Psyllid ID: psy12877
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | 2.2.26 [Sep-21-2011] | |||||||
| P24752 | 427 | Acetyl-CoA acetyltransfer | yes | N/A | 0.390 | 0.744 | 0.680 | 1e-129 | |
| Q8QZT1 | 424 | Acetyl-CoA acetyltransfer | yes | N/A | 0.394 | 0.757 | 0.701 | 1e-128 | |
| Q6GN02 | 420 | Acetyl-CoA acetyltransfer | N/A | N/A | 0.390 | 0.757 | 0.686 | 1e-128 | |
| Q29RZ0 | 422 | Acetyl-CoA acetyltransfer | yes | N/A | 0.394 | 0.760 | 0.692 | 1e-128 | |
| Q8HXY6 | 427 | Acetyl-CoA acetyltransfer | N/A | N/A | 0.390 | 0.744 | 0.677 | 1e-128 | |
| Q6NU46 | 420 | Acetyl-CoA acetyltransfer | N/A | N/A | 0.390 | 0.757 | 0.683 | 1e-128 | |
| P17764 | 424 | Acetyl-CoA acetyltransfer | yes | N/A | 0.394 | 0.757 | 0.692 | 1e-127 | |
| Q5BKN8 | 420 | Acetyl-CoA acetyltransfer | yes | N/A | 0.390 | 0.757 | 0.680 | 1e-126 | |
| Q6AZA0 | 420 | Acetyl-CoA acetyltransfer | yes | N/A | 0.390 | 0.757 | 0.673 | 1e-125 | |
| Q6L8K7 | 397 | Acetyl-CoA acetyltransfer | yes | N/A | 0.386 | 0.793 | 0.551 | 1e-94 |
| >sp|P24752|THIL_HUMAN Acetyl-CoA acetyltransferase, mitochondrial OS=Homo sapiens GN=ACAT1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/319 (68%), Positives = 263/319 (82%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 91 MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVA 150
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ +NRG T YGG+ L D IV DGL+DVYNKIHMG+CAENTAKK NI+R+E
Sbjct: 151 GGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNE 210
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SY +S A++ F ++++PV++ KG+ D++V EDEEYK+++F K L T
Sbjct: 211 QDAYAINSYTRSKAAWEAGKFGNEVIPVTV-TVKGQPDVVVKEDEEYKRVDFSKVPKLKT 269
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT +A ++ N PLARI+A+ DAA EPIDFPIAP
Sbjct: 270 VFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAP 329
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+A +LK+ G+ K+D+A+WE+NEAFS+VVLANIK L+IDP KVN++GGAVSLGHPIGM
Sbjct: 330 VYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGM 389
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV HL HALK G+ G
Sbjct: 390 SGARIVGHLTHALKQGEYG 408
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Plays a major role in ketone body metabolism. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9 |
| >sp|Q8QZT1|THIL_MOUSE Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus GN=Acat1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/322 (70%), Positives = 265/322 (82%), Gaps = 1/322 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQA + AGLP ST CTTVNKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 88 MGNVIQGGEGQAPTRQATLGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVA 147
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NISR E
Sbjct: 148 GGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNISRQE 207
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YALSSY +S +A+ F+S+I P++I KGK D++V EDEEYK+++F K L T
Sbjct: 208 QDTYALSSYTRSKEAWDAGKFASEITPITI-SVKGKPDVVVKEDEEYKRVDFSKVPKLKT 266
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGT+TA NASTLNDGAAA VLMT EA ++ N KPLARI A+ DAA +PIDFP+AP
Sbjct: 267 VFQKENGTITAANASTLNDGAAALVLMTAEAAQRLNVKPLARIAAFADAAVDPIDFPLAP 326
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK G+ K+D+A+WE+NEAFSVVVLANIK L+IDP KVN+HGGAVSLGHPIGM
Sbjct: 327 AYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNIHGGAVSLGHPIGM 386
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+H+ HALK G+ G S
Sbjct: 387 SGARIVVHMAHALKPGEFGLAS 408
|
Plays a major role in ketone body metabolism. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6GN02|THILB_XENLA Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/319 (68%), Positives = 262/319 (82%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQAP RQA + AGL ST TT+NKVCASGMK++MLA+Q+L GHQ VMVA
Sbjct: 84 MGNVLQAGQGQAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVA 143
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNK HMGNCAENTAKK +ISR+E
Sbjct: 144 GGMESMSNVPYCMSRGATPYGGVKLEDIIVKDGLTDVYNKFHMGNCAENTAKKLSISREE 203
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A++SY +S A+ + + +++I PV+I Q KGK DIIV EDEEYK+++F KF L T
Sbjct: 204 QDGFAITSYTRSKAAWDSGLIANEIAPVTIAQ-KGKPDIIVQEDEEYKRVDFSKFPKLKT 262
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQK+NGTVTA N+STLNDGAAA VLMT EA + N PLARI+A+ DAA +PIDFPIAP
Sbjct: 263 VFQKDNGTVTAANSSTLNDGAAALVLMTAEAANRLNVTPLARIVAFADAAVDPIDFPIAP 322
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+AIP LL G+ K+D+A+WEINEAFSVVVLANIK LDIDP++VNV+GGAVSLGHPIGM
Sbjct: 323 AYAIPKLLSEAGLKKEDIAMWEINEAFSVVVLANIKMLDIDPARVNVNGGAVSLGHPIGM 382
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV H+ HAL+ GQ G
Sbjct: 383 SGARIVGHMAHALRKGQFG 401
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Plays a major role in ketone body metabolism. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q29RZ0|THIL_BOVIN Acetyl-CoA acetyltransferase, mitochondrial OS=Bos taurus GN=ACAT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/322 (69%), Positives = 266/322 (82%), Gaps = 1/322 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ L GHQDVMVA
Sbjct: 86 MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQNLMCGHQDVMVA 145
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ +NRG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NI+R+E
Sbjct: 146 GGMESMSNVPYVMNRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLNITREE 205
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YAL+SY +S A++ F +++VPV+I KGK D++V EDEEYK+++F K L T
Sbjct: 206 QDTYALNSYTRSKAAWEAGRFGNEVVPVTI-TVKGKPDVVVKEDEEYKRVDFSKIPKLKT 264
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQ+ENGTVTA NASTLNDGAAA VLMT +A ++ N KPLARI A+ DAA EPIDFP+AP
Sbjct: 265 VFQRENGTVTAANASTLNDGAAAVVLMTADAAKRLNVKPLARIAAFADAAVEPIDFPLAP 324
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK+ G+ K+D+ +WE+NEAFSVVVLANIK L++DP KVN++GGAVSLGHPIGM
Sbjct: 325 AYAVPKVLKDAGLKKEDITMWEVNEAFSVVVLANIKMLEMDPQKVNINGGAVSLGHPIGM 384
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 385 SGARIVVHLAHALKQGEYGLAS 406
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Plays a major role in ketone body metabolism. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q8HXY6|THIL_MACFA Acetyl-CoA acetyltransferase, mitochondrial OS=Macaca fascicularis GN=ACAT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/319 (67%), Positives = 261/319 (81%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST TT+NKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 91 MGNVLQGGEGQAPARQAVLGAGLPISTPRTTINKVCASGMKAIMMASQSLMCGHQDVMVA 150
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ +NRG T YGG+ L D IV DGL+DVYNKIHMG+CAENTAKK NI+RDE
Sbjct: 151 GGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARDE 210
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SY +S A++ F ++++PV++ KG+ D++V EDEEYK+++F K L T
Sbjct: 211 QDAYAINSYTRSKAAWEAGKFGNEVIPVTV-TVKGQPDVVVKEDEEYKRVDFSKVPKLKT 269
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGT+TA NASTLNDGAAA VLMT A ++ N PLARI+A+ DAA EPIDFPIAP
Sbjct: 270 VFQKENGTITAANASTLNDGAAALVLMTAGAAKRLNVTPLARIVAFADAAVEPIDFPIAP 329
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+ +LK+ G+ K+D+A+WE+NEAFS+VVLANIK L+IDP KVN++GGAVSLGHPIGM
Sbjct: 330 VHAVSMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGM 389
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV HL HALK G+ G
Sbjct: 390 SGARIVGHLTHALKQGEYG 408
|
Plays a major role in ketone body metabolism. Macaca fascicularis (taxid: 9541) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6NU46|THILA_XENLA Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/319 (68%), Positives = 262/319 (82%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQAP RQA + AGL ST TT+NKVCASGMK++MLA+Q+L GHQ VMVA
Sbjct: 84 MGNVLQAGQGQAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVA 143
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKKF+ISR+E
Sbjct: 144 GGMESMSNVPYCMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKFSISREE 203
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A+ SY +S A+ + + +++I PV+I Q KGK DIIV EDEEYK+++F KF L T
Sbjct: 204 QDSFAIHSYTRSKAAWDSGLIANEIAPVTIAQ-KGKPDIIVQEDEEYKRVDFSKFPKLKT 262
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQK+NGTVTA N+STLNDGAAA +LMT EA + N PLARI+A+ DAA +PIDFPIAP
Sbjct: 263 VFQKDNGTVTAANSSTLNDGAAALLLMTTEAANRLNVTPLARIVAFADAAVDPIDFPIAP 322
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P LL G+ K+D+A+WEINEAFSVVVLANIK L IDP++VN++GGAVSLGHPIGM
Sbjct: 323 AYAVPKLLSEAGLKKEDIAMWEINEAFSVVVLANIKMLGIDPARVNMNGGAVSLGHPIGM 382
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV H+ HALK GQ G
Sbjct: 383 SGARIVGHMAHALKKGQFG 401
|
Plays a major role in ketone body metabolism. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|P17764|THIL_RAT Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/322 (69%), Positives = 265/322 (82%), Gaps = 1/322 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQA + AGLP +T CTTVNKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 88 MGNVIQGGEGQAPTRQATLGAGLPIATPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVA 147
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK +ISR+E
Sbjct: 148 GGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLSISREE 207
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD+YA+ SY +S +A+ F+++I P++I KGK D++V EDEEYK+++F K L T
Sbjct: 208 QDKYAIGSYTRSKEAWDAGKFANEITPITI-SVKGKPDVVVKEDEEYKRVDFSKVPKLKT 266
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT EA ++ KPLARI A+ DAA +PIDFP+AP
Sbjct: 267 VFQKENGTVTAANASTLNDGAAAVVLMTAEAAQRLKVKPLARIAAFADAAVDPIDFPLAP 326
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK G+ K+D+A+WE+NEAFSVVVLANIK L+IDP KVNVHGGAVSLGHPIGM
Sbjct: 327 AYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNVHGGAVSLGHPIGM 386
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 387 SGARIVVHLAHALKQGEFGLAS 408
|
Plays a major role in ketone body metabolism. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q5BKN8|THIL_XENTR Acetyl-CoA acetyltransferase, mitochondrial OS=Xenopus tropicalis GN=acat1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/319 (68%), Positives = 260/319 (81%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQAP RQA + AGL ST TT+NKVCASGMK+IMLA+Q+L GHQ VMVA
Sbjct: 84 MGNVLQAGQGQAPSRQATLGAGLAISTPTTTINKVCASGMKSIMLAAQSLMCGHQQVMVA 143
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNK HMGNCAENTAKK +ISR+E
Sbjct: 144 GGMESMSNVPYCMSRGATPYGGVKLEDIIVKDGLTDVYNKFHMGNCAENTAKKLSISREE 203
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A++SY +S A+ + + +++IV V+I Q KG+ DIIV EDEEYK+++F KF L T
Sbjct: 204 QDSFAINSYTRSKAAWDSGLIANEIVSVTISQ-KGRPDIIVQEDEEYKRVDFSKFSKLKT 262
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQK+NGTVTA NASTLNDGAAA VLMT A + N PLARI+A+ DAA +PIDFPIAP
Sbjct: 263 VFQKDNGTVTAANASTLNDGAAALVLMTAGAASRLNVTPLARIVAFADAAVDPIDFPIAP 322
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P LL G+ K+D+A+WEINEAFSVVVLAN+K LDIDP++VNV+GGAVSLGHPIGM
Sbjct: 323 AYAVPKLLSEAGLKKEDIAMWEINEAFSVVVLANVKMLDIDPARVNVNGGAVSLGHPIGM 382
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV H+ H LK GQ G
Sbjct: 383 SGARIVGHMAHVLKKGQFG 401
|
Plays a major role in ketone body metabolism. Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6AZA0|THIL_DANRE Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/319 (67%), Positives = 257/319 (80%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQAP RQA++ AGLP ST TT+NKVCASGMK+IMLASQ+L GHQDVMVA
Sbjct: 84 MGNVLQAGEGQAPTRQALLGAGLPLSTPATTINKVCASGMKSIMLASQSLMCGHQDVMVA 143
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMS VP+ + R YGG+ + D IV DGL+DVYNK HMGNCAENTAK +ISR+E
Sbjct: 144 GGMESMSQVPYIMAREAPPYGGVKMEDLIVKDGLTDVYNKFHMGNCAENTAKNSSISREE 203
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A+ SY S A+++ + + ++VPVSIPQR GK D++V EDEEY+K++F K L
Sbjct: 204 QDAFAIKSYTLSKAAWESGILAKEVVPVSIPQR-GKPDVVVKEDEEYRKVDFSKVPKLKA 262
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VF KENGTVTA NASTLNDGAAA VLMT +A ++ N PLA+I+A+ DAA PIDFPIAP
Sbjct: 263 VFLKENGTVTAANASTLNDGAAALVLMTADAAQRLNVTPLAKIVAFADAAVAPIDFPIAP 322
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
AFA+P +LK G+ K+D+A+WEINEAFSVVVLANIK LDIDP +VN++GGAVSLGHPIGM
Sbjct: 323 AFAVPKVLKAAGIKKEDIAMWEINEAFSVVVLANIKMLDIDPDRVNINGGAVSLGHPIGM 382
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV H+ H LKSGQ G
Sbjct: 383 SGARIVGHMVHNLKSGQYG 401
|
Plays a major role in ketone body metabolism. Danio rerio (taxid: 7955) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6L8K7|THIL_YARLI Acetyl-CoA acetyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PAT1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 221/319 (69%), Gaps = 4/319 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G V A GQAP RQ VI G P+S TT+NKVC+SG+K + LA+Q + G ++V+VA
Sbjct: 60 FGQVLTANSGQAPARQVVIKGGFPESVEATTINKVCSSGLKTVALAAQAIKAGDRNVIVA 119
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSN P+Y RG +G L D IV DGL D YN IHMGNC ENT K+ I+R++
Sbjct: 120 GGMESMSNTPYYSGRGLV-FGNQKLEDSIVKDGLWDPYNNIHMGNCCENTNKRDGITREQ 178
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDEYA+ SY+++ ++ KN F +IVPV I RKG + V+EDEE K N EK K L
Sbjct: 179 QDEYAIESYRRANESIKNGAFKDEIVPVEIKTRKGT--VTVSEDEEPKGANAEKLKGLKP 236
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VF K+ G+VTAGNAS +NDGA+A V+ + ++ LA+I++Y DAAT PIDF IAP
Sbjct: 237 VFDKQ-GSVTAGNASPINDGASAVVVASGTKAKELGTPVLAKIVSYADAATAPIDFTIAP 295
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+ AIP LK G+ K D+ALWEINEAFS V LAN+ +L ID SKVNV GGAV+LGHPIG
Sbjct: 296 SLAIPAALKKAGLTKDDIALWEINEAFSGVALANLMRLGIDKSKVNVKGGAVALGHPIGA 355
Query: 301 SGARIVIHLCHALKSGQKG 319
SG RI + L +ALK G+ G
Sbjct: 356 SGNRIFVTLVNALKEGEYG 374
|
Essential for n-decane utilization. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| 307184066 | 505 | Acetyl-CoA acetyltransferase, mitochondr | 0.391 | 0.631 | 0.758 | 1e-147 | |
| 383864963 | 408 | PREDICTED: acetyl-CoA acetyltransferase, | 0.389 | 0.776 | 0.746 | 1e-146 | |
| 328701395 | 414 | PREDICTED: acetyl-CoA acetyltransferase | 0.391 | 0.770 | 0.755 | 1e-146 | |
| 332023199 | 413 | Acetyl-CoA acetyltransferase, mitochondr | 0.391 | 0.772 | 0.749 | 1e-145 | |
| 307208194 | 498 | Acetyl-CoA acetyltransferase, mitochondr | 0.389 | 0.636 | 0.742 | 1e-144 | |
| 156544532 | 410 | PREDICTED: acetyl-CoA acetyltransferase | 0.391 | 0.778 | 0.736 | 1e-144 | |
| 350419060 | 413 | PREDICTED: acetyl-CoA acetyltransferase, | 0.389 | 0.767 | 0.733 | 1e-141 | |
| 189234785 | 502 | PREDICTED: similar to acetyl-CoA acetylt | 0.389 | 0.631 | 0.721 | 1e-141 | |
| 340708906 | 502 | PREDICTED: acetyl-CoA acetyltransferase, | 0.389 | 0.631 | 0.730 | 1e-141 | |
| 357613543 | 515 | putative acetyl-CoA acetyltransferase, m | 0.391 | 0.619 | 0.733 | 1e-141 |
| >gi|307184066|gb|EFN70601.1| Acetyl-CoA acetyltransferase, mitochondrial [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/319 (75%), Positives = 285/319 (89%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQ LGQAP RQA +FAGLPKST+CTTVNKVCASGMK+IMLASQ+L GHQ++++A
Sbjct: 76 MGNVCQGFLGQAPARQAALFAGLPKSTICTTVNKVCASGMKSIMLASQSLQCGHQEIILA 135
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+YL RGET YGG+ L DGIV+DGL+DVYNK HMGNCAENTAKK NI+R++
Sbjct: 136 GGMESMSNVPYYLARGETPYGGVKLQDGIVFDGLTDVYNKCHMGNCAENTAKKLNITREQ 195
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDEYA+SSYK+SA AYKNN+F ++VPVS+PQ+KGK DI+ EDEEYK++NFEKF +L+T
Sbjct: 196 QDEYAISSYKRSAAAYKNNIFKDELVPVSVPQKKGKPDIVFTEDEEYKRVNFEKFGNLST 255
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNASTLNDGAAA +L T + + N KPLA+++A+ DAAT+PIDFPIAP
Sbjct: 256 VFQKENGTVTAGNASTLNDGAAALILTTSKVAERLNLKPLAKVVAFQDAATDPIDFPIAP 315
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
AFA+P+LL+N GV K D+ALWEINEAFSVVV+AN K LDIDPSKVNVHGGAVSLGHPIGM
Sbjct: 316 AFAVPSLLQNAGVNKNDIALWEINEAFSVVVVANQKLLDIDPSKVNVHGGAVSLGHPIGM 375
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV+HL HALK+G+KG
Sbjct: 376 SGARIVVHLVHALKAGEKG 394
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383864963|ref|XP_003707947.1| PREDICTED: acetyl-CoA acetyltransferase, mitochondrial-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 238/319 (74%), Positives = 281/319 (88%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQA LGQAP RQA +FAGLPKST+CTTVNKVCASGMK+IMLASQ+L GHQ+++VA
Sbjct: 71 MGNVCQASLGQAPARQATLFAGLPKSTICTTVNKVCASGMKSIMLASQSLQCGHQEIIVA 130
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVPFYL RGETKYGGM L DGIV+DGL+DVYNK HMGNCAENTAKK+N++R+E
Sbjct: 131 GGMESMSNVPFYLQRGETKYGGMKLEDGIVFDGLTDVYNKCHMGNCAENTAKKYNVTRNE 190
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDEYA++SYK+SA +Y+N +F +++ +++PQ+KGKAD+I++EDEEYKK++F KF L T
Sbjct: 191 QDEYAINSYKRSAASYENKIFKDELISINVPQKKGKADLIIDEDEEYKKVDFAKFGKLNT 250
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNASTLNDGAAA VL T K + KPLARI+A+ DAAT+PIDFPIAP
Sbjct: 251 VFQKENGTVTAGNASTLNDGAAALVLTTTNVAEKMDLKPLARIVAFEDAATDPIDFPIAP 310
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+FAIP LLK G+ K D+ LWEINEAFSVVV+AN K LD+DPSKVN HGGAVSLGHPIGM
Sbjct: 311 SFAIPKLLKKAGINKNDITLWEINEAFSVVVIANQKLLDLDPSKVNAHGGAVSLGHPIGM 370
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV+HL HALK+G+KG
Sbjct: 371 SGARIVVHLIHALKAGEKG 389
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328701395|ref|XP_001947313.2| PREDICTED: acetyl-CoA acetyltransferase B, mitochondrial-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/319 (75%), Positives = 284/319 (89%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQ G+GQAP RQA IFAGLPKST+CTT+NKVCASGMK+IMLASQ+L GHQ ++VA
Sbjct: 77 MGNVCQGGVGQAPARQAAIFAGLPKSTICTTINKVCASGMKSIMLASQSLICGHQQIVVA 136
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVPFYL RGETKYGG+NL DGIV+DGL+DVYNK+HMG+CAENTAK+ ISR +
Sbjct: 137 GGMESMSNVPFYLARGETKYGGVNLSDGIVFDGLTDVYNKVHMGSCAENTAKQCGISRIQ 196
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD++ALSSYKKSADA+K F+ +IVPV++PQ++GK DI+V+EDEE+K+I+FEKFK L T
Sbjct: 197 QDDFALSSYKKSADAWKQGHFAQEIVPVNVPQKRGKPDIVVSEDEEFKRIDFEKFKKLNT 256
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNAST+NDGAAA VL E V++ N KPLAR++A+ D AT+PIDFPIAP
Sbjct: 257 VFQKENGTVTAGNASTINDGAAALVLTNENVVKELNLKPLARVVAFQDGATDPIDFPIAP 316
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
AFAIP LL G++K D+ALWEINEAFSVVVLANI KL++DPSK+NVHGGAVSLGHPIGM
Sbjct: 317 AFAIPKLLSKSGISKDDIALWEINEAFSVVVLANIMKLNLDPSKINVHGGAVSLGHPIGM 376
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV+HL +ALK GQKG
Sbjct: 377 SGARIVVHLAYALKPGQKG 395
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332023199|gb|EGI63455.1| Acetyl-CoA acetyltransferase, mitochondrial [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/319 (74%), Positives = 279/319 (87%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQA LGQAP RQA +FAGLP ST+CTTVNKVCASGMK++ML SQ+L GHQD+++A
Sbjct: 76 MGNVCQAFLGQAPARQAALFAGLPTSTICTTVNKVCASGMKSVMLGSQSLQCGHQDIVLA 135
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+YL+RGET YGG+ L DGIV+DGL+DVYNK HMGNC ENTAKKFNI+R +
Sbjct: 136 GGMESMSNVPYYLSRGETSYGGVKLEDGIVFDGLTDVYNKCHMGNCTENTAKKFNITRQQ 195
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDEYA+SSYK+SA AY NNVF ++V V++PQ+KGK D+ DEEYK++NFEKF L T
Sbjct: 196 QDEYAISSYKRSAAAYDNNVFKDELVSVNVPQKKGKPDVSFTTDEEYKRVNFEKFSKLNT 255
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNASTLNDGAAA +LMT + +K N KPLARI+A+ DAAT+PIDFPIAP
Sbjct: 256 VFQKENGTVTAGNASTLNDGAAALILMTSDVAQKLNLKPLARIVAFQDAATDPIDFPIAP 315
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
AFA+P+LL+N GV K D+ALWEINEAFS VV+AN K LDIDP+KVNVHGGAVSLGHPIGM
Sbjct: 316 AFAVPSLLQNAGVNKNDIALWEINEAFSAVVVANQKLLDIDPAKVNVHGGAVSLGHPIGM 375
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV+HL HALK+G+KG
Sbjct: 376 SGARIVVHLAHALKAGEKG 394
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307208194|gb|EFN85668.1| Acetyl-CoA acetyltransferase, mitochondrial [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 237/319 (74%), Positives = 281/319 (88%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQ LGQAP RQA +FAGLPKST+CTTVNKVCASGMK+IMLASQ+L GHQ++++A
Sbjct: 67 MGNVCQGFLGQAPARQAALFAGLPKSTICTTVNKVCASGMKSIMLASQSLQCGHQEIVLA 126
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+YL RG T YGG+ L DGIV+DGL+DVYNK HMGNCAENTAKK NISR +
Sbjct: 127 GGMESMSNVPYYLARGATSYGGLKLEDGIVFDGLTDVYNKCHMGNCAENTAKKLNISRRQ 186
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDEYA+SSYK+SA AY++N F ++VPVS+PQ+KGK D++ ++DEEYK++NFEKF +L+T
Sbjct: 187 QDEYAISSYKRSAAAYESNTFKDELVPVSVPQKKGKPDVMFDKDEEYKRVNFEKFSTLST 246
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQK+NGTVTAGNASTLNDGAAA V+ + E K N KPLAR++A+ DAAT+PIDFPIAP
Sbjct: 247 VFQKDNGTVTAGNASTLNDGAAALVMTSSEVAEKLNLKPLARVVAFHDAATDPIDFPIAP 306
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A A+P+LL+N GV K DVALWEINEAFSVV +AN K LDIDP+KVNVHGGAVSLGHPIGM
Sbjct: 307 ALAVPSLLENAGVNKNDVALWEINEAFSVVAVANQKLLDIDPAKVNVHGGAVSLGHPIGM 366
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV+HL HALK+G+KG
Sbjct: 367 SGARIVVHLVHALKAGEKG 385
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156544532|ref|XP_001607694.1| PREDICTED: acetyl-CoA acetyltransferase B, mitochondrial-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 235/319 (73%), Positives = 279/319 (87%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQA LGQAP RQA +FAGLPKST+CTTVNKVCASGMK++MLASQ L GHQD+++A
Sbjct: 73 MGNVCQAYLGQAPARQATLFAGLPKSTICTTVNKVCASGMKSVMLASQALQCGHQDIVLA 132
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVPFYL RGET YGG+ L DGIV+DGL+DVYNK HMGNCAENTAKK ISR++
Sbjct: 133 GGMESMSNVPFYLKRGETTYGGVKLEDGIVFDGLTDVYNKFHMGNCAENTAKKLGISREQ 192
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDE+A++SYK+SA AY+ N F ++VPV++PQ+KGK D++ + DEEYK++NFEKF L T
Sbjct: 193 QDEFAINSYKRSAAAYEQNAFKDELVPVNVPQKKGKPDVVFSADEEYKRVNFEKFGKLLT 252
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQ+ENGTVTAGNASTLNDG+AA +L T + +K N KPLAR++ + DAATEPIDFPIAP
Sbjct: 253 VFQRENGTVTAGNASTLNDGSAALILTTADNAQKLNLKPLARVVGFQDAATEPIDFPIAP 312
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A AIPTLL+N G+ K D+ALWEINEAFSVVV+AN K LDIDP+KVNVHGGAVSLGHPIGM
Sbjct: 313 ALAIPTLLQNAGLNKNDIALWEINEAFSVVVVANQKLLDIDPAKVNVHGGAVSLGHPIGM 372
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARI++HL HALK+G+KG
Sbjct: 373 SGARIIVHLVHALKAGEKG 391
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350419060|ref|XP_003492057.1| PREDICTED: acetyl-CoA acetyltransferase, mitochondrial-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/319 (73%), Positives = 274/319 (85%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQA LGQAP RQA +FAGLPKST+CTTVNKVCASGMK+IMLASQ+L GHQ++++A
Sbjct: 76 MGNVCQASLGQAPARQATLFAGLPKSTICTTVNKVCASGMKSIMLASQSLQCGHQEIVLA 135
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVPFYL RGE KYGG+ L DGIV+DGL+DVYNK HMGNCAENTAKK NI+RDE
Sbjct: 136 GGMESMSNVPFYLPRGEIKYGGIKLEDGIVFDGLTDVYNKFHMGNCAENTAKKLNITRDE 195
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SYK+SA AY N +F ++VPV +PQ++G DI+ NEDEEYKK+NF+KF L T
Sbjct: 196 QDRYAINSYKRSATAYANKIFQDELVPVPVPQKRGNPDIVFNEDEEYKKVNFDKFGKLNT 255
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNASTLNDGAAA +L T +K N KPLARIIA+ DAAT+PIDFP AP
Sbjct: 256 VFQKENGTVTAGNASTLNDGAAALILTTTVVAQKMNLKPLARIIAFQDAATDPIDFPTAP 315
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+F I LL+ G+ K D+ALWEINEAFSVVV+AN K LD+DP+ VN+HGGAVSLGHPIGM
Sbjct: 316 SFGISKLLEKTGLNKNDIALWEINEAFSVVVIANQKLLDLDPNTVNIHGGAVSLGHPIGM 375
Query: 301 SGARIVIHLCHALKSGQKG 319
SGAR+V+HL HALK+G+KG
Sbjct: 376 SGARLVVHLVHALKAGEKG 394
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|189234785|ref|XP_975008.2| PREDICTED: similar to acetyl-CoA acetyltransferase, mitochondrial [Tribolium castaneum] gi|270001523|gb|EEZ97970.1| hypothetical protein TcasGA2_TC000365 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 230/319 (72%), Positives = 278/319 (87%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQ G+GQAP RQA +FAG PKST+CTT+NKVCASGMK++MLA+Q+L GHQDV++A
Sbjct: 75 MGNVCQGGVGQAPARQATLFAGFPKSTICTTINKVCASGMKSVMLAAQSLQAGHQDVVLA 134
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+YL RG T YGG+NLIDGIV+DGL+DVYNK HMGNCAENTAKK I+R +
Sbjct: 135 GGMESMSNVPYYLKRGPTPYGGVNLIDGIVFDGLTDVYNKFHMGNCAENTAKKLGITRQQ 194
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD++A+SSYK+SA+AY +N F+S++V VS+PQ+KG+ D++ DEEYK+++F KF LAT
Sbjct: 195 QDDFAISSYKRSAEAYASNQFASELVSVSVPQKKGQPDLVFAADEEYKRVDFNKFSKLAT 254
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQ+ENGTVTAGNASTLNDGAAA VL + +A ++ NAKPLAR++ + D A +PIDFPIAP
Sbjct: 255 VFQRENGTVTAGNASTLNDGAAALVLTSADAAKRLNAKPLARVVGFEDGACDPIDFPIAP 314
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A AIP LL N GV K+DVALWEINEAFSVVVLAN + LDIDP+KVNVHGGAVSLGHPIGM
Sbjct: 315 AVAIPRLLSNTGVKKEDVALWEINEAFSVVVLANQQLLDIDPAKVNVHGGAVSLGHPIGM 374
Query: 301 SGARIVIHLCHALKSGQKG 319
SGAR+++HL HALK GQKG
Sbjct: 375 SGARLIVHLVHALKPGQKG 393
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340708906|ref|XP_003393058.1| PREDICTED: acetyl-CoA acetyltransferase, mitochondrial-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/319 (73%), Positives = 273/319 (85%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVCQA LGQAP RQA +FAGLPKST+CTTVNKVCASGMK+IMLASQ+L GHQ++++A
Sbjct: 76 MGNVCQAALGQAPARQATLFAGLPKSTICTTVNKVCASGMKSIMLASQSLQCGHQEIVLA 135
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVPFYL RGE KYGG L DGIV+DGL+DVYNK HMGNCAENTAKK NI+RDE
Sbjct: 136 GGMESMSNVPFYLPRGEIKYGGTKLEDGIVFDGLTDVYNKFHMGNCAENTAKKLNITRDE 195
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SYK+SA AY N +F ++VPV +PQ++G DI+ NEDEEYKK+NF+KF L T
Sbjct: 196 QDRYAINSYKRSATAYANKIFQDELVPVPVPQKRGNPDIVFNEDEEYKKVNFDKFGKLNT 255
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNASTLNDGAAA +L T +K N KPLAR+IA+ DAAT+PIDFP AP
Sbjct: 256 VFQKENGTVTAGNASTLNDGAAALILTTTVVAQKMNLKPLARVIAFQDAATDPIDFPTAP 315
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+F I LL+ G+ K D+ALWEINEAFSVVV+AN K LD+DP+ VN+HGGAVSLGHPIGM
Sbjct: 316 SFGISKLLEKTGLNKNDIALWEINEAFSVVVIANQKLLDLDPNTVNIHGGAVSLGHPIGM 375
Query: 301 SGARIVIHLCHALKSGQKG 319
SGAR+V+HL HALK+G+KG
Sbjct: 376 SGARLVVHLVHALKAGEKG 394
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357613543|gb|EHJ68573.1| putative acetyl-CoA acetyltransferase, mitochondrial [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/319 (73%), Positives = 271/319 (84%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNVC A LGQAP RQAVIF G+PKST+CTTVNKVC+SGMK+IMLA+Q L G Q+VM+A
Sbjct: 86 MGNVCAAYLGQAPARQAVIFGGMPKSTICTTVNKVCSSGMKSIMLAAQGLQTGAQEVMLA 145
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVPFYL RGET YGGM L+DGIVYDGL+DVYNK HMGNCAENTAKK ISR E
Sbjct: 146 GGMESMSNVPFYLKRGETSYGGMQLVDGIVYDGLTDVYNKFHMGNCAENTAKKLGISRQE 205
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD+YA+SSYK+SA AY++ F +++PVS+PQ++G ++ +EDEEYKK+NFEKF L+T
Sbjct: 206 QDDYAISSYKRSAAAYESKAFVDELIPVSVPQKRGAPPVLFSEDEEYKKVNFEKFNKLST 265
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTAGNASTLNDGAAA VLMT EA + N KPLARII + D +PIDFPIAP
Sbjct: 266 VFQKENGTVTAGNASTLNDGAAALVLMTAEAAHRLNVKPLARIIGFADGECDPIDFPIAP 325
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A AIP LL+ GV K D+ALWEINEAFSVV +AN K L++DPSK+NVHGG VSLGHPIGM
Sbjct: 326 AVAIPKLLEKTGVNKDDIALWEINEAFSVVAVANQKMLNLDPSKLNVHGGGVSLGHPIGM 385
Query: 301 SGARIVIHLCHALKSGQKG 319
SG+RIV+HLCHALK G+KG
Sbjct: 386 SGSRIVVHLCHALKKGEKG 404
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| FB|FBgn0029969 | 410 | CG10932 [Drosophila melanogast | 0.390 | 0.775 | 0.711 | 5.7e-123 | |
| MGI|MGI:87870 | 424 | Acat1 "acetyl-Coenzyme A acety | 0.394 | 0.757 | 0.701 | 1.5e-121 | |
| UNIPROTKB|Q29RZ0 | 422 | ACAT1 "Acetyl-CoA acetyltransf | 0.394 | 0.760 | 0.692 | 6e-119 | |
| UNIPROTKB|I3LP02 | 428 | ACAT1 "Uncharacterized protein | 0.394 | 0.75 | 0.698 | 9.8e-119 | |
| RGD|2016 | 424 | Acat1 "acetyl-CoA acetyltransf | 0.394 | 0.757 | 0.692 | 3.3e-118 | |
| UNIPROTKB|F1PC58 | 416 | ACAT1 "Uncharacterized protein | 0.394 | 0.771 | 0.686 | 4.2e-118 | |
| UNIPROTKB|J9JHD4 | 433 | ACAT1 "Uncharacterized protein | 0.394 | 0.741 | 0.686 | 4.2e-118 | |
| UNIPROTKB|P24752 | 427 | ACAT1 "Acetyl-CoA acetyltransf | 0.394 | 0.751 | 0.677 | 1.5e-115 | |
| UNIPROTKB|E1C0Q5 | 409 | ACAT1 "Uncharacterized protein | 0.390 | 0.777 | 0.689 | 2.8e-114 | |
| ZFIN|ZDB-GENE-040808-68 | 420 | acat1 "acetyl-Coenzyme A acety | 0.390 | 0.757 | 0.673 | 1.1e-112 |
| FB|FBgn0029969 CG10932 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
Identities = 227/319 (71%), Positives = 269/319 (84%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV AGLGQAP RQA IFAGLP + CTTVNKVC+SGMKA+ML +Q+L LG+ DV+VA
Sbjct: 74 MGNVVSAGLGQAPARQAAIFAGLPTNVCCTTVNKVCSSGMKAVMLGAQSLMLGYADVVVA 133
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+YL RG T YGG+NL DGIV+DGL DVYNK HMGNCAENTAKK I+R +
Sbjct: 134 GGMESMSNVPYYLKRGATPYGGVNLTDGIVFDGLWDVYNKFHMGNCAENTAKKLEITRQQ 193
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD++A+ SYK+SA A+ N VF +I PV I Q+K K +I+++EDEEYK++NF+KF LAT
Sbjct: 194 QDDFAIESYKRSAAAWANKVFQDEIAPVKI-QQKRKPEIVISEDEEYKRVNFDKFGQLAT 252
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQ+ENGTVTAGNASTLNDG AA VLM+ EA +K KPLARI+A+ DA T+PIDFPIAP
Sbjct: 253 VFQRENGTVTAGNASTLNDGGAAVVLMSAEAAQKAGIKPLARIVAFQDAETDPIDFPIAP 312
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A AIP LLK GV K+DVA+WE+NEAFS+VVLANIKKLD+DP+KVNVHGGAVS+GHPIGM
Sbjct: 313 ALAIPKLLKRAGVRKEDVAMWEVNEAFSLVVLANIKKLDVDPAKVNVHGGAVSIGHPIGM 372
Query: 301 SGARIVIHLCHALKSGQKG 319
SGAR+V HL H+LK G+ G
Sbjct: 373 SGARLVAHLSHSLKKGELG 391
|
|
| MGI|MGI:87870 Acat1 "acetyl-Coenzyme A acetyltransferase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1178 (419.7 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
Identities = 226/322 (70%), Positives = 265/322 (82%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQA + AGLP ST CTTVNKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 88 MGNVIQGGEGQAPTRQATLGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVA 147
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NISR E
Sbjct: 148 GGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNISRQE 207
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YALSSY +S +A+ F+S+I P++I KGK D++V EDEEYK+++F K L T
Sbjct: 208 QDTYALSSYTRSKEAWDAGKFASEITPITISV-KGKPDVVVKEDEEYKRVDFSKVPKLKT 266
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGT+TA NASTLNDGAAA VLMT EA ++ N KPLARI A+ DAA +PIDFP+AP
Sbjct: 267 VFQKENGTITAANASTLNDGAAALVLMTAEAAQRLNVKPLARIAAFADAAVDPIDFPLAP 326
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK G+ K+D+A+WE+NEAFSVVVLANIK L+IDP KVN+HGGAVSLGHPIGM
Sbjct: 327 AYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNIHGGAVSLGHPIGM 386
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+H+ HALK G+ G S
Sbjct: 387 SGARIVVHMAHALKPGEFGLAS 408
|
|
| UNIPROTKB|Q29RZ0 ACAT1 "Acetyl-CoA acetyltransferase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 223/322 (69%), Positives = 266/322 (82%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ L GHQDVMVA
Sbjct: 86 MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQNLMCGHQDVMVA 145
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ +NRG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NI+R+E
Sbjct: 146 GGMESMSNVPYVMNRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLNITREE 205
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YAL+SY +S A++ F +++VPV+I KGK D++V EDEEYK+++F K L T
Sbjct: 206 QDTYALNSYTRSKAAWEAGRFGNEVVPVTITV-KGKPDVVVKEDEEYKRVDFSKIPKLKT 264
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQ+ENGTVTA NASTLNDGAAA VLMT +A ++ N KPLARI A+ DAA EPIDFP+AP
Sbjct: 265 VFQRENGTVTAANASTLNDGAAAVVLMTADAAKRLNVKPLARIAAFADAAVEPIDFPLAP 324
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK+ G+ K+D+ +WE+NEAFSVVVLANIK L++DP KVN++GGAVSLGHPIGM
Sbjct: 325 AYAVPKVLKDAGLKKEDITMWEVNEAFSVVVLANIKMLEMDPQKVNINGGAVSLGHPIGM 384
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 385 SGARIVVHLAHALKQGEYGLAS 406
|
|
| UNIPROTKB|I3LP02 ACAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 225/322 (69%), Positives = 264/322 (81%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ L GHQDVMVA
Sbjct: 92 MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQNLMCGHQDVMVA 151
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NI RDE
Sbjct: 152 GGMESMSNVPYVMDRGTTPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLNIPRDE 211
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SY +S A++ F S+++PV+I KGK D +V EDEEYK+++F K L T
Sbjct: 212 QDTYAINSYTRSKAAWEAGKFRSEVIPVTISV-KGKPDTVVKEDEEYKRVDFNKVPKLKT 270
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT +A ++ N KPLARI A+ DAA +PIDFPIAP
Sbjct: 271 VFQKENGTVTAANASTLNDGAAAVVLMTADAAKRLNVKPLARIAAFADAAVDPIDFPIAP 330
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK+ G+ K+DV +WE+NEAFSVVVLANIK L+IDP KVN++GGAVSLGHPIGM
Sbjct: 331 AYAVPKVLKDAGLKKEDVTMWEVNEAFSVVVLANIKMLEIDPQKVNINGGAVSLGHPIGM 390
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 391 SGARIVVHLAHALKQGEYGLAS 412
|
|
| RGD|2016 Acat1 "acetyl-CoA acetyltransferase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
Identities = 223/322 (69%), Positives = 265/322 (82%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQA + AGLP +T CTTVNKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 88 MGNVIQGGEGQAPTRQATLGAGLPIATPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVA 147
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK +ISR+E
Sbjct: 148 GGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLSISREE 207
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD+YA+ SY +S +A+ F+++I P++I KGK D++V EDEEYK+++F K L T
Sbjct: 208 QDKYAIGSYTRSKEAWDAGKFANEITPITISV-KGKPDVVVKEDEEYKRVDFSKVPKLKT 266
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT EA ++ KPLARI A+ DAA +PIDFP+AP
Sbjct: 267 VFQKENGTVTAANASTLNDGAAAVVLMTAEAAQRLKVKPLARIAAFADAAVDPIDFPLAP 326
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +LK G+ K+D+A+WE+NEAFSVVVLANIK L+IDP KVNVHGGAVSLGHPIGM
Sbjct: 327 AYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNVHGGAVSLGHPIGM 386
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 387 SGARIVVHLAHALKQGEFGLAS 408
|
|
| UNIPROTKB|F1PC58 ACAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 221/322 (68%), Positives = 265/322 (82%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQA + AGLP ST CTTVNKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 80 MGNVLQGGEGQAPTRQAALGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVA 139
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NI+R+E
Sbjct: 140 GGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNITREE 199
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YALSSY +S A++ F S+++PV++ KGK D++V EDEEYK+++F K L T
Sbjct: 200 QDTYALSSYTRSKAAWEAGRFGSEVIPVTVTT-KGKPDVLVTEDEEYKRVDFSKVPKLKT 258
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT +A R+ KPLAR+ A+ DAA EPIDFP+AP
Sbjct: 259 VFQKENGTVTAANASTLNDGAAAVVLMTADAARRLKVKPLARVAAFADAAVEPIDFPVAP 318
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +L++ G+ K+D+ +WE+NEAFS+VVLANIK LD+DP KVN++GGAVSLGHPIGM
Sbjct: 319 AYAVPKVLRDAGLKKEDITMWEVNEAFSLVVLANIKMLDLDPQKVNMNGGAVSLGHPIGM 378
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 379 SGARIVVHLVHALKQGEYGLAS 400
|
|
| UNIPROTKB|J9JHD4 ACAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 221/322 (68%), Positives = 265/322 (82%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQA + AGLP ST CTTVNKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 97 MGNVLQGGEGQAPTRQAALGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVA 156
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+ L D IV DGL+DVYNKIHMGNCAENTAKK NI+R+E
Sbjct: 157 GGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNITREE 216
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YALSSY +S A++ F S+++PV++ KGK D++V EDEEYK+++F K L T
Sbjct: 217 QDTYALSSYTRSKAAWEAGRFGSEVIPVTVTT-KGKPDVLVTEDEEYKRVDFSKVPKLKT 275
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT +A R+ KPLAR+ A+ DAA EPIDFP+AP
Sbjct: 276 VFQKENGTVTAANASTLNDGAAAVVLMTADAARRLKVKPLARVAAFADAAVEPIDFPVAP 335
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A+A+P +L++ G+ K+D+ +WE+NEAFS+VVLANIK LD+DP KVN++GGAVSLGHPIGM
Sbjct: 336 AYAVPKVLRDAGLKKEDITMWEVNEAFSLVVLANIKMLDLDPQKVNMNGGAVSLGHPIGM 395
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV+HL HALK G+ G S
Sbjct: 396 SGARIVVHLVHALKQGEYGLAS 417
|
|
| UNIPROTKB|P24752 ACAT1 "Acetyl-CoA acetyltransferase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 218/322 (67%), Positives = 264/322 (81%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 91 MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVA 150
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ +NRG T YGG+ L D IV DGL+DVYNKIHMG+CAENTAKK NI+R+E
Sbjct: 151 GGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNE 210
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SY +S A++ F ++++PV++ KG+ D++V EDEEYK+++F K L T
Sbjct: 211 QDAYAINSYTRSKAAWEAGKFGNEVIPVTVTV-KGQPDVVVKEDEEYKRVDFSKVPKLKT 269
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT +A ++ N PLARI+A+ DAA EPIDFPIAP
Sbjct: 270 VFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAP 329
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+A +LK+ G+ K+D+A+WE+NEAFS+VVLANIK L+IDP KVN++GGAVSLGHPIGM
Sbjct: 330 VYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGM 389
Query: 301 SGARIVIHLCHALKSGQKGQLS 322
SGARIV HL HALK G+ G S
Sbjct: 390 SGARIVGHLTHALKQGEYGLAS 411
|
|
| UNIPROTKB|E1C0Q5 ACAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 220/319 (68%), Positives = 257/319 (80%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQAP RQAV+ AGLP ST TTVNKVCASGMK+IM+A+Q+L G QDVMVA
Sbjct: 73 MGNVLQAGQGQAPARQAVLGAGLPISTDTTTVNKVCASGMKSIMMAAQSLMCGSQDVMVA 132
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ ++RG T YGG+NL D IV DGL+DVYN IHMGNCAENTAKKF ISR+E
Sbjct: 133 GGMESMSNVPYTMSRGSTPYGGVNLEDLIVKDGLTDVYNHIHMGNCAENTAKKFTISREE 192
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA+ SY KS A+ + + +IV V++ +KGK D V EDEEYK+++F K L
Sbjct: 193 QDTYAIGSYTKSKAAWDSGILKKEIVSVTV-SKKGKPDTEVTEDEEYKRVDFSKVPKLRA 251
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT EA ++ KPLARI+A+ DAA +PIDFPIAP
Sbjct: 252 VFQKENGTVTAANASTLNDGAAALVLMTTEAAKRLKVKPLARIVAFADAAVDPIDFPIAP 311
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
A A+P +L G+ K+D+A+WEINEAFSVVVLANIK L IDP KVN++GGAVSLGHPIGM
Sbjct: 312 AHAVPKILSETGLKKEDIAMWEINEAFSVVVLANIKMLGIDPQKVNINGGAVSLGHPIGM 371
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV+H+ HALK GQ G
Sbjct: 372 SGARIVVHMVHALKPGQYG 390
|
|
| ZFIN|ZDB-GENE-040808-68 acat1 "acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 215/319 (67%), Positives = 257/319 (80%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQAP RQA++ AGLP ST TT+NKVCASGMK+IMLASQ+L GHQDVMVA
Sbjct: 84 MGNVLQAGEGQAPTRQALLGAGLPLSTPATTINKVCASGMKSIMLASQSLMCGHQDVMVA 143
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMS VP+ + R YGG+ + D IV DGL+DVYNK HMGNCAENTAK +ISR+E
Sbjct: 144 GGMESMSQVPYIMAREAPPYGGVKMEDLIVKDGLTDVYNKFHMGNCAENTAKNSSISREE 203
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A+ SY S A+++ + + ++VPVSIPQR GK D++V EDEEY+K++F K L
Sbjct: 204 QDAFAIKSYTLSKAAWESGILAKEVVPVSIPQR-GKPDVVVKEDEEYRKVDFSKVPKLKA 262
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VF KENGTVTA NASTLNDGAAA VLMT +A ++ N PLA+I+A+ DAA PIDFPIAP
Sbjct: 263 VFLKENGTVTAANASTLNDGAAALVLMTADAAQRLNVTPLAKIVAFADAAVAPIDFPIAP 322
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
AFA+P +LK G+ K+D+A+WEINEAFSVVVLANIK LDIDP +VN++GGAVSLGHPIGM
Sbjct: 323 AFAVPKVLKAAGIKKEDIAMWEINEAFSVVVLANIKMLDIDPDRVNINGGAVSLGHPIGM 382
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV H+ H LKSGQ G
Sbjct: 383 SGARIVGHMVHNLKSGQYG 401
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P41338 | THIL_YEAST | 2, ., 3, ., 1, ., 9 | 0.5078 | 0.3857 | 0.7889 | yes | N/A |
| P17764 | THIL_RAT | 2, ., 3, ., 1, ., 9 | 0.6925 | 0.3943 | 0.7570 | yes | N/A |
| Q8QZT1 | THIL_MOUSE | 2, ., 3, ., 1, ., 9 | 0.7018 | 0.3943 | 0.7570 | yes | N/A |
| P24752 | THIL_HUMAN | 2, ., 3, ., 1, ., 9 | 0.6802 | 0.3906 | 0.7447 | yes | N/A |
| Q6L8K7 | THIL_YARLI | 2, ., 3, ., 1, ., 9 | 0.5517 | 0.3869 | 0.7934 | yes | N/A |
| Q5BKN8 | THIL_XENTR | 2, ., 3, ., 1, ., 9 | 0.6802 | 0.3906 | 0.7571 | yes | N/A |
| Q6AZA0 | THIL_DANRE | 2, ., 3, ., 1, ., 9 | 0.6739 | 0.3906 | 0.7571 | yes | N/A |
| Q8S4Y1 | THIC1_ARATH | 2, ., 3, ., 1, ., 9 | 0.5238 | 0.3845 | 0.7766 | yes | N/A |
| Q9UQW6 | THIL_SCHPO | 2, ., 3, ., 1, ., 9 | 0.5238 | 0.3832 | 0.7898 | yes | N/A |
| Q86AD9 | THIL1_DICDI | 2, ., 3, ., 1, ., 9 | 0.5331 | 0.3845 | 0.7560 | yes | N/A |
| Q29RZ0 | THIL_BOVIN | 2, ., 3, ., 1, ., 9 | 0.6925 | 0.3943 | 0.7606 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1.9 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.3.1 | 0.691 |
| 3rd Layer | 2.1.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 814 | |||
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 1e-149 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 1e-144 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 1e-133 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 1e-128 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-127 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-124 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 1e-117 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-113 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 1e-113 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-106 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 1e-102 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 7e-92 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 2e-89 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 3e-87 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 5e-83 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 8e-83 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 7e-82 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 7e-80 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 2e-76 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 5e-76 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 4e-74 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 4e-73 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 3e-72 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 2e-71 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 3e-71 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 2e-70 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 2e-67 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 5e-67 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 2e-65 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 4e-64 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 9e-64 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 1e-63 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 2e-63 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 1e-62 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 2e-61 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 8e-61 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 2e-58 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 4e-58 | |
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 2e-57 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 3e-56 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 2e-54 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 3e-53 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 5e-52 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 5e-51 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 6e-50 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 3e-49 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 1e-48 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 4e-48 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 2e-47 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 5e-46 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 2e-44 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 5e-44 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 7e-44 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 2e-42 | |
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 1e-41 | |
| pfam10237 | 161 | pfam10237, N6-adenineMlase, Probable N6-adenine me | 4e-40 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 2e-39 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 7e-39 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 1e-38 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 1e-38 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 3e-38 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 4e-38 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 2e-36 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 2e-35 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 3e-35 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 7e-35 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 3e-33 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 5e-32 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 1e-31 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 2e-31 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 2e-28 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 4e-27 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 2e-26 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 2e-20 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 4e-12 | |
| pfam10237 | 161 | pfam10237, N6-adenineMlase, Probable N6-adenine me | 3e-10 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-09 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 5e-08 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 6e-08 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 1e-05 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 2e-05 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 9e-05 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 9e-05 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-04 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 3e-04 | |
| PRK06157 | 398 | PRK06157, PRK06157, acetyl-CoA acetyltransferase; | 0.002 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.002 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.002 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 0.002 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 0.002 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 0.003 | |
| PRK06059 | 399 | PRK06059, PRK06059, lipid-transfer protein; Provis | 0.003 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 442 bits (1140), Expect = e-149
Identities = 159/316 (50%), Positives = 215/316 (68%), Gaps = 5/316 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQ P RQA + AGLP+S TTVN+VC SG++A+ LA+Q+++ G DV+VA
Sbjct: 49 MGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVA 108
Query: 61 GGMESMSNVPFYLNRGETKY-GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GG+ESMS P+ L + G+N +DG++ DGL+D + + MG AEN A+K+ ISR+
Sbjct: 109 GGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISRE 168
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSL 178
EQDE+AL S++++A A + F +IVPV +P RKG ++V+ DE + EK L
Sbjct: 169 EQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKG--PVVVDRDEGPRPDTTLEKLAKL 226
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F K++GTVTAGNAS +NDGAAA +LM+EE ++ KPLARI+ Y A +P I
Sbjct: 227 KPAF-KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGI 285
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P AIP LK G+ D+ L EINEAF+ LA +K+L +DP KVNV+GGA++LGHP+
Sbjct: 286 GPVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPL 345
Query: 299 GMSGARIVIHLCHALK 314
G SGARIV+ L H LK
Sbjct: 346 GASGARIVVTLLHELK 361
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 429 bits (1104), Expect = e-144
Identities = 170/317 (53%), Positives = 222/317 (70%), Gaps = 2/317 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV A LGQAP RQA + AGLP ST+CTTVNKVCASGMKA+MLA+Q++ LG DV+VA
Sbjct: 52 FGNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVA 111
Query: 61 GGMESMSNVPFYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GGMESMSN P YL R ++ G ++DG++ DGL DVYN MG CAE A +++ISR
Sbjct: 112 GGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISR 171
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSL 178
+EQD YA+ SY+++ A + F+ +IVPV +P +G+ +IV++DE K + K + L
Sbjct: 172 EEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F+++ G+VTAGNAS+++DGAAA VL++ E + + +A+I Y DAA P F
Sbjct: 232 RPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTT 291
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
APA AIP LK+ G+ V +EINEAFSVV LAN K L +DP KVNVHGGAVSLGHPI
Sbjct: 292 APALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPI 351
Query: 299 GMSGARIVIHLCHALKS 315
G SGARI++ L L+S
Sbjct: 352 GCSGARILVTLLGVLRS 368
|
Length = 394 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-133
Identities = 160/314 (50%), Positives = 220/314 (70%), Gaps = 3/314 (0%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IV +RTP+G F SL SLSAT+LG++AI++A+++A +D + VQEV+ GNV A LG
Sbjct: 2 DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLG 61
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
QAP RQA + AGLP ST+CTTVNKVCASGMKA+MLA+Q++ LG DV+VAGGMESMSN P
Sbjct: 62 QAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAP 121
Query: 499 FYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
YL R ++ G ++DG++ DGL DVYN MG CAE A +++ISR+EQD YA+ S
Sbjct: 122 KYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQS 181
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
Y+++ A + F+ +IVPV +P +G+ +IV++DE K + K + L F+++ G+
Sbjct: 182 YERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGS 241
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTAGNAS+++DGAAA VL++ E + + +A+I Y DAA P F APA AIP L
Sbjct: 242 VTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKAL 301
Query: 677 KNGG-QLSQFWYDE 689
K+ G + SQ Y E
Sbjct: 302 KHAGLEASQVDYYE 315
|
Length = 394 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 388 bits (1000), Expect = e-128
Identities = 141/299 (47%), Positives = 197/299 (65%), Gaps = 5/299 (1%)
Query: 381 FIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQA 440
IVS RTP+G F +L +SA LGA I++ +++A +D +V +V MGNV QAG GQ
Sbjct: 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQN 60
Query: 441 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY 500
P RQA + AGLP+S TTVN+VC SG++A+ LA+Q+++ G DV+VAGG+ESMS P+
Sbjct: 61 PARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYL 120
Query: 501 LNRGETKY-GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKK 559
L + G+N +DG++ DGL+D + + MG AEN A+K+ ISR+EQDE+AL S+++
Sbjct: 121 LPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQR 180
Query: 560 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENGTVT 618
+A A + F +IVPV +P RKG ++V+ DE + EK L F K++GTVT
Sbjct: 181 AAAAQEAGRFKDEIVPVEVPGRKG--PVVVDRDEGPRPDTTLEKLAKLKPAF-KKDGTVT 237
Query: 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
AGNAS +NDGAAA +LM+EE ++ KPLARI+ Y A +P I P AIP LK
Sbjct: 238 AGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALK 296
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 385 bits (992), Expect = e-127
Identities = 159/323 (49%), Positives = 208/323 (64%), Gaps = 7/323 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV QAG Q RQA + AGLP+S TVN+ CASG++A++LA+Q + G DV+VA
Sbjct: 48 FGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVA 107
Query: 61 GGMESMSNVPFYLNRGET---KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNIS 117
GG+ESMS VP+ + R K G L D I+ DGL D N + MG AEN AKK+ IS
Sbjct: 108 GGVESMSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGIS 167
Query: 118 RDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFK 176
R+EQDEYAL S++++A A++ +F +IVPVS+ RKG ++V+ DE EK
Sbjct: 168 REEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKG--PVVVSSDEGIRPNTTLEKLA 225
Query: 177 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF 236
L F NGTVTAGN+S LNDGAAA +LM+EE ++ PLARI++Y A +P
Sbjct: 226 KLKPAF-DPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIM 284
Query: 237 PIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGH 296
+ P AIP LK G++ D+ L+EINEAF+ VLA IK+L +D KVNV+GGA++LGH
Sbjct: 285 GLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGH 344
Query: 297 PIGMSGARIVIHLCHALKSGQKG 319
P+G SGARIV L H LK
Sbjct: 345 PLGASGARIVTTLLHELKRRGGR 367
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-124
Identities = 152/317 (47%), Positives = 204/317 (64%), Gaps = 5/317 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MG V QAG GQ P RQA + AGLP T+NKVC SG+KA+ LA+Q + G D++VA
Sbjct: 53 MGQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVA 112
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG ESMS P L R K G + L+D +++DGL+D +N HMG AEN A+++ I+R
Sbjct: 113 GGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITR 172
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKS 177
+EQDE+AL+S +K+ A K F +IVPV+I QRKG ++V+ DE + E
Sbjct: 173 EEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAK 231
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F ++GTVTAGNAS +NDGAAA V+M+E ++ PLARI++Y A +P
Sbjct: 232 LRPAF-DKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMG 290
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
I P AI L+ G + D+ L EINEAF+ LA K+L +DP KVNV+GGA++LGHP
Sbjct: 291 IGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHP 350
Query: 298 IGMSGARIVIHLCHALK 314
IG SGARI++ L H +K
Sbjct: 351 IGASGARILVTLLHEMK 367
|
Length = 393 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 359 bits (923), Expect = e-117
Identities = 156/317 (49%), Positives = 203/317 (64%), Gaps = 5/317 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MG V Q G GQ P RQA AG+P TVNKVCASG++A+ LA Q + G V+VA
Sbjct: 53 MGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVA 112
Query: 61 GGMESMSNVPFYLNRGETKY--GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GGMESMSN P+ L Y G +ID +V DGL+ ++ +HMG AK+ ISR
Sbjct: 113 GGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISR 172
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
+ QDE+A S++++ A++ F +IVPV+IPQRKG I+V +DE +K EK
Sbjct: 173 EAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAK 231
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L VF K GT+TAGNA +NDGAAA VLM+E+ ++ KPLA I+A+ A E DFP
Sbjct: 232 LKPVFDKT-GTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFP 290
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
P +AI LL+ G +D+ L+EINEAF+ V LA+ + IDP KVNV+GGAV+LGHP
Sbjct: 291 RTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHP 350
Query: 298 IGMSGARIVIHLCHALK 314
IG SGARI++ L H LK
Sbjct: 351 IGASGARIIVTLIHELK 367
|
Length = 393 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 349 bits (899), Expect = e-113
Identities = 139/305 (45%), Positives = 192/305 (62%), Gaps = 5/305 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IVS +RTP+G F +L +SA +LGA+ I++A+++A + V EV MG V QAG G
Sbjct: 3 DVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAG 62
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA + AGLP T+NKVC SG+KA+ LA+Q + G D++VAGG ESMS P
Sbjct: 63 QNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAP 122
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
L R K G + L+D +++DGL+D +N HMG AEN A+++ I+R+EQDE+AL+S
Sbjct: 123 HVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALAS 182
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENG 615
+K+ A K F +IVPV+I QRKG ++V+ DE + E L F ++G
Sbjct: 183 QQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAKLRPAF-DKDG 240
Query: 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTL 675
TVTAGNAS +NDGAAA V+M+E ++ PLARI++Y A +P I P AI
Sbjct: 241 TVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKA 300
Query: 676 LKNGG 680
L+ G
Sbjct: 301 LEKAG 305
|
Length = 393 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 344 bits (885), Expect = e-113
Identities = 137/262 (52%), Positives = 176/262 (67%), Gaps = 2/262 (0%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IVS +RTP+GSF SL LSA LGA+AI++A+++A + DV EV MGNV QAG G
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA + AG+P S T+NKVC SG+KA+ LA+Q + G D++VAGG+ESMSN P
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ L R + G L+D ++ DGL+D +N IHMG AEN AKK+ ISR+EQDE+AL S
Sbjct: 121 YVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFALRS 180
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
+K+A A K F +IVPV+I RKGK ++ ++ E L F KENGT
Sbjct: 181 QQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTLESLAKLKPAFDKENGT 240
Query: 617 VTAGNASTLNDGAAACVLMTEE 638
VTAGNAS LNDGAAA +LM+E
Sbjct: 241 VTAGNASGLNDGAAAVLLMSES 262
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 330 bits (849), Expect = e-106
Identities = 138/300 (46%), Positives = 187/300 (62%), Gaps = 7/300 (2%)
Query: 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAP 441
IV+ +RTP+G F SL +SA LGA I+ +++ +D + +V GNV QAG Q
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 442 CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL 501
RQA + AGLP+S TVN+ CASG++A++LA+Q + G DV+VAGG+ESMS VP+ +
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 502 NRGET---KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYK 558
R K G L D I+ DGL D N + MG AEN AKK+ ISR+EQDEYAL S++
Sbjct: 121 PRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQ 180
Query: 559 KSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATVFQKENGTV 617
++A A++ +F +IVPVS+ RKG ++V+ DE EK L F NGTV
Sbjct: 181 RAAKAWEEGLFKDEIVPVSVKGRKG--PVVVSSDEGIRPNTTLEKLAKLKPAF-DPNGTV 237
Query: 618 TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
TAGN+S LNDGAAA +LM+EE ++ PLARI++Y A +P + P AIP LK
Sbjct: 238 TAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALK 297
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-102
Identities = 142/302 (47%), Positives = 189/302 (62%), Gaps = 5/302 (1%)
Query: 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAP 441
IVS +RTP G F SL + AT+LG +AI+ A+++AN+ DV+EV MG V Q G GQ P
Sbjct: 6 IVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIP 65
Query: 442 CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL 501
RQA AG+P TVNKVCASG++A+ LA Q + G V+VAGGMESMSN P+ L
Sbjct: 66 SRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYIL 125
Query: 502 NRGETKY--GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKK 559
Y G +ID +V DGL+ ++ +HMG AK+ ISR+ QDE+A S+++
Sbjct: 126 PGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQR 185
Query: 560 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENGTVT 618
+ A++ F +IVPV+IPQRKG I+V +DE +K EK L VF K GT+T
Sbjct: 186 AVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAKLKPVFDKT-GTIT 243
Query: 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKN 678
AGNA +NDGAAA VLM+E+ ++ KPLA I+A+ A E DFP P +AI LL+
Sbjct: 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK 303
Query: 679 GG 680
G
Sbjct: 304 TG 305
|
Length = 393 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 294 bits (753), Expect = 7e-92
Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 8/327 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MG V AG GQAP RQA + AGLP S CTTVNK+C SGM+A M A L G DV+VA
Sbjct: 58 MGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVA 117
Query: 61 GGMESMSNVPFYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIH-MGNCAENTAKKFNIS 117
GGMESM+N P+ L RG + G ++D + DGL D Y+K MG AE A ++ +
Sbjct: 118 GGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFT 177
Query: 118 RDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKS 177
R+ QD +A+ S ++ A ++ F+ +I PV++ +KG D +++ DE+ K N EK +
Sbjct: 178 REAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKG--DTVIDRDEQPFKANPEKIPT 235
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F K GTVTA N+S+++DGAAA V+M ++ PLAR++ + A P F
Sbjct: 236 LKPAFSK-TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFT 294
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
AP AI L + G +V L+EINEAF+VV +A +K+ + KVNV+GGA +LGHP
Sbjct: 295 TAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHP 354
Query: 298 IGMSGARIVIHLCHALKS--GQKGQLS 322
IG SGARI++ L AL++ G++G S
Sbjct: 355 IGASGARILVTLIGALRARGGKRGVAS 381
|
Length = 397 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 2e-89
Identities = 110/212 (51%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQ P RQA + AG+P S T+NKVC SG+KA+ LA+Q + G D++VA
Sbjct: 51 MGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVA 110
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG+ESMSN P+ L R + G L+D ++ DGL+D +N IHMG AEN AKK+ ISR
Sbjct: 111 GGVESMSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISR 170
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSL 178
+EQDE+AL S +K+A A K F +IVPV+I RKGK ++ ++ E L
Sbjct: 171 EEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTLESLAKL 230
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEE 210
F KENGTVTAGNAS LNDGAAA +LM+E
Sbjct: 231 KPAFDKENGTVTAGNASGLNDGAAAVLLMSES 262
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 281 bits (722), Expect = 3e-87
Identities = 128/303 (42%), Positives = 176/303 (58%), Gaps = 6/303 (1%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL- 73
R A I AG+P+ T VN++C SG++AI+ A+Q + LG DV + GG ESMS P+ L
Sbjct: 69 RVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLP 128
Query: 74 -NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKS 132
R + G L+D +V L D + IHMG AEN A K+ ISR+ QD AL S++++
Sbjct: 129 AARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDALALESHRRA 187
Query: 133 ADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTVTA 191
A A F QIVPV I RKG +++ + DE + E L VF+KENGTVTA
Sbjct: 188 AAAIAAGYFKDQIVPVEIKTRKG--EVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTA 245
Query: 192 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNG 251
GNAS +NDGAAA VL +A KPLAR++ Y A +P I P A L+
Sbjct: 246 GNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERA 305
Query: 252 GVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCH 311
G+ D+ + E NEAF+ A ++L +DP+KVN +G +SLGHP+G +GA I + +
Sbjct: 306 GLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALY 365
Query: 312 ALK 314
L+
Sbjct: 366 ELQ 368
|
Length = 394 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 5e-83
Identities = 128/304 (42%), Positives = 182/304 (59%), Gaps = 6/304 (1%)
Query: 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
+ I S +RTPM +F+ SL+A +LGA AI +A+++A + + EV MG V AG GQ
Sbjct: 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQ 68
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF 499
AP RQA + AGLP S CTTVNK+C SGM+A M A L G DV+VAGGMESM+N P+
Sbjct: 69 APARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPY 128
Query: 500 YL--NRGETKYGGMNLIDGIVYDGLSDVYNKIH-MGNCAENTAKKFNISRDEQDEYALSS 556
L RG + G ++D + DGL D Y+K MG AE A ++ +R+ QD +A+ S
Sbjct: 129 LLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAIES 188
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
++ A ++ F+ +I PV++ +KG D +++ DE+ K N EK +L F K GT
Sbjct: 189 LARAKRANEDGSFAWEIAPVTVAGKKG--DTVIDRDEQPFKANPEKIPTLKPAFSK-TGT 245
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTA N+S+++DGAAA V+M ++ PLAR++ + A P F AP AI L
Sbjct: 246 VTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLF 305
Query: 677 KNGG 680
+ G
Sbjct: 306 EKNG 309
|
Length = 397 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 269 bits (691), Expect = 8e-83
Identities = 124/320 (38%), Positives = 173/320 (54%), Gaps = 20/320 (6%)
Query: 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
+G V QAG GQ RQA + AGLP S TVN+ CASG+ A+ LA+Q ++ G DV++
Sbjct: 56 LGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVL 115
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
AGG+E MS+ P E + +D + D L D MG AE AK++ ISR+
Sbjct: 116 AGGVEKMSDAPMG---REGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISRE 172
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF----EKF 175
+QDE A+ S+K +A K F +I P + V D ++++ +
Sbjct: 173 DQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS------PVVAD-PLRRLDCSPTSDGA 224
Query: 176 KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID 235
+L F++ GTVTAGNAS +NDGAAA +LM+E ++ PLA I AY A +P
Sbjct: 225 AALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDP-S 283
Query: 236 FPIAPAFAIPTLL-KNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSL 294
P A+ L G +A +D+ L E EAF+ V L K L P VN GGA++L
Sbjct: 284 IMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIAL 341
Query: 295 GHPIGMSGARIVIHLCHALK 314
GHPIG +GARI++ L L+
Sbjct: 342 GHPIGATGARILVELARQLR 361
|
Length = 392 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 7e-82
Identities = 136/323 (42%), Positives = 191/323 (59%), Gaps = 5/323 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ P RQA I AGLP S T+NKVC SG+KA+ LA+Q + G +V++A
Sbjct: 53 LGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIA 112
Query: 61 GGMESMSNVPFYLNRGET--KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG E+MS P+ L T + G L+D ++ DGL D +N HMG AEN +K+ ISR
Sbjct: 113 GGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISR 172
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSL 178
+ QD +A +S +K+ A + F +I P+ IPQRKG+ +++ E L
Sbjct: 173 EAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKL 232
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F+K+ G+VTAGNAS+LNDGAAA +LM+ + LA+I AY +A +P I
Sbjct: 233 KPAFKKD-GSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGI 291
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P A L G + ++ L E NEAF+ LA K+L D +KVNV+GGA++LGHPI
Sbjct: 292 GPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPI 351
Query: 299 GMSGARIVIHLCHAL--KSGQKG 319
G SG R+++ L H + + +KG
Sbjct: 352 GASGCRVLVTLLHEMIRRDAKKG 374
|
Length = 393 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 7e-80
Identities = 126/310 (40%), Positives = 170/310 (54%), Gaps = 15/310 (4%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ---- 434
+V +VSG RT +G+F SL ++ T LGA + A+ +A +D V V G+V
Sbjct: 4 EVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPR 63
