCC--------CCCHHHHHHHH-hhcCCCEEEECCcCCCcc-EeeCC
Confidence 0 000 00 356899999887532 12334555555 467899999999999874 45578
Q ss_pred EEEEeCCcCCCC
Q psy12823 263 IIFINASTCDLN 274 (295)
Q Consensus 263 ~~~vn~g~~~~~ 274 (295)
+.++|||+.+..
T Consensus 161 ~~~inpGS~~~~ 172 (215)
T 2a22_A 161 KLFLNPGTATGA 172 (215)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEECCccccc
Confidence 899999998654
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=155.60 Aligned_cols=69 Identities=12% Similarity=0.139 Sum_probs=53.7
Q ss_pred CCCceEEEEEccCCCCCcc-------------------cc-----ccCCCCcEEEEcCCCCCCCC------HHHHHHHHH
Q psy12823 38 DPKKVRVVCMSDTHSLTPH-------------------IR-----FNIPDGDIFIHAGDFTRCGG------EEEVTEFNT 87 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~-------------------l~-----~~~~~~D~viiaGDl~~~g~------~~e~~~~~~ 87 (295)
....|||+++||+|+.... +. .+..++|+||++||+++.+. .++++.+.+
T Consensus 2 ~~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~ 81 (322)
T 2nxf_A 2 EDPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMA 81 (322)
T ss_dssp -CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHH
T ss_pred CCCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHH
Confidence 3467999999999997621 11 12368999999999999765 466777888
Q ss_pred HHhcCCCCcEEEEcCCCCCC
Q psy12823 88 WIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 88 ~L~~l~~~pv~~V~GNHD~~ 107 (295)
.|++++. |+++|+||||.+
T Consensus 82 ~l~~~~~-p~~~v~GNHD~~ 100 (322)
T 2nxf_A 82 ELDACSV-DVHHVWGNHEFY 100 (322)
T ss_dssp HHHTTCS-EEEECCCHHHHH
T ss_pred HHHhcCC-cEEEecCCCCcc
Confidence 8888764 999999999984
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=139.28 Aligned_cols=156 Identities=21% Similarity=0.221 Sum_probs=98.6
Q ss_pred ceEEEEEccCCCCCccc-----------------c-cc--CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEE
Q psy12823 41 KVRVVCMSDTHSLTPHI-----------------R-FN--IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVI 100 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l-----------------~-~~--~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V 100 (295)
.|||+++||+|++...+ . .+ ..++|.|+++||+++.+ .++..+.++|++++. |+++|
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~--~~~~~~~~~l~~l~~-~~~~v 77 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF--NDKNEYLRIWKALPG-RKILV 77 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS--CCTTSHHHHHHHSSS-EEEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc--hhHHHHHHHHHHCCC-CEEEE
Confidence 48999999999865421 0 01 25899999999999875 334457788888764 89999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCC
Q psy12823 101 AGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQP 180 (295)
Q Consensus 101 ~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~ 180 (295)
+||||.... .+...+.. .+
T Consensus 78 ~GNhD~~~~----------------------------------------~~~~~~~~------------------l~--- 96 (195)
T 1xm7_A 78 MGNHDKDKE----------------------------------------SLKEYFDE------------------IY--- 96 (195)
T ss_dssp CCTTCCCHH----------------------------------------HHTTTCSE------------------EE---
T ss_pred eCCCCCchh----------------------------------------hhhhhhhc------------------hh---
Confidence 999996310 00000100 00
Q ss_pred CCCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeec
Q psy12823 181 EFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSD 260 (295)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~ 260 (295)
.... +.++ ++.+|+++|+||....+.. ...+..++.+.+ .+.++++++|||+|.+......
T Consensus 97 ----------~~~~----l~~~-~~~~i~~~H~~~~~~~~~~---~~~~~~~l~~~~-~~~~~~~vi~GHtH~~~~~~~~ 157 (195)
T 1xm7_A 97 ----------DFYK----IIEH-KGKRILLSHYPAKDPITER---YPDRQEMVREIY-FKENCDLLIHGHVHWNREGIKC 157 (195)
T ss_dssp ----------SSEE----EEEE-TTEEEEEESSCSSCSSCCS---CHHHHHHHHHHH-HHTTCSEEEECCCCCCSCC--C
T ss_pred ----------HHHH----HHhc-CCcEEEEEccCCcCCCccc---ccchHHHHHHHH-HHcCCcEEEECCcCCCCccccc
Confidence 0000 0001 3568999999997542221 113346777777 4678999999999998865443
Q ss_pred ---C-cEEEEeCCcCCCCCCCCC
Q psy12823 261 ---G-RIIFINASTCDLNYLPTN 279 (295)
Q Consensus 261 ---g-~~~~vn~g~~~~~~~~~~ 279 (295)
+ ++.++|+|....+|+|..
T Consensus 158 g~~~~g~~~~nvg~~~~~~~pv~ 180 (195)
T 1xm7_A 158 ACKDYRIECINANVEWNDYKPIS 180 (195)
T ss_dssp CTTSSSCCEEECBGGGTTTCCEE
T ss_pred ccccCCcceEEEeEeccCCeeee
Confidence 1 445699998766666643
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.3e-17 Score=136.15 Aligned_cols=132 Identities=11% Similarity=0.143 Sum_probs=88.6
Q ss_pred CceEEEEEccCCCCCc--cc----c--ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTP--HI----R--FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPT 111 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~--~l----~--~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~ 111 (295)
.+|||+++||+|++.. .+ . .+..++|+|+++||+++ .+++++|+++. .|+++|+||||... .
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-------~~~~~~l~~~~-~~~~~v~GNhD~~~--~ 78 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------KESYDYLKTLA-GDVHIVRGDFDENL--N 78 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------HHHHHHHHHHC-SEEEECCCTTCCCT--T
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-------HHHHHHHHhcC-CCEEEEcCCcCccc--c
Confidence 3589999999998642 11 1 12357999999999986 24556677665 38999999999641 0
Q ss_pred CCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCc
Q psy12823 112 FTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPR 191 (295)
Q Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~ 191 (295)
+..... ++
T Consensus 79 -------------------------------------------lp~~~~-----~~------------------------ 86 (192)
T 1z2w_A 79 -------------------------------------------YPEQKV-----VT------------------------ 86 (192)
T ss_dssp -------------------------------------------SCSEEE-----EE------------------------
T ss_pred -------------------------------------------CCcceE-----EE------------------------
Confidence 000000 00
Q ss_pred hhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcC
Q psy12823 192 GEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTC 271 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~ 271 (295)
.++.+|+++|.+|.... .+...+.+.+ +..++++++|||+|.+.. ...++++++|||+.
T Consensus 87 -----------~~~~~i~l~Hg~~~~~~--------~~~~~l~~~~-~~~~~d~vi~GHtH~~~~-~~~~~~~~inpGS~ 145 (192)
T 1z2w_A 87 -----------VGQFKIGLIHGHQVIPW--------GDMASLALLQ-RQFDVDILISGHTHKFEA-FEHENKFYINPGSA 145 (192)
T ss_dssp -----------ETTEEEEEECSCCCCBT--------TCHHHHHHHH-HHHSSSEEECCSSCCCEE-EEETTEEEEECCCT
T ss_pred -----------ECCEEEEEECCCcCCCC--------CCHHHHHHHH-HhcCCCEEEECCcCcCcc-EeECCEEEEECCcc
Confidence 02457999998875321 2334555555 467899999999999874 45678899999998
Q ss_pred CCC
Q psy12823 272 DLN 274 (295)
Q Consensus 272 ~~~ 274 (295)
+..
T Consensus 146 ~~~ 148 (192)
T 1z2w_A 146 TGA 148 (192)
T ss_dssp TCC
T ss_pred ccc
Confidence 653
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.7e-17 Score=153.43 Aligned_cols=213 Identities=14% Similarity=0.154 Sum_probs=116.3
Q ss_pred CCCceEEEEEccCCCCCcc--------------------------cc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHH
Q psy12823 38 DPKKVRVVCMSDTHSLTPH--------------------------IR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFN 86 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~--------------------------l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~ 86 (295)
...+|||+++||+|+.... +. .+..++|+||++||+++.+...++..+.
T Consensus 36 ~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~ 115 (443)
T 2xmo_A 36 KDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELA 115 (443)
T ss_dssp SCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 4578999999999986421 10 1235799999999999988877776666
Q ss_pred HHHhcC---CCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEc--
Q psy12823 87 TWIGNL---PHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYL-- 161 (295)
Q Consensus 87 ~~L~~l---~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L-- 161 (295)
+.|+.+ + .|+++|+||||...... +.. .+... .+.-.... +.+...+....+.
T Consensus 116 ~~l~~l~~~~-~~~~~v~GNHD~~~~~~--~~~-------~~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 116 KKLTQVEKNG-TQVFVVPGNHDINNPWA--RKF-------EKDKQ---LPTDTISP---------TDFSKIYSDFGYEDA 173 (443)
T ss_dssp HHHHHHHHTT-CEEEEECCTTTSSCTTC--EEE-------ETTEE---EECCCCCH---------HHHHHHTCCCCCTTC
T ss_pred HHHHHHHhCC-CeEEEECCcCCCCCccc--ccc-------CCccc---ccccccCH---------HHHHHHhhhcChhhh
Confidence 666654 4 48999999999853110 000 00000 00000000 0111111110000
Q ss_pred -----cCCcE---EEcceEEEeecCCCC---------CCCCCcccCchhhhhhhccCCC--CCccEEEecCCCCCCCCCC
Q psy12823 162 -----QDEER---ILYGIKFYGTPWQPE---------FCKWAFNVPRGEACLSKWQDIP--ADTDVLISHTPPIGHGDLC 222 (295)
Q Consensus 162 -----~~~~~---~i~gv~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~~~IlvtH~pp~~~~D~~ 222 (295)
..... ..++++|++...... .....+...+.+++.+.+...+ ....|+++|+||....+..
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~ 253 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVI 253 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC-
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCccccccc
Confidence 00111 135788888653210 0001111222333333333221 3467999999997543321
Q ss_pred cCC-CccCcHHHHHHHHhhCCCcEEEeccccCCCCeee---cC-cEEEEeCCcCCC
Q psy12823 223 CTG-LRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITS---DG-RIIFINASTCDL 273 (295)
Q Consensus 223 ~~~-~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~---~g-~~~~vn~g~~~~ 273 (295)
... ...+..++.+.+ +++++++++|||+|....... .| ....+++|+...
T Consensus 254 ~~~~~~~~~~~l~~ll-~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~ 308 (443)
T 2xmo_A 254 QKGYTINYNQQVIDAL-TEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV 308 (443)
T ss_dssp -CCSBCTTHHHHHHHH-HHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS
T ss_pred ccccccccHHHHHHHH-HHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc
Confidence 111 123556788888 578999999999999875332 22 367788887643
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-17 Score=143.60 Aligned_cols=81 Identities=6% Similarity=-0.121 Sum_probs=52.3
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhC-CCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCCCCCCCEE
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRV-KPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPIV 283 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~-~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~~~~~~~~ 283 (295)
+.+|+++|++|....+... ....+..++.+.+ ... ++++++|||+|.+... ..+++.++|+|+++...+....+..
T Consensus 131 ~~~i~~~H~~p~~~~~~~~-~~~~~~~~l~~~~-~~~~~~~~vi~GHtH~~~~~-~~~~~~~in~Gs~~~~~~~~~~~~y 207 (252)
T 1nnw_A 131 GNEVFGVYGSPINPFDGEV-LAEQPTSYYEAIM-RPVKDYEMLIVASPMYPVDA-MTRYGRVVCPGSVGFPPGKEHKATF 207 (252)
T ss_dssp TEEEEEESSCSSCTTTCCC-CSSCCHHHHHHHH-GGGTTSSEEEESTTCSEEEE-EETTEEEEEECCSSSCSSSSCCEEE
T ss_pred CcEEEEEcCCCCCCccccc-CCCCCHHHHHHHH-hcCCCCCEEEECCccccceE-ecCCeEEEECCCccCCCCCCCcceE
Confidence 4589999999843221110 1123335677777 466 8999999999998754 4477899999998754443334444
Q ss_pred EEecC
Q psy12823 284 FDIAL 288 (295)
Q Consensus 284 ~~~~~ 288 (295)
..+++
T Consensus 208 ~il~~ 212 (252)
T 1nnw_A 208 ALVDV 212 (252)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 44443
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-17 Score=151.86 Aligned_cols=195 Identities=15% Similarity=0.163 Sum_probs=101.3
Q ss_pred CCCceEEEEEccCCCC----Cc--c----------cc-----ccCCCCcEEEEcCC-CCCCCCH--HHHHHHHHHHhcCC
Q psy12823 38 DPKKVRVVCMSDTHSL----TP--H----------IR-----FNIPDGDIFIHAGD-FTRCGGE--EEVTEFNTWIGNLP 93 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~----~~--~----------l~-----~~~~~~D~viiaGD-l~~~g~~--~e~~~~~~~L~~l~ 93 (295)
...+|||+++||+|++ .. . +. .+..++|+||++|| +++.+.. +....+.++|+++.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 4568999999999977 21 0 10 13358999999999 9987653 33345566666653
Q ss_pred C-CcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhc-cCCeEEccCCcE----E
Q psy12823 94 H-KHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDR-LTNCTYLQDEER----I 167 (295)
Q Consensus 94 ~-~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~L~~~~~----~ 167 (295)
. .|+++|+||||... .. .++ ++... ..++.++.+... .
T Consensus 95 ~~~pv~~i~GNHD~~~-~~-----------------------------~~~------~~l~~~g~nv~v~~~~~~~~~~~ 138 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-LK-----------------------------LFG------NFVTSISSDITFVMSFEPVDVEA 138 (336)
T ss_dssp HHSCEEECCC-------CH-----------------------------HHH------HHHHHHCSSEEECCSSSCEEEEC
T ss_pred hcCCEEEECCCCCccc-cc-----------------------------cHH------HHHHhcCCEEEEEecccccCceE
Confidence 1 38999999999752 10 000 11110 123566544321 1
Q ss_pred E--cceEEEeecCCCC-CCCCCccc---Cchhhhhhhcc-C--CCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHH
Q psy12823 168 L--YGIKFYGTPWQPE-FCKWAFNV---PRGEACLSKWQ-D--IPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQ 238 (295)
Q Consensus 168 i--~gv~i~G~~~~~~-~~~~~~~~---~~~~~~~~~~~-~--~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~ 238 (295)
+ +++.|+|.++... ...+.+.. .+.+++.+.+. . .++.+.|+++|+|+.+....... .......+...+
T Consensus 139 ~~~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~-~~~~~~~v~~~l- 216 (336)
T 2q8u_A 139 KRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGI-EQGREIIINRAL- 216 (336)
T ss_dssp TTSCEEEEEEECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC---------CCCEECGGG-
T ss_pred EeCCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCc-cchhhcccCHHH-
Confidence 2 4588999986431 10111100 01122222221 1 23567899999998754211000 000000011112
Q ss_pred hhCCCcEEEeccccCCCCeeecCcEEEEeCCcCC
Q psy12823 239 QRVKPKYHVFGHVHEGYGITSDGRIIFINASTCD 272 (295)
Q Consensus 239 ~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~ 272 (295)
...+++++++||+|.++... +...++|+|+..
