Psyllid ID: psy12866

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
Protein Sequence
METREGSSTSGGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccc
Coil and Loop (DISEMBL)
metregsstsggwFRLFTALEEFAAkdadrrtdgylflNSLNFQIGTSLVYLFIVLYagprfmanrkpfklEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Flexible Loop (DISEMBL)
metregsstsggwfRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Low Complexity Region (SEG)
METREGSSTSGGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Disordered region (IsUnstruct)
***********GWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSL*****
Disordered Region (DISOPRED)
***********GWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Disordered Region (DISEMBL)
**********GGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Disordered Region (DISPRO)
********TSGGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSIS**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
METREGSSTSGGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFFVSLSISPN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	106	2.2.26 [Sep-21-2011]
Q9BW60	279	Elongation of very long c	yes	N/A	0.688	0.261	0.369	1e-06
Q1HRV8	358	Elongation of very long c	N/A	N/A	0.716	0.212	0.328	2e-06
Q9D2Y9	281	Elongation of very long c	yes	N/A	0.632	0.238	0.373	8e-06
Q9JLJ5	279	Elongation of very long c	no	N/A	0.632	0.240	0.358	9e-06
D4ADY9	281	Elongation of very long c	yes	N/A	0.632	0.238	0.358	2e-05
A1L3X0	281	Elongation of very long c	no	N/A	0.632	0.238	0.358	4e-05
A0JNC4	281	Elongation of very long c	no	N/A	0.632	0.238	0.343	0.0004

>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 37/73 (50%)

Query: 20 LEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYN 79
          L +   K AD R  GY  + S        L Y++ VL  GPR MANRKPF+L   + +YN
Sbjct: 7  LYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYN 66

Query: 80 VFQILSCANIIYQ 92
             +     I+Y+
Sbjct: 67 FSLVALSLYIVYE 79

Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 42/76 (55%)

Query: 19 ALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIY 78
          ++  +  K  D RT  +  ++S    +   L Y+++V   GPR M NRKPF+L  T+ +Y
Sbjct: 10 SMHHYMDKYGDPRTKDWPLMSSPFPTLALCLGYVYLVKVLGPRLMENRKPFQLRNTLILY 69

Query: 79 NVFQILSCANIIYQTG 94
          N  Q++  A + Y+ G
Sbjct: 70 NFVQVVFSAWLFYEIG 85

Could be implicated in synthesis of very long chain fatty acids.

Aedes aegypti (taxid: 7159)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 38/67 (56%)

Query: 26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
          KDAD R + YL ++S   Q     +Y++ V   GP+ M NRKPF+L+  +  YN F +L 
Sbjct: 19 KDADPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLF 78

Query: 86 CANIIYQ 92
             + Y+
Sbjct: 79 SVYMCYE 85

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%)

Query: 26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
          K AD R   Y  + S        L Y++ +L  GPR MANRKPF+L   + +YN   ++ 
Sbjct: 13 KHADPRIQSYPLMGSPLLITSILLTYVYFILSLGPRIMANRKPFQLRGFMIVYNFSLVIL 72

Query: 86 CANIIYQ 92
             I+Y+
Sbjct: 73 SLYIVYE 79

Involved in the biosynthesis of C26 fatty acids and sphingolipids. Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis. Important for sphingolipid biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
          KDAD R + +L ++S   Q     +Y++ V   GP+ M NRKPF+L+  +  YN F +L 
Sbjct: 19 KDADPRVENWLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLF 78

Query: 86 CANIIYQ 92
             + Y+
Sbjct: 79 SVYMCYE 85

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
          KDAD R + +L ++S   Q      Y++ V   GP+ M NRKPF+L+  +  YN F +L 
Sbjct: 19 KDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLF 78

Query: 86 CANIIYQ 92
             + Y+
Sbjct: 79 SVYMCYE 85

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs, especially C18:3(n-3) acyl-CoAs and C18:3(n-6)-CoAs. Also active toward C20:4-, C18:0-, C18:1-, C18:2-and C16:0-CoAs, and weakly toward C20:0-CoA. Little or no activity toward C22:0-, C24:0-, or C26:0-CoAs.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
          KDAD R + +L ++S   Q      Y++ V   GP+ M NRKPF+L+  +  YN   +L 
Sbjct: 19 KDADPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLF 78