Query: 435 -AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
L R A I AG+P+ T VN++C SG++AI+ A+Q + LG DV + GG ES
Sbjct: 64 DMYLS----RVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAES 119
Query: 494 MSNVPFYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDE 551
MS P+ L R + G L+D +V L D + IHMG AEN A K+ ISR+ QD
Sbjct: 120 MSRAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 552 YALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVF 610
AL S++++A A F QIVPV I RKG +++ + DE + E L VF
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKTRKG--EVVFDTDEHVRADTTLEDLAKLKPVF 236
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
+KENGTVTAGNAS +NDGAAA VL +A KPLAR++ Y A +P I P
Sbjct: 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVP 296
Query: 671 AIPTLLKNGG 680
A L+ G
Sbjct: 297 ATQKALERAG 306
|
Length = 394 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 253 bits (646), Expect = 2e-76
Identities = 130/319 (40%), Positives = 200/319 (62%), Gaps = 5/319 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V G GQ P RQ +I AG+PK T+NKVC SG+K++ LA+ ++ G ++++A
Sbjct: 54 LGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIA 113
Query: 61 GGMESMS-NVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GG E+MS + R K+G + ++D + YDGL+DV++ + MG AEN +K+FNISR
Sbjct: 114 GGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQ 173
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 178
EQDE+ALSS+KK+A A +F +I+P+ + +K + + + DE + + E L
Sbjct: 174 EQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F K NG VTAGNAS++NDGAA ++++EEA++K N PLARI++Y A +P
Sbjct: 232 RPAFDK-NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGT 290
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
AP A L G + D+ + E+NEAF+ + +++ D KVN++GGA+++GHPI
Sbjct: 291 APVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPI 350
Query: 299 GMSGARIVIHLCHALKSGQ 317
G SG R++I L H L+ +
Sbjct: 351 GASGGRVLITLIHGLRRAK 369
|
Length = 392 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 5e-76
Identities = 127/309 (41%), Positives = 181/309 (58%), Gaps = 4/309 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IV+ +RT +GSF+ SL ++ A +LGA I +++ +D + V EV +G V AG G
Sbjct: 3 DVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAG 62
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA I AGLP S T+NKVC SG+KA+ LA+Q + G +V++AGG E+MS P
Sbjct: 63 QNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAP 122
Query: 499 FYLNRGET--KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ L T + G L+D ++ DGL D +N HMG AEN +K+ ISR+ QD +A +S
Sbjct: 123 YVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAAS 182
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
+K+ A + F +I P+ IPQRKG+ +++ E L F+K+ G+
Sbjct: 183 QQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKD-GS 241
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTAGNAS+LNDGAAA +LM+ + LA+I AY +A +P I P A L
Sbjct: 242 VTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCL 301
Query: 677 -KNGGQLSQ 684
K G L++
Sbjct: 302 DKAGWSLAE 310
|
Length = 393 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 4e-74
Identities = 121/313 (38%), Positives = 180/313 (57%), Gaps = 19/313 (6%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R + + AGLP S TT+N++C SGM A+ A++ + G ++M+AGG+ESMS PF +
Sbjct: 69 RMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMG 128
Query: 75 RGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAENTAKKFNISRDEQDEY 124
+ ++ + I +D + Y M AEN A+ +NISR +QD +
Sbjct: 129 KADSAFSRQAEI----FDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISRADQDAF 184
Query: 125 ALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQ 183
AL S +++A A + +IVPV+IPQ+KG ++V+ DE + E L VF
Sbjct: 185 ALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAKLKPVF- 242
Query: 184 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 243
+ +GTVTAGNAS +NDGAAA +L +E A +K P ARI+ A EP I PA A
Sbjct: 243 RPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPA 302
Query: 244 IPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVNVHGGAVSLGHPIGMS 301
LL G+ + E+NEAF+ LA +++L + D ++VN +GGA++LGHP+GMS
Sbjct: 303 TRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMS 362
Query: 302 GARIVIHLCHALK 314
GAR+V+ H L+
Sbjct: 363 GARLVLTALHQLE 375
|
Length = 401 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 4e-73
Identities = 132/322 (40%), Positives = 196/322 (60%), Gaps = 19/322 (5%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG+GQ P QA AGLP TVN VCASGM A+ A++ + LG +D+++A
Sbjct: 53 MGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIA 112
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLI-------DGIVYDGLSDVYNKIHMGNCAENTAKK 113
GGME+MSN PF L + ++G +L+ D ++ DGL D + HMG AE TA+K
Sbjct: 113 GGMENMSNAPFLLP-SDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARK 171
Query: 114 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFE 173
+ I+R+ DEY++ SY+++ A ++ F ++IVP + ++ DE +K E
Sbjct: 172 YGITREMADEYSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTME 221
Query: 174 KFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233
L F K NG +TAGN++ L+DG +A V+ +E+A+ ++ KP+ARI Y A+ +P
Sbjct: 222 DLAKLPPAFDK-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDP 280
Query: 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVS 293
+DF AP A LL+ + L E NEAFS+ + +L ID + NV+GGAV+
Sbjct: 281 LDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVA 340
Query: 294 LGHPIGMSGARIVIHLCHALKS 315
+GHPIG SG+RI++ L +ALK+
Sbjct: 341 IGHPIGNSGSRIIVTLINALKT 362
|
Length = 388 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 3e-72
Identities = 128/317 (40%), Positives = 189/317 (59%), Gaps = 20/317 (6%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV+IVS RT +G F S + A +LG AI++ I A +D + VQEV MGNV QAG+G
Sbjct: 3 DVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVG 62
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P QA AGLP TVN VCASGM A+ A++ + LG +D+++AGGME+MSN P
Sbjct: 63 QNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAP 122
Query: 499 FYLNRGETKYGGMNLI-------DGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDE 551
F L + ++G +L+ D ++ DGL D + HMG AE TA+K+ I+R+ DE
Sbjct: 123 FLLP-SDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181
Query: 552 YALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611
Y++ SY+++ A ++ F ++IVP + ++ DE +K E L F
Sbjct: 182 YSVQSYERAIRATESGEFRNEIVPFN----------DLDRDEGIRKTTMEDLAKLPPAFD 231
Query: 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 671
K NG +TAGN++ L+DG +A V+ +E+A+ ++ KP+ARI Y A+ +P+DF AP A
Sbjct: 232 K-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPA 290
Query: 672 IPTLLKNGGQLSQFWYD 688
LL+ + S +YD
Sbjct: 291 TRKLLEKQNK-SIDYYD 306
|
Length = 388 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 239 bits (612), Expect = 2e-71
Identities = 118/312 (37%), Positives = 183/312 (58%), Gaps = 9/312 (2%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R A + AGLP S TTVN++C SG+ AI +A++ + G D+++AGG+ESMS PF +
Sbjct: 68 RMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMG 127
Query: 75 RGETKYG-GMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 128
+ ++ + + D + + +Y M AEN A++F ISR++QD +AL S
Sbjct: 128 KADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISREDQDAFALRS 187
Query: 129 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 188
+++A A + F+ +IVPV IPQ+KG+ ++ ++ + E L V + +GT
Sbjct: 188 QQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVV-RPDGT 246
Query: 189 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 248
VTAGNAS +NDGAAA +L +EEAV++ P ARI+A A EP I P A LL
Sbjct: 247 VTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLL 306
Query: 249 KNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVNVHGGAVSLGHPIGMSGARIV 306
G++ + E+NEAF+ LA +++L + D ++VN +GGA++LGHP+G SGAR+V
Sbjct: 307 ARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLV 366
Query: 307 IHLCHALKSGQK 318
+ L+
Sbjct: 367 LTALRQLERSGG 378
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 3e-71
Identities = 116/308 (37%), Positives = 178/308 (57%), Gaps = 10/308 (3%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R +++ AGLP +T+N++C SGM A+ +A++ + G +M+AGG+ESMS PF +
Sbjct: 69 RMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMG 128
Query: 75 RGETKYGGMNLIDG------IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 128
+ E+ + I V + +Y M AEN A +N+SR +QD +AL S
Sbjct: 129 KAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQDAFALRS 188
Query: 129 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 188
+K+A A + + +IVPV+IPQ+KG ++V+ DE ++ E L V + +GT
Sbjct: 189 QQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLKGVV-RPDGT 246
Query: 189 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 248
VTAGNAS +NDGA A +L +E A R+ KP AR++ A EP I PA A LL
Sbjct: 247 VTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLL 306
Query: 249 KNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVNVHGGAVSLGHPIGMSGARIV 306
G+ + E+NEAF+ LA +++L + D ++VN +GGA++LGHP+G SGAR+V
Sbjct: 307 ARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLV 366
Query: 307 IHLCHALK 314
+ L+
Sbjct: 367 TTALYQLE 374
|
Length = 400 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 2e-70
Identities = 116/309 (37%), Positives = 165/309 (53%), Gaps = 20/309 (6%)
Query: 377 PGDVFIVSGSRTPMGSFRS-SLVSLSATKLGAVAIESAIQK--ANMDKSDVQEVYMGNVC 433
DV IV RTP G F SL L+A LGA I++ +++ A++D +DV +V +G V
Sbjct: 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60
Query: 434 QAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGME 492
QAG GQ RQA + AGLP S TVN+ CASG+ A+ LA+Q ++ G DV++AGG+E
Sbjct: 61 QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120
Query: 493 SMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEY 552
MS+ P E + +D + D L D MG AE AK++ ISR++QDE
Sbjct: 121 KMSDAPMG---REGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEV 177
Query: 553 ALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF----EKFKSLAT 608
A+ S+K +A K F +I P + V D ++++ + +L
Sbjct: 178 AVKSHKNAAANPKAGFF-DEITPEDVLNS------PVVAD-PLRRLDCSPTSDGAAALVP 229
Query: 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 668
F++ GTVTAGNAS +NDGAAA +LM+E ++ PLA I AY A +P P
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDP-SIMDGP 288
Query: 669 AFAIPTLLK 677
A+ L
Sbjct: 289 VAAVHDALT 297
|
Length = 392 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 2e-67
Identities = 117/324 (36%), Positives = 176/324 (54%), Gaps = 25/324 (7%)
Query: 10 GQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67
G+AP R A + AGLP + +++ C SG++A++ A+ + G DV++AGG ESMS
Sbjct: 60 GEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS 119
Query: 68 NVPFYLN--RGETKYGGMNLIDGIVYDGLSDV--------YNKIH-MGNCAENTAKKFNI 116
NV FY R + GG+ L +D L+ + M AEN +++ I
Sbjct: 120 NVEFYTTDMRWGVRGGGVQL-----HDRLARGRETAGGRRFPVPGGMIETAENLRREYGI 174
Query: 117 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKF 175
SR+EQD A+ S++++ A + F +IVPV++PQRKG +V+ DE + E
Sbjct: 175 SREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKG-DPTVVDRDEHPRADTTLESL 233
Query: 176 KSLATVFQK--ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233
L + K TVTAGNAS ND AAAC++ TE+ + +PLAR++++ A EP
Sbjct: 234 AKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEP 293
Query: 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI---DPSKVNVHGG 290
I P A L G+ D+ L E+NEAF+ VLA +K+ D ++NV+G
Sbjct: 294 SRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGS 353
Query: 291 AVSLGHPIGMSGARIVIHLCHALK 314
+SLGHP+G +G RI+ L L+
Sbjct: 354 GISLGHPVGATGGRILATLLRELQ 377
|
Length = 404 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 5e-67
Identities = 123/303 (40%), Positives = 182/303 (60%), Gaps = 5/303 (1%)
Query: 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
V+I RT GSF SL + A L A I+ +Q + +D + V EV +G V G GQ
Sbjct: 5 VYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQ 64
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS-NVP 498
P RQ +I AG+PK T+NKVC SG+K++ LA+ ++ G ++++AGG E+MS +
Sbjct: 65 NPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMH 124
Query: 499 FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYK 558
R K+G + ++D + YDGL+DV++ + MG AEN +K+FNISR EQDE+ALSS+K
Sbjct: 125 GSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSSHK 184
Query: 559 KSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTV 617
K+A A +F +I+P+ + +K + + + DE + + E L F K NG V
Sbjct: 185 KAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKLRPAFDK-NGVV 241
Query: 618 TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
TAGNAS++NDGAA ++++EEA++K N PLARI++Y A +P AP A L
Sbjct: 242 TAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALS 301
Query: 678 NGG 680
G
Sbjct: 302 KAG 304
|
Length = 392 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 2e-65
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 20/321 (6%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL 437
+ FI RTP+G + +L S+ A LGAV +++ + + +D V +V G QAG
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGE 62
Query: 438 -GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+ R + + AGLP S TT+N++C SGM A+ A++ + G ++M+AGG+ESMS
Sbjct: 63 DNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSR 122
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAENTAKKFNISR 546
PF + + ++ + I +D + Y M AEN A+ +NISR
Sbjct: 123 APFVMGKADSAFSRQAEI----FDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISR 178
Query: 547 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 605
+QD +AL S +++A A + +IVPV+IPQ+KG ++V+ DE + E
Sbjct: 179 ADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAK 237
Query: 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 665
L VF + +GTVTAGNAS +NDGAAA +L +E A +K P ARI+ A EP
Sbjct: 238 LKPVF-RPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMG 296
Query: 666 IAPAFAIPTLLKNGG-QLSQF 685
I PA A LL G + QF
Sbjct: 297 IGPAPATRKLLARLGLTIDQF 317
|
Length = 401 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 219 bits (560), Expect = 4e-64
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 27/315 (8%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
RQ + AGLP + TVN+ C+SG++ I LA+Q + G DV VAGG+ES+S V +N
Sbjct: 69 RQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMN 128
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
R L +G + + ++Y M AEN AK++ IS++ QDEY + S +++A
Sbjct: 129 R-------HMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAA 179
Query: 135 AYKNNVFSSQIVPVSIPQRKGKAD----------IIVNEDEEYKK-INFEKFKSLATVFQ 183
A F +IVP+++ G AD + V+ DE + E + +
Sbjct: 180 AQAAGRFDDEIVPITV--TAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL- 236
Query: 184 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 243
G +TAGNAS +DGA+ACV+M + + +PL + A EP + I P FA
Sbjct: 237 -PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFA 295
Query: 244 IPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGA 303
+P LLK G+ D+ LWE+NEAF+V VL L I ++NV+GGA+++GHP G+SGA
Sbjct: 296 VPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGA 355
Query: 304 RIVIHLCHALKSGQK 318
R+ HAL G++
Sbjct: 356 RLT---GHALIEGKR 367
|
Length = 392 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 9e-64
Identities = 113/316 (35%), Positives = 175/316 (55%), Gaps = 11/316 (3%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL 437
+ FI RTP+G + +L S+ A LGAV +++ +++ ++D + + +V G QAG
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGE 62
Query: 438 -GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+ R +++ AGLP +T+N++C SGM A+ +A++ + G +M+AGG+ESMS
Sbjct: 63 DNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSR 122
Query: 497 VPFYLNRGETKYGGMNLIDG------IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
PF + + E+ + I V + +Y M AEN A +N+SR +QD
Sbjct: 123 APFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQD 182
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610
+AL S +K+A A + + +IVPV+IPQ+KG ++V+ DE ++ E L V
Sbjct: 183 AFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLKGVV 241
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
+ +GTVTAGNAS +NDGA A +L +E A R+ KP AR++ A EP I PA
Sbjct: 242 -RPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAP 300
Query: 671 AIPTLLKNGGQ-LSQF 685
A LL G L QF
Sbjct: 301 ATQKLLARLGMTLDQF 316
|
Length = 400 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (556), Expect = 1e-63
Identities = 104/302 (34%), Positives = 169/302 (55%), Gaps = 25/302 (8%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R + A LP + V++ CAS + + + + ++ G D+++AGG+E M+ P N
Sbjct: 74 RHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDN 133
Query: 75 ---------RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 125
+ KY +L G V MG AE A++ I R+E D ++
Sbjct: 134 PHIEPNPKLLTDPKYIEYDLTTGYV------------MGLTAEKLAEEAGIKREEMDRWS 181
Query: 126 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQK 184
L S++ +A A + F +I+P+ + + +GK +V+ D+ + + EK L F K
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEV-EVEGK-KKVVDVDQSVRPDTSLEKLAKLPPAF-K 238
Query: 185 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAI 244
+G +TAGN+S LN GA+ +LM+++AV+K+ KP+A+I ++ A P P A
Sbjct: 239 PDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPAS 298
Query: 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGAR 304
L+ G++ +D+ LWEINEAF+VVVL IK+L +DP VN+ GGA+++GHP+G +GAR
Sbjct: 299 KKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGAR 358
Query: 305 IV 306
IV
Sbjct: 359 IV 360
|
Length = 394 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 2e-63
Identities = 115/313 (36%), Positives = 175/313 (55%), Gaps = 18/313 (5%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R + AGLP S TVN+ CASG++A+ +A+ + +G DVM+A G+ESMS VP
Sbjct: 74 RIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMM-- 131
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
G + ++ +V MG AE A+++ +SR++QD +AL S++K+
Sbjct: 132 ------GNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIA 185
Query: 135 AYKNNVFSSQIVPVSIPQRK-----GKADI---IVNEDEEYKK-INFEKFKSLATVFQKE 185
A + F +I P I +R G+ D+ V+ DE + + E L VF +
Sbjct: 186 AQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANK 245
Query: 186 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIP 245
G+VTAGN+S +DGA A +L++E+A+++FN PLAR +++ A P I P AIP
Sbjct: 246 -GSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIP 304
Query: 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARI 305
LK G+ + D+ E+NEAF+ LA I+ L +DPSKVN GGA++LGHP+G +GA
Sbjct: 305 AALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIR 364
Query: 306 VIHLCHALKSGQK 318
+ H L+
Sbjct: 365 TATVVHGLRRTNL 377
|
Length = 399 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 1e-62
Identities = 114/316 (36%), Positives = 176/316 (55%), Gaps = 10/316 (3%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL 437
+ +I RTP+G + SL S+ A L AV I++ + + +D + + +V G QAG
Sbjct: 2 EAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGE 61
Query: 438 -GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+ R A + AGLP S TTVN++C SG+ AI +A++ + G D+++AGG+ESMS
Sbjct: 62 DNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSR 121
Query: 497 VPFYLNRGETKYG-GMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
PF + + ++ + + D + + +Y M AEN A++F ISR++QD
Sbjct: 122 APFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISREDQD 181
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610
+AL S +++A A + F+ +IVPV IPQ+KG+ ++ ++ + E L V
Sbjct: 182 AFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVV 241
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
+ +GTVTAGNAS +NDGAAA +L +EEAV++ P ARI+A A EP I P
Sbjct: 242 -RPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVP 300
Query: 671 AIPTLLKNGG-QLSQF 685
A LL G + QF
Sbjct: 301 ATQKLLARAGLSIDQF 316
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 2e-61
Identities = 115/321 (35%), Positives = 174/321 (54%), Gaps = 20/321 (6%)
Query: 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
+G QAG + R A++ AGLP + TVN++CASG+ A++ A++ ++ G D+ +
Sbjct: 53 LGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYL 112
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAEN 109
AGG+ESMS PF + + E+ + D V+D + Y M +N
Sbjct: 113 AGGVESMSRAPFVMGKAESAFSR----DAKVFDTTIGARFPNPKIVAQYGNDSMPETGDN 168
Query: 110 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK- 168
A +F ISR++ D +A S K A + F+ +I P+ +PQ + +V EDE +
Sbjct: 169 VAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRP 228
Query: 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
E L +F E G VTAGNAS +NDGAAA ++ + A K+ KP+ARI++
Sbjct: 229 SSTVEALTKLKPLF--EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAA 286
Query: 229 AATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVN 286
A EP I P AI L G+ D+ + EINEAF+ VL +K L + D +VN
Sbjct: 287 AGVEPRIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVN 346
Query: 287 VHGGAVSLGHPIGMSGARIVI 307
+GGA+++GHP+G SGAR+ +
Sbjct: 347 PNGGAIAVGHPLGASGARLAL 367
|
Length = 401 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 8e-61
Identities = 109/308 (35%), Positives = 169/308 (54%), Gaps = 19/308 (6%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R AGLP + T+N+ C+SG+++I ++ + LGH + ++AGG ESMS VP
Sbjct: 69 RNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMM-- 126
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
G L++ + Y + MG+ AE A K+ ISR++QD +A+ S++++A
Sbjct: 127 -GHVVRPNPRLVEAA-----PEYY--MGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAK 178
Query: 135 AYKNNVFSSQIVPVSIPQRKGKAD-------IIVNEDEEYK-KINFEKFKSLATVFQKEN 186
A F+ +IVPV + R + I ++DE + E L F
Sbjct: 179 ALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV-K 237
Query: 187 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPT 246
G+VTAGN+S ++DGAAA +LM E KPLA+ ++ A P I P AIP
Sbjct: 238 GSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPK 297
Query: 247 LLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIV 306
LK G+ D+ L+E+NEAF+ + I++L +D KVNV+GGA++LGHP+G +GA++
Sbjct: 298 ALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLT 357
Query: 307 IHLCHALK 314
+ L H +K
Sbjct: 358 LSLIHEMK 365
|
Length = 391 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 2e-58
Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 24/318 (7%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
D I RTP+G F + + A +L A I + +++ +D + + +V G G
Sbjct: 3 DAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQ-GYPN-G 60
Query: 439 QAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+AP R A + AGLP + +++ C SG++A++ A+ + G DV++AGG ESMSN
Sbjct: 61 EAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSN 120
Query: 497 VPFYLN--RGETKYGGMNLIDGIVYDGLSDV--------YNKIH-MGNCAENTAKKFNIS 545
V FY R + GG+ L +D L+ + M AEN +++ IS
Sbjct: 121 VEFYTTDMRWGVRGGGVQL-----HDRLARGRETAGGRRFPVPGGMIETAENLRREYGIS 175
Query: 546 RDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFK 604
R+EQD A+ S++++ A + F +IVPV++PQRKG +V+ DE + E
Sbjct: 176 REEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKG-DPTVVDRDEHPRADTTLESLA 234
Query: 605 SLATVFQK--ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 662
L + K TVTAGNAS ND AAAC++ TE+ + +PLAR++++ A EP
Sbjct: 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS 294
Query: 663 DFPIAPAFAIPTLLKNGG 680
I P A L G
Sbjct: 295 RMGIGPVPATEKALARAG 312
|
Length = 404 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 4e-58
Identities = 115/343 (33%), Positives = 169/343 (49%), Gaps = 49/343 (14%)
Query: 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY 72
R + G + TV + CASGM+A+ A+ ++LG D+++AGG+E+MS+ P
Sbjct: 66 IARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLL 125
Query: 73 LNRGETKY-GGMNLIDGIV--------------------YDGLSDVYNKIHMGNCAENTA 111
+ ++ G I GL+D ++MG AE A
Sbjct: 126 FSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTAEVLA 185
Query: 112 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGK---ADIIVNEDEEYK 168
+F I+R++ D YA S+++ A A ++VP + R GK D V D
Sbjct: 186 HRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFYDHDDGVRPDS--- 239
Query: 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
+ EK L F + G VTAGN+S + DGA +L +EEAV+K+ PL RI+
Sbjct: 240 --SMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQW 297
Query: 229 AATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLD--------- 279
AA +P + P A LL+ G+ +D+ LWEINEAF+ VLA +
Sbjct: 298 AALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQL 357
Query: 280 --------IDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
+D ++NV GGA++LGHP+G SGARIV+HL HALK
Sbjct: 358 GLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALK 400
|
Length = 426 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 203 bits (517), Expect = 2e-57
Identities = 112/320 (35%), Positives = 173/320 (54%), Gaps = 18/320 (5%)
Query: 2 GNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G V G +A CR A +AG P++ TVN+ C+SG++A+ + + G D+ +
Sbjct: 99 GTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIG 158
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
G+ESM+ P GG+N + + MG +EN A++F ++R+E
Sbjct: 159 AGVESMTTNPMAWE------GGVNPRVESFSQAQDCL---LPMGITSENVAERFGVTREE 209
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSI----PQRKGKADIIVNEDEEYK-KINFEKF 175
QD+ A+ S++K+A A + F +IVPV P+ + I+++ D+ +
Sbjct: 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADL 269
Query: 176 KSLATVFQKENGTVTAGNASTLNDGAAACVLMT-EEAVRKFNAKPLARIIAYFDAATEPI 234
L VF K+NGT TAGN+S ++DGA A +LM A++K L ++ +P
Sbjct: 270 AKLKPVF-KKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQK-GLPILGVFRSFAAVGVDPA 327
Query: 235 DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSL 294
I PA AIP +K G+ D+ L+EINEAF+ + KKL +DP KVNV+GGA++L
Sbjct: 328 VMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIAL 387
Query: 295 GHPIGMSGARIVIHLCHALK 314
GHP+G +GAR V L H +K
Sbjct: 388 GHPLGATGARCVATLLHEMK 407
|
Length = 452 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 198 bits (504), Expect = 3e-56
Identities = 107/322 (33%), Positives = 171/322 (53%), Gaps = 18/322 (5%)
Query: 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
MG V Q G R AV+ + LP+S T++++ C S +A+ A+Q + G D+++
Sbjct: 53 MGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVI 112
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVY--DGLSDVYNKIH----MGNCAENTAKK 113
A G+ESM+ VP G+ Y G+ + Y I G AE AKK
Sbjct: 113 AAGVESMTRVPMGSPSTLPAKNGLG-----HYKSPGMEERYPGIQFSQFTG--AEMMAKK 165
Query: 114 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI-IVNEDEEYKKINF 172
+ +S+D+ DE+AL S++++ A + F ++IVP+ I + G ++ V+E +
Sbjct: 166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFD-ATL 224
Query: 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE 232
E + + E G +TA AS + DGA+ +++ E ++ KPLARI +
Sbjct: 225 EGIAGVKLI--AEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGD 282
Query: 233 PIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAV 292
P+ AP A LK G+ D+ L+E+NEAF+ V LA +K DP ++NV+GGA+
Sbjct: 283 PVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAI 342
Query: 293 SLGHPIGMSGARIVIHLCHALK 314
+LGHP+G SG +++ L HALK
Sbjct: 343 ALGHPLGASGTKLMTTLVHALK 364
|
Length = 390 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 2e-54
Identities = 105/311 (33%), Positives = 151/311 (48%), Gaps = 32/311 (10%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+GNV G G R + + AGL T+++ C +G++AI A + G +A
Sbjct: 49 LGNV--VGPGGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIA 106
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GG+ES S PF NR + MG AE A+++NI+R+
Sbjct: 107 GGVESTSTSPFQ-NRARFS---------------PETIGDPDMGVAAEYVAERYNITREM 150
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI-NFEKFKSLA 179
QDEYA SYK++ A + +I+ + DE KK N+E+
Sbjct: 151 QDEYACLSYKRTLQALEKGYIHEEILSFN-----------GLLDESIKKEMNYERIIKRT 199
Query: 180 T-VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F NGTVTAGN+ +NDGA A ++M E RK KP+ R + +P
Sbjct: 200 KPAFLH-NGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGT 258
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P FA+ LL + +D+ +EINEAF+ V+A K+L I K+NV+GGA++LGHP
Sbjct: 259 GPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPY 318
Query: 299 GMSGARIVIHL 309
G SGA +V L
Sbjct: 319 GASGAMLVTRL 329
|
Length = 361 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 3e-53
Identities = 107/327 (32%), Positives = 170/327 (51%), Gaps = 38/327 (11%)
Query: 1 MGNVCQAGLGQAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVM 58
G V G QA R + + AGLP+ TV++ C S +AI A+Q + G QD++
Sbjct: 53 FGCVDTIG-PQAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLV 111
Query: 59 VAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYN------------KIHMGNC 106
VAGG+++MS +P + G G + + ++
Sbjct: 112 VAGGVQNMSQIPI----------SSAMTAGEQL-GFTSPFAESKGWLHRYGDQEVSQFRG 160
Query: 107 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE 166
AE A+K+ ISR+E + +AL S++++ A + F ++IVPV + V DE
Sbjct: 161 AELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPV--------GGVTV--DEG 210
Query: 167 YKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY 226
++ + EK L + E G +TA AS ++DGA+A +L +E AV++ P ARI
Sbjct: 211 PRETSLEKMAGLKPLV--EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHL 268
Query: 227 FDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVN 286
+P+ AP A L+ G++ D+ + EINEAF+ VVLA +K+ DP+KVN
Sbjct: 269 SVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVN 328
Query: 287 VHGGAVSLGHPIGMSGARIVIHLCHAL 313
+GGA++LGHP+G +GA+++ L H L
Sbjct: 329 PNGGAIALGHPLGATGAKLMTTLLHEL 355
|
Length = 382 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 5e-52
Identities = 105/298 (35%), Positives = 158/298 (53%), Gaps = 22/298 (7%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R A + AG+P S TVN++C S M+A+ A++ + G DV + GG+E M +VP
Sbjct: 70 RNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVP---- 125
Query: 75 RGETKYGGMNLIDGIVYD-GLSDVYNKIH--MGNCAENTAKKFNISRDEQDEYALSSYKK 131
MN G+ + GLS K MG AE K ISR++QD +A S+++
Sbjct: 126 --------MN--HGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHQR 175
Query: 132 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTVT 190
+ A + F ++I+P G + + DE + + E +L F NGTVT
Sbjct: 176 AWAATQEGRFKNEIIPTEGHDADG-VLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234
Query: 191 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKN 250
AG +S L+DGA+A ++M+E ++ KP ARI + A +P P A LK
Sbjct: 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKR 294
Query: 251 GGVAKQDVALWEINEAFSVVVLANIKKL---DIDPSKVNVHGGAVSLGHPIGMSGARI 305
G++ D+ ++E+NEAF+ L +K L D KVN++GGA++LGHP+G SGARI
Sbjct: 295 AGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARI 352
|
Length = 387 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 184 bits (468), Expect = 5e-51
Identities = 109/303 (35%), Positives = 159/303 (52%), Gaps = 25/303 (8%)
Query: 30 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS--------------NVPFYLNR 75
TTVN+ C+S ++ +A + G DV ++ G+E++S N F +
Sbjct: 84 TTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQ 143
Query: 76 GET----KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKK 131
T + G D L DVY I MG AEN A+ ISR+EQDE+ + S +
Sbjct: 144 ARTAARAEGGAEAWHDPREDGLLPDVY--IAMGQTAENVAQLTGISREEQDEWGVRSQNR 201
Query: 132 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTA 191
+ +A N F +I PV++P ++ +D +EK L VF + +GTVTA
Sbjct: 202 AEEAIANGFFEREITPVTLPD----GTVVSTDDGPRAGTTYEKVSQLKPVF-RPDGTVTA 256
Query: 192 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNG 251
GNA LNDGAAA V+M++ R+ PLARI++ + P + P A L
Sbjct: 257 GNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALARA 316
Query: 252 GVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCH 311
G++ D+ L EINEAF+ VL + ++L ID K+NV GGA++LGHP GM+GARI L +
Sbjct: 317 GMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLN 376
Query: 312 ALK 314
L+
Sbjct: 377 NLQ 379
|
Length = 406 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 180 bits (460), Expect = 6e-50
Identities = 104/329 (31%), Positives = 162/329 (49%), Gaps = 38/329 (11%)
Query: 1 MGNVCQAGLGQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVM 58
+G V G Q R AV+ AGLP++ +N+ CASG++A+ LA+ + G D++
Sbjct: 55 LGCVTPVG-DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLV 113
Query: 59 VAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
+AGG+ESMS VP + G + + + G A+ A K+ SR
Sbjct: 114 IAGGVESMSRVPMGSDGG-----AWAMDPSTNFP-----TYFVPQGISADLIATKYGFSR 163
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
++ D YA+ S +++A A+ F+ +VPV + I++ DE + E
Sbjct: 164 EDVDAYAVESQQRAAAAWAEGYFAKSVVPV----KDQNGLTILDHDEHMRPGTTMESLAK 219
Query: 178 LATVFQ--------------------KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA 217
L F + N AGN+S + DGAAA ++ +EEA +
Sbjct: 220 LKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGL 279
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
KP ARI+A ++P P A L G+ D+ L+E+NEAF+ VVL ++
Sbjct: 280 KPRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQA 339
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIV 306
LDI KVNV+GGA+++GHP+G +GA I+
Sbjct: 340 LDIPHDKVNVNGGAIAMGHPLGATGAMIL 368
|
Length = 402 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 3e-49
Identities = 105/315 (33%), Positives = 163/315 (51%), Gaps = 26/315 (8%)
Query: 379 DVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG- 436
+ IVS +RTP+ S+R + LG ++ A+++A +D ++V++V MG G
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62
Query: 437 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
G RQ + AGLP + TVN+ C+SG++ I LA+Q + G DV VAGG+ES+S
Sbjct: 63 TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISC 122
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
V +NR L +G + + ++Y M AEN AK++ IS++ QDEY + S
Sbjct: 123 VQNEMNR-------HMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDEYGVQS 173
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKAD----------IIVNEDEEYKK-INFEKFKS 605
+++A A F +IVP+++ G AD + V+ DE + E
Sbjct: 174 QQRAAAAQAAGRFDDEIVPITV--TAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSK 231
Query: 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 665
+ + G +TAGNAS +DGA+ACV+M + + +PL + A EP +
Sbjct: 232 IRSAL--PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMG 289
Query: 666 IAPAFAIPTLLKNGG 680
I P FA+P LLK G
Sbjct: 290 IGPVFAVPKLLKQAG 304
|
Length = 392 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 176 bits (449), Expect = 1e-48
Identities = 104/314 (33%), Positives = 159/314 (50%), Gaps = 18/314 (5%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL- 437
D +I G R+P G +L S+ L A I ++K+ D+++V +G QAG
Sbjct: 3 DAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGED 62
Query: 438 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
+ R A++ AGLP + TVN++CASG+ A++ A++ ++ G D+ +AGG+ESMS
Sbjct: 63 SRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRA 122
Query: 498 PFYLNRGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAENTAKKFNISRD 547
PF + + E+ + D V+D + Y M +N A +F ISR+
Sbjct: 123 PFVMGKAESAFSR----DAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVAAEFGISRE 178
Query: 548 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 606
+ D +A S K A + F+ +I P+ +PQ + +V EDE + E L
Sbjct: 179 DADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKL 238
Query: 607 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 666
+F E G VTAGNAS +NDGAAA ++ + A K+ KP+ARI++ A EP I
Sbjct: 239 KPLF--EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGI 296
Query: 667 APAFAIPTLLKNGG 680
P AI L G
Sbjct: 297 GPVEAIKKALARAG 310
|
Length = 401 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 4e-48
Identities = 108/327 (33%), Positives = 156/327 (47%), Gaps = 35/327 (10%)
Query: 2 GNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G V QAG R A + AGLP TT++ C S +A L + ++ G DV +A
Sbjct: 54 GCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIA 113
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK---IHMGN---CAENTAKKF 114
G+E+MS VP N G I M N AE AK+
Sbjct: 114 CGVEAMSRVPLGAN---------------AGPGRGLPRPDSWDIDMPNQFEAAERIAKRR 158
Query: 115 NISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA-----DIIVNEDEEYKK 169
I+R++ D + L S +++A A+ F +I PV P + +V D+ +
Sbjct: 159 GITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRD 218
Query: 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA 229
E L V E G TAG +S ++DGAAA + M E+ R +P ARI+A
Sbjct: 219 TTMEGLAGLKPVL--EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALV 276
Query: 230 ATEP---IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVN 286
EP +D P+ A +L+ G+ D+ L EINEAF+ VVL+ + + D KVN
Sbjct: 277 GAEPYYHLDGPVQ---ATAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVN 333
Query: 287 VHGGAVSLGHPIGMSGARIVIHLCHAL 313
V+GGA++LGHP+G +GAR++ H L
Sbjct: 334 VNGGAIALGHPVGSTGARLITTALHEL 360
|
Length = 387 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 2e-47
Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 45/344 (13%)
Query: 11 QAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
+AP R+ V+ G+ T +V++ CA+ +A+ ++++ G D+ +AGG +S S
Sbjct: 64 EAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSV 123
Query: 69 VPFY-----------LNRGETKYGGMNLIDGI-------VYDGLSDVYNKIHMGNCAENT 110
+P LN+ T + L + V +++ + MG+ AE
Sbjct: 124 LPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQM 183
Query: 111 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA--DIIVNEDEEYK 168
AK + ISR+EQD A S++ +A A+ +++ +P K D + D
Sbjct: 184 AKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDST-- 241
Query: 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
E + L F +++GTVTA N++ L DGAAA +LM+E + PL + +Y
Sbjct: 242 ---LEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAF 298
Query: 229 AATEPI-DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL--------- 278
AA + D + PA+A P L+ G+ D+ L +++EAF+ LAN++
Sbjct: 299 AAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREK 358
Query: 279 --------DIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
++D SK NV GG+++ GHP +GAR++ H L+
Sbjct: 359 LGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELR 402
|
Length = 428 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 5e-46
Identities = 105/318 (33%), Positives = 167/318 (52%), Gaps = 29/318 (9%)
Query: 379 DVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVC--- 433
D +IV+ +RTP+G + R + L A + SA+ + +D +++ +G C
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVG--CAMP 64
Query: 434 --QAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGM 491
+ GL A R + AGLP S TVN+ CASG++A+ +A+ + +G DVM+A G+
Sbjct: 65 EAEQGLNVA--RIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGV 122
Query: 492 ESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDE 551
ESMS VP G + ++ +V MG AE A+++ +SR++QD
Sbjct: 123 ESMSMVPMM--------GNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDA 174
Query: 552 YALSSYKKSADAYKNNVFSSQIVPVSIPQRK-----GKADI---IVNEDEEYKK-INFEK 602
+AL S++K+ A + F +I P I +R G+ D+ V+ DE + + E
Sbjct: 175 FALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEG 234
Query: 603 FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 662
L VF + G+VTAGN+S +DGA A +L++E+A+++FN PLAR +++ A P
Sbjct: 235 LAKLKPVFANK-GSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE 293
Query: 663 DFPIAPAFAIPTLLKNGG 680
I P AIP LK G
Sbjct: 294 IMGIGPIEAIPAALKQAG 311
|
Length = 399 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 2e-44
Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 32/312 (10%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF--- 71
R A + A +P ++ TVN++C S M+A+ A++ + G DV + GG+E M +VP
Sbjct: 68 RNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHG 127
Query: 72 -----YLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 126
++ K GM MG AE K ISR++QD +A
Sbjct: 128 VDFHPGMSLHVAKAAGM-------------------MGLTAEMLGKMHGISREQQDAFAA 168
Query: 127 SSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE 185
S+ ++ A + F ++I+P G + DE + + E +L F +
Sbjct: 169 RSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAALRPAFDPK 227
Query: 186 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIP 245
NGTVTAG +S L+DGA+A ++M+E+ + KP ARI + A +P P A
Sbjct: 228 NGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQ 287
Query: 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKL---DIDPSKVNVHGGAVSLGHPIGMSG 302
LK G++ D+ ++E+NEAF+ L +K L D KVN++GGA++LGHP+G SG
Sbjct: 288 KALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSG 347
Query: 303 ARIVIHLCHALK 314
ARI L + ++
Sbjct: 348 ARISTTLLNLME 359
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 5e-44
Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 382 IVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVC---QAGL 437
IV+G+RTP+G + + SL ++ LGA+ ++ +++A + + ++ +G C +A
Sbjct: 6 IVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIG--CAMPEAEQ 63
Query: 438 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
G R AGLP + T+N+ C+SG+++I ++ + LGH + ++AGG ESMS V
Sbjct: 64 GLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLV 123
Query: 498 PFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSY 557
P G L++ + Y + MG+ AE A K+ ISR++QD +A+ S+
Sbjct: 124 PMM---GHVVRPNPRLVEAA-----PEYY--MGMGHTAEQVAVKYGISREDQDAFAVRSH 173
Query: 558 KKSADAYKNNVFSSQIVPVSIPQRKGKAD-------IIVNEDEEYK-KINFEKFKSLATV 609
+++A A F+ +IVPV + R + I ++DE + E L
Sbjct: 174 QRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPA 233
Query: 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 669
F G+VTAGN+S ++DGAAA +LM E KPLA+ ++ A P I P
Sbjct: 234 FNV-KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPI 292
Query: 670 FAIPTLLKNGG 680
AIP LK G
Sbjct: 293 AAIPKALKLAG 303
|
Length = 391 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 163 bits (416), Expect = 7e-44
Identities = 116/389 (29%), Positives = 175/389 (44%), Gaps = 87/389 (22%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP---- 70
R+ V+ + L T + + C +G++A +L + ++LG D +AGG+++ S+ P
Sbjct: 72 RECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVN 131
Query: 71 -------FYLNRGETKYGGMNLIDGIV--------------YDGLSDVYNKIHMGNCAEN 109
LNR +T + + + GLS MG A
Sbjct: 132 EGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLS-------MGEHAAI 184
Query: 110 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169
TAK++ ISR+ QDE A +S++ A AY F I P R D + D
Sbjct: 185 TAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTR----DNNLRPD----- 235
Query: 170 INFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
+ EK L VF K T+TAGN++ L DGA+ +L +EE + LA ++ D
Sbjct: 236 SSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLV---D 292
Query: 229 AATEPIDFP-------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK---- 277
A T +DF +APA+A+P LL G+ QD +EI+EAF+ VLA +K
Sbjct: 293 AETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDE 352
Query: 278 --------LD-----IDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHAL--KSGQKGQLS 322
LD ID SK+NV+G +++ GHP +G RIV L L K +G +S
Sbjct: 353 EYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEKGSGRGLIS 412
Query: 323 QFWYDENTTQRLSEEVVCRAGKEGSIALI 351
+C AG +G A++
Sbjct: 413 ----------------ICAAGGQGVTAIL 425
|
Length = 427 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 2e-42
Identities = 55/104 (52%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
KPLARI +Y +P I PA+AIP LK G+ D+ L+EINEAF+ LA K
Sbjct: 2 KPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKD 61
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK--SGQKG 319
L IDP KVNV+GGA++LGHP+G SGARI++ L H LK G+ G
Sbjct: 62 LGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGGKYG 105
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 1e-41
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 19/326 (5%)
Query: 363 LAPDAKASRNFASKPGDVFIVSGSRTPM-GSFRSSLVSLSATKLGAVAIESAIQKANMDK 421
A D+ A + DV IV+ RTP+ + R L A +++ ++K ++
Sbjct: 31 AAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNP 90
Query: 422 SDVQEVYMGNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480
S+V ++ +G V G +A CR A +AG P++ TVN+ C+SG++A+ + +
Sbjct: 91 SEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKA 150
Query: 481 GHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAK 540
G D+ + G+ESM+ P GG+N + + MG +EN A+
Sbjct: 151 GFYDIGIGAGVESMTTNPMAWE------GGVNPRVESFSQAQDCL---LPMGITSENVAE 201
Query: 541 KFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSI----PQRKGKADIIVNEDEEYK 596
+F ++R+EQD+ A+ S++K+A A + F +IVPV P+ + I+++ D+ +
Sbjct: 202 RFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIR 261
Query: 597 -KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMT-EEAVRKFNAKPLARIIAY 654
L VF K+NGT TAGN+S ++DGA A +LM A++K L ++
Sbjct: 262 PNTTLADLAKLKPVF-KKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQK-GLPILGVFRSF 319
Query: 655 FDAATEPIDFPIAPAFAIPTLLKNGG 680
+P I PA AIP +K G
Sbjct: 320 AAVGVDPAVMGIGPAVAIPAAVKAAG 345
|
Length = 452 |
| >gnl|CDD|220643 pfam10237, N6-adenineMlase, Probable N6-adenine methyltransferase | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 4e-40
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 30/161 (18%)
Query: 681 QLSQFWYDENTTQRLSEEAVCRAGKEGSIALISCPTLYPKIRELAPDAK----------- 729
QLSQFWY + T ++L++ + A + IA +S P++Y ++E K
Sbjct: 1 QLSQFWYSDETAEKLAKALLEGADEGTVIACVSAPSVYAALKERPIPTKNVYLLEYDKRF 60
Query: 730 ----------------DVPRELSAHYDLVVLDPPFLSDECLTKAAVTAKL---PLFVSLT 770
++P +L +D V+ DPPFLS+ECLTK A+T KL P L
Sbjct: 61 AVYGGEFVFYDYNKPLELPEQLKGKFDRVIADPPFLSEECLTKTAITIKLLLKPDSKLLL 120
Query: 771 VSGEIMQDLALRLLGVKKCKFIPRHKNNLANDFACFVNFDS 811
+GE M+DLA +LLG+K F+P H+ NL+N+F C+ NF+S
Sbjct: 121 CTGERMEDLAAKLLGLKITDFLPEHERNLSNEFRCYANFES 161
|
This is a protein of approximately 200 residues which is conserved from plants to humans. It contains a highly conserved QFW motif close to the N-terminus and a DPPF motif in the centre. The DPPF motif is characteristic of N-6 adenine-specific DNA methylases, and this family is found in eukaryotes. Length = 161 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 2e-39
Identities = 84/303 (27%), Positives = 148/303 (48%), Gaps = 38/303 (12%)
Query: 379 DVFIVSGSRTPMGSFRSS------LVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNV 432
DV++V +RT FR ++ +L A+ I I+K + ++ ++ G
Sbjct: 3 DVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCA 62
Query: 433 CQAG----LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 488
Q G G R + A LP + V++ CAS + + + + ++ G D+++A
Sbjct: 63 LQVGENWLYGG---RHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIA 119
Query: 489 GGMESMSNVPFYLN---------RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539
GG+E M+ P N + KY +L G V MG AE A
Sbjct: 120 GGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYV------------MGLTAEKLA 167
Query: 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-I 598
++ I R+E D ++L S++ +A A + F +I+P+ + + +GK +V+ D+ +
Sbjct: 168 EEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEV-EVEGK-KKVVDVDQSVRPDT 225
Query: 599 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA 658
+ EK L F K +G +TAGN+S LN GA+ +LM+++AV+K+ KP+A+I ++ A
Sbjct: 226 SLEKLAKLPPAF-KPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAG 284
Query: 659 TEP 661
P
Sbjct: 285 VPP 287
|
Length = 394 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 7e-39
Identities = 94/316 (29%), Positives = 143/316 (45%), Gaps = 33/316 (10%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R A + AG T+++ C G+ ++ LA+ + G +D+++AGG E MS
Sbjct: 71 RMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAA 130
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
+ L ++ + H G C + A I+R+ D L S +++A
Sbjct: 131 EDMAAGKPPLGMGS-GNLRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAAR 189
Query: 135 AYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK--INFEKFKSLATVFQK-------E 185
A K F +VPV + + EE+ + E +L F +
Sbjct: 190 AIKEGRFDKSLVPVYRDDGS-----VALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDD 244
Query: 186 NGTV------------------TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYF 227
GT AGN+S + DGAAA +L ++ K KP ARI+A
Sbjct: 245 KGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMA 304
Query: 228 DAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNV 287
+ +P AP A +L G+ K D+ LWEINEAF+VV I+ LD+D KVNV
Sbjct: 305 NMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNV 364
Query: 288 HGGAVSLGHPIGMSGA 303
+GGA++LGHPIG +G+
Sbjct: 365 NGGAIALGHPIGATGS 380
|
Length = 417 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 1e-38
Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 38/316 (12%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+ +IV RTP+G + L + LGA ++ + + +D + V +V G V G
Sbjct: 3 EAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIG-P 61
Query: 439 QAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
QA R + + AGLP+ TV++ C S +AI A+Q + G QD++VAGG+++MS
Sbjct: 62 QAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQ 121
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDGLSDVYN------------KIHMGNCAENTAKKFNI 544
+P + G G + + ++ AE A+K+ I
Sbjct: 122 IPI----------SSAMTAGEQL-GFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGI 170
Query: 545 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFK 604
SR+E + +AL S++++ A + F ++IVPV + V DE ++ + EK
Sbjct: 171 SREEMERFALESHRRAFAAIRAGRFDNEIVPV--------GGVTV--DEGPRETSLEKMA 220
Query: 605 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF 664
L + E G +TA AS ++DGA+A +L +E AV++ P ARI +P+
Sbjct: 221 GLKPLV--EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFM 278
Query: 665 PIAPAFAIPTLLKNGG 680
AP A L+ G
Sbjct: 279 LTAPIPATRYALEKTG 294
|
Length = 382 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 1e-38
Identities = 93/290 (32%), Positives = 144/290 (49%), Gaps = 34/290 (11%)
Query: 377 PGDVFIVSGSRTPM-----GSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMG 430
DV IV RTPM G+FR+ + A L A + S + + +D +++ ++ G
Sbjct: 1 MEDVVIVDAIRTPMGRSKGGAFRN----VRAEDLSAHLMRSLLARNPALDPAEIDDIIWG 56
Query: 431 NVCQA---GLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 487
V Q G A R A + AG+P S TVN++C S M+A+ A++ + G DV +
Sbjct: 57 CVQQTLEQGFNIA--RNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFL 114
Query: 488 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD-GLSDVYNKIH--MGNCAENTAKKFNI 544
GG+E M +VP MN G+ + GLS K MG AE K I
Sbjct: 115 IGGVEHMGHVP------------MN--HGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGI 160
Query: 545 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKF 603
SR++QD +A S++++ A + F ++I+P G + + DE + + E
Sbjct: 161 SREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADG-VLKLFDYDEVIRPETTVEAL 219
Query: 604 KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
+L F NGTVTAG +S L+DGA+A ++M+E ++ KP ARI +
Sbjct: 220 AALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRS 269
|
Length = 387 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 3e-38
Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 30/330 (9%)
Query: 374 ASKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVC 433
+ + IVSG RTP ++ + A LG + + + ++ +D ++++ G V
Sbjct: 1 TRQGDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVV 60
Query: 434 QAGLGQAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGM 491
Q + +AP R+ V+ G+ T +V++ CA+ +A+ ++++ G D+ +AGG
Sbjct: 61 Q--MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGA 118
Query: 492 ESMSNVPFY-----------LNRGETKYGGMNLIDGI-------VYDGLSDVYNKIHMGN 533
+S S +P LN+ T + L + V +++ + MG+
Sbjct: 119 DSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGD 178
Query: 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA--DIIVNE 591
AE AK + ISR+EQD A S++ +A A+ +++ +P K D +
Sbjct: 179 TAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRG 238
Query: 592 DEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARI 651
D E + L F +++GTVTA N++ L DGAAA +LM+E + PL +
Sbjct: 239 DST-----LEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYL 293
Query: 652 IAYFDAATEPI-DFPIAPAFAIPTLLKNGG 680
+Y AA + D + PA+A P L+ G
Sbjct: 294 RSYAFAAIDVWQDMLLGPAYATPLALERAG 323
|
Length = 428 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 4e-38
Identities = 94/351 (26%), Positives = 166/351 (47%), Gaps = 43/351 (12%)
Query: 2 GNVCQAGLGQAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G V Q + +AP R+ V+ G+ T +V + CA+ ++ + ++++ G D+ +
Sbjct: 59 GQVVQ--MPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGI 116
Query: 60 AGGMESMSNVPF-----------YLNRGETKYGGMNLIDGI-------VYDGLSDVYNKI 101
AGG +S S +P LN+ T + + + V +++ +
Sbjct: 117 AGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGL 176
Query: 102 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161
MG AE AK + I+R EQD A S+ ++ A+++ + +++ P K I
Sbjct: 177 SMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK---QWIA 233
Query: 162 NEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA 221
++ + L F +++G+VTA N++ L DGAAA +LM E ++ +PL
Sbjct: 234 EDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLG 293
Query: 222 RIIAY-FDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL-- 278
I +Y F A D + P++A P L+ G+A D+ L +++EAF+ LAN++
Sbjct: 294 YIRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFAS 353
Query: 279 ---------------DIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
+ID SK NV GG+++ GHP +GAR++ LK
Sbjct: 354 DKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELK 404
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 2e-36
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 18/308 (5%)
Query: 381 FIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG-LGQ 439
+IV+ +RT G L L A +++ + ++ D + +++V MG V Q G
Sbjct: 5 YIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQAT 64
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF 499
R AV+ + LP+S T++++ C S +A+ A+Q + G D+++A G+ESM+ VP
Sbjct: 65 NVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPM 124
Query: 500 YLNRGETKYGGMNLIDGIVY--DGLSDVYNKIH----MGNCAENTAKKFNISRDEQDEYA 553
G+ Y G+ + Y I G AE AKK+ +S+D+ DE+A
Sbjct: 125 GSPSTLPAKNGLG-----HYKSPGMEERYPGIQFSQFTG--AEMMAKKYGLSKDQLDEFA 177
Query: 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI-IVNEDEEYKKINFEKFKSLATVFQK 612
L S++++ A + F ++IVP+ I + G ++ V+E + E + +
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRF-DATLEGIAGVKLI--A 234
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAI 672
E G +TA AS + DGA+ +++ E ++ KPLARI +P+ AP A
Sbjct: 235 EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPAT 294
Query: 673 PTLLKNGG 680
LK G
Sbjct: 295 ERALKKAG 302
|
Length = 390 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 2e-35
Identities = 88/298 (29%), Positives = 130/298 (43%), Gaps = 35/298 (11%)
Query: 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAP 441
IV RTP+G L +L A + M++ ++ +V +GNV G G
Sbjct: 5 IVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFL--SKGMER-EIDDVILGNV--VGPGGNV 59
Query: 442 CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL 501
R + + AGL T+++ C +G++AI A + G +AGG+ES S PF
Sbjct: 60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQ- 118
Query: 502 NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSA 561
NR + MG AE A+++NI+R+ QDEYA SYK++
Sbjct: 119 NRARFS---------------PETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTL 163
Query: 562 DAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI-NFEKFKSLAT-VFQKENGTVTA 619
A + +I+ + DE KK N+E+ F NGTVTA
Sbjct: 164 QALEKGYIHEEILSFN-----------GLLDESIKKEMNYERIIKRTKPAFLH-NGTVTA 211
Query: 620 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
GN+ +NDGA A ++M E RK KP+ R + +P P FA+ LL
Sbjct: 212 GNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLN 269
|
Length = 361 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 3e-35
Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 32/323 (9%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
V+IV G+RTP R SA+ L A + + + D+ EV +G +
Sbjct: 4 PVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDE 63
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
R + G + TV + CASGM+A+ A+ ++LG D+++AGG+E+MS+ P
Sbjct: 64 ANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAP 123
Query: 499 FYLNRGETKY-GGMNLIDGIV--------------------YDGLSDVYNKIHMGNCAEN 537
+ ++ G I GL+D ++MG AE
Sbjct: 124 LLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTAEV 183
Query: 538 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGK---ADIIVNEDEE 594
A +F I+R++ D YA S+++ A A ++VP + R GK D V D
Sbjct: 184 LAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFYDHDDGVRPDS- 239
Query: 595 YKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY 654
+ EK L F + G VTAGN+S + DGA +L +EEAV+K+ PL RI+
Sbjct: 240 ----SMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDS 295
Query: 655 FDAATEPIDFPIAPAFAIPTLLK 677
AA +P + P A LL+
Sbjct: 296 QWAALDPSQMGLGPVHAATPLLQ 318
|
Length = 426 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 7e-35
Identities = 92/304 (30%), Positives = 134/304 (44%), Gaps = 32/304 (10%)
Query: 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG- 436
G+ IV RTP+G L L A +L + + +A +D DV++V G V QAG
Sbjct: 2 GNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGE 61
Query: 437 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
R A + AGLP TT++ C S +A L + ++ G DV +A G+E+MS
Sbjct: 62 QSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSR 121
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK---IHMGN---CAENTAKKFNISRDEQD 550
VP N G I M N AE AK+ I+R++ D
Sbjct: 122 VPLGAN---------------AGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVD 166
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA-----DIIVNEDEEYKKINFEKFKS 605
+ L S +++A A+ F +I PV P + +V D+ + E
Sbjct: 167 AFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAG 226
Query: 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP---I 662
L V E G TAG +S ++DGAAA + M E+ R +P ARI+A EP +
Sbjct: 227 LKPVL--EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHL 284
Query: 663 DFPI 666
D P+
Sbjct: 285 DGPV 288
|
Length = 387 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 132 bits (332), Expect = 3e-33
Identities = 91/350 (26%), Positives = 141/350 (40%), Gaps = 72/350 (20%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ +QA + AG + +N +C SG++A+ LA Q ++ G + ++A
Sbjct: 50 LGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILA 109
Query: 61 GGMESMS----NVP--FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKF 114
GG E M N +++ KYG
Sbjct: 110 GGFEKMETSAENNAKEKHIDVLINKYG--------------------------------- 136
Query: 115 NISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFE 173
R D +AL+ + A K+ F + + RKG +E ++ + + +
Sbjct: 137 --MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLD 194
Query: 174 KFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAK-------PLARIIAY 226
+ L F KE +TAGNA LNDGAAA +LM+E +K + L I
Sbjct: 195 EIAKLRPAFDKE-DFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDM 253
Query: 227 FDAATEPIDFPIA----PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP 282
+ + P A L+ G+ D+ L E ++AF+ A + L + P
Sbjct: 254 ASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCP 313
Query: 283 ------------------SKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
S +N +GGA+++GHPIG SGA I LC LK
Sbjct: 314 EGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELK 363
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 5e-32
Identities = 90/327 (27%), Positives = 145/327 (44%), Gaps = 40/327 (12%)
Query: 379 DVFIVSGSRTPMGSFRS--SLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG 436
+ +I RTP G + SL + +L A +E+ + +D + V +V +G V G
Sbjct: 3 EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62
Query: 437 LGQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
Q R AV+ AGLP++ +N+ CASG++A+ LA+ + G D+++AGG+ESM
Sbjct: 63 -DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESM 121
Query: 495 SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 554
S VP + G + + + G A+ A K+ SR++ D YA+
Sbjct: 122 SRVPMGSDG-----GAWAMDPSTNFP-----TYFVPQGISADLIATKYGFSREDVDAYAV 171
Query: 555 SSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQ-- 611
S +++A A+ F+ +VPV + I++ DE + E L F
Sbjct: 172 ESQQRAAAAWAEGYFAKSVVPV----KDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 612 ------------------KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
+ N AGN+S + DGAAA ++ +EEA + KP ARI+A
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 654 YFDAATEPIDFPIAPAFAIPTLLKNGG 680
++P P A L G
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAG 314
|
Length = 402 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 1e-31
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 37/297 (12%)
Query: 382 IVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVC-----Q 434
IVS +R+P+G +F+ SL + L A + +A+ K +D +D+ ++ +G C +
Sbjct: 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLG--CGLPGGE 63
Query: 435 AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
G A R + G TTVN+ C+S ++ +A + G DV ++ G+E++
Sbjct: 64 QGFNMA--RVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETV 120
Query: 495 S--------------NVPFYLNRGET----KYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536
S N F + T + G D L DVY I MG AE
Sbjct: 121 SRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVY--IAMGQTAE 178
Query: 537 NTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 596
N A+ ISR+EQDE+ + S ++ +A N F +I PV++P ++ +D
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPD----GTVVSTDDGPRA 234
Query: 597 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
+EK L VF + +GTVTAGNA LNDGAAA V+M++ R+ PLARI++
Sbjct: 235 GTTYEKVSQLKPVF-RPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVS 290
|
Length = 406 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 2e-31
Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 32/314 (10%)
Query: 379 DVFIVSGSRTPMGSFRSSLV-SLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQA- 435
DV IV RTPMG + + A L A + + + +D ++V+++Y G V Q
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 436 GLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
G R A + A +P ++ TVN++C S M+A+ A++ + G DV + GG+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 496 NVPF--------YLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 547
+VP ++ K GM MG AE K ISR+
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM-------------------MGLTAEMLGKMHGISRE 161
Query: 548 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 606
+QD +A S+ ++ A + F ++I+P G + DE + + E +L
Sbjct: 162 QQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAAL 220
Query: 607 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 666
F +NGTVTAG +S L+DGA+A ++M+E+ + KP ARI + A +P
Sbjct: 221 RPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGY 280
Query: 667 APAFAIPTLLKNGG 680
P A LK G
Sbjct: 281 GPVPATQKALKRAG 294
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-28
Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 26/322 (8%)
Query: 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
+ IV+G RTP ++ + A LG + + + ++ +D ++++ G V Q + +
Sbjct: 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQ--MPE 66
Query: 440 AP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
AP R+ V+ G+ T +V + CA+ ++ + ++++ G D+ +AGG +S S +
Sbjct: 67 APNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVL 126
Query: 498 PF-----------YLNRGETKYGGMNLIDGI-------VYDGLSDVYNKIHMGNCAENTA 539
P LN+ T + + + V +++ + MG AE A
Sbjct: 127 PIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMA 186
Query: 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 599
K + I+R EQD A S+ ++ A+++ + +++ P K I ++
Sbjct: 187 KTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK---QWIAEDNNIRHNST 243
Query: 600 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY-FDAA 658
+ L F +++G+VTA N++ L DGAAA +LM E ++ +PL I +Y F A
Sbjct: 244 LAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAI 303
Query: 659 TEPIDFPIAPAFAIPTLLKNGG 680
D + P++A P L+ G
Sbjct: 304 DVWQDMLMGPSYATPLALQRAG 325
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (289), Expect = 4e-27
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 53/281 (18%)
Query: 443 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP---- 498
R+ V+ + L T + + C +G++A +L + ++LG D +AGG+++ S+ P
Sbjct: 72 RECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVN 131
Query: 499 -------FYLNRGETKYGGMNLIDGIV--------------YDGLSDVYNKIHMGNCAEN 537
LNR +T + + + GLS MG A
Sbjct: 132 EGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLS-------MGEHAAI 184
Query: 538 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 597
TAK++ ISR+ QDE A +S++ A AY F I P R D + D
Sbjct: 185 TAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTR----DNNLRPD----- 235
Query: 598 INFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 656
+ EK L VF K T+TAGN++ L DGA+ +L +EE + LA ++ D
Sbjct: 236 SSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLV---D 292
Query: 657 AATEPIDFP-------IAPAFAIPTLL-KNGGQLSQFWYDE 689
A T +DF +APA+A+P LL +NG L F + E
Sbjct: 293 AETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYE 333
|
Length = 427 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 2e-26
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 46/280 (16%)
Query: 383 VSGSRTPMGSF---RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
+ T G F + + A + GA AI +A++ A + V+E +G V AG GQ
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS---- 495
+QA + AG + +N +C SG++A+ LA Q ++ G + ++AGG E M
Sbjct: 61 NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE 120
Query: 496 NVP--FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 553
N +++ KYG R D +A
Sbjct: 121 NNAKEKHIDVLINKYG-----------------------------------MRACPDAFA 145
Query: 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612
L+ + A K+ F + + RKG +E ++ + + ++ L F K
Sbjct: 146 LAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDK 205
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARII 652
E +TAGNA LNDGAAA +LM+E +K + AR I
Sbjct: 206 E-DFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREI 244
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 94.5 bits (235), Expect = 2e-20
Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 45/337 (13%)
Query: 379 DVFIVSGSRTPMG---SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQA 435
+ +I+ RTP G + +L L L A +++ ++ ++ +DV ++ Q
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62