T Consensus 217 ~~~~~d~v~~GH~H~~~~~~--~~~~i~y~GS~~ 248 (336)
T 2q8u_A 217 IPSVVDYAALGHIHSFREIQ--KQPLTIYPGSLI 248 (336)
T ss_dssp SCTTSSEEEEESCSSCEEEE--ETTEEEECCCSS
T ss_pred ccccCCEEEEccccCceEeC--CCccEEECCCCc
Confidence 24579999999999987543 335788999874
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=7e-17 Score=143.59 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCCCCceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 36 QVDPKKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 36 ~~~~~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
+....++||+++||+|++...+. ....++|.|+++||+++.|... .+++++|+++ .|+++|+||||.+
T Consensus 6 ~~~~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~--~~~~~~l~~~--~~~~~v~GNhD~~ 78 (270)
T 3qfm_A 6 HHHMDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGR--RRILDLLDQL--PITARVLGNWEDS 78 (270)
T ss_dssp -----CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS--HHHHHHHHTS--CEEEECCCHHHHH
T ss_pred cccccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH--HHHHHHHHcc--CCEEEEcCChHHH
Confidence 45677899999999999876542 2335899999999999987643 3678888887 3799999999974
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=129.97 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=46.6
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNY 275 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~ 275 (295)
+.+|+++|++|... ..+..++.+.+ ++.++++++|||+|.+.. ...++++++|||+.+.+.
T Consensus 77 ~~~i~~~Hg~~~~~--------~~~~~~l~~~~-~~~~~d~vi~GHtH~~~~-~~~~~~~~inpGs~~~~~ 137 (176)
T 3ck2_A 77 STKIIQTHGHLFDI--------NFNFQKLDYWA-QEEEAAICLYGHLHVPSA-WLEGKILFLNPGSISQPR 137 (176)
T ss_dssp TEEEEEECSGGGTT--------TTCSHHHHHHH-HHTTCSEEECCSSCCEEE-EEETTEEEEEECCSSSCC
T ss_pred CeEEEEECCCccCC--------CCCHHHHHHHH-HhcCCCEEEECCcCCCCc-EEECCEEEEECCCCCcCC
Confidence 46799999998643 13446677777 478999999999999875 345778999999987543
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-16 Score=144.04 Aligned_cols=66 Identities=15% Similarity=0.169 Sum_probs=47.3
Q ss_pred eEEEEEccCCCCCcc-------------c-----cccCCCCcEEEEcCCCCCCCC--HHHHHHHHHHHhcCC--CCcEEE
Q psy12823 42 VRVVCMSDTHSLTPH-------------I-----RFNIPDGDIFIHAGDFTRCGG--EEEVTEFNTWIGNLP--HKHKLV 99 (295)
Q Consensus 42 mrI~~iSDlH~~~~~-------------l-----~~~~~~~D~viiaGDl~~~g~--~~e~~~~~~~L~~l~--~~pv~~ 99 (295)
|||+++||+|++... + .....++|+||++||+++.+. .+....+.+.|+++. ..|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 899999999998631 1 023468999999999998653 234445555555432 248999
Q ss_pred EcCCCCCC
Q psy12823 100 IAGNHELS 107 (295)
Q Consensus 100 V~GNHD~~ 107 (295)
|+||||.+
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999975
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-17 Score=143.11 Aligned_cols=64 Identities=20% Similarity=0.308 Sum_probs=48.9
Q ss_pred CceEEEEEccCCCCCcccc---ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR---FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~---~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
.+|||+++||+|++...+. ....++|.|+++||+++.|.... ++++.|++++ .+++|+||||.+
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~~~d~ii~~GDl~~~g~~~~--~~~~~l~~~~--~~~~v~GNhD~~ 68 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAGRVDDIWSLGDIVGYGPRPR--ECVELVRVLA--PNISVIGNHDWA 68 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHCSCSEEEECSCCSSSSSCHH--HHHHHHHHHC--SSEECCCHHHHH
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhccCCCEEEECCCcCCCCCCHH--HHHHHHHhcC--CCEEEeCchHHH
Confidence 5699999999998776542 11128999999999999876332 5667777764 369999999975
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.63 E-value=2e-15 Score=126.07 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=43.3
Q ss_pred CCCCceEEEEEccCCC--CCcccc----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCC
Q psy12823 37 VDPKKVRVVCMSDTHS--LTPHIR----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHEL 106 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~--~~~~l~----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~ 106 (295)
....+|||+++||+|+ +...+. ....++|.|+++||+++. +++++|+++. .|+++|+||||.
T Consensus 18 ~~~~mmri~~iSD~Hg~~~~~~l~~~l~~~~~~~D~ii~~GD~~~~-------~~~~~l~~~~-~~v~~V~GNhD~ 85 (178)
T 2kkn_A 18 YFQGVKRFLLISDSHVPVRMASLPDEILNSLKEYDGVIGLGDYVDL-------DTVILLEKFS-KEFYGVHGNMDY 85 (178)
T ss_dssp ----CEEEEEECCCCBTTTTCCCCHHHHHGGGGCSEEEESSCBSCH-------HHHHHHHHHT-SSEEECCCSSSC
T ss_pred ccCcceEEEEEecccCCCCHHHHHHHHHHHhcCCCEEEECCCCCCH-------HHHHHHHhcC-CCEEEEECCCCc
Confidence 3445699999999996 323331 112689999999999872 4566666654 489999999996
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.62 E-value=5.7e-16 Score=144.14 Aligned_cols=209 Identities=11% Similarity=0.091 Sum_probs=109.1
Q ss_pred eEEEEEccCCCCCc----c------------cc-----ccCCCCcEEEEcCCCC-CCCC--HHHHHHHHHHHhcCCC-Cc
Q psy12823 42 VRVVCMSDTHSLTP----H------------IR-----FNIPDGDIFIHAGDFT-RCGG--EEEVTEFNTWIGNLPH-KH 96 (295)
Q Consensus 42 mrI~~iSDlH~~~~----~------------l~-----~~~~~~D~viiaGDl~-~~g~--~~e~~~~~~~L~~l~~-~p 96 (295)
|||+++||+|++.. . +. ....++|+||++||++ +.+. ...+..+.++|.++.. .|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 89999999999875 1 10 1235899999999999 6543 3334444444443321 48
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhh-hccCCeEEcc-CCcEEEc-----
Q psy12823 97 KLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMR-DRLTNCTYLQ-DEERILY----- 169 (295)
Q Consensus 97 v~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~L~-~~~~~i~----- 169 (295)
+++|+||||.... ..+ .... ....++.++. .+.+.+.
T Consensus 81 v~~i~GNHD~~~~------------------------------~~~------~~~~~~~~~~~~~~~~~~~v~l~~~~G~ 124 (379)
T 3tho_B 81 VVVLPGNQDWKGL------------------------------KLF------GNFVTSISSDITFVMSFEPVDVEAKRGQ 124 (379)
T ss_dssp EEECCCTTSCTTH------------------------------HHH------HHHHHTTCSSEEECCSSCCEEEECTTCC
T ss_pred EEEEcCCCccccC------------------------------ccc------cccccccCCcceeecccceEEEEcCCCC
Confidence 9999999995310 000 0010 0123444443 2334442
Q ss_pred ceEEEeecCCCCCC-CCCcccCchhhhhhhcc----C--CCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCC
Q psy12823 170 GIKFYGTPWQPEFC-KWAFNVPRGEACLSKWQ----D--IPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVK 242 (295)
Q Consensus 170 gv~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~----~--~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~ 242 (295)
.+.|+|.+|..... ...+.....+++.+.+. . .++...|+++|.++.+............ ..+...+ ...+
T Consensus 125 ~v~i~glp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~-~~v~~~~-~~~~ 202 (379)
T 3tho_B 125 KVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGRE-IIINRAL-IPSV 202 (379)
T ss_dssp EEEEEEECCCCCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC-------CS-CCBCGGG-SCTT
T ss_pred EEEEEECCCCCHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCccccc-cccCHHH-cCcC
Confidence 38899998743110 01111111111221111 1 1356789999999875422000000000 0111112 1357
Q ss_pred CcEEEeccccCCCCeeecCcEEEEeCCcCCC-CCCCCC-CCEEEEecCCC
Q psy12823 243 PKYHVFGHVHEGYGITSDGRIIFINASTCDL-NYLPTN-PPIVFDIALPP 290 (295)
Q Consensus 243 ~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~-~~~~~~-~~~~~~~~~~~ 290 (295)
++||++||+|.+.. ..+...++|+|+... ++.... +.-++.+++.+
T Consensus 203 ~dyvalGH~H~~q~--~~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~ 250 (379)
T 3tho_B 203 VDYAALGHIHSFRE--IQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 250 (379)
T ss_dssp SSEEEEESCSSCEE--EEETTEEEECCCSSCCSGGGSSSCCEEEEEECCS
T ss_pred CCEEEcccccCCeE--eCCCCcEEecCCCCCCCcccccCCCEEEEEEEcC
Confidence 89999999999853 233347899998732 443333 34455555544
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.6e-15 Score=127.44 Aligned_cols=68 Identities=16% Similarity=0.302 Sum_probs=50.3
Q ss_pred CCceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCH----H--HHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 39 PKKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGE----E--EVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~----~--e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
..+|||+++||+|++...++ .+..++|.|+++||+++.+.. . +..+++++|+++. .++++|+||||..
T Consensus 23 ~~mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~-~~v~~V~GNHD~~ 101 (208)
T 1su1_A 23 NAMMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA-HKVIAVRGNCDSE 101 (208)
T ss_dssp --CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG-GGEEECCCTTCCH
T ss_pred cccEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC-CceEEEECCCchH
Confidence 34599999999998765431 122579999999999987652 1 1356788888875 4899999999963
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.60 E-value=7.2e-15 Score=137.52 Aligned_cols=190 Identities=14% Similarity=0.075 Sum_probs=103.0
Q ss_pred CCCCceEEEEEccCCCCCcc------------c-----cccCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhc------
Q psy12823 37 VDPKKVRVVCMSDTHSLTPH------------I-----RFNIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGN------ 91 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~------------l-----~~~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~------ 91 (295)
.+..+|||+++||+|++... + .....++|+||++||+++.+.. +....+++.|++
T Consensus 9 ~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~ 88 (417)
T 4fbw_A 9 HNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDK 88 (417)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSC
T ss_pred CCCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCC
Confidence 46778999999999998531 1 1234689999999999997653 344455555544
Q ss_pred ------CC-----------------------CCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhh
Q psy12823 92 ------LP-----------------------HKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSL 142 (295)
Q Consensus 92 ------l~-----------------------~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 142 (295)
+. ..|||+|+||||......+. .+ .+.|
T Consensus 89 ~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~----------s~-------------~~lL 145 (417)
T 4fbw_A 89 PCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRY----------SA-------------LDIL 145 (417)
T ss_dssp CCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CC----------CH-------------HHHH
T ss_pred cccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccc----------cH-------------HHHh
Confidence 21 35899999999975322110 00 0111
Q ss_pred HHHHHhhhhhhccCCeEEccCC---------cEEE--c--ceEEEeecCCCCCCCCCcccCchhhhhhhccC---CCCCc
Q psy12823 143 TEAVKARNMRDRLTNCTYLQDE---------ERIL--Y--GIKFYGTPWQPEFCKWAFNVPRGEACLSKWQD---IPADT 206 (295)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~L~~~---------~~~i--~--gv~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 206 (295)
. ....+.+.... .+.+ + .+.++|.++.... .......+...+.+.. ..+..
T Consensus 146 ~----------~~g~v~l~g~~~~~~~i~~~pv~l~~g~~~valyG~~~~~d~---rl~r~~~~~~v~~~~p~~~~~~~~ 212 (417)
T 4fbw_A 146 Q----------VTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVRDE---RLYHSFRENKVKFLRPDLYRDEWF 212 (417)
T ss_dssp H----------HTTSCEECCCCC---CEEECCEEEEETTEEEEEEEECCCCHH---HHHHHHHTTCEEEEEESTTTTTSE
T ss_pred c----------cCCeEEEeCCcccCCceeEEeEEEEecCceEEEEeccCCchh---hhhhhhhhhhhhhcCcccccCCce
Confidence 0 01111121110 1222 1 3788898864300 0000000000011111 12457
Q ss_pred cEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCee---ecCcEEEEeCCcCC
Q psy12823 207 DVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGIT---SDGRIIFINASTCD 272 (295)
Q Consensus 207 ~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~---~~g~~~~vn~g~~~ 272 (295)
.|++.|+...+.... ..... .+ ....+++|++||+|.+.... ..+++.++|||+..
T Consensus 213 nIlvlH~~~~~~~~~----~yip~-----~l-~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~ 271 (417)
T 4fbw_A 213 NLLTVHQNHSAHTPT----SYLPE-----SF-IQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTI 271 (417)
T ss_dssp EEEEEESCSSCSSSS----SSCCG-----GG-SCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSS
T ss_pred EEEEecCCccCCCCc----ccCch-----hH-hhcCCCEEEecCccccceeccccCCCCEEEEECCCCC
Confidence 899999986543111 01111 12 25679999999999988542 25688999999974
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.7e-16 Score=138.63 Aligned_cols=78 Identities=13% Similarity=0.091 Sum_probs=49.3
Q ss_pred hhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCC
Q psy12823 193 EACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCD 272 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~ 272 (295)
+++.+.+...+.+..|+++|+||....... ....-...+.+++ .++++++++|||+|........+++.++++|+++
T Consensus 167 ~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~--~~~~~~~~l~~~l-~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~ 243 (313)
T 1ute_A 167 AWIKKQLAAAKEDYVLVAGHYPVWSIAEHG--PTHCLVKQLLPLL-TTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGN 243 (313)
T ss_dssp HHHHHHHHHCCCSEEEEECSSCSSCCSSSC--CCHHHHHHTHHHH-HHTTCSEEEECSSSSEEEEECTTCCEEEEECBSS
T ss_pred HHHHHHHHhCCCCeEEEEECCCCccCCCCC--CcHHHHHHHHHHH-HHcCCcEEEECChhhhhhccCCCCceEEEECCCc
Confidence 344444444445678999999997542211 0000113455566 4779999999999975544435677788888776
Q ss_pred C
Q psy12823 273 L 273 (295)
Q Consensus 273 ~ 273 (295)
.