Query: 86 CANIIYQ 92
             + Y+
Sbjct: 79 SVYMFYE 85

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
239789503	159	ACYPI009864 [Acyrthosiphon pisum]	0.707	0.471	0.386	8e-10
193592017	273	PREDICTED: elongation of very long chain	0.707	0.274	0.386	9e-10
194746323	297	GF16146 [Drosophila ananassae] gi|190628	0.801	0.286	0.402	4e-09
170055907	320	elongase [Culex quinquefasciatus] gi|167	0.726	0.240	0.376	1e-08
307189271	230	Elongation of very long chain fatty acid	0.773	0.356	0.369	3e-08
242020075	267	elongation of very long chain fatty acid	0.764	0.303	0.358	7e-08
322799131	226	hypothetical protein SINV_10258 [Solenop	0.537	0.252	0.508	1e-07
241174086	280	fatty acyl-CoA elongase, putative [Ixode	0.632	0.239	0.463	2e-07
198432000	278	PREDICTED: similar to elongation of very	0.603	0.230	0.406	3e-07
157103915	311	elongase, putative [Aedes aegypti] gi|10	0.830	0.282	0.347	4e-07

>gi|239789503|dbj|BAH71373.1| ACYPI009864 [Acyrthosiphon pisum]

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 46/75 (61%)

Query: 17 FTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIR 76
          F  L+ F  +  D RT+ +  +  +   +  + VYL++VLY GP+FM NRKPF L   I+
Sbjct: 8  FEKLDAFVDQYGDPRTNEWPMVQGITTPLACASVYLYLVLYLGPKFMENRKPFHLLPIIK 67

Query: 77 IYNVFQILSCANIIY 91
          +YN+ Q+++C  I Y
Sbjct: 68 VYNLVQLVACILIFY 82

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193592017|ref|XP_001951537.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Acyrthosiphon pisum]

 Score = 67.8 bits (164), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 46/75 (61%)

Query: 17 FTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIR 76
          F  L+ F  +  D RT+ +  +  +   +  + VYL++VLY GP+FM NRKPF L   I+
Sbjct: 8  FEKLDAFVDQYGDPRTNEWPMVQGITTPLACASVYLYLVLYLGPKFMENRKPFHLLPIIK 67

Query: 77 IYNVFQILSCANIIY 91
          +YN+ Q+++C  I Y
Sbjct: 68 VYNLVQLVACILIFY 82

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194746323|ref|XP_001955630.1| GF16146 [Drosophila ananassae] gi|190628667|gb|EDV44191.1| GF16146 [Drosophila ananassae]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 1  METREGSSTSGGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGP 60
          M     +     W  LFT L       AD RT+ +  + S    +G    YLF VLY GP
Sbjct: 1  MADVNATQKVDYWNFLFTDL-------ADPRTNDWFLIKSPLPLLGILAFYLFFVLYWGP 53

Query: 61 RFMANRKPFKLEATIRIYNVFQILSCANIIYQ 92
          RFM NRKPFKLE T+ +YN FQ+     ++Y+
Sbjct: 54 RFMKNRKPFKLERTLLVYNFFQVALSVWMVYE 85

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170055907|ref|XP_001863792.1| elongase [Culex quinquefasciatus] gi|167875760|gb|EDS39143.1| elongase [Culex quinquefasciatus]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 45/77 (58%)

Query: 16 LFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATI 75
          +F  + +F  ++ D RT G+    S+   I   + YL+  LYAGPR+MA RKPFKLE  +
Sbjct: 10 IFHRIAKFFVENQDERTTGWFLSGSMTPLIIILVTYLYFCLYAGPRYMAKRKPFKLEGVL 69

Query: 76 RIYNVFQILSCANIIYQ 92
            YN  Q++    ++Y+
Sbjct: 70 IAYNAIQVVLSIWLVYE 86

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189271|gb|EFN73713.1| Elongation of very long chain fatty acids protein 1 [Camponotus floridanus]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 2/84 (2%)