Query: 436 G-----LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
G LG R A + AG T+++ C G+ ++ LA+ + G +D+++AGG
Sbjct: 63 GKQGGDLG----RMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGG 118
Query: 491 MESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
E MS + L ++ + H G C + A I+R+ D
Sbjct: 119 TEMMSYTAAMAAEDMAAGKPPLGMGS-GNLRLRALHPQSHQGVCGDAIATMEGITREALD 177
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK--INFEKFKSLAT 608
L S +++A A K F +VPV + + EE+ + E +L
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPVYRDDGS-----VALDHEEFPRPQTTAEGLAALKP 232
Query: 609 VFQK-------ENGTV------------------TAGNASTLNDGAAACVLMTEEAVRKF 643
F + GT AGN+S + DGAAA +L ++ K
Sbjct: 233 AFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKH 292
Query: 644 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGG 680
KP ARI+A + +P AP A +L G
Sbjct: 293 GLKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAG 329
|
Length = 417 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 4e-12
Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 7/140 (5%)
Query: 191 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI----APAFAIPT 246
DGAAA V+ +EE + A P A I++ P A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 247 LLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKV---NVHGGAVSLGHPIGMSGA 303
L+ G+ D+ E + + + A L +DP V V + GHP+G +G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 304 RIVIHLCHALKSGQKGQLSQ 323
I+ L L+ +
Sbjct: 214 AILDELLLMLEHEFIPPTPR 233
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|220643 pfam10237, N6-adenineMlase, Probable N6-adenine methyltransferase | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 3e-10
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 320 QLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPTLYPKIREL 363
QLSQFWY + T ++L++ ++ A + IA +S P++Y ++E
Sbjct: 1 QLSQFWYSDETAEKLAKALLEGADEGTVIACVSAPSVYAALKER 44
|
This is a protein of approximately 200 residues which is conserved from plants to humans. It contains a highly conserved QFW motif close to the N-terminus and a DPPF motif in the centre. The DPPF motif is characteristic of N-6 adenine-specific DNA methylases, and this family is found in eukaryotes. Length = 161 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN 461
A++LG A E AI A + K + V +G +G Q G+ +VN
Sbjct: 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP-AYSVN 65
Query: 462 KVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
+ CA+G+ A+ LA Q + G D+++AGG E
Sbjct: 66 QACATGLTALALAVQQVQNGKADIVLAGGSEE 97
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 5e-08
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 379 DVFIVSGSRTPMG-----SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVC 433
DV I+ +T G S R V A A++ A +D D+ +Y+GN+
Sbjct: 3 DVAIIGVGQTKFGELWDVSLRDLAVE---------AGLEALEDAGIDGKDIDAMYVGNMS 53
Query: 434 QAGLGQAPCRQAVI--FAGL-PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
A+I +AGL P T V CASG A+ A ++ G DV++A G
Sbjct: 54 AGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLAVASGEADVVLAAG 111
Query: 491 MESMSNVP 498
+E M++VP
Sbjct: 112 VEKMTDVP 119
|
Length = 389 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 6e-08
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 198 NDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA-----TEPIDFPIAPAF--AIPTLLKN 250
+DGAAA VL +EE R+ +P I+ A+ +E DF A A K
Sbjct: 205 SDGAAAVVLASEERARELTDRP-VWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKM 263
Query: 251 GGVAKQDVALWEINEAFSVVVLANIKKL---------------DIDPS---KVNVHGGAV 292
G+ D+ + E+ + F++ L ++ L D VN GG +
Sbjct: 264 AGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLL 323
Query: 293 SLGHPIGMSGARIVIHLCHALK 314
S GHP+G +G + L+
Sbjct: 324 SKGHPLGATGLAQAVEAVRQLR 345
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGG 680
KPLARI +Y +P I PA+AIP LK G
Sbjct: 2 KPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAG 36
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 2e-05
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 405 LGAVAIESAIQKANMDKSDVQEVYMGNVC----QAGLGQAPCRQAVIFAGLPKSTVCTTV 460
L A A +A+ A ++ +D+ V +GN Q+ G L K
Sbjct: 19 LAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYL---GLLGKPATRVEA 75
Query: 461 NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
ASG A+ A+ ++ G DV++ G E MS+VP
Sbjct: 76 A--GASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVP 111
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 9e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 12 APCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
Q I GL P TV T CASG AI A++ + LG DV++AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 9e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 440 APCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
Q I GL P TV T CASG AI A++ + LG DV++AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAG 61
G +G Q G+ +VN+ CA+G+ A+ LA Q + G D+++AG
Sbjct: 35 GTTGGSGEFSGAAGQLAYHLGISGGP-AYSVNQACATGLTALALAVQQVQNGKADIVLAG 93
Query: 62 GMES 65
G E
Sbjct: 94 GSEE 97
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 405 LGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFA----GLPKSTVCTTV 460
+ A A +A+ A +D VQ+ Y+G V G + Q ++ G+P V
Sbjct: 25 MAAEAGRAALADAGIDYDAVQQAYVGYV----YGDSTSGQRALYEVGMTGIP----IVNV 76
Query: 461 NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
N C++G A+ LA Q + G D +A G E M
Sbjct: 77 NNNCSTGSTALFLARQAVRSGAADCALALGFEQM 110
|
Length = 391 |
| >gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 409 AIESAIQKANMDKSDVQEVYMG---NVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCA 465
A A+ A ++ D+ + G + +G P +A+ +P T V CA
Sbjct: 34 AFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP----VTRVENFCA 89
Query: 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMN 512
+G +A A ++ G D+ +A G+E + +T YGG+
Sbjct: 90 TGSEAFRGAVYAVASGAYDIALALGVEKLK---------DTGYGGLP 127
|
Length = 398 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 0.002
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 28 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65
++ CA+G AI A++ ++ G DVMVAGG E+
Sbjct: 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEA 191
|
Length = 411 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 0.002
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
++ CA+G AI A++ ++ G DVMVAGG E+
Sbjct: 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEA 191
|
Length = 411 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 36 CASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
C+S + A+ A +++ G D+ +AGG+E+
Sbjct: 164 CSSSLVALHAAVRSIRRGECDLALAGGVEAPLT 196
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 464 CASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
C+S + A+ A +++ G D+ +AGG+E+
Sbjct: 164 CSSSLVALHAAVRSIRRGECDLALAGGVEAPLT 196
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 29/154 (18%)
Query: 195 STLNDGAAACVLMTEEAVRKFNAKP----LARIIAYFDAATEPIDFP------IAPAFAI 244
S ++DG A VL +EE ++K P L I + A+ + P A
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAA 315
Query: 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI-DPSK-----------------VN 286
L GV D+ + E+++ F++ L + L I + VN
Sbjct: 316 QKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVN 375
Query: 287 VHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQ 320
GG +S GHP+G +G + ++ + +K GQ G+
Sbjct: 376 TGGGLLSFGHPVGATGVKQIMEVYRQMK-GQCGE 408
|
Length = 438 |
| >gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 23/129 (17%)
Query: 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEV------- 427
S P V+I+ P G + V + G VA +A+ A +D DVQ V
Sbjct: 1 SMPEPVYILGAGMHPWGKWGRDFV-----EYGVVAARAALADAGLDWRDVQLVVGADTIR 55
Query: 428 --YMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDV 485
Y G V A QA + + G P ++ CASG +A+ A + G DV
Sbjct: 56 NGYPGFVAGATFAQA-----LGWNGAP----VSSSYAACASGSQALQSARAQILAGLCDV 106
Query: 486 MVAGGMESM 494
+ G ++
Sbjct: 107 ALVVGADTT 115
|
Length = 399 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| KOG1390|consensus | 396 | 100.0 | ||
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| KOG1391|consensus | 396 | 100.0 | ||
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1389|consensus | 435 | 100.0 | ||
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1390|consensus | 396 | 100.0 | ||
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| KOG1389|consensus | 435 | 100.0 | ||
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1391|consensus | 396 | 100.0 | ||
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| KOG1392|consensus | 465 | 100.0 | ||
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG3350|consensus | 217 | 100.0 | ||
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PF10237 | 162 | N6-adenineMlase: Probable N6-adenine methyltransfe | 100.0 | |
| KOG1406|consensus | 408 | 100.0 | ||
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1392|consensus | 465 | 100.0 | ||
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.97 | |
| KOG1406|consensus | 408 | 99.96 | ||
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.96 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.9 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.89 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.88 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.88 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.87 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.85 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.85 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.84 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.83 | |
| KOG1394|consensus | 440 | 99.83 | ||
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.82 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.81 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.8 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.8 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.8 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.8 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.79 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.79 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.77 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.75 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.74 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.74 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.72 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.72 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.69 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.66 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.64 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.63 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.62 | |
| KOG1394|consensus | 440 | 99.62 | ||
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.61 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.6 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.6 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.58 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.58 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.57 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.56 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.55 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.55 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.52 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.5 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.49 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.48 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.47 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.45 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.45 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.43 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.43 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.4 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.38 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.38 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.37 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.35 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.33 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.22 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.15 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.14 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.14 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.14 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.14 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.13 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.11 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.09 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.08 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.07 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.06 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.06 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.06 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.06 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.03 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.02 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.0 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 98.99 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 98.97 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 98.97 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 98.96 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.95 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.91 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.9 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 98.88 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 98.87 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.86 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.86 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 98.83 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 98.83 | |
| PRK06840 | 339 | hypothetical protein; Validated | 98.81 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 98.78 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 98.78 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.78 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 98.76 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 98.69 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.67 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.65 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 98.65 | |
| PRK06840 | 339 | hypothetical protein; Validated | 98.58 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 98.57 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 98.55 | |
| KOG1202|consensus | 2376 | 98.55 | ||
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 98.54 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 98.54 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 98.52 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 98.52 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 98.49 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 98.49 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 98.47 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.43 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 98.42 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 98.4 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 98.36 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 98.35 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 98.33 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 98.33 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 98.33 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.33 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 98.32 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 98.32 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 98.29 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 98.27 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 98.26 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 98.24 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 98.16 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 98.15 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.14 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 98.13 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 98.1 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.01 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 97.97 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 97.87 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 97.84 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 97.68 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 97.62 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.57 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 97.44 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 97.42 | |
| KOG1202|consensus | 2376 | 97.4 | ||
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 97.36 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 97.35 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 97.16 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 97.01 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 96.41 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 96.29 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 96.25 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 95.84 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 95.15 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 94.48 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 93.74 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 86.52 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 83.27 |
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-70 Score=549.65 Aligned_cols=336 Identities=60% Similarity=0.957 Sum_probs=326.8
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCC-ccccCccc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF-YLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~-~~~~~~~~ 79 (814)
+|||++++.|++|+||+++.+|||.++|++|||..|+||+.|+.+|++.|+.|..|+|++||+|+||+.|+ ...|.+.+
T Consensus 57 ~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~ 136 (396)
T KOG1390|consen 57 FGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVK 136 (396)
T ss_pred hccccccccCcchHHHHHhhcCCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999994 44588899
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
+|.....+.+..|+++|.+...+||..||+.+++|+||||+||+||+.|++|+..+|++|.|++||+|++++.++| .+.
T Consensus 137 ~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg-~~~ 215 (396)
T KOG1390|consen 137 YGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRG-ETV 215 (396)
T ss_pred cCCeeeeechhhcchHHHhccCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCC-cEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999888 678
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
++.||++++.++.+++.+++++|.++++++|..|.+.++|||+|+||+|++.+.++|++|+|+|++|+.+..+|.+|..+
T Consensus 216 v~~DEe~~k~~~~~~~~~l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~ia 295 (396)
T KOG1390|consen 216 VKKDEEPKKGSNIEKLSKLRPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIA 295 (396)
T ss_pred eccchhhhcccchhhhccccceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccc
Confidence 89999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
|..+++++|+++||..+|||+||+||+|+.+.|..++.||++|+++|++||+.++|||+|+||+|.+.++++-|+. |+
T Consensus 296 P~laipk~lk~aG~~~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g~ 375 (396)
T KOG1390|consen 296 PALAIPKALKKAGLEQSDVDYWEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGGK 375 (396)
T ss_pred hHHHHHHHHHHcCcchhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |.|||.+++|+||+
T Consensus 376 ~GvAai----------------CnGGGgasa~viek 395 (396)
T KOG1390|consen 376 IGVAAI----------------CNGGGGASAMVIEK 395 (396)
T ss_pred eeEEEE----------------ecCCCceeeEEEec
Confidence 999998 99999999999985
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-63 Score=549.54 Aligned_cols=332 Identities=31% Similarity=0.471 Sum_probs=296.7
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
|||++|.+. ++|++|++++.+|||..+|++|||+.|+||++||.+|+++|++|++|++|+||+|+||+.|+.... ..+
T Consensus 56 ~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~-~~~ 134 (417)
T PRK06025 56 WSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAE-DMA 134 (417)
T ss_pred EEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccc-ccc
Confidence 699999887 799999999999999999999999999999999999999999999999999999999999973221 111
Q ss_pred CC-CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCce
Q psy12877 80 YG-GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKAD 158 (814)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~ 158 (814)
.+ .....+.. .+++.+.+....|+++||+++++||||||+||+||++||+||.+++++|+|.+||+|+. .++|. .
T Consensus 135 ~~~~~~~~~~~-~~~~~~~~~~~~Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~--~~~~~-~ 210 (417)
T PRK06025 135 AGKPPLGMGSG-NLRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY--RDDGS-V 210 (417)
T ss_pred CCCCccccccc-CcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEE--cCCCC-E
Confidence 11 11111111 23344444456899999999999999999999999999999999999999999999998 23333 5
Q ss_pred eeccCCccccCCCHHhhhcCCceecc-------CCCc------------------cccCCCCCcCceeeEEEEcCHHHHH
Q psy12877 159 IIVNEDEEYKKINFEKFKSLATVFQK-------ENGT------------------VTAGNASTLNDGAAACVLMTEEAVR 213 (814)
Q Consensus 159 ~~~~d~~~r~~~t~e~~~~~~~~~~~-------~~~p------------------l~~~~~~~~~DGAaAvvl~s~~~A~ 213 (814)
+++.||.+|+++|+|.|.++||+|++ ++|. +|++|||+++|||+|+||+|+++|+
T Consensus 211 ~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~ 290 (417)
T PRK06025 211 ALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAE 290 (417)
T ss_pred EecCCCCCCCCCCHHHHcCCCCCccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHH
Confidence 68999999999999999999999963 3476 9999999999999999999999999
Q ss_pred HcCCCccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCcc
Q psy12877 214 KFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVS 293 (814)
Q Consensus 214 ~~g~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la 293 (814)
+++.+|.++|.|++...++|..++.+|..+++++|+++|++++|||+||+||+|+.+++.+++.||++.+|+|++||+++
T Consensus 291 ~lg~~p~a~I~g~~~a~~~p~~~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia 370 (417)
T PRK06025 291 KHGLKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIA 370 (417)
T ss_pred HcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHh
Confidence 99999999999999999899888889999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 294 LGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 294 ~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|||+|+||++++.++++||++ +++|++++ |+|||+|.+++||.
T Consensus 371 ~GHp~GaTGa~~v~~ll~qL~~~g~~~Gl~~~----------------c~~GG~g~A~lle~ 416 (417)
T PRK06025 371 LGHPIGATGSILIGTVLDELERRGLKRGLVTM----------------CAAGGMAPAIIIER 416 (417)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhCCCeEEEEE----------------EeeccceeEEEEEe
Confidence 9999999999999999999997 57788887 99999999999984
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=548.21 Aligned_cols=335 Identities=36% Similarity=0.575 Sum_probs=297.3
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+. |+|++|++++.+||+.++|+++|+++|+||++|+.+|+++|++|++|++||+|+|+||+.|+........
T Consensus 54 ~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~ 133 (400)
T PRK13359 54 YGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESA 133 (400)
T ss_pred EEeccccccccccHHHHHHHHcCCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccc
Confidence 588888775 6899999999999998899999999999999999999999999999999999999999999632211111
Q ss_pred CC-CCcccccc-----cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC
Q psy12877 80 YG-GMNLIDGI-----VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR 153 (814)
Q Consensus 80 ~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~ 153 (814)
++ .....+.. ..+.+.+.+....|+++||+++++||||||+||+|+++||+|+..++.+|+|++||+|+.++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~ 213 (400)
T PRK13359 134 FSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQK 213 (400)
T ss_pred ccCCcccccccccccccCCccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccC
Confidence 11 11111111 1123344445668999999999999999999999999999999999999999999999998776
Q ss_pred CCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 154 KGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 154 ~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
+|+..++..||.+|+ +|+|++.+++|+|++ +|++|++|||+++|||+|+||+|+++|++++.+|+++|+|++....+|
T Consensus 214 ~~~~~~~~~De~~r~-~t~e~l~~l~p~f~~-~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p 291 (400)
T PRK13359 214 KGDPLVVSRDEHPRE-TTLEALAKLKGVVRP-DGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEP 291 (400)
T ss_pred CCCceeecCCCCCCC-CCHHHHhcCCCccCC-CCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCC
Confidence 665567899999997 999999999999954 478999999999999999999999999999999989999999987788
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC--CCcccCCCCccccCCCCChHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP--SKVNVHGGAVSLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gasG~~~l~e~v~ 311 (814)
..++.++..|++++|+++||+++|||+||+||+|++++++++|+||||+ .|+|++||++++|||+|+||+++++|+++
T Consensus 292 ~~~~~~~~~A~~~al~~AGl~~~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~ 371 (400)
T PRK13359 292 RVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALY 371 (400)
T ss_pred CccchhHHHHHHHHHHHhCCCHHHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999999999975 59999999999999999999999999999
Q ss_pred HHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 312 ALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 312 qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||+ +++|++++ |+|||+|.+++||.
T Consensus 372 qL~~~~~~~g~~~~----------------c~~gG~g~a~~ie~ 399 (400)
T PRK13359 372 QLERTGGRFALCTM----------------CIGVGQGIAIAIER 399 (400)
T ss_pred HHhhcCCCeEEEEE----------------cccCCceeEEEEEe
Confidence 9998 78999998 99999999999985
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-62 Score=542.54 Aligned_cols=336 Identities=37% Similarity=0.591 Sum_probs=297.0
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+. +.|++|++++.+|++.++|+++|+++|+||+.|+..|+++|++|++|++||+|+|+||+.|+........
T Consensus 54 ~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~ 133 (401)
T PRK09050 54 YGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSA 133 (401)
T ss_pred EEeccccccccchHHHHHHHHcCCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhh
Confidence 578887665 5899999999999997899999999999999999999999999999999999999999988522110011
Q ss_pred CC-CCccccc-----ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC
Q psy12877 80 YG-GMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR 153 (814)
Q Consensus 80 ~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~ 153 (814)
++ .....+. .....+.+.+....|+++|++|+++||+|||+||+||..||+|+.++.++|+|++||+|+.++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~ 213 (401)
T PRK09050 134 FSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQK 213 (401)
T ss_pred cccCcccccccccccccCCccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccC
Confidence 11 0011110 01122333344567999999999999999999999999999999999999999999999998877
Q ss_pred CCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 154 KGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 154 ~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
||++.++++|+++|+++|+|++.++||+|++ ++|+|++|||+++|||+|+||+|+++|++++.+|++||+|++....+|
T Consensus 214 ~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~-~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~ 292 (401)
T PRK09050 214 KGDPVVVDRDEHPRPETTLEALAKLKPVFRP-DGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP 292 (401)
T ss_pred CCCceeeCCCCCCCCCCCHHHHhcCCCcccC-CCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC
Confidence 7766678999999999999999999999954 488999999999999999999999999999999999999999988778
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC--CCcccCCCCccccCCCCChHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP--SKVNVHGGAVSLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gasG~~~l~e~v~ 311 (814)
..++.++..+++++|+++||+++|||++|+||+|++++++++|.||||+ .|+|++||.+++|||+|+||+++++|+++
T Consensus 293 ~~~~~~~~~a~~~al~~Agl~~~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~ 372 (401)
T PRK09050 293 RIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALH 372 (401)
T ss_pred ccccchHHHHHHHHHHHcCCCHHHCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHH
Confidence 7777888999999999999999999999999999999999999999987 49999999999999999999999999999
Q ss_pred HHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 312 ALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 312 qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||+ +++|++++ |+|||+|.+++||.
T Consensus 373 qLr~~~~~~g~~~~----------------c~~gG~g~a~~~e~ 400 (401)
T PRK09050 373 QLERTGGRYALCTM----------------CIGVGQGIALAIER 400 (401)
T ss_pred HHHhcCCCeEEEEE----------------cccccceeEEEEEe
Confidence 9998 78999998 99999999999984
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=538.21 Aligned_cols=323 Identities=33% Similarity=0.540 Sum_probs=289.8
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+.+.+. ++|++|++++.+|++.++|+++|+++|+||+.||..|+++|++|.+|+||++|+|+||+.|+... ..+
T Consensus 55 ~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~--~~~ 132 (402)
T PRK08242 55 LGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSD--GGA 132 (402)
T ss_pred EEecCCCccccccHHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCccccc--Ccc
Confidence 477877654 57999999999999878999999999999999999999999999999999999999999986321 111
Q ss_pred CCCCcccccccccCccc-ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCce
Q psy12877 80 YGGMNLIDGIVYDGLSD-VYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKAD 158 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~ 158 (814)
+ . .+.+.+ +.....|+++||+|+++||||||+||+||++||+||.+++++|+|.+||+|++ .+||+ .
T Consensus 133 ~----~-----~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~--~~~~~-~ 200 (402)
T PRK08242 133 W----A-----MDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVK--DQNGL-T 200 (402)
T ss_pred c----c-----cCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeee--cCCCC-E
Confidence 1 0 011111 22235799999999999999999999999999999999999999999999998 34444 5
Q ss_pred eeccCCccccCCCHHhhhcCCceeccC---CC-----------------ccccCCCCCcCceeeEEEEcCHHHHHHcCCC
Q psy12877 159 IIVNEDEEYKKINFEKFKSLATVFQKE---NG-----------------TVTAGNASTLNDGAAACVLMTEEAVRKFNAK 218 (814)
Q Consensus 159 ~~~~d~~~r~~~t~e~~~~~~~~~~~~---~~-----------------pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~ 218 (814)
++++||++|+++|+|++.++||+|++. +| ++|++|||+++|||+|+||+|+++|++++++
T Consensus 201 ~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~ 280 (402)
T PRK08242 201 ILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLK 280 (402)
T ss_pred eeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCC
Confidence 689999999999999999999999642 23 6999999999999999999999999999999
Q ss_pred ccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCC
Q psy12877 219 PLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298 (814)
Q Consensus 219 p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~ 298 (814)
|.++|+|++....+|..+..+|..+++++|+++||+++|||+||+||+|++++++++|+||||++|+|++||++++|||+
T Consensus 281 p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~ 360 (402)
T PRK08242 281 PRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPL 360 (402)
T ss_pred CcEEEEEEEEecCCchhhcccHHHHHHHHHHHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcH
Confidence 99999999999888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 299 GMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 299 gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|+||+++++++++||++ +++|++++ |+|||+|.+++||.
T Consensus 361 GAsG~~~~~~l~~~L~~~~~~~g~~~~----------------c~ggG~g~a~~~e~ 401 (402)
T PRK08242 361 GATGAMILGTVLDELERRGKRTALITL----------------CVGGGMGIATIIER 401 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEE----------------cccCCceeEEEEEe
Confidence 99999999999999987 78999998 99999999999984
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-61 Score=539.09 Aligned_cols=336 Identities=37% Similarity=0.601 Sum_probs=294.8
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+. ++|++|++++.+|++.++|+++|+++|+||+.|+..|+++|++|++|++||+|+|+||+.|+........
T Consensus 53 ~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~ 132 (400)
T TIGR02430 53 YGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSA 132 (400)
T ss_pred EEeccccccccccHHHHHHHHcCCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccc
Confidence 478887664 5899999999999997899999999999999999999999999999999999999999988522111111
Q ss_pred CC-CCccccc-----ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC
Q psy12877 80 YG-GMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR 153 (814)
Q Consensus 80 ~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~ 153 (814)
++ .....+. ...+.+.+.+....|++.|++|+++||+|||+||+||+.||+||..++++|+|++||+|+.++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~ 212 (400)
T TIGR02430 133 FSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQK 212 (400)
T ss_pred cccccccccccccccccCcccccccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccC
Confidence 11 0000110 01122333344568999999999999999999999999999999999999999999999998876
Q ss_pred CCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 154 KGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 154 ~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
+++...+++|+++|+++|+|++.++||+|++ +||+|++|||+++|||+|+||+|+++|++++.+|.+||+|++....+|
T Consensus 213 ~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p-~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~ 291 (400)
T TIGR02430 213 KGEPTVVDQDEHPRPETTLEGLAKLKPVVRP-DGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEP 291 (400)
T ss_pred CCCceeeCCCCccCCCCCHHHHhcCCCcccC-CCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCC
Confidence 5433568999999999999999999999953 378999999999999999999999999999999889999999987778
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC--CCcccCCCCccccCCCCChHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP--SKVNVHGGAVSLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gasG~~~l~e~v~ 311 (814)
..++.++..+++++|+++||+++|||++|+||+|++++++++|.||||+ .|+|++||++++|||+|+||+++++|+++
T Consensus 292 ~~~~~~~~~a~~~al~~Agl~~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~ 371 (400)
T TIGR02430 292 RIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALR 371 (400)
T ss_pred ccccchHHHHHHHHHHHhCCCHHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHH
Confidence 7777888999999999999999999999999999999999999999987 59999999999999999999999999999
Q ss_pred HHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 312 ALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 312 qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||+ +++|++++ |+|||+|.+++||.
T Consensus 372 qLr~~~~~~g~~~~----------------c~~gG~g~a~~~e~ 399 (400)
T TIGR02430 372 QLERSGGRYALCTM----------------CIGVGQGIALAIER 399 (400)
T ss_pred HHHhcCCCEEEEEE----------------ccccChhhEEEEEe
Confidence 9998 78999998 99999999999984
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=483.01 Aligned_cols=335 Identities=39% Similarity=0.642 Sum_probs=318.8
Q ss_pred CcccccCC-CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCc
Q psy12877 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGE 77 (814)
Q Consensus 1 ~g~~~~~~-~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~ 77 (814)
+|||++++ ++...+|++-+..|.|..+|+++||+.|.||.++|..+++.|.-|++++||+||.|+||.+|+..+ |.+
T Consensus 55 ~GNV~aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFG 134 (396)
T KOG1391|consen 55 MGNVLASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFG 134 (396)
T ss_pred EeeeeeccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeec
Confidence 68999887 588999999999999999999999999999999999999999999999999999999999998765 556
Q ss_pred ccCCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCc
Q psy12877 78 TKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA 157 (814)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~ 157 (814)
...|......+..+..+.+.+...+|+++||++..+|.|+||+.|+|+..|++++.+++++|+|++||+|++++.+||+.
T Consensus 135 T~LG~~y~lED~LW~sLtD~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~ 214 (396)
T KOG1391|consen 135 TKLGSDYKLEDSLWVSLTDQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQ 214 (396)
T ss_pred cccccccchhhhHhhhccchhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCce
Confidence 66777777777788899999999999999999999999999999999999999999999999999999999999888754
Q ss_pred eeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC
Q psy12877 158 DIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237 (814)
Q Consensus 158 ~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~ 237 (814)
.+.-||++|+.+|+|.+.++||+|.| +|.+|++|.+.++|||+|+|++||+..++++++|+|+|++|...+.+|..|+
T Consensus 215 -~f~vDEHpRp~TT~E~L~KLppvFkK-dG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMG 292 (396)
T KOG1391|consen 215 -TFQVDEHPRPQTTLEQLQKLPPVFKK-DGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMG 292 (396)
T ss_pred -eeEecCCCCccchHHHHhhCCchhcc-CCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhcc
Confidence 56779999999999999999999977 4999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 238 ~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
.+|++|++.+|+++|++++|||++|+||+|+.|.|...+.|+++-+++|++||++++|||+|+||+|+..+++++||+
T Consensus 293 IGPvPAI~~vLKksGlkl~DiDl~EvNEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~ 372 (396)
T KOG1391|consen 293 IGPVPAISGVLKKSGLKLKDIDLVEVNEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRG 372 (396)
T ss_pred ccCcHHHHHHHHHcCCcccccceEEechhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++||+.+. |+|||||.+++||+
T Consensus 373 ~KYgiGSA----------------CIGGGQGIA~l~e~ 394 (396)
T KOG1391|consen 373 GKYGIGSA----------------CIGGGQGIAVLIES 394 (396)
T ss_pred Cccccccc----------------cccCCceEEEEEEe
Confidence 89999998 99999999999985
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-62 Score=541.93 Aligned_cols=326 Identities=40% Similarity=0.639 Sum_probs=286.3
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccC---c
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG---E 77 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~---~ 77 (814)
+||+++.+.++|++|++++.+|++.++|.++++++|+||+.++.+|+++|++|++|+|||+|+|+||+.|+..... .
T Consensus 53 ~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~ 132 (388)
T PRK06366 53 MGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWG 132 (388)
T ss_pred EEecCCCCccCcHHHHHHHHCCCCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCccccccccccc
Confidence 3677766667789999999999987799999999999999999999999999999999999999999877532211 1
Q ss_pred ccC---CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCC
Q psy12877 78 TKY---GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRK 154 (814)
Q Consensus 78 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~ 154 (814)
.+. ......+.....++.+++....|++.|++||++||+|||++|+|++++|+||.+||++|+|++||+|+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~---- 208 (388)
T PRK06366 133 PKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND---- 208 (388)
T ss_pred ccccccccchhhhhhcccCccccccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc----
Confidence 000 0000111111233333333456999999999999999999999999999999999999999999999861
Q ss_pred CCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC
Q psy12877 155 GKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 234 (814)
Q Consensus 155 ~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~ 234 (814)
++.||++| ++|+|+++++||+++ ++|++|++|||+++|||+|+||+|+|+|++++.+|+++|+|++....+|.
T Consensus 209 -----~~~d~~~r-~~t~e~~~~s~~v~~-p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~ 281 (388)
T PRK06366 209 -----LDRDEGIR-KTTMEDLAKLPPAFD-KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPL 281 (388)
T ss_pred -----cccccCcc-cCCHHHHhhCCCccC-CCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHH
Confidence 67899999 899999999999994 24679999999999999999999999999999999999999999988888
Q ss_pred CCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHH
Q psy12877 235 DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314 (814)
Q Consensus 235 ~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr 314 (814)
++..+++.|++++|+++||+++|||++|+||+|++++++++|+|||+.+|||++||++++|||+|+||+++++|+++|||
T Consensus 282 ~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~ 361 (388)
T PRK06366 282 DFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALK 361 (388)
T ss_pred HhcccHHHHHHHHHHHcCCCHHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 315 S--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 315 ~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+ +++||+++ |+|||+|.+++||.
T Consensus 362 ~~~~~~g~~~~----------------c~~gg~g~a~~~e~ 386 (388)
T PRK06366 362 TRHMKTGLATL----------------CHGGGGAHTLTLEM 386 (388)
T ss_pred hcCCCeEEEEE----------------ecccChhhEEEEEe
Confidence 8 68999998 99999999999985
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-61 Score=535.06 Aligned_cols=329 Identities=32% Similarity=0.524 Sum_probs=293.8
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc---cC
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN---RG 76 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~---~~ 76 (814)
+||+++.+. ++|++|.+++..||+..+|+++|+++|+||++|+..|+++|++|++|+|||+|+|+||+.|+... +.
T Consensus 53 ~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~ 132 (390)
T PRK06504 53 MGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPA 132 (390)
T ss_pred EEeccccccccccHHHHHHHHcCCCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCcccccccccc
Confidence 478887655 58999999999999889999999999999999999999999999999999999999999885321 11
Q ss_pred cccCCCCcccccccccCccccc--ccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCC
Q psy12877 77 ETKYGGMNLIDGIVYDGLSDVY--NKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRK 154 (814)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~ 154 (814)
...++.. ..+.+.+.+ ...+|+..+++||++||+|||+||+||++||+||.+|+++|+|++||+|+++.+++
T Consensus 133 ~~~~~~~------~~~~~~~~~~~~~~~~~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~ 206 (390)
T PRK06504 133 KNGLGHY------KSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRAD 206 (390)
T ss_pred ccccccc------cccccccccCCCCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCC
Confidence 1111110 012222221 13468889999999999999999999999999999999999999999999988777
Q ss_pred CCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC
Q psy12877 155 GKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 234 (814)
Q Consensus 155 ~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~ 234 (814)
|++..+..||.+|+++|+|+++++||++ + ++++|++|||+++|||+|+||+|+++|++++.+|+++|.+++....++.
T Consensus 207 ~~~~~~~~De~~r~~~t~e~l~~~~~~~-~-~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~ 284 (390)
T PRK06504 207 GSGEMHTVDEGIRFDATLEGIAGVKLIA-E-GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPV 284 (390)
T ss_pred CCceEEccCCCCCCCCCHHHHhcCCCCC-C-CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCch
Confidence 8888899999999999999999999996 3 3899999999999999999999999999999999989999998888887
Q ss_pred CCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHH
Q psy12877 235 DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314 (814)
Q Consensus 235 ~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr 314 (814)
.+..++..|++++|+++||+++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+||++++.++++|||
T Consensus 285 ~~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr 364 (390)
T PRK06504 285 IMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALK 364 (390)
T ss_pred hhhccHHHHHHHHHHHcCCCHHHCCEEEecccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 315 S--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 315 ~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+ +++|++++ |+|||+|.+++||.
T Consensus 365 ~~~~~~gl~~~----------------~~ggg~g~a~ile~ 389 (390)
T PRK06504 365 QRGKRYGLQTM----------------CEGGGMANVTIVER 389 (390)
T ss_pred hhCCCeEEEEE----------------eecccceeEEEEEe
Confidence 8 78899997 99999999999974
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-61 Score=536.12 Aligned_cols=336 Identities=47% Similarity=0.737 Sum_probs=294.7
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGET 78 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~ 78 (814)
+|++.+.+.+.+++|.+++.+|++..+|+++|+++|+||++++..|+++|++|++|+|||+|+|+||+.|+... +...
T Consensus 53 ~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~ 132 (393)
T PRK08235 53 MGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGY 132 (393)
T ss_pred EEecccCCCCCCHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccccccccccc
Confidence 36666655577999999999999878999999999999999999999999999999999999999999885321 1111
Q ss_pred cCCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCce
Q psy12877 79 KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKAD 158 (814)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~ 158 (814)
+.+.....+.+..+++.+.+....|+++|++||++||+|||++|+|+++||+||.+|+++|+|++||+|+++.++||+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~ 212 (393)
T PRK08235 133 RMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPI 212 (393)
T ss_pred ccCCchhhhhhcccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCce
Confidence 11111111111112222333345799999999999999999999999999999999999999999999999988777777
Q ss_pred eeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC
Q psy12877 159 IIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238 (814)
Q Consensus 159 ~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~ 238 (814)
++++|+++|+++|+|+++++||++++ +||+|++|||+++|||+|+||+|+++|++++.+|+++|.|++....++..+..
T Consensus 213 ~~~~da~~r~~~t~e~~~~~~~v~~p-~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~ 291 (393)
T PRK08235 213 VVAKDEAPRKDTTIEKLAKLKPVFDK-TGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPR 291 (393)
T ss_pred EeCCCCCCCCCCCHHHHhcCCCcccC-CCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcc
Confidence 78999999999999999999999942 46799999999999999999999999999999999999999987777777777
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--C
Q psy12877 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--G 316 (814)
Q Consensus 239 ~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g 316 (814)
++..|++++|+++||+++|||++|+||+|+.++++++|+||||++|+|++||++++|||+|+||+++++|+++||++ +
T Consensus 292 ~~~~a~~~al~~agl~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~ 371 (393)
T PRK08235 292 TPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGG 371 (393)
T ss_pred hHHHHHHHHHHHhCCCHHHCCeehhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999998 7
Q ss_pred CCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++|++++ |+|||+|.++|||.
T Consensus 372 ~~g~~~~----------------c~~gG~g~a~~~e~ 392 (393)
T PRK08235 372 GIGIAAI----------------CSGGGQGDAVLIEV 392 (393)
T ss_pred CeEEEEE----------------cccccceEEEEEEe
Confidence 8999998 99999999999984
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-61 Score=533.19 Aligned_cols=334 Identities=40% Similarity=0.611 Sum_probs=293.4
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcc
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGET 78 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~ 78 (814)
|++.+.+. +.+++|.+++.+|++..+|+++|+++|+||+.++..|+++|++|.+|+|||+|+|+||+.|+... +...
T Consensus 55 g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~ 134 (394)
T PRK09051 55 GHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGA 134 (394)
T ss_pred eeeccccCCCccHHHHHHHHcCCCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCccccccccccc
Confidence 56665443 46899999999999867999999999999999999999999999999999999999999875211 1111
Q ss_pred cCCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCce
Q psy12877 79 KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKAD 158 (814)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~ 158 (814)
..+.....+.. ...+.+++....|++.|++||++||+|||++|+||++||+||.+|+.+|+|++||+|+.+++++++ .
T Consensus 135 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~-~ 212 (394)
T PRK09051 135 RMGDAKLVDMM-VGALHDPFGTIHMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGE-V 212 (394)
T ss_pred ccCCchhhhhh-cccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCC-e
Confidence 11111111111 112223333446999999999999999999999999999999999999999999999998876654 6
Q ss_pred eeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC
Q psy12877 159 IIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238 (814)
Q Consensus 159 ~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~ 238 (814)
++++|+++|+++|+|++.++||+|++.+||+|++|||+++|||+|+||+|+++|++++.+|++||+|++....+|..++.
T Consensus 213 ~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~ 292 (394)
T PRK09051 213 VFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGI 292 (394)
T ss_pred EECCCCCCCCCCCHHHHcCCCCcccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccc
Confidence 68999999999999999999999964348999999999999999999999999999999999999999999888887888
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--C
Q psy12877 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--G 316 (814)
Q Consensus 239 ~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g 316 (814)
++..|++++|+++||+++|||+||+||+|++++++++|.|||+++|||++||++++|||+|+||+++++++++||++ +
T Consensus 293 ~~~~a~~~al~~agi~~~did~~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~ 372 (394)
T PRK09051 293 GPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGG 372 (394)
T ss_pred cHHHHHHHHHHHcCCCHHHcCEEEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 6
Q ss_pred CCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++|++++ |+|||+|.+++||.
T Consensus 373 ~~g~~~~----------------c~~gG~g~a~~~e~ 393 (394)
T PRK09051 373 RYALVTM----------------CIGGGQGIAAIFER 393 (394)
T ss_pred CEEEEEE----------------ccccChhhEEEEEe
Confidence 8999998 99999999999984
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=535.65 Aligned_cols=337 Identities=34% Similarity=0.549 Sum_probs=294.3
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCcccc--Ccc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR--GET 78 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~--~~~ 78 (814)
+|++.+.+.+++++|++++.+|++..+|+++|+++|+||+.++.+|+++|++|.+|+|||+|+|+||+.+..... ...
T Consensus 53 ~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~ 132 (404)
T PRK06205 53 FGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGV 132 (404)
T ss_pred EEeccCCCCCChHHHHHHHHcCCCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCccccccccccc
Confidence 366767666789999999999998779999999999999999999999999999999999999999987742211 111
Q ss_pred cCCCCcccccccccCcc---c-ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCC
Q psy12877 79 KYGGMNLIDGIVYDGLS---D-VYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRK 154 (814)
Q Consensus 79 ~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~ 154 (814)
..+.....+.+..+.+. . ......|+.++++||++||+|||+||+||++||+||.++++.|+|++||+|++++++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~ 212 (404)
T PRK06205 133 RGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRK 212 (404)
T ss_pred ccCcchhhhhhccCcccccccccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCC
Confidence 11111011111111111 1 1123468888999999999999999999999999999999999999999999998877
Q ss_pred CCceeeccCCccccCCCHHhhhcCCceecc--CCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC
Q psy12877 155 GKADIIVNEDEEYKKINFEKFKSLATVFQK--ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE 232 (814)
Q Consensus 155 ~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~--~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~ 232 (814)
|++.++++|+++|+++|+|+++++||+|++ ++||+|++|||+++|||+|+||+|+++|++++.+|+++|.|++....+
T Consensus 213 ~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~ 292 (404)
T PRK06205 213 GDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVE 292 (404)
T ss_pred CCceEeccCCCCCCCCCHHHHhcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccC
Confidence 777778999999999999999999999952 458999999999999999999999999999999999999999999888
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC---CCcccCCCCccccCCCCChHHHHHHHH
Q psy12877 233 PIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHL 309 (814)
Q Consensus 233 p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~ 309 (814)
|..++.++..|++++|+++||+++|||++|+||+|++++++++|+||||+ +|+|++||++++|||+|+||+++++|+
T Consensus 293 ~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~ 372 (404)
T PRK06205 293 PSRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATL 372 (404)
T ss_pred CccccccHHHHHHHHHHHcCCCHHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHH
Confidence 87777899999999999999999999999999999999999999999998 589999999999999999999999999
Q ss_pred HHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 310 CHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 310 v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++||++ +++||+++ |+|||+|.++|||.
T Consensus 373 ~~qL~~~~~~~gl~~~----------------c~~gg~g~a~~~e~ 402 (404)
T PRK06205 373 LRELQRRQARYGLETM----------------CIGGGQGLAAVFER 402 (404)
T ss_pred HHHHHhcCCCeEEEEE----------------eccCChhhEEEEEe
Confidence 999998 68999998 99999999999984
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-61 Score=533.09 Aligned_cols=335 Identities=40% Similarity=0.666 Sum_probs=294.8
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCcc-ccCccc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL-NRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~-~~~~~~ 79 (814)
+||+++.+.++|++|++++.+|++..+|+++|+++|+||+.|+.+|+++|++|++|++||+|+|+||+.|... .+...+
T Consensus 54 ~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~ 133 (392)
T PRK06633 54 LGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAK 133 (392)
T ss_pred EEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccc
Confidence 5888887778899999999999997899999999999999999999999999999999999999999876421 111111
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++.....+....+.+.+.++...|++.|++||++||+|||++|+||++||+||..||++++|++||+|++++.+||. .+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~-~~ 212 (392)
T PRK06633 134 FGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTT-SL 212 (392)
T ss_pred cCcchhhhhhcccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCc-ee
Confidence 11111111111222223333447999999999999999999999999999999999999999999999987654443 56
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
++.|+.+|+.+++|.+.+++|+|++ .+|+|++|||+++|||+++||+|+++|++++.+|+++|+|++...++|..++.+
T Consensus 213 ~~~d~~~rp~~~~e~l~~l~p~~~~-~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~ 291 (392)
T PRK06633 213 FDHDETVRPDTSLEILSKLRPAFDK-NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTA 291 (392)
T ss_pred eccCCCCCCCCCHHHHccCCCccCC-CCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchH
Confidence 8999999999999999999999954 489999999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++||+++|||++|+||+|+++++++.|.||++..|+|++||++++|||+|+||+++++++++||++ ++
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~~~~ 371 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKAK 371 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999999999999999999999999999998899999999999999999999999999999998 68
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 372 ~g~~~~----------------c~~gG~g~a~~~e~ 391 (392)
T PRK06633 372 KGLVTL----------------CIGGGMGMAMCVEA 391 (392)
T ss_pred eEEEEE----------------ecccChhheEEEEe
Confidence 999998 99999999999984
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-60 Score=526.13 Aligned_cols=325 Identities=33% Similarity=0.472 Sum_probs=286.4
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+.+.+. ++|++|++++.+|++..+|+++|+++|+||++|+..|++.|++|++|+|||+|+|+||+.|+.... ...
T Consensus 53 ~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~-~~~ 131 (387)
T PRK07850 53 GGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANA-GPG 131 (387)
T ss_pred EEeccccccccchHHHHHHHhCCCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccc-ccc
Confidence 477776665 479999999999999889999999999999999999999999999999999999999998852211 111
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecC--CC---
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQ--RK--- 154 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~--~~--- 154 (814)
.+.....+ ++ +....|+..+++||++||+|||+||+||++||+||.+++++|+|++||+|+.++. ++
T Consensus 132 ~~~~~~~~-------~~-~~~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np 203 (387)
T PRK07850 132 RGLPRPDS-------WD-IDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQP 203 (387)
T ss_pred ccCccccc-------cc-cCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeeccccccccc
Confidence 11100000 11 1124578899999999999999999999999999999999999999999998763 23
Q ss_pred -CCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 155 -GKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 155 -~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
++...+..||.+| ++|+|++.+++|+| .++.+|.+|||+++|||+|+||+|+++|++++.+|.++|.+++....+|
T Consensus 204 ~~~~~~~~~D~~~r-~~t~e~l~~l~p~~--~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~ 280 (387)
T PRK07850 204 TGETRLVTRDQGLR-DTTMEGLAGLKPVL--EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEP 280 (387)
T ss_pred CCCceEeecCCCcc-cCCHHHhccCCCCC--CCCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCc
Confidence 2324589999999 99999999999998 2356799999999999999999999999999999988999999987788
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHAL 313 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qL 313 (814)
..+..++..+++++|+++||+++|||++|+||+|++++++++|.||++.+|+|++||++++|||+|+||+++++|+++||
T Consensus 281 ~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL 360 (387)
T PRK07850 281 YYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHEL 360 (387)
T ss_pred hhhcchHHHHHHHHHHHcCCCHHHcCeeeecccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 314 KS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 314 r~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|+ +++||+++ |+|||+|.+++||.
T Consensus 361 ~~~~~~~g~~~~----------------c~~gg~g~a~~~e~ 386 (387)
T PRK07850 361 ERTDKSTALITM----------------CAGGALSTGTIIER 386 (387)
T ss_pred HhcCCCeEEEEE----------------ccccCceeEEEEEe
Confidence 87 78999998 99999999999985
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-60 Score=526.60 Aligned_cols=335 Identities=34% Similarity=0.566 Sum_probs=291.5
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+. ++|++|++++.+|+|..+|+++|+++|+||+.|+.+|+++|++|++|++||+|+|+||+.|+........
T Consensus 53 ~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~ 132 (401)
T PRK08131 53 LGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESA 132 (401)
T ss_pred EEeccccccccccHHHHHHHhcCCCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccc
Confidence 478887765 6899999999999998899999999999999999999999999999999999999999988532211011
Q ss_pred CC-CCccccccc-----ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC
Q psy12877 80 YG-GMNLIDGIV-----YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR 153 (814)
Q Consensus 80 ~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~ 153 (814)
.+ ....++... ...+.+.+....|+++|++||++||+|||++|+||++||+|+..+.++++|+++|+|+++++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~ 212 (401)
T PRK08131 133 FSRDAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQG 212 (401)
T ss_pred cccCcchhhhhhcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccc
Confidence 11 001111110 111222234567999999999999999999999999999999999999999999999988652
Q ss_pred -CCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC
Q psy12877 154 -KGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE 232 (814)
Q Consensus 154 -~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~ 232 (814)
++....+..||.+|+++|+|.|.++||+| + ++++|++|||+++|||+|+||+|+++|++++.+|+++|+|++....+
T Consensus 213 ~~~~~~~v~~De~~r~~~~~e~L~~l~p~f-~-~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~ 290 (401)
T PRK08131 213 RKLPPKLVAEDEHPRPSSTVEALTKLKPLF-E-GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVE 290 (401)
T ss_pred cCCCceEEecCCCCCCCCCHHHHhcCCCCC-C-CCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccC
Confidence 22234588999999999999999999999 3 38999999999999999999999999999999999999999999888
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC--CCcccCCCCccccCCCCChHHHHHHHHH
Q psy12877 233 PIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP--SKVNVHGGAVSLGHPIGMSGARIVIHLC 310 (814)
Q Consensus 233 p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gasG~~~l~e~v 310 (814)
|..++.++..+++++|+++||+++|||++|+||+|+++++.++|+||||. .|+|++||++++|||+|+||+++++|++
T Consensus 291 ~~~~~~~~~~a~~~a~~~agl~~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~ 370 (401)
T PRK08131 291 PRIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAA 370 (401)
T ss_pred CccccchHHHHHHHHHHHcCCCHHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999974 4999999999999999999999999999
Q ss_pred HHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 311 HALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 311 ~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|||+ +++|+.++ |+|||+|.+++||.
T Consensus 371 ~qL~~~~~~~~~~~~----------------~~ggg~g~a~i~e~ 399 (401)
T PRK08131 371 RELQRRGKRYAVVSL----------------CIGVGQGLAMVIER 399 (401)
T ss_pred HHHHhcCCCceEEEE----------------EecCChhhEEEEEe
Confidence 99998 67899997 99999999999986
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-60 Score=531.38 Aligned_cols=334 Identities=30% Similarity=0.516 Sum_probs=287.6
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc-
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK- 79 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~- 79 (814)
+||+++.+.++|++|++++.+|++..+|+++|+++|+||++|+..|+++|++|++|+|||+|+|+||+.|+.......+
T Consensus 56 ~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~ 135 (428)
T PRK08963 56 FGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARA 135 (428)
T ss_pred EeccCCCCCccHHHHHHHHHCCCCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccc
Confidence 5788776667899999999999997899999999999999999999999999999999999999999988532110000
Q ss_pred ---------CCC-Cc------ccccc-cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q psy12877 80 ---------YGG-MN------LIDGI-VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFS 142 (814)
Q Consensus 80 ---------~~~-~~------~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~ 142 (814)
.+. .. ....+ ....+.++.+...|++.|++||++||+|||++|+||++||+||..|+++|+|.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~ 215 (428)
T PRK08963 136 LVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLD 215 (428)
T ss_pred hhccccccccCcccccccccchhhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 000 00 00000 01112222224579999999999999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEE
Q psy12877 143 SQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLAR 222 (814)
Q Consensus 143 ~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~ 222 (814)
+||+|+.+++++ ..+..||.+|+++|+|+++++||+++.++|++|++|||+++|||+|+||+|+++|++++.+|++|
T Consensus 216 ~ei~p~~~~p~a---~~~~~D~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~ 292 (428)
T PRK08963 216 DEVMTAHVPPYK---QPLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGY 292 (428)
T ss_pred cceeeEEecCCc---eeeCCCCCCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEE
Confidence 999999875432 25899999999999999999999995445789999999999999999999999999999999999
Q ss_pred EEEEEEecCCCC-CCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcC-----------------CCCCC
Q psy12877 223 IIAYFDAATEPI-DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLD-----------------IDPSK 284 (814)
Q Consensus 223 I~g~~~~~~~p~-~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg-----------------~~~~~ 284 (814)
|.+++....+|. .+..++..+++++|+++||+++|||++|+||+|++++++++|+|| ++.+|
T Consensus 293 i~g~~~~~~~~~~~~~~~~~~a~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~p 372 (428)
T PRK08963 293 LRSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSK 372 (428)
T ss_pred EEEEecccCCchhhhhhHHHHHHHHHHHHcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCc
Confidence 999999876663 456778899999999999999999999999999999999999994 55569
Q ss_pred cccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 285 VNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 285 vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++||++++|||+|+||+++++|+++|||+ +++||+++ |+|||+|.+++||.
T Consensus 373 vN~~GG~la~GhP~gasG~~~~~e~~~qLrg~~g~~gl~~~----------------c~ggG~g~a~~ie~ 427 (428)
T PRK08963 373 FNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGLGLTTA----------------CAAGGLGAAMVLEV 427 (428)
T ss_pred cCCCCCHHhcCCCccccHHHHHHHHHHHHhhcCCCEEEEEE----------------ccccChhhEEEEEe
Confidence 9999999999999999999999999999998 78999998 99999999999985
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-59 Score=523.41 Aligned_cols=326 Identities=31% Similarity=0.466 Sum_probs=288.4
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+. ++|++|++++.+|++..+|+++|+++|+||+.|+.+|+++|++|++|++||+|+|+||+.|.... ..