T Consensus 244 ~ 244 (313)
T 1ute_A 244 F 244 (313)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.4e-15 Score=137.61 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=53.3
Q ss_pred CCCCCCCCceEEEEEccCCCCCcc------------c-----cccCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhcC-
Q psy12823 33 PKTQVDPKKVRVVCMSDTHSLTPH------------I-----RFNIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGNL- 92 (295)
Q Consensus 33 ~~~~~~~~~mrI~~iSDlH~~~~~------------l-----~~~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~l- 92 (295)
...+....+|||+++||+|++... + .....++|+||++||+++.+.. +....+.+.|+++
T Consensus 24 ~~~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~ 103 (431)
T 3t1i_A 24 ADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYC 103 (431)
T ss_dssp ---CCGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHh
Confidence 444567788999999999997532 1 0234699999999999997653 4555666666532
Q ss_pred ----------------------------------CCCcEEEEcCCCCCC
Q psy12823 93 ----------------------------------PHKHKLVIAGNHELS 107 (295)
Q Consensus 93 ----------------------------------~~~pv~~V~GNHD~~ 107 (295)
...||++|.||||..
T Consensus 104 ~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 104 MGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp BCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred ccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 125999999999975
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=136.33 Aligned_cols=71 Identities=18% Similarity=0.150 Sum_probs=50.4
Q ss_pred CCCCceEEEEEccCCCCCcc------------c-----cccCCCCcEEEEcCCCCCCCCH--HHHHHHHHHHhc------
Q psy12823 37 VDPKKVRVVCMSDTHSLTPH------------I-----RFNIPDGDIFIHAGDFTRCGGE--EEVTEFNTWIGN------ 91 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~------------l-----~~~~~~~D~viiaGDl~~~g~~--~e~~~~~~~L~~------ 91 (295)
.+..+|||+++||+|++... + .....++|+||++||+++.+.. +....+++.|++
T Consensus 72 ~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~ 151 (472)
T 4fbk_A 72 GSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDK 151 (472)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSC
T ss_pred CCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCC
Confidence 35678999999999997532 1 1234799999999999997763 334445555443
Q ss_pred ------C-----------------------CCCcEEEEcCCCCCC
Q psy12823 92 ------L-----------------------PHKHKLVIAGNHELS 107 (295)
Q Consensus 92 ------l-----------------------~~~pv~~V~GNHD~~ 107 (295)
+ ...|||+|+||||..
T Consensus 152 ~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 152 PCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred cchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 135999999999975
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.1e-15 Score=139.48 Aligned_cols=183 Identities=11% Similarity=0.063 Sum_probs=97.9
Q ss_pred CCCCceEEEEEccCCCCCcc---cc-c-c-CCCCcEEEEcCCCCCCCC--------HHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 37 VDPKKVRVVCMSDTHSLTPH---IR-F-N-IPDGDIFIHAGDFTRCGG--------EEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~---l~-~-~-~~~~D~viiaGDl~~~g~--------~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
....+|||+++||+|..... +. . . ..++|+||++||+++... .+++..+++.+.+. .|+++++|
T Consensus 115 ~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~--~P~~~v~G 192 (424)
T 2qfp_A 115 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY--QPWIWTAG 192 (424)
T ss_dssp CTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTT--SCEEECCC
T ss_pred CCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhc--CCeEeecC
Confidence 34678999999999986432 11 1 2 248999999999997532 12344444444442 49999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccC-CeEEccC--CcEEEcceEEEeecCC
Q psy12823 103 NHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLT-NCTYLQD--EERILYGIKFYGTPWQ 179 (295)
Q Consensus 103 NHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~L~~--~~~~i~gv~i~G~~~~ 179 (295)
|||........... ... ... ..+. +.. +.....+ -+++++++.|++++..
T Consensus 193 NHD~~~~~~~~~~~--------------------~~~-~~~-----~~f~-~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~ 245 (424)
T 2qfp_A 193 NHEIEFAPEINETE--------------------PFK-PFS-----YRYH-VPYEASQSTSPFWYSIKRASAHIIVLSSY 245 (424)
T ss_dssp HHHHCCBGGGTBCS--------------------TTH-HHH-----HHCC-CCGGGGTCSSTTSEEEEETTEEEEECCTT
T ss_pred CcccccCCcccccc--------------------cch-hhh-----hhcc-CCccccCCCCCcEEEEEECCEEEEEecCC
Confidence 99975321100000 000 000 0010 000 0000001 1456678899987632
Q ss_pred CCCCCCCcccCchhhhhhhccCCC---CCccEEEecCCCCCCCCCCc-CCCccCcHHHHHHHHhhCCCcEEEeccccC
Q psy12823 180 PEFCKWAFNVPRGEACLSKWQDIP---ADTDVLISHTPPIGHGDLCC-TGLRAGCVELLTTVQQRVKPKYHVFGHVHE 253 (295)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~IlvtH~pp~~~~D~~~-~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~ 253 (295)
..++ ....+.+++.+.+.+.+ ....|+++|+|+........ .+... ...+.+++ .++++++++|||+|.
T Consensus 246 ~~~~---~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~-r~~l~~ll-~~~~VdlvlsGH~H~ 318 (424)
T 2qfp_A 246 SAYG---RGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAM-RTKFEAWF-VKYKVDVVFAGHVHA 318 (424)
T ss_dssp SCCS---TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHH-HHHHHHHH-HHTTCSEEEECSSSS
T ss_pred ccCC---CcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHH-HHHHHHHH-HHhCCcEEEECChhh
Confidence 2111 11223445555554432 23568889999874422110 00000 12455566 578999999999998
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=134.51 Aligned_cols=205 Identities=12% Similarity=0.058 Sum_probs=109.3
Q ss_pred CCCCceEEEEEccCCCCCcc---cc-c--cCCCCcEEEEcCCCCCCCC-----HHHHHHHHHHHhcCC-CCcEEEEcCCC
Q psy12823 37 VDPKKVRVVCMSDTHSLTPH---IR-F--NIPDGDIFIHAGDFTRCGG-----EEEVTEFNTWIGNLP-HKHKLVIAGNH 104 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~---l~-~--~~~~~D~viiaGDl~~~g~-----~~e~~~~~~~L~~l~-~~pv~~V~GNH 104 (295)
....++||+++||+|..... +. . ...++|+||++||+++... ..++..+.+.++.+. ..|+++++|||
T Consensus 122 ~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNH 201 (426)
T 1xzw_A 122 GPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNH 201 (426)
T ss_dssp CTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGG
T ss_pred CCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEecccc
Confidence 35688999999999986422 11 1 2248999999999997422 123333334443321 24999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCC-eEEccC--CcEEEcceEEEeecCCCC
Q psy12823 105 ELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTN-CTYLQD--EERILYGIKFYGTPWQPE 181 (295)
Q Consensus 105 D~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~L~~--~~~~i~gv~i~G~~~~~~ 181 (295)
|.......... ... .... ..|. +..+ .....+ -+++++++.|+++.....
T Consensus 202 D~~~~~~~~~~--------------------~~~-~~~~-----~~f~-~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~ 254 (426)
T 1xzw_A 202 EIDYAPDIGEY--------------------QPF-VPFT-----NRYP-TPHEASGSGDPLWYAIKRASAHIIVLSSYSG 254 (426)
T ss_dssp GCCCBGGGTBC--------------------STT-HHHH-----HHSC-CCCGGGTCSSTTSEEEEETTEEEEECCTTSC
T ss_pred ccccCCccccc--------------------cCC-hhhe-----EEEe-CCcccCCCCCCCeEEEEECCEEEEEeeCccc
Confidence 98632110000 000 0000 0110 0000 000111 134567788988763221
Q ss_pred CCCCCcccCchhhhhhhccCCC--C-CccEEEecCCCCCCCCCCc-CCCccCcHHHHHHHHhhCCCcEEEeccccCCCCe
Q psy12823 182 FCKWAFNVPRGEACLSKWQDIP--A-DTDVLISHTPPIGHGDLCC-TGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGI 257 (295)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~IlvtH~pp~~~~D~~~-~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~ 257 (295)
+.....+.+++.+.+++.+ + ...|+++|+|++....... .+. .-...+.+++ .++++++++|||+|.....
T Consensus 255 ---~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~-~~r~~l~~ll-~~~~VdlvlsGH~H~~~r~ 329 (426)
T 1xzw_A 255 ---FVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGE-AMRAIFEPYF-VYYKVDIVFSGHVHSYERS 329 (426)
T ss_dssp ---CSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTH-HHHHHHHHHH-HHTTCSEEEECSSSSEEEE
T ss_pred ---CCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCH-HHHHHHHHHH-HHhCCCEEEEcChhhheee
Confidence 1112223444555554432 2 3479999999875422100 010 0123455566 5789999999999985421
Q ss_pred e------------------ecCcEEEEeCCcCCC
Q psy12823 258 T------------------SDGRIIFINASTCDL 273 (295)
Q Consensus 258 ~------------------~~g~~~~vn~g~~~~ 273 (295)
. ..+++++|..|.++.
T Consensus 330 ~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 330 ERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CSEECCCCCSTTCCCCCEECTTSCEEEEECCSCC
T ss_pred eeecCccccccCCccccccCCCccEEEEeCCCcc
Confidence 1 134678888887654
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.42 E-value=8.3e-14 Score=127.61 Aligned_cols=69 Identities=9% Similarity=-0.013 Sum_probs=46.5
Q ss_pred CceEEEEEccCCCCCcc-------c--cccCCCCcEEEEcCCCCCCCCH----HHHHHHHHHH-hc---CCCCcEEEEcC
Q psy12823 40 KKVRVVCMSDTHSLTPH-------I--RFNIPDGDIFIHAGDFTRCGGE----EEVTEFNTWI-GN---LPHKHKLVIAG 102 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~-------l--~~~~~~~D~viiaGDl~~~g~~----~e~~~~~~~L-~~---l~~~pv~~V~G 102 (295)
..+||++++|+|.+... + ..+..+||+||++||+++.|.. ..+.+.++.+ .. ....|++.|+|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 46899999999986532 1 1234799999999999987642 2333333322 11 12359999999
Q ss_pred CCCCCC
Q psy12823 103 NHELSF 108 (295)
Q Consensus 103 NHD~~~ 108 (295)
|||++.
T Consensus 82 NHD~~~ 87 (342)
T 3tgh_A 82 TRDWTG 87 (342)
T ss_dssp HHHHTS
T ss_pred CCccCC
Confidence 999864
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=111.15 Aligned_cols=63 Identities=24% Similarity=0.303 Sum_probs=47.2
Q ss_pred CceEEEEEccCCCCCcccc-----ccC-CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNI-PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~-~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
..|||+++||+|++...+. ... .++|.||++||++++|.... ++++.|.+ .++++|.||||..
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~--~~~~~l~~---~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV--ECLELITF---PWFRAVRGNHEQM 79 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH--HHHGGGGS---TTEEECCCHHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH--HHHHHHhc---CCEEEEccCcHHH
Confidence 4589999999998866541 222 47899999999999886432 45555554 3799999999964
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=99.09 E-value=5.7e-10 Score=107.58 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=44.7
Q ss_pred CCCceEEEEEccCCCCCcc----------c----c-ccC----CCC-cEEEEcCCCCCCCCHHH---HHHHHHHHhcCCC
Q psy12823 38 DPKKVRVVCMSDTHSLTPH----------I----R-FNI----PDG-DIFIHAGDFTRCGGEEE---VTEFNTWIGNLPH 94 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~----------l----~-~~~----~~~-D~viiaGDl~~~g~~~e---~~~~~~~L~~l~~ 94 (295)
....|+|+++||+|..... + + .+. .++ ++++.+||+++...... .+...+.|..+.
T Consensus 5 ~~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg- 83 (516)
T 1hp1_A 5 KTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG- 83 (516)
T ss_dssp CCEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT-
T ss_pred CceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC-
Confidence 4567999999999986421 1 0 111 135 79999999986332211 134566777765
Q ss_pred CcEEEEcCCCCCC
Q psy12823 95 KHKLVIAGNHELS 107 (295)
Q Consensus 95 ~pv~~V~GNHD~~ 107 (295)
+.++++||||+.
T Consensus 84 -~d~~~~GNHEfd 95 (516)
T 1hp1_A 84 -YDAMAIGNHEFD 95 (516)
T ss_dssp -CCEEECCGGGGS
T ss_pred -CCEEeecccccc
Confidence 358999999974
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.3e-09 Score=101.72 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=45.4
Q ss_pred CCceEEEEEccCCCCCc----------------cc-----cccCCCCc-EEEEcCCCCCCCCHHHH--------HHHHHH
Q psy12823 39 PKKVRVVCMSDTHSLTP----------------HI-----RFNIPDGD-IFIHAGDFTRCGGEEEV--------TEFNTW 88 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~----------------~l-----~~~~~~~D-~viiaGDl~~~g~~~e~--------~~~~~~ 88 (295)
...++|+++||+|+... .+ +.+...++ +++.+||+++......+ +...+.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 47899999999997642 11 11334555 67779999985433321 467788
Q ss_pred HhcCCCCcEEEEcCCCCCC
Q psy12823 89 IGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 89 L~~l~~~pv~~V~GNHD~~ 107 (295)
|..+.. -++++||||+.
T Consensus 97 ln~lg~--D~~t~GNHefd 113 (527)
T 3qfk_A 97 YNRMAF--DFGTLGNHEFN 113 (527)
T ss_dssp HHHTCC--CEECCCGGGGT
T ss_pred HHhcCC--cEEeccccccc
Confidence 888753 46889999974
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.85 E-value=8.3e-08 Score=93.35 Aligned_cols=53 Identities=23% Similarity=0.205 Sum_probs=36.7
Q ss_pred CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhh-CCCcEEEeccccCCCCe-eecCcEEEEeCCcCCC
Q psy12823 205 DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQR-VKPKYHVFGHVHEGYGI-TSDGRIIFINASTCDL 273 (295)
Q Consensus 205 ~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~-~~~~~~l~GH~H~~~~~-~~~g~~~~vn~g~~~~ 273 (295)
+..|+++|.+... | .++ . ++ ..+|++++||+|..... ...++++++.+|..+.