Query: 14  FRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLV-YLFIVLYAGPRFMANRKPFKLE 72
           + L TA  +   + +D+RT+ +L +NS+ +QI   L+ Y++ VL  GPR+M NR P+ L 
Sbjct: 22  YHLITAHYKSVFEFSDQRTNNWLLMNSM-YQIPFLLIAYVYFVLRCGPRYMKNRPPYSLR 80

Query: 73  ATIRIYNVFQILSCANIIYQTGSA 96
             ++ YN+FQI++ A ++Y+  +A
Sbjct: 81  TFMKFYNIFQIIANAWLVYEHIAA 104

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242020075|ref|XP_002430482.1| elongation of very long chain fatty acids protein, putative [Pediculus humanus corporis] gi|212515633|gb|EEB17744.1| elongation of very long chain fatty acids protein, putative [Pediculus humanus corporis]

 Score = 61.6 bits (148), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%)

Query: 17 FTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIR 76
          F  +     + +D R+  + F++S    I   + YL+ V  AGP++M N+KP+ L   I 
Sbjct: 10 FDDINRLLNEKSDVRSRDWAFMDSPYPLITICVCYLYFVCKAGPQYMKNKKPYNLNKIIT 69

Query: 77 IYNVFQILSCANIIYQTGSAF 97
          +YN FQI +C  IIY   S+F
Sbjct: 70 VYNAFQIFACLAIIYGMLSSF 90

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799131|gb|EFZ20578.1| hypothetical protein SINV_10258 [Solenopsis invicta]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 41/57 (71%)

Query: 28 ADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQIL 84
           D RT  +LF++S    I  SLVYLF+V +AGPRFM NR+P+  +A ++ YN+FQI+
Sbjct: 34 TDVRTVKWLFVSSPMLIIFISLVYLFVVYFAGPRFMKNRQPYSCKAFMQGYNLFQII 90

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241174086|ref|XP_002410960.1| fatty acyl-CoA elongase, putative [Ixodes scapularis] gi|215495055|gb|EEC04696.1| fatty acyl-CoA elongase, putative [Ixodes scapularis]

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)

Query: 21 EEFA--AKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIY 78
          E+FA  A   D RT G+     L F +   L YL++V  AGPR+M NRKP+ L+A I  Y
Sbjct: 15 EKFAYLASLRDPRTAGWSLTADLRFMLPVCLGYLYVVKIAGPRWMMNRKPYNLKAAIMGY 74

Query: 79 NVFQILSCA 87
          NVFQ+++ A
Sbjct: 75 NVFQVIANA 83

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198432000|ref|XP_002122915.1| PREDICTED: similar to elongation of very long chain fatty acids-like 7 [Ciona intestinalis]

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%)

Query: 29 DRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCAN 88
          D R+  Y  + S  F + ++L+YLFIV++AGPR+M NRK F L   I +YN+  ++  A 
Sbjct: 20 DPRSLAYPLIESHAFNVCSTLLYLFIVIFAGPRYMKNRKAFDLRKAIVVYNLTMVVVSAW 79

Query: 89 IIYQ 92
          ++Y+
Sbjct: 80 MVYE 83

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157103915|ref|XP_001648181.1| elongase, putative [Aedes aegypti] gi|108869309|gb|EAT33534.1| AAEL014190-PA [Aedes aegypti]

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1  METREGSSTSGGWFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGP 60
          M+    + +SG     F  + +F   + D RT  +    S+   I     YL+  LYAGP
Sbjct: 1  MQAETMTDSSG----FFDRIVQFFVDNQDERTKQWFLSGSMTPLIMILATYLYFCLYAGP 56

Query: 61 RFMANRKPFKLEATIRIYNVFQILSCANIIYQ 92
          R+MA RKPFKLE  +  YN  Q+L    ++Y+
Sbjct: 57 RWMAKRKPFKLENVLIGYNAVQVLLSIVLVYE 88