T Consensus 53 ~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~---~~ 129 (385)
T TIGR02445 53 WGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHG---VD 129 (385)
T ss_pred EecccccccccchHHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccC---CC
Confidence 477776555 67899999999999988999999999999999999999999999999999999999999875211 00
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
. .....+.... ....|++.+++||++||+|||++|+||++||+||.+|+++|+|++||+|+++++++|.+.+
T Consensus 130 ~------~~~~~~~~~~--~~~~~~~~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~ 201 (385)
T TIGR02445 130 F------HPGMSLHVAK--AAGMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQ 201 (385)
T ss_pred c------chhHHhhhcc--ccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCcee
Confidence 0 0000010111 1247999999999999999999999999999999999999999999999999877666667
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+++|+++|+|+++++||++++.+|.+|++|||+++|||+|+||+++++|++++.+|+++|+|++....+|..++.+
T Consensus 202 ~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~ 281 (385)
T TIGR02445 202 FDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYG 281 (385)
T ss_pred eCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchh
Confidence 89999999999999999999999322345999999999999999999999999999999989999999988788777778
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC---CCcccCCCCccccCCCCChHHHHHHHHHHHHHc-
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS- 315 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~- 315 (814)
+..+++++|+++||+++|||++|+||+|++++++++|+||||+ .|+|++||++++|||+|+||++++.+++++|++
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~ 361 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQK 361 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999987 599999999999999999999999999966655
Q ss_pred -CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 -GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 -g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++|++++ |+|||+|.+++||.
T Consensus 362 ~~~~Gl~~~----------------~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 362 DATFGLATM----------------CIGLGQGIATVFER 384 (385)
T ss_pred CCCeEEEEE----------------ecccChhheEEEEe
Confidence 67899998 99999999999984
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-59 Score=525.79 Aligned_cols=334 Identities=29% Similarity=0.489 Sum_probs=287.3
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccC--c-
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG--E- 77 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~--~- 77 (814)
+||+++.+.+.|++|++++.+|++..+|+++|+++|+||+.|+.+|+++|++|++|+|||+|+|+||+.|+..... .
T Consensus 58 ~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~ 137 (430)
T TIGR02446 58 FGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAAS 137 (430)
T ss_pred EEeccCcCccchHHHHHHHhCCCCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCccccccccccc
Confidence 5788876667899999999999998999999999999999999999999999999999999999999988533210 0
Q ss_pred -------ccCCC-Cc------ccccccccCc-ccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q psy12877 78 -------TKYGG-MN------LIDGIVYDGL-SDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFS 142 (814)
Q Consensus 78 -------~~~~~-~~------~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~ 142 (814)
...+. .. ..+.+..+.. .++.+...|++.|++||++||+|||+||+||++||+||.+|+++|+|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~ 217 (430)
T TIGR02446 138 LVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLA 217 (430)
T ss_pred ccccccccccCccccccccchhhhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 00000 00 0000000111 111124469999999999999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEE
Q psy12877 143 SQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLAR 222 (814)
Q Consensus 143 ~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~ 222 (814)
+||+|+..++++ .+++.||.+|+++|+|+|+++||+|++..||+|++|||+++|||+|+||+|+++|++++.+|+++
T Consensus 218 ~ei~p~~~np~a---~~~~~D~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~ 294 (430)
T TIGR02446 218 GEVMTAFPPPYK---QWIAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGY 294 (430)
T ss_pred ceeeeeeecCCc---eEecccCCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEE
Confidence 999999754332 45899999999999999999999995445889999999999999999999999999999999899
Q ss_pred EEEEEEecCCC-CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcC-----------------CCCCC
Q psy12877 223 IIAYFDAATEP-IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLD-----------------IDPSK 284 (814)
Q Consensus 223 I~g~~~~~~~p-~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg-----------------~~~~~ 284 (814)
|.+++....++ ..+..++..+++++|+++||+++|||++|+||+|++++++++|+|| ++.+|
T Consensus 295 i~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~p 374 (430)
T TIGR02446 295 IRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSK 374 (430)
T ss_pred EEEEEeeccCchHhhcccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCc
Confidence 99999887776 3567788899999999999999999999999999999999999997 55569
Q ss_pred cccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 285 VNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 285 vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
||++||++++|||+|+||+++++|+++|||+ +++|++++ |++||+|.+++||.
T Consensus 375 vN~~GG~la~GhP~gatG~~~v~e~~~qL~g~ag~~g~~~~----------------~~~GG~g~a~iie~ 429 (430)
T TIGR02446 375 FNVLGGSIAYGHPFAATGARMITQTLRELKRRGGGLGLNTA----------------CAAGGLGAAMILEV 429 (430)
T ss_pred cCCCCCHHhcCCCccccHHHHHHHHHHHHhhcCCCccEEEE----------------EecCcceEEEEEEe
Confidence 9999999999999999999999999999998 77899887 99999999999985
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-59 Score=519.48 Aligned_cols=326 Identities=32% Similarity=0.479 Sum_probs=288.8
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+.+.+. +++++|++++.+|++..+|+++|+++|+||+.|+.+|+++|++|++|+|||+|+|+||+.|.... ..
T Consensus 55 ~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~---~~ 131 (387)
T PRK08947 55 WGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHG---VD 131 (387)
T ss_pred EEeccccccccccHHHHHHHHcCCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccc---cC
Confidence 467766555 58999999999999977999999999999999999999999999999999999999998875211 00
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
+. ....+.+.. ....|++.|++||++||+|||++|+||++||+||.+|+.+|+|.+||+|+.+++++|.+..
T Consensus 132 ~~------~~~~~~~~~--~~~~~~~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~ 203 (387)
T PRK08947 132 FH------PGLSKNVAK--AAGMMGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKL 203 (387)
T ss_pred cc------hhhhhhccc--cchHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCcee
Confidence 00 000011111 1247999999999999999999999999999999999999999999999999887776677
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+++|+++|+|+++++||++++.++.+|++|||+++|||+|+||+|+++|++++.+|+++|.|++....++..+..+
T Consensus 204 ~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~ 283 (387)
T PRK08947 204 FDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYG 283 (387)
T ss_pred ecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCccccccc
Confidence 89999999999999999999999322244999999999999999999999999999999988999999987777777778
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC---CcccCCCCccccCCCCChHHHHHHHHHHHHHc-
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS- 315 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~- 315 (814)
+..+++++|+++||+++|||++|+||+|++++++++|+||||++ |+|++||++++|||+|+||++++.++++||++
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~ 363 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERK 363 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999874 99999999999999999999999999999997
Q ss_pred -CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 -GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 -g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++|++++ |+|||+|.+++||.
T Consensus 364 ~~~~gl~~~----------------~~g~G~g~a~~~e~ 386 (387)
T PRK08947 364 DAQFGLATM----------------CIGLGQGIATVFER 386 (387)
T ss_pred CCCEEEEEE----------------eecccceeEEEEEe
Confidence 68899998 99999999999984
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-59 Score=519.94 Aligned_cols=336 Identities=42% Similarity=0.652 Sum_probs=294.3
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.++++++.+++.+|++..+|+++|+++|+||+.++.+|+++|++|.+|+|||+|+|+||+.|+... +...+
T Consensus 54 g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~ 133 (393)
T PRK05656 54 GQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLR 133 (393)
T ss_pred EEecCCCCCCcHHHHHHHHcCCCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCcccccccccccc
Confidence 5555544577899999999999856999999999999999999999999999999999999999999886322 11111
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++..........+.+++.+.+..|++.+++||++||+|||++|+||++||+||..|+..++|++||+|+++.+.++++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~ 213 (393)
T PRK05656 134 MGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLA 213 (393)
T ss_pred ccchhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceE
Confidence 11111111111122333223457999999999999999999999999999999999999999999999998766655667
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
++.||.+|+++|+|.+.++||+|.+ ++++|++|||+++|||+|+||+|+++|++++.+|+++|+|++....+|..++.+
T Consensus 214 ~~~D~~~r~~~~~e~l~~l~p~~~~-~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~ 292 (393)
T PRK05656 214 FATDEQPRAGTTAESLAKLKPAFKK-DGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIG 292 (393)
T ss_pred eccCCCCCCCCCHHHHhcCCCCcCC-CCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchh
Confidence 8999999999999999999999953 478999999999999999999999999999999999999999998888888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++||+++|||++|+||+|+.++++++|.||++.+|+|++||++++|||+|+||+++++|+++||+. ++
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~ 372 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAK 372 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+||+++ |+|||+|.+++||.+
T Consensus 373 ~gl~~~----------------c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 373 KGLATL----------------CIGGGQGVALAIERD 393 (393)
T ss_pred EEEEEE----------------cccCcceEEEEEecC
Confidence 999998 999999999999963
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-59 Score=518.78 Aligned_cols=334 Identities=44% Similarity=0.702 Sum_probs=290.4
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGET 78 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~ 78 (814)
+||+.+.+.+++++|+.++.+|+|..+|+++|+++|+||+.++.+|+++|++|++|++||+|+|+||+.|+... +...
T Consensus 58 ~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~ 137 (397)
T PRK06954 58 MGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGM 137 (397)
T ss_pred EEecCCCccchHHHHHHHHcCCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCccccccc
Confidence 46777666678999999999999977999999999999999999999999999999999999999998775321 1111
Q ss_pred cCCCCcccccccccCccccc-ccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCc
Q psy12877 79 KYGGMNLIDGIVYDGLSDVY-NKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA 157 (814)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~ 157 (814)
+.+.....+....+.+.+.+ ....|++.+++||++||+|||++|+||++||+||.+++..++|.++++|+++.++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~- 216 (397)
T PRK06954 138 RMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGD- 216 (397)
T ss_pred ccCcchhhhhhcccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCC-
Confidence 11111111111112222222 2457999999999999999999999999999999988778899999999998765443
Q ss_pred eeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC
Q psy12877 158 DIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237 (814)
Q Consensus 158 ~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~ 237 (814)
.++++||++| ++++|.+.+++|+|++ +|++|.+|||+++|||+|+||+|+++|++++.+|+++|+|++....+|..+.
T Consensus 217 ~~v~~D~~pr-~~~~~~l~~l~~~f~~-~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~ 294 (397)
T PRK06954 217 TVIDRDEQPF-KANPEKIPTLKPAFSK-TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFT 294 (397)
T ss_pred eEeccCCCcC-CCCHHHHhCCCCccCC-CCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCccccc
Confidence 4689999999 5999999999999964 4889999999999999999999999999999999999999998777777778
Q ss_pred CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 238 ~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
.++..+++++|+++||+++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+||+++++|+++|||+
T Consensus 295 ~~~~~a~~~al~~agl~~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~ 374 (397)
T PRK06954 295 TAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARG 374 (397)
T ss_pred chHHHHHHHHHHHcCCCHHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcC
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++||+++ |+|||+|.+++||.
T Consensus 375 g~~~v~~~----------------c~~gg~g~a~~~e~ 396 (397)
T PRK06954 375 GKRGVASL----------------CIGGGEATAMGIEL 396 (397)
T ss_pred CCeEEEEE----------------ccccchhhEEEEEe
Confidence 78999998 99999999999984
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-59 Score=516.95 Aligned_cols=326 Identities=34% Similarity=0.554 Sum_probs=288.7
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+.+.+. +++++|++++.+|++..+|+++|+++|+||+.|+..|+++|++|++|++||+|+|+||+.|+.....
T Consensus 54 ~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~--- 130 (391)
T PRK07661 54 IGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVV--- 130 (391)
T ss_pred EEeccccccccchHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCcccccc---
Confidence 366766554 5899999999999986699999999999999999999999999999999999999999987521100
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC----CC
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR----KG 155 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~----~~ 155 (814)
...... .+. .+.....|++.+++||++||+|||++|+||+++|+||..||++|+|++||+|++++.+ +|
T Consensus 131 -~~~~~~----~~~--~~~~~~~m~~~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~ 203 (391)
T PRK07661 131 -RPNPRL----VEA--APEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENN 203 (391)
T ss_pred -CCCccc----ccc--ccchhhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccC
Confidence 000000 000 1111235899999999999999999999999999999999999999999999998753 33
Q ss_pred C----ceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC
Q psy12877 156 K----ADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT 231 (814)
Q Consensus 156 ~----~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~ 231 (814)
+ ..+++.||.+|+++|+|.+.+++|+|+ .+||+|.+|||+++|||+|+||+|+++|++++.+|+++|+|++....
T Consensus 204 ~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~-~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~ 282 (391)
T PRK07661 204 KLQEETITFSQDEGVRADTTLEILGKLRPAFN-VKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGV 282 (391)
T ss_pred cccccceeEecCCCCCCCCCHHHHhcCCCCcC-CCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecC
Confidence 2 256899999999999999999999985 35999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHH
Q psy12877 232 EPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 232 ~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~ 311 (814)
+|..++.++..+++++|+++||+++|||+||+||+|+++++.++|+||||++|+|++||++++|||+|+||+++++|+++
T Consensus 283 ~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~ 362 (391)
T PRK07661 283 PPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIH 362 (391)
T ss_pred CCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHH
Confidence 88878888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 312 ALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 312 qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
||++ +++|++++ |+|||+|.+++||.
T Consensus 363 qL~~~~~~~g~~~~----------------c~~gg~g~a~~~e~ 390 (391)
T PRK07661 363 EMKRRNEQFGIVTM----------------CIGGGMGAAGVFEL 390 (391)
T ss_pred HHHhcCCCeEEEEE----------------ccccChhhEEEEEe
Confidence 9987 68999998 99999999999984
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-58 Score=515.77 Aligned_cols=331 Identities=32% Similarity=0.543 Sum_probs=289.2
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +.+++|++.+..+++..+|+++|+++|+||+.++.+|+++|++|.+|+|||+|+|+||+.|+. ... ...
T Consensus 60 g~~~~~~~~~~~~~~~~~l~a~~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~-~~~-~~~ 137 (394)
T PRK06445 60 GCALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMG-DNP-HIE 137 (394)
T ss_pred EeecCCCcccccHHHHHHHHcCCCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccc-cCc-ccc
Confidence 55555443 468899999999998889999999999999999999999999999999999999999987752 110 000
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
............. ++......|++.|++||++||+|||++|+|++++|+||.+|+.+|+|++||+|+++. ++|.+.++
T Consensus 138 ~~~~~~~~~~~~~-~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~~~~ 215 (394)
T PRK06445 138 PNPKLLTDPKYIE-YDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKKKVV 215 (394)
T ss_pred CChhhccccccCc-ccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCceee
Confidence 0000000000111 122233459999999999999999999999999999999999999999999999984 66666678
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++|+.+|+++|+|++++++|+|++ +||+|.+|||+++|||+|+||+|+++|++++.+|+++|+|++....+|..++.++
T Consensus 216 npda~~r~~~t~e~~~~~~~v~~~-~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~ 294 (394)
T PRK06445 216 DVDQSVRPDTSLEKLAKLPPAFKP-DGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGP 294 (394)
T ss_pred CCCCCCCCCCCHHHHhcCCCccCC-CCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchH
Confidence 999999999999999999999953 4799999999999999999999999999999999999999999988887788889
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCC
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQK 318 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~ 318 (814)
..+++++|+++||+++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+||+++++|+++||+. +++
T Consensus 295 ~~a~~~al~~Agl~~~dId~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~ 374 (394)
T PRK06445 295 VPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDY 374 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986 789
Q ss_pred CCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 319 GQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 319 gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|++++ |+|||+|.+++||.
T Consensus 375 gl~~~----------------~~~gg~g~a~~~e~ 393 (394)
T PRK06445 375 GVATL----------------CVGGGQGGAVVLER 393 (394)
T ss_pred EEEEE----------------cccCChhhEEEEEc
Confidence 99998 99999999999985
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-58 Score=513.00 Aligned_cols=328 Identities=36% Similarity=0.578 Sum_probs=288.6
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+.+.+. +.+++|.+++.+|++..+|+++|+++|+||+.|+.+|+++|++|++|+|||+|+|+||+.|+......
T Consensus 59 ~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~-- 136 (399)
T PRK09052 59 VGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPS-- 136 (399)
T ss_pred EEecCCCCCCCchHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccc--
Confidence 356665443 57999999999999866999999999999999999999999999999999999999999884211000
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC-----C
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR-----K 154 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~-----~ 154 (814)
.. ....+ .+. .......|++.|++||++||+|||++|+||++||+||.+||++|+|++||+|+++.++ +
T Consensus 137 ~~-~~~~~---~~~--~~~~~~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~ 210 (399)
T PRK09052 137 MS-PAIFA---RDE--NVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLAT 210 (399)
T ss_pred cC-cchhc---cCC--cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEecccccccccc
Confidence 00 00000 000 0111247999999999999999999999999999999999999999999999987654 3
Q ss_pred CCc----eeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEec
Q psy12877 155 GKA----DIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA 230 (814)
Q Consensus 155 ~~~----~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~ 230 (814)
|++ ..+..|+.+|+++|+|.+.++||+|.+ ++|+|++|||+++|||+|+||+|+++|++++.+|+++|+|++...
T Consensus 211 ~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~-~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~ 289 (399)
T PRK09052 211 GEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFAN-KGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAG 289 (399)
T ss_pred CcccccceEeccCCCCCCCCCHHHHhcCCCccCC-CCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEec
Confidence 322 468999999999999999999999953 589999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHH
Q psy12877 231 TEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLC 310 (814)
Q Consensus 231 ~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v 310 (814)
.+|..++.++..|++++|+++||+++|||++|+||+|+++++.++|.||+|++|+|++||++++|||+|+||++++++++
T Consensus 290 ~~~~~~~~~~~~A~~~al~~Agi~~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~ 369 (399)
T PRK09052 290 VPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVV 369 (399)
T ss_pred cCCCccchhHHHHHHHHHHHcCCCHHHcCEEEeCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHH
Confidence 88988888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 311 HALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 311 ~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+||++ +++|++++ |+|||+|.+++||.
T Consensus 370 ~~L~~~~~~~g~~~~----------------c~~gg~g~a~~~e~ 398 (399)
T PRK09052 370 HGLRRTNLKYGMVTM----------------CVGTGMGAAGIFER 398 (399)
T ss_pred HHHHhcCCCeEEEEE----------------cccCCceeEEEEEe
Confidence 99998 67899998 99999999999984
|
|
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-59 Score=470.31 Aligned_cols=328 Identities=36% Similarity=0.563 Sum_probs=295.5
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCC-CCccccCccc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV-PFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~-~~~~~~~~~~ 79 (814)
+|+|++.|.|..-+|..++++|+|+.+|..+||++|+||++|+..-+..|++|.+|+.|++|+|+|+.. |....
T Consensus 88 vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~----- 162 (435)
T KOG1389|consen 88 VGTVLAPGSGASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWP----- 162 (435)
T ss_pred eeeccCCCcchHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCc-----
Confidence 589999998888999999999999999999999999999999999999999999999999999999975 32111
Q ss_pred CCCCcccccc--cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeee--eecCCCC
Q psy12877 80 YGGMNLIDGI--VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPV--SIPQRKG 155 (814)
Q Consensus 80 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~--~~~~~~~ 155 (814)
....+- ......+ --.+||.+.|+++++||+||+++|++|+.||++|+++...|.|.+||+|+ ++.+.||
T Consensus 163 ----g~~~~~~~~~~~A~d--CllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g 236 (435)
T KOG1389|consen 163 ----GSINPRLQKFEKARD--CLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKG 236 (435)
T ss_pred ----cccChhhhhhhHHhh--cccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcC
Confidence 000000 0000011 12579999999999999999999999999999999999999999999999 4444444
Q ss_pred --CceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 156 --KADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 156 --~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
++.++..||.+|+.+|++.+.+++|+|++. |..|++|+++++|||+||+|+...+|.++|++.+++...|...+.+|
T Consensus 237 ~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkd-GttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P 315 (435)
T KOG1389|consen 237 DEKPITVSVDEGIRPNTTLESLAKLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPP 315 (435)
T ss_pred CccceeEecCCCCCCCcchhHHhhcchhhhcC-CccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCH
Confidence 456778899999999999999999999764 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHAL 313 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qL 313 (814)
..|+.+|+.|++++|+.+||+.+|||+|||||+|+.|.+.+.+.|++++++||++||++++|||+|+||+|++.+++++|
T Consensus 316 ~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~em 395 (435)
T KOG1389|consen 316 AIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEM 395 (435)
T ss_pred HHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hc----CCCCCccccccCccccccccceeEEecCCcceeEEEecCcc
Q psy12877 314 KS----GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPTL 356 (814)
Q Consensus 314 r~----g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~~ 356 (814)
++ .++|+++| |+|.|+|.+.++|.+..
T Consensus 396 Krrgkd~~~GVvSm----------------CIGtGmGaAAvFer~~~ 426 (435)
T KOG1389|consen 396 KRRGKDCRFGVVSM----------------CIGTGMGAAAVFERGGG 426 (435)
T ss_pred HhhccccccceEEE----------------eecCCcchheeeecCCC
Confidence 98 45899999 99999999999997653
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-57 Score=512.94 Aligned_cols=327 Identities=34% Similarity=0.561 Sum_probs=285.9
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++.+|++++.+|++..+|+++|+++|+||+.++..|+++|++|.+|+|||+|+|+||+.|..... ..
T Consensus 99 G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~---~~ 175 (452)
T PLN02287 99 GTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEG---GV 175 (452)
T ss_pred EeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhcc---cc
Confidence 56655554 467889999999998679999999999999999999999999999999999999999988742110 00
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecC---CCCC-
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQ---RKGK- 156 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~---~~~~- 156 (814)
. .... ..+...+ ...+|++.+++||++||+|||+||+||+++|+||..||++|+|++||+|+.++. ++|+
T Consensus 176 ~--~~~~--~~~~~~~--~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~ 249 (452)
T PLN02287 176 N--PRVE--SFSQAQD--CLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEE 249 (452)
T ss_pred C--chhh--ccccccc--cCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCc
Confidence 0 0000 0011111 123599999999999999999999999999999999999999999999998763 2132
Q ss_pred -ceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC
Q psy12877 157 -ADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID 235 (814)
Q Consensus 157 -~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~ 235 (814)
+..++.||.+|+++++|++.++||+|++ +||+|++|||+++|||+|+||+|+++|++++.+|++++.+++....+|..
T Consensus 250 ~~~~~~~De~~r~~~~~e~l~~l~~v~~~-~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~ 328 (452)
T PLN02287 250 KPIVISVDDGIRPNTTLADLAKLKPVFKK-NGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAV 328 (452)
T ss_pred cceeecccCCCCCCCCHHHHhcCCCccCC-CCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCcc
Confidence 2468899999999999999999999964 58999999999999999999999999999999999999999887777877
Q ss_pred CCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 236 FPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 236 ~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
++.++..+++++|+++||+++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+||+++++++++||++
T Consensus 329 ~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~ 408 (452)
T PLN02287 329 MGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 408 (452)
T ss_pred chHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred --C--CCCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 316 --G--QKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g--~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+ ++||+++ |+|||+|.+++||.-
T Consensus 409 ~~~~~~~gl~~~----------------c~ggG~g~a~~ie~~ 435 (452)
T PLN02287 409 RGKDCRFGVVSM----------------CIGTGMGAAAVFERG 435 (452)
T ss_pred cCCCCCeeEEEE----------------ccccCceeEEEEEec
Confidence 5 7999998 999999999999953
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-57 Score=507.24 Aligned_cols=336 Identities=46% Similarity=0.728 Sum_probs=291.6
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+.++++.+++.+|++..+|.++++.+|+|++.+|.+|+++|++|.+|+|||+|+|+||+.|.... +....
T Consensus 54 g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 133 (393)
T PRK05790 54 GQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQK 133 (393)
T ss_pred EEecCCCCCCcHHHHHHHHcCCCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccc
Confidence 4454544567899999999999867899999999999999999999999999999999999999998875211 11111
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
.+.....+........+++.+..|++.++|||++||+|||++++|++++|+||.+|+++|+|+++|+|+....+++++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~ 213 (393)
T PRK05790 134 MGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVV 213 (393)
T ss_pred cCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceE
Confidence 11100111111122222223457999999999999999999999999999999999999999999999998766555666
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
++.|++.|.+++.|++.+++|+|++ +|++|.+|||+++|||+|+||+|+|+|++++.+|+++|+|++....+|..+..+
T Consensus 214 ~~~d~~~~~~~~~e~l~~~~~v~~~-~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~ 292 (393)
T PRK05790 214 VDTDEHPRPDTTAESLAKLRPAFDK-DGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIG 292 (393)
T ss_pred ecCCCCCCCCCCHHHHhCCCCccCC-CCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchh
Confidence 7999999999999999999999964 489999999999999999999999999999999999999999988777767778
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||++|+||+|++++++++|+||||+.|+|++||++++|||+|+||+++++|+++|||+ ++
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~ 372 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGAK 372 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999998 68
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+||+++ |+|||+|+++|||.|
T Consensus 373 ~gl~~~----------------~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 373 KGLATL----------------CIGGGQGVALIVERP 393 (393)
T ss_pred eEEEEE----------------eccCCceeEEEEEcC
Confidence 899998 999999999999964
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=504.94 Aligned_cols=326 Identities=36% Similarity=0.594 Sum_probs=287.6
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+.+.+. ++|++|++++.+|++..+|+++|+++|+||+.||++|+++|++|++|+|||+|+|+||+.|.... ...
T Consensus 54 ~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~--~~~ 131 (392)
T PRK07108 54 MGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMN--RHM 131 (392)
T ss_pred EEEeecccccccHHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCC--CcC
Confidence 477777664 56899999999999977999999999999999999999999999999999999999999875221 001
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecC----C-C
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQ----R-K 154 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~----~-~ 154 (814)
.+ .....+...+.+ ..|+.++++++.+|+++||++|+|+..||++|..++++|+|++||+|++..+ + +
T Consensus 132 ~~-----~~~~~~~~~~~~--~~m~~~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a 204 (392)
T PRK07108 132 LR-----EGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKAT 204 (392)
T ss_pred cc-----chhhhccCCccc--cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEeccccccccc
Confidence 10 000001001111 3589999999999999999999999999999999999999999999997653 1 1
Q ss_pred C----CceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEec
Q psy12877 155 G----KADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA 230 (814)
Q Consensus 155 ~----~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~ 230 (814)
+ +...++.||++|+++|+|++.+++|+| + .+|+|++|||+++|||+|+||+|+++|++++.+|+++|+|++...
T Consensus 205 ~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~-~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~ 282 (392)
T PRK07108 205 GRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-P-GGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAG 282 (392)
T ss_pred CcccccceeEccCCCCCCCCCHHHHhcCCCCC-C-CCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEec
Confidence 1 134689999999999999999999998 2 389999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHH
Q psy12877 231 TEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLC 310 (814)
Q Consensus 231 ~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v 310 (814)
.+|..++.++..|++++|+++||+++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+||++++.+++
T Consensus 283 ~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~ 362 (392)
T PRK07108 283 CEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHAL 362 (392)
T ss_pred cCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 311 HALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 311 ~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++|++ +++|++++ |+|||+|.+++||.
T Consensus 363 ~~l~~~~~~~g~~~~----------------c~~gg~g~a~~ie~ 391 (392)
T PRK07108 363 IEGKRRGAKYVVVTM----------------CIGGGQGAAGLFEV 391 (392)
T ss_pred HHHHhhCCCEEEEEE----------------ccccChhhEEEEEe
Confidence 99987 67999998 99999999999984
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-57 Score=509.95 Aligned_cols=331 Identities=36% Similarity=0.568 Sum_probs=281.3
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCc----
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGE---- 77 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~---- 77 (814)
|++.+.+...+++|.++..+|++..+|+++++++|+||+.++.+|+++|++|.+|+|||+|+|+||+.|+......
T Consensus 55 g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~ 134 (426)
T PRK08170 55 GCAMPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWL 134 (426)
T ss_pred EeccCCCCcChHHHHHHHHhCcCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccch
Confidence 4555444456899999999999867999999999999999999999999999999999999999998775221100
Q ss_pred c----------cCCCC-cc-ccccc-----ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy12877 78 T----------KYGGM-NL-IDGIV-----YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNV 140 (814)
Q Consensus 78 ~----------~~~~~-~~-~~~~~-----~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~ 140 (814)
. +++.. .. ..... .+++.+++....|++.+++||++||+|||+||+|+++||+||..+++.|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~ 214 (426)
T PRK08170 135 AGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGR 214 (426)
T ss_pred hccccccccCccccccccccccccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 00000 00 00000 02223333335799999999999999999999999999999999999999
Q ss_pred CCCCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCcc
Q psy12877 141 FSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPL 220 (814)
Q Consensus 141 ~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~ 220 (814)
|+ ||+|++. ++++ .+.+||.+|+++|+|+++++||+|+++.+++|++|||+++|||+|+||+|+|+|++++.+|+
T Consensus 215 ~~-~i~pv~~--~~~n--p~a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~ 289 (426)
T PRK08170 215 LK-EVVPLFD--RDGK--FYDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPL 289 (426)
T ss_pred cc-eEeeeec--CCCC--eeccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCce
Confidence 98 9999982 3444 47899999999999999999999953447799999999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhh---hcCCCCC--------------
Q psy12877 221 ARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIK---KLDIDPS-------------- 283 (814)
Q Consensus 221 a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e---~lg~~~~-------------- 283 (814)
++|++++....+|..++.+++.|++++|+++||+++|||++|+||+|+++++++++ ++|||++
T Consensus 290 ~~i~~~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~ 369 (426)
T PRK08170 290 GRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRE 369 (426)
T ss_pred EEEEEeeEeeeCchhhcccHHHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcc
Confidence 99999999888888787888999999999999999999999999999999996665 7777654
Q ss_pred CcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 284 KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 284 ~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||++||+|++|||+|+||++++.++++|||+ +++|++++ |+|||+|.+++||.
T Consensus 370 pvN~~GG~la~GHP~GAtG~~~~~~l~~~l~~~~~~~g~~~~----------------c~~gg~g~a~~~e~ 425 (426)
T PRK08170 370 RLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTKRGIAAI----------------CIGGGQGGAMLLER 425 (426)
T ss_pred eecCCCCHHHhCCCccCccHHHHHHHHHHHHhhCCCeEEEEE----------------ecCCChhheEEEEe
Confidence 89999999999999999999999999999998 78999998 99999999999984
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-57 Score=508.05 Aligned_cols=328 Identities=31% Similarity=0.503 Sum_probs=275.5
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccC-cc-
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG-ET- 78 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~-~~- 78 (814)
+||+++.+.+.|++|++++..|++..+|+++|+++|+||+.++.+|+++|++|.+|++||+|+|+||+.|+..... ..
T Consensus 58 ~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~ 137 (427)
T PRK09268 58 AGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKI 137 (427)
T ss_pred EEecccCCccccHHHHHHHHcCCCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCccccccccccc
Confidence 4778776556899999999999987899999999999999999999999999999999999999999988532210 00
Q ss_pred ----c----CCC-C----cc-cccccc--cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q psy12877 79 ----K----YGG-M----NL-IDGIVY--DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFS 142 (814)
Q Consensus 79 ----~----~~~-~----~~-~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~ 142 (814)
. .+. . .. ...+.. +...+++....|++.+++||++||+|||+||+||++||+||.+++++|+|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~ 217 (427)
T PRK09268 138 LLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFD 217 (427)
T ss_pred ccccccccccCcccccccccccccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 0 000 0 00 000000 111122334569999999999999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCCceeccC-CCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccE
Q psy12877 143 SQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE-NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA 221 (814)
Q Consensus 143 ~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~-~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a 221 (814)
+||.|+. + ++.|+++|+++|+|+++++||+|++. +|++|++|||+++|||+|+||+|+++|++++.+|++
T Consensus 218 ~einP~~-----~----~~~D~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~ 288 (427)
T PRK09268 218 DLITPFL-----G----LTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLA 288 (427)
T ss_pred ccccCcc-----C----cccCCCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceE
Confidence 9999983 1 67899999999999999999999431 356999999999999999999999999999999986
Q ss_pred EEEEEEEecCCC----CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHh---hhcCCCCC-----------
Q psy12877 222 RIIAYFDAATEP----IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANI---KKLDIDPS----------- 283 (814)
Q Consensus 222 ~I~g~~~~~~~p----~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~---e~lg~~~~----------- 283 (814)
+|..+.....++ .++..++..|++++|+++||+++|||++|+||+|++++++++ |+||||++
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~ 368 (427)
T PRK09268 289 YLVDAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSI 368 (427)
T ss_pred EEEEEEEEcCCcccccchhhccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcC
Confidence 774444434444 446678889999999999999999999999999999977776 88888843
Q ss_pred ---CcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 284 ---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 284 ---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|+|++||+|++|||+|+||+++++|+++|||+ +++||+++ |+|||+|.+++||.
T Consensus 369 ~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~~~~~~gl~~~----------------c~~gG~g~a~~~e~ 427 (427)
T PRK09268 369 DRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEKGSGRGLISI----------------CAAGGQGVTAILER 427 (427)
T ss_pred CCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHhcCCCEEEEEE----------------cccCchheEEEEeC
Confidence 89999999999999999999999999999998 78999998 99999999999983
|
|
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-58 Score=469.26 Aligned_cols=348 Identities=57% Similarity=0.850 Sum_probs=322.6
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
.+++|+||++.|||+|.+.|++..++..+|..-|+++||+++.+++.+++.|++|++.+.+.|++++|++++-+|||..+
T Consensus 4 ~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv 83 (396)
T KOG1390|consen 4 SSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSV 83 (396)
T ss_pred CCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcce
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCc-cccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP-FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+++|+|..|+||+.||..|++.|+.|..|+|++||.|+||+.| ++..|...++|.....++...+++++.+.+.+||..
T Consensus 84 ~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~ 163 (396)
T KOG1390|consen 84 PATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGIC 163 (396)
T ss_pred eeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhccCCcchh
Confidence 9999999999999999999999999999999999999999999 555678888999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCcccc-CCHHHhhccccccccC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKE 613 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~-~~~e~l~~~~p~f~~~ 613 (814)
||+.+++|+||||+||.||+.|++++..++.++.|.+||+||+++.+.+ .+++++||+++. .+.+++.++||+|.++
T Consensus 164 aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg--~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ 241 (396)
T KOG1390|consen 164 AENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRG--ETVVKKDEEPKKGSNIEKLSKLRPVFKED 241 (396)
T ss_pred HhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCC--cEEeccchhhhcccchhhhccccceeecC
Confidence 9999999999999999999999999999999999999999999998888 467899999986 9999999999999988
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEehhhh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDENTT 692 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e~t~ 692 (814)
.+++|..|+|.++|||+|+||+|+|.++++|++|+|+|+||+.++.+|.+|.++|+.|++++|+.+|+ .||++|.|
T Consensus 242 ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~~E--- 318 (396)
T KOG1390|consen 242 GGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDYWE--- 318 (396)
T ss_pred CCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhhHHh---
Confidence 89999999999999999999999999999999999999999999999999999999999999999998 69999998
Q ss_pred hhchHHHHhccCCCCeEEEEecCcccHHhhhhCCCCCCCcccccccccEEEeCCCC
Q psy12877 693 QRLSEEAVCRAGKEGSIALISCPTLYPKIRELAPDAKDVPRELSAHYDLVVLDPPF 748 (814)
Q Consensus 693 ~~l~~~~~~~~~~~g~iA~~s~ps~~~~~~~~~~~~~~~~~~~~~~~d~~~~dppf 748 (814)
+++ ||..++..+.|+.+++|+..++ +---|-+-.|.
T Consensus 319 --iNE------------AFs~v~lA~iK~LgldP~kVNv------~GGAValGHPl 354 (396)
T KOG1390|consen 319 --INE------------AFSVVVLANIKKLGLDPSKVNV------HGGAVALGHPL 354 (396)
T ss_pred --hhh------------hhhHHHHHHHHHhCCCHhhccC------CCceeecCCCc
Confidence 444 6777788887777666654442 23445555565
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-55 Score=491.75 Aligned_cols=335 Identities=51% Similarity=0.801 Sum_probs=288.1
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++|++++.+|++..+|+.+|+++|+||+.++.+|+++|++|++|+|||+|+|+||+.|.... +....
T Consensus 53 g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~ 132 (394)
T PLN02644 53 GNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSR 132 (394)
T ss_pred EecCcCCcCCcHHHHHHHhcCCCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccc
Confidence 5555545577899999999999877999999999999999999999999999999999999999998774221 11111
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCc-e
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA-D 158 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~-~ 158 (814)
.+.....+......+.+++....|++.|++||++||+|||++|+|++++|+|+.+|++.+.|.+||+|+++..+++++ +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~ 212 (394)
T PLN02644 133 LGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSV 212 (394)
T ss_pred cccchhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCce
Confidence 111011000111222333334569999999999999999999999999999999999999999999999987554443 5
Q ss_pred eeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC
Q psy12877 159 IIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238 (814)
Q Consensus 159 ~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~ 238 (814)
+++.||.+| +.+.+.+.+++|+|++.+|.+|.+|||+++|||+++||+|++.|++++.+|+++|+|++...+.+..+..
T Consensus 213 ~~~~de~~~-~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~ 291 (394)
T PLN02644 213 IVDKDEGLG-KFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTT 291 (394)
T ss_pred EeecCCCcC-CCCHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccch
Confidence 578899997 7899999999999975468999999999999999999999999999999998999999998776666677
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--C
Q psy12877 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--G 316 (814)
Q Consensus 239 ~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g 316 (814)
++..+++++|+++|++++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+||+++++|+++|||+ +
T Consensus 292 ~~~~a~~~al~~Agi~~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~ 371 (394)
T PLN02644 292 APALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNG 371 (394)
T ss_pred hHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999998 6
Q ss_pred CCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++|++++ |+|||+|+++|||.
T Consensus 372 ~~g~~~~----------------~~~gg~g~a~~~e~ 392 (394)
T PLN02644 372 KYGVAGI----------------CNGGGGASAIVVEL 392 (394)
T ss_pred CeEEEEE----------------eccCCceeEEEEEe
Confidence 7899987 99999999999984
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-55 Score=484.16 Aligned_cols=308 Identities=34% Similarity=0.519 Sum_probs=277.9
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
+||+.+ .++|++|++++.+|++..+|+++|+++|+||+.+|..|++.|++|++|++||+|+|+||+.|+.. +. ..
T Consensus 49 ~G~~~~--~~~~~~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~-~~--~~ 123 (361)
T PRK06690 49 LGNVVG--PGGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQN-RA--RF 123 (361)
T ss_pred EEecCC--CcchHHHHHHHHcCCCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCccc-cc--cc
Confidence 466644 35889999999999998999999999999999999999999999999999999999999987521 10 01
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
. . + .+....|++.+++||++||+|||+||+||..||+|+.+++++++|++||+|++. +
T Consensus 124 ~-----~----~----~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~---------~ 181 (361)
T PRK06690 124 S-----P----E----TIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNG---------L 181 (361)
T ss_pred C-----c----c----cccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecccC---------c
Confidence 0 0 0 011124999999999999999999999999999999999999999999999871 3
Q ss_pred ccCCccccCCCHHhh-hcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 161 VNEDEEYKKINFEKF-KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~-~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
. |+++|+.+|+|++ .+++|+|++ ++++|++|||+++|||+|+||+|+++|++++.+|+++|.+++....+|..+..+
T Consensus 182 ~-d~~~r~~~~~e~ll~~l~p~~~~-~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~ 259 (361)
T PRK06690 182 L-DESIKKEMNYERIIKRTKPAFLH-NGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTG 259 (361)
T ss_pred c-ccccCCCCCHHHHhhcCCCcccC-CCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhH
Confidence 4 8999999999999 667999954 488999999999999999999999999999999998999999888788777888
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||+||+||+|+.++++++|.||+|++|+|++||++++|||+|+||++++.++++||++ ++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~~ 339 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDMK 339 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999987 68
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 340 ~g~~~~----------------c~~gG~g~a~~~e~ 359 (361)
T PRK06690 340 YGIATL----------------GIGGGIGLALLFEK 359 (361)
T ss_pred EEEEEE----------------cccCcceeEEEEEe
Confidence 999998 99999999999985
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-54 Score=482.17 Aligned_cols=328 Identities=47% Similarity=0.720 Sum_probs=283.3
Q ss_pred cccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCcccc---CcccC
Q psy12877 4 VCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR---GETKY 80 (814)
Q Consensus 4 ~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~---~~~~~ 80 (814)
+.+...++++++.++..+|++..+|+++++++|+|++.++.+|+++|++|.+|+|||+|+|++|+.+..... .....
T Consensus 51 ~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~ 130 (386)
T TIGR01930 51 VLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDP 130 (386)
T ss_pred ccCCCCCChHHHHHHHHcCCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcccccccccccccc
Confidence 333333477899999999998568999999999999999999999999999999999999999987643211 11111
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+..........+++.++++...|++.+++||++||+|||++++|++++|+||..|+++|++++||+|.....++ +..++
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~-~~~~~ 209 (386)
T TIGR01930 131 GRFELEDQILKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRK-GPVTV 209 (386)
T ss_pred CccccchhhcCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCC-CCeEe
Confidence 11111111122333334344679999999999999999999999999999999999999999999999765443 34668
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCc---cccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGT---VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~p---l~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~ 237 (814)
..|+..|+++|+|+++++||++ +| ||++|||+++|||+|+||+|+++|++++.+|+++|.|++....+|..+.
T Consensus 210 ~~da~~r~~~t~e~v~~s~~i~----~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~ 285 (386)
T TIGR01930 210 STDEGIRPNTTLEKLAKLKPAF----DPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMG 285 (386)
T ss_pred CCCCCCCCCCCHHHHhCCCCCc----CCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCcccc
Confidence 8999999999999999999999 77 9999999999999999999999999999999899999999877777677
Q ss_pred CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 238 ~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
.++..+++++|+++|++++|||++|+||+|++.+++++|+|||...|+|++||++++|||+|++|+++++|+++|||+
T Consensus 286 ~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~ 365 (386)
T TIGR01930 286 LGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRG 365 (386)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCeeehcchhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcC
Confidence 778899999999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEe
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALIS 352 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~ 352 (814)
+++|++++ |++||+|.++|||
T Consensus 366 ~~~gl~~~----------------~~~gG~g~~~~~e 386 (386)
T TIGR01930 366 GRYGLATI----------------CIGGGQGIAVILE 386 (386)
T ss_pred CCEEEEEE----------------eccCCceEEEEeC
Confidence 67899997 9999999999996
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-54 Score=480.18 Aligned_cols=333 Identities=48% Similarity=0.769 Sum_probs=287.7
Q ss_pred ccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCc-ccCC
Q psy12877 3 NVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGE-TKYG 81 (814)
Q Consensus 3 ~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~-~~~~ 81 (814)
++.+...+++++++++..+|++.++|+++|+.+|+|++.+|..|+++|++|.+|+|||+|+|+||+.+....... ....
T Consensus 51 ~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~ 130 (386)
T cd00751 51 NVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRL 130 (386)
T ss_pred eccCCCCCChHHHHHHHHcCCCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCccccccccccccc
Confidence 333434467889999999999755899999999999999999999999999999999999999998774322110 0110
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeec
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~ 161 (814)
..........+++..+.....|++.+++||++||+||||+++|++++|+||..|++.+.+.++|+|+..+.+| ++.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~-~~~~~~ 209 (386)
T cd00751 131 GLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRK-GPVVVD 209 (386)
T ss_pred CccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCC-CCeEeC
Confidence 0000011112333333345569999999999999999999999999999999999999999999999976543 346789
Q ss_pred cCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHH
Q psy12877 162 NEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 241 (814)
Q Consensus 162 ~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~ 241 (814)
+|+..|+++|+|+++++||++++ .+|||.+|||+++|||+|+||+|+++|++++.+|+++|+|++...+++.....++.
T Consensus 210 ~~a~~r~~~t~e~v~~s~~i~~p-~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~ 288 (386)
T cd00751 210 RDEGPRPDTTLEKLAKLKPAFKK-DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPV 288 (386)
T ss_pred CCCCCCCCCCHHHHhCCCCCcCC-CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHH
Confidence 99999999999999999999933 25699999999999999999999999999999998999999998888877778888
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCC
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKG 319 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~g 319 (814)
.+++++|+++||+++|||++|+||+|++++++++|.||+|+.|+|++||+++.|||+|++|+++++|+++|||+ +++|
T Consensus 289 ~a~~~a~~~Agi~~~did~~e~~d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~~~g 368 (386)
T cd00751 289 PAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYG 368 (386)
T ss_pred HHHHHHHHHcCCCHHHcCEEEeechhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 7889
Q ss_pred CccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 320 QLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 320 l~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++++ |+|||+|++++||.
T Consensus 369 l~~~----------------~~~gg~g~~~~ie~ 386 (386)
T cd00751 369 LATM----------------CIGGGQGAAMVIER 386 (386)
T ss_pred EEEE----------------cccccceEEEEEEC
Confidence 9998 99999999999983
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-54 Score=478.03 Aligned_cols=314 Identities=33% Similarity=0.524 Sum_probs=268.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc-cCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~-~~~~~~~~~~~~~~ 88 (814)
+++++|.+.+.+|++..+|.++++++|+||+.++.+|+++|++|++|+|||+|+|+||+.|+... +...+.+.......
T Consensus 63 ~~~~~~~~~l~~gl~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~ 142 (382)
T PRK07801 63 AGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAE 142 (382)
T ss_pred cccHHHHHHHHcCCCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCccccc
Confidence 37799999999999877999999999999999999999999999999999999999998774211 11101110000000
Q ss_pred ccccCccccc--ccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcc
Q psy12877 89 IVYDGLSDVY--NKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE 166 (814)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~ 166 (814)
...+..++ ....|+..+++||++||+|||++++|++++|+||..||++|+|.++++|+.. +..|+.+
T Consensus 143 --~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~---------~~~d~~~ 211 (382)
T PRK07801 143 --SKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG---------VTVDEGP 211 (382)
T ss_pred --CcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC---------ccccCCc
Confidence 01111111 1234555699999999999999999999999999999999999888888863 4678899
Q ss_pred ccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHHHHHHH
Q psy12877 167 YKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPT 246 (814)
Q Consensus 167 r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~ 246 (814)
| ++|+|+++++||+++ .+|+|++|||+++|||+|+||+|+|+|++++.+|.++|.+++....++..+..++..++++
T Consensus 212 ~-~~t~e~~~~~~~i~~--~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~ 288 (382)
T PRK07801 212 R-ETSLEKMAGLKPLVE--GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRY 288 (382)
T ss_pred C-cCCHHHHhcCCCCCC--CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHH
Confidence 8 799999999999992 2699999999999999999999999999999988889999988776665566778899999
Q ss_pred HHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCcccc
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQF 324 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~ 324 (814)
+|+++|++++|||++|+||+|++++++++|+||||++|||++||++++|||+|+||+++++|+++||++ +++|+++.
T Consensus 289 a~~~agi~~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~- 367 (382)
T PRK07801 289 ALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTM- 367 (382)
T ss_pred HHHHcCCCHHHcCEeeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEE-
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 67888887
Q ss_pred ccCccccccccceeEEecCCcceeEEEec
Q psy12877 325 WYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 325 ~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|+|||++.+++||.
T Consensus 368 ---------------~gggg~~~~~vl~~ 381 (382)
T PRK07801 368 ---------------CEGGGTANVTIIER 381 (382)
T ss_pred ---------------cccccceeEEEEEe
Confidence 99999999999974
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-53 Score=473.50 Aligned_cols=328 Identities=33% Similarity=0.476 Sum_probs=279.5
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++|+++..+|++ .+|.++|+++|+||+.++..|+++|++|.+|+|||+|+|+||..+..........
T Consensus 56 g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~ 134 (406)
T PRK07851 56 GCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDT 134 (406)
T ss_pred EcccccccccCCHHHHHHHHcCCC-CCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCccccccccccc
Confidence 44443332 578899999999996 6999999999999999999999999999999999999999988763111100000
Q ss_pred CCCcc-------------cccccccCcc---cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q psy12877 81 GGMNL-------------IDGIVYDGLS---DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQ 144 (814)
Q Consensus 81 ~~~~~-------------~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~e 144 (814)
+.... .+......+. .+.....|++.+++|+++||++||+|++|++.+|++|..+.+++++..+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~ 214 (406)
T PRK07851 135 KNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFERE 214 (406)
T ss_pred CchhhhhcccccccccccccccccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccc
Confidence 00000 0000001110 1111346799999999999999999999999999999999999999999
Q ss_pred eeeeeecCCCCCceeeccCCccccCCCHHhhhcCCceeccCCCc---cccCCCCCcCceeeEEEEcCHHHHHHcCCCccE
Q psy12877 145 IVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT---VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA 221 (814)
Q Consensus 145 i~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~p---l~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a 221 (814)
++|+.+++. ..+++|+++|+++|+|+++++||++ +| +|++|||+++|||+|+||+|+|+|++++.+|++
T Consensus 215 ~~p~~~p~~----~~~~~d~~~r~~~t~e~v~~s~~v~----~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a 286 (406)
T PRK07851 215 ITPVTLPDG----TVVSTDDGPRAGTTYEKVSQLKPVF----RPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLA 286 (406)
T ss_pred eeeeecCCC----ceeCCCCCccCCcCHHHHhcCCCcc----CCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccE
Confidence 999987642 3578899999999999999999999 66 999999999999999999999999999999999
Q ss_pred EEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCCh
Q psy12877 222 RIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMS 301 (814)
Q Consensus 222 ~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gas 301 (814)
||+|++.....|..+..++..+++++|+++||+++|||++|+||+|++++++++|+||||++|+|++||++++|||+|+|
T Consensus 287 ~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gas 366 (406)
T PRK07851 287 RIVSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMT 366 (406)
T ss_pred EEEEEEEccCCCCccchhHHHHHHHHHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHH
Confidence 99999998777766667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 302 GARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 302 G~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
|+++++++++|||+ +++||+++ |+|||+|.+++||..
T Consensus 367 g~~~~~~~~~qL~~~~~~~g~~~~----------------~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 367 GARITTTLLNNLQTHDKTFGLETM----------------CVGGGQGMAMVLERL 405 (406)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEE----------------ccccChhhEEEEEec
Confidence 99999999999987 67899998 999999999999853
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-52 Score=461.51 Aligned_cols=310 Identities=37% Similarity=0.602 Sum_probs=271.1
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~d-AGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
++|+|+|++||||+++.|.++++++.+|+.++++++|++ +||++++||.+++|++.+.+. +.+++|.+++.+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~v 81 (400)
T PRK13359 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGV 81 (400)
T ss_pred CcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 579999999999999999999999999999999999995 699999999999999886654 578999999999999889
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCC-Ccccccc-----ccccccccccccc
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG-GMNLIDG-----IVYDGLSDVYNKI 529 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~ 529 (814)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+........++ .....+. ...+.+.+.+...
T Consensus 82 p~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
T PRK13359 82 PGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVD 161 (400)
T ss_pred ceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccC
Confidence 999999999999999999999999999999999999999999863221111111 1011110 1113344555678
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
+||++||++|++||||||+||+|+++||+|+..+||+++|++||+|+++++.++.. ++++.|+.+|++|+|+|+++||+
T Consensus 162 ~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~De~~r~~t~e~l~~l~p~ 240 (400)
T PRK13359 162 SMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLKGV 240 (400)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCc-eeecCCCCCCCCCHHHHhcCCCc
Confidence 99999999999999999999999999999988889999999999999887654432 56899999999999999999999
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEe
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYD 688 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~ 688 (814)
|++ .++||++|||+++|||+++||+|+++|++++.+|++||+|++..+.+|..++.++..|++++|+++|+ .+|++|.
T Consensus 241 f~~-~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~i 319 (400)
T PRK13359 241 VRP-DGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDVI 319 (400)
T ss_pred cCC-CCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHHHcCcC
Confidence 975 68999999999999999999999999999999999999999998888888889999999999999999 4799998
Q ss_pred h
Q psy12877 689 E 689 (814)
Q Consensus 689 e 689 (814)
|
T Consensus 320 e 320 (400)
T PRK13359 320 E 320 (400)
T ss_pred c
Confidence 7
|
|
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-52 Score=421.79 Aligned_cols=328 Identities=34% Similarity=0.481 Sum_probs=287.1
Q ss_pred CCCCceeEeceeeccccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCC
Q psy12877 375 SKPGDVFIVSGSRTPMGS-FRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPK 453 (814)
Q Consensus 375 ~~~~~V~IvG~~rTp~~~-~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~ 453 (814)
...++|+||++.|||+++ ++|.|++..+++|+..++++.+++.+++|+.|..+++|+++..+.+...+|+.++++|+|.
T Consensus 33 ~~~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~ 112 (435)
T KOG1389|consen 33 ASAEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPE 112 (435)
T ss_pred ccccCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCc
Confidence 445799999999999997 5799999999999999999999999999999999999999999888788999999999999
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccC-ccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV-PFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
++|..++|++|+||++|+...+..|++|.+|+.|++|+|||+.. |.. ..+...+. ...--.+..+..+||
T Consensus 113 tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g------~~g~~~~~---~~~~~~A~dCllpmG 183 (435)
T KOG1389|consen 113 TVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRG------WPGSINPR---LQKFEKARDCLLPMG 183 (435)
T ss_pred ccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCC------CccccChh---hhhhhHHhhcccccc
Confidence 99999999999999999999999999999999999999999875 210 11111111 111111234567899
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccce--eccCCCC-CcceEeccCCccc-cCCHHHhhcccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPV--SIPQRKG-KADIIVNEDEEYK-KINFEKFKSLAT 608 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~--t~~~~~~-s~~i~~~~D~~~~-~~~~e~l~~~~p 608 (814)
.+.|+++++||+||+++|++|+.||++|+++...|.|.+||+|+ ++-|-.+ .+.|+++.||++| .+|++.|.+|||
T Consensus 184 itsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkp 263 (435)
T KOG1389|consen 184 ITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKP 263 (435)
T ss_pred cchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcch
Confidence 99999999999999999999999999999999999999999999 4444333 4578899999999 699999999999
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCCC------
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQL------ 682 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~~------ 682 (814)
+|.+ +|+.|.+|+|++||||+||+|+.+..|.++|++.+++...|...+.+|.+||.||+.|++++++.+|+.
T Consensus 264 vFkk-dGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~ 342 (435)
T KOG1389|consen 264 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDL 342 (435)
T ss_pred hhhc-CCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCchhhhHHHHHHcCCcccccce
Confidence 9998 799999999999999999999999999999999999999999999999999999999999999999982
Q ss_pred --------cceeEehhhhhhchHHHHhccCCCCeEEEEecCc
Q psy12877 683 --------SQFWYDENTTQRLSEEAVCRAGKEGSIALISCPT 716 (814)
Q Consensus 683 --------sq~~y~e~t~~~l~~~~~~~~~~~g~iA~~s~ps 716 (814)
||+.||.+.++ |+.+++| +.||+||+ ..|.
T Consensus 343 FEINEAFAsQ~~yc~~KL~-ld~ekVN--~~GGaiAl-GHPl 380 (435)
T KOG1389|consen 343 FEINEAFASQALYCRNKLG-LDPEKVN--VNGGAIAL-GHPL 380 (435)
T ss_pred eehhHHHHHHHHHHHHHhC-CCHHHcC--CCCceeec-cCCc
Confidence 66666666666 7788888 78888875 4554
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-51 Score=451.59 Aligned_cols=306 Identities=26% Similarity=0.388 Sum_probs=268.0
Q ss_pred CceeEeceeecccc--c-CCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCC
Q psy12877 378 GDVFIVSGSRTPMG--S-FRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 378 ~~V~IvG~~rTp~~--~-~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~ 453 (814)
++||||++.||||+ + +.|.|+++++.+|+..+++++|+++|+++++||.|++|++.+.+. +++++|+.++.+|||.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 57999999999999 8 589999999999999999999999999999999999999988766 6899999999999999
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCC-CccccccccccccccccccccHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG-GMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
++|++||++.|+||++||..|+++|++|++|++|+||+|+||+.|+...... +.+ .....+. ..+.+.+.+....||
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~Mg 159 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDM-AAGKPPLGMGS-GNLRLRALHPQSHQG 159 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccc-cCCCCcccccc-cCcccccccCCCCHH
Confidence 9999999999999999999999999999999999999999999997322000 111 0001110 012333434456899
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~ 611 (814)
++||+++++||||||+||+||++||++|.+++.+++|++||+|++ +..+. +++++||.+| ++|+|+|.+|||+|.
T Consensus 160 ~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~--~~~~~--~~~~~De~~R~~~t~e~la~L~p~F~ 235 (417)
T PRK06025 160 VCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY--RDDGS--VALDHEEFPRPQTTAEGLAALKPAFT 235 (417)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEE--cCCCC--EEecCCCCCCCCCCHHHHcCCCCCcc
Confidence 999999999999999999999999999999999999999999998 22332 5689999999 699999999999996
Q ss_pred c-------CCCc------------------cccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCc
Q psy12877 612 K-------ENGT------------------VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 666 (814)
Q Consensus 612 ~-------~~~p------------------lt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~ 666 (814)
+ +.++ +|++|||+++|||+|+||+|+++|++++++|+++|+|++.++++|..++.
T Consensus 236 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~~~ 315 (417)
T PRK06025 236 AIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLMLN 315 (417)
T ss_pred ccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcc
Confidence 3 2566 89999999999999999999999999999999999999999999998888
Q ss_pred hHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 667 APAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 667 g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|..|++++|+++++ .+|++++|
T Consensus 316 ~p~~Ai~~aL~~AGl~~~DID~~e 339 (417)
T PRK06025 316 APVPAAKKVLAKAGLTKDDIDLWE 339 (417)
T ss_pred cHHHHHHHHHHHcCCCHHHCcEEE
Confidence 999999999999999 57999987
|
|
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-52 Score=411.84 Aligned_cols=333 Identities=37% Similarity=0.578 Sum_probs=303.0
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
.+.|+||++.||+||.+.|.+++++..||..-|++.||+.+++.++.||.|++|++..++. +.+++|.+.+..|+|...
T Consensus 3 ~kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 3 GKGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred cceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 3569999999999999999999999999999999999999999999999999999987655 678999999999999999
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
|+.++|+.|+||.++|..+++.|.-|++++||++|+|.||+.|+..+ |..+..+..+...+.+|.++.+.+.+.+|++
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 99999999999999999999999999999999999999999998655 5566677777777888999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
+||+++.+|.||||+.|+|+.+|+++|.+++..++|.+||.|++++.+.+.. .+.-||.+| .+|+|+|+||||+|.|
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~--~f~vDEHpRp~TT~E~L~KLppvFkK 240 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQ--TFQVDEHPRPQTTLEQLQKLPPVFKK 240 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCce--eeEecCCCCccchHHHHhhCCchhcc
Confidence 9999999999999999999999999999999999999999999999888764 556799999 6999999999999998
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEe---
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYD--- 688 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~--- 688 (814)
++.+|++|.|.++|||+|+|++|||..++++++|+++|++|...+++|.+|++||+.|++.+|+..|+ +.++|..
T Consensus 241 -dG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvN 319 (396)
T KOG1391|consen 241 -DGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVN 319 (396)
T ss_pred -CCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceEEec
Confidence 89999999999999999999999999999999999999999999999999999999999999999998 4555554
Q ss_pred ----------hhhhhhchHHHHhccCCCCeEEEEecCc
Q psy12877 689 ----------ENTTQRLSEEAVCRAGKEGSIALISCPT 716 (814)
Q Consensus 689 ----------e~t~~~l~~~~~~~~~~~g~iA~~s~ps 716 (814)
++.++ |+-+++| .+||+||+ ..|.
T Consensus 320 EAFApQ~LAv~r~L~-ld~sKlN--VNGGAIAL-GHPL 353 (396)
T KOG1391|consen 320 EAFAPQYLAVERSLD-LDISKLN--VNGGAIAL-GHPL 353 (396)
T ss_pred hhhchHHHHHHHhhC-CChhhcc--ccCceeec-cCcc
Confidence 33343 5555666 67888885 4443
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=451.85 Aligned_cols=311 Identities=33% Similarity=0.532 Sum_probs=270.1
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
|++|||||++||||+++.|.++++++.+|+.+|+++||+|+||++++||.+++|++.+... +.++++.+++.+|+|..+
T Consensus 1 ~~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 1 MLDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 3579999999999999889999999999999999999999999999999999999876554 578899999999998789
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCC-Cccccccc-----cccccccccccc
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG-GMNLIDGI-----VYDGLSDVYNKI 529 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~ 529 (814)
|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|.........++ .....+.. ....+.+.+...
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGND 160 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccC
Confidence 999999999999999999999999999999999999999988752211100000 00000100 112223335577
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p 608 (814)
+||++|++||++||+|||++|+||++||+|+..++++++|+++++|+++++++.++.+.+++|+.+| ++|+|+|.++||
T Consensus 161 ~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p 240 (401)
T PRK08131 161 SMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKP 240 (401)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCC
Confidence 8999999999999999999999999999999999999999999999999876655555689999999 599999999999
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeE
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWY 687 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y 687 (814)
+|. .+|||++|||+++|||+|+||+|+++|++++.+|++||+|++..+++|..++.++..|++++|+++|+ .+|+++
T Consensus 241 ~f~--~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~ 318 (401)
T PRK08131 241 LFE--GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMDI 318 (401)
T ss_pred CCC--CCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCCe
Confidence 994 69999999999999999999999999999999999999999999988888888999999999999999 589999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.|
T Consensus 319 ~e 320 (401)
T PRK08131 319 IE 320 (401)
T ss_pred eh
Confidence 97
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-50 Score=447.41 Aligned_cols=310 Identities=41% Similarity=0.650 Sum_probs=268.2
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||++||||+++.|.+++.++.+|+.+|+++||+|+||++++||.+++|+..+...++++++.++..+|++..+|+
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~ 81 (393)
T PRK05656 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPA 81 (393)
T ss_pred CcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcce
Confidence 57999999999999988889999999999999999999999999999999999987554566788999999999865899
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC--CccCCCCccccccccccccccccccccHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR--GETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
++|+++|+||+.+|..|+++|++|.+|++|++|+|+||+.|+.... ....++..........+.++..+....|++.|
T Consensus 82 ~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05656 82 MTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITA 161 (393)
T ss_pred EEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHH
Confidence 9999999999999999999999999999999999999998853211 01111110000000112222222235799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
++||++||+|||++|+|+++||+||..+||+|+|++||+|++++++++++ +.+++|+.+| ++++|+|.+|||+|.+ .