T Consensus 256 d~iIvLsH~g~~~--d----------~~l---a-~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~~g~ 310 (562)
T 2wdc_A 256 NAVVLLSHNGMQL--D----------AAL---A-ERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAGK 310 (562)
T ss_dssp SEEEEEECSCHHH--H----------HHH---H-TTSSSCCEEEECSSCCCCSSCEEETTEEEEECCSTTC
T ss_pred CEEEEEeCCCCcc--h----------HHH---H-hcCCCCcEEEeCCCCCCCccCEEECCEEEEecCcccc
Confidence 5678999988420 1 112 2 33 47999999999997753 2347899999998754
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=7.6e-08 Score=92.57 Aligned_cols=66 Identities=21% Similarity=0.359 Sum_probs=44.7
Q ss_pred CCceEEEEEccCCCCCcc---------------c--------cccCCCCcEEEE-cCCCCCCCCH-H---HHHHHHHHHh
Q psy12823 39 PKKVRVVCMSDTHSLTPH---------------I--------RFNIPDGDIFIH-AGDFTRCGGE-E---EVTEFNTWIG 90 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~---------------l--------~~~~~~~D~vii-aGDl~~~g~~-~---e~~~~~~~L~ 90 (295)
...++|+++||+|+.... + +.+...+|.|++ +||+++ |+. . ..+...+.|.
T Consensus 4 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~-g~~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 4 AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFT-GPYISSLTKGKAIIDIMN 82 (509)
T ss_dssp CEEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSS-SSHHHHTTTTHHHHHHHT
T ss_pred ceEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCC-CchhhhhcCChHHHHHHH
Confidence 356899999999975321 1 112346788877 999998 442 1 1135677888
Q ss_pred cCCCCcEEEEcCCCCCC
Q psy12823 91 NLPHKHKLVIAGNHELS 107 (295)
Q Consensus 91 ~l~~~pv~~V~GNHD~~ 107 (295)
.+. +-++++||||+.
T Consensus 83 ~lg--~D~~tlGNHEfd 97 (509)
T 3ive_A 83 TMP--FDAVTIGNHEFD 97 (509)
T ss_dssp TSC--CSEECCCGGGGT
T ss_pred hcC--CcEEeecccccc
Confidence 775 347889999975
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.76 E-value=2.8e-08 Score=96.49 Aligned_cols=68 Identities=21% Similarity=0.207 Sum_probs=45.3
Q ss_pred CCCceEEEEEccCCCCCc-----------------cc-----cccCCCCc-EEEEcCCCCCCCCHHH---HHHHHHHHhc
Q psy12823 38 DPKKVRVVCMSDTHSLTP-----------------HI-----RFNIPDGD-IFIHAGDFTRCGGEEE---VTEFNTWIGN 91 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~-----------------~l-----~~~~~~~D-~viiaGDl~~~g~~~e---~~~~~~~L~~ 91 (295)
....++|+++||+|.... .+ ..+...+| +++.+||+++...... .+...+.|..
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp --CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 556799999999997532 11 11223577 8899999998543221 2356677887
Q ss_pred CCCCcEEEEcCCCCCC
Q psy12823 92 LPHKHKLVIAGNHELS 107 (295)
Q Consensus 92 l~~~pv~~V~GNHD~~ 107 (295)
+. +.+++.||||+.
T Consensus 106 lg--~d~~~lGNHEfd 119 (552)
T 2z1a_A 106 LR--YRAMALGNHEFD 119 (552)
T ss_dssp TT--CCEEECCGGGGT
T ss_pred cC--CCcccccccccc
Confidence 75 458999999985
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.62 E-value=9.9e-09 Score=91.33 Aligned_cols=63 Identities=19% Similarity=0.344 Sum_probs=48.9
Q ss_pred eEEEEEccCCCCCcccc-----ccC-CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNI-PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~-~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|||++|||+|+....+. ... .++|.++++||++++|.... +++++|.+++. ++++|.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~--~~l~~l~~l~~-~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL--DVLRYVKSLGD-SVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH--HHHHHHHHTGG-GEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH--HHHHHHHhCCC-ceEEEECCCcHH
Confidence 89999999999876541 222 47899999999999887443 57777777753 799999999974
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-07 Score=90.41 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=45.6
Q ss_pred CceEEEEEccCCCCCcccc-----ccCC-CCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIP-DGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~-~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
..|||+++||+|+....+. .... ..|.+|+.||++++|.... +++..|..+ ....++++.||||..
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~--e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchH--HHHHHHHHHHhhCCCceEeecCCccHH
Confidence 4699999999999876541 1222 3467999999999987432 344444332 113699999999963
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=98.59 E-value=8.4e-09 Score=90.87 Aligned_cols=62 Identities=19% Similarity=0.365 Sum_probs=45.8
Q ss_pred ceEEEEEccCCCCCcccc-----ccCCC-CcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHIR-----FNIPD-GDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l~-----~~~~~-~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
.+||+++||+|+....+. ..... .|.+|++||++++|.... ++++.|.++ ++++|+||||..
T Consensus 18 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~--~~l~~l~~~---~~~~v~GNHd~~ 85 (262)
T 2qjc_A 18 TGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF--GVVRLLKRL---GAYSVLGNHDAK 85 (262)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH--HHHHHHHHH---TCEECCCHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH--HHHHHHHHC---CCEEEeCcChHH
Confidence 349999999998765441 23334 499999999999876432 456666653 689999999964
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.44 E-value=1e-06 Score=85.53 Aligned_cols=74 Identities=23% Similarity=0.280 Sum_probs=49.0
Q ss_pred CCCCCCCCCceEEEEEccCCCCCcc-------------c-------cc--cCCCCc-EEEEcCCCCCCCCHHH-----HH
Q psy12823 32 PPKTQVDPKKVRVVCMSDTHSLTPH-------------I-------RF--NIPDGD-IFIHAGDFTRCGGEEE-----VT 83 (295)
Q Consensus 32 ~~~~~~~~~~mrI~~iSDlH~~~~~-------------l-------~~--~~~~~D-~viiaGDl~~~g~~~e-----~~ 83 (295)
.+..+.....++|++++|+|+.... + +. +..++| +++.+||+++...... -+
T Consensus 6 ~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~ 85 (557)
T 3c9f_A 6 FPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGL 85 (557)
T ss_dssp CCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTT
T ss_pred CCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCH
Confidence 3455566778999999999996421 1 10 124677 5799999996422222 12
Q ss_pred HHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 84 EFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 84 ~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
...+.|..+.. -+++.||||+.
T Consensus 86 ~~~~~ln~lg~--Da~tlGNHEfD 107 (557)
T 3c9f_A 86 KSTPIFIKQDY--DLLTIGNHELY 107 (557)
T ss_dssp TTHHHHTTSCC--SEECCCGGGSS
T ss_pred HHHHHHHhcCC--CEEeecchhcc
Confidence 45678888763 37889999985
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-06 Score=85.68 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=43.8
Q ss_pred CCCceEEEEEccCCCCCcc------------------c--------cccCCCCc-EEEEcCCCCCCCCHH---HHHHHHH
Q psy12823 38 DPKKVRVVCMSDTHSLTPH------------------I--------RFNIPDGD-IFIHAGDFTRCGGEE---EVTEFNT 87 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~------------------l--------~~~~~~~D-~viiaGDl~~~g~~~---e~~~~~~ 87 (295)
....++|+++||+|+.... + ..+...++ +++.+||+++..... .-+...+
T Consensus 9 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~ 88 (579)
T 3ztv_A 9 KAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAA 88 (579)
T ss_dssp CCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHH
T ss_pred CceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHH
Confidence 3456999999999976422 1 01122444 889999999843211 1134567
Q ss_pred HHhcCCCCcEEEEcCCCCCC
Q psy12823 88 WIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 88 ~L~~l~~~pv~~V~GNHD~~ 107 (295)
.|..+.. -+++.||||+.
T Consensus 89 ~ln~lg~--D~~tlGNHEfd 106 (579)
T 3ztv_A 89 VMNAGNF--HYFTLGNHEFD 106 (579)
T ss_dssp HHHHHTC--SEEECCSGGGT
T ss_pred HHHhcCc--Ceeeccccccc
Confidence 7777653 46889999974
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.3e-06 Score=84.70 Aligned_cols=68 Identities=21% Similarity=0.292 Sum_probs=45.0
Q ss_pred CCCceEEEEEccCCCCCcc-----------------c--------cccCCCC-cEEEEcCCCCCCCCHHH---HHHHHHH
Q psy12823 38 DPKKVRVVCMSDTHSLTPH-----------------I--------RFNIPDG-DIFIHAGDFTRCGGEEE---VTEFNTW 88 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~-----------------l--------~~~~~~~-D~viiaGDl~~~g~~~e---~~~~~~~ 88 (295)
....++|+++||+|..... + +.+...+ ++++.+||+++...... -+...+.
T Consensus 22 ~~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ 101 (546)
T 4h2g_A 22 DPWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHF 101 (546)
T ss_dssp -CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred CceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHH
Confidence 4567999999999975321 1 0112234 69999999998543221 1456777
Q ss_pred HhcCCCCcEEEEcCCCCCC
Q psy12823 89 IGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 89 L~~l~~~pv~~V~GNHD~~ 107 (295)
|..+.. -+++.||||+.
T Consensus 102 ln~lg~--d~~~~GNHEfd 118 (546)
T 4h2g_A 102 MNALRY--DAMALGNHEFD 118 (546)
T ss_dssp HHHHTC--SEEECCGGGGT
T ss_pred HHhcCC--cEEeccCcccc
Confidence 777753 37899999985
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.34 E-value=9.8e-06 Score=78.13 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=28.0
Q ss_pred CCceEEEEEccCCCCCcc---c-cccCCCCcEEEEcCCCCCC
Q psy12823 39 PKKVRVVCMSDTHSLTPH---I-RFNIPDGDIFIHAGDFTRC 76 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~---l-~~~~~~~D~viiaGDl~~~ 76 (295)
..++||+++||.+..... + .....++|+||++||++..
T Consensus 114 ~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~ 155 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYE 155 (527)
T ss_dssp CCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCC
T ss_pred CCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccC
Confidence 468999999999874221 1 1234689999999999853
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=98.18 E-value=7.9e-07 Score=80.00 Aligned_cols=66 Identities=20% Similarity=0.228 Sum_probs=46.8
Q ss_pred ceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELSF 108 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~~ 108 (295)
.|+|.++||+|+....+. ......|.++++||++++|.... +.+++|.+++ ...++++.||||...
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~--evl~lL~~lk~~~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYRERITILRGNHESRQ 122 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHH--HHHHHHHHHHHHCTTTEEECCCTTSSTT
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChH--HHHHHHHHHHhhCCCcEEEEeCCCCHHH
Confidence 478999999999876541 23346678899999999987432 3444444431 125999999999753
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=98.15 E-value=1.3e-06 Score=79.82 Aligned_cols=67 Identities=22% Similarity=0.217 Sum_probs=46.5
Q ss_pred CCceEEEEEccCCCCCcccc-----ccC--------CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC------CCcEEE
Q psy12823 39 PKKVRVVCMSDTHSLTPHIR-----FNI--------PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP------HKHKLV 99 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~l~-----~~~--------~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~------~~pv~~ 99 (295)
...|||+++||+|+....+. ... ..+|.++++||++++|.... ++++.|.++. ..++++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~--evl~~l~~l~~~~~~~~~~v~~ 145 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN--EVLWFMYQLDQQARDAGGMVHL 145 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH--HHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH--HHHHHHHHHHHHHhhCCCeEEE
Confidence 45799999999999876541 111 25799999999999986432 3334433321 126999
Q ss_pred EcCCCCCC
Q psy12823 100 IAGNHELS 107 (295)
Q Consensus 100 V~GNHD~~ 107 (295)
|.||||..
T Consensus 146 v~GNHE~~ 153 (342)
T 2z72_A 146 LMGNHEQM 153 (342)
T ss_dssp CCCHHHHH
T ss_pred EecCCcHH
Confidence 99999974
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-06 Score=79.68 Aligned_cols=65 Identities=17% Similarity=0.232 Sum_probs=46.3
Q ss_pred ceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
.++|.++||+|+....|. ......|.++++||++++|.... +.+++|..+ ....++++.||||..
T Consensus 56 ~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~--evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 56 EAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--HHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cCceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChH--HHHHHHHHhhhhcCCceEEecCCchHh
Confidence 367999999999876641 23346688999999999987432 344554432 112599999999974
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.9e-05 Score=71.87 Aligned_cols=68 Identities=18% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCCceEEEEEccCCCCCcc-------------c--------cccCCCCc-EEEEcCCCCCCCCH-HHHH-----------
Q psy12823 38 DPKKVRVVCMSDTHSLTPH-------------I--------RFNIPDGD-IFIHAGDFTRCGGE-EEVT----------- 83 (295)
Q Consensus 38 ~~~~mrI~~iSDlH~~~~~-------------l--------~~~~~~~D-~viiaGDl~~~g~~-~e~~----------- 83 (295)
....++|++++|+|+.... + +.+...++ +++-+||+.+ |+. ..+.