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
FB|FBgn0038986	295	CG5278 [Drosophila melanogaste	0.688	0.247	0.412	4.4e-09
ZFIN|ZDB-GENE-040426-2755	320	elovl1b "elongation of very lo	0.603	0.2	0.453	1.9e-08
UNIPROTKB|Q3T120	279	ELOVL1 "Uncharacterized protei	0.632	0.240	0.388	2.3e-07
ZFIN|ZDB-GENE-030131-5485	282	elovl7b "ELOVL family member 7	0.632	0.237	0.417	2.4e-07
FB|FBgn0051522	365	CG31522 [Drosophila melanogast	0.716	0.208	0.315	2.4e-07
FB|FBgn0039030	272	CG6660 [Drosophila melanogaste	0.698	0.272	0.351	2.8e-07
UNIPROTKB|Q9BW60	279	ELOVL1 "Elongation of very lon	0.632	0.240	0.388	3e-07
ZFIN|ZDB-GENE-041010-66	315	elovl1a "elongation of very lo	0.669	0.225	0.366	3e-07
UNIPROTKB|E2RGY9	278	ELOVL1 "Uncharacterized protei	0.632	0.241	0.388	4.9e-07
FB|FBgn0037762	257	eloF "elongase F" [Drosophila	0.377	0.155	0.575	5.2e-07

FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)]

 Score = 139 (54.0 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 33/80 (41%), Positives = 45/80 (56%)

Query:    13 WFRLFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLE 72
             W  LFT L       AD RT+ +  + S    +G    YLF VL  GP+FM +RKPFKLE
Sbjct:    12 WNFLFTDL-------ADPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLE 64

Query:    73 ATIRIYNVFQILSCANIIYQ 92
              T+ +YN FQ+     ++Y+
Sbjct:    65 RTLLVYNFFQVALSVWMVYE 84

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-2755 elovl1b "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1b" [Danio rerio (taxid:7955)]

 Score = 134 (52.2 bits), Expect = 1.9e-08, P = 1.9e-08
 Identities = 29/64 (45%), Positives = 38/64 (59%)

Query:    29 DRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCAN 88
             D R   Y  + S        L YLF VLYAGP+FMANRKPF+L+  + IYN+  +   A 
Sbjct:    21 DPRLKDYPLMESPFSMTAILLAYLFFVLYAGPKFMANRKPFQLKEAMIIYNLSLVGLSAY 80

Query:    89 IIYQ 92
             I+Y+
Sbjct:    81 IVYE 84

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q3T120 ELOVL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 123 (48.4 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 26/67 (38%), Positives = 35/67 (52%)

Query:    26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
             K AD R  GY  + S        L Y++ VL  GPR MANRKPF+L   + +YN   +  
Sbjct:    13 KHADPRVQGYPLMESPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMVVYNFSLVAL 72

Query:    86 CANIIYQ 92
                I+Y+
Sbjct:    73 SLYIVYE 79

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0009922 "fatty acid elongase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)]

 Score = 123 (48.4 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 28/67 (41%), Positives = 39/67 (58%)

Query:    26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
             K+AD RT  +L + S   Q      Y+F V   GPR M NRKPF+L+ T+ IYN+  +L 
Sbjct:    19 KEADPRTGNWLLMGSPFPQTFIIAAYVFFVTTLGPRLMENRKPFQLKNTMIIYNLSIVLF 78

Query:    86 CANIIYQ 92
                +IY+
Sbjct:    79 SLYMIYE 85

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)]

 Score = 125 (49.1 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 24/76 (31%), Positives = 42/76 (55%)

Query:    19 ALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIY 78
             ++  +    +D RT G+  ++S    +   L Y+++V   GPR M NRKP  L+ T+ +Y
Sbjct:    10 SISRYMDSHSDSRTKGWPMMSSPFPTLAVCLTYVYLVKVLGPRLMENRKPLNLQNTLVMY 69

Query:    79 NVFQILSCANIIYQTG 94
             N  Q++  A + Y+ G
Sbjct:    70 NAIQVVFSAWLFYEIG 85

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0039030 CG6660 [Drosophila melanogaster (taxid:7227)]

 Score = 122 (48.0 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query:    16 LFTALEEFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATI 75
             L+  + +  A+  D R      L +L   +    +Y+  VL+ GPR+MANR PF+L+  +
Sbjct:     5 LYCLVRDLYAEHGDPRVAHLPLLGNLWIVLAIVALYVAFVLHYGPRWMANRAPFELKRVM 64