T Consensus 162 ~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~-~~~~~D~~~r~~~~~e~l~~l~p~~~~-~ 239 (393)
T PRK05656 162 ENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEP-LAFATDEQPRAGTTAESLAKLKPAFKK-D 239 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCc-eEeccCCCCCCCCCHHHHhcCCCCcCC-C
Confidence 99999999999999999999999999988999999999999999887665 4489999999 6999999999999974 6
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+++|++|||+++|||+++||+|+|+|++++.+|++||+|++..+.+|..++.++..|++++|+++|+ .+|++|.|
T Consensus 240 g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~e 315 (393)
T PRK05656 240 GSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIE 315 (393)
T ss_pred CCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEEE
Confidence 8999999999999999999999999999999999999999999988988888999999999999999 58999987
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-50 Score=446.86 Aligned_cols=308 Identities=40% Similarity=0.623 Sum_probs=264.5
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|||||+.||||+++.|.++++++.+|+.++++++|+|+||++++||.+++|++.+.+.+++.++.+++.+|++..+|+
T Consensus 3 ~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~ 82 (392)
T PRK06633 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPG 82 (392)
T ss_pred CCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccc
Confidence 57999999999999999999999999999999999999999999999999999998766677899999999999877999
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccc-cCCCccCCCCccccccccccccccccccccHHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY-LNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae 536 (814)
++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|.. ..+.....+.....+...++.+...+....|++.|+
T Consensus 83 ~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 162 (392)
T PRK06633 83 YTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAE 162 (392)
T ss_pred hhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHH
Confidence 9999999999999999999999999999999999999987631 111111111110111111122222233447999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCC-ccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 537 NTAKKFNISRDEQDEYALSSYKKSADAYKNNV-FSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 537 ~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~-~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
+||++||+|||++|+||++||+||.. ||++. |++||+|+++.+.+++ .++++|+.+| .+++|.|.+|+|+|.+ +
T Consensus 163 ~~~~~~gitre~~d~~Avksh~~a~~-np~A~~~~~ei~p~~v~~~~~~--~~~~~d~~~rp~~~~e~l~~l~p~~~~-~ 238 (392)
T PRK06633 163 NISKQFNISRQEQDEFALSSHKKAAK-AQLAGIFKDEILPIEVTIKKTT--SLFDHDETVRPDTSLEILSKLRPAFDK-N 238 (392)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHH-hHHcCCCcCceeeEEeccCCCc--eeeccCCCCCCCCCHHHHccCCCccCC-C
Confidence 99999999999999999999999999 88877 9999999987543333 4589999999 5789999999999975 6
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|||++|||+++|||+++||+|+|+|++++.+|++||+|++..+++|..++.++..|++++|+++|+ .+|+||.|
T Consensus 239 g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 239 GVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred CCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 9999999999999999999999999999999999999999999989988888899999999999999 58999998
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-51 Score=452.08 Aligned_cols=325 Identities=39% Similarity=0.555 Sum_probs=292.0
Q ss_pred CcccccCC-CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~-~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+ .++|++|++++.+|++..+|+++|+++|+||++|+..|+++|++|.+|+||++|+|+||+.|+. +...+
T Consensus 56 ~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~--~~~~~ 133 (392)
T COG0183 56 LGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG--REGVR 133 (392)
T ss_pred eccccccccccccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCcc--ccchh
Confidence 47888887 4789999999999999779999999999999999999999999999999999999999999874 11111
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
.... ..+.+..+.+.+.+....|+++|++||++||+|||+||+||++||+||.+||++++| +||+|+++.++ .
T Consensus 134 ~~~~-~~d~~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~-----~ 206 (392)
T COG0183 134 VLDS-AVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS-----P 206 (392)
T ss_pred hhhh-hhhhccccccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC-----c
Confidence 1111 233344455555555678999999999999999999999999999999999999999 99999998754 4
Q ss_pred eccCCccccC--CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC
Q psy12877 160 IVNEDEEYKK--INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237 (814)
Q Consensus 160 ~~~d~~~r~~--~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~ 237 (814)
+..|+.+|.+ .+.|.+.+++|.|++..+.++.+|.+.++||++++++++.+.+++++++|+++++++..++.+|..+
T Consensus 207 ~~~dp~~r~d~~~~~dg~a~l~~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~- 285 (392)
T COG0183 207 VVADPLRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM- 285 (392)
T ss_pred eecCCcccCCCCCChhhhcCceeccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-
Confidence 7889999999 9999999999999654368999999999999999999999999999999999999999999999888
Q ss_pred CcHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc-
Q psy12877 238 IAPAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS- 315 (814)
Q Consensus 238 ~~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~- 315 (814)
..|+.++.++|+++++. .+|||++|++|+|+.+.+.+.+.+|. .|||++||++++|||+|+||++++.++++||++
T Consensus 286 ~~~v~av~~~~~~~~l~~~edlgl~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~ 363 (392)
T COG0183 286 DGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGR 363 (392)
T ss_pred cCCHHHHHHHHHHcCCchhhhcCceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhc
Confidence 89999999999999999 99999999999999999999999999 899999999999999999999999999999997
Q ss_pred -C----CCCCccccccCccccccccceeEEecCC-cceeEEEec
Q psy12877 316 -G----QKGQLSQFWYDENTTQRLSEEVVCRAGK-EGSIALISC 353 (814)
Q Consensus 316 -g----~~gl~~~~~~~~~~~~~~~~~~~~~ggG-~g~a~ll~~ 353 (814)
. ++|++++ |.||| +|.+++||.
T Consensus 364 ~~~~~~~~g~~t~----------------~~Ggg~~g~a~vl~~ 391 (392)
T COG0183 364 GQVVAKRRGLATL----------------CIGGGGQGVAAVLER 391 (392)
T ss_pred cccccccceeeEE----------------EecCcceeEEEEEec
Confidence 3 5777776 99999 999999974
|
|
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=411.47 Aligned_cols=333 Identities=35% Similarity=0.551 Sum_probs=292.2
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcc--
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGET-- 78 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~-- 78 (814)
+|.|+|.-...|+||+.++.+|+++.+|+.||..+|-|+.+|+..+..+|++|.+|++++||+|-||++|.+.+|...
T Consensus 93 ~gtviqevktsniareaal~agfsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrkl 172 (465)
T KOG1392|consen 93 CGTVIQEVKTSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKL 172 (465)
T ss_pred ehhhHHHHhcchHHHHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHH
Confidence 588888777899999999999999999999999999999999999999999999999999999999999987654311
Q ss_pred --------cCCC-----Cccccccccc---CcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q psy12877 79 --------KYGG-----MNLIDGIVYD---GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFS 142 (814)
Q Consensus 79 --------~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~ 142 (814)
..+. ..+..++... ...+..++..||..++|++..|+++|.+||+||.+||..|..++++|+|.
T Consensus 173 ml~~nkak~~gqrl~l~s~fr~nflapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ft 252 (465)
T KOG1392|consen 173 MLGMNKAKDVGQRLKLGSQFRKNFLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFT 252 (465)
T ss_pred hhccccccchhhhhhHHhhhhhhccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCccc
Confidence 0110 0111111111 12344566789999999999999999999999999999999999999997
Q ss_pred CCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEE
Q psy12877 143 SQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLAR 222 (814)
Q Consensus 143 ~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~ 222 (814)
+ ++|+.+.+++. ....|..+| .+|+|++.+++|.|-|+.|++|+.|.+.++|||.|+++|+||+|...|.+|-|+
T Consensus 253 d-vvpfkv~gkd~---~t~kdngir-vssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkay 327 (465)
T KOG1392|consen 253 D-VVPFKVDGKDP---KTIKDNGIR-VSSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAY 327 (465)
T ss_pred c-eeeEecCCCCc---ceecCCCcc-cCCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHH
Confidence 6 78999976652 345788887 479999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCC-CCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcC---CCC--------------CC
Q psy12877 223 IIAYFDAATEPID-FPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLD---IDP--------------SK 284 (814)
Q Consensus 223 I~g~~~~~~~p~~-~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg---~~~--------------~~ 284 (814)
++.+-..+.||.+ ..++|.++++++|+++||+.+|||.||+||+|+.|.+..++++. ||. ++
T Consensus 328 lrdflyvsqdpkdqlllgpay~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k 407 (465)
T KOG1392|consen 328 LRDFLYVSQDPKDQLLLGPAYVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDK 407 (465)
T ss_pred hhhheeeccCchhheecccccccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHH
Confidence 9999999989854 56899999999999999999999999999999999999998875 221 27
Q ss_pred cccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 285 VNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 285 vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+|.|||++++|||+|+||.|...+..+.|++ |++|++.. |+.||+|.+|+||..
T Consensus 408 ~nnwggslsighpfgatgvrl~mh~anrl~~e~gqygvvaa----------------caaggqgvamlieay 463 (465)
T KOG1392|consen 408 LNNWGGSLSIGHPFGATGVRLAMHSANRLKEEKGQYGVVAA----------------CAAGGQGVAMLIEAY 463 (465)
T ss_pred hcccCcceecCCcccccchhhHHHHHhHHHhhcCceeEeeh----------------hhcCCcceEEEeecc
Confidence 9999999999999999999999999999999 99999998 999999999999864
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=441.37 Aligned_cols=310 Identities=38% Similarity=0.593 Sum_probs=268.4
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQ-KANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~-dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
++|+|||++||||+++.|.++++++.+|+.++++++|+ ++||++++||.+++|++.+.+. +.++++.+++.+|++.++
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v 81 (401)
T PRK09050 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV 81 (401)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC
Confidence 57999999999999988899999999999999999999 5899999999999999876555 478999999999998789
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCC-Ccccccc-----ccccccccccccc
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG-GMNLIDG-----IVYDGLSDVYNKI 529 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~ 529 (814)
|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+........++ .....+. ...+.+.+.+...
T Consensus 82 P~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (401)
T PRK09050 82 PGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVD 161 (401)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccc
Confidence 999999999999999999999999999999999999999998852211001111 0000000 0112233445578
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p 608 (814)
+||++||+|+++||+|||+||+||..||+|+.++..+++|++||+|+++.+.++.. +++++|+.+| ++|+|+|.++||
T Consensus 162 ~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~-~~~~~da~~r~~~t~e~l~~l~~ 240 (401)
T PRK09050 162 SMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAKLKP 240 (401)
T ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999987654433 5689999998 699999999999
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeE
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWY 687 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y 687 (814)
+|.+ .+|||++|||+++|||+|+||+|+++|++++.+|++||+|++..+++|..++.++..|++++|+++|+ .+|+|+
T Consensus 241 ~~~~-~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~ 319 (401)
T PRK09050 241 VFRP-DGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFDV 319 (401)
T ss_pred cccC-CCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCCc
Confidence 9975 58999999999999999999999999999999999999999998888888888999999999999999 579999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.|
T Consensus 320 ~e 321 (401)
T PRK09050 320 IE 321 (401)
T ss_pred cc
Confidence 87
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-49 Score=441.19 Aligned_cols=300 Identities=41% Similarity=0.656 Sum_probs=257.0
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||++||||+++.|.++++++.+|+.+|+++||+|+||++++||.+++|++.+.+.++++++.+++.+|++..+|.
T Consensus 2 ~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~ 81 (388)
T PRK06366 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTK 81 (388)
T ss_pred CcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcc
Confidence 57999999999999988889899999999999999999999999999999999987655556778999999999867899
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCC---ccCC---CCccccccccccccccccccccH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG---ETKY---GGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
++++++|+||+.++..|+++|++|++|+||++|+|+|++.|+..... .... ............++..+.....|
T Consensus 82 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~m 161 (388)
T PRK06366 82 YTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHM 161 (388)
T ss_pred eeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccH
Confidence 99999999999999999999999999999999999999877532111 0000 00000001111222223334569
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhc-CCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKN-NVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~-a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
++.|++||++||+|||+||+|+++||+||.+ ||. |+|++||+|+. .+++|+++|++|+|++.++||+|
T Consensus 162 al~A~~~~~~yGitrE~~a~vAv~s~~~A~~-np~ag~~~~ei~p~~----------~~~~d~~~r~~t~e~~~~s~~v~ 230 (388)
T PRK06366 162 GVSAERTARKYGITREMADEYSVQSYERAIR-ATESGEFRNEIVPFN----------DLDRDEGIRKTTMEDLAKLPPAF 230 (388)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh-hHhcCCccccccccc----------ccccccCcccCCHHHHhhCCCcc
Confidence 9999999999999999999999999999999 877 59999999875 16789999999999999999999
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+ .+|||++|||+++|||+|+||+|+|+|++++.+|++||+|++..+.+|.++..+++.|++++|+++++ ++|+|+.|
T Consensus 231 ~p-~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DiDv~E 309 (388)
T PRK06366 231 DK-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDYYDLVE 309 (388)
T ss_pred CC-CCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHHcceee
Confidence 64 57899999999999999999999999999999999999999999888888888899999999999999 58899887
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-49 Score=435.68 Aligned_cols=303 Identities=28% Similarity=0.439 Sum_probs=261.4
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCcc
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~~ 456 (814)
++|||||++||||+++.|.++++++.||+.+|++++|+|+||++++||.+++|++.+... +.+++|...+..||+..+|
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP 81 (390)
T PRK06504 2 AEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP 81 (390)
T ss_pred CceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc
Confidence 579999999999999989999999999999999999999999999999999999875433 4689999999999988899
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC---CccCCCCcccccccccccccccc--ccccH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR---GETKYGGMNLIDGIVYDGLSDVY--NKIHM 531 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~m 531 (814)
+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.... .....+.. ..+.+...+ ...+|
T Consensus 82 ~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 82 GTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHY------KSPGMEERYPGIQFSQ 155 (390)
T ss_pred eEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccc------cccccccccCCCCCCH
Confidence 99999999999999999999999999999999999999988752211 01111110 001122211 13478
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVF 610 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f 610 (814)
+..++++|++||+|||+||+||++||+||.++...++|++||+|+++.+..+.| ..+++||.+| .+|+|+|.++||++
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~-~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCc-eEEccCCCCCCCCCHHHHhcCCCCC
Confidence 889999999999999999999999999999966678899999999887655444 5688999998 69999999999996
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
. .+|+|++|||+++|||+|+||+|+|+|++++++|++||++++..+.+|..+..++..|++++|+++|+ ..|+++.|
T Consensus 235 ~--~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~E 312 (390)
T PRK06504 235 E--GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYE 312 (390)
T ss_pred C--CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3 58999999999999999999999999999999998899999988888878888999999999999999 57888875
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-48 Score=436.14 Aligned_cols=310 Identities=38% Similarity=0.600 Sum_probs=266.6
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQ-KANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~-dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
++|+|||++||||+++.|.++++++.+|+.++++++|+ ++||++++||.+++|++.+.+. +.++++.+++.+|++.++
T Consensus 1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 36999999999999988899999999999999999999 5899999999999999876554 578999999999998779
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCC-cccccc-----ccccccccccccc
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGG-MNLIDG-----IVYDGLSDVYNKI 529 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~ 529 (814)
|+++|+++|+||+.||..|+++|++|++|++|++|+|+||+.|+........++. ....+. ...+.+.+.+...
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVD 160 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccC
Confidence 9999999999999999999999999999999999999999888521110101110 000000 0112333445678
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p 608 (814)
+||++|++||++||+|||+||+||++||+||.+++.+++|++||+|+.+++..+.. ..+++|+.+| ++++|++.++||
T Consensus 161 ~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~-~~~n~da~~r~~~t~e~l~~~~~ 239 (400)
T TIGR02430 161 SMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGLAKLKP 239 (400)
T ss_pred cHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCc-eeeCCCCccCCCCCHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999988754321 3578899998 799999999999
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeE
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWY 687 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y 687 (814)
+|.+ .+|||++|||+++|||+++||+|+|+|++++.+|++||+|++..+.+|..++.++..|++++|+++|+ .+||||
T Consensus 240 v~~p-~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DID~ 318 (400)
T TIGR02430 240 VVRP-DGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQFDV 318 (400)
T ss_pred cccC-CCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHHCCC
Confidence 9974 58999999999999999999999999999999988999999988878887888899999999999999 589999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.|
T Consensus 319 ~e 320 (400)
T TIGR02430 319 IE 320 (400)
T ss_pred cc
Confidence 87
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-48 Score=434.38 Aligned_cols=298 Identities=31% Similarity=0.476 Sum_probs=261.8
Q ss_pred CCceeEeceeeccccc--CCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCC
Q psy12877 377 PGDVFIVSGSRTPMGS--FRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~--~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~ 453 (814)
|++||||++.||||++ +.|.++++++.+|+.+|++++|+++||++++||.+++|++.+... +.+.++.+++.+|++.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 3579999999999998 579999999999999999999999999999999999999987554 5678999999999987
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccc-ccccccHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSD-VYNKIHMG 532 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~mg 532 (814)
.+|+++|+++|+||++||..|+++|++|.+|++|++|+|+||+.|+.... ..+ ..+.+.. ......||
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~--~~~---------~~~~~~~~~~~~~~mg 149 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDG--GAW---------AMDPSTNFPTYFVPQG 149 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccC--ccc---------ccCcccccccccCCHH
Confidence 79999999999999999999999999999999999999999998852210 000 0011111 12235799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~ 611 (814)
++||+||++||+|||+||+||++||+||.+++.+|+|++||+|++ +..+. +++++|+.+| ++|+|+|+++||+|.
T Consensus 150 ~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~--~~~~~--~~~~~de~~r~~~t~e~l~~l~p~f~ 225 (402)
T PRK08242 150 ISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVK--DQNGL--TILDHDEHMRPGTTMESLAKLKPSFA 225 (402)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeee--cCCCC--EeeCCCCCCCCCCCHHHHhCCCCCcc
Confidence 999999999999999999999999999999999999999999997 33333 4589999998 699999999999997
Q ss_pred cC---CC-----------------ccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhH
Q psy12877 612 KE---NG-----------------TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 671 (814)
Q Consensus 612 ~~---~~-----------------plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A 671 (814)
+. .+ ++|++|||+++|||+|+||+|+|+|+++|++|++||+|++..+++|..++.+|..|
T Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a 305 (402)
T PRK08242 226 MMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPA 305 (402)
T ss_pred CccccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHH
Confidence 42 12 79999999999999999999999999999999999999999998898888999999
Q ss_pred HHHHHHhcCC-CcceeEeh
Q psy12877 672 IPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 672 ~~~~~~~~~~-~sq~~y~e 689 (814)
++++|+++|+ .+|+||.|
T Consensus 306 ~~~al~~AGl~~~DID~~e 324 (402)
T PRK08242 306 TRKALAKAGLTVDDIDLFE 324 (402)
T ss_pred HHHHHHHcCCCHHHCCEEE
Confidence 9999999999 68999998
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-49 Score=419.78 Aligned_cols=261 Identities=47% Similarity=0.720 Sum_probs=219.6
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++||||++.||||+++.|.+++.++.+|+.++++++|++++|++++||.+++|++.+...+++++|.+++.+|+|..+|
T Consensus 1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp 80 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP 80 (264)
T ss_dssp -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence 68999999999999999999999999999999999999999999999999999999987779999999999999998899
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+++|+++|+||++||+.|+++|++|.+|++|++|+|+||+.|+... +.....+.....+..+.+.+.++....+||++
T Consensus 81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg~t 160 (264)
T PF00108_consen 81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMGIT 160 (264)
T ss_dssp EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHHHH
T ss_pred eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999998653 33333443334444455667778888999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCcccc-CCHHHhhccccccccC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKE 613 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~-~~~e~l~~~~p~f~~~ 613 (814)
||+++++||||||++|+||++||+||.+++..|+|++||+|+++++.+|.+ .++++||++|+ +++|+|.+|||+|.+.
T Consensus 161 AE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~-~~~~~De~~r~~~~~e~l~~L~p~f~~~ 239 (264)
T PF00108_consen 161 AENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEE-VTVDRDEGIRPDTTLEKLAKLKPAFRKD 239 (264)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEE-EEE-S-STCGTT--HHHHHTS-BSSSTT
T ss_pred cccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccccce-eeeeccchhhcchhHHHHhccccccccc
Confidence 999999999999999999999999999999999999999999998777754 67899999996 9999999999999874
Q ss_pred CCccccCCCCccchhhhhhhhcCHH
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEE 638 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e 638 (814)
.|++|++|+|+++|||+++||+|+|
T Consensus 240 ~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 240 GGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp TSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccCCCccchhheEEEeecC
Confidence 4899999999999999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=436.06 Aligned_cols=310 Identities=41% Similarity=0.650 Sum_probs=266.8
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
.++|+|||++||||+++.|.++++++.+|+.+|+++||+|+||++++||.+++|++.+.+.+.++.+..++.+|+|..+|
T Consensus 6 ~~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p 85 (397)
T PRK06954 6 QDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVG 85 (397)
T ss_pred CCCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCcc
Confidence 46899999999999998889999999999999999999999999999999999998765556678888888899987799
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC--CccCCCCcccccccccccccccc-ccccHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR--GETKYGGMNLIDGIVYDGLSDVY-NKIHMGN 533 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~mg~ 533 (814)
+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|+.... .....+.....+....+.+...+ ....|++
T Consensus 86 ~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (397)
T PRK06954 86 CTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGT 165 (397)
T ss_pred EeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHH
Confidence 99999999999999999999999999999999999999987752111 11011100001111111111211 2457999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccC
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE 613 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~ 613 (814)
.|++||++||+|||++|+||++||+||.++||+++|++++.|++++++++++ .+++|+.||.++.|++.+++|+|.+
T Consensus 166 ~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~--~v~~D~~pr~~~~~~l~~l~~~f~~- 242 (397)
T PRK06954 166 FAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDT--VIDRDEQPFKANPEKIPTLKPAFSK- 242 (397)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCe--EeccCCCcCCCCHHHHhCCCCccCC-
Confidence 9999999999999999999999999999889999999999999999887774 5799999999999999999999985
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+|||++|||+++|||+|+||+|+++|++++.+|+++|+|++....+|.++..++..|++++|+++|+ ..|++|.|
T Consensus 243 ~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~e 319 (397)
T PRK06954 243 TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFE 319 (397)
T ss_pred CCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCEEe
Confidence 68999999999999999999999999999999999999999988778877888999999999999999 58999987
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-48 Score=431.76 Aligned_cols=310 Identities=40% Similarity=0.613 Sum_probs=265.8
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
|++|+|||++||||+++.|.+++.++.+|+.+|+++||+|+||++++||.+++|++.+... +.+.++.++..+|++..+
T Consensus 2 m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~ 81 (394)
T PRK09051 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET 81 (394)
T ss_pred CCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC
Confidence 4789999999999999888899999999999999999999999999999999999876543 356888888999998668
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
|+++|+++|+||+.|+..|+++|++|.+|+||++|+|+||+.|+... +.....+.....+.. ...+.+++....|++
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 160 (394)
T PRK09051 82 PAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMM-VGALHDPFGTIHMGV 160 (394)
T ss_pred ceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhh-cccccccccCCCHHH
Confidence 99999999999999999999999999999999999999998875211 111111110011110 111222222346999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
+|++||++||+|||++|+|+++||+||.+++.+++|++||+|++++++.++ +++++|+.+| ++|+|++.++||+|.+
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~--~~~~~da~~r~~~t~e~v~~~~~v~~~ 238 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFKK 238 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCC--eEECCCCCCCCCCCHHHHcCCCCcccC
Confidence 999999999999999999999999999998889999999999998876555 5689999998 6999999999999964
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
..+|||++|||+++|||+++||+|++.|++++.+|++||+|++..+.+|..++.++..|++++|+++|+ .+||+|.|
T Consensus 239 ~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~~e 316 (394)
T PRK09051 239 ENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVIE 316 (394)
T ss_pred CCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCEEE
Confidence 238999999999999999999999999999999999999999999988888888999999999999999 58999987
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-48 Score=428.85 Aligned_cols=302 Identities=31% Similarity=0.425 Sum_probs=260.4
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
|++|+|||++||||+++.|.++++++.+|+.++++++|+|+|+++++||.+++|++.+... +.+++|.+++.+|++..+
T Consensus 1 m~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 1 MGNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 3579999999999999888999999999999999999999999999999999999875544 467899999999998779
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.... ....+..... .++ .....|+.+|
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~-~~~~~~~~~~---~~~-----~~~~~m~~~a 151 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANA-GPGRGLPRPD---SWD-----IDMPNQFEAA 151 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccc-cccccCcccc---ccc-----cCcchHHHHH
Confidence 999999999999999999999999999999999999999998852211 1111100000 001 1124578899
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCC--CC---CcceEeccCCccccCCHHHhhcccccc
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR--KG---KADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~--~~---s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
++||++||+|||+||+|+++||+||.+++..++|++||+|+++++. ++ .....++.|+.+|.+|+|+|.+++|+|
T Consensus 152 e~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~ 231 (387)
T PRK07850 152 ERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL 231 (387)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCC
Confidence 9999999999999999999999999999999999999999987642 21 122368999999999999999999999
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
. .+++|++|||+++|||+|+||+|+|+|++++.+|.+||+|++..+.+|..+..++..|++++|+++|+ .+|+|+.|
T Consensus 232 ~--~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e 309 (387)
T PRK07850 232 E--GGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVE 309 (387)
T ss_pred C--CCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeee
Confidence 3 45679999999999999999999999999999998999999998888888888999999999999999 58999997
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-48 Score=430.06 Aligned_cols=310 Identities=46% Similarity=0.697 Sum_probs=264.7
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||++||||+++.|.+++.++.+|+.+|+++||+|+||++++||.+++|+..+.+.+.++++.++..+|++...|+
T Consensus 2 ~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 81 (393)
T PRK08235 2 SKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT 81 (393)
T ss_pred CcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce
Confidence 57999999999999988899999999999999999999999999999999999987654566788888999999867899
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
++|+++|+||+++|..|+++|++|.+|+||++|+|+|++.|+... +.....+.....+.+..+.+.+.+....|+++|
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 161 (393)
T PRK08235 82 ETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYG 161 (393)
T ss_pred eehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHH
Confidence 999999999999999999999999999999999999998875321 111111110001101112222223345799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
++||++||+|||++|+|+++||+||.+++..|+|++||+|+++.++++.. ++++.|+.+| ++|+|++.++||+|.+ .
T Consensus 162 ~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p-~ 239 (393)
T PRK08235 162 GEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAKLKPVFDK-T 239 (393)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCc-eEeCCCCCCCCCCCHHHHhcCCCcccC-C
Confidence 99999999999999999999999999988999999999999987655443 5688999998 6999999999999964 5
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|||++|||+++|||+|+||+|+|.|++++.+|+++|+|++..+.++..+..++..|++++|+++|+ .+|+|+.|
T Consensus 240 g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e 315 (393)
T PRK08235 240 GTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLFE 315 (393)
T ss_pred CcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCeeh
Confidence 7899999999999999999999999999999999999999987777777777888999999999999 57899987
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=427.84 Aligned_cols=306 Identities=33% Similarity=0.521 Sum_probs=259.3
Q ss_pred cCCCCceeEeceeeccccc-CCCCCCCCCHHHHHHHHHHHHHHHc-CCCCcCcceEEEEecccCCC-CChHHHHHHHHcC
Q psy12877 374 ASKPGDVFIVSGSRTPMGS-FRSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAG 450 (814)
Q Consensus 374 ~~~~~~V~IvG~~rTp~~~-~~g~~~~~~~~eLa~~A~~~AL~dA-Gl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~G 450 (814)
.+.|++|+|||++||||++ +.|.+++.+..+|+.+|+++||+|+ ||++++||.+++|++.+... +.+.++.+...+|
T Consensus 2 ~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~G 81 (399)
T PRK09052 2 SKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAG 81 (399)
T ss_pred CCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcC
Confidence 3556889999999999999 6889999999999999999999997 99999999999998876543 5678888888889
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
++..+|+++|+++|+||+.|+..|+++|++|.+|+||++|+|+||+.|+......... . .++..........
T Consensus 82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~-------~-~~~~~~~~~~~~~ 153 (399)
T PRK09052 82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSP-------A-IFARDENVGIAYG 153 (399)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCc-------c-hhccCCcccccch
Confidence 9855899999999999999999999999999999999999999998874111000000 0 0000000111247
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcC-CccccccceeccCC-----CCC---cceEeccCCccc-cCCH
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNN-VFSSQIVPVSIPQR-----KGK---ADIIVNEDEEYK-KINF 600 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a-~~~~ei~p~t~~~~-----~~s---~~i~~~~D~~~~-~~~~ 600 (814)
|+++|++||++||+|||++|+|+++||+||.+ ||++ +|+++|+|+++.+. .++ ....++.|+.+| ++++
T Consensus 154 ~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~-n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~ 232 (399)
T PRK09052 154 MGLTAEKVAEQWKVSREDQDAFALESHQKAIA-AQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSL 232 (399)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH-HHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCH
Confidence 99999999999999999999999999999999 8875 99999988865432 121 113578999998 6999
Q ss_pred HHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcC
Q psy12877 601 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGG 680 (814)
Q Consensus 601 e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~ 680 (814)
|+|.+|||+|.+ .+|||++|||+++|||+++||+|+|.|++++.+|++||+|++..+++|..++.++..|++++|+++|
T Consensus 233 e~l~~l~p~f~~-~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Ag 311 (399)
T PRK09052 233 EGLAKLKPVFAN-KGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAG 311 (399)
T ss_pred HHHhcCCCccCC-CCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcC
Confidence 999999999974 6999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred C-CcceeEeh
Q psy12877 681 Q-LSQFWYDE 689 (814)
Q Consensus 681 ~-~sq~~y~e 689 (814)
+ ++|+||.|
T Consensus 312 i~~~did~~e 321 (399)
T PRK09052 312 LKQDDLDWIE 321 (399)
T ss_pred CCHHHcCEEE
Confidence 9 58999987
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=428.60 Aligned_cols=312 Identities=33% Similarity=0.511 Sum_probs=264.7
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.|.+++.++.+|+.+|+++||+|+||++++||.+++|++.+...++++++.++..+|++..+|
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p 80 (404)
T PRK06205 1 MRDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP 80 (404)
T ss_pred CCceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc
Confidence 35799999999999999999999999999999999999999999999999999998877667788999999999986789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC--CccCCCCccccccccccccc---cc-ccccc
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR--GETKYGGMNLIDGIVYDGLS---DV-YNKIH 530 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~--~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ 530 (814)
.++|+++|+||+.+|..|+++|++|.+|+||++|+|+|++.+..... .....+.....+.+..+.+. .. .....
T Consensus 81 ~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (404)
T PRK06205 81 GMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGG 160 (404)
T ss_pred eeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCC
Confidence 99999999999999999999999999999999999999987642111 01111110000100001111 11 12346
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATV 609 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~ 609 (814)
|+.+|++||++||+|||+||+|+++||+||.+++..++|++||+|+++.+.++.+ ++++.|+.+| ++|+|++.++||+
T Consensus 161 m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v 239 (404)
T PRK06205 161 MIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESLAKLRPI 239 (404)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCc-eEeccCCCCCCCCCHHHHhcCCCc
Confidence 8888999999999999999999999999999888889999999999987755444 5688999998 6999999999999
Q ss_pred ccc--CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 610 FQK--ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 610 f~~--~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
|.+ +.+|||++|||+++|||+|+||+|+|+|++++.+|+++|+|++..+++|..++.++..|++++|+++|+ ..|+|
T Consensus 240 ~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did 319 (404)
T PRK06205 240 MGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDID 319 (404)
T ss_pred CccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCCHHHCC
Confidence 942 258999999999999999999999999999999999999999999888888888999999999999999 57999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
+.|
T Consensus 320 ~~e 322 (404)
T PRK06205 320 LIE 322 (404)
T ss_pred Eee
Confidence 987
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=429.32 Aligned_cols=290 Identities=20% Similarity=0.304 Sum_probs=235.6
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcccCCCC-ccccccccc
Q psy12877 16 QAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGM-NLIDGIVYD 92 (814)
Q Consensus 16 ~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~~~~~-~~~~~~~~~ 92 (814)
.++..+|+. .+|.++++.+|+||+.+|.+|+++|++|++|+|||+|+|++|..++... ......+.. ...+.+ .
T Consensus 61 ~~~~~lGl~-~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~ 137 (391)
T PRK08256 61 RALYEVGMT-GIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAEL--Q 137 (391)
T ss_pred HHHHHcCCC-CCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhh--c
Confidence 466788996 6899999999999999999999999999999999999999987553110 000001000 000000 1
Q ss_pred Ccc-cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 93 GLS-DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 93 ~~~-~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+. .......|++.+++||++||+|||++++|++++|+||.+||.+ ++ |+++|
T Consensus 138 ~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~-------------------------~~~~t 191 (391)
T PRK08256 138 GFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYA-QF-------------------------RDEYT 191 (391)
T ss_pred ccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hc-------------------------CCCCC
Confidence 111 1112236999999999999999999999999999999999865 33 34569
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC----------cHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI----------APA 241 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~----------~~~ 241 (814)
+|+|+++||++ +|||++|||+++|||+|+||+|+++|++++++|.++|.|++...+++..+.. ++.
T Consensus 192 ~e~~~~s~~i~----~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (391)
T PRK08256 192 LEDVLASPMIW----GPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTR 267 (391)
T ss_pred HHHHhcCCccc----CCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHH
Confidence 99999999999 8999999999999999999999999999997777899999987765544321 346
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHH
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~ 303 (814)
.+++++|+++|++++|||++|+||+|++++++++|+||||++ |||++||.|++|||+|+||+
T Consensus 268 ~a~~~a~~~ag~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~ 347 (391)
T PRK08256 268 AAAQQVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGL 347 (391)
T ss_pred HHHHHHHHHcCCCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHH
Confidence 799999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEE
Q psy12877 304 RIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIAL 350 (814)
Q Consensus 304 ~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~l 350 (814)
++++|+++||++ +.+|+... ...+|.+.|.+.+.+
T Consensus 348 ~~~~e~~~QL~g~ag~~Qv~~~------------~~~l~~~~G~~~~~~ 384 (391)
T PRK08256 348 AQCAELTWQLRGTAGARQVEGA------------RLALQHNLGLGGACV 384 (391)
T ss_pred HHHHHHHHHhcCCcCCCcCCcc------------ceEEEeccccceeEE
Confidence 999999999998 67787553 345566655554433
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-47 Score=423.72 Aligned_cols=299 Identities=32% Similarity=0.511 Sum_probs=258.9
Q ss_pred CceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 378 GDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
++|||||++||||+++ .+.++++++.+|+.+|+++||+|+|+.+++||.+++|++.+... +.++++.++..+|++..+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 5799999999999985 78899999999999999999999998889999999998876544 577888899999998668
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
|+++|+++|+||+.|+..|+++|++|.+|++||+|+|+|++.|+....... .. . ..+. .+.....|+++|
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~--~~-~-----~~~~--~~~~~~~m~~~a 151 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRP--NP-R-----LVEA--APEYYMGMGHTA 151 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCC--Cc-c-----cccc--ccchhhhHHHHH
Confidence 999999999999999999999999999999999999999988742110000 00 0 0000 111123589999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcC-CccccccceeccCC--------CCCcceEeccCCccc-cCCHHHhhc
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNN-VFSSQIVPVSIPQR--------KGKADIIVNEDEEYK-KINFEKFKS 605 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a-~~~~ei~p~t~~~~--------~~s~~i~~~~D~~~~-~~~~e~l~~ 605 (814)
++||++||+|||+||+||++||+||.. ||++ +|++||+|+++++. ++++ +++++|+.+| ++++|.|.+
T Consensus 152 ~~~~~~~g~tre~~a~~av~s~~~a~~-n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~-~~~~~d~~~rp~~~~e~l~~ 229 (391)
T PRK07661 152 EQVAVKYGISREDQDAFAVRSHQRAAK-ALAEGKFADEIVPVDVTLRTVGENNKLQEET-ITFSQDEGVRADTTLEILGK 229 (391)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHH-HHHcCCCccceeeeecccccccccCcccccc-eeEecCCCCCCCCCHHHHhc
Confidence 999999999999999999999999999 7776 99999999998752 2222 6789999998 599999999
Q ss_pred cccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 606 ~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
|+|+|.. ++|||++|||+++|||+|+||+|+|+|++++.+|++||+|++..+++|..++.++..|++++|+++|+ .+|
T Consensus 230 l~p~f~~-~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 308 (391)
T PRK07661 230 LRPAFNV-KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSD 308 (391)
T ss_pred CCCCcCC-CCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHH
Confidence 9999964 79999999999999999999999999999999999999999999998888888999999999999999 589
Q ss_pred eeEeh
Q psy12877 685 FWYDE 689 (814)
Q Consensus 685 ~~y~e 689 (814)
+||.|
T Consensus 309 id~~e 313 (391)
T PRK07661 309 IGLFE 313 (391)
T ss_pred CCEEE
Confidence 99998
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-47 Score=425.42 Aligned_cols=273 Identities=19% Similarity=0.214 Sum_probs=224.4
Q ss_pred cCCCCChHHHHH-HHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCc
Q psy12877 6 QAGLGQAPCRQA-VIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMN 84 (814)
Q Consensus 6 ~~~~~~~~ar~~-a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~ 84 (814)
+.+.+++++|.. +..+|++ .+|+++|+++|+||+.+|.+|+++|++|.+|+|||+|+|++|..++..........
T Consensus 69 ~~~~g~~~~~~~~~~~lGl~-~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~--- 144 (430)
T PRK06365 69 DHFQRQLLAGIMVQDYLGLV-PKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALA--- 144 (430)
T ss_pred ccccccchhhHHHHHhcCCC-CCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhccc---
Confidence 334466788875 7999998 59999999999999999999999999999999999999999987642110000000
Q ss_pred ccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCC
Q psy12877 85 LIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNED 164 (814)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~ 164 (814)
.+......+.. .....|++.++|||++||+|||++++|++++|+||.+||.+.
T Consensus 145 -~d~~~~~~~g~-~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~NP~A~------------------------- 197 (430)
T PRK06365 145 -SDTNFDYPLGG-FYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQ------------------------- 197 (430)
T ss_pred -ccccccccccC-ccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhh-------------------------
Confidence 01000011111 112348999999999999999999999999999999988862
Q ss_pred ccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC--CCCCCCC----
Q psy12877 165 EEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT--EPIDFPI---- 238 (814)
Q Consensus 165 ~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~--~p~~~~~---- 238 (814)
.|.++|+|+++++|+++ +|||++|||+++|||+|+||+|+++|++++.+|+ +|.+.+.... ++..+..
T Consensus 198 -~~~~~t~e~v~~s~~i~----~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~ 271 (430)
T PRK06365 198 -SPMKITVEDVRKSPMVS----YPLTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVP 271 (430)
T ss_pred -cCCCCCHHHHhcCCccc----cCcchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEeccccccccccccccc
Confidence 24456999999999998 8999999999999999999999999999999997 7877776532 2222111
Q ss_pred ----------------------cHHHHHHHHHHHcCCC--CCCccEEecCCCchHHHHHHhhhcCCCCC-----------
Q psy12877 239 ----------------------APAFAIPTLLKNGGVA--KQDVALWEINEAFSVVVLANIKKLDIDPS----------- 283 (814)
Q Consensus 239 ----------------------~~~~a~~~al~~aGl~--~~DID~~e~~d~fa~~~l~~~e~lg~~~~----------- 283 (814)
....+++++|+++||+ ++|||++|+||+|++++++++|+||||++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~ 351 (430)
T PRK06365 272 LLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGK 351 (430)
T ss_pred cccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCC
Confidence 1247999999999998 89999999999999999999999999984
Q ss_pred -------CcccCCCCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 284 -------KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 284 -------~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
|||++||+++.|||+|+||+++++|+++|||+
T Consensus 352 ~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG 390 (430)
T PRK06365 352 PELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQG 390 (430)
T ss_pred cCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999998
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-47 Score=424.11 Aligned_cols=305 Identities=28% Similarity=0.451 Sum_probs=259.7
Q ss_pred CceeEeceeecccccC------CCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcC
Q psy12877 378 GDVFIVSGSRTPMGSF------RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAG 450 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~------~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~G 450 (814)
++|+|||++||||+++ .|.+++.++.+|+.+|+++||+|+||++++||.+++|++.+... +.+.++......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 5799999999999986 48899999999999999999999999999999999999876443 3556777777778
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcc-ccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMN-LIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 529 (814)
++..+|+++++++|+||+.+|..|+++|++|.+|+||++|+|+|++.|+. .. ........ ..+.. +.. +......
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~-~~-~~~~~~~~~~~~~~-~~~-~~~~~~~ 157 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMG-DN-PHIEPNPKLLTDPK-YIE-YDLTTGY 157 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccc-cC-ccccCChhhccccc-cCc-ccccCCC
Confidence 87778999999999999999999999999999999999999999987752 10 00000000 00010 011 1112234
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p 608 (814)
.|++.|++||++||+|||++|+|+++||+||.+++++++|++||+|++++ +++++ +++++|+.+| ++|+|++.+++|
T Consensus 158 ~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~-~~~npda~~r~~~t~e~~~~~~~ 235 (394)
T PRK06445 158 VMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKK-KVVDVDQSVRPDTSLEKLAKLPP 235 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCc-eeeCCCCCCCCCCCHHHHhcCCC
Confidence 69999999999999999999999999999999999999999999999994 66665 5578899988 699999999999
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeE
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWY 687 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y 687 (814)
+|.+ .+|||++|||+++|||+++||+|++.|++++.+|++||+|++...++|..++.++..|++++|+++++ .+|++|
T Consensus 236 v~~~-~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~ 314 (394)
T PRK06445 236 AFKP-DGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDL 314 (394)
T ss_pred ccCC-CCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcCE
Confidence 9974 58999999999999999999999999999999999999999999888888888999999999999999 478999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.|
T Consensus 315 ~e 316 (394)
T PRK06445 315 WE 316 (394)
T ss_pred EE
Confidence 87
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=420.81 Aligned_cols=269 Identities=22% Similarity=0.332 Sum_probs=224.0
Q ss_pred HHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCc
Q psy12877 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGL 94 (814)
Q Consensus 15 r~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (814)
..++..+|++ .+|+++|+++|+||+.+|.+|+++|++|++|+|||+|+|+||+.++..... ...+ ... ... +
T Consensus 68 ~~~a~~lGl~-~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~-~~~~--~~~--~~~--~ 139 (398)
T PRK06157 68 TPLSRALRLP-NIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPV-ANPG--TLA--DMT--M 139 (398)
T ss_pred HHHHHHcCCC-CCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccc-cccc--cch--hcc--c
Confidence 4466689998 599999999999999999999999999999999999999998876421100 0000 000 000 0
Q ss_pred ccccccccHHHHHHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 95 SDVYNKIHMGNCAENTAKKFNISRDEQ----DEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 95 ~~~~~~~~~~~~a~~~~~~~gitre~~----~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
........|++.+++||++||+|||++ ++|++++|+||.+||++ ++|+++
T Consensus 140 ~~~~~~~~~al~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A--------------------------~~r~~~ 193 (398)
T PRK06157 140 PNVTAPGNFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGARNPKA--------------------------HLRKAV 193 (398)
T ss_pred ccCchHHHHHHHHHHHHHHhCCCHHHHcccccHHHHHHHHHHhcCChh--------------------------hcCCCC
Confidence 111112358999999999999999999 79999999999987665 445668
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC----------CCCCCCCcH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----------EPIDFPIAP 240 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~----------~p~~~~~~~ 240 (814)
|+|+|+++||++ +|++++|||+++|||+|+||+|+++|++++.+|.+||+|++.... ++..+. .+
T Consensus 194 t~e~v~~s~~v~----~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~ 268 (398)
T PRK06157 194 TEEQVLKAPMIA----GPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TT 268 (398)
T ss_pred CHHHHhcCCccc----CCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HH
Confidence 999999999999 899999999999999999999999999999844459999988643 222232 35
Q ss_pred HHHHHHHHHHcCCC--CCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCC
Q psy12877 241 AFAIPTLLKNGGVA--KQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGM 300 (814)
Q Consensus 241 ~~a~~~al~~aGl~--~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~ga 300 (814)
..+++++|+++||+ ++|||++|+||+|++++++++|+||||++ |+|++||+|++|||+|+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~ga 348 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGA 348 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccH
Confidence 67999999999998 79999999999999999999999999984 89999999999999999
Q ss_pred hHHHHHHHHHHHHHc--CCCCCcc
Q psy12877 301 SGARIVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 301 sG~~~l~e~v~qLr~--g~~gl~~ 322 (814)
||+++++|+++|||+ +.+|+..
T Consensus 349 tG~~~~~e~~~QLrg~ag~rQv~~ 372 (398)
T PRK06157 349 SGLRMLYEMYLQLLGRAGERQLKN 372 (398)
T ss_pred hHHHHHHHHHHHhcccccCccCCC
Confidence 999999999999998 6777755
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-47 Score=425.51 Aligned_cols=309 Identities=28% Similarity=0.456 Sum_probs=261.1
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
.++|+|||++||||+++.|.++++++.+|+.+|+++||+|+||++++||.+++|++.+...+.++++.+++.+|++..+|
T Consensus 4 ~~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P 83 (428)
T PRK08963 4 GDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD 83 (428)
T ss_pred CCeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCc
Confidence 46799999999999998889999999999999999999999999999999999998766656789999999999987789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCc----c------CCCCc----c---ccccc-c
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGE----T------KYGGM----N---LIDGI-V 518 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~----~------~~~~~----~---~~~~~-~ 518 (814)
+++|+++|+||++||..|+++|++|.+|+||++|+|+||+.|+...... . ..+.. . ....+ .
T Consensus 84 ~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (428)
T PRK08963 84 AYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPV 163 (428)
T ss_pred ceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhcccc
Confidence 9999999999999999999999999999999999999998875321100 0 00000 0 00000 0
Q ss_pred ccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-c
Q psy12877 519 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-K 597 (814)
Q Consensus 519 ~~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~ 597 (814)
.+.+.+......|++.|++||++||+|||++|+|+++||+||.++...++|++||+|+++..+. ..+++|+.+| +
T Consensus 164 ~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a----~~~~~D~~~r~~ 239 (428)
T PRK08963 164 PPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK----QPLEEDNNIRGD 239 (428)
T ss_pred CcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCc----eeeCCCCCCCCC
Confidence 1122221124579999999999999999999999999999999988899999999999875332 2578999998 6
Q ss_pred CCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC-CCCchHHhHHHHHH
Q psy12877 598 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI-DFPIAPAFAIPTLL 676 (814)
Q Consensus 598 ~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~-~~~~g~~~A~~~~~ 676 (814)
+|+|++.++||+|.++.+|||++|||+++|||+|+||+|+++|++++.+|++||+|++.++.+|. .+..++..|++++|
T Consensus 240 ~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al 319 (428)
T PRK08963 240 STLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLAL 319 (428)
T ss_pred CCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHHHHHHH
Confidence 99999999999996446889999999999999999999999999999999999999998876663 45677889999999
Q ss_pred HhcCC-CcceeEeh
Q psy12877 677 KNGGQ-LSQFWYDE 689 (814)
Q Consensus 677 ~~~~~-~sq~~y~e 689 (814)
+++|+ .+|+|+.|
T Consensus 320 ~~AGl~~~DiD~~E 333 (428)
T PRK08963 320 ERAGLTLADLTLID 333 (428)
T ss_pred HHcCCCHHHCCEEE
Confidence 99999 68999987
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-46 Score=419.34 Aligned_cols=309 Identities=30% Similarity=0.426 Sum_probs=251.8
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+...+++++|..++..+....+|+++|+++|+||+.++.+|+++|++|.+|+|||+|+|+||..+... .
T Consensus 51 g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~--~----- 123 (393)
T cd00826 51 GQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENN--A----- 123 (393)
T ss_pred EEccCCcccCcHHHHHHHHcCCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccc--c-----
Confidence 556555456789997555544444899999999999999999999999999999999999999998765200 0
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCc-eee
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA-DII 160 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~-~~~ 160 (814)
. . ..+ ..+..+|| +||+++.++..++.++...++.|.+.+++.||.+++++|+. ...
T Consensus 124 ----~----------~---~~~----~~~~~~~~-~r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~ 181 (393)
T cd00826 124 ----K----------E---KHI----DVLINKYG-MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDA 181 (393)
T ss_pred ----c----------c---chh----HHHHHHhC-ChhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEec
Confidence 0 0 000 12455788 89999999999999999999999999999999887754432 233
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC--CccEEEEEEEE------ecCC
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA--KPLARIIAYFD------AATE 232 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~--~p~a~I~g~~~------~~~~ 232 (814)
++....|+++|+|+++++||++.+ ++|+|++|||+++|||+|+||+|+++|+++++ +| ++|.+.+. ...+
T Consensus 182 np~a~~~~~~t~e~~~~~~~i~~~-~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~-v~i~~~a~~~~~~~~~~~ 259 (393)
T cd00826 182 DEYIQFGDEASLDEIAKLRPAFDK-EDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKA-REIQALEMITDMASTFED 259 (393)
T ss_pred CCCCCCCCCCCHHHHhcCCCccCC-CCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccc-cccceEEEEEeeeccccC
Confidence 455555677999999999999854 48999999999999999999999999999986 33 35555543 3334
Q ss_pred CC----CCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC------------------CCcccCCC
Q psy12877 233 PI----DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP------------------SKVNVHGG 290 (814)
Q Consensus 233 p~----~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~------------------~~vN~~GG 290 (814)
|. .+..++..|++++|+++||+++|||++|+||+|++++++++|+||||+ .|||++||
T Consensus 260 ~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG 339 (393)
T cd00826 260 KKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGG 339 (393)
T ss_pred ccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCc
Confidence 54 456778999999999999999999999999999999999999999998 49999999
Q ss_pred CccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEe
Q psy12877 291 AVSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALIS 352 (814)
Q Consensus 291 ~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~ 352 (814)
+|++|||+|+||+++++|+++||++ +.+|+... ...++|++||+|.+++||
T Consensus 340 ~la~GhP~gAtG~~~~~e~~~qL~g~ag~~q~~~~-----------~~~~~~~~Gg~g~a~~~~ 392 (393)
T cd00826 340 AIAIGHPIGASGAAICAELCFELKGEAGKRQGAGA-----------GLALLCIGGGGGAAMCIE 392 (393)
T ss_pred hhhcCCCccccHHHHHHHHHHHHhhhhccccCCCc-----------CEEEEEcCCCceeEEEEe
Confidence 9999999999999999999999997 55555332 344569999999999997
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=422.23 Aligned_cols=309 Identities=25% Similarity=0.429 Sum_probs=261.3
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
.++|+|||++||||+++.|.++++++.+|+.++++++|+|+||++++||.+++|++.+...+.++++.+++.+|++..+|
T Consensus 6 ~~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p 85 (430)
T TIGR02446 6 GERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD 85 (430)
T ss_pred CCCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCc
Confidence 46899999999999999899999999999999999999999999999999999998775556789999999999987899
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCC--c--------cCCCC-c---cc---cccccc
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG--E--------TKYGG-M---NL---IDGIVY 519 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~--~--------~~~~~-~---~~---~~~~~~ 519 (814)
+++|+++|+||+.|+..|+++|++|.+|+||++|+|+||+.|+..... . ...+. . .. .+.+..
T Consensus 86 ~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
T TIGR02446 86 AYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPV 165 (430)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhccc
Confidence 999999999999999999999999999999999999999887532210 0 00000 0 00 000000
Q ss_pred ccccccc-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-c
Q psy12877 520 DGLSDVY-NKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-K 597 (814)
Q Consensus 520 ~~~~~~~-~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~ 597 (814)
+.....+ ....|+++|++||++||+|||+||+|+++||+||.+++.++.|++||+|+.+..+. ..+++|+.+| +
T Consensus 166 ~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a----~~~~~D~~~r~~ 241 (430)
T TIGR02446 166 PPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK----QWIAEDNNIRHN 241 (430)
T ss_pred CcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCc----eEecccCCCCCC
Confidence 1100111 14469999999999999999999999999999999999999999999998643221 3489999998 6
Q ss_pred CCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC-CCCCchHHhHHHHHH
Q psy12877 598 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP-IDFPIAPAFAIPTLL 676 (814)
Q Consensus 598 ~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p-~~~~~g~~~A~~~~~ 676 (814)
+|+|++.++||+|.+..+|||++|||+++|||+|+||+|+++|++++++|+++|+|++..+.+| ..+..++..|++++|
T Consensus 242 ~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a~~~al 321 (430)
T TIGR02446 242 STLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYATPLAL 321 (430)
T ss_pred CCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHHHHHHH
Confidence 9999999999999754689999999999999999999999999999999999999999887777 456778889999999
Q ss_pred HhcCC-CcceeEeh
Q psy12877 677 KNGGQ-LSQFWYDE 689 (814)
Q Consensus 677 ~~~~~-~sq~~y~e 689 (814)
+++|+ .+|+|+.|
T Consensus 322 ~~Agl~~~Did~~E 335 (430)
T TIGR02446 322 QRAGLALSDLTLID 335 (430)
T ss_pred HHcCCCHHHCCEEE
Confidence 99999 58899987
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=419.52 Aligned_cols=277 Identities=22% Similarity=0.283 Sum_probs=235.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.+++++.++..+|++ .+|.++++++|+|++.++.+|+++|++|.+|+||++|+|++|..|..... ..+.... .+.
T Consensus 52 ~~~~a~~va~~lGl~-~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~-~~~~~~~-~~~-- 126 (375)
T cd00829 52 QSFPGALIAEYLGLL-GKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEA-GGRASDL-EWE-- 126 (375)
T ss_pred ccchHHHHHHHcCCC-CcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchh-hccccch-hhh--
Confidence 468999999999998 89999999999999999999999999999999999999999987641110 0010000 000
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
....+........|++.+++||++||+|+|++++|++++|+||.+||++ +|++ +
T Consensus 127 ~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A-~~~~-------------------------~ 180 (375)
T cd00829 127 GPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNPYA-QFRK-------------------------P 180 (375)
T ss_pred hcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCChh-hcCC-------------------------C
Confidence 0001111112356999999999999999999999999999999999887 4443 4
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-------CCCcHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-------FPIAPAF 242 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-------~~~~~~~ 242 (814)
+|+|++.++||++ +|+|++|||+++|||+|+||+|+++|+++ .+|.++|+|++...+.+.. +..++..
T Consensus 181 ~t~d~~~~~~~i~----~pl~~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 255 (375)
T cd00829 181 ITVEDVLNSRMIA----DPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARL 255 (375)
T ss_pred CCHHHHhcCCccc----CCCchhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHH
Confidence 6999999999999 99999999999999999999999999999 5566799999998765542 5567788
Q ss_pred HHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHH
Q psy12877 243 AIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGAR 304 (814)
Q Consensus 243 a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~ 304 (814)
+++++|+++||+++|||++|+||+|++++++++|+||||++ |||++||++++|||+|++|++
T Consensus 256 a~~~al~~Agl~~~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~ 335 (375)
T cd00829 256 AARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLA 335 (375)
T ss_pred HHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHH
Confidence 99999999999999999999999999999999999999984 899999999999999999999
Q ss_pred HHHHHHHHHHc--CCCCCcc
Q psy12877 305 IVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 305 ~l~e~v~qLr~--g~~gl~~ 322 (814)
+++|+++|||+ +.+|+..
T Consensus 336 ~~~e~~~qlrg~ag~~qv~~ 355 (375)
T cd00829 336 QAVEAVRQLRGEAGARQVPG 355 (375)
T ss_pred HHHHHHHHhcCCcccccCCC
Confidence 99999999998 6778754
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=422.91 Aligned_cols=297 Identities=21% Similarity=0.257 Sum_probs=233.9
Q ss_pred CcccccCC--CCChHHHHHHHHcCCC------CCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCc
Q psy12877 1 MGNVCQAG--LGQAPCRQAVIFAGLP------KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY 72 (814)
Q Consensus 1 ~g~~~~~~--~~~~~ar~~a~~~Gl~------~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~ 72 (814)
+||+++.+ .++|++|++++.+|++ ..+|+++|+++|+||+.||.+|+++|++|++|+|||+|+|+||+.|..
T Consensus 77 ~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~ 156 (438)
T PTZ00455 77 VGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSAR 156 (438)
T ss_pred EEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcch
Confidence 36666655 4589999999999887 689999999999999999999999999999999999999999988752
Q ss_pred cccCcccCCCCcccccccccCcccccccccHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeec
Q psy12877 73 LNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFN-ISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIP 151 (814)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g-itre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~ 151 (814)
.... .......... ...+.+......+++. .+||++|| +|||++++||+++|+++..||.+.+.++++.
T Consensus 157 ~~~~--~~~~~~~~~~--~~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t----- 226 (438)
T PTZ00455 157 VGGD--YLARAADYRR--QRKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLS----- 226 (438)
T ss_pred hhhh--hccchhhccc--cccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCC-----
Confidence 1100 0000000000 0001111001124444 39999997 9999999999999999999988743333221
Q ss_pred CCCCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCc----cEEEEEEE
Q psy12877 152 QRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKP----LARIIAYF 227 (814)
Q Consensus 152 ~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p----~a~I~g~~ 227 (814)
.....|+.+| + .++++++++. .|++++|||+++|||+|+||+|+++|++++++| .+||++++
T Consensus 227 ------~~~~~d~~~~---~-~e~l~s~~i~----~pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~ 292 (438)
T PTZ00455 227 ------LEFCTGASDK---N-PKFLGNETYK----PFLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLA 292 (438)
T ss_pred ------ceeecccccc---c-hhhhcCCccc----CcCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEE
Confidence 0123345555 2 2456778887 899999999999999999999999999999888 57999999
Q ss_pred EecC----CC---CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC------------------
Q psy12877 228 DAAT----EP---IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP------------------ 282 (814)
Q Consensus 228 ~~~~----~p---~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~------------------ 282 (814)
..++ +| ..++.+ ..|++++|+++|++++|||++|+||+|++++++++|+||||+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~ 371 (438)
T PTZ00455 293 CASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGR 371 (438)
T ss_pred EecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCC
Confidence 9865 44 333333 689999999999999999999999999999999999999998
Q ss_pred CCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCcc
Q psy12877 283 SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 283 ~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~ 322 (814)
.|||++||++++|||+|+||+++++|+++|||+ +++|+..
T Consensus 372 ~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag~~Qv~~ 413 (438)
T PTZ00455 372 IPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCGEYQMKN 413 (438)
T ss_pred ceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhccccCCCCC
Confidence 499999999999999999999999999999998 6788754
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=419.03 Aligned_cols=299 Identities=30% Similarity=0.422 Sum_probs=258.9
Q ss_pred ceeEeceeeccccc-CCCCCCCCCHHHHHHHHHHHHHHH-cCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 379 DVFIVSGSRTPMGS-FRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 379 ~V~IvG~~rTp~~~-~~g~~~~~~~~eLa~~A~~~AL~d-AGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
+|+|||++||||++ +.|+++++++.+|+.++++++|++ +||++++||.+++|++.+... +.++++.+++..|++..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 49999999999998 478899999999999999999996 699999999999999875444 567999999899999889
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
|+++|+++|+||+.||+.|+++|++|.+|++|++|+|+||+.|..... ... ..+.+.. .....+|+++|
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~---~~~------~~~~~~~--~~~~~~~~~~a 149 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGV---DFH------PGMSLHV--AKAAGMMGLTA 149 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCC---Ccc------hhHHhhh--ccccchHHHHH
Confidence 999999999999999999999999999999999999999988752110 000 0000100 11124799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
++||++||+|||+||+||++||+||.+++.+++|++||+|+++++..+. .+++++|+.+| ++++|++.++||+|.+..
T Consensus 150 ~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~-~~~~~~da~~r~~~t~e~~~~~~~v~~p~~ 228 (385)
T TIGR02445 150 EMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGF-LKQFDYDEVIRPETTVESLAALRPAFDPKN 228 (385)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCC-ceeeCCCCCCCCCCCHHHHhcCCceecCCC
Confidence 9999999999999999999999999999999999999999998765443 35688999998 699999999999985324
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+.||++|||+++|||+++||+|+++|++++.+|+++|+|++..+.+|..++.++..|++++|+++|+ .+|++|.|
T Consensus 229 g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~E 304 (385)
T TIGR02445 229 GTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFE 304 (385)
T ss_pred CceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence 5599999999999999999999999999999999999999998888877777899999999999999 58999987
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=416.56 Aligned_cols=276 Identities=18% Similarity=0.254 Sum_probs=229.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc-cCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~-~~~~~~~~~~~~~~ 88 (814)
..++++.++..+|++ ..|.++|+++|+||+.+|..|+++|++|.+|+|||+|+|+||+.+.... ..........+
T Consensus 57 ~~~~a~~v~~~lGl~-~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~--- 132 (385)
T PRK12578 57 ELYPAPIVAEYSGLT-GKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQW--- 132 (385)
T ss_pred cCChHHHHHHHhCCC-CCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhccccccccc---
Confidence 356899999999998 5778999999999999999999999999999999999999998654211 00000000000
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.........+..+++.+++||++||+|+|++++|++++|+||..||++ +|+++
T Consensus 133 --~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a-~~~~~------------------------ 185 (385)
T PRK12578 133 --EYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMNPKA-HFQKP------------------------ 185 (385)
T ss_pred --ccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcCChh-hcCCC------------------------
Confidence 000011111234688899999999999999999999999999999864 55544
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC------CCCCCCC-cHH
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT------EPIDFPI-APA 241 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~------~p~~~~~-~~~ 241 (814)
+++|+++++|+++ +|+|++|||+++|||+|+||+|+++|++++.+|.++|+|++...+ +|+.... ++.