T Consensus 5 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q-Gs~~~~~~~~~~~~~g~~~ 83 (339)
T 3jyf_A 5 ATVDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ-GSPLGDYMAAKGLKEGDVH 83 (339)
T ss_dssp CEEEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS-SSHHHHHHHHHCCCTTCCC
T ss_pred cceeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC-CchhHHhhhhcccccccch
Confidence 3457899999999986532 1 01223344 7789999997 443 2221
Q ss_pred HHHHHHhcCCCCcEEEEcCCCCCCC
Q psy12823 84 EFNTWIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 84 ~~~~~L~~l~~~pv~~V~GNHD~~~ 108 (295)
...+.|..+.. -+++.||||+.+
T Consensus 84 p~~~~mn~lg~--D~~t~GNHEfd~ 106 (339)
T 3jyf_A 84 PVYKAMNTLNY--AVGNLGNHEFNY 106 (339)
T ss_dssp HHHHHHTTSCC--SEEECCGGGGTT
T ss_pred HHHHHHHhcCC--CEEecchhhhhc
Confidence 35677777753 367889999853
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=98.10 E-value=2.7e-06 Score=76.51 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=45.5
Q ss_pred CceEEEEEccCCCCCcccc-----ccCC-CCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIP-DGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~-~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
..|||.++||+|+....+. .... ..+.+++.||++++|.... +.++.|..+ ....++++.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChH--HHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 4689999999999976641 1222 3456999999999987432 334444332 112599999999964
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.2e-05 Score=71.49 Aligned_cols=68 Identities=15% Similarity=0.269 Sum_probs=43.0
Q ss_pred CCceEEEEEccCCCCCccc---------------------cccCCCCc-EEEEcCCCCCCCCHHHH--------------
Q psy12823 39 PKKVRVVCMSDTHSLTPHI---------------------RFNIPDGD-IFIHAGDFTRCGGEEEV-------------- 82 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~l---------------------~~~~~~~D-~viiaGDl~~~g~~~e~-------------- 82 (295)
...++|++++|+|+..... +.+...++ +++-+||+++......+
T Consensus 9 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~ 88 (341)
T 3gve_A 9 QVHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTK 88 (341)
T ss_dssp EEEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSS
T ss_pred ceEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhccccccccccc
Confidence 4568999999999865321 01122344 66789999974322221
Q ss_pred -HHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy12823 83 -TEFNTWIGNLPHKHKLVIAGNHELSF 108 (295)
Q Consensus 83 -~~~~~~L~~l~~~pv~~V~GNHD~~~ 108 (295)
....+.|..+.. =.++.||||+.+
T Consensus 89 ~~~~~~~ln~lg~--Da~tlGNHEfd~ 113 (341)
T 3gve_A 89 THPIISVMNALKY--DAGTLGNHEFNY 113 (341)
T ss_dssp CCHHHHHHHHTTC--CBEECCGGGGTT
T ss_pred ccHHHHHHHhhCC--Ceeeccchhhcc
Confidence 135577777753 368899999853
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=6.4e-06 Score=74.65 Aligned_cols=66 Identities=23% Similarity=0.285 Sum_probs=45.6
Q ss_pred CceEEEEEccCCCCCcccc-----ccCC-CCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIP-DGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~-~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
..|||.++||+|+....+. .... .-+.+|+.||++++|.... +.++.|..+ ....++++.||||..
T Consensus 62 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--evl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSC--EVALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHH--HHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChH--HHHHHHHHHhhhCCCcEEEecCchhhh
Confidence 6799999999999987652 1223 3356999999999987432 333433332 112599999999964
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=6.1e-06 Score=73.70 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=44.8
Q ss_pred eEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
++|+++||+|+....+. ......|.+++.||++++|.... +.+++|..+ ....++++.||||..
T Consensus 56 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~--evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 56 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--HHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcH--HHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 46999999999987652 23446678999999999987432 333443322 112699999999964
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.1e-05 Score=73.51 Aligned_cols=65 Identities=22% Similarity=0.254 Sum_probs=45.7
Q ss_pred ceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcC---CCCcEEEEcCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNL---PHKHKLVIAGNHELS 107 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l---~~~pv~~V~GNHD~~ 107 (295)
.++|.++||+|+....+. ......|.+++.||++++|.... +.+.+|..+ ....++++.||||..
T Consensus 69 ~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 69 DAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--ECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHH--HHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChH--HHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 467999999999986642 23456788999999999987432 333443322 112599999999974
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.80 E-value=1.2e-05 Score=76.34 Aligned_cols=66 Identities=21% Similarity=0.252 Sum_probs=46.5
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCC---CCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLP---HKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~---~~pv~~V~GNHD~~ 107 (295)
..|+|.++||+|+....|. ......|.+|+.||++++|.... +++.+|..++ ...++++.||||..
T Consensus 81 l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~--Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 81 IDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--ECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp ECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHH--HHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eccceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHH--HHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 3478999999999887652 12345789999999999997432 3344443321 12599999999974
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00023 Score=67.11 Aligned_cols=86 Identities=14% Similarity=0.020 Sum_probs=55.6
Q ss_pred ceeeeeeec--CCCCCC--CCCCceEEEEEccCCCCCcc-c---------c------------ccCCCCcEEEEcCCCCC
Q psy12823 22 SQKVIKINV--QPPKTQ--VDPKKVRVVCMSDTHSLTPH-I---------R------------FNIPDGDIFIHAGDFTR 75 (295)
Q Consensus 22 ~~~~~~~~~--~~~~~~--~~~~~mrI~~iSDlH~~~~~-l---------~------------~~~~~~D~viiaGDl~~ 75 (295)
.-.|.++.. .|++.+ .....-+|+++||+|.+... . . ....++..||+|||+++
T Consensus 177 ~F~V~di~~Pd~ppq~~~~~~~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~ 256 (476)
T 3e0j_A 177 KFLVEDYCFADLAPQKPAPPLDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLS 256 (476)
T ss_dssp SEEEEEEEECBCCCCCCCCCCSSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBC
T ss_pred eEEEEEEEcCCCCCCCCCCcCCCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccc
Confidence 334555444 333332 23556799999999998752 1 0 01247899999999987
Q ss_pred CCC--------------------HHHHHHHHHHHhcCC-CCcEEEEcCCCCCC
Q psy12823 76 CGG--------------------EEEVTEFNTWIGNLP-HKHKLVIAGNHELS 107 (295)
Q Consensus 76 ~g~--------------------~~e~~~~~~~L~~l~-~~pv~~V~GNHD~~ 107 (295)
... .+.++.+-++|.++. ..||.++|||||..
T Consensus 257 ~~~~~~e~~~~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~ 309 (476)
T 3e0j_A 257 HSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPT 309 (476)
T ss_dssp C-------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSS
T ss_pred cccccchhhhhhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcc
Confidence 521 134456667776653 35899999999975
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00053 Score=65.95 Aligned_cols=66 Identities=18% Similarity=0.267 Sum_probs=42.0
Q ss_pred ceEEEEEccCCCCCcc-----------------c--------cccCCCCc-EEEEcCCCCCCCCHHH---HHHHHHHHhc
Q psy12823 41 KVRVVCMSDTHSLTPH-----------------I--------RFNIPDGD-IFIHAGDFTRCGGEEE---VTEFNTWIGN 91 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~-----------------l--------~~~~~~~D-~viiaGDl~~~g~~~e---~~~~~~~L~~ 91 (295)
.++|++++|+|+.... + +.+..+++ +++-+||+++...... -+...+.|..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 3789999999976431 0 01122444 6677999998432211 1245677777
Q ss_pred CCCCcEEEEcCCCCCCC
Q psy12823 92 LPHKHKLVIAGNHELSF 108 (295)
Q Consensus 92 l~~~pv~~V~GNHD~~~ 108 (295)
+.. =.++.||||+.+
T Consensus 83 lgy--Da~~lGNHEFd~ 97 (530)
T 4h1s_A 83 LRY--DAMALGNHEFDN 97 (530)
T ss_dssp TTC--CEEECCGGGGTT
T ss_pred cCC--CEEEEchhhhcc
Confidence 753 379999999853
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0025 Score=56.18 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=41.6
Q ss_pred CceEEEEEccCCCCCcc--c----c-ccC-CCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPH--I----R-FNI-PDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~--l----~-~~~-~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
..|||+++||+|+.... + . .+. .++|++++-||-...|..- .....+.|..+.. =.+..|||++.
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~-~~~~~~~ln~~G~--Da~TlGNHefD 75 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-SLKHYEFLKEAGV--NYITMGNHTWF 75 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-CHHHHHHHHHHTC--CEEECCTTTTC
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc-CHHHHHHHHhcCC--CEEEEccCccc
Confidence 46999999999975321 1 1 111 2579999999877644211 1245566666653 25777999985
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.011 Score=51.44 Aligned_cols=61 Identities=15% Similarity=0.076 Sum_probs=37.1
Q ss_pred eEEEEEccCCCCCc--cc-----cccCCCCcEEEEcCCCCCCCC-HHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTP--HI-----RFNIPDGDIFIHAGDFTRCGG-EEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~--~l-----~~~~~~~D~viiaGDl~~~g~-~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|||++++|+=+... .+ +.+... |++++-|+-...|. ..+ ...+.|..+.. - .+..|||++.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~--~~~~~l~~~G~-D-a~TlGNHefD 69 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR--DAARGALEAGA-G-CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH--HHHHHHHHHTC-S-EEECCTTTTS
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH--HHHHHHHhCCC-C-EEEecccccc
Confidence 89999999954221 11 112223 99888877665442 111 34566666653 2 5677999985
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.045 Score=47.36 Aligned_cols=60 Identities=22% Similarity=0.287 Sum_probs=34.8
Q ss_pred eEEEEEccCCCCCc--cc-----cccCCCCcEEEEcC-CCCCCCC-HHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 42 VRVVCMSDTHSLTP--HI-----RFNIPDGDIFIHAG-DFTRCGG-EEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 42 mrI~~iSDlH~~~~--~l-----~~~~~~~D~viiaG-Dl~~~g~-~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
|||++++|+=+... .+ +.+... |++++-| |.++ |. .. +...+.|.++.. - .+..|||++.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~-G~g~~--~~~~~~l~~~G~-D-~~T~GNHefD 69 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAAR-GKGLD--RRSYRLLREAGV-D-LVSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTT-TSSCC--HHHHHHHHHHTC-C-EEECCTTTTS
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccC-CCCcC--HHHHHHHHhCCC-C-EEEeccEeeE
Confidence 89999999955332 22 112233 7766655 4444 33 22 244566666653 3 4677999985
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.47 E-value=0.2 Score=47.04 Aligned_cols=69 Identities=12% Similarity=0.201 Sum_probs=47.3
Q ss_pred CCceEEEEEccCCCCCcccc----------ccC-CCCcEEEEcCCCCCCCCH-----------------HHHHHHH----
Q psy12823 39 PKKVRVVCMSDTHSLTPHIR----------FNI-PDGDIFIHAGDFTRCGGE-----------------EEVTEFN---- 86 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~l~----------~~~-~~~D~viiaGDl~~~g~~-----------------~e~~~~~---- 86 (295)
..+++|++.|..+.....+. .+. .+||+||++|.++|.... ..++.++
T Consensus 145 ~~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i 224 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLF 224 (460)
T ss_dssp SSCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHT
T ss_pred CCCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHH
Confidence 47899999999998776541 234 379999999999875321 1222222
Q ss_pred -HHHhcCC-CCcEEEEcCCCCCC
Q psy12823 87 -TWIGNLP-HKHKLVIAGNHELS 107 (295)
Q Consensus 87 -~~L~~l~-~~pv~~V~GNHD~~ 107 (295)
..++++. ...|++|||+||..
T Consensus 225 ~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 225 TPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHhccCCCEEEEeCCccccc
Confidence 3445553 23699999999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 295 | ||||
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 2e-09 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 3e-08 |
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 55.1 bits (131), Expect = 2e-09
Identities = 31/230 (13%), Positives = 71/230 (30%), Gaps = 8/230 (3%)
Query: 42 VRVVCMSDTHSLTPHIRFNIP-----DGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKH 96
+V+ + + + DI + G+ + E+ E P++
Sbjct: 3 RKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRK 62
Query: 97 KLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLT 156
+ ++ + F + + + N+ P R + N+R
Sbjct: 63 VIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHE 122
Query: 157 NCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPI 216
+ E ++ E + E L ++ V I +TPPI
Sbjct: 123 GFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPI 182
Query: 217 GHG--DLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRII 264
G G + T + + + P+ + GHV +G+ + + ++
Sbjct: 183 GEFVDRTPEDPKHHGSAVVNTII-KSLNPEVAIVGHVGKGHELVGNTIVV 231
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 51.3 bits (121), Expect = 3e-08
Identities = 19/228 (8%), Positives = 47/228 (20%), Gaps = 36/228 (15%)
Query: 43 RVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHK 97
++ S+ + D G+ + I + H
Sbjct: 7 YILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPT 66
Query: 98 LVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTN 157
+ G + P R++ + MR+
Sbjct: 67 AYVPGPQ--------------------------DAPIWEYLREAANVELVHPEMRNVHET 100
Query: 158 CTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIG 217
T+ + + +PE + K D +
Sbjct: 101 FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLF----- 155
Query: 218 HGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIF 265
H GL + + + P + + + + ++
Sbjct: 156 HTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKGQKHEMLGASWVVV 203
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 295 | |||
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.91 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.89 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.89 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.77 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.77 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.73 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.68 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.63 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.62 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.55 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.54 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.52 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 99.37 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.32 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.56 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.37 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 98.33 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.58 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 96.76 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 96.74 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 96.44 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 96.22 |
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.91 E-value=1.2e-23 Score=185.01 Aligned_cols=195 Identities=17% Similarity=0.112 Sum_probs=122.4
Q ss_pred eEEEEEccCCCCCcc------------c-------cccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 42 VRVVCMSDTHSLTPH------------I-------RFNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 42 mrI~~iSDlH~~~~~------------l-------~~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
|||++|||+|+.... + .....++|+||++|||++.+..++|+.+.++|++++. |+++|+|
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~~~l~~l~~-p~~~i~G 79 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNY-PLYLIPG 79 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSS-CEEEECC
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCcchhHHHHHHHHhccCC-CEEEEec
Confidence 999999999985421 1 0123589999999999999999999999999999874 9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhh-hccCCeEEccCCcEEEcceEEEeecCCCC
Q psy12823 103 NHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMR-DRLTNCTYLQDEERILYGIKFYGTPWQPE 181 (295)
Q Consensus 103 NHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~L~~~~~~i~gv~i~G~~~~~~ 181 (295)
|||... .+ ++.+. .+. ......... ...++..++++++......
T Consensus 80 NHD~~~--~~--------------------------~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~i~ldt~~~ 124 (271)
T d3d03a1 80 NHDDKA--LF--------------------------LEYLQ------PLCPQLGSDANNM-RCAVDDFATRLLFIDSSRA 124 (271)
T ss_dssp TTSCHH--HH--------------------------HHHHG------GGSGGGCSCGGGC-CEEECSSSSEEEECCCCCT
T ss_pred CccchH--HH--------------------------HHHhh------hhhhccccccCcc-eEEEecCCeEEEecccccC
Confidence 999631 00 00000 000 000000000 1112224567777653211
Q ss_pred -CCCCCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCc-CCCccCcHHHHHHHHhhC-CCcEEEeccccCCCCee
Q psy12823 182 -FCKWAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCC-TGLRAGCVELLTTVQQRV-KPKYHVFGHVHEGYGIT 258 (295)
Q Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~-~~~~~g~~~l~~~l~~~~-~~~~~l~GH~H~~~~~~ 258 (295)
.....+...+.+++.+.+.+.++++.|+++||||........ .....+..++.+.+. ++ ++++++|||+|......