Query:    76 RIYNVFQILSCANI 89
             ++YNV Q+L+ A I
Sbjct:    65 QVYNVVQVLANATI 78

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9BW60 ELOVL1 "Elongation of very long chain fatty acids protein 1" [Homo sapiens (taxid:9606)]

 Score = 122 (48.0 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 26/67 (38%), Positives = 35/67 (52%)

Query:    26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
             K AD R  GY  + S        L Y++ VL  GPR MANRKPF+L   + +YN   +  
Sbjct:    13 KHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFSLVAL 72

Query:    86 CANIIYQ 92
                I+Y+
Sbjct:    73 SLYIVYE 79

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IDA

GO:0030148 "sphingolipid biosynthetic process" evidence=IMP

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0009922 "fatty acid elongase activity" evidence=IDA

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0019432 "triglyceride biosynthetic process" evidence=TAS

GO:0035338 "long-chain fatty-acyl-CoA biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

ZFIN|ZDB-GENE-041010-66 elovl1a "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1a" [Danio rerio (taxid:7955)]

 Score = 123 (48.4 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 26/71 (36%), Positives = 37/71 (52%)

Query:    22 EFAAKDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVF 81
             ++  K  D R   Y  + S        L Y+F VLY GPR+MA+RKPF+L   +  YN F
Sbjct:    14 DYLLKRTDARVRDYPLMQSPILMTFILLGYVFSVLYVGPRYMASRKPFRLNTAMIAYNFF 73

Query:    82 QILSCANIIYQ 92
              +   A  +Y+
Sbjct:    74 MVAFNAYTVYE 84

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2RGY9 ELOVL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 120 (47.3 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 26/67 (38%), Positives = 35/67 (52%)

Query:    26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILS 85
             K AD R  GY  + S        L Y++ VL  GPR MANRKPF+L   + +YN   +  
Sbjct:    13 KYADPRLQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFSLVAL 72

Query:    86 CANIIYQ 92
                I+Y+
Sbjct:    73 SLYIVYE 79

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0009922 "fatty acid elongase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0037762 eloF "elongase F" [Drosophila melanogaster (taxid:7227)]

 Score = 119 (46.9 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 23/40 (57%), Positives = 28/40 (70%)

Query:    45 IGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQIL 84
             +GT + YL  VL  GP+ M +RKPF L   IRIYN+FQIL
Sbjct:    20 MGTLIGYLLFVLKLGPKIMEHRKPFHLNGVIRIYNIFQIL 59

GO:0016021 "integral to membrane" evidence=IEA

GO:0042810 "pheromone metabolic process" evidence=IMP

GO:0007619 "courtship behavior" evidence=IMP

GO:0009922 "fatty acid elongase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	106
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	2e-09

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 36  LFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGS 95
             L+S    I   ++YL  V   GP+ M NRKPF L+  + ++N+F +L      Y   +
Sbjct: 1   PLLSSPWPVILIIVLYLVFVFL-GPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGFYGLLA 59

Query: 96  AFFVSL 101
                 
Sbjct: 60  GAGWGR 65

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	106
PTZ00251	272	fatty acid elongase; Provisional	99.66
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	99.59
KOG3071|consensus	274		99.53
KOG3072|consensus	282		99.21

>PTZ00251 fatty acid elongase; Provisional

Probab=99.66  E-value=7.6e-17  Score=126.30  Aligned_cols=68  Identities=13%  Similarity=0.297  Sum_probs=62.0

Q ss_pred             hhcC-CCcCccccccchhHHHHHHHHHHhHhhhcchhhhcc----CCCcc-chhHHHHHHHHHHHHHHHHHHHHHH
Q psy12866         26 KDAD-RRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMAN----RKPFK-LEATIRIYNVFQILSCANIIYQTGS   95 (106)
Q Consensus        26 ~~~d-~r~~~wplm~sp~~~i~i~~~Yl~~V~~~Gp~~Mk~----Rkpf~-Lk~~l~~yNl~~v~~S~~~~~~~~~   95 (106)
                      ...| +|+++| +++||++++.++++|+++|+ .||++||+    ||||+ ||+++.+||++|+++|++++++++.
T Consensus        10 ~~f~~~~~~~w-l~~~~~~~~~i~~~Yl~~V~-~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~~   83 (272)
T PTZ00251         10 NHYDGHAVQKW-LASNVDICVYIAAAYLTFVF-KGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVVP   83 (272)
T ss_pred             ccCCcHHHHHH-HHhCCHHHHHHHHHHHHHHH-HHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444 678999 78999999999999999999 99999975    99999 9999999999999999999998863