T Consensus 186 -i~~e~v~~s~~i~----~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~ 260 (385)
T PRK12578 186 -VTVEEVLKSRAIS----WPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQ 260 (385)
T ss_pred -CCHHHHhcCCccC----CCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHH
Confidence 4899999999998 899999999999999999999999999999766679999998643 2232332 456
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHH
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~ 303 (814)
.+++++|+++|++++|||++|+||+|+++++.++|+||||++ |||++||+|++|||+|+||+
T Consensus 261 ~a~~~al~~Agi~~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~ 340 (385)
T PRK12578 261 LAARQAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGL 340 (385)
T ss_pred HHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHH
Confidence 899999999999999999999999999999999999999984 89999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCCCc
Q psy12877 304 RIVIHLCHALKS--GQKGQL 321 (814)
Q Consensus 304 ~~l~e~v~qLr~--g~~gl~ 321 (814)
++++|+++|||+ +.+|+.
T Consensus 341 ~~v~e~~~qLrg~ag~~qv~ 360 (385)
T PRK12578 341 SMIYEITKQLRDEAGKLQQP 360 (385)
T ss_pred HHHHHHHHHHhCCcccCcCC
Confidence 999999999998 667765
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-46 Score=412.53 Aligned_cols=301 Identities=33% Similarity=0.543 Sum_probs=260.8
Q ss_pred CceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 378 GDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
++|||||++||||+++ .+.+++.++.+|+.+|+++||+|+||++++||.+++|++.+... ++++++.+++.+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 5799999999999984 77788999999999999999999999999999999999887654 457999999999998678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
|+++|+++|+||+.||+.|+++|++|++|++|++|+|+||+.|.... ....+ .....+. .......|+.++
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~--~~~~~-----~~~~~~~--~~~~~~~m~~~a 152 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMN--RHMLR-----EGWLVEH--KPEIYWSMLQTA 152 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCC--CcCcc-----chhhhcc--CCccccCHHHHH
Confidence 99999999999999999999999999999999999999998875211 00000 0000000 000013689999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccC----C-CC---CcceEeccCCccc-cCCHHHhhcc
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQ----R-KG---KADIIVNEDEEYK-KINFEKFKSL 606 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~----~-~~---s~~i~~~~D~~~~-~~~~e~l~~~ 606 (814)
|+++.+|+++||++|+|+..||++|..+..++.|++||+|+...+ . .+ .+.+++++||.+| ++|+|+|.++
T Consensus 153 e~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l 232 (392)
T PRK07108 153 ENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKI 232 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999998753 1 11 1136789999998 6999999999
Q ss_pred ccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 607 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 607 ~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
||+|. ++|+|++|||+++|||+|+||+|+++|++++.+|+++|+|++..+++|..++.++..|++++|+++|+ .+|+
T Consensus 233 ~~~~~--~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Di 310 (392)
T PRK07108 233 RSALP--GGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDI 310 (392)
T ss_pred CCCCC--CCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHc
Confidence 99995 79999999999999999999999999999999999999999999999988888999999999999999 5899
Q ss_pred eEeh
Q psy12877 686 WYDE 689 (814)
Q Consensus 686 ~y~e 689 (814)
+|.|
T Consensus 311 d~~e 314 (392)
T PRK07108 311 DLWE 314 (392)
T ss_pred CchH
Confidence 9987
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-46 Score=417.85 Aligned_cols=298 Identities=16% Similarity=0.190 Sum_probs=239.0
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
...+++++..+|+. .+|.++++.+|+|++.+|.+|+++|++|++|+|||+|.|++|..... ...........+.. ..
T Consensus 61 ~~~a~~va~~lG~~-~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~-~~~~~~~~~~~~~~-~~ 137 (399)
T PRK06059 61 FVAGATFAQALGWN-GAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFA-PVGGERPDDPDWLR-FH 137 (399)
T ss_pred ccHHHHHHHHhCCC-CCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCc-ccccccccccchhh-cc
Confidence 34578999999996 68999999999999999999999999999999999999999853111 10000000000000 00
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+.++.. ...|++.+++||++||+|+|+++.+++++|++|..||++ +.|+++
T Consensus 138 ~~g~~~---~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A--------------------------~~r~~~ 188 (399)
T PRK06059 138 LIGATN---PVYFALLARRRMDLYGATVEDFAQVKVKNARHGLLNPNA--------------------------RYRKEV 188 (399)
T ss_pred cCCCcc---HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHh--------------------------hcCCCC
Confidence 112111 246999999999999999999999999999998766554 556678
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHc--CCCccEEEEEEEEecC-CC----CCCCCc----
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKF--NAKPLARIIAYFDAAT-EP----IDFPIA---- 239 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~--g~~p~a~I~g~~~~~~-~p----~~~~~~---- 239 (814)
|+|+++++||++ +|+|++|||+++|||+|+||+|+++|+++ +.++.+||++++.... .+ ......
T Consensus 189 t~e~v~~s~~i~----~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~ 264 (399)
T PRK06059 189 TVEDVLASPVVS----DPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDST 264 (399)
T ss_pred CHHHHhcCCccc----CCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEeccccccccccccccccccc
Confidence 999999999999 89999999999999999999999999999 6555569999998652 11 111111
Q ss_pred ---H-------HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCC
Q psy12877 240 ---P-------AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGA 291 (814)
Q Consensus 240 ---~-------~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~ 291 (814)
+ ..+++++|+++||+++|||++|+||+|+++++.++|+||||++ |||++||+
T Consensus 265 ~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~ 344 (399)
T PRK06059 265 AAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGL 344 (399)
T ss_pred ccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCcc
Confidence 1 3679999999999999999999999999999999999999975 99999999
Q ss_pred ccccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 292 VSLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 292 la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++.|||+|+||+++++|+++|||+ +.+|+... +++....|+++|++.+++||.
T Consensus 345 la~Ghp~gatG~~~~~e~~~qLrg~ag~~Qv~~a---------~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 345 ACFGEAIPAQAIAQVCELTWQLRGQAGGRQVEGA---------RVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ccCCccCCccHHHHHHHHHHHhccCcCCccCCCc---------cEEEEeccCCcccceEEEecC
Confidence 999999999999999999999998 55666443 334444577788999999973
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=411.68 Aligned_cols=301 Identities=31% Similarity=0.435 Sum_probs=260.5
Q ss_pred CCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHH-cCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~d-AGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~ 453 (814)
|++|+|||++||||+++ .|.++++++.+|+.++++++|++ +||++++||.+++|++.+... +.++++.+++.+|++.
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~ 80 (387)
T PRK08947 1 MEDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH 80 (387)
T ss_pred CCcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC
Confidence 36899999999999984 78999999999999999999995 899999999999999875544 4778999999999987
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
.+|+++|+++|+||+.|+..|+++|++|++|+||++|+|+||+.|..... .. .....+.+ ......|++
T Consensus 81 ~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~---~~------~~~~~~~~--~~~~~~~~~ 149 (387)
T PRK08947 81 SVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGV---DF------HPGLSKNV--AKAAGMMGL 149 (387)
T ss_pred CCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCcccccc---Cc------chhhhhhc--cccchHHHH
Confidence 79999999999999999999999999999999999999999987742110 00 00000101 111247999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
.|++||++||+|||+||+|+++||+||.+++|+++|++||+|+.+++..+.+ .+++.|+.+| ++|+|++.++||+|.+
T Consensus 150 ~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p 228 (387)
T PRK08947 150 TAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVL-KLFDYDEVIRPETTVEALAALRPAFDP 228 (387)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCc-eeecCCCCCcCCCCHHHHhcCCceeeC
Confidence 9999999999999999999999999999988999999999999988755443 5688999998 6999999999999853
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
..+.||++|||+++|||+|+||+|++.|++++.+|++||+|++..+.+|..++.++..+++++|+++++ .+|++|.|
T Consensus 229 ~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~E 306 (387)
T PRK08947 229 VNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFE 306 (387)
T ss_pred CCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEE
Confidence 245599999999999999999999999999999998999999998888877777899999999999999 58999998
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=416.62 Aligned_cols=288 Identities=18% Similarity=0.292 Sum_probs=228.5
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCcccccc-
Q psy12877 21 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYN- 99 (814)
Q Consensus 21 ~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 99 (814)
.++. ++|+++++++|+||+.+|..|+.+|++|++|+|||+|+|++|..|...... .++...+.+ ...+..++.
T Consensus 76 ~~~~-g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~ 149 (403)
T PRK06289 76 PALW-GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAE--HLGAAAWTG---HEGQDARFPW 149 (403)
T ss_pred hcCC-CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHH--hhhcccccc---cccccCCCcc
Confidence 3453 579999999999999999999999999999999999999999765421100 011000111 011111112
Q ss_pred cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCC
Q psy12877 100 KIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLA 179 (814)
Q Consensus 100 ~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~ 179 (814)
...|++.+++||++||+|||++++|++++|+||.+||++.+ +.++. .++++.|++..+|
T Consensus 150 ~~~~al~a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~-~~~~~--------------------~~~~~~~d~~~s~ 208 (403)
T PRK06289 150 PSMFARVADEYDRRYGLDEEHLRAIAEINFANARRNPNAQT-RGWAF--------------------PDEATNDDDATNP 208 (403)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhc-Ccccc--------------------ccccchhhhhcCC
Confidence 23489999999999999999999999999999999999843 33220 0236889999999
Q ss_pred ceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC-CccEEEEEEEEecCC-------------CCCCCCcHHHHHH
Q psy12877 180 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATE-------------PIDFPIAPAFAIP 245 (814)
Q Consensus 180 ~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~-~p~a~I~g~~~~~~~-------------p~~~~~~~~~a~~ 245 (814)
++. +|||++|||+++|||+|+||+|+|+|++++. +|.+||+|++..... +..+ ..+..|++
T Consensus 209 ~i~----~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~ 283 (403)
T PRK06289 209 VVE----GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVL 283 (403)
T ss_pred ccc----CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHH
Confidence 997 9999999999999999999999999999986 676799999986331 2222 23567999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHHHHH
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGARIVI 307 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~~l~ 307 (814)
++|+++||+++|||++|+||+|++++++++|+||||++ |+|++||+|+.|||+|+||+++++
T Consensus 284 ~a~~~Agi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~ 363 (403)
T PRK06289 284 DAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLL 363 (403)
T ss_pred HHHHHcCCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHH
Confidence 99999999999999999999999999999999999985 899999999999999999999999
Q ss_pred HHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEE
Q psy12877 308 HLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIAL 350 (814)
Q Consensus 308 e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~l 350 (814)
|+++|||+ +.+|+... ....+.|+||+++.+++
T Consensus 364 e~~~QLrg~ag~~Qv~~~----------~~~l~~~~gg~~~~~~~ 398 (403)
T PRK06289 364 DAAKQVTGTAGDYQVEGA----------KTFGTLNIGGSTTTTVS 398 (403)
T ss_pred HHHHHHhccccCccCCch----------heEEEEecCcccceEEE
Confidence 99999998 66766442 12334466666665443
|
|
| >KOG3350|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=358.87 Aligned_cols=142 Identities=45% Similarity=0.773 Sum_probs=129.4
Q ss_pred HHHHHHhcCCCcceeEehhhhhhchHHHHhccCCCCeEEEEecCccc--HHhhhhC------------------------
Q psy12877 672 IPTLLKNGGQLSQFWYDENTTQRLSEEAVCRAGKEGSIALISCPTLY--PKIRELA------------------------ 725 (814)
Q Consensus 672 ~~~~~~~~~~~sq~~y~e~t~~~l~~~~~~~~~~~g~iA~~s~ps~~--~~~~~~~------------------------ 725 (814)
+-..++|+||+||+||..+|+.+|+.|.+..+++|++||||||||+| +++++..
T Consensus 40 ~i~~~~eDwQlsqfwy~~eta~~La~e~v~~s~e~~rIacvS~Psly~y~k~re~~~~~~~v~lfEfDkRFe~yg~eFvf 119 (217)
T KOG3350|consen 40 IIEKIGEDWQLSQFWYSDETARKLAAERVEASGEGSRIACVSCPSLYVYQKKREIEIPHDQVYLFEFDKRFELYGTEFVF 119 (217)
T ss_pred hhhhcccchhhhhhhcCHHHHHHHHHHHHhhcccCceEEEEeCchHHhhhhhhhccCCceeEEEEEehhhHHhccceeEE
Confidence 34678999999999999999999999999999999999999999965 3333320
Q ss_pred ---CCCCCCcccccccccEEEeCCCCCCHHHHHHHHHHhhccc---cceeeeehHHHHHHHHhhcCcceeeeeecccCCC
Q psy12877 726 ---PDAKDVPRELSAHYDLVVLDPPFLSDECLTKAAVTAKLPL---FVSLTVSGEIMQDLALRLLGVKKCKFIPRHKNNL 799 (814)
Q Consensus 726 ---~~~~~~~~~~~~~~d~~~~dppfl~~~c~~k~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~f~p~h~~~l 799 (814)
..|.++|++||++||+||+||||||+||++|+++|||.|. +|+|+|||++|++++.++|++++|+|+|+|.|||
T Consensus 120 YDyN~p~dlp~~lk~~fdiivaDPPfL~~eCl~Kts~tik~L~r~~~kvilCtGeimee~~s~~l~~~~~sF~PeH~~nL 199 (217)
T KOG3350|consen 120 YDYNCPLDLPDELKAHFDIIVADPPFLSEECLAKTSETIKRLQRNQKKVILCTGEIMEEWASALLPVLKCSFRPEHERNL 199 (217)
T ss_pred eccCCCCCCHHHHHhcccEEEeCCccccchhhhhhHHHHHHHhcCCceEEEechhHhHHHHHHHhhhhhccccchhhccc
Confidence 1368999999999999999999999999999999999987 4899999999999999999999999999999999
Q ss_pred ccceeeeecCCCCC
Q psy12877 800 ANDFACFVNFDSGL 813 (814)
Q Consensus 800 ~~~f~~~~n~~~~~ 813 (814)
+|||+||+||++++
T Consensus 200 aNeF~cyaNf~~~~ 213 (217)
T KOG3350|consen 200 ANEFRCYANFNLDE 213 (217)
T ss_pred ccceeEEEeccchh
Confidence 99999999999874
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-45 Score=408.89 Aligned_cols=310 Identities=46% Similarity=0.708 Sum_probs=261.3
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||+++|||+|+.|.+++.++.+|+.+|+++||+|+||+++|||.+++|+..+...+..+++.+...+|++...|.
T Consensus 2 ~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~ 81 (393)
T PRK05790 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPA 81 (393)
T ss_pred CceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCce
Confidence 57999999999999988888899999999999999999999999999999999876654556677778888999756789
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
++++.+|+||+.+|..|+++|++|.+|+||++|+|+||+.|.... +.....+.....+.+.++..+..+....|++.|
T Consensus 82 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05790 82 LTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITA 161 (393)
T ss_pred eeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHH
Confidence 999999999999999999999999999999999999998764211 111111100000101111112222235799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
++||++||+|||+||+|++++|+||.+++.+++|+++|+|+++.++.+++ ++++.|+.++ +++.|+|.++||+|++ .
T Consensus 162 ~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~-~~~~~d~~~~~~~~~e~l~~~~~v~~~-~ 239 (393)
T PRK05790 162 ENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAKLRPAFDK-D 239 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCc-eEecCCCCCCCCCCHHHHhCCCCccCC-C
Confidence 99999999999999999999999999955678999999999988765554 5578899998 6999999999999975 5
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|||++|||+++|||+++||+|+|+|++++.+|+++|+|++.++.+|..+..++..|++++|+++++ .+|+|+.|
T Consensus 240 g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e 315 (393)
T PRK05790 240 GTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLIE 315 (393)
T ss_pred CCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEEE
Confidence 8999999999999999999999999999999999999999998888877777888999999999999 58999987
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-45 Score=410.87 Aligned_cols=303 Identities=30% Similarity=0.485 Sum_probs=256.6
Q ss_pred CCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~ 454 (814)
.++|+|||++||||+++ .+.+.+.++.+|+.+|+++||+|+||+++|||.+++|+..+... .++.++.+++.+|++..
T Consensus 45 ~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~ 124 (452)
T PLN02287 45 GDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPET 124 (452)
T ss_pred CCCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCC
Confidence 45799999999999984 67778899999999999999999999999999999998865544 34577889999999866
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+|+++++++|+||+.||..|+++|++|.+|+||++|+|+|++.|..... ..... .. .+..... ...+||++
T Consensus 125 ~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~---~~~~~--~~--~~~~~~~--~~~~~g~~ 195 (452)
T PLN02287 125 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEG---GVNPR--VE--SFSQAQD--CLLPMGIT 195 (452)
T ss_pred cceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhcc---ccCch--hh--ccccccc--cCcCHHHH
Confidence 8999999999999999999999999999999999999999987742110 00000 00 0011011 13459999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcC-CccccccceeccCC--C-C-CcceEeccCCccc-cCCHHHhhcccc
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNN-VFSSQIVPVSIPQR--K-G-KADIIVNEDEEYK-KINFEKFKSLAT 608 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a-~~~~ei~p~t~~~~--~-~-s~~i~~~~D~~~~-~~~~e~l~~~~p 608 (814)
+++||++||+|||+||+|+++||+||.+ ||.+ +|+++|+|+.+++. . + .++++++.|+.+| +++.|+|.++||
T Consensus 196 a~~y~~~yGitrE~la~vAvksh~nAa~-np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~ 274 (452)
T PLN02287 196 SENVAERFGVTREEQDQAAVESHRKAAA-ATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKP 274 (452)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHh-hhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999 7875 89999999987542 1 2 1235689999998 789999999999
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeE
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWY 687 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y 687 (814)
+|++ .+|||++|||+++|||+|+||+|+|.|++++.+|++++.+++..+.+|..++.++..|++++|+++|+ .+|+||
T Consensus 275 v~~~-~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~ 353 (452)
T PLN02287 275 VFKK-NGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDL 353 (452)
T ss_pred ccCC-CCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCE
Confidence 9975 69999999999999999999999999999999999999999987778888888899999999999999 689999
Q ss_pred ehh
Q psy12877 688 DEN 690 (814)
Q Consensus 688 ~e~ 690 (814)
.|-
T Consensus 354 ~Ei 356 (452)
T PLN02287 354 FEI 356 (452)
T ss_pred EEe
Confidence 873
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-45 Score=410.36 Aligned_cols=307 Identities=31% Similarity=0.465 Sum_probs=255.7
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
+++|+|||++||||+++.|.++++++.+|+.+|+++||+|+||++++||.+++|+..+.....++++.++..+|++..+|
T Consensus 2 ~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 81 (426)
T PRK08170 2 ARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP 81 (426)
T ss_pred CCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce
Confidence 56899999999999998888888999999999999999999999999999999988654444577899999999976689
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCC----ccCCCC-------cc---cc-ccccc--
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG----ETKYGG-------MN---LI-DGIVY-- 519 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~----~~~~~~-------~~---~~-~~~~~-- 519 (814)
.++++++|+||+.+|..|+++|++|.+|+||++|+|+|++.|+..... ...... .. .. ..+..
T Consensus 82 ~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (426)
T PRK08170 82 AWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPV 161 (426)
T ss_pred eeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccc
Confidence 999999999999999999999999999999999999999876421110 000000 00 00 00000
Q ss_pred ----cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCcc
Q psy12877 520 ----DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEY 595 (814)
Q Consensus 520 ----~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~ 595 (814)
.++..+.....|++.|++||++||+|||+||+|+++||+||.+++..++|+ +|+|++ . ..+. .+..||.+
T Consensus 162 ~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~-~-~~~n---p~a~de~~ 235 (426)
T PRK08170 162 IGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLF-D-RDGK---FYDHDDGV 235 (426)
T ss_pred cccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeee-c-CCCC---eeccCCCC
Confidence 122222223579999999999999999999999999999988766669998 999998 2 2222 46889999
Q ss_pred cc-CCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHH
Q psy12877 596 KK-INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPT 674 (814)
Q Consensus 596 ~~-~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~ 674 (814)
|+ +|+|++.++||+|.++.++||++|||+++|||+|+||+|+|+|++++.+|+++|++++....+|..++.++..|+++
T Consensus 236 r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~ 315 (426)
T PRK08170 236 RPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAATP 315 (426)
T ss_pred CCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccHHHHHHH
Confidence 85 99999999999996335789999999999999999999999999999999999999999888888888889999999
Q ss_pred HHHhcCC-CcceeEeh
Q psy12877 675 LLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 675 ~~~~~~~-~sq~~y~e 689 (814)
+|+++|+ .+|+|+.|
T Consensus 316 al~~aGl~~~did~~e 331 (426)
T PRK08170 316 LLQRHGLTLEDLDLWE 331 (426)
T ss_pred HHHHcCCCHHHcCEEE
Confidence 9999999 58999998
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=405.16 Aligned_cols=310 Identities=51% Similarity=0.795 Sum_probs=260.8
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
+|+|||++||||+++.+.++++++.+|+.+++++||+|+||++++||.+++|++.+...++++++.+++.+|++.+.|.+
T Consensus 2 ~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~ 81 (394)
T PLN02644 2 DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICT 81 (394)
T ss_pred cEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceE
Confidence 69999999999999888888999999999999999999999999999999998765444566788899999998778999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae 536 (814)
+++++|+||..+|..|+++|++|++|+||++|+|+|++.|.... +.....+.....+......+..++....|++.|+
T Consensus 82 ~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 161 (394)
T PLN02644 82 TVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAE 161 (394)
T ss_pred EEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHH
Confidence 99999999999999999999999999999999999998764221 1001111100000111122222333446999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhc-CCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCC
Q psy12877 537 NTAKKFNISRDEQDEYALSSYKKSADAYKN-NVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENG 615 (814)
Q Consensus 537 ~~~~~~Gitre~~~~~a~~s~~~A~~a~p~-a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~ 615 (814)
+||++||+|||++|+|+++||+|+.+ |++ ++|++||+|+++.+++++++.+++.|+.++..+.+.|.++||+|.+..+
T Consensus 162 ~~~~~yG~tre~la~vav~s~~~a~~-a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g 240 (394)
T PLN02644 162 LCADQYSISREEQDAYAIQSYERAIA-AQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHH-hHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCC
Confidence 99999999999999999999999988 555 5899999999887766666566889999988899999999999975368
Q ss_pred ccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 616 plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+|++|||+++|||+++||+|++.|++++.+|+++|+|++...+.+..+..++..+++++|+++++ .+|++|.|
T Consensus 241 ~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~E 315 (394)
T PLN02644 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYYE 315 (394)
T ss_pred cEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999999999999999999999999999998999999988777766667888999999999999 58999987
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=402.01 Aligned_cols=274 Identities=18% Similarity=0.187 Sum_probs=226.7
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+.+.+++..+|+. .+|.+.|+.+|+||..++..|+++|++|.+|+|||+|+|+|+....... .... ...+..
T Consensus 67 ~~~a~~l~~~lG~~-~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~---~~~~--~~~~~~- 139 (392)
T PRK06065 67 HMKGEYLSHGSGGI-RKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQ---AVFR--YIWDPI- 139 (392)
T ss_pred ccHHHHHHHHcCCC-CCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchh---HHHh--hhccch-
Confidence 34777888999986 6899999999999999999999999999999999999999864311000 0000 000100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+.....+.....|++.++|||++||+++|+++++++++|+||..||++ ..|+++
T Consensus 140 ~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP~A--------------------------~~r~~l 193 (392)
T PRK06065 140 LEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNPYA--------------------------QLGSKI 193 (392)
T ss_pred hccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCchh--------------------------hhcCCC
Confidence 010111222335899999999999999999999999999999999887 234457
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC------CCCCCcHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP------IDFPIAPAFAI 244 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p------~~~~~~~~~a~ 244 (814)
|+|+++++|||. +|||++|||+++|||+|+||+|+|+|++++.+|+ +|.|++...+.. .....++..++
T Consensus 194 t~e~vl~s~~ia----~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~~~~~~~~~~~~~~~~~~~a~ 268 (392)
T PRK06065 194 TVEDVLKSEVLV----WPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTLDNTEWPNRDLAYPRYVEFAA 268 (392)
T ss_pred CHHHHhcCCccc----CCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCccccccccccccHHHHHHH
Confidence 999999999999 9999999999999999999999999999999996 899999854311 11233456799
Q ss_pred HHHHHHcCCCC--CCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHH
Q psy12877 245 PTLLKNGGVAK--QDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGAR 304 (814)
Q Consensus 245 ~~al~~aGl~~--~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~ 304 (814)
+++|+++|+++ +|||++|+||+|++++++++|+||||++ |+|++||+|+.|||+|+||++
T Consensus 269 ~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~ 348 (392)
T PRK06065 269 RMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLM 348 (392)
T ss_pred HHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHH
Confidence 99999999985 9999999999999999999999999986 999999999999999999999
Q ss_pred HHHHHHHHHHc--CCCCCcc
Q psy12877 305 IVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 305 ~l~e~v~qLr~--g~~gl~~ 322 (814)
+++|+++|||+ +.+|+..
T Consensus 349 ~~~e~~~QLrg~ag~rQv~~ 368 (392)
T PRK06065 349 KVISIYWQLKGTAGKMQVKK 368 (392)
T ss_pred HHHHHHHHHhccccCCcCCC
Confidence 99999999998 6777744
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=400.27 Aligned_cols=262 Identities=21% Similarity=0.245 Sum_probs=216.4
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCcc
Q psy12877 16 QAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLS 95 (814)
Q Consensus 16 ~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (814)
.++..+|+. ..|.+++ |+||..++.+|+++|++|.+|+|||.|+|+++....... ..+. ..+. .+....
T Consensus 69 ~~~~~lg~~-~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~----~~~~--~~~~-~~~~p~ 137 (385)
T PRK06066 69 FAPDQIGGA-MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSD----VVKF--AMDP-IYVRPI 137 (385)
T ss_pred hHHHHcccC-CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhh----hhhc--ccCc-ceeccc
Confidence 355678885 5788887 899999999999999999999999999999876311100 0000 0000 011111
Q ss_pred cccc-cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHh
Q psy12877 96 DVYN-KIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEK 174 (814)
Q Consensus 96 ~~~~-~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~ 174 (814)
.... ...+++.++|||++||+|+|+++++++++|+||.+||++- + |+++|+|+
T Consensus 138 g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~-~-------------------------r~~~t~ed 191 (385)
T PRK06066 138 GPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPRAS-Y-------------------------ASNISLED 191 (385)
T ss_pred CCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCChhh-c-------------------------CCCCCHHH
Confidence 1111 2246999999999999999999999999999999999982 2 34569999
Q ss_pred hhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC----CCCCCCCcHH--HHHHHHH
Q psy12877 175 FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----EPIDFPIAPA--FAIPTLL 248 (814)
Q Consensus 175 ~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~----~p~~~~~~~~--~a~~~al 248 (814)
++++||+. +|||++|||+++|||+|+||+|+++|++++.+|+ +|+|++...+ .+..+...+. .|++++|
T Consensus 192 vl~S~~ia----~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~ 266 (385)
T PRK06066 192 VLSSEYVV----YPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAY 266 (385)
T ss_pred HhcCCccc----CCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999999999998 9999998543 3444444454 6999999
Q ss_pred HHcCCC--CCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHHHHHH
Q psy12877 249 KNGGVA--KQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGARIVIH 308 (814)
Q Consensus 249 ~~aGl~--~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~~l~e 308 (814)
+++||+ ++|||++|+||+|++++++++|+||||++ |||++||+|+.|||+|+||+++++|
T Consensus 267 ~~AGi~~p~~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e 346 (385)
T PRK06066 267 KMAGIESPRKEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLD 346 (385)
T ss_pred HHcCCCCCHHHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHH
Confidence 999998 79999999999999999999999999984 7999999999999999999999999
Q ss_pred HHHHHHc--CCCC
Q psy12877 309 LCHALKS--GQKG 319 (814)
Q Consensus 309 ~v~qLr~--g~~g 319 (814)
+++|||+ +.+|
T Consensus 347 ~~~QL~g~Ag~rQ 359 (385)
T PRK06066 347 AVEYLRGEAGARQ 359 (385)
T ss_pred HHHHHcccccccC
Confidence 9999998 5666
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=403.30 Aligned_cols=305 Identities=28% Similarity=0.429 Sum_probs=251.9
Q ss_pred CCCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCC
Q psy12877 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 375 ~~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~ 454 (814)
+.|++|+|||++||||+++.|.+++.++.||+.+|++++|+|+||++++||.+++|++.+...+.++++..++..|++..
T Consensus 4 ~~m~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~ 83 (427)
T PRK09268 4 PTVRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPY 83 (427)
T ss_pred CCCCCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCC
Confidence 34578999999999999988889999999999999999999999999999999999987654456789999899899867
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCc-------c---CCCC-cc---cccccc-c
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGE-------T---KYGG-MN---LIDGIV-Y 519 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~-------~---~~~~-~~---~~~~~~-~ 519 (814)
+|.++|+++|+||+.++..|+++|++|.+|++|++|+|+||+.|+...... . ..+. +. ...... .
T Consensus 84 ~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (427)
T PRK09268 84 TPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLA 163 (427)
T ss_pred CceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccccccc
Confidence 899999999999999999999999999999999999999998875322100 0 0000 00 000000 0
Q ss_pred ---cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc
Q psy12877 520 ---DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 596 (814)
Q Consensus 520 ---~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~ 596 (814)
+...+.+....|+.++++||++||+|||+||+||++||+||.+++..++|++||.|+. + +++|+.+|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~-----~-----~~~D~~~r 233 (427)
T PRK09268 164 PEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL-----G-----LTRDNNLR 233 (427)
T ss_pred ccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc-----C-----cccCCCCC
Confidence 1111122345699999999999999999999999999999999999999999999883 1 67899998
Q ss_pred -cCCHHHhhcccccccc-CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC----CCCCchHHh
Q psy12877 597 -KINFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP----IDFPIAPAF 670 (814)
Q Consensus 597 -~~~~e~l~~~~p~f~~-~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p----~~~~~g~~~ 670 (814)
++|+|+|.++||+|.+ ++++||++|||+++|||+|+||+|+|+|++++.+|+++|..+...+.+| ..+..++..
T Consensus 234 ~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~ 313 (427)
T PRK09268 234 PDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAY 313 (427)
T ss_pred CCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHH
Confidence 6999999999999963 1367999999999999999999999999999999986774444444444 446678889
Q ss_pred HHHHHHHhcCC-CcceeEeh
Q psy12877 671 AIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 671 A~~~~~~~~~~-~sq~~y~e 689 (814)
|++++|+++|+ .+|+++.|
T Consensus 314 a~~~a~~~AGl~~~Did~~E 333 (427)
T PRK09268 314 AVPRLLARNGLTLQDFDFYE 333 (427)
T ss_pred HHHHHHHHcCCCHHHCCEEE
Confidence 99999999999 58888887
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=403.19 Aligned_cols=269 Identities=22% Similarity=0.282 Sum_probs=218.8
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCcc
Q psy12877 16 QAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLS 95 (814)
Q Consensus 16 ~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (814)
.+...+|+. .+|+++|+++|+||+.+|..|+++|++|++|+|||+|.|+||..|...... ...+ ... ...... ..
T Consensus 66 ~~~~~~gl~-~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~-~~~~-~~~-~~~~~~-~~ 140 (389)
T PRK07516 66 VLQADPALR-FKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGD-ILLG-ASY-LKEEGD-TP 140 (389)
T ss_pred HHHHhcCCC-CCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHH-Hhhh-ccc-cccccc-cC
Confidence 344556776 789999999999999999999999999999999999999999876421100 0000 000 000000 00
Q ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHh-
Q psy12877 96 DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEK- 174 (814)
Q Consensus 96 ~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~- 174 (814)
..+ ...|++.+++||++||++||++++|++++|+||..||.+ +++ +++|+|+
T Consensus 141 ~~~-~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~nP~A-~~~-------------------------~~~t~~~~ 193 (389)
T PRK07516 141 GGF-AGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYA-QMR-------------------------KDLGFEFC 193 (389)
T ss_pred CCc-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcCChh-hcC-------------------------CcccHHhh
Confidence 111 125999999999999999999999999999999998876 222 2346654
Q ss_pred ---hhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-------CCCCCCCcHHHHH
Q psy12877 175 ---FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-------EPIDFPIAPAFAI 244 (814)
Q Consensus 175 ---~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-------~p~~~~~~~~~a~ 244 (814)
+.+++++. +|+|++|||+++|||+|+||+|+++|++++ +| ++|.|++...+ ++. ...++..++
T Consensus 194 ~~~~~~~~~i~----~pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~ 266 (389)
T PRK07516 194 RTVSEKNPLVA----GPLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRFRARAHVNDFLPLSRRDPL-AFEGPRRAW 266 (389)
T ss_pred hhhhhcCCccc----CCCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEEEEEEeccCcccccCCCcc-ccHHHHHHH
Confidence 67888888 899999999999999999999999999994 55 59999998743 222 235667899
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHHHH
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGARIV 306 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~~l 306 (814)
+++|+++||+++|||++|+||+|++++++++|+||||++ |||++||++++|||+|+||++++
T Consensus 267 ~~a~~~agl~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~ 346 (389)
T PRK07516 267 QRALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMH 346 (389)
T ss_pred HHHHHHcCCCHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHH
Confidence 999999999999999999999999999999999999987 99999999999999999999999
Q ss_pred HHHHHHHHc--CCCCCccc
Q psy12877 307 IHLCHALKS--GQKGQLSQ 323 (814)
Q Consensus 307 ~e~v~qLr~--g~~gl~~~ 323 (814)
+|+++|||+ +.+|+...
T Consensus 347 ~e~~~QL~g~ag~rQv~~a 365 (389)
T PRK07516 347 VLAAMQLTGEAGGMQIPGA 365 (389)
T ss_pred HHHHHHhcCCccCCcCCch
Confidence 999999998 77887553
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=401.36 Aligned_cols=275 Identities=22% Similarity=0.303 Sum_probs=230.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc-cCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~-~~~~~~~~~~~~~~ 88 (814)
.+++++.++..+|++ .+|.++++++|+||+.+|.+|+++|++|++|+|||+|.|++|..+.... +...... +.
T Consensus 60 ~~~~a~~va~~lGl~-~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~-----~~ 133 (389)
T PRK06064 60 QEHIAALIADYAGLA-PIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAG-----DY 133 (389)
T ss_pred cccHHHHHHHHcCCC-CCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhccc-----cc
Confidence 367899999999997 7999999999999999999999999999999999999999987663110 0000000 00
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.++.+........|++.+++||++||+|||+++++++++|+||.+||++ ++ |+
T Consensus 134 -~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a-~~-------------------------~~ 186 (389)
T PRK06064 134 -EWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSKNPYA-QF-------------------------QK 186 (389)
T ss_pred -ccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHh-hh-------------------------CC
Confidence 0111111111236899999999999999999999999999999999885 33 33
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC------CC-CCCcHH
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP------ID-FPIAPA 241 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p------~~-~~~~~~ 241 (814)
++|+|+++++||++ +|+|++|||+++|||+|+||+|+++|++++.+|+ +|+|++...+.+ +. ...++.
T Consensus 187 ~~t~~~~~~s~~i~----~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T PRK06064 187 EITVEQVLNSPPVA----DPLKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAV 261 (389)
T ss_pred CCCHHHHhcCCccc----CCCchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHH
Confidence 46999999999999 8999999999999999999999999999988886 999999876533 11 234556
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHH
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~ 303 (814)
.+++++|+++||+++|||++|+||+|+.++++++|+||||++ |||++||+|++|||+|++|+
T Consensus 262 ~a~~~al~~aGi~~~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~ 341 (389)
T PRK06064 262 VAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGV 341 (389)
T ss_pred HHHHHHHHHcCCCHHHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHH
Confidence 899999999999999999999999999999999999999874 99999999999999999999
Q ss_pred HHHHHHHHHHHc-C---CCCCcc
Q psy12877 304 RIVIHLCHALKS-G---QKGQLS 322 (814)
Q Consensus 304 ~~l~e~v~qLr~-g---~~gl~~ 322 (814)
++++|+++||++ . .+|+..
T Consensus 342 ~~~~e~~~qL~g~a~~g~rqv~~ 364 (389)
T PRK06064 342 SQAVEIVWQLRGEAEKGRQQVIG 364 (389)
T ss_pred HHHHHHHHHHhCCCCCCCccCCC
Confidence 999999999997 3 466655
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-44 Score=397.96 Aligned_cols=268 Identities=19% Similarity=0.167 Sum_probs=227.8
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
+++..++..+|+. ..|++.++.+|+||..++..|+++|++|.+|+|||+|+|+++....... .. .+. .+
T Consensus 63 ~~~~~va~~LGl~-~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~-----~~----~~~-~~ 131 (386)
T PRK08313 63 MPELFLADALGAT-GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWA-----LS----IPV-PF 131 (386)
T ss_pred CchHHHHHhcCCC-CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccc-----cc----ccc-cc
Confidence 5667888999996 7899999999999999999999999999999999999999876421110 00 000 01
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC-C
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-I 170 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~-~ 170 (814)
........+..|++.+++||++||+++|+++++++++|+||.+||++ +.|++ +
T Consensus 132 ~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A--------------------------~~r~~~~ 185 (386)
T PRK08313 132 TKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYA--------------------------HLHQPDI 185 (386)
T ss_pred ccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHH--------------------------hcCCCCC
Confidence 11112223456899999999999999999999999999999999887 22333 7
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC-------CCCCcHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI-------DFPIAPAFA 243 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~-------~~~~~~~~a 243 (814)
|+|+++++||++ +|+|++|||+++|||+|+||+|+++|++++.+|.+||+|++...+ +. ....++..+
T Consensus 186 t~e~v~~s~~ia----~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~-~~~~~~~~~~~~~~~~~a 260 (386)
T PRK08313 186 TLEKVMASQMLW----DPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTE-PLAFAGRDQVNPQAGRDA 260 (386)
T ss_pred CHHHHhcCCccc----CCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEec-CcccccccccccHHHHHH
Confidence 999999999999 899999999999999999999999999998888889999998643 32 223456789
Q ss_pred HHHHHHHcCCC--CCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHH
Q psy12877 244 IPTLLKNGGVA--KQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 244 ~~~al~~aGl~--~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~ 303 (814)
++++|+++|++ ++|||++|+||||++++++++|+||||++ |||++||+|+ |||.|+||+
T Consensus 261 ~~~a~~~Agi~~p~~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~ 339 (386)
T PRK08313 261 AAALWKAAGITDPRDEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGM 339 (386)
T ss_pred HHHHHHHcCCCCChhhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHH
Confidence 99999999998 79999999999999999999999999988 9999999999 999999999
Q ss_pred HHHHHHHHHHHc--CCCCCcc
Q psy12877 304 RIVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 304 ~~l~e~v~qLr~--g~~gl~~ 322 (814)
.+++|+++|||+ +.+|+..
T Consensus 340 ~~~~e~~~qlrG~ag~rQv~~ 360 (386)
T PRK08313 340 IRFAEAALQVMGKAGEHQVDG 360 (386)
T ss_pred HHHHHHHHHhcccccCCcCCC
Confidence 999999999998 6677754
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=398.45 Aligned_cols=269 Identities=18% Similarity=0.221 Sum_probs=223.4
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEE-eeccCCCCCCccccCcccCCCCccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAG-GMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~-G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+...++..+|++ ..|.+.++.+|+|+..++..|+++|++|.+|+|||+ |.|+++.... ... .. ....
T Consensus 62 ~~~~~la~~lGl~-~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~-~~~---~~------~~~~ 130 (384)
T PRK06158 62 LWGLSVAEYLGIR-PRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGK-LRS---ML------DPQP 130 (384)
T ss_pred CcHHHHHHHcCCC-CeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCccc-ccc---cc------cccc
Confidence 3456688889997 678899999999999999999999999999999985 7887663210 000 00 0000
Q ss_pred ccCccc-ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 91 YDGLSD-VYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 91 ~~~~~~-~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+..... ......|++.+++||++||+|+|+++++++++|+||..||++ +.|++
T Consensus 131 ~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A--------------------------~~~~~ 184 (384)
T PRK06158 131 YEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEA--------------------------FMRDP 184 (384)
T ss_pred hhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchh--------------------------hhCCC
Confidence 111111 112345899999999999999999999999999999988876 33456
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC------CCCCCCcHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE------PIDFPIAPAFA 243 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~------p~~~~~~~~~a 243 (814)
+|+|+++++||+. +|+|++|||+++|||+|+||+|+++|++++.+|+ +|.|++...+. +.........+
T Consensus 185 ~t~e~vl~s~~ia----~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v-~i~g~~~~~~~~~~~~~~~~~~~~~~~a 259 (384)
T PRK06158 185 LTIDDVLAARMVS----DPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPV-YVLGAAAATWHRQISSMPDLTVTAAAES 259 (384)
T ss_pred CCHHHHhcCCccC----CCCchhhcCCccCCeEEEEEecHHHHhhcCCCcE-EEEEEEEecCCcccccccchhhhHHHHH
Confidence 7999999999999 9999999999999999999999999999998885 99999976431 22223445679
Q ss_pred HHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHHH
Q psy12877 244 IPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGARI 305 (814)
Q Consensus 244 ~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~~ 305 (814)
++++|+++|++++|||++|+||||++.+++++|+||||++ |+|++||+++.||| |+||+++
T Consensus 260 a~~A~~~AGi~p~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~ 338 (384)
T PRK06158 260 GPRAFAMAGLTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFL 338 (384)
T ss_pred HHHHHHHcCCCHHHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHH
Confidence 9999999999999999999999999999999999999987 99999999999999 9999999
Q ss_pred HHHHHHHHHc--CCCCCccc
Q psy12877 306 VIHLCHALKS--GQKGQLSQ 323 (814)
Q Consensus 306 l~e~v~qLr~--g~~gl~~~ 323 (814)
++|+++|||+ +.+|+...
T Consensus 339 ~~E~~~QLrg~ag~rQv~~a 358 (384)
T PRK06158 339 LIEAVRQLRGEAGERQVAGA 358 (384)
T ss_pred HHHHHHHHcCCCCCCcCCCC
Confidence 9999999998 77887553
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=394.77 Aligned_cols=274 Identities=14% Similarity=0.168 Sum_probs=224.2
Q ss_pred HHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCc
Q psy12877 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGL 94 (814)
Q Consensus 15 r~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (814)
..++..+|+. ..|...++.+|+|+..++.+|+++|++|.+|+|||+|+|+++....... ....+..... + ..+...
T Consensus 62 ~~~~~~lGl~-~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~ 137 (388)
T PRK08142 62 ASMVDYLGLK-LRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGT-EPRNWGADAP-D-APFEAP 137 (388)
T ss_pred HHHHHhCCCC-CeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCcccc-cccccccccc-c-cchhcc
Confidence 3488899996 7899999999999999999999999999999999999999754221000 0000100000 0 001111
Q ss_pred ccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHh
Q psy12877 95 SDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEK 174 (814)
Q Consensus 95 ~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~ 174 (814)
........+++.+++||++||+|+|+++++++++|+||..||++ + .|+++|+|+
T Consensus 138 ~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A-~-------------------------~r~~~t~e~ 191 (388)
T PRK08142 138 YGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHA-M-------------------------LRDVVTVED 191 (388)
T ss_pred cccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCChh-h-------------------------cCCCCCHHH
Confidence 11222346899999999999999999999999999999999887 2 344569999
Q ss_pred hhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHHHHH
Q psy12877 175 FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLK 249 (814)
Q Consensus 175 ~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~ 249 (814)
++++|||. +|+|+++||+++|||+|+||+|+++|++++.+| ++|.|++...+ .++.....+..+++++|+
T Consensus 192 vl~s~~Ia----~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~ 266 (388)
T PRK08142 192 VLNSPMIA----DPLHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFA 266 (388)
T ss_pred HhcCCccc----CCchhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999998666 59999998643 233333455679999999
Q ss_pred HcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC-------------------CcccCCCCccccCCCCChHHHHHHHHH
Q psy12877 250 NGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS-------------------KVNVHGGAVSLGHPIGMSGARIVIHLC 310 (814)
Q Consensus 250 ~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~-------------------~vN~~GG~la~Ghp~gasG~~~l~e~v 310 (814)
++|++++|||++|+||||++.+++++|+||||++ |+|++||+++.|||+|+||+++++|++
T Consensus 267 ~AGi~~~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~ 346 (388)
T PRK08142 267 EAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAV 346 (388)
T ss_pred HcCCCHHHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHH
Confidence 9999999999999999999999999999999875 899999999999999999999999999
Q ss_pred HHHHc--C-CCCCccc
Q psy12877 311 HALKS--G-QKGQLSQ 323 (814)
Q Consensus 311 ~qLr~--g-~~gl~~~ 323 (814)
+|||+ + ++|+...
T Consensus 347 ~QLrG~ag~~rQV~~a 362 (388)
T PRK08142 347 RQLRGEAHPAVQVPNC 362 (388)
T ss_pred HHHcCCCCCCCCCCCC
Confidence 99997 3 4677553
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=388.22 Aligned_cols=278 Identities=32% Similarity=0.501 Sum_probs=244.5
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
+|+|||++||||+++.|.++++++.+|+..|++++++ ||+ ++||.+++|++.+. +.+++|.+++.+|++..+|.+
T Consensus 2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~ 76 (361)
T PRK06690 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV 76 (361)
T ss_pred cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence 5999999999999999999999999999999999854 996 89999999998543 467888899999998789999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+|+++|+||+.+|..|++.|++|++|++|++|+|+||+.|+.. + ..+.. +. .....|+++|++|
T Consensus 77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~-~--~~~~~---------~~----~~~~~~~~~a~~~ 140 (361)
T PRK06690 77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQN-R--ARFSP---------ET----IGDPDMGVAAEYV 140 (361)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCccc-c--cccCc---------cc----ccCccHHHHHHHH
Confidence 9999999999999999999999999999999999999887521 1 00000 00 1112499999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHh-hccccccccCCCc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKF-KSLATVFQKENGT 616 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l-~~~~p~f~~~~~p 616 (814)
|++||+|||+||+||..||+|+.++..+++|++||+|++ + ++ |+.+| .+++|++ .+|||+|.+ ++|
T Consensus 141 ~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~-----~-----~~-d~~~r~~~~~e~ll~~l~p~~~~-~g~ 208 (361)
T PRK06690 141 AERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN-----G-----LL-DESIKKEMNYERIIKRTKPAFLH-NGT 208 (361)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc-----C-----cc-ccccCCCCCHHHHhhcCCCcccC-CCc
Confidence 999999999999999999999999999999999998875 1 45 88887 5899998 999999975 689
Q ss_pred cccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 617 lt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
||++|||+++|||+|+||+|+|+|++++.+|+++|+|++..+.+|..+..++..+++++|+++++ ..|++++|
T Consensus 209 lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~e 282 (361)
T PRK06690 209 VTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFE 282 (361)
T ss_pred eeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEee
Confidence 99999999999999999999999999999998899999988888888888999999999999999 47888886
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=390.58 Aligned_cols=299 Identities=29% Similarity=0.434 Sum_probs=243.9
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCC-CCChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG-LGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~-~~~~~a~~~a~~~Gl~~~~ 455 (814)
|++|+|||+++|||+++.+.++++++.+|+.+|+++||+|+||++++||.+++|+..... ...++++...+..|++...
T Consensus 1 M~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 1 MAEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CCceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 367999999999999988888889999999999999999999999999999999764322 2355788777888997668
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC-CCccCCCCcccccccccccccccc--ccccHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVY--NKIHMG 532 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~mg 532 (814)
|.++++++|+||+.+|..|+++|++|++|+||++|+|+|++.|+... +....++....... ...+..++ ....|+
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~ 158 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAE--SKGWLHRYGDQEVSQF 158 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCccccc--CcchhhhccCCCCCHH
Confidence 99999999999999999999999999999999999999987664111 10000010000000 00011111 123455
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcC-CccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNN-VFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a-~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
..+++||++||+|||+||+|+++||+||.. ||.+ +|+++++|+. .++.|+.+|.+|+|++.++||++.
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~-n~~ag~~~~~~~p~~----------~~~~d~~~~~~t~e~~~~~~~i~~ 227 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFA-AIRAGRFDNEIVPVG----------GVTVDEGPRETSLEKMAGLKPLVE 227 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHH-HHHcCCCcccccccc----------CccccCCcCcCCHHHHhcCCCCCC
Confidence 579999999999999999999999999999 7765 8988877764 257899999999999999999984
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
.+|||++|||+++|||+|+||+|+|+|++++.+|.+||+|++...++|..+..++..|++++|+++++ .+|+|+.|-
T Consensus 228 --~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~~e~ 305 (382)
T PRK07801 228 --GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEI 305 (382)
T ss_pred --CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCEeee
Confidence 47999999999999999999999999999999888899999887777655667888999999999999 588998863
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=373.55 Aligned_cols=260 Identities=17% Similarity=0.140 Sum_probs=210.6
Q ss_pred HHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCccc
Q psy12877 17 AVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSD 96 (814)
Q Consensus 17 ~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (814)
.....|+...+|...++ ++|..++.+|+++|++|.+|+|||.|+|+++.... ... ... ..+.. +.....
T Consensus 67 ~~~~~G~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~--~~~---~~~--~~~~~-~~~p~G 135 (352)
T PRK07937 67 AIDSIGAVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTL--RRV---LAL--QLDPY-TVAPLW 135 (352)
T ss_pred HHhhccCCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccch--hhh---hhc--cCCcc-eeccCC
Confidence 44557774356777776 46888999999999999999999999999864111 000 000 00110 000011
Q ss_pred ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHhhh
Q psy12877 97 VYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFK 176 (814)
Q Consensus 97 ~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~ 176 (814)
......|++.+++||++||+|+|+++++++++|+||..||++- .| +|+|+++
T Consensus 136 ~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~--------------------------~r--it~edvl 187 (352)
T PRK07937 136 PDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAE--------------------------PS--ISVDELL 187 (352)
T ss_pred CchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhh--------------------------cc--CCHHHHh
Confidence 1123468999999999999999999999999999999998872 23 6999999
Q ss_pred cCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC---CcHHHHHHHHHHHc-C
Q psy12877 177 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP---IAPAFAIPTLLKNG-G 252 (814)
Q Consensus 177 ~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~---~~~~~a~~~al~~a-G 252 (814)
++||+. +|||++|||+++|||+|+||+|+++|++++.+| ++|.|++...+.+ .+. ..+..+++++++++ |
T Consensus 188 ~s~~ia----~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~-~~~~~d~~~~~~~~~a~~~aAg 261 (352)
T PRK07937 188 ARPYFA----DPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESP-SLGARDLTRSPSTALAAEAATG 261 (352)
T ss_pred cCCccc----CCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCc-cccccccccHHHHHHHHHHhcC
Confidence 999999 999999999999999999999999999999999 5999999965432 222 44566778888886 9
Q ss_pred CCCCCccEEecCCCchHHHHHHhhhcCCCCC-CcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCCCCcc
Q psy12877 253 VAKQDVALWEINEAFSVVVLANIKKLDIDPS-KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 253 l~~~DID~~e~~d~fa~~~l~~~e~lg~~~~-~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~ 322 (814)
++++|||++|+||+|++++++++|+|||+.+ |+|++||+|+ |||+|+||+++++|+++||++ .++++++
T Consensus 262 i~~~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~~a~~~l~~ 333 (352)
T PRK07937 262 GDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDGSARRALAH 333 (352)
T ss_pred CCHHHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhccCCCEEEEe
Confidence 9999999999999999999999999999885 9999999999 999999999999999999997 4555555
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=378.57 Aligned_cols=306 Identities=46% Similarity=0.692 Sum_probs=252.0
Q ss_pred EeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC
Q psy12877 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN 461 (814)
Q Consensus 382 IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~ 461 (814)
|||+++|||+++.|.+++.+..+|+.+|+++||+|+||+++|||.+++|+..+....+..++.++..+|++...|.++++
T Consensus 1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~ 80 (386)
T TIGR01930 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN 80 (386)
T ss_pred CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence 79999999999888888899999999999999999999999999999998765544466788899999997557999999
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC---CccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 462 KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR---GETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 462 ~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
.+|+||..+|..|+++|++|.+|+||++|+|+|++.+..... .....+...........++..++....|++.+++|
T Consensus 81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y 160 (386)
T TIGR01930 81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENL 160 (386)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHH
Confidence 999999999999999999999999999999999876642211 11111111000001112222333345799999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCCCcc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTV 617 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~~pl 617 (814)
|++||+|||+|++|++++|+||..++.++.++++|+|..+.++.+ .+++++|+..| ++|+|++.++||++.+ .+.|
T Consensus 161 ~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~--~~~~~~da~~r~~~t~e~v~~s~~i~~P-~~~l 237 (386)
T TIGR01930 161 AKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKG--PVTVSTDEGIRPNTTLEKLAKLKPAFDP-NGTV 237 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCC--CeEeCCCCCCCCCCCHHHHhCCCCCcCC-CCee
Confidence 999999999999999999999999557799999999986644322 35678888887 6999999999999631 1229
Q ss_pred ccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 618 TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 618 t~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
|++|||+++|||+|+||+|+|.|++++.+|++||.|++..+.+|..+..++..|++++|+++|+ .+|+||.|-
T Consensus 238 ~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~ 311 (386)
T TIGR01930 238 TAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEI 311 (386)
T ss_pred eCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeeh
Confidence 9999999999999999999999999999999999999998877777777888999999999999 479999863
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=378.23 Aligned_cols=306 Identities=47% Similarity=0.743 Sum_probs=252.4
Q ss_pred eEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe
Q psy12877 381 FIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV 460 (814)
Q Consensus 381 ~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv 460 (814)
+|||++||||+++.+.+++.+..+|+.+|+++||+|+||+++|||.+++|+..+...++..++.++..+|++...|.+++
T Consensus 1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v 80 (386)
T cd00751 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV 80 (386)
T ss_pred CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence 69999999999988888889999999999999999999999999999999876655566778889999999755789999
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCcc-CCCCccccccccccccccccccccHHHHHHHHH
Q psy12877 461 NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGET-KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539 (814)
Q Consensus 461 ~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~ 539 (814)
+.+|+||+.+|..|+++|++|.+|+||++|+|+|++.+........ ............+.++..+.....|++.+++||
T Consensus 81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~ 160 (386)
T cd00751 81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVA 160 (386)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999877643221110 000000000011122223333456899999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCCCccc
Q psy12877 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 540 ~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~~plt 618 (814)
++||+|||++|+|++++|+||..+...+.+.+++.|+++++.+ ...+++.|+..| ++|+|++.++||++.+ .+|||
T Consensus 161 ~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~a~~r~~~t~e~v~~s~~i~~p-~g~l~ 237 (386)
T cd00751 161 EKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRK--GPVVVDRDEGPRPDTTLEKLAKLKPAFKK-DGTVT 237 (386)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCC--CCeEeCCCCCCCCCCCHHHHhCCCCCcCC-CCcEe
Confidence 9999999999999999999998732335566888899876532 234678888887 5999999999999864 46799
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
++|||+++|||+++||+|+++|++++.+|+++|+|++...+++..+..++..+++++|+++++ .+|++|.|
T Consensus 238 ~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e 309 (386)
T cd00751 238 AGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIE 309 (386)
T ss_pred CCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence 999999999999999999999999999999999999998888877778889999999999999 57899987
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=374.65 Aligned_cols=290 Identities=14% Similarity=0.132 Sum_probs=221.7
Q ss_pred HHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeec--cCCCCCCccccCcccCCC-Ccccccccc
Q psy12877 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGME--SMSNVPFYLNRGETKYGG-MNLIDGIVY 91 (814)
Q Consensus 15 r~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e--~~s~~~~~~~~~~~~~~~-~~~~~~~~~ 91 (814)
..++..+|+....|..+++.+|+|+..++..|+++|++|.+|+|||.|.. .... ............. ....+. .+
T Consensus 60 ~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 137 (386)
T PRK07855 60 IAVARALGIGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGM-RFGQGQTGLAENPTSTGVDY-GW 137 (386)
T ss_pred HHHHHHCCCCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeeccccccc-ccccccccccccccccccch-hh
Confidence 56888899973367789999999999999999999999999999999983 2110 1000000000000 000000 00
Q ss_pred cCcccc-cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 92 DGLSDV-YNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 92 ~~~~~~-~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
...... .....+++.+++||++||+|+|+++++++++|+||.+||.+-++ |+++
T Consensus 138 ~~~~g~~~~~~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~-------------------------~~~~ 192 (386)
T PRK07855 138 SYPHGLLTPAAWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFY-------------------------GRPI 192 (386)
T ss_pred hhhcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhc-------------------------CCCC
Confidence 111111 11235899999999999999999999999999999999988322 2356
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC---------CCCC--Cc
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP---------IDFP--IA 239 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p---------~~~~--~~ 239 (814)
|+|+++++|||. +|+|++|||+++|||+|+||+|+++|++++.+|+ ||.|++...... .++. ..
T Consensus 193 t~e~vl~s~~Ia----~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~~~~~~~~~~~~~~d~~~~~~ 267 (386)
T PRK07855 193 TLEDHQNSRWIA----EPLRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGSGADQYMMTSYYRDDITGLPE 267 (386)
T ss_pred CHHHHhcCCccc----CCchhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEecCCccccccccccccccccch
Confidence 999999999999 9999999999999999999999999999999997 999999854211 1111 12
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCCh
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMS 301 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gas 301 (814)
...+++++|+++||+++|||++|+||||++++++++|+||||++ |+|++||+++.|||.
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~--- 344 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH--- 344 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---
Confidence 23699999999999999999999999999999999999999986 899999999999986
Q ss_pred HHHHHHHHHHHHHc-CCCCCccccccCccccccccceeEEecCCcceeEE
Q psy12877 302 GARIVIHLCHALKS-GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIAL 350 (814)
Q Consensus 302 G~~~l~e~v~qLr~-g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~l 350 (814)
|+.+++|+++|||+ +.+|+... ...++++.||..++.+
T Consensus 345 G~~~i~E~~~QLrG~a~~QV~~a-----------~~gl~~~~Gg~~~~~~ 383 (386)
T PRK07855 345 GMNGIAEAVRQLRGTSVNQVPGV-----------ENVLVTAGTGVPTSGL 383 (386)
T ss_pred hHHHHHHHHHHHhCCCcccCCCC-----------cEEEEECCCCccceeE
Confidence 89999999999998 44566543 2344555566554433
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=369.84 Aligned_cols=305 Identities=30% Similarity=0.429 Sum_probs=250.4
Q ss_pred CceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCC
Q psy12877 378 GDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dA-Gl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~ 454 (814)
++|+|||++||||+++ .|.++++++.+|+.+|+++||+|+ ||+++|||.+++|+..+... +.+.++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 5799999999999984 688889999999999999999997 99999999999997654322 456788999999996 5
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCc---c-------c---cccccccc
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGM---N-------L---IDGIVYDG 521 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~---~-------~---~~~~~~~~ 521 (814)
+|.++++++|+||..++..|+++|++|.+|+|||+|+|+|+..+..........+.. . . .+..+...
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDP 160 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccc
Confidence 899999999999999999999999999999999999999987652111100000000 0 0 00000011
Q ss_pred c---ccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-c
Q psy12877 522 L---SDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-K 597 (814)
Q Consensus 522 ~---~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~ 597 (814)
+ ..+.....||+.+++|+++||++||++++|++++|+++..+..+..+..++.|+..++. +.+++|+.+| +
T Consensus 161 ~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~-----~~~~~d~~~r~~ 235 (406)
T PRK07851 161 REDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPRAG 235 (406)
T ss_pred ccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCC-----ceeCCCCCccCC
Confidence 1 01112356899999999999999999999999999999988888889988889876552 3567888887 6
Q ss_pred CCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHH
Q psy12877 598 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677 (814)
Q Consensus 598 ~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~ 677 (814)
+|+|++.++||++.+ .+.||++|||+++|||+|+||+|+|+|++++.+|++||+|++.....|..+..++..|++++|+
T Consensus 236 ~t~e~v~~s~~v~~P-~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~ 314 (406)
T PRK07851 236 TTYEKVSQLKPVFRP-DGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALA 314 (406)
T ss_pred cCHHHHhcCCCccCC-CCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHHHHH
Confidence 999999999999742 3449999999999999999999999999999999999999999888777777788899999999
Q ss_pred hcCC-CcceeEeh
Q psy12877 678 NGGQ-LSQFWYDE 689 (814)
Q Consensus 678 ~~~~-~sq~~y~e 689 (814)
++++ ..||||.|
T Consensus 315 ~Agi~~~did~~e 327 (406)
T PRK07851 315 RAGMSIDDIDLVE 327 (406)
T ss_pred HhCCCHHHCCeeh
Confidence 9999 57899997
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=372.76 Aligned_cols=326 Identities=38% Similarity=0.526 Sum_probs=269.5
Q ss_pred CCceeEeceeecccccCC-CCCCCCCHHHHHHHHHHHHHHHc--CCCCcCcceEEEEecccCC-CCChHHHHHHHHcCCC
Q psy12877 377 PGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQKA--NMDKSDVQEVYMGNVCQAG-LGQAPCRQAVIFAGLP 452 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~-g~~~~~~~~eLa~~A~~~AL~dA--Gl~~~dID~vivG~~~~~~-~~~~~a~~~a~~~Gl~ 452 (814)
|++|+|+|++||||+++. ++++++.+.+|...+.++.+++. +|++.+||.+++|++.+.+ .+++++|.+++.+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 468999999999999996 88888888888888888887643 6888889999999988875 4778999999999999
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
..+|.++|+++|+||++|+..|+++|++|.+|+||++|+|+||+.|+. +........ ..+.+..+.+.......+|+
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~--~~~~~~~~~-~~d~~~~~~~~~~~~~~~~g 157 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG--REGVRVLDS-AVDPMFEDPLGDATPGYLMG 157 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCcc--ccchhhhhh-hhhhccccccccccchhHHH
Confidence 779999999999999999999999999999999999999999999863 111111111 12233334444455567899
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-c--CCHHHhhccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-K--INFEKFKSLATV 609 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~--~~~e~l~~~~p~ 609 (814)
++|++||++||+|||+||+|+++||+||.+ ||+++|++||+|+++. ++ .+..|+.+| + .+.|.+.+++|.