T Consensus 125 ~~~~~~l~~~ql~wL~~~L~~~~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~-~~~~v~~vl~GH~H~~~~~~ 203 (271)
T d3d03a1 125 GTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVE-RFPSLTRIFCGHNHSLTMTQ 203 (271)
T ss_dssp TCSSBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHH-HCTTEEEEEECSSSSCEEEE
T ss_pred CCCcceecHHHHHHHHHHHhhhccceeEEEeccCccccCccccccccccchHHHHHHHH-hcCCeEEEEeCCcchhhceE
Confidence 111122223334455555444567789999999975532211 112345578888884 55 79999999999988777
Q ss_pred ecCcEEEEeCCcCCC
Q psy12823 259 SDGRIIFINASTCDL 273 (295)
Q Consensus 259 ~~g~~~~vn~g~~~~ 273 (295)
..|.+.+++||++..
T Consensus 204 ~~g~~~~~~pst~~~ 218 (271)
T d3d03a1 204 YRQALISTLPGTVHQ 218 (271)
T ss_dssp ETTEEEEECCCSSCB
T ss_pred ECCEEEEEcCCceee
Confidence 777788888888753
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=1.1e-22 Score=172.13 Aligned_cols=194 Identities=10% Similarity=0.038 Sum_probs=123.1
Q ss_pred CCceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCC-HHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC
Q psy12823 39 PKKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGG-EEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTF 112 (295)
Q Consensus 39 ~~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~-~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~ 112 (295)
.+.++|+++||+|++.+.++ ....++|+||++||+++.+. ..++..+.+.|+++. .|+++|+||||.+.....
T Consensus 3 ~~~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~-~pv~~i~GNHD~~~~~~~ 81 (228)
T d1uf3a_ 3 RTVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH-LPTAYVPGPQDAPIWEYL 81 (228)
T ss_dssp CCCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGC-SCEEEECCTTSCSHHHHH
T ss_pred CcccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhcccc-ceEEEEecCCCchhhhhh
Confidence 35689999999999988763 23458999999999998765 567778888888876 499999999996421100
Q ss_pred CCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEE-cceEEEeecCC---CC--CCCCC
Q psy12823 113 THPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERIL-YGIKFYGTPWQ---PE--FCKWA 186 (295)
Q Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i-~gv~i~G~~~~---~~--~~~~~ 186 (295)
.... ................... .++.+.|.... +. ...+.
T Consensus 82 --------------------------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (228)
T d1uf3a_ 82 --------------------------REAA-------NVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEA 128 (228)
T ss_dssp --------------------------HHHH-------HHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSS
T ss_pred --------------------------hhhc-------ccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhh
Confidence 0000 0000122223333332222 34666664321 10 00111
Q ss_pred --cccCchhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEE
Q psy12823 187 --FNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRII 264 (295)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~ 264 (295)
....+.+.+.+.+......+.|+++|+||.+... ...|+..+.+.+ +..++++++|||+|..+ ...|.++
T Consensus 129 ~~~~~~~~~~l~~~l~~~~~~~~il~~H~p~~~~~~-----~~~~~~~~~~~~-~~~~~~lvl~GH~H~~~--~~~g~~~ 200 (228)
T d1uf3a_ 129 LRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGL-----NEQGSHEVAHLI-KTHNPLLVLVAGKGQKH--EMLGASW 200 (228)
T ss_dssp CEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBTTT-----BTTSBHHHHHHH-HHHCCSEEEECCSSCEE--EEETTEE
T ss_pred hhhhHHHHHHHHHHHhhccCCceEEEEeeeccCccc-----cccccHHHHHHH-HhcCCcEEEEcccccch--hccCCEE
Confidence 1111122233344444567889999999975421 246788888888 57899999999999864 4568899
Q ss_pred EEeCCcCCCC
Q psy12823 265 FINASTCDLN 274 (295)
Q Consensus 265 ~vn~g~~~~~ 274 (295)
++|||+...+
T Consensus 201 ~v~pG~~~~g 210 (228)
T d1uf3a_ 201 VVVPGDLSEG 210 (228)
T ss_dssp EEECCBGGGT
T ss_pred EEECCccccc
Confidence 9999988643
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.89 E-value=2.9e-22 Score=172.06 Aligned_cols=197 Identities=20% Similarity=0.228 Sum_probs=120.5
Q ss_pred CceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHH---------------------------HHHHHHH
Q psy12823 40 KKVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEE---------------------------EVTEFNT 87 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~---------------------------e~~~~~~ 87 (295)
++.||+++||+|.....++ ....++|+||++|||++.+... ++..+++
T Consensus 1 ~~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 1 MPRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CCCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 4689999999998776542 2446899999999999865422 3344556
Q ss_pred HHhcCCCCcEEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEE
Q psy12823 88 WIGNLPHKHKLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERI 167 (295)
Q Consensus 88 ~L~~l~~~pv~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~ 167 (295)
.|+++. .|+++|+||||...... ..+. ............+....+.
T Consensus 81 ~L~~~~-~pv~~i~GNHD~~~~~~------------------------------~~~~---~~~~~~~~~~~~~~~~~~~ 126 (257)
T d2yvta1 81 EIGELG-VKTFVVPGKNDAPLKIF------------------------------LRAA---YEAETAYPNIRVLHEGFAG 126 (257)
T ss_dssp HHHTTC-SEEEEECCTTSCCHHHH------------------------------HHHH---HHTTTTCTTEEECSSEEEE
T ss_pred HHHhcC-CcEEEEeCCCcchhhHH------------------------------HHHh---ccccccccccccccceeEE
Confidence 666665 49999999999641100 0000 0000112233444444444
Q ss_pred E-cceEEEeecCCC-CC-CCCCcc--cCch--hhhhhhccCCCCCccEEEecCCCCCCC-CCCc-CCCccCcHHHHHHHH
Q psy12823 168 L-YGIKFYGTPWQP-EF-CKWAFN--VPRG--EACLSKWQDIPADTDVLISHTPPIGHG-DLCC-TGLRAGCVELLTTVQ 238 (295)
Q Consensus 168 i-~gv~i~G~~~~~-~~-~~~~~~--~~~~--~~~~~~~~~~~~~~~IlvtH~pp~~~~-D~~~-~~~~~g~~~l~~~l~ 238 (295)
. +++.+.|.+... .. ..+... .... +.+.....+.+..+.|+++|+||.+.. +... .....|+.++.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l- 205 (257)
T d2yvta1 127 WRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTII- 205 (257)
T ss_dssp ETTTEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHH-
T ss_pred ecCCeEEEEeccccCCccccchhhhhhhhhHHHHHHHHhhhcccccEEEEEccccccccccccccchhhhhhHHHHHhh-
Confidence 4 357777754321 00 011111 1111 112222333445778999999998652 2221 23568888999888
Q ss_pred hhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 239 QRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 239 ~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
++.++++++|||+|.++ ...|.++++|||+...
T Consensus 206 ~~~~~~~~~~GHiH~~~--~~~g~~~~~~pGs~~~ 238 (257)
T d2yvta1 206 KSLNPEVAIVGHVGKGH--ELVGNTIVVNPGEFEE 238 (257)
T ss_dssp HHHCCSEEEECSSCCEE--EEETTEEEEECCBGGG
T ss_pred hhcCCcEEEEEeecCCe--EecCCeEEEECCcccc
Confidence 58899999999999865 4578999999997643
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=8.7e-23 Score=177.51 Aligned_cols=193 Identities=16% Similarity=0.126 Sum_probs=119.6
Q ss_pred CceEEEEEccCCCCCcc------------cc-------ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhc----CCCCc
Q psy12823 40 KKVRVVCMSDTHSLTPH------------IR-------FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGN----LPHKH 96 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~------------l~-------~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~----l~~~p 96 (295)
..|||++|||+|+.... ++ ....+||+||++|||++.|..++++.+.+.+++ ++ .|
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~-~p 81 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLG-AE 81 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHT-CE
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChhHHHHHHHHhhhhhhhcC-CC
Confidence 47999999999985431 11 124589999999999999998888777776653 33 49
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEee
Q psy12823 97 KLVIAGNHELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGT 176 (295)
Q Consensus 97 v~~V~GNHD~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~ 176 (295)
+++|+||||... .+ . +.+....... .-.+...++++.+|++.
T Consensus 82 ~~~v~GNHD~~~--~~------------------------------~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~l 123 (256)
T d2hy1a1 82 LVWVMGNHDDRA--EL------------------------------R-----KFLLDEAPSM-APLDRVCMIDGLRIIVL 123 (256)
T ss_dssp EEECCCTTSCHH--HH------------------------------H-----HHTTCCCCCC-SCCCEEEEETTEEEEEC
T ss_pred EEEEcccccchh--hh------------------------------h-----hhhccccccc-cccceEEEecccceeee
Confidence 999999999420 00 0 0000000000 00123456678888886
Q ss_pred cCCCCCCC-CCcccCchhhhhhhccCCCCCccEEEecCCCCCCCCCC-cCCCccCcHHHHHHHHhhCCCcEEEeccccCC
Q psy12823 177 PWQPEFCK-WAFNVPRGEACLSKWQDIPADTDVLISHTPPIGHGDLC-CTGLRAGCVELLTTVQQRVKPKYHVFGHVHEG 254 (295)
Q Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~-~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~ 254 (295)
........ ..+...+.+++.+.+.+.+++..|+++|+||....... ......+...+.+++ ++.++++++|||+|..
T Consensus 124 dt~~~~~~~g~~~~~~~~wl~~~L~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~-~~~~v~~~~~GH~H~~ 202 (256)
T d2hy1a1 124 DTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVL-RGTDVRAILAGHLHYS 202 (256)
T ss_dssp CCBCTTCSSBCCCHHHHHHHHHHHTSCCTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHH-TTSSEEEEEECSSSSC
T ss_pred eeeecCCcCCcccHHHHHHHHHHHHhhhccCceeeeecCCcccccccccccccccHHHHHHHH-hccCceEEEccccchh
Confidence 42211001 11222334556666665556778999999998653211 111223445666666 6889999999999988
Q ss_pred CCeeecCcEEEEeCCcCC
Q psy12823 255 YGITSDGRIIFINASTCD 272 (295)
Q Consensus 255 ~~~~~~g~~~~vn~g~~~ 272 (295)
......|.+.++++|++.
T Consensus 203 ~~~~~~gi~~~~~~s~~~ 220 (256)
T d2hy1a1 203 TNATFVGIPVSVASATCY 220 (256)
T ss_dssp EEEEETTEEEEECCCCC-
T ss_pred hceEECCEEEEEcCCccc
Confidence 766667777777878764
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.77 E-value=6.9e-19 Score=143.18 Aligned_cols=152 Identities=22% Similarity=0.269 Sum_probs=96.4
Q ss_pred eEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHPL 116 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~~ 116 (295)
|||+++||+|++...++ .+..++|.|+++||++.. ...+.+.++. .|+++|.||||.+...
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~-------~~~~~l~~~~-~~~~~v~GN~D~~~~~------ 66 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------FVIKEFENLN-ANIIATYGNNDGERCK------ 66 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------HHHHHGGGCS-SEEEEECCTTCCCHHH------
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH-------HHHHHHhhcC-ccEEEEcccccccchh------
Confidence 99999999999877652 245689999999999863 3456666665 4899999999964110
Q ss_pred CCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhhh
Q psy12823 117 SSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEACL 196 (295)
Q Consensus 117 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~~ 196 (295)
+. ....... ....+ .. ...
T Consensus 67 -------------------------~~-----~~~~~~~-~~~~~-------------~~---------~~~-------- 85 (165)
T d1s3la_ 67 -------------------------LK-----EWLKDIN-EENII-------------DD---------FIS-------- 85 (165)
T ss_dssp -------------------------HH-----HHHHHHC-TTCEE-------------ES---------EEE--------
T ss_pred -------------------------hh-----Hhhhhhc-ccccC-------------Ch---------hhc--------
Confidence 00 0000000 00000 00 000
Q ss_pred hhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCC
Q psy12823 197 SKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYL 276 (295)
Q Consensus 197 ~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~ 276 (295)
.. .++.+|+++|.+|.. ..+.+.+..++++++|||+|.+. ....++++++|||+++..+.
T Consensus 86 ---~~-~~~~~i~l~Hg~~~~---------------~~~~~~~~~~~d~v~~GHtH~~~-~~~~~~~~~iNPGSvg~p~~ 145 (165)
T d1s3la_ 86 ---VE-IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERV-FEEVDDVLVINPGECCGYLT 145 (165)
T ss_dssp ---EE-ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCE-EEEETTEEEEECCCSSCTTT
T ss_pred ---eE-ECCcEEEEEECCccc---------------HHHHHhhcCCCCEEEECCcCcce-EEEECCEEEEECCCCCCCCC
Confidence 00 145789999998641 22233357899999999999977 45678899999999975443
Q ss_pred CCCCCEEEEecCCC
Q psy12823 277 PTNPPIVFDIALPP 290 (295)
Q Consensus 277 ~~~~~~~~~~~~~~ 290 (295)
..|....++...
T Consensus 146 --~~~s~~ild~~~ 157 (165)
T d1s3la_ 146 --GIPTIGILDTEK 157 (165)
T ss_dssp --SCCEEEEEETTT
T ss_pred --CCCEEEEEEccC
Confidence 345554444443
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=3.2e-18 Score=141.54 Aligned_cols=131 Identities=11% Similarity=0.152 Sum_probs=90.0
Q ss_pred eEEEEEccCCCCCcc--c-----c-ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCC
Q psy12823 42 VRVVCMSDTHSLTPH--I-----R-FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFT 113 (295)
Q Consensus 42 mrI~~iSDlH~~~~~--l-----~-~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~ 113 (295)
|||++|||+|++... + + .+..++|.|+++||++. .+.+++|+++.. ++++|.||||......
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~-------~e~l~~l~~~~~-~v~~V~GN~D~~~~~p-- 70 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------KESYDYLKTLAG-DVHIVRGDFDENLNYP-- 70 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------HHHHHHHHHHCS-EEEECCCTTCCCTTSC--
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc-------hhhHHHHHhhCC-ceEEEeCCcCcccccc--
Confidence 999999999986543 2 1 23457999999999975 256677877653 7999999999641100
Q ss_pred CCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchh
Q psy12823 114 HPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGE 193 (295)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~ 193 (295)
... .+++
T Consensus 71 -------------------------------------------~~~-----~~~~------------------------- 77 (182)
T d1z2wa1 71 -------------------------------------------EQK-----VVTV------------------------- 77 (182)
T ss_dssp -------------------------------------------SEE-----EEEE-------------------------
T ss_pred -------------------------------------------eEE-----EEEE-------------------------
Confidence 000 0000
Q ss_pred hhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCC
Q psy12823 194 ACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDL 273 (295)
Q Consensus 194 ~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~ 273 (295)
++..++++|.++.... .....+.+.. +..++++++|||+|.+. ....++++++|||+++.