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=99.59  E-value=2.5e-15  Score=115.41  Aligned_cols=60  Identities=38%  Similarity=0.687  Sum_probs=56.3

Q ss_pred             ccccchhHHHHHHHHHHhHhhhcchhhhccCCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy12866         36 LFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSA   96 (106)
Q Consensus        36 plm~sp~~~i~i~~~Yl~~V~~~Gp~~Mk~Rkpf~Lk~~l~~yNl~~v~~S~~~~~~~~~~   96 (106)
                      .|++||++++.++++|+++|+ .||++||+|||++||.++.+||++|+++|++++++++..
T Consensus         1 Wl~~~~~~~~~~~~~Yl~~V~-~g~~~m~~Rkp~~Lk~~~~~~N~~l~~~S~~~~~~~~~~   60 (250)
T PF01151_consen    1 WLMSNPWFPILIVVLYLLFVF-LGPRFMKNRKPFNLKTLIIVYNLFLVVFSAYMFYGILPA   60 (250)
T ss_pred             CcccCCHHHHHHHHHHHHHHH-HHHHHHhhCCCcccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            046899999999999999997 999999999999999999999999999999999999844

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>KOG3071|consensus

Probab=99.53  E-value=3e-14  Score=112.07  Aligned_cols=71  Identities=34%  Similarity=0.434  Sum_probs=62.0

Q ss_pred             hhcCCCcCccccccchhHHHHHHHHHHhHhhhcchhhhccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12866         26 KDADRRTDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGSAFF   98 (106)
Q Consensus        26 ~~~d~r~~~wplm~sp~~~i~i~~~Yl~~V~~~Gp~~Mk~Rkpf~Lk~~l~~yNl~~v~~S~~~~~~~~~~~~   98 (106)
                      ...|++++ ||++++++++..++.+|+ +|.+.||++|+||||++||+++.+||++|++.|++++.+.....+
T Consensus        16 ~~~~~~v~-~~~l~s~~~~~~il~~yl-~v~~~G~~~m~nrkp~~l~~~~~vyN~~~vl~s~~i~~~~~~~~~   86 (274)
T KOG3071|consen   16 WSPDDRVR-SPLLSSPWPLLSILLAYL-FVLKLGPKLMRNRKPLKLRGLSQVYNLGQVLLSAAIFLEGELWRW   86 (274)
T ss_pred             CCCCcccc-chhccCcHHHHHHHHHHH-HHHHhcHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            44577666 899999999999999999 666699999999999999999999999999999997776655544

>KOG3072|consensus

Probab=99.21  E-value=2.3e-11  Score=96.07  Aligned_cols=62  Identities=24%  Similarity=0.414  Sum_probs=52.8

Q ss_pred             cCccccccchhHHHHHHHHHHhHhhhcchhhhccCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy12866         32 TDGYLFLNSLNFQIGTSLVYLFIVLYAGPRFMANRKPFKLEATIRIYNVFQILSCANIIYQTGS   95 (106)
Q Consensus        32 ~~~wplm~sp~~~i~i~~~Yl~~V~~~Gp~~Mk~Rkpf~Lk~~l~~yNl~~v~~S~~~~~~~~~   95 (106)
                      +..|. .+.+...+.++++|+++|+ +|+++|+|||||+|++++.+||.++++||+..+.++.-
T Consensus        31 ~~~~~-~~~~~~si~is~~Y~v~if-~~q~fM~~RkpF~L~~pL~lWn~~La~FSi~g~lr~~~   92 (282)
T KOG3072|consen   31 VVKFF-QEHWPLSIHISIAYLVLIF-GGQNFMKNRKPFQLTKPLNLWNFCLAAFSILGALRTIP   92 (282)
T ss_pred             HHHHH-HhccchhHHHHHHHHHHHH-HHHHHHhcCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Confidence            34442 3444567999999999999 99999999999999999999999999999998877543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00