T Consensus 158 ~~A~~~~~~yGitre~~d~~Av~sh~~A~~-np~a~~~~eI~~~~v~---~~---~~~~dp~~r~d~~~~~dg~a~l~~a 230 (392)
T COG0183 158 LTAERYAKRYGISREDQDEVAVKSHKNAAA-NPKAGFFDEITPEDVL---NS---PVVADPLRRLDCSPTSDGAAALVPA 230 (392)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHh-hHhcCCCCceeeEEec---CC---ceecCCcccCCCCCChhhhcCceec
Confidence 999999999999999999999999999999 9998888888776654 33 346788888 6 899999999999
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC--CcceeE
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ--LSQFWY 687 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~--~sq~~y 687 (814)
|.+.++.+|.+|.|+++||++++++++++.+++++++|++++++|.+++.+|..| .+|+.+++++|+..++ +.++++
T Consensus 231 ~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlgl 309 (392)
T COG0183 231 FEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLGL 309 (392)
T ss_pred cccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcCc
Confidence 9752269999999999999999999999999999999999999999999999998 8999999999999987 488999
Q ss_pred ehhhhhh----------chHHHHhccCCCCeEEEEecCc
Q psy12877 688 DENTTQR----------LSEEAVCRAGKEGSIALISCPT 716 (814)
Q Consensus 688 ~e~t~~~----------l~~~~~~~~~~~g~iA~~s~ps 716 (814)
+|.=-.. +-.+.+| ++||.||+ ..|-
T Consensus 310 ~e~nEafa~~~~~~~~~~G~~~VN--~~GGaiA~-GHPi 345 (392)
T COG0183 310 AEKGEAFAAVALGVTKILGDLPVN--PSGGAIAL-GHPI 345 (392)
T ss_pred eecChHHHHHHHhhHHhcCCceeC--CCcchhhc-CCCc
Confidence 8632111 1112455 78888874 3443
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=370.60 Aligned_cols=279 Identities=16% Similarity=0.140 Sum_probs=220.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccC-cccCCC---C--
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG-ETKYGG---M-- 83 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~-~~~~~~---~-- 83 (814)
..++++.++..+|+. ..+......+|+|+..++.+|+++|++|++|+|||+|+|+++..+...... ...+.. .
T Consensus 64 ~~~~~~~la~~lGl~-p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (498)
T PRK08257 64 YRDPPGLLAERLGAD-PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPL 142 (498)
T ss_pred ccCHHHHHHHHcCCC-CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccc
Confidence 346789999999996 566667778888999999999999999999999999999987654211100 000000 0
Q ss_pred -------ccc--ccccccCcccccccccHHHHHHHHHHHhCCCHHH-HHHHH---HHHHHHHHHHHHCCCCCCCeeeeee
Q psy12877 84 -------NLI--DGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE-QDEYA---LSSYKKSADAYKNNVFSSQIVPVSI 150 (814)
Q Consensus 84 -------~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~-~~~~a---~~s~~~A~~a~~ag~~~~ei~p~~~ 150 (814)
... ......++.. ....+++.+++||++||+|+|+ +++++ +++|++|++||++ +
T Consensus 143 ~~~~~~~~~~~~~~e~~~G~~~--p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A-~---------- 209 (498)
T PRK08257 143 ADRGGDPRPMASPAELRHGLDR--PVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHA-W---------- 209 (498)
T ss_pred cccccccccccchhhhhcCCCC--cchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHH-h----------
Confidence 000 0001111111 1235899999999999999998 44444 4899999999987 2
Q ss_pred cCCCCCceeeccCCccccCCCHHhhh----cCCceeccCCCccccCCCCC-cCceeeEEEEcCHHHHHHcC---CCccEE
Q psy12877 151 PQRKGKADIIVNEDEEYKKINFEKFK----SLATVFQKENGTVTAGNAST-LNDGAAACVLMTEEAVRKFN---AKPLAR 222 (814)
Q Consensus 151 ~~~~~~~~~~~~d~~~r~~~t~e~~~----~~~~~~~~~~~pl~~~~~~~-~~DGAaAvvl~s~~~A~~~g---~~p~a~ 222 (814)
.|+++|+|+++ ++|||. +|+|+++||+ .+|||+|+||+|+++|++++ .+|+ +
T Consensus 210 ---------------~r~~~t~eevl~~~~~~rmIa----~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V-~ 269 (498)
T PRK08257 210 ---------------IPRERSAEEIVTPTPDNRMIA----WPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWV-Y 269 (498)
T ss_pred ---------------hCCCCCHHHHhcccCCCCeee----CCccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceE-E
Confidence 34456999999 799998 9999999996 89999999999999999998 4564 9
Q ss_pred EEEEEEecCCC-----CCCCCcH--HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC---CcccCCCCc
Q psy12877 223 IIAYFDAATEP-----IDFPIAP--AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAV 292 (814)
Q Consensus 223 I~g~~~~~~~p-----~~~~~~~--~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~---~vN~~GG~l 292 (814)
|.|++...+.. .++...+ ..+++++|++||++++|||++|+||||++.+++++|+||||++ |+|++||++
T Consensus 270 i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~ 349 (498)
T PRK08257 270 LHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLP 349 (498)
T ss_pred EEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChh
Confidence 99999875421 2233333 3699999999999999999999999999999999999999998 999999999
Q ss_pred cccCCCCChHHHHHHHHHHHHHc--CCCCCcc
Q psy12877 293 SLGHPIGMSGARIVIHLCHALKS--GQKGQLS 322 (814)
Q Consensus 293 a~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~ 322 (814)
++|||++++|+++++|+++|||+ +++||++
T Consensus 350 s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~ 381 (498)
T PRK08257 350 FFGGPGNNYVTHAIAEMVERLRANPGRRGLVT 381 (498)
T ss_pred hcCCchhhHHHHHHHHHHHHHhhcCCCEEEEE
Confidence 99999999999999999999997 5666655
|
|
| >PF10237 N6-adenineMlase: Probable N6-adenine methyltransferase; InterPro: IPR019369 This family of proteins, which are of approximately 200 residues in length, contain a highly conserved Glu-Phe-Trp (QFW) motif close to the N terminus and an Asp/Asn-Pro-Pro-Tyr/Phe motif in the centre | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=323.87 Aligned_cols=131 Identities=44% Similarity=0.844 Sum_probs=123.0
Q ss_pred CCcceeEehhhhhhchHHHHhccCCCCeEEEEecCcccHHhhh-hCC---------------------------CCCCCc
Q psy12877 681 QLSQFWYDENTTQRLSEEAVCRAGKEGSIALISCPTLYPKIRE-LAP---------------------------DAKDVP 732 (814)
Q Consensus 681 ~~sq~~y~e~t~~~l~~~~~~~~~~~g~iA~~s~ps~~~~~~~-~~~---------------------------~~~~~~ 732 (814)
|+||+||+++|++.|++++++.+.++++||||||||+|.+|++ ..+ +|+++|
T Consensus 1 qlsQfwYs~~T~~~l~~~l~~~~~~~~~iaclstPsl~~~l~~~~~~~~~~~Lle~D~RF~~~~~~~F~fyD~~~p~~~~ 80 (162)
T PF10237_consen 1 QLSQFWYSDETAEFLARELLDGALDDTRIACLSTPSLYEALKKESKPRIQSFLLEYDRRFEQFGGDEFVFYDYNEPEELP 80 (162)
T ss_pred CccccccCHHHHHHHHHHHHHhcCCCCEEEEEeCcHHHHHHHhhcCCCccEEEEeecchHHhcCCcceEECCCCChhhhh
Confidence 6899999999999999999998888899999999999999998 211 256899
Q ss_pred ccccccccEEEeCCCCCCHHHHHHHHHHhhcccc---ceeeeehHHHHHHHHhhcCcceeeeeecccCCCccceeeeecC
Q psy12877 733 RELSAHYDLVVLDPPFLSDECLTKAAVTAKLPLF---VSLTVSGEIMQDLALRLLGVKKCKFIPRHKNNLANDFACFVNF 809 (814)
Q Consensus 733 ~~~~~~~d~~~~dppfl~~~c~~k~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~f~p~h~~~l~~~f~~~~n~ 809 (814)
++++++||+||+||||||||||+|+++|+|+|++ |+|+|||++|+++++|+|++++|+|+|+|+|||+|||+||+||
T Consensus 81 ~~l~~~~d~vv~DPPFl~~ec~~k~a~ti~~L~k~~~kii~~Tg~~~~~~~~~ll~~~~~~f~p~h~~~L~n~f~~~~n~ 160 (162)
T PF10237_consen 81 EELKGKFDVVVIDPPFLSEECLTKTAETIRLLLKPGGKIILCTGEEMEELIKKLLGLRMCDFQPEHPNNLSNEFRCYANY 160 (162)
T ss_pred hhcCCCceEEEECCCCCCHHHHHHHHHHHHHHhCccceEEEecHHHHHHHHHHHhCeeEEeEEeccccCCcceeEeEecC
Confidence 9999999999999999999999999999999975 5999999999999999999999999999999999999999999
Q ss_pred CC
Q psy12877 810 DS 811 (814)
Q Consensus 810 ~~ 811 (814)
||
T Consensus 161 ~~ 162 (162)
T PF10237_consen 161 ES 162 (162)
T ss_pred CC
Confidence 97
|
This latter motif is characteristic of N-6 adenine-specific DNA methylases and could be involved in substrate binding or in the catalytic activity (, ). |
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=330.51 Aligned_cols=273 Identities=24% Similarity=0.346 Sum_probs=225.0
Q ss_pred HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc-cccCcc-cc
Q psy12877 20 FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI-VYDGLS-DV 97 (814)
Q Consensus 20 ~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 97 (814)
..|+. ++|.+.||+.|++|.+++.+|-+.|++|.+|+||+.|+|+|++............-.....+.+ ...++. .|
T Consensus 72 evgmt-gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~p 150 (408)
T KOG1406|consen 72 EVGMT-GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAP 150 (408)
T ss_pred hcccc-CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCc
Confidence 68997 9999999999999999999999999999999999999999987543211000000000111111 112222 23
Q ss_pred cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHhhhc
Q psy12877 98 YNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKS 177 (814)
Q Consensus 98 ~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~ 177 (814)
.....||..+.++|++||..+|++++++-+.|++...||.. . .|+.+|+|++.+
T Consensus 151 maaqmfgnagkehmekygtk~ehfakiawknhkhsvnnpys-q-------------------------f~deysldqvm~ 204 (408)
T KOG1406|consen 151 MAAQMFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS-Q-------------------------FRDEYSLDQVMK 204 (408)
T ss_pred chHHHhhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhH-h-------------------------hhhhccHHHHhc
Confidence 34445899999999999999999999999999998887775 2 233459999999
Q ss_pred CCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccE-EEEEEEEecCCCCCCCC----------cHHHHHHH
Q psy12877 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA-RIIAYFDAATEPIDFPI----------APAFAIPT 246 (814)
Q Consensus 178 ~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a-~I~g~~~~~~~p~~~~~----------~~~~a~~~ 246 (814)
+|-++ +.++.+.|||.+|||+|.||.||...++++++-.| +|+|.....+.|..+.. -...++++
T Consensus 205 s~~v~----dflt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~ 280 (408)
T KOG1406|consen 205 SPQVV----DFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKR 280 (408)
T ss_pred chHHH----HHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHH
Confidence 99999 89999999999999999999999999999987543 89998888776655431 12468999
Q ss_pred HHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC------------------CcccCCCCccccCCCCChHHHHHHH
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGAVSLGHPIGMSGARIVIH 308 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~------------------~vN~~GG~la~Ghp~gasG~~~l~e 308 (814)
+|+++|++|.||+++|+||||+..+|+..|+||+|++ -||++||+++.|||+|+||+.+.+|
T Consensus 281 l~aksgltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcae 360 (408)
T KOG1406|consen 281 LFAKSGLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAE 360 (408)
T ss_pred HHHHcCCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHH
Confidence 9999999999999999999999999999999999987 5999999999999999999999999
Q ss_pred HHHHHHc--CCCCCccc
Q psy12877 309 LCHALKS--GQKGQLSQ 323 (814)
Q Consensus 309 ~v~qLr~--g~~gl~~~ 323 (814)
+..|||+ ++|++...
T Consensus 361 lcwqlrg~agkrqvpna 377 (408)
T KOG1406|consen 361 LCWQLRGLAGKRQVPNA 377 (408)
T ss_pred HHHHHhhhhccccCCCc
Confidence 9999999 88888653
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=340.08 Aligned_cols=210 Identities=48% Similarity=0.709 Sum_probs=176.6
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGET 78 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~ 78 (814)
+||+++.+.++|++|++++.+||+..+|+++|+++|+||++||.+|+++|++|++|++||+|+|+||+.|+... +...
T Consensus 53 ~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~ 132 (264)
T PF00108_consen 53 VGNVLQEGEGQNIARQAALAAGLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGA 132 (264)
T ss_dssp EE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTS
T ss_pred cccccccccchhhhhhhhhhcccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccccccccccccccccc
Confidence 58999988899999999999999999999999999999999999999999999999999999999999998763 3344
Q ss_pred cCCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCce
Q psy12877 79 KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKAD 158 (814)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~ 158 (814)
.++.....+....+.+.+++....|+++||+++++||||||+||+||++||+||.+++++|+|++||+|++++.+||++.
T Consensus 133 ~~g~~~~~d~~~~~~~~~~~~~~~Mg~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~~ 212 (264)
T PF00108_consen 133 PLGDAKLEDSLLRDGLYDPYAGQPMGITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEEV 212 (264)
T ss_dssp SSSGEEEEEHHHHHTTCCTTTTSHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEEE
T ss_pred ccCccccccccccccccccccccccccccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeecccccee
Confidence 44443444455556677788888999999999999999999999999999999999999999999999999998888888
Q ss_pred eeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHH
Q psy12877 159 IIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEE 210 (814)
Q Consensus 159 ~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~ 210 (814)
+++.||.+|+++|+|+|.++||+|++.+|.+|++|+|+++|||+++||+|+|
T Consensus 213 ~~~~De~~r~~~~~e~l~~L~p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 213 TVDRDEGIRPDTTLEKLAKLKPAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp EE-S-STCGTT--HHHHHTS-BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred eeeccchhhcchhHHHHhcccccccccccccccccCCCccchhheEEEeecC
Confidence 9999999999999999999999997756899999999999999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=356.62 Aligned_cols=274 Identities=17% Similarity=0.151 Sum_probs=213.2
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHH-HHHHcCCCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQ-AVIFAGLPKS 454 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~-~a~~~Gl~~~ 454 (814)
.|++|+|||+++|||+++.+ +.+..+|+.+|+++||+|+||+++|||.+++++..+...++++.+. ++..+|++.
T Consensus 14 ~m~~VaIvG~g~Tpfgr~~~---~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~- 89 (430)
T PRK06365 14 KSRDVYMVAAGVTKFDKASP---YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP- 89 (430)
T ss_pred hccCEEEEEeeecCccccCC---CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-
Confidence 35789999999999998532 4788999999999999999999999999988876554455566655 478999985
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+|.++++++|+||..||..|+++|++|.+|+||++|+|+|+..++.......... .+..+...+.... ...|++.
T Consensus 90 ~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~----~d~~~~~~~g~~~-~~~~al~ 164 (430)
T PRK06365 90 KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALA----SDTNFDYPLGGFY-TGYYAMM 164 (430)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhccc----ccccccccccCcc-HHHHHHH
Confidence 8999999999999999999999999999999999999999876632110000000 0000001111111 2347999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
+++||++||+|||++++|++++|+||.+ ||+++++. |+| +|++.++|++ .
T Consensus 165 a~ry~~~yG~t~e~la~vav~~~~~A~~-NP~A~~~~---~~t----------------------~e~v~~s~~i----~ 214 (430)
T PRK06365 165 AVRHMYEFGTTVEQLAKVSVKNHGNAIH-NPFAQSPM---KIT----------------------VEDVRKSPMV----S 214 (430)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHhh-CcHhhcCC---CCC----------------------HHHHhcCCcc----c
Confidence 9999999999999999999999999999 99998865 334 4555555444 6
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC--CCCCCCc--------------------------
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT--EPIDFPI-------------------------- 666 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~--~p~~~~~-------------------------- 666 (814)
+|||++|||+++|||+|+||+|+|+|++++.+|+ +|+|++.... ++..+..
T Consensus 215 ~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (430)
T PRK06365 215 YPLTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFR 293 (430)
T ss_pred cCcchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEeccccccccccccccccccccccccccccccccccccH
Confidence 8999999999999999999999999999999985 7877776532 3222111
Q ss_pred hHHhHHHHHHHhcCCC---cceeEeh
Q psy12877 667 APAFAIPTLLKNGGQL---SQFWYDE 689 (814)
Q Consensus 667 g~~~A~~~~~~~~~~~---sq~~y~e 689 (814)
....|++++|+++|+. +|+|++|
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~E 319 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIE 319 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEE
Confidence 2236999999999995 8999987
|
|
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=322.17 Aligned_cols=310 Identities=31% Similarity=0.445 Sum_probs=272.6
Q ss_pred CCCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCC
Q psy12877 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 375 ~~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~ 454 (814)
+++++|++|.+.||||.-....++++-+.||+.++++..|++..++.+.+|.+++|++++.-...+++|..++.+|+++.
T Consensus 39 kn~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdk 118 (465)
T KOG1392|consen 39 KNMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDK 118 (465)
T ss_pred cCCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCC
Confidence 57889999999999998777778899999999999999999999999999999999999887788999999999999999
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCcc----------CCCC-----ccccccccc
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGET----------KYGG-----MNLIDGIVY 519 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~----------~~~~-----~~~~~~~~~ 519 (814)
.|+.||..+|-|..+|+..+.-+|++|.+|++++||+|-||.+|++.++... ..+. ......++.
T Consensus 119 tpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nfla 198 (465)
T KOG1392|consen 119 TPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLA 198 (465)
T ss_pred CccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccC
Confidence 9999999999999999999999999999999999999999999997764321 0110 001111121
Q ss_pred c---ccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc
Q psy12877 520 D---GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 596 (814)
Q Consensus 520 ~---~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~ 596 (814)
+ ..........||..+.|++..|+++|.+||+||.+||..|..++.+|+|.+ ++|+.++.++- ...+|+++|
T Consensus 199 pelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~----~t~kdngir 273 (465)
T KOG1392|consen 199 PELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDP----KTIKDNGIR 273 (465)
T ss_pred cCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCc----ceecCCCcc
Confidence 1 222334567899999999999999999999999999999999999999998 46998876553 235899999
Q ss_pred cCCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-CCchHHhHHHHH
Q psy12877 597 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-FPIAPAFAIPTL 675 (814)
Q Consensus 597 ~~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-~~~g~~~A~~~~ 675 (814)
..++|+|++|||.|.++.|++|+.|+|-++|||.|+++++||+|.+.|.+|-+|++.|=+.++||.+ +..||.++++++
T Consensus 274 vssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay~ipkl 353 (465)
T KOG1392|consen 274 VSSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAYVIPKL 353 (465)
T ss_pred cCCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccccccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999888854 558999999999
Q ss_pred HHhcCC-CcceeEeh
Q psy12877 676 LKNGGQ-LSQFWYDE 689 (814)
Q Consensus 676 ~~~~~~-~sq~~y~e 689 (814)
|+.+|+ +.+||.+|
T Consensus 354 l~kagltlkdid~fe 368 (465)
T KOG1392|consen 354 LDKAGLTLKDIDVFE 368 (465)
T ss_pred HHHcCCcccccchhh
Confidence 999999 68998887
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=349.54 Aligned_cols=269 Identities=20% Similarity=0.226 Sum_probs=212.2
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||+++|||+++. +.+..+|+.+++++||+|+||+++|||.+++|+..+..........++..+|++ ..|.
T Consensus 7 ~~v~IvG~g~tp~~~~~----~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~ 81 (398)
T PRK06157 7 DKVAILGMGCTKFGERW----DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPV 81 (398)
T ss_pred CCeEEEEeccccccccC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCE
Confidence 67999999999999864 588999999999999999999999999999998654211112234566789997 4899
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAEN 537 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~ 537 (814)
++++.+|+||..+|+.|+++|++|++|+||++|+|+|++.++..... ...+. ... .....+ .....|++.+++
T Consensus 82 ~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~-~~~~~--~~~-~~~~~~---~~~~~~al~a~~ 154 (398)
T PRK06157 82 TRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPV-ANPGT--LAD-MTMPNV---TAPGNFAQLASA 154 (398)
T ss_pred EEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccc-ccccc--chh-cccccC---chHHHHHHHHHH
Confidence 99999999999999999999999999999999999998765421100 00000 000 000011 112357899999
Q ss_pred HHHHcCCCHHHH----HHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccC
Q psy12877 538 TAKKFNISRDEQ----DEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE 613 (814)
Q Consensus 538 ~~~~~Gitre~~----~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~ 613 (814)
||++||+|||++ ++|++++|+||.+ ||.++++++ +|+|++.++||+
T Consensus 155 ~~~~yG~t~e~~~~~~a~vav~~~~~A~~-np~A~~r~~-------------------------~t~e~v~~s~~v---- 204 (398)
T PRK06157 155 YAAKYGVSREDLKRAMAHVSVKSHANGAR-NPKAHLRKA-------------------------VTEEQVLKAPMI---- 204 (398)
T ss_pred HHHHhCCCHHHHcccccHHHHHHHHHHhc-CChhhcCCC-------------------------CCHHHHhcCCcc----
Confidence 999999999999 7999999999998 999988753 245666677777
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC----------CCCCCCchHHhHHHHHHHhcCCC-
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----------EPIDFPIAPAFAIPTLLKNGGQL- 682 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~----------~p~~~~~g~~~A~~~~~~~~~~~- 682 (814)
++|++++|||+++|||+|+||+|+++|++++.+|.+||+|++.+.+ +|..+. .+..|++++|+++|+.
T Consensus 205 ~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~ 283 (398)
T PRK06157 205 AGPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITD 283 (398)
T ss_pred cCCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCC
Confidence 5799999999999999999999999999999845579999987633 232333 3567999999999985
Q ss_pred --cceeEeh
Q psy12877 683 --SQFWYDE 689 (814)
Q Consensus 683 --sq~~y~e 689 (814)
+|+|+.|
T Consensus 284 ~~~Did~~E 292 (398)
T PRK06157 284 PREELSMAE 292 (398)
T ss_pred chhcCCEEE
Confidence 8899997
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=348.59 Aligned_cols=285 Identities=21% Similarity=0.230 Sum_probs=219.8
Q ss_pred CCCceeEeceeeccc-ccC-----------CCCCCCCCHHHHHHHHHHHHHHHcCCCCcC--cceEEEEecccCC--CCC
Q psy12877 376 KPGDVFIVSGSRTPM-GSF-----------RSSLVSLSATKLGAVAIESAIQKANMDKSD--VQEVYMGNVCQAG--LGQ 439 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~-~~~-----------~g~~~~~~~~eLa~~A~~~AL~dAGl~~~d--ID~vivG~~~~~~--~~~ 439 (814)
.|++|+|||++|||| ++. .|.+++.+..+|+.+|+++||+|+||+++| ||.+++|+..+.. .+.
T Consensus 10 ~~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~ 89 (438)
T PTZ00455 10 AAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQG 89 (438)
T ss_pred hcCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEecccccccccc
Confidence 456899999999999 872 567788999999999999999999999999 9999999986544 346
Q ss_pred hHHHHHHHHcCCC------CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCc----cCCC
Q psy12877 440 APCRQAVIFAGLP------KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGE----TKYG 509 (814)
Q Consensus 440 ~~a~~~a~~~Gl~------~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~----~~~~ 509 (814)
++++.+++.+|++ ..+|.++|+++|+||+.||..|+++|++|.+|+|||+|+|+|++.|....... ..+.
T Consensus 90 ~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~ 169 (438)
T PTZ00455 90 HLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYR 169 (438)
T ss_pred chHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhcc
Confidence 7889888887776 57899999999999999999999999999999999999999998774211000 0000
Q ss_pred CccccccccccccccccccccHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceE
Q psy12877 510 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFN-ISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 588 (814)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~~~~G-itre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~ 588 (814)
......+..++. .+++.+ +||++|| +|||+||+||+++|+|+.. ||.++++.+ |+|+++
T Consensus 170 ~~~~~~~~~~~~--------~~a~~~-~ym~~~ggitrE~la~vAvka~~~a~~-nP~A~~~~~--~~t~~~-------- 229 (438)
T PTZ00455 170 RQRKLDDFTFPC--------LFAKRM-KYIQEHGHFTMEDTARVAAKAYANGNK-NPLAHMHTR--KLSLEF-------- 229 (438)
T ss_pred ccccccCcchHH--------HHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHhc-CCHhhccCC--CCCcee--------
Confidence 000000000011 122332 8889996 9999999999999999999 999987432 234332
Q ss_pred eccCCccccCCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCc----eEEEEEeeeccC----C
Q psy12877 589 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKP----LARIIAYFDAAT----E 660 (814)
Q Consensus 589 ~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p----~a~I~g~~~~~~----~ 660 (814)
..|+.+| +.|.|.+ +++ ..|++++|||+++|||+|+||+|+++|++++++| .+||+|++.+++ +
T Consensus 230 -~~d~~~~--~~e~l~s-~~i----~~pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~ 301 (438)
T PTZ00455 230 -CTGASDK--NPKFLGN-ETY----KPFLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYED 301 (438)
T ss_pred -ecccccc--chhhhcC-Ccc----cCcCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccC
Confidence 2355555 4444421 222 5789999999999999999999999999999888 689999998876 4
Q ss_pred C---CCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 661 P---IDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 661 p---~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
| ..++.+ ..|++++|+++|+ .+|+|+.|
T Consensus 302 ~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~E 333 (438)
T PTZ00455 302 PPDATRMFTS-RAAAQKALSMAGVKPSDLQVAE 333 (438)
T ss_pred ccccccchHH-HHHHHHHHHHcCCCHHHCcEee
Confidence 5 334433 6899999999999 58999997
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=346.95 Aligned_cols=273 Identities=16% Similarity=0.188 Sum_probs=215.9
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||++.|||+++. +.++.+|+.+|+++||+|+||++++||.+++|+..+......+++.++..+|++. .+.
T Consensus 1 ~~v~IvG~g~t~~~~~~----~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~-~~~ 75 (385)
T PRK12578 1 RRVAVIGVGNSKFGRRD----DVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTG-KVP 75 (385)
T ss_pred CceEEEeecccceeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCC-CCe
Confidence 57999999999999975 4889999999999999999999999999999987653333457888999999974 567
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAEN 537 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~ 537 (814)
++++.+|+||+.+|..|+++|++|.+|+||++|+|+|++.+............ ........+.......+++.+++
T Consensus 76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~a~~a~~ 151 (385)
T PRK12578 76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGG----NYQWEYHFYGTTFPTYYALYATR 151 (385)
T ss_pred eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhccccc----ccccccccCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765321100000000 00000000111111245678999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCcc
Q psy12877 538 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTV 617 (814)
Q Consensus 538 ~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~pl 617 (814)
||++||+|||++++|++++|+||.. ||.++|++++ ++++++++|++ ++||
T Consensus 152 ~m~~~g~t~e~~a~va~~~~~~A~~-np~a~~~~~i---~~e~v~~s~~i--------------------------~~Pl 201 (385)
T PRK12578 152 HMAVYGTTEEQMALVSVKAHKYGAM-NPKAHFQKPV---TVEEVLKSRAI--------------------------SWPI 201 (385)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHhc-CChhhcCCCC---CHHHHhcCCcc--------------------------CCCc
Confidence 9999999999999999999999998 8999999865 44444444433 6899
Q ss_pred ccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC------CCCCCCc-hHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 618 TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT------EPIDFPI-APAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 618 t~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~------~p~~~~~-g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
|++|||+++|||+|+||+|+|+|++++.+|.+||+|++.+.+ +|+.+.. ++..|++++|+++|+ .+|||+.|
T Consensus 202 ~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~e 281 (385)
T PRK12578 202 KLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVAT 281 (385)
T ss_pred cHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999999999999999999999999777789999998632 3343443 567899999999999 68999986
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=347.27 Aligned_cols=277 Identities=18% Similarity=0.281 Sum_probs=208.3
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CCh-H-HHHHHHHcCCCCC
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQA-P-CRQAVIFAGLPKS 454 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~-~-a~~~a~~~Gl~~~ 454 (814)
++|+|||+++|||+|+ +...+.++.+|+.+|+++||+|+||++++||.+++|+..+... +.. . ........++. .
T Consensus 3 ~~v~Ivg~~~t~~~r~-~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~-g 80 (403)
T PRK06289 3 DDVWVLGGYQSDFARN-WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW-G 80 (403)
T ss_pred CcEEEEeCCcCccccc-cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-C
Confidence 5799999999999985 3445689999999999999999999999999999997644311 111 1 11111233442 3
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccc-cccHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYN-KIHMGN 533 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~mg~ 533 (814)
.|.++++.+|+||..+|..|+.+|++|.+|+||++|+|+|++.|...... ..+...... ...+..++. ...|++
T Consensus 81 ~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~al 155 (403)
T PRK06289 81 VPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAE--HLGAAAWTG---HEGQDARFPWPSMFAR 155 (403)
T ss_pred CceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHH--hhhcccccc---cccccCCCccHHHHHH
Confidence 57899999999999999999999999999999999999998765321100 000000000 001111111 234799
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCcccccc--ceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIV--PVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~--p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
.|++||++||+|||+|++|++++|+||.+ ||+++++..+. |++++|++.+|++
T Consensus 156 ~a~~y~~~yG~t~e~la~va~~~~~~A~~-NP~A~~~~~~~~~~~~~~d~~~s~~i------------------------ 210 (403)
T PRK06289 156 VADEYDRRYGLDEEHLRAIAEINFANARR-NPNAQTRGWAFPDEATNDDDATNPVV------------------------ 210 (403)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHcc-CcHhhcCccccccccchhhhhcCCcc------------------------
Confidence 99999999999999999999999999998 99999986432 2344444444433
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCC-CceEEEEEeeeccC-------------CCCCCCchHHhHHHHHHH
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAAT-------------EPIDFPIAPAFAIPTLLK 677 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~-~p~a~I~g~~~~~~-------------~p~~~~~g~~~A~~~~~~ 677 (814)
++|||++|||+++|||+|+||+|+|+|++++. +|.+||+|++.+.. +|..+. ++..|++++|+
T Consensus 211 --~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~ 287 (403)
T PRK06289 211 --EGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLP-HVRQAVLDAYR 287 (403)
T ss_pred --cCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccccccccccccccccccH-HHHHHHHHHHH
Confidence 78999999999999999999999999999986 67689999997633 222332 35679999999
Q ss_pred hcCC-CcceeEeh
Q psy12877 678 NGGQ-LSQFWYDE 689 (814)
Q Consensus 678 ~~~~-~sq~~y~e 689 (814)
++|+ .+|+|+.|
T Consensus 288 ~Agi~~~Didv~e 300 (403)
T PRK06289 288 RAGVGLDDLDGFE 300 (403)
T ss_pred HcCCCHHHCeEEe
Confidence 9999 68899887
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=341.65 Aligned_cols=270 Identities=16% Similarity=0.111 Sum_probs=214.8
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCC-ChHHHHHHHHcCCCCCcc
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG-QAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~-~~~a~~~a~~~Gl~~~~~ 456 (814)
++|+|||++.|||+++. +.+..+|+.+|+++||+|+||+++|||.+++++......+ ...+..++..+|+. .+|
T Consensus 9 ~~vaIvG~g~t~~~~~~----~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~ 83 (392)
T PRK06065 9 KRVAVIGAGLTLFRRRL----LETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKP 83 (392)
T ss_pred CceEEEEecccCCcCCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCC
Confidence 57999999999999975 4788999999999999999999999999999864222222 33667788889986 479
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae 536 (814)
.++++.+|+||..++..|+++|++|.+|+|||+|+|+|+........ .... ..+.. +...+.+.....+++.++
T Consensus 84 ~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~---~~~~--~~~~~-~~~p~g~~~~~~~Al~a~ 157 (392)
T PRK06065 84 VSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQA---VFRY--IWDPI-LEKPLNPNLIWIFAMEMH 157 (392)
T ss_pred eEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhH---HHhh--hccch-hccCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999998642110000 0000 00000 010111222235789999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCc
Q psy12877 537 NTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616 (814)
Q Consensus 537 ~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~p 616 (814)
+||++||+|+|++++|++++|+||.. ||+++|++ |+|+++++++|+| ++|
T Consensus 158 rym~~yG~~~e~lA~vav~~~~~A~~-NP~A~~r~---~lt~e~vl~s~~i--------------------------a~P 207 (392)
T PRK06065 158 RYMATYGIKKEEIALVSVKNKRNALN-NPYAQLGS---KITVEDVLKSEVL--------------------------VWP 207 (392)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHhhcc-CchhhhcC---CCCHHHHhcCCcc--------------------------cCC
Confidence 99999999999999999999999999 99999987 5577888877766 899
Q ss_pred cccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC------CCCCchHHhHHHHHHHhcCCC---cceeE
Q psy12877 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP------IDFPIAPAFAIPTLLKNGGQL---SQFWY 687 (814)
Q Consensus 617 lt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p------~~~~~g~~~A~~~~~~~~~~~---sq~~y 687 (814)
||++|||+++|||+|+||+|+|+|++++.+|+ ||.|++...+.. .....++..|++++|+++|+. +|+|+
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~ 286 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDV 286 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcE
Confidence 99999999999999999999999999998885 899999753321 122334568999999999995 88999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.|
T Consensus 287 ~e 288 (392)
T PRK06065 287 AE 288 (392)
T ss_pred EE
Confidence 97
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=345.17 Aligned_cols=272 Identities=20% Similarity=0.253 Sum_probs=211.8
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
+|+|||+++|||++.. ++.+..+|+.+|+++||+|+||++++||.+++|+..+.... ...+...+|+. ..|.+
T Consensus 2 ~v~IvG~~~t~~~~~~---~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~ 74 (391)
T PRK08256 2 KVFVAGVGMTPFEKPG---ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIV 74 (391)
T ss_pred cEEEEeccccccccCC---CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCc
Confidence 5999999999999642 35788999999999999999999999999999977543321 22455678985 46889
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCc-cccccccccccc-cccccccHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGM-NLIDGIVYDGLS-DVYNKIHMGNC 534 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~mg~~ 534 (814)
+++.+|+||+.+|..|+++|++|++|+||++|+|+|+..+.... ......+.. ...+.+ ..+. .......|++.
T Consensus 75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~ 152 (391)
T PRK08256 75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAEL--QGFDPAPPALRMFGGA 152 (391)
T ss_pred ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhh--cccccCCccHHHHHHH
Confidence 99999999999999999999999999999999999986542110 000001000 000000 0111 01112368999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
+++||++||+|||++++|++++|+||.. ||+++|+++ + |+|++.++||+ +
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~-np~A~~~~~---~----------------------t~e~~~~s~~i----~ 202 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAAN-NPYAQFRDE---Y----------------------TLEDVLASPMI----W 202 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhc-CChhhcCCC---C----------------------CHHHHhcCCcc----c
Confidence 9999999999999999999999999998 999988763 3 45566666666 5
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCc----------hHHhHHHHHHHhcCC-Cc
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI----------APAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~----------g~~~A~~~~~~~~~~-~s 683 (814)
+|||++|||+++|||+|+||+|+|+|++++++|.++|+|++...++|..+.. ++..|++++|+++|+ .+
T Consensus 203 ~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~ 282 (391)
T PRK08256 203 GPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPE 282 (391)
T ss_pred CCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHH
Confidence 7999999999999999999999999999997777899999988776544321 356799999999998 58
Q ss_pred ceeEeh
Q psy12877 684 QFWYDE 689 (814)
Q Consensus 684 q~~y~e 689 (814)
|+|+.|
T Consensus 283 DiD~~e 288 (391)
T PRK08256 283 DIDVVE 288 (391)
T ss_pred HCCEEe
Confidence 898887
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=337.00 Aligned_cols=268 Identities=18% Similarity=0.105 Sum_probs=207.4
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcC-CCC-cCcceEEEEecccCCCCCh-HHHHHHHHcCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKAN-MDK-SDVQEVYMGNVCQAGLGQA-PCRQAVIFAGLP 452 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAG-l~~-~dID~vivG~~~~~~~~~~-~a~~~a~~~Gl~ 452 (814)
.|++|+|||+++|||+++.. +++..+|+.+|+++||+||| |++ +|||++++++. ....+.. ....++..+|+.
T Consensus 2 ~~~~vaIvG~g~t~~~~~~~---~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~ 77 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPTTP---EVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA 77 (385)
T ss_pred CCCcEEEEEeeecCCcCCCC---CCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC
Confidence 36789999999999996432 48899999999999999999 997 79999988642 2111111 122355678884
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccc-cccccH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDV-YNKIHM 531 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~m 531 (814)
..|.+++ |+||..++..|+++|++|.+|+||++|+|+++..... ....... .+.. +...+.. ....++
T Consensus 78 -~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~-~~~~~~~-----~~~~-~~~p~g~~~p~~~~ 146 (385)
T PRK06066 78 -MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTF-SDVVKFA-----MDPI-YVRPIGPPNPHFIA 146 (385)
T ss_pred -CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccch-hhhhhcc-----cCcc-eecccCCCcHHHHH
Confidence 3577776 8999999999999999999999999999998652110 0000000 0000 0011111 122356
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
++.+++||++||+|+|++++|++++|+||.+ ||+++|++ |+|++++++||+|
T Consensus 147 al~a~rym~~yG~t~E~lA~Vavk~r~nA~~-NP~A~~r~---~~t~edvl~S~~i------------------------ 198 (385)
T PRK06066 147 GLDAVKFMSRKGITREDLALVVEKNKKAGLS-NPRASYAS---NISLEDVLSSEYV------------------------ 198 (385)
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHHhc-CChhhcCC---CCCHHHHhcCCcc------------------------
Confidence 8999999999999999999999999999999 99999987 5588888888777
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC----CCCCCCchHH--hHHHHHHHhcCCC---
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----EPIDFPIAPA--FAIPTLLKNGGQL--- 682 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~----~p~~~~~g~~--~A~~~~~~~~~~~--- 682 (814)
++|||++|||+++|||+|+||+|+|+|++++.+|+ ||+|++...+ .+..+...+. .|++++|+++|+.
T Consensus 199 --a~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~ 275 (385)
T PRK06066 199 --VYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPR 275 (385)
T ss_pred --cCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCH
Confidence 89999999999999999999999999999999997 9999997542 3444544554 6999999999995
Q ss_pred cceeEeh
Q psy12877 683 SQFWYDE 689 (814)
Q Consensus 683 sq~~y~e 689 (814)
+|+|+.|
T Consensus 276 ~DiD~~e 282 (385)
T PRK06066 276 KEVDAAE 282 (385)
T ss_pred HHCcEEE
Confidence 7899997
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=338.89 Aligned_cols=270 Identities=23% Similarity=0.266 Sum_probs=217.0
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC--CChHHHHHHHHcCCCCCc
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL--GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~--~~~~a~~~a~~~Gl~~~~ 455 (814)
++|+|||+++|||+++. +.++.+|+.+|+++||+|+||++++||.+++|+..+... ..++++.++..+|++ ..
T Consensus 2 ~~v~IvG~~~tp~~~~~----~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~ 76 (389)
T PRK06064 2 RDVAIIGVGQTKFGELW----DVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PI 76 (389)
T ss_pred CcEEEEEcccccceecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CC
Confidence 57999999999999864 478999999999999999999999999999998754332 245788899999997 67
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCcccc-CCCccCCCCccccccccccccccccccccHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL-NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
|.++++.+|+||+.+|..|+++|++|.+|+||++|.|+++..+... ........ +. .+..++.......|++.
T Consensus 77 ~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~-----~~-~~~~~~g~~~~~~~al~ 150 (389)
T PRK06064 77 PATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAG-----DY-EWEEFFGATFPGLYALI 150 (389)
T ss_pred CeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhccc-----cc-ccccccCCchHHHHHHH
Confidence 9999999999999999999999999999999999999998765310 00000000 00 01111111112368999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
+++||++||+|||+++++++++|+||.+ ||.+++++++ ++|++.++||+ .
T Consensus 151 a~~~~~~yG~s~e~~a~~a~~~~~~A~~-np~a~~~~~~-------------------------t~~~~~~s~~i----~ 200 (389)
T PRK06064 151 ARRYMHKYGTTEEDLALVAVKNHYNGSK-NPYAQFQKEI-------------------------TVEQVLNSPPV----A 200 (389)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHhh-CcHhhhCCCC-------------------------CHHHHhcCCcc----c
Confidence 9999999999999999999999999988 9999988742 44555666666 5
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC------CC-CCchHHhHHHHHHHhcCC-Cccee
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP------ID-FPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p------~~-~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
+|+|++|||+++|||+++||+|+++|++++.+|+ +|+|++...+.+ +. ...++..|++++|+++|+ .+|++
T Consensus 201 ~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 201 DPLKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred CCCchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 7999999999999999999999999999987785 999999876543 22 234566899999999999 57899
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|.|
T Consensus 280 ~~e 282 (389)
T PRK06064 280 VAE 282 (389)
T ss_pred EEE
Confidence 987
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=337.42 Aligned_cols=274 Identities=19% Similarity=0.193 Sum_probs=207.8
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCC-h-HHHHHHHHcCCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ-A-PCRQAVIFAGLPKS 454 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~-~-~a~~~a~~~Gl~~~ 454 (814)
|++|+|||+++|||+++. +.++.+|+.+|+++||+|+||++++||.+++|+..+..... . ....+...+|+. .
T Consensus 1 ~~~v~Ivg~g~tpfgr~~----~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~ 75 (389)
T PRK07516 1 MMTASIVGWAHTPFGKLD----AETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F 75 (389)
T ss_pred CCcEEEEeCCcceeeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence 468999999999999865 58899999999999999999999999999999875432211 1 222334455775 5
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
.|.++++++|+||..||..|+++|++|.+|+||++|+|+|+..|............+.... .. ....+ ...|++.
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~a~~ 150 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEE---GD-TPGGF-AGVFGRI 150 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccc---cc-cCCCc-HHHHHHH
Confidence 7899999999999999999999999999999999999999877642110000000000000 00 00001 1259999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
|++||++||++||++++|++++|+||.. ||.++++++ +|+++.. +.+.+.+++ +
T Consensus 151 a~~y~~~yg~~~e~~a~vav~~~~~A~~-nP~A~~~~~---~t~~~~~------------------~~~~~~~~i----~ 204 (389)
T PRK07516 151 AQAYFQRYGDQSDALAMIAAKNHANGVA-NPYAQMRKD---LGFEFCR------------------TVSEKNPLV----A 204 (389)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhhhc-CChhhcCCc---ccHHhhh------------------hhhhcCCcc----c
Confidence 9999999999999999999999999999 999999864 4543210 011222333 7
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-------CCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-------EPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-------~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
+|||++|||+++|||+|+||+|+++|++++ +| +||+|++...+ +|.. ..++..|++++|+++|+ .+++|
T Consensus 205 ~pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i~g~~~~~~~~~~~~~~~~~-~~~~~~a~~~a~~~agl~~~did 281 (389)
T PRK07516 205 GPLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRFRARAHVNDFLPLSRRDPLA-FEGPRRAWQRALAQAGVTLDDLS 281 (389)
T ss_pred CCCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEEEEEEeccCcccccCCCccc-cHHHHHHHHHHHHHcCCCHHHCC
Confidence 899999999999999999999999999995 45 69999997643 2322 35777899999999999 57899
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
+.|
T Consensus 282 ~~e 284 (389)
T PRK07516 282 FVE 284 (389)
T ss_pred EEE
Confidence 887
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=334.48 Aligned_cols=270 Identities=15% Similarity=0.062 Sum_probs=213.4
Q ss_pred CCceeEeceeeccc-ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCC-ChHHHHHHHHcCCCCC
Q psy12877 377 PGDVFIVSGSRTPM-GSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG-QAPCRQAVIFAGLPKS 454 (814)
Q Consensus 377 ~~~V~IvG~~rTp~-~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~-~~~a~~~a~~~Gl~~~ 454 (814)
|++|+|||+++||| +++. +.++.+|+.+|+++||+|+||+++|||.+++++......+ ..++..++..+|+. .
T Consensus 2 ~~~v~IvG~g~t~~~~~~~----~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~ 76 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKRQ----DVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-G 76 (386)
T ss_pred CCcEEEEEeecCCcCccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-C
Confidence 57899999999999 6654 4789999999999999999999999999999863211111 23456788899996 5
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
.++++++.+|+||..++..|+++|++|.+|+||++|+|+++....... .. .. .. +...........+++.
T Consensus 77 ~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~---~~-~~----~~--~~~~~g~~~~~~~al~ 146 (386)
T PRK08313 77 KPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWA---LS-IP----VP--FTKPVGAGAGGYFAPH 146 (386)
T ss_pred CceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccc---cc-cc----cc--cccccccchHHHHHHH
Confidence 689999999999999999999999999999999999999875421100 00 00 00 0111112223467899
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
+++||++||+++|+++++++++|+||.+ ||+++|+++ |+|+++++++ ||+ +
T Consensus 147 a~~ym~~~G~~~e~la~vav~~~~~A~~-NP~A~~r~~--~~t~e~v~~s----------------------~~i----a 197 (386)
T PRK08313 147 VRAYIRRSGAPEHIGAMVAVKDRLNGAK-NPYAHLHQP--DITLEKVMAS----------------------QML----W 197 (386)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHcc-CcHHhcCCC--CCCHHHHhcC----------------------Ccc----c
Confidence 9999999999999999999999999999 999999873 1455555544 444 7
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC------CCCCchHHhHHHHHHHhcCCC---cce
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP------IDFPIAPAFAIPTLLKNGGQL---SQF 685 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p------~~~~~g~~~A~~~~~~~~~~~---sq~ 685 (814)
+|||++|||+++|||+|+||+|+|+|++++.+|.+||+|++...+.. .....+...|++++|+++|+. +|+
T Consensus 198 ~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Di 277 (386)
T PRK08313 198 DPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEI 277 (386)
T ss_pred CCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhC
Confidence 89999999999999999999999999999888888999999764321 122346678999999999995 789
Q ss_pred eEehh
Q psy12877 686 WYDEN 690 (814)
Q Consensus 686 ~y~e~ 690 (814)
|+.|-
T Consensus 278 d~~el 282 (386)
T PRK08313 278 DVAEI 282 (386)
T ss_pred CEEEe
Confidence 99874
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=333.58 Aligned_cols=267 Identities=22% Similarity=0.249 Sum_probs=217.6
Q ss_pred eceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCC
Q psy12877 383 VSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNK 462 (814)
Q Consensus 383 vG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~ 462 (814)
||+++|||+++. +.++.+|+.+|+++||+|+||++++||.+++|+..+......+++.++..+|++ ..+.++++.
T Consensus 1 vG~g~t~~~~~~----~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~ 75 (375)
T cd00829 1 VGVGMTPFGRRS----DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA 75 (375)
T ss_pred CeeeecCcccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence 689999999875 589999999999999999999999999999998765443467889999999997 689999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHHHHc
Q psy12877 463 VCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKF 542 (814)
Q Consensus 463 ~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~~~~ 542 (814)
+|+||+.+|..|+++|++|.+|+||++|+|+++..+.... ........ .......+........|++.+++||++|
T Consensus 76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~al~a~~~~~~~ 151 (375)
T cd00829 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDE-AGGRASDL---EWEGPEPPGGLTPPALYALAARRYMHRY 151 (375)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccch-hhccccch---hhhhcccccCCChHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999997763111 00000000 0000001111112346899999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccccCCC
Q psy12877 543 NISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNA 622 (814)
Q Consensus 543 Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~~d~ 622 (814)
|+|||++++|++++|+||.+ ||+++|++ |+| +|++.++||+ .+|+|++||
T Consensus 152 g~t~e~~~~va~~~~~~A~~-np~A~~~~---~~t----------------------~d~~~~~~~i----~~pl~~~~~ 201 (375)
T cd00829 152 GTTREDLAKVAVKNHRNAAR-NPYAQFRK---PIT----------------------VEDVLNSRMI----ADPLRLLDC 201 (375)
T ss_pred CCCHHHHHHHHHHHHHHHhc-CChhhcCC---CCC----------------------HHHHhcCCcc----cCCCchhhc
Confidence 99999999999999999998 89998876 334 4555666677 479999999
Q ss_pred CccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-------CCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 623 STLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-------FPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 623 s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-------~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
|+++|||+|+||+|+++|+++ .+|.++|+|++...+.+.. +..++..|++++|+++|+ ..|+++.|
T Consensus 202 ~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~e 275 (375)
T cd00829 202 CPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAE 275 (375)
T ss_pred CCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999999999999999999 5666899999988776543 556788999999999999 57888887
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=330.84 Aligned_cols=270 Identities=14% Similarity=0.152 Sum_probs=210.5
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
.++|+|||+++|||+++. ++++.+|+.+|+++||+||||+++|||+++++... .+.. ...++..+|+. ..+
T Consensus 4 ~~~vaIvG~g~t~~~~~~----~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~-~~~~~~~lGl~-~~~ 74 (388)
T PRK08142 4 KGKAYIVGAYEHPTRKAP----DKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLG-PASMVDYLGLK-LRH 74 (388)
T ss_pred CCCEEEEEEeeccceeCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCcc-HHHHHHhCCCC-Cee
Confidence 368999999999999875 48899999999999999999999999997652111 1111 23477889996 578
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae 536 (814)
...++.+|+|+..+|..|+++|++|.+|+|||+|+|+++....... .......... + ..+...+.......+++.++
T Consensus 75 ~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~~g~~~~~~~Al~a~ 151 (388)
T PRK08142 75 VDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGT-EPRNWGADAP-D-APFEAPYGPTTHNLYAMCAM 151 (388)
T ss_pred eccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCcccc-cccccccccc-c-cchhcccccccHHHHHHHHH
Confidence 9999999999999999999999999999999999999763311000 0000000000 0 00011111122346788999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCc
Q psy12877 537 NTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616 (814)
Q Consensus 537 ~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~p 616 (814)
+||++||+|+|+++++++++|+||.. ||+++|++ |+|+++++++|+| ++|
T Consensus 152 ~ym~~yG~t~e~la~vav~~~~~A~~-NP~A~~r~---~~t~e~vl~s~~I--------------------------a~P 201 (388)
T PRK08142 152 RHMHEYGTTSEQLAWIKVAASHHAQH-NPHAMLRD---VVTVEDVLNSPMI--------------------------ADP 201 (388)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHhcc-CChhhcCC---CCCHHHHhcCCcc--------------------------cCC
Confidence 99999999999999999999999998 99999987 5578888888777 899
Q ss_pred cccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 617 lt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
||++|||+++|||+|+||+|+|+|++++.+| +||+|++...+ .|+....++..|++++|+++|+ .+|+|++|
T Consensus 202 l~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~e 279 (388)
T PRK08142 202 LHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYAS 279 (388)
T ss_pred chhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 9999999999999999999999999998666 69999997633 3333444566799999999999 57888887
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=329.76 Aligned_cols=262 Identities=18% Similarity=0.168 Sum_probs=209.0
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||+++|||+++. +.++.+|+.+|+++||+|+||+++|||.+++++... ......++..+|++ ..+.
T Consensus 8 ~~vaIvG~g~t~~~~~~----~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~~~ 78 (384)
T PRK06158 8 GRTAIVGAATAGLGEAP----GLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PRFV 78 (384)
T ss_pred CCEEEEEeeeccceeCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Ceee
Confidence 68999999999998764 478999999999999999999999999999987432 22334677889997 4678
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEE-eeeccccCccccCCCccCCCCcccccccccccccc-ccccccHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAG-GMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSD-VYNKIHMGNCA 535 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~-G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~mg~~A 535 (814)
..++.+|+|+..++..|+++|++|.+|+|||+ |.|+++.... .... . .. . .+...+. ......|++.+
T Consensus 79 ~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~-~~~~---~-~~---~--~~~~~~g~~~~~~~~al~a 148 (384)
T PRK06158 79 DGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGK-LRSM---L-DP---Q--PYEAPYKPVNPVSAYALAA 148 (384)
T ss_pred ccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCccc-cccc---c-cc---c--chhcccCCCCcHHHHHHHH
Confidence 89999999999999999999999999999986 7777653211 0000 0 00 0 0011111 11233578999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENG 615 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~ 615 (814)
++||++||+|+|+++++++++|+||.. ||+++|++ |+|+++++++|+| ++
T Consensus 149 ~~ym~~yG~t~e~~a~vav~~~~~a~~-NP~A~~~~---~~t~e~vl~s~~i--------------------------a~ 198 (384)
T PRK06158 149 ARHMHQYGTTREQLAEVAVAARQWAQL-NPEAFMRD---PLTIDDVLAARMV--------------------------SD 198 (384)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhc-CchhhhCC---CCCHHHHhcCCcc--------------------------CC
Confidence 999999999999999999999999998 99999987 4577777776666 89
Q ss_pred ccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC------CCCCCCchHHhHHHHHHHhcCC-CcceeEe
Q psy12877 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT------EPIDFPIAPAFAIPTLLKNGGQ-LSQFWYD 688 (814)
Q Consensus 616 plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~------~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~ 688 (814)
|||++|||+++|||+|+||+|+++|++++.+| ++|+|++.+.+ .|.....+...+++++|+++|+ .+|++++
T Consensus 199 Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ 277 (384)
T PRK06158 199 PLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVV 277 (384)
T ss_pred CCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEE
Confidence 99999999999999999999999999998888 59999986543 2333334556799999999999 5889988
Q ss_pred h
Q psy12877 689 E 689 (814)
Q Consensus 689 e 689 (814)
|
T Consensus 278 E 278 (384)
T PRK06158 278 E 278 (384)
T ss_pred E
Confidence 7
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=328.52 Aligned_cols=273 Identities=18% Similarity=0.229 Sum_probs=211.1
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~ 454 (814)
++++|+|||+++|||+++. .+..+|+.+|+++||+|+||++++||.+++++...... ....++.++..+|++ .
T Consensus 2 ~~~~v~Ivg~~~t~~~r~~-----~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 2 MPEPVYILGAGMHPWGKWG-----RDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCCcEEEEEecccccCCCC-----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 3468999999999999852 57799999999999999999999999999887654432 234567899999996 4
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
.+.++++.+|+||+.+|..|+++|++|.+|+||++|+|+|+..... ............. .....++.. ...|++.
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~-~~~~~~~~~~~~~-~~~~~g~~~---~~~~al~ 150 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFA-PVGGERPDDPDWL-RFHLIGATN---PVYFALL 150 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCc-ccccccccccchh-hcccCCCcc---HHHHHHH
Confidence 6899999999999999999999999999999999999999853111 0000000000000 000011111 2468999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
+++||++||+|||+++.+++++|+||.. ||++++|++ + |+|++.++||+ .
T Consensus 151 a~~~~~~yg~s~e~~a~v~~~~~~~a~~-Np~A~~r~~---~----------------------t~e~v~~s~~i----~ 200 (399)
T PRK06059 151 ARRRMDLYGATVEDFAQVKVKNARHGLL-NPNARYRKE---V----------------------TVEDVLASPVV----S 200 (399)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHcc-CcHhhcCCC---C----------------------CHHHHhcCCcc----c
Confidence 9999999999999999999999999987 999988753 3 45666667776 5
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHc--CCCceEEEEEeeeccCC-C----CCCCch-------H-------HhHHH
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKF--NAKPLARIIAYFDAATE-P----IDFPIA-------P-------AFAIP 673 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~--g~~p~a~I~g~~~~~~~-p----~~~~~g-------~-------~~A~~ 673 (814)
+|+|++|||+++|||+|+||+|+++|+++ +.++.+||+|++.+... + .....+ + ..+++
T Consensus 201 ~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~ 280 (399)
T PRK06059 201 DPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILD 280 (399)
T ss_pred CCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHH
Confidence 79999999999999999999999999999 65566799999976532 1 111121 1 35799
Q ss_pred HHHHhcCC-CcceeEeh
Q psy12877 674 TLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 674 ~~~~~~~~-~sq~~y~e 689 (814)
++|+++|+ .+++|++|
T Consensus 281 ~a~~~agl~~~Did~~E 297 (399)
T PRK06059 281 AAYAEAGIGPEDLSLAE 297 (399)
T ss_pred HHHHHcCCCHHHCcEEe
Confidence 99999999 58999987
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=320.73 Aligned_cols=270 Identities=15% Similarity=0.111 Sum_probs=203.7
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|+|||+++|||+++. ++++.+|+.+|+++||+||||+++|||.+++++. . . .....++..+|++...+.
T Consensus 4 ~~v~IvG~g~t~~~r~~----~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~---~~~~~l~~~lGl~~~~~~ 74 (386)
T PRK07855 4 GKAAIVGIGATEFSKNS----GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-T---NPEIAVARALGIGELKFF 74 (386)
T ss_pred CCEEEEEeeecccccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-c---ccHHHHHHHCCCCCCcce
Confidence 67999999999999874 4789999999999999999999999999987432 1 1 112457788999643577
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeee--ccccCccccC-CCccCCCCccccccccccccccc-cccccHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGME--SMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDV-YNKIHMGN 533 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~E--s~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~mg~ 533 (814)
.+++.+|+||..++..|+++|++|.+|+||++|.. .......... ......... ..+.. +...... .....+++
T Consensus 75 ~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~g~~~~~~~~al 152 (386)
T PRK07855 75 SRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTST-GVDYG-WSYPHGLLTPAAWVAM 152 (386)
T ss_pred eeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeeccccccccccccccccccccccc-ccchh-hhhhcCCCChHHHHHH
Confidence 89999999999999999999999999999999982 2210000000 000000000 00000 0011111 11235789
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCcc-ccccceeccCCCCCcceEeccCCccccCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFS-SQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~-~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~ 612 (814)
.+++||++||+|+|+++++++++|+||.+ ||+++|+ + |+|+++++++|+|
T Consensus 153 ~a~~ym~~~G~t~e~lA~vavk~~~~A~~-NP~A~~~~~---~~t~e~vl~s~~I------------------------- 203 (386)
T PRK07855 153 LARRYMHEYGATSEDFGRVAVADRKHAAT-NPKAWFYGR---PITLEDHQNSRWI------------------------- 203 (386)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhc-ChHhhhcCC---CCCHHHHhcCCcc-------------------------
Confidence 99999999999999999999999999999 9999985 5 5577777777766
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC---------CCCC-c-hHHhHHHHHHHhcCC
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP---------IDFP-I-APAFAIPTLLKNGGQ 681 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p---------~~~~-~-g~~~A~~~~~~~~~~ 681 (814)
++|||++|||+++|||+|+||+|+|+|++++.+|+ ||.|++...+.. .++. . +...|++++|+++|+
T Consensus 204 -a~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi 281 (386)
T PRK07855 204 -AEPLRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGL 281 (386)
T ss_pred -cCCchhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCC
Confidence 89999999999999999999999999999998885 999998754211 1111 1 223699999999999
Q ss_pred -CcceeEeh
Q psy12877 682 -LSQFWYDE 689 (814)
Q Consensus 682 -~sq~~y~e 689 (814)
.+|+|+.|
T Consensus 282 ~~~DiDv~E 290 (386)
T PRK07855 282 GPADIDTAI 290 (386)
T ss_pred CHHHCcEEE
Confidence 47888887
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=314.01 Aligned_cols=264 Identities=16% Similarity=0.092 Sum_probs=199.0
Q ss_pred CCceeEeceeecccccCCCCCCCCCH-HHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCCh-HHHHHHHHcCCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSA-TKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQA-PCRQAVIFAGLPKS 454 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~-~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~-~a~~~a~~~Gl~~~ 454 (814)
|++|+|||+++|||+++.. +.+. .+|+.+|+++||+||||+++|||.++.+.. ....+.. .........|+...
T Consensus 1 M~~vaIvG~g~t~~~~~~~---~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~ 76 (352)
T PRK07937 1 MRDVAVVGFAQAPHVRRTD---GTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPP 76 (352)
T ss_pred CCcEEEEEeeccccccCCC---CCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCC
Confidence 3689999999999998752 2554 899999999999999999999998865432 1111221 12224455777434
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
.|...++ ++|..+|..|+++|++|.+|+||++|+|+++..... ...... .+++. ...+.......+++.