T Consensus 78 ----------~g~~i~~~Hg~~~~~~--------~~~~~l~~~~-~~~~~divi~GHTH~p~-~~~~~~~~~iNPGSv~~ 137 (182)
T d1z2wa1 78 ----------GQFKIGLIHGHQVIPW--------GDMASLALLQ-RQFDVDILISGHTHKFE-AFEHENKFYINPGSATG 137 (182)
T ss_dssp ----------TTEEEEEECSCCCCBT--------TCHHHHHHHH-HHHSSSEEECCSSCCCE-EEEETTEEEEECCCTTC
T ss_pred ----------cCcEEEEEeCCCCCCC--------CCHHHHHHHH-hccCCCEEEECCcCcce-EEEECCEEEEeCCCCCC
Confidence 2456889998865321 1223444444 46789999999999986 45678999999999976
Q ss_pred CC
Q psy12823 274 NY 275 (295)
Q Consensus 274 ~~ 275 (295)
++
T Consensus 138 pr 139 (182)
T d1z2wa1 138 AY 139 (182)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.73 E-value=3.3e-17 Score=136.61 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=93.5
Q ss_pred EEEEEccCCCCCcccc--------ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR--------FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTH 114 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~--------~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~ 114 (295)
-|++|||+|++...+. ....++|.|+++||+++. +.+++|+++. .++++|+||||.+.....
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~-------~~l~~l~~l~-~~v~~V~GN~D~~~~~~~-- 74 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------EYVEMLKNIT-KNVYIVSGDLDSAIFNPD-- 74 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------HHHHHHHHHC-SCEEECCCTTCCSCCBCC--
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH-------HHHHHHHhhC-CCEEEEcCCCCcchhhhh--
Confidence 3899999998654321 134689999999999862 5677787765 379999999997532110
Q ss_pred CCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhh
Q psy12823 115 PLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEA 194 (295)
Q Consensus 115 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~ 194 (295)
..+........ .+
T Consensus 75 ----------------------------------~~~~~~lp~~~-----~~---------------------------- 87 (193)
T d2a22a1 75 ----------------------------------PESNGVFPEYV-----VV---------------------------- 87 (193)
T ss_dssp ----------------------------------GGGTBCCCSEE-----EE----------------------------
T ss_pred ----------------------------------HHHHhhCCccE-----EE----------------------------
Confidence 00000000000 00
Q ss_pred hhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCC
Q psy12823 195 CLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLN 274 (295)
Q Consensus 195 ~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~ 274 (295)
.+ ++.+|+++|..+.... .....+.+.+ ...++++++|||+|.+.. ...++++++|||+++.+
T Consensus 88 ------~~-~~~~i~l~H~~~~~~~--------~~~~~l~~~~-~~~~~dvvi~GHTH~~~~-~~~~g~~~iNPGSvg~p 150 (193)
T d2a22a1 88 ------QI-GEFKIGLMHGNQVLPW--------DDPGSLEQWQ-RRLDCDILVTGHTHKLRV-FEKNGKLFLNPGTATGA 150 (193)
T ss_dssp ------EE-TTEEEEEECSTTSSST--------TCHHHHHHHH-HHHTCSEEEECSSCCCEE-EEETTEEEEECCCSSCC
T ss_pred ------EE-CCEEEEEEeccCCCCC--------CCHHHHHHHH-hhcCCCEEEEcCccCceE-EEECCEEEEECCCCCcC
Confidence 00 3567889987754221 1123444444 577899999999999874 56788999999999764
Q ss_pred C---CCCCCCEE
Q psy12823 275 Y---LPTNPPIV 283 (295)
Q Consensus 275 ~---~~~~~~~~ 283 (295)
+ +...+|..
T Consensus 151 r~~~~~~~~~sy 162 (193)
T d2a22a1 151 FSALTPDAPPSF 162 (193)
T ss_dssp CCTTSTTCCCEE
T ss_pred cCCCCCCCCCEE
Confidence 3 44455553
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.68 E-value=1e-16 Score=131.24 Aligned_cols=137 Identities=18% Similarity=0.171 Sum_probs=92.8
Q ss_pred CceEEEEEccCCCCCcccc----ccCCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCCC
Q psy12823 40 KKVRVVCMSDTHSLTPHIR----FNIPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELSFDPTFTHP 115 (295)
Q Consensus 40 ~~mrI~~iSDlH~~~~~l~----~~~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~~~~~~~~~ 115 (295)
..|||+++||+|++...++ ....++|+|+++||+........ . .++.+|.||||.....
T Consensus 2 ~~~kI~viSD~Hgn~~al~~vl~~~~~~~D~iih~GD~~~~~~~~~-----------~-~~~~~V~GN~D~~~~~----- 64 (173)
T d3ck2a1 2 AKQTIIVMSDSHGDSLIVEEVRDRYVGKVDAVFHNGDSELRPDSPL-----------W-EGIRVVKGNMDFYAGY----- 64 (173)
T ss_dssp CCEEEEEECCCTTCHHHHHHHHHHHTTTSSEEEECSCCCSCTTCGG-----------G-TTEEECCCTTCCSTTC-----
T ss_pred CCCEEEEEeccCCCHHHHHHHHHHhhcCCCEEEECCcccCcccchh-----------h-cCCeEEecCccccccc-----
Confidence 3589999999999876652 12457999999999876543211 1 3789999999964100
Q ss_pred CCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCCCCcccCchhhh
Q psy12823 116 LSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCKWAFNVPRGEAC 195 (295)
Q Consensus 116 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~~~~~~~~~~~~ 195 (295)
.... .+++
T Consensus 65 ----------------------------------------~~~~-----~~~~--------------------------- 72 (173)
T d3ck2a1 65 ----------------------------------------PERL-----VTEL--------------------------- 72 (173)
T ss_dssp ----------------------------------------CSEE-----EEEE---------------------------
T ss_pred ----------------------------------------ceEE-----EEEE---------------------------
Confidence 0000 0000
Q ss_pred hhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCC
Q psy12823 196 LSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNY 275 (295)
Q Consensus 196 ~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~ 275 (295)
++..++++|..+.... .+...+.... ...++++++|||+|.+.. ...++++++|||+++.+.
T Consensus 73 --------~~~~~~~~Hg~~~~~~--------~~~~~l~~~~-~~~~~dvvi~GHTH~p~~-~~~~~~~~iNPGSvg~pr 134 (173)
T d3ck2a1 73 --------GSTKIIQTHGHLFDIN--------FNFQKLDYWA-QEEEAAICLYGHLHVPSA-WLEGKILFLNPGSISQPR 134 (173)
T ss_dssp --------TTEEEEEECSGGGTTT--------TCSHHHHHHH-HHTTCSEEECCSSCCEEE-EEETTEEEEEECCSSSCC
T ss_pred --------CCEEEEEEeCcCCCCC--------CCHHHHHHHH-HhcCCCEEEeCCcCcceE-EEECCEEEEECCCCCCCC
Confidence 2456888998875431 2224566555 478899999999999874 567889999999998765
Q ss_pred CCCCCCEE
Q psy12823 276 LPTNPPIV 283 (295)
Q Consensus 276 ~~~~~~~~ 283 (295)
....++..
T Consensus 135 ~~~~~~sy 142 (173)
T d3ck2a1 135 GTIRECLY 142 (173)
T ss_dssp TTCCSCCE
T ss_pred CCCCCCEE
Confidence 55555443
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.63 E-value=1.7e-16 Score=135.55 Aligned_cols=77 Identities=5% Similarity=-0.140 Sum_probs=49.9
Q ss_pred CCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcCCCCCCCCCCCE
Q psy12823 204 ADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTCDLNYLPTNPPI 282 (295)
Q Consensus 204 ~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~~~~~~~~~~~~ 282 (295)
.+.+++++|++|....+... ............+....+.++++|||+|.+.. ...+++.++|+|+++........+.
T Consensus 129 ~~~~~~~~H~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~-~~~~~~~~in~Gsvg~~~~g~~~~~ 205 (251)
T d1nnwa_ 129 GGNEVFGVYGSPINPFDGEV-LAEQPTSYYEAIMRPVKDYEMLIVASPMYPVD-AMTRYGRVVCPGSVGFPPGKEHKAT 205 (251)
T ss_dssp TTEEEEEESSCSSCTTTCCC-CSSCCHHHHHHHHGGGTTSSEEEESTTCSEEE-EEETTEEEEEECCSSSCSSSSCCEE
T ss_pred CCCcEEEEecCccCcccchh-hhhhHHHHHhhhcccccCceEEEEeccceEEE-EEeeeeeccccccccccCCCCCCCe
Confidence 35789999999975543321 11122223333332345689999999999774 4567789999999987655554443
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=6.6e-16 Score=126.79 Aligned_cols=66 Identities=17% Similarity=0.313 Sum_probs=50.2
Q ss_pred ceEEEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCH------HHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 41 KVRVVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGE------EEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~------~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
+|||+++||+|++...++ .+..++|.||++||+++.+.. ......++.+.++.. ++++|.||||..
T Consensus 1 mMki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~GNhD~~ 77 (184)
T d1su1a_ 1 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAH-KVIAVRGNCDSE 77 (184)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGG-GEEECCCTTCCH
T ss_pred CcEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCC-cEEEecCCCCch
Confidence 599999999998776542 234589999999999987542 122356777777764 899999999963
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.55 E-value=3.8e-15 Score=131.82 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=46.6
Q ss_pred eEEEEEccCCCCCccc------------------cccCCCCcEEEEcCCCCCCCC--HHHHHHHHHHH---hcCCCCcEE
Q psy12823 42 VRVVCMSDTHSLTPHI------------------RFNIPDGDIFIHAGDFTRCGG--EEEVTEFNTWI---GNLPHKHKL 98 (295)
Q Consensus 42 mrI~~iSDlH~~~~~l------------------~~~~~~~D~viiaGDl~~~g~--~~e~~~~~~~L---~~l~~~pv~ 98 (295)
|||+|+||+|++.... .....++|+||++||+++.+. .+....+.+.+ .... .||+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~-i~v~ 79 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHS-IPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTT-CCEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcC-CcEE
Confidence 8999999999865421 013468999999999998754 33344444444 4433 4899
Q ss_pred EEcCCCCCC
Q psy12823 99 VIAGNHELS 107 (295)
Q Consensus 99 ~V~GNHD~~ 107 (295)
+|+||||.+
T Consensus 80 ~i~GNHD~~ 88 (333)
T d1ii7a_ 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCCCccc
Confidence 999999975
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.54 E-value=2.4e-14 Score=127.58 Aligned_cols=190 Identities=11% Similarity=0.011 Sum_probs=98.5
Q ss_pred CCCCceEEEEEccCCCCCccc------cccCCCCcEEEEcCCCCC-CC----CHHHHHHHHHHHhcCC-CCcEEEEcCCC
Q psy12823 37 VDPKKVRVVCMSDTHSLTPHI------RFNIPDGDIFIHAGDFTR-CG----GEEEVTEFNTWIGNLP-HKHKLVIAGNH 104 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~l------~~~~~~~D~viiaGDl~~-~g----~~~e~~~~~~~L~~l~-~~pv~~V~GNH 104 (295)
....++|+++++|++...... .....++|+||++||++. .+ ...++..+++.++.+. ..|++.++|||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNH 82 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNH 82 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecccc
Confidence 456789999999998654321 234568999999999973 12 1234444555555432 24999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccCCCCCCCchhhHHHHHhhhhhhccCCeEEccCCcEEEcceEEEeecCCCCCCC
Q psy12823 105 ELSFDPTFTHPLSSCRSPSRTMHLINEIPTLGLPRDSLTEAVKARNMRDRLTNCTYLQDEERILYGIKFYGTPWQPEFCK 184 (295)
Q Consensus 105 D~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~~~~~i~gv~i~G~~~~~~~~~ 184 (295)
|......... . +........+..+........+. .-+++++++.|+++.... .
T Consensus 83 D~~~~~~~~~----------~----------~~~~~~~~~f~~P~~~~~~~~~~----~Ysf~~g~v~fi~Lds~~---~ 135 (312)
T d2qfra2 83 EIEFAPEINE----------T----------EPFKPFSYRYHVPYEASQSTSPF----WYSIKRASAHIIVLSSYS---A 135 (312)
T ss_dssp GTCCBGGGTB----------C----------STTHHHHHHCCCCGGGGTCSSTT----SEEEEETTEEEEECCTTS---C
T ss_pred cccccccccc----------c----------ccccchhhhccCCccccCCCCCc----eEEEEECCEEEEEeeccc---c
Confidence 9743211000 0 00000000000000000000000 114667788898876321 1
Q ss_pred CCcccCchhhhhhhccCCCC---CccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCC
Q psy12823 185 WAFNVPRGEACLSKWQDIPA---DTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEG 254 (295)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~---~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~ 254 (295)
+.....+.+++.+.+++... ...|++.|+|++...+............+.+++ .+++++++++||.|..
T Consensus 136 ~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~-~~~~Vdlv~~GH~H~Y 207 (312)
T d2qfra2 136 YGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWF-VKYKVDVVFAGHVHAY 207 (312)
T ss_dssp CSTTSHHHHHHHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHH-HHTTCSEEEECSSSSE
T ss_pred ccchHHHHHHHHHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHH-HHcCcEEEEEccCcce
Confidence 11112234455554543321 236888999987543221000000112455556 5899999999999963
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.52 E-value=3.3e-14 Score=123.60 Aligned_cols=66 Identities=11% Similarity=0.123 Sum_probs=48.9
Q ss_pred ceEEEEEccCCCCCcc-------------------c-----cccCCCCcEEEEcCCCCCCCC------HHHHHHHHHHHh
Q psy12823 41 KVRVVCMSDTHSLTPH-------------------I-----RFNIPDGDIFIHAGDFTRCGG------EEEVTEFNTWIG 90 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~-------------------l-----~~~~~~~D~viiaGDl~~~g~------~~e~~~~~~~L~ 90 (295)
.+||++|||+|..... + ..+..++|+||++||+++.+. ...++.+.+.++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 4899999999975310 0 013578999999999997542 234556777777
Q ss_pred cCCCCcEEEEcCCCCCC
Q psy12823 91 NLPHKHKLVIAGNHELS 107 (295)
Q Consensus 91 ~l~~~pv~~V~GNHD~~ 107 (295)
++. .|+++++||||.+
T Consensus 83 ~~~-~p~~~v~GNHD~~ 98 (320)
T d2nxfa1 83 ACS-VDVHHVWGNHEFY 98 (320)
T ss_dssp TTC-SEEEECCCHHHHH
T ss_pred HcC-CCEEEecccCccc
Confidence 776 4999999999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.37 E-value=2.3e-12 Score=106.33 Aligned_cols=60 Identities=30% Similarity=0.425 Sum_probs=43.6
Q ss_pred EEEEccCCCCCccc--------------------cccCCCCcEEEEcCCCCCCC-CHHHHHHHHHHHhcCCCCcEEEEcC
Q psy12823 44 VVCMSDTHSLTPHI--------------------RFNIPDGDIFIHAGDFTRCG-GEEEVTEFNTWIGNLPHKHKLVIAG 102 (295)
Q Consensus 44 I~~iSDlH~~~~~l--------------------~~~~~~~D~viiaGDl~~~g-~~~e~~~~~~~L~~l~~~pv~~V~G 102 (295)
|.++||+|++...+ .....+.|.|+++||++... ..+ ++.++|++++. .+++|.|
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~---~~~~~l~~L~g-~~~lI~G 79 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKN---EYLRIWKALPG-RKILVMG 79 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTT---SHHHHHHHSSS-EEEEECC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHH---HHHHHHHHCCC-ceEEEec
Confidence 56799999976532 01235789999999998532 223 45678888876 6799999
Q ss_pred CCCCC
Q psy12823 103 NHELS 107 (295)
Q Consensus 103 NHD~~ 107 (295)
|||..
T Consensus 80 NHD~~ 84 (188)
T d1xm7a_ 80 NHDKD 84 (188)
T ss_dssp TTCCC
T ss_pred CCCch
Confidence 99964
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.32 E-value=8.5e-13 Score=115.00 Aligned_cols=78 Identities=13% Similarity=0.064 Sum_probs=47.0
Q ss_pred hhhhhhhccCCCCCccEEEecCCCCCCCCCCcCCCccCcHHHHHHHHhhCCCcEEEeccccCCCCeeecCcEEEEeCCcC
Q psy12823 192 GEACLSKWQDIPADTDVLISHTPPIGHGDLCCTGLRAGCVELLTTVQQRVKPKYHVFGHVHEGYGITSDGRIIFINASTC 271 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~IlvtH~pp~~~~D~~~~~~~~g~~~l~~~l~~~~~~~~~l~GH~H~~~~~~~~g~~~~vn~g~~ 271 (295)
.+++.+.+++...+..|+++|+|++...... ........+.+++ +++++++++|||.|........+++.++..|++
T Consensus 164 ~~WL~~~L~~~~~~~~iv~~h~~~~~~~~~~--~~~~~~~~~~~ll-~~~~v~~~~~GH~H~~~r~~~~~~~~~i~~g~g 240 (302)
T d1utea_ 164 LAWIKKQLAAAKEDYVLVAGHYPVWSIAEHG--PTHCLVKQLLPLL-TTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAG 240 (302)
T ss_dssp HHHHHHHHHHCCCSEEEEECSSCSSCCSSSC--CCHHHHHHTHHHH-HHTTCSEEEECSSSSEEEEECTTCCEEEEECBS
T ss_pred HHHHHHHHHhhccCceEEEEeccccccCCCC--CchhhhhhhhHHH-HhcCceEEEeCCCcceEEEecCCccEEEEeCCC
Confidence 3445555555455678999999997542211 0011113455555 688999999999997543334455566655555
Q ss_pred C
Q psy12823 272 D 272 (295)
Q Consensus 272 ~ 272 (295)
+
T Consensus 241 ~ 241 (302)
T d1utea_ 241 N 241 (302)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.56 E-value=6.4e-07 Score=79.42 Aligned_cols=64 Identities=22% Similarity=0.321 Sum_probs=41.0
Q ss_pred ceEEEEEccCCCCCcc-------c----------c--ccCCCCcEEEE-cCCCCCCCCHH----HHHHHHHHHhcCCCCc
Q psy12823 41 KVRVVCMSDTHSLTPH-------I----------R--FNIPDGDIFIH-AGDFTRCGGEE----EVTEFNTWIGNLPHKH 96 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~-------l----------~--~~~~~~D~vii-aGDl~~~g~~~----e~~~~~~~L~~l~~~p 96 (295)
.++|++++|+|+.... + + ....+++.+++ +||++. |+.. .-+...+++..++.
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~-gs~~s~~~~g~~~~~~mn~~g~-- 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINT-GVPESDLQDAEPDFRGMNLVGY-- 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSS-SCHHHHTTTTHHHHHHHHHHTC--
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcc-cCHHHHHhCChHHHHHHHhcCC--
Confidence 5899999999975421 1 0 11245665555 999986 4431 12345677777753
Q ss_pred EEEEcCCCCCC
Q psy12823 97 KLVIAGNHELS 107 (295)
Q Consensus 97 v~~V~GNHD~~ 107 (295)
-.++.||||+.
T Consensus 85 Da~~~GNHEfd 95 (337)
T d1usha2 85 DAMAIGNHEFD 95 (337)
T ss_dssp CEEECCGGGGS
T ss_pred eEEEechhhhc
Confidence 36888999985
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.37 E-value=1.1e-06 Score=77.29 Aligned_cols=69 Identities=23% Similarity=0.311 Sum_probs=44.3
Q ss_pred CCCCceEEEEEccCCCCCcc-------------c-------c--ccCCCCcE-EEEcCCCCCCCCHHHH-----HHHHHH
Q psy12823 37 VDPKKVRVVCMSDTHSLTPH-------------I-------R--FNIPDGDI-FIHAGDFTRCGGEEEV-----TEFNTW 88 (295)
Q Consensus 37 ~~~~~mrI~~iSDlH~~~~~-------------l-------~--~~~~~~D~-viiaGDl~~~g~~~e~-----~~~~~~ 88 (295)
-....++|++++|+|+.... + + .+...+|. ++-+||+.+......+ ....+.
T Consensus 7 l~~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~ 86 (322)
T d3c9fa2 7 LTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPI 86 (322)
T ss_dssp CCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHH
T ss_pred CCcCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHH
Confidence 34457999999999985421 1 0 12345675 4569999984322211 245677
Q ss_pred HhcCCCCcEEEEcCCCCCC
Q psy12823 89 IGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 89 L~~l~~~pv~~V~GNHD~~ 107 (295)
+..++. -.++.||||+.
T Consensus 87 mn~lgy--Da~t~GNHEfd 103 (322)
T d3c9fa2 87 FIKQDY--DLLTIGNHELY 103 (322)
T ss_dssp HTTSCC--SEECCCGGGSS
T ss_pred HhccCC--cEEeecceecc
Confidence 777753 47899999985
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=98.33 E-value=6.4e-08 Score=80.30 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=46.3
Q ss_pred EEEEEccCCCCCcccc-----cc-CCCCcEEEEcCCCCCCCCHHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHIR-----FN-IPDGDIFIHAGDFTRCGGEEEVTEFNTWIGNLPHKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l~-----~~-~~~~D~viiaGDl~~~g~~~e~~~~~~~L~~l~~~pv~~V~GNHD~~ 107 (295)
||.+|||+|++...|. .. ....|.+++.||++++|.... +++++|.+. .+.+|.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~--~vl~~l~~~---~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV--ECLELITFP---WFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH--HHHGGGGST---TEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHH--HHHHHhhcc---ccccccCcHHHH
Confidence 7999999999987652 22 246799999999999997543 556666543 589999999964
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.58 E-value=0.0004 Score=59.86 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=41.9
Q ss_pred ceEEEEEccCCCCCcc--------------c-------c-ccC-CCCcEEEEcCCCCCCCCHHH---HHHHHHHHhcCCC
Q psy12823 41 KVRVVCMSDTHSLTPH--------------I-------R-FNI-PDGDIFIHAGDFTRCGGEEE---VTEFNTWIGNLPH 94 (295)
Q Consensus 41 ~mrI~~iSDlH~~~~~--------------l-------~-~~~-~~~D~viiaGDl~~~g~~~e---~~~~~~~L~~l~~ 94 (295)
.++|++++|+|+.... + + .+. ..--+++-+||++....... -+...+.+..+..
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n~~gy 81 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRY 81 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTTC
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhHhhhcchhHHHHHHhccc
Confidence 3689999999986521 1 0 111 12357888999987432111 1345567777753
Q ss_pred CcEEEEcCCCCCCC
Q psy12823 95 KHKLVIAGNHELSF 108 (295)
Q Consensus 95 ~pv~~V~GNHD~~~ 108 (295)
-.+++||||+.+
T Consensus 82 --Da~~~GNHEfd~ 93 (302)
T d2z1aa2 82 --RAMALGNHEFDL 93 (302)
T ss_dssp --CEEECCGGGGTT
T ss_pred --ccccccchhhhc
Confidence 489999999854
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0015 Score=55.74 Aligned_cols=81 Identities=19% Similarity=0.238 Sum_probs=52.4
Q ss_pred HHHHhhccceeeeeeecCCCCCCCCCCceEEEEEccCCCCCccc----c-ccCCCCcEEEEcCCCCCCCCHH-HHHHHHH
Q psy12823 14 AAWKELSGSQKVIKINVQPPKTQVDPKKVRVVCMSDTHSLTPHI----R-FNIPDGDIFIHAGDFTRCGGEE-EVTEFNT 87 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~mrI~~iSDlH~~~~~l----~-~~~~~~D~viiaGDl~~~g~~~-e~~~~~~ 87 (295)
.+-+.++.+..+.+++. .+.+++|+|+....+ + ...+.-.-.++.||.+|+|... |...++=
T Consensus 29 ~a~~il~~e~~l~~i~~------------pv~VvGDlHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slEvl~lL~ 96 (288)
T d3c5wc1 29 KAKEILTKESNVQEVRC------------PVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLV 96 (288)
T ss_dssp HHHHHHHTSCSEEEECS------------SEEEECBCTTCHHHHHHHHHHHCCTTTSCEEECSCCCCSSSSHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCC------------CeEEEeeCCCCHHHHHHHHHhcCCCccceEEecCcccCCCCcceeHHHHHH
Confidence 35667777777777631 299999999998764 1 1223334578899999999743 2212222
Q ss_pred HHh-cCCCCcEEEEcCCCCCC
Q psy12823 88 WIG-NLPHKHKLVIAGNHELS 107 (295)
Q Consensus 88 ~L~-~l~~~pv~~V~GNHD~~ 107 (295)
.|+ ..+ ..|+.+.||||..
T Consensus 97 alKi~~P-~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 97 ALKVRYR-ERITILRGNHESR 116 (288)
T ss_dssp HHHHHCT-TTEEECCCTTSSH
T ss_pred HHHhhCC-CeEEEeccCCccc
Confidence 222 223 2699999999974
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0014 Score=56.82 Aligned_cols=64 Identities=27% Similarity=0.383 Sum_probs=41.0
Q ss_pred EEEEEccCCCCCccc-c----ccCC-CCcEEEEcCCCCCCCCHH-HHHHHHHHHhc-CCCCcEEEEcCCCCCC
Q psy12823 43 RVVCMSDTHSLTPHI-R----FNIP-DGDIFIHAGDFTRCGGEE-EVTEFNTWIGN-LPHKHKLVIAGNHELS 107 (295)
Q Consensus 43 rI~~iSDlH~~~~~l-~----~~~~-~~D~viiaGDl~~~g~~~-e~~~~~~~L~~-l~~~pv~~V~GNHD~~ 107 (295)
.|.+++|+|+....| + ...+ .-.-.|+.||++|+|... |...++=.|+- .+ ..|+++.||||..
T Consensus 61 pv~VvGDiHGq~~DL~~if~~~g~p~~~~~ylFLGDYVDRG~~slEvi~lL~~lKi~yP-~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 61 KITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYP-DHFHLLRGNHETD 132 (324)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHST-TTEEEECCTTSSH
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCCCeEEEecccccCcCcceeehHHHHHHHHhCC-CcEEeccCCcccc
Confidence 589999999998764 1 1122 223478999999999743 21112222222 23 2699999999973
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=96.44 E-value=0.0016 Score=55.65 Aligned_cols=63 Identities=19% Similarity=0.282 Sum_probs=41.2
Q ss_pred EEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHH-HHHHHHHHHhc-CCCCcEEEEcCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEE-EVTEFNTWIGN-LPHKHKLVIAGNHELS 107 (295)
Q Consensus 44 I~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~-e~~~~~~~L~~-l~~~pv~~V~GNHD~~ 107 (295)
+.+++|+|+....+. ...+...-.++.||.+|+|... |...++=.|+- .+ ..|+++.||||..
T Consensus 54 v~VvGDiHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slE~i~lL~aLKi~~P-~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHST-TTEEECCCTTSSH
T ss_pred eEEEEECCCChHhHHHHHhhcCCCccceEEeeccccCCCccchHHHHHHHHHHhhCC-CeEEEecCCcccc
Confidence 899999999987641 1233344578899999998743 21112222222 23 3699999999974
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.0019 Score=58.50 Aligned_cols=63 Identities=22% Similarity=0.281 Sum_probs=40.7
Q ss_pred EEEEccCCCCCcccc-----ccCCCCcEEEEcCCCCCCCCHH-HHHHHHHHHhc-CCCCcEEEEcCCCCCC
Q psy12823 44 VVCMSDTHSLTPHIR-----FNIPDGDIFIHAGDFTRCGGEE-EVTEFNTWIGN-LPHKHKLVIAGNHELS 107 (295)
Q Consensus 44 I~~iSDlH~~~~~l~-----~~~~~~D~viiaGDl~~~g~~~-e~~~~~~~L~~-l~~~pv~~V~GNHD~~ 107 (295)
+.+++|+|+....|. ...+.-.-.|+.||++|+|... |...++-.|+- .+ ..|+++.||||..
T Consensus 72 v~VvGDIHGq~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~SlEvlllL~aLKi~yP-~~V~LLRGNHE~~ 141 (473)
T d1auia_ 72 VTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYP-KTLFLLRGNHECR 141 (473)
T ss_dssp EEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHST-TTEEECCCTTSSH
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCcceEEecCccccCCcccHHHHHHHHHHHHhCC-CeEEEeCCCCccH
Confidence 899999999987641 1222333467899999999743 22222222232 23 2699999999963
|