T Consensus 77 ~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~-~~~~~~------~~~~~-~~p~G~~~~~~~Al~ 145 (352)
T PRK07937 77 INESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLR-RVLALQ------LDPYT-VAPLWPDSVSMAGLQ 145 (352)
T ss_pred CceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchh-hhhhcc------CCcce-eccCCCchHHHHHHH
Confidence 5666666 479999999999999999999999999988632110 000000 01111 000111122357899
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
+++||++||+|+|+++++++++|+||.. ||+++|+ +|++|++++|+| +
T Consensus 146 a~~ym~~yG~t~e~lA~vavk~r~nA~~-NP~A~~r-----it~edvl~s~~i--------------------------a 193 (352)
T PRK07937 146 ARAGLDAGKWTEEQMAEVAARSRADARR-NPSAEPS-----ISVDELLARPYF--------------------------A 193 (352)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHhh-Cchhhcc-----CCHHHHhcCCcc--------------------------c
Confidence 9999999999999999999999999999 9999997 488888888877 8
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCC---chHHhHHHHHHHhc-CC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP---IAPAFAIPTLLKNG-GQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~---~g~~~A~~~~~~~~-~~-~sq~~y~e 689 (814)
+|||++|||+++|||+|+||+|+|+|++++.+| +||+|++...+.+ .+. ..+..+++++++++ |+ .+|+|+.|
T Consensus 194 ~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~-~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~E 271 (352)
T PRK07937 194 DPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESP-SLGARDLTRSPSTALAAEAATGGDAGGVDVAE 271 (352)
T ss_pred CCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCc-cccccccccHHHHHHHHHHhcCCCHHHCCEEE
Confidence 999999999999999999999999999999889 6999999865433 222 44566777888886 76 68888887
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=305.38 Aligned_cols=273 Identities=29% Similarity=0.396 Sum_probs=201.3
Q ss_pred eceeecccccCC---CCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHH-HHHHcCCCCCccEE
Q psy12877 383 VSGSRTPMGSFR---SSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQ-AVIFAGLPKSTVCT 458 (814)
Q Consensus 383 vG~~rTp~~~~~---g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~-~a~~~Gl~~~~~~~ 458 (814)
+|++||||+++. |.+....+.+|+.+|+++||+++||+|++||.+++|+..+...+..+++. +...+|+. .+|++
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~ 79 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAI 79 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEE
Confidence 689999999976 77788899999999999999999999999999999998776555677775 44445654 68999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+|+++|+||+.+|..|+++|++|.+|++|++|+|+|+..+.. .. ... .+ ..+
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~--~~-~~~---------------------~~----~~~ 131 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAEN--NA-KEK---------------------HI----DVL 131 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccc--cc-ccc---------------------hh----HHH
Confidence 999999999999999999999999999999999999865421 00 000 00 012
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc---cCCHHHhhccccccccCCC
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK---KINFEKFKSLATVFQKENG 615 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~---~~~~e~l~~~~p~f~~~~~ 615 (814)
+.+|| +||+++.+++.+|..+..++.++.+++++.|+.++++++. ....+|...+ ++|+|++.+++|+|.+ .+
T Consensus 132 ~~~~~-~r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~--~~a~~np~a~~~~~~t~e~~~~~~~i~~~-~~ 207 (393)
T cd00826 132 INKYG-MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGD--IHSDADEYIQFGDEASLDEIAKLRPAFDK-ED 207 (393)
T ss_pred HHHhC-ChhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCC--EEEecCCCCCCCCCCCHHHHhcCCCccCC-CC
Confidence 23445 4555555555555555544555555555555544432111 1122233222 3688999999999854 58
Q ss_pred ccccCCCCccchhhhhhhhcCHHHHHHcCC--CceEEEEEe------eeccCCCC----CCCchHHhHHHHHHHhcCC-C
Q psy12877 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNA--KPLARIIAY------FDAATEPI----DFPIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 616 plt~~d~s~~sDGAAAvvL~s~e~A~~~g~--~p~a~I~g~------~~~~~~p~----~~~~g~~~A~~~~~~~~~~-~ 682 (814)
|||++|||+++|||+|+||+|+++|+++++ +| +||.++ ....++|. .+..+++.|++++|+++|+ .
T Consensus 208 pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~-v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~ 286 (393)
T cd00826 208 FLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKA-REIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGI 286 (393)
T ss_pred CEechhcCCcCCCeEEEEEecHHHHHHcCCcccc-cccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999986 23 355544 43444555 5667889999999999999 5
Q ss_pred cceeEeh
Q psy12877 683 SQFWYDE 689 (814)
Q Consensus 683 sq~~y~e 689 (814)
+|+|+.|
T Consensus 287 ~DID~~E 293 (393)
T cd00826 287 GDLDLIE 293 (393)
T ss_pred HHcCeee
Confidence 7999987
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=293.08 Aligned_cols=277 Identities=16% Similarity=0.058 Sum_probs=204.5
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CcCcceEEEEecccCCCCChHHHHHHHHcCCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMD--KSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~--~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~ 454 (814)
.+.++|||+++|+|++.... ..+++.+|+.+|+++||+|+|++ +++||.+++++.... ...+....++..+|+.+
T Consensus 3 ~~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl~p- 79 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGADP- 79 (498)
T ss_pred CCcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCCCC-
Confidence 46799999999999875421 11489999999999999999999 999999998876432 23346688889999963
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCC-ccCCCC------------ccccc-c-ccc
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG-ETKYGG------------MNLID-G-IVY 519 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~-~~~~~~------------~~~~~-~-~~~ 519 (814)
.+......+|.|+..+|.+|+++|++|++|+||++|+|+++..+...... ...+.. ..... . ...
T Consensus 80 ~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (498)
T PRK08257 80 ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELR 159 (498)
T ss_pred cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhh
Confidence 45566777888999999999999999999999999999987543211100 000000 00000 0 001
Q ss_pred cccccccccccHHHHHHHHHHHcCCCHHH-HHHHH---HHHHHHHHHhhhcCCccccccceeccCCC----CCcceEecc
Q psy12877 520 DGLSDVYNKIHMGNCAENTAKKFNISRDE-QDEYA---LSSYKKSADAYKNNVFSSQIVPVSIPQRK----GKADIIVNE 591 (814)
Q Consensus 520 ~~~~~~~~~~~mg~~Ae~~~~~~Gitre~-~~~~a---~~s~~~A~~a~p~a~~~~ei~p~t~~~~~----~s~~i~~~~ 591 (814)
.++. .....+++.+++||++||+|+|+ +++++ +++|++|.+ ||++++++ |+|+++++ ++|+|
T Consensus 160 ~G~~--~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~-NP~A~~r~---~~t~eevl~~~~~~rmI---- 229 (498)
T PRK08257 160 HGLD--RPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAK-NPHAWIPR---ERSAEEIVTPTPDNRMI---- 229 (498)
T ss_pred cCCC--CcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhh-CHHHhhCC---CCCHHHHhcccCCCCee----
Confidence 1111 11235688999999999999998 44444 489999998 99999987 45777665 45555
Q ss_pred CCccccCCHHHhhccccccccCCCccccCCCCc-cchhhhhhhhcCHHHHHHcC---CCceEEEEEeeeccCCC-----C
Q psy12877 592 DEEYKKINFEKFKSLATVFQKENGTVTAGNAST-LNDGAAACVLMTEEAVRKFN---AKPLARIIAYFDAATEP-----I 662 (814)
Q Consensus 592 D~~~~~~~~e~l~~~~p~f~~~~~plt~~d~s~-~sDGAAAvvL~s~e~A~~~g---~~p~a~I~g~~~~~~~p-----~ 662 (814)
++|+|+++||+ .+|||+|+||+|+++|++++ .+| ++|.|++.+.+.. .
T Consensus 230 ----------------------a~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~-V~i~g~a~~~~~~~~~~r~ 286 (498)
T PRK08257 230 ----------------------AWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRW-VYLHGGADAHDPYDILERP 286 (498)
T ss_pred ----------------------eCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCce-EEEEEEEEeeCcccccccc
Confidence 89999999996 89999999999999999998 445 5999999775421 1
Q ss_pred CCCchH--HhHHHHHHHhcCC-CcceeEeh
Q psy12877 663 DFPIAP--AFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 663 ~~~~g~--~~A~~~~~~~~~~-~sq~~y~e 689 (814)
++...+ ..|++++|+++|+ .+||+++|
T Consensus 287 ~~~~~~~~~~aa~~a~~~AGi~~~Did~~e 316 (498)
T PRK08257 287 DLHRSPAIRAAGRRALALAGLGIDDIDAFD 316 (498)
T ss_pred ccccChHHHHHHHHHHHHhCCCHHHCCEEE
Confidence 223333 3599999999999 47888876
|
|
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=251.85 Aligned_cols=295 Identities=21% Similarity=0.254 Sum_probs=222.6
Q ss_pred CCCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCC
Q psy12877 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 375 ~~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~ 454 (814)
+...+|+|||++.|.|.+. |...+.+.-|++.+|+..||+|+++..++|+..++|.+.+.+... .+.....|+. .
T Consensus 3 ~t~~rvyvvgvgmtkf~kp-g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcg---qraiyevgmt-g 77 (408)
T KOG1406|consen 3 KTKPRVYVVGVGMTKFEKP-GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCG---QRAIYEVGMT-G 77 (408)
T ss_pred CCCceEEEEecceeeecCC-CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccc---hHHHHhcccc-C
Confidence 3445899999999999875 455668888999999999999999999999999999887765532 2333457775 6
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCC-CCcccccccc-cccc-ccccccccH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY-GGMNLIDGIV-YDGL-SDVYNKIHM 531 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~-~~~~~~~~~~-~~~~-~~~~~~~~m 531 (814)
.|.+.||+.|+||..++..|-+-|++|..|+||+.|+|+|.+....... .++. ........+. ..++ ..+.+...+
T Consensus 78 ipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~-~dra~p~dkhi~~m~e~ygl~a~pmaaqmf 156 (408)
T KOG1406|consen 78 IPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKA-ADRALPVDKHISVMSETYGLEAAPMAAQMF 156 (408)
T ss_pred cceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhh-hhccCcchhhHHHHHhhccCCCCcchHHHh
Confidence 7899999999999999999999999999999999999999876532110 0000 0000000000 0111 124445667
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
|..+..||++||..+|++++++.++|++... ||..+|++|. ++|++.+.|-+|
T Consensus 157 gnagkehmekygtk~ehfakiawknhkhsvn-npysqf~dey-------------------------sldqvm~s~~v~- 209 (408)
T KOG1406|consen 157 GNAGKEHMEKYGTKPEHFAKIAWKNHKHSVN-NPYSQFRDEY-------------------------SLDQVMKSPQVV- 209 (408)
T ss_pred hhhHHHHHHHhCCCHHHHhHhhhhccccccC-ChhHhhhhhc-------------------------cHHHHhcchHHH-
Confidence 8999999999999999999999999999998 9999999874 455555566565
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCce-EEEEEeeeccCCCCCCCc-------h---HHhHHHHHHHhcC
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPL-ARIIAYFDAATEPIDFPI-------A---PAFAIPTLLKNGG 680 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~-a~I~g~~~~~~~p~~~~~-------g---~~~A~~~~~~~~~ 680 (814)
+.+|.+.|||.+|||+|.||+||...+++|++-. ++|+|.-+..+.|..+.. | ...+++++|++.+
T Consensus 210 ---dflt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksg 286 (408)
T KOG1406|consen 210 ---DFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSG 286 (408)
T ss_pred ---HHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcC
Confidence 4899999999999999999999999999998643 389999888888766542 1 2358999999999
Q ss_pred CC-cceeEehh-----hhhhchHHHHhccCC
Q psy12877 681 QL-SQFWYDEN-----TTQRLSEEAVCRAGK 705 (814)
Q Consensus 681 ~~-sq~~y~e~-----t~~~l~~~~~~~~~~ 705 (814)
+. ++++..|- +.+.|-.|.+..|++
T Consensus 287 ltpndvqvielhdcfs~nelityealglcpe 317 (408)
T KOG1406|consen 287 LTPNDVQVIELHDCFSANELITYEALGLCPE 317 (408)
T ss_pred CCcccceEEEeecccchhhhhhHHHhcCCCC
Confidence 94 56666552 333344444444444
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=233.83 Aligned_cols=121 Identities=44% Similarity=0.763 Sum_probs=107.8
Q ss_pred CCccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccC
Q psy12877 217 AKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGH 296 (814)
Q Consensus 217 ~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Gh 296 (814)
++|+++|++++..+.+|..++.+|..|++++|+++|++++|||+||+||+|+.+++.++|+||++++|+|++||++++||
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GH 80 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGH 80 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-B
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 297 PIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 297 p~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|+|+||+++++++++||++ +++|++++ |+|||+|.+++||+
T Consensus 81 P~gasG~r~~~~l~~~L~~~~~~~gla~~----------------~~ggG~g~a~ller 123 (123)
T PF02803_consen 81 PLGASGARLVVELAHQLRRRGGRYGLAAI----------------CAGGGQGSAVLLER 123 (123)
T ss_dssp HTTTHHHHHHHHHHHHHHHHTTSEEEEEE----------------EETTTEEEEEEEEE
T ss_pred cccccccchhhhhHHHHHHhchhhhhHHh----------------cccceeeEEEEEEC
Confidence 9999999999999999999 89999998 99999999999984
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-23 Score=234.71 Aligned_cols=248 Identities=21% Similarity=0.202 Sum_probs=179.8
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++++++|+||+.||.+|+++|++|++|++||||+|.+.. +...
T Consensus 151 ~~a~~is~~~gl--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~------------------ 209 (424)
T PRK06333 151 MAAGHVSIRYGF--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RVSL------------------ 209 (424)
T ss_pred HHHHHHHHHhCC--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH------------------
Confidence 356789999999 6999999999999999999999999999999999999998543 1000
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..| ...+.+++.|+.+ +
T Consensus 210 ---------~~f-~~~~~l~~~~~~~--------------------------------------------p--------- 226 (424)
T PRK06333 210 ---------AGF-AAARALSTRFNDA--------------------------------------------P--------- 226 (424)
T ss_pred ---------HHH-HHcccccccCCCC--------------------------------------------C---------
Confidence 000 0000000000000 0
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~ 246 (814)
+ ...+|+...++|.+ ++|||+++||++++.|+++|.+++++|.|++.+++. |...+.+...++++
T Consensus 227 -~--~~~~Pfd~~~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~ 296 (424)
T PRK06333 227 -E--QASRPFDRDRDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLI 296 (424)
T ss_pred -C--cCCCCCCCCCCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHH
Confidence 0 13445554444444 789999999999999999999999999999997652 22234456789999
Q ss_pred HHHHcCCCCCCccEEecCCCchH----HHHHHhh-hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSV----VVLANIK-KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~----~~l~~~e-~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|.|++++. .++..++ .|| ...++++++++..+||+.|++|+..++.++.+|++ ..
T Consensus 297 Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~ 375 (424)
T PRK06333 297 ALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPT 375 (424)
T ss_pred HHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 99999999999999999999997 5555444 445 33579999999999999999999999999999997 22
Q ss_pred CCCccc-------ccc---CccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQ-------FWY---DENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~-------~~~---~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.++... .+. ......+++....++.||.+.+++|+..
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 376 LNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred CCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 222111 000 0111245666777788999999999763
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-23 Score=230.86 Aligned_cols=245 Identities=22% Similarity=0.209 Sum_probs=172.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++++++|+||+.||.+|+++|++|++|++||+|+|.+.. |..
T Consensus 139 ~~a~~is~~~gl--~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~------------------- 196 (407)
T TIGR03150 139 MAAGQISIRYGA--KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PLG------------------- 196 (407)
T ss_pred HHHHHHHHHhCC--CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HHH-------------------
Confidence 366778999999 6999999999999999999999999999999999999998543 110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+..+. +.+... +. +
T Consensus 197 ----------~~~~~~~------------------------------~~ls~~------------------~~------~ 212 (407)
T TIGR03150 197 ----------IAGFAAM------------------------------KALSTR------------------ND------D 212 (407)
T ss_pred ----------HHHHHHh------------------------------CcccCC------------------CC------C
Confidence 0000000 000000 00 0
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.....+|+..+ .++..++|||+++||++++.|++++.+++++|.|++...+ .|...+.+...++++
T Consensus 213 --~~~~~~pfd~~-------~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~ 283 (407)
T TIGR03150 213 --PEKASRPFDKD-------RDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRA 283 (407)
T ss_pred --CCcCCCCCcCC-------CCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHH
Confidence 00022233211 3455578999999999999999999999999999998764 233334456789999
Q ss_pred HHHHcCCCCCCccEEecCCCch----HHHHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFS----VVVLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa----~~~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|+|++++ ..++..+ +.++-...+++++..+..+|||.|++|+.++++++++|++ ..
T Consensus 284 Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~ 363 (407)
T TIGR03150 284 ALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPT 363 (407)
T ss_pred HHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 9999999999999999999999 4444444 5556544445555555555999999999999999999997 22
Q ss_pred CCCccc---------cccCccccccccceeEEecCCcceeEEE
Q psy12877 318 KGQLSQ---------FWYDENTTQRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 318 ~gl~~~---------~~~~~~~~~~~~~~~~~~ggG~g~a~ll 351 (814)
.++... .|.......+++....++.||.+++++|
T Consensus 364 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 364 INLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred CCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEe
Confidence 222111 0112222345666777778899988887
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=228.57 Aligned_cols=248 Identities=20% Similarity=0.166 Sum_probs=179.5
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++++.+|+||+.||..|+++|++|++|+|||||+|.++....
T Consensus 140 ~~a~~is~~~gl--~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~-------------------- 197 (411)
T PRK07314 140 MAAGHVSIRYGA--KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLG-------------------- 197 (411)
T ss_pred HHHHHHHHHhCC--CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHH--------------------
Confidence 366789999998 6899999999999999999999999999999999999997553100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+..+.+ .+.. + ..+++.
T Consensus 198 ----------~~~~~~~~------------------------------~ls~---------~-----~~~p~~------- 216 (411)
T PRK07314 198 ----------IAGFAAAR------------------------------ALST---------R-----NDDPER------- 216 (411)
T ss_pred ----------HHHHHHhc------------------------------cccC---------C-----CCCCCc-------
Confidence 00000000 0000 0 000111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
..+|+.. ..+++.++|||+++||++++.|++++.+++++|+|++...+ +|...+.+...++++
T Consensus 217 -----~~~pfd~-------~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~ 284 (411)
T PRK07314 217 -----ASRPFDK-------DRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKL 284 (411)
T ss_pred -----CcCCCcC-------CCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHH
Confidence 1123321 24677799999999999999999999999999999998764 344455567889999
Q ss_pred HHHHcCCCCCCccEEecCCCch-HHHHHHh----hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFS-VVVLANI----KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa-~~~l~~~----e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|.|++++ ......+ +.++....++++++.+..+|||.|++|+..++.++.+|++ ..
T Consensus 285 Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~ 364 (411)
T PRK07314 285 ALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPT 364 (411)
T ss_pred HHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 9999999999999999999988 3333322 3345444567777777778999999999999999999997 22
Q ss_pred CCCccc---------cccCccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQ---------FWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~---------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.++... .+.......+++....++.||.+.+++|++.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 365 INLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred CCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEecC
Confidence 222111 1112222356778888889999999999863
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=213.25 Aligned_cols=248 Identities=18% Similarity=0.181 Sum_probs=180.1
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++...|+ ..|.+++.++|+||+.||..|+++|++|++|++||||+|.... |..
T Consensus 68 n~~a~~is~~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~~------------------ 126 (342)
T PRK14691 68 NLAAGHVSIKHHF--KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TVS------------------ 126 (342)
T ss_pred hHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHH------------------
Confidence 3588899999999 6999999999999999999999999999999999999997432 100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+......++.. .. +. .+++
T Consensus 127 ---------------------------------~~~f~~~~~ls---~~-~~-----------------~~p~------- 145 (342)
T PRK14691 127 ---------------------------------LAGFAAARALS---TH-FN-----------------STPE------- 145 (342)
T ss_pred ---------------------------------HHHHHHhhhhh---cC-CC-----------------CCCC-------
Confidence 00000000000 00 00 0011
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~ 245 (814)
..++|+..+++|.+ ++|||+++||++++.|+++|.+|+++|+|++..++. |...+.++..+++
T Consensus 146 -----~~~rPFd~~r~G~v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~ 213 (342)
T PRK14691 146 -----KASRPFDTARDGFV-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMK 213 (342)
T ss_pred -----cCCCCCCCCCCCcc-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 13455654444555 789999999999999999999999999999998775 4445677789999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++||+++|||++|.|++++.. +...+ +.||-. .++.++.-+-.+||..|++|+..++.++..|+. .
T Consensus 214 ~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp 292 (342)
T PRK14691 214 IALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPA 292 (342)
T ss_pred HHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCC
Confidence 9999999999999999999999963 34333 334532 345555566678999999999999999999997 2
Q ss_pred CCCCcc-------ccccCcc---ccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLS-------QFWYDEN---TTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~-------~~~~~~~---~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...+.. +.+...+ ...++++.+.++.||+.++++|++
T Consensus 293 t~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 293 TLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred cCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 112211 1111111 124677888888899999999976
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-22 Score=224.39 Aligned_cols=248 Identities=18% Similarity=0.173 Sum_probs=178.1
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++++++|+||+.||.+|+++|++|++|++||||+|.+.. |...
T Consensus 146 ~~a~~is~~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~~------------------ 204 (421)
T PTZ00050 146 MAAGLVAIKHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVSF------------------ 204 (421)
T ss_pred HHHHHHHHHhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHHH------------------
Confidence 477889999999 6999999999999999999999999999999999999998542 2100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
++ +.+ .+.+.... ..+++
T Consensus 205 -----------~~------------------------f~~------~~~l~~~~-------------~~~p~-------- 222 (421)
T PTZ00050 205 -----------AG------------------------FSR------MRALCTKY-------------NDDPQ-------- 222 (421)
T ss_pred -----------HH------------------------HHh------hhccccCc-------------CCCCC--------
Confidence 00 000 00000000 00000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
...+|+..+.+|. .++|||+++||++++.|+++|.+++++|+|++.+.+ .|...+.++..++++
T Consensus 223 ----~~~~pfd~~~~G~-------~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~ 291 (421)
T PTZ00050 223 ----RASRPFDKDRAGF-------VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMEN 291 (421)
T ss_pred ----ccCCCCcCCCCCE-------eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHH
Confidence 1223443332343 368999999999999999999999999999999876 344455677899999
Q ss_pred HHHH-cCCCCCCccEEecCCCchHH----H-HHHhhhcCCCC-CCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 247 LLKN-GGVAKQDVALWEINEAFSVV----V-LANIKKLDIDP-SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 247 al~~-aGl~~~DID~~e~~d~fa~~----~-l~~~e~lg~~~-~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
+|++ +|++++|||++|+|++++.. + ....+.+|-.. +++.++..+-.+||+.|++|+..++.++..|+.
T Consensus 292 Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ip 371 (421)
T PTZ00050 292 ALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIP 371 (421)
T ss_pred HHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccC
Confidence 9999 99999999999999999822 2 23334455432 567777888889999999999999999999997
Q ss_pred CCCCCccc-----cccCccc------cccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQ-----FWYDENT------TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~-----~~~~~~~------~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...++... ..+.... ..+++..+.++.||...+++|++
T Consensus 372 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 372 PTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 22222111 0111111 23677788888899999999975
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-21 Score=218.58 Aligned_cols=247 Identities=19% Similarity=0.177 Sum_probs=172.7
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++|+++|+||+.||..|+++|++|++|++||||+|.+.. |.
T Consensus 162 ~~a~~is~~~gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~-------------------- 218 (437)
T PLN02836 162 MAAGHVSIRYGF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-AL-------------------- 218 (437)
T ss_pred HHHHHHHHHhCC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HH--------------------
Confidence 467789999998 6999999999999999999999999999999999999997432 10
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
...+. ...++.. ..+ . .+
T Consensus 219 ---------~~~~~----------------------~~~~~l~---~~~-~---------------------------~~ 236 (437)
T PLN02836 219 ---------SIAGF----------------------SRSRALS---TKF-N---------------------------SC 236 (437)
T ss_pred ---------HHHHH----------------------HHhhhhh---ccc-C---------------------------CC
Confidence 00000 0000100 000 0 00
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~ 246 (814)
.+ ...+|+... .++..++|||+++||++++.|+++|.+++++|.|++.+++. |...+.+...++++
T Consensus 237 p~--~~~~pfd~~-------~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~ 307 (437)
T PLN02836 237 PT--EASRPFDCD-------RDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTR 307 (437)
T ss_pred cc--cccCCcccC-------CCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHH
Confidence 00 123344322 35566899999999999999999999999999999987652 22223345679999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHH-HhhhcCCC----CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKLDID----PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~lg~~----~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
||+++||+++|||++|.|++++.. +.. ..+.+|-. .-+++...|.+ ||+.|++|+..++.++.+|++
T Consensus 308 Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~--GH~~~AsG~~~li~~~l~l~~~~ 385 (437)
T PLN02836 308 ALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGAT--GHLLGAAGAVEAIFSVLAIHHGI 385 (437)
T ss_pred HHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccc--cccHHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999842 222 22334422 13566666654 999999999999999999997
Q ss_pred --CCCCCccc-----cccCc-----cccccccceeEEecCCcceeEEEecC
Q psy12877 316 --GQKGQLSQ-----FWYDE-----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g~~gl~~~-----~~~~~-----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...++... +.+.+ ....+++..+.++.||++++++|+.+
T Consensus 386 ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 386 APPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred cCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 22222111 01111 12245677777888999999999864
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=206.78 Aligned_cols=239 Identities=20% Similarity=0.212 Sum_probs=174.6
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.+++.++|+||+.||.+|+++|++|++|++||||+|..-. |.
T Consensus 124 ~~a~~ia~~~~~--~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~-------------------- 180 (381)
T PRK05952 124 QAAIAAARQIGT--QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PL-------------------- 180 (381)
T ss_pred HHHHHHHHHhCC--CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HH--------------------
Confidence 478899999999 6899999999999999999999999999999999999986221 10
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
....+.. .+.+ +
T Consensus 181 ---------------------------------~~~~~~~------~~~l-----------------------------s 192 (381)
T PRK05952 181 ---------------------------------TLAGFQQ------MGAL-----------------------------A 192 (381)
T ss_pred ---------------------------------HHHHHHh------cCCc-----------------------------C
Confidence 0000000 0000 0
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~ 246 (814)
. ...+|+..+++|.+ ++|||+++||++++.|++++.+++++|.|++.+.+. |...+.+...++++
T Consensus 193 ~---~~~rPfd~~r~G~v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~ 262 (381)
T PRK05952 193 K---TGAYPFDRQREGLV-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQ 262 (381)
T ss_pred C---CCCCCCCCCCCCcc-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHH
Confidence 0 02345443333444 789999999999999999999999999999987652 33334456789999
Q ss_pred HHHHcCCCCCCccEEecCCCchH----HHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSV----VVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
+|+++|++++|||++|.|.+.+. .+...++.+ ..+++++++.+..+||+.+++|+..++.+++.|++ ...
T Consensus 263 Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~--fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~ 340 (381)
T PRK05952 263 CLARSGLTPEDIDYIHAHGTATRLNDQREANLIQAL--FPHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCV 340 (381)
T ss_pred HHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHH--cCCCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999999999999999987663 233333333 12467888888899999999999999999999997 211
Q ss_pred CCcc----cccc--CccccccccceeEEecCCcceeEEEec
Q psy12877 319 GQLS----QFWY--DENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 319 gl~~----~~~~--~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++.. +.+. ......+++..+.++.||++++++|++
T Consensus 341 ~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 341 GLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred CCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEeC
Confidence 2111 0011 111224677788888899999999863
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-20 Score=210.81 Aligned_cols=248 Identities=19% Similarity=0.230 Sum_probs=175.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+ ..|.++++++|+|++.||..|+++|++|++|++||||+|..... ..
T Consensus 141 n~~a~~is~~~gl--~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~-~~------------------ 199 (414)
T PRK08722 141 NMIAGNLSIMRGL--RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTP-LG------------------ 199 (414)
T ss_pred cHHHHHHHHHhCC--CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-HH------------------
Confidence 3588899999999 69999999999999999999999999999999999999985431 00
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+..|. . .+.+.. +. .+++
T Consensus 200 ------------------------------~~~f~-----~------~~~ls~---------~~-----~~p~------- 217 (414)
T PRK08722 200 ------------------------------MAGFG-----A------AKALST---------RN-----DEPQ------- 217 (414)
T ss_pred ------------------------------HHHHH-----H------cCCccc---------CC-----CCCc-------
Confidence 00000 0 000000 00 0001
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~ 245 (814)
..++|+..+++|.+ ++|||+++||++++.|+++|.+++++|.|++.+++ .|...+.+...+++
T Consensus 218 -----~~~rpfd~~~~G~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~ 285 (414)
T PRK08722 218 -----KASRPWDKDRDGFV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAME 285 (414)
T ss_pred -----cccCcCcCCCCceE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHH
Confidence 13455554444555 77999999999999999999999999999999765 23333444578999
Q ss_pred HHHHHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCC-CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSV----VVLANI-KKLDID-PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~-~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
++|+++||+++|||++|.|++++. .+...+ +.||-. .+++.++.-+-.+||..+++|+..++.++++|++
T Consensus 286 ~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ip 365 (414)
T PRK08722 286 AAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVP 365 (414)
T ss_pred HHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccC
Confidence 999999999999999999999885 233333 345532 2345455555568999999999999999999997
Q ss_pred CCCCCccc-----cccCccc-----cccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQ-----FWYDENT-----TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~-----~~~~~~~-----~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
....+... +.+.+.+ ..+++..+.++.||++.+++|++
T Consensus 366 p~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 366 PTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 22221110 0111111 24667777888899999999964
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=200.61 Aligned_cols=247 Identities=21% Similarity=0.227 Sum_probs=186.0
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeecc-CCCCCCccccCcccCCCCcccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES-MSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~-~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
...+..+++..|+ ..|.+++..+|+||..||.+|+++|+.|++|+|||||.|. ++..
T Consensus 139 ~~~a~~vs~~~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~-------------------- 196 (412)
T COG0304 139 NLAAGNVAIVFGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPL-------------------- 196 (412)
T ss_pred chHHHHHHHHhCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHH--------------------
Confidence 3578899999999 6999999999999999999999999999999999999987 3221
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
.+..|. -.+|.... .+.++
T Consensus 197 ------------------------------~i~gF~---am~Alst~--------------------------nd~p~-- 215 (412)
T COG0304 197 ------------------------------GIAGFE---AMRALSTR--------------------------NDDPE-- 215 (412)
T ss_pred ------------------------------HHHHHH---HHHHhccC--------------------------CCCcc--
Confidence 111111 01111000 00111
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAI 244 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~ 244 (814)
..+||+.++++|++ +++||+++||++.|+|+++|.+++++|.|++.+++ .|...+.+...++
T Consensus 216 ------~asrPfd~~RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am 282 (412)
T COG0304 216 ------KASRPFDKNRDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAM 282 (412)
T ss_pred ------ccCCCCCCCCCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHH
Confidence 14667776667777 78999999999999999999999999999999876 5666678889999
Q ss_pred HHHHHHcCCCCCCccEEecCCCch----HHHHHHhhh-cCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFS----VVVLANIKK-LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa----~~~l~~~e~-lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
++||+++|++++||||+..|...+ ..+...++. ||-...++-++..+-.+||++|++|+...+-.++.|+.
T Consensus 283 ~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ip 362 (412)
T COG0304 283 RAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIP 362 (412)
T ss_pred HHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999999998866 334444443 45444556678888889999999999999999999996
Q ss_pred CCCCCccc------cccCcccc----ccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQ------FWYDENTT----QRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~------~~~~~~~~----~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
....+... ..|.++.. -++++.+.++.||.+.++++.+
T Consensus 363 pt~n~~~~dp~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 363 PTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred CCCCcCCCCcccccccccCCcccccceeEEEecccccCCcceEEEEec
Confidence 22222211 12233322 4567777888899999998864
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=205.48 Aligned_cols=247 Identities=15% Similarity=0.131 Sum_probs=172.2
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++++.+|+|++.||..|+++|++|++|+|||+|.+..-. +..
T Consensus 145 ~~a~~ia~~lgl--~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~~------------------- 202 (410)
T PRK07103 145 DLVGLCSEQFGI--RGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YWE------------------- 202 (410)
T ss_pred HHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHH-------------------
Confidence 477788999999 5799999999999999999999999999999999999874211 000
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+ + .. .+.+. .+.+ ..+
T Consensus 203 ----------~~~-------------------~-----~~------~~~l~-------------------~~~~---~~~ 220 (410)
T PRK07103 203 ----------CQA-------------------L-----RS------LGAMG-------------------SDRF---ADE 220 (410)
T ss_pred ----------HHH-------------------H-----HH------ccccc-------------------cCcc---CCC
Confidence 000 0 00 00000 0000 000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC---CCCCcHHHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI---DFPIAPAFAIPTLL 248 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~---~~~~~~~~a~~~al 248 (814)
.+ ..++|+... .++..++|||+++||++++.|++++.+++++|.|++...+... ....+...+++++|
T Consensus 221 p~--~~~rPfd~~-------~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al 291 (410)
T PRK07103 221 PE--AACRPFDQD-------RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAAL 291 (410)
T ss_pred cc--cCcCCCCCC-------CCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHH
Confidence 00 023343322 4556689999999999999999999999999999999765222 12233467999999
Q ss_pred HHcCCCCCCccEEecCCCchHH----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCCCC
Q psy12877 249 KNGGVAKQDVALWEINEAFSVV----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQ 320 (814)
Q Consensus 249 ~~aGl~~~DID~~e~~d~fa~~----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl 320 (814)
+++|++++|||+++.|.+++.. +...+...+..+-||+...+.+ ||+.|++|+..++.++++|++ ...++
T Consensus 292 ~~Agi~~~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~s~k~~~--Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~ 369 (410)
T PRK07103 292 RRAGLGPEDIDYVNPHGTGSPLGDETELAALFASGLAHAWINATKSLT--GHGLSAAGIVELIATLLQMRAGFLHPSRNL 369 (410)
T ss_pred HHcCCCHHHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEECCCccc--ccCchhhhHHHHHHHHHHHhCCeeCCCCCC
Confidence 9999999999999999999863 3333422232234677777776 999999999999999999997 22222
Q ss_pred c-----cccccCcc---ccccccceeEEecCCcceeEEEec
Q psy12877 321 L-----SQFWYDEN---TTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 321 ~-----~~~~~~~~---~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
. .+.|-... ...+++..+.++.||...+++|++
T Consensus 370 ~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 370 DEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEeC
Confidence 1 11222111 124677788888899999999974
|
|
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=194.69 Aligned_cols=247 Identities=21% Similarity=0.218 Sum_probs=183.4
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++...|| ..|..++.++|++|..+|..|++.|+.|++|++|+||.|+.-. |.
T Consensus 165 M~ag~vsm~~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-Pl-------------------- 221 (440)
T KOG1394|consen 165 MAAGYVSMKYGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PL-------------------- 221 (440)
T ss_pred cccchhhhhhcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-ch--------------------
Confidence 367799999999 6999999999999999999999999999999999999998533 11
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+|-.++.||..-.++ .|
T Consensus 222 -------------------------------slaGF~r~RALSt~nd--------------------------~P----- 239 (440)
T KOG1394|consen 222 -------------------------------SLAGFSRARALSTRND--------------------------NP----- 239 (440)
T ss_pred -------------------------------hhhhHHHHHHhhhcCC--------------------------Cc-----
Confidence 0222334444321100 00
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
=..+||+..+++|++ +++|++.+||++.|+|+++|.+++|+|+||+.+++ +|..-+.+...++++
T Consensus 240 ---~~aSRPfD~~RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~r 309 (440)
T KOG1394|consen 240 ---QKASRPFDKKRDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMER 309 (440)
T ss_pred ---cccCCCCccCCCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHH
Confidence 025778877777887 88999999999999999999999999999999877 677788899999999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----H-HHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----V-LANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~-l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|++|||.|+||||++.|-..+.. + .+.-+.|+-.....-++.-+-++||-+||+|+...+-.+..++. ..
T Consensus 310 aL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lppt 389 (440)
T KOG1394|consen 310 ALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPT 389 (440)
T ss_pred HHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCc
Confidence 999999999999999999887743 1 22222233222221244444456999999999999999999986 11
Q ss_pred -------CCCcc----ccccC--ccccccccceeEEecCCcceeEEEec
Q psy12877 318 -------KGQLS----QFWYD--ENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 -------~gl~~----~~~~~--~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
-++-. ..|.. ...+.+++...+++.||.+++++|.+
T Consensus 390 lNlen~d~~~d~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~ 438 (440)
T KOG1394|consen 390 LNLENPDPGVDLDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAK 438 (440)
T ss_pred ccccCCCccccccccccccccccccccceEEEecccccCCcchhheeee
Confidence 11111 00111 11236688899999999999988853
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=204.32 Aligned_cols=245 Identities=20% Similarity=0.165 Sum_probs=174.5
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.++++.+|+ ..|.++++++|+|++.||.+|+++|++|++|++||||+|.......
T Consensus 149 ~~a~~is~~~~~--~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~-------------------- 206 (418)
T PRK07910 149 GPAAAVGLERHA--KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVP-------------------- 206 (418)
T ss_pred cHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHH--------------------
Confidence 377888999998 6899999999999999999999999999999999999998543100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNV-FSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~-~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+. .+.+ .+. +... ...++
T Consensus 207 --------------------------------~~--~f~~------~~~~ls~~--------------~~~~~------- 225 (418)
T PRK07910 207 --------------------------------IA--GFAQ------MRIVMSTN--------------NDDPA------- 225 (418)
T ss_pred --------------------------------HH--HHHh------cCCccccC--------------CCCCC-------
Confidence 00 0000 000 0000 00011
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~ 245 (814)
...+|+...++|.+ ++||++++||++++.|+++|.+++++|+|++.+++. |...+.+...+++
T Consensus 226 -----~~~rPFd~~~~G~v-------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~ 293 (418)
T PRK07910 226 -----GACRPFDKDRDGFV-------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMT 293 (418)
T ss_pred -----CCcCCCcCCCCCEe-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHH
Confidence 12445543334555 779999999999999999999999999999997753 3334455678999
Q ss_pred HHHHHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSV----VVLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++|++++|||++|.|.+.+. .+...+ +.||-.. +.++.-+-.+||+.|++|+..++.++.+|+. .
T Consensus 294 ~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~--~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp 371 (418)
T PRK07910 294 RAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHR--PAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPP 371 (418)
T ss_pred HHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCC--CceeCccccccccHHHHHHHHHHHHHHHHhcCccCC
Confidence 999999999999999999999883 233333 4455322 2344556668999999999999999999997 2
Q ss_pred CCCCccc----c-cc----CccccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQ----F-WY----DENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~----~-~~----~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...+... . .+ ......+++..+.++.||.+.+++|++
T Consensus 372 ~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 372 TLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 2122111 0 00 111234677888889999999999975
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.7e-19 Score=201.76 Aligned_cols=246 Identities=17% Similarity=0.179 Sum_probs=173.4
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
+.+.+++..+|+ ..|.++++++|+|++.||..|+++|++|++|++||||+|.... |..
T Consensus 269 ~~a~~ia~~~gl--~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~------------------- 326 (540)
T PLN02787 269 MGSAMLAMDLGW--MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIG------------------- 326 (540)
T ss_pred HHHHHHHHHhCC--CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHH-------------------
Confidence 356788899999 6999999999999999999999999999999999999997422 110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+..|. ..++.. ++. .+++
T Consensus 327 -----------------------------~~~f~---~~~aLS-~~~---------------------~~p~-------- 344 (540)
T PLN02787 327 -----------------------------LGGFV---ACRALS-QRN---------------------DDPT-------- 344 (540)
T ss_pred -----------------------------HHHHH---HHHHhh-ccC---------------------CCcc--------
Confidence 00000 000000 000 0000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~ 246 (814)
..++|+..+++|.+ ++|||+++||++.+.|+++|.+++++|.|++.+.+. |...+.+...++++
T Consensus 345 ----~~~rPFD~~rdGfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~ 413 (540)
T PLN02787 345 ----KASRPWDMNRDGFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEK 413 (540)
T ss_pred ----cccCCcccCCCCcc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHH
Confidence 13556654445665 779999999999999999999999999999997753 22333455789999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
||+++|++++|||+++.|.+-+.. +...+ +.||-. .++.++.-+-.+||+.|++|+..++.++.+|+. ..
T Consensus 414 AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~-~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt 492 (540)
T PLN02787 414 ALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQN-PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPN 492 (540)
T ss_pred HHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCC-CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCC
Confidence 999999999999999999887642 33333 345532 233344445558999999999999999999996 22
Q ss_pred CCCccc------cccCccc----cccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQ------FWYDENT----TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~------~~~~~~~----~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
.++... .+...++ ..++++.+.++.||.+++++|++
T Consensus 493 ~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 493 INLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 222110 0111111 24567788889999999999975
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.6e-19 Score=198.64 Aligned_cols=246 Identities=23% Similarity=0.258 Sum_probs=171.2
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+ ..|.++++.+|+|++.||..|+++|++|++|.+||+|+|.++. |+..
T Consensus 138 ~~~a~~ia~~lgl--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p~~~----------------- 197 (406)
T cd00834 138 NMAAGQVAIRLGL--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-PLTL----------------- 197 (406)
T ss_pred cHHHHHHHHHhCC--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-HHHH-----------------
Confidence 4578899999999 5799999999999999999999999999999999999998653 1100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
++ ..+ .+.+...- ..++.
T Consensus 198 ------------~~------------------------~~~------~~~l~~~~--------------~~p~~------ 215 (406)
T cd00834 198 ------------AG------------------------FAA------LRALSTRN--------------DDPEK------ 215 (406)
T ss_pred ------------HH------------------------HHh------cCCcCCCC--------------CCCcc------
Confidence 00 000 00000000 00000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~ 245 (814)
..+|+..+ .++..++|||+++||++.+.|++++.+++++|.|++...+ .|...+.+...+++
T Consensus 216 ------~~~pf~~~-------~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~ 282 (406)
T cd00834 216 ------ASRPFDKD-------RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMR 282 (406)
T ss_pred ------CCCCCCCC-------CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHH
Confidence 11222211 2345588999999999999999999999999999998654 22223455678999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++|++++|||+++.|.+.+.. +...+ +.++-..++++++..+-.+||+.+++|+..++.++++|++ .
T Consensus 283 ~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~ 362 (406)
T cd00834 283 AALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPP 362 (406)
T ss_pred HHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCC
Confidence 9999999999999999999987742 23223 3334433466666666677999999999999999999997 1
Q ss_pred CCCCcc------ccccC---ccccccccceeEEecCCcceeEEE
Q psy12877 317 QKGQLS------QFWYD---ENTTQRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 317 ~~gl~~------~~~~~---~~~~~~~~~~~~~~ggG~g~a~ll 351 (814)
..++.. +.+-. .+...+++..+.++.||.+++++|
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 363 TINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 212111 11100 111246777888888999988875
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-19 Score=188.58 Aligned_cols=205 Identities=24% Similarity=0.282 Sum_probs=169.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+.+++..+|++ .+|.++++.+|+|++.+|..|.++|++|++|.+||+|+|.
T Consensus 43 ~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~------------------------ 97 (254)
T cd00327 43 FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE------------------------ 97 (254)
T ss_pred ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce------------------------
Confidence 467889999999998 8999999999999999999999999999999999998876
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
T Consensus 98 -------------------------------------------------------------------------------- 97 (254)
T cd00327 98 -------------------------------------------------------------------------------- 97 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC----CCCCcHHHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI----DFPIAPAFAIP 245 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~----~~~~~~~~a~~ 245 (814)
+.++|||+|+||++++.+++++.+|+++|.++....+.+. ........+++
T Consensus 98 -------------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 152 (254)
T cd00327 98 -------------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAAR 152 (254)
T ss_pred -------------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHH
Confidence 0135999999999999999999999999999987655433 23345678999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCC---cccCCCCccccCCCCChHHHHHHHHHHHHHcCCCCCcc
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSK---VNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQLS 322 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~---vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g~~gl~~ 322 (814)
++|+++|++++|||++++|++++.....+.+.++++.++ +|+.++...+||+.+++|...+.+++.+++.+ . +..
T Consensus 153 ~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~-~-~~~ 230 (254)
T cd00327 153 KALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE-F-IPP 230 (254)
T ss_pred HHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC-C-cCC
Confidence 999999999999999999999999888888989887654 58899999999999999999999999999841 0 000
Q ss_pred ccccCccccccccceeEEecCCcceeEEE
Q psy12877 323 QFWYDENTTQRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~ggG~g~a~ll 351 (814)
. ....+....+.+++||.+.+++|
T Consensus 231 ~-----~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 231 T-----PREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred C-----CCCcCEEEEeeEcCCCcceEEEC
Confidence 0 01112334455777888888765
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=197.51 Aligned_cols=246 Identities=17% Similarity=0.124 Sum_probs=172.2
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+. ..|.++++++|+||+.||..|+++|++|++|++||+|+|.++ |....
T Consensus 138 ~~~a~~is~~~gl~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~~---------------- 198 (407)
T cd00828 138 NTVAGWVNILLLSS-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGLS---------------- 198 (407)
T ss_pred chHHHHHHHHhCcC-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHHH----------------
Confidence 55888999999994 589999999999999999999999999999999999999976 32000
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.|. + .+.+.. ++.
T Consensus 199 --------------------------------~f~-----~------~~~ls~-------------------~~~----- 211 (407)
T cd00828 199 --------------------------------GFA-----N------MGALST-------------------AEE----- 211 (407)
T ss_pred --------------------------------HHH-----H------cCCCCC-------------------CCC-----
Confidence 000 0 000000 000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC----CCcHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF----PIAPAFAIPT 246 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~----~~~~~~a~~~ 246 (814)
+.-...+|+. ...++..++|||+++||++++.|+++|.+++++|.|++...+..... +.+...++++
T Consensus 212 --~~~~~~~pfd-------~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~ 282 (407)
T cd00828 212 --EPEEMSRPFD-------ETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRT 282 (407)
T ss_pred --CCCcccCCCc-------CCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHH
Confidence 0001223333 23455668999999999999999999999999999999877643322 3456789999
Q ss_pred HHHHcCCCCCCccEEecCCCchH----HHHHHhh-hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSV----VVLANIK-KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~----~~l~~~e-~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|.|++.+. .+...++ .++-...++.++.-+-.+||..+++|+..++.++..|++ ..
T Consensus 283 Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~ 362 (407)
T cd00828 283 ALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPT 362 (407)
T ss_pred HHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCC
Confidence 99999999999999999999884 3333333 333322333444444557999999999999999999997 22
Q ss_pred CCCccc-----cccC--ccc-c---ccccceeEEecCCcceeEEE
Q psy12877 318 KGQLSQ-----FWYD--ENT-T---QRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 318 ~gl~~~-----~~~~--~~~-~---~~~~~~~~~~ggG~g~a~ll 351 (814)
..+... +.+. ..+ . .+++..+.++.||.+++++|
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 363 ANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 222111 0000 011 1 26777888888999988875
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=195.04 Aligned_cols=246 Identities=15% Similarity=0.136 Sum_probs=170.4
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|+++++.+|+|++.||.+|+++|++|++|.|||+|+|..-. |
T Consensus 153 ~~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~--------------------- 208 (425)
T PRK06501 153 SIADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-A--------------------- 208 (425)
T ss_pred HHHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-H---------------------
Confidence 477789999999 6899999999999999999999999999999999999995211 0
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+.+..+... . .+.... ..++
T Consensus 209 ---------------------------~~~~~~~~~---~--------~ls~~~--------------~~~~-------- 228 (425)
T PRK06501 209 ---------------------------EALIRFSLL---S--------ALSTQN--------------DPPE-------- 228 (425)
T ss_pred ---------------------------HHHHHHHHh---h--------ccccCC--------------CCCC--------
Confidence 000011000 0 000000 0000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-----CCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~~~~~a~~~ 246 (814)
...+|+..+++|. .++|||+++||++++.|++++.+++++|.|++...+.... .+.+...++++
T Consensus 229 ----~~~rpfd~~r~G~-------v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~ 297 (425)
T PRK06501 229 ----KASKPFSKDRDGF-------VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRA 297 (425)
T ss_pred ----cccCCCCCCCCCe-------eeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHH
Confidence 1344554333343 3789999999999999999999999999999987653221 12234679999
Q ss_pred HHHHcCCCCCCccEEecCCCchHHH----HHHh-hhcCCC--CCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC---
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVVV----LANI-KKLDID--PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG--- 316 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~~----l~~~-e~lg~~--~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g--- 316 (814)
+|+++|++++|||+++.|++.+... ...+ +.+|-. .-|||..+|.+ ||+.+++|+..++.++.+|+++
T Consensus 298 AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~--Gh~~~AsG~~~~~~~~l~l~~~~ip 375 (425)
T PRK06501 298 ALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMI--GHTLTAAGAVEAVFSLLTIQTGRLP 375 (425)
T ss_pred HHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCccc--CCCchhhhHHHHHHHHHHHhcCcCC
Confidence 9999999999999999999987542 2222 233421 12688888877 9999999999999999999971
Q ss_pred -CCCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 317 -QKGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 -~~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
..++... +.+.+ ....+.+..+.++.||.+.+++|+++
T Consensus 376 p~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~ 423 (425)
T PRK06501 376 PTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAE 423 (425)
T ss_pred CcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecC
Confidence 1122110 01111 11234555666788999999999864
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=192.18 Aligned_cols=242 Identities=17% Similarity=0.170 Sum_probs=170.1
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.++++++|+||+.||..|+++|++|++|++||||+|.++....
T Consensus 142 ~~a~~is~~~~~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~-------------------- 199 (405)
T PRK09116 142 TTAVNVGLFFGL--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEA-------------------- 199 (405)
T ss_pred HHHHHHHHHhCC--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHH--------------------
Confidence 378889999999 6999999999999999999999999999999999999997532100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+ ++.+ ++. . ... ..++
T Consensus 200 -----------~~----------------f~~l------~~~---~--~~~-----------------~~~~-------- 216 (405)
T PRK09116 200 -----------AV----------------FDTL------FAT---S--TRN-----------------DAPE-------- 216 (405)
T ss_pred -----------HH----------------HHHh------hhh---c--cCC-----------------CCCC--------
Confidence 00 0000 000 0 000 0000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC---CCcHHHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF---PIAPAFAIPTLL 248 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~---~~~~~~a~~~al 248 (814)
..++|+..+++|.+ ++|||+++||++++.|+++|.+++++|.|++.+.+..... ..+...+++++|
T Consensus 217 ----~~~rPfd~~~~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL 285 (405)
T PRK09116 217 ----LTPRPFDANRDGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELAL 285 (405)
T ss_pred ----CCCCCCcCCCCCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHH
Confidence 13445554444555 7799999999999999999999999999999987643221 233467999999
Q ss_pred HHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCCC
Q psy12877 249 KNGGVAKQDVALWEINEAFSV----VVLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQKG 319 (814)
Q Consensus 249 ~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~g 319 (814)
+++|++++|||+++.|.+.+. .+...+ +.||- ++.++.-+-.+||..|++|+..++.++.+|+. ....
T Consensus 286 ~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~ 362 (405)
T PRK09116 286 KDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLN 362 (405)
T ss_pred HHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCC
Confidence 999999999999999998773 333333 44442 23344444558999999999999999999997 1111
Q ss_pred Cccc------cccCcc----ccccccceeEEecCCcceeEEEe
Q psy12877 320 QLSQ------FWYDEN----TTQRLSEEVVCRAGKEGSIALIS 352 (814)
Q Consensus 320 l~~~------~~~~~~----~~~~~~~~~~~~ggG~g~a~ll~ 352 (814)
+... ..|.+. ...+++..+.++.||++++++|.
T Consensus 363 ~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 363 LTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 1110 011211 12457778888999999999883
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.5e-18 Score=193.91 Aligned_cols=242 Identities=17% Similarity=0.127 Sum_probs=167.8
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
..+.+++..+|+ ..|.++++.+|+|++.||..|+++|++|++|+|||+|+|.+.....
T Consensus 148 ~~a~~i~~~lgl--~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~-------------------- 205 (424)
T smart00825 148 FIANRISYFFDL--RGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDT-------------------- 205 (424)
T ss_pred HHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHH--------------------
Confidence 467789999999 5799999999999999999999999999999999999998543100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+..+. ..+.+ .++.
T Consensus 206 -----------------------------~~~~~-----------~~~~l-------------------~~~~------- 219 (424)
T smart00825 206 -----------------------------FVGFS-----------RAGML-------------------SPDG------- 219 (424)
T ss_pred -----------------------------HHHHh-----------hcCCC-------------------CCCC-------
Confidence 00000 00010 0000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-----CCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~~~~~a~~~ 246 (814)
..+|+.. ..++..++|||+++||++++.|++++.+++++|.|++...+.... ...+...++++
T Consensus 220 -----~~~pf~~-------~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~ 287 (424)
T smart00825 220 -----RCKTFDA-------DADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQ 287 (424)
T ss_pred -----CCCCCCC-------CCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHH
Confidence 1222221 134556899999999999999999999999999999987653321 12234679999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHH-HhhhcCCCC---CCcccCCCCccccCCCCChHHHHHHHHHHHHHcC--
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG-- 316 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g-- 316 (814)
+|+++|++++|||+++.|++++.. +.. ..+.+|... .++.+++-+-.+||+.+++|+..+++++.+|+.+
T Consensus 288 al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 367 (424)
T smart00825 288 ALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTI 367 (424)
T ss_pred HHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCC
Confidence 999999999999999999887642 222 223445432 2344433333469999999999999999999971
Q ss_pred --CCCCccc---------cccCcc--------ccccccceeEEecCCcceeEEEec
Q psy12877 317 --QKGQLSQ---------FWYDEN--------TTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 --~~gl~~~---------~~~~~~--------~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
..++... .+|.+. ...+++..+.++.||++++++|+.
T Consensus 368 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 368 PPTLHFETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred CCCCCCCCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 1111110 001111 125677777788899999999974
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=186.87 Aligned_cols=241 Identities=19% Similarity=0.153 Sum_probs=169.2
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++...|+ ..|.++++++|+||+.||.+|+++|++|+ |++||||+|.... |.
T Consensus 139 ~~a~~is~~~gl--~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p~-------------------- 194 (399)
T cd00832 139 VNTGQISIRHGM--RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-PW-------------------- 194 (399)
T ss_pred HHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-HH--------------------
Confidence 367789999999 69999999999999999999999999999 9999999998433 10
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
....+. ..+.+. .++.
T Consensus 195 ---------------------------------~~~~~~------~~~~ls-------------------~~~~------ 210 (399)
T cd00832 195 ---------------------------------GWVAQL------SSGRLS-------------------TSDD------ 210 (399)
T ss_pred ---------------------------------HHHHHH------hccccC-------------------CCCC------
Confidence 000000 001110 0000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC--CCCcHHHHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID--FPIAPAFAIPTLLK 249 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~--~~~~~~~a~~~al~ 249 (814)
.-..++|+..+++|.+ ++|||+++||++++.|+++|.+++++|.|++.+.+.... .+.+...+++++|+
T Consensus 211 --p~~~~rPFd~~~~G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~ 281 (399)
T cd00832 211 --PARAYLPFDAAAAGYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALA 281 (399)
T ss_pred --CCCCcCCCcCCCCCEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHH
Confidence 0014555654444554 789999999999999999999999999999997753221 23445689999999
Q ss_pred HcCCCCCCccEEecCCCchH----HHHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCCCC
Q psy12877 250 NGGVAKQDVALWEINEAFSV----VVLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQ 320 (814)
Q Consensus 250 ~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl 320 (814)
++|++++|||+++.|.+-+. .+...+ +.||-...|| +.-+-.+||+.+++|+..++.++.+|++ ....+
T Consensus 282 ~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv--~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~ 359 (399)
T cd00832 282 DAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPV--TAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNV 359 (399)
T ss_pred HcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCce--eCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCC
Confidence 99999999999999987653 333333 3345332244 4444457999999999999999999997 11121
Q ss_pred ccc------ccc---CccccccccceeEEecCCcceeEEE
Q psy12877 321 LSQ------FWY---DENTTQRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 321 ~~~------~~~---~~~~~~~~~~~~~~~ggG~g~a~ll 351 (814)
... .|. ......+++.+..++.||++++++|
T Consensus 360 ~~~~p~~~l~~v~~~~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 360 TDVPPAYGLDLVTGRPRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCCCCCcccCCCcccCCCCCEEEEeccCCCCcceEEEC
Confidence 110 000 0111356778888888999998875
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.2e-17 Score=181.97 Aligned_cols=244 Identities=15% Similarity=0.092 Sum_probs=169.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++..+|+ ..|.++++++|+||+.||..|+++|++|++|++||||+|..+....
T Consensus 139 ~~~a~~is~~~~l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~------------------- 197 (406)
T PRK07967 139 STVSACLATPFKI--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMS------------------- 197 (406)
T ss_pred chHHHHHHHHHCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHH-------------------
Confidence 3588899999999 6999999999999999999999999999999999999997432100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.+ ++.+ .+.. . ..+ ..++
T Consensus 198 ------------~~----------------f~~~------~~ls---~-~~~-----------------~~p~------- 215 (406)
T PRK07967 198 ------------CL----------------FDAM------GALS---T-KYN-----------------DTPE------- 215 (406)
T ss_pred ------------HH----------------HHHh------hhhc---c-CCC-----------------CCCC-------
Confidence 00 0000 0000 0 000 0001
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
..++|+...++|.+ ++|||+++||++.+.|+++|.+++++|.|++.+.+.... .+.+...+++++
T Consensus 216 -----~~~rPFd~~r~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~A 283 (406)
T PRK07967 216 -----KASRAYDANRDGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMA 283 (406)
T ss_pred -----cCCcCCcCCCCcee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
Confidence 13456654444555 779999999999999999999999999999997754322 133446799999
Q ss_pred HHHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSV----VVLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+.++ + |||+++.|..-+. .+...+ +.||- .++.++.-+-.+||..|++|+..++.++.+|+. ...
T Consensus 284 l~~~~--~-~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~--~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~ 358 (406)
T PRK07967 284 LATVD--T-PIDYINTHGTSTPVGDVKELGAIREVFGD--KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSA 358 (406)
T ss_pred HhCCC--C-CccEEEcCCCCCCCCCHHHHHHHHHHhCC--CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCC
Confidence 98655 4 9999999987663 333333 33553 222344444558999999999999999999997 222
Q ss_pred CCc-------cccccCcc---ccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQL-------SQFWYDEN---TTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~-------~~~~~~~~---~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
++. .+.|.... ...+.+..+.++.||.+.+++|+++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 359 NIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred CCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 221 12222211 1245677778888999999999865
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.7e-17 Score=182.60 Aligned_cols=245 Identities=20% Similarity=0.210 Sum_probs=167.8
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+ ..|.+++.++|+|++.||..|+++|++|++|++||+|+|.... |.
T Consensus 140 ~~a~~is~~~gl--~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~-------------------- 196 (406)
T PRK08439 140 MLGGFISIEHGL--KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PV-------------------- 196 (406)
T ss_pred HHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HH--------------------
Confidence 588899999999 5899999999999999999999999999999999999997432 10
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
....+.+ .+.+... ..+++
T Consensus 197 ---------------------------------~~~~f~~------~~~ls~~--------------~~~p~-------- 215 (406)
T PRK08439 197 ---------------------------------GIGGFAA------MKALSTR--------------NDDPK-------- 215 (406)
T ss_pred ---------------------------------HHHHHHH------hCccccC--------------CCCCc--------
Confidence 0000000 0000000 00000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC---CcHHHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP---IAPAFAIPTLL 248 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~---~~~~~a~~~al 248 (814)
..++|+...++|.+ ++|||+++||++.+.|+++|.+++++|.|++...+...... .+...+++++|
T Consensus 216 ----~~~rpfd~~~~G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al 284 (406)
T PRK08439 216 ----KASRPFDKDRDGFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAAL 284 (406)
T ss_pred ----cCcCCccCCCCcEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHH
Confidence 13445543333444 77999999999999999999999999999998765322211 34468999999
Q ss_pred HHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CCC
Q psy12877 249 KNGGVAKQDVALWEINEAFSV----VVLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QKG 319 (814)
Q Consensus 249 ~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~g 319 (814)
+++|+ +|||+++.|...+. .+...+ +.+|-...++.++.-+-.+||..+++|+..++-++.+|+++ ...
T Consensus 285 ~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~ 362 (406)
T PRK08439 285 EMAGN--PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTIN 362 (406)
T ss_pred HHcCC--CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCC
Confidence 99999 89999999988663 333333 34443222222333334489999999999999999999971 111
Q ss_pred Cccc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 320 QLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 320 l~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+... ..+.+ ....+++..+.++.||++.+++|++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 363 QETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 1110 00111 1124567788888999999999975
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-17 Score=185.53 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=165.1
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
...+..++..+|+ ..|.++++.+|+|++.||..|+++|++|.+|++||+|+|.+.....
T Consensus 147 ~~~a~~i~~~~gl--~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~------------------- 205 (421)
T cd00833 147 AFLANRISYFFDL--RGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDM------------------- 205 (421)
T ss_pred HHHHHHHHHHcCC--CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHH-------------------
Confidence 4477789999999 4799999999999999999999999999999999999998543100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ .... ..+.+. ++
T Consensus 206 ---------------------------------~--~~~~------~~~~l~-------------------~~------- 218 (421)
T cd00833 206 ---------------------------------F--VGFS------KAGMLS-------------------PD------- 218 (421)
T ss_pred ---------------------------------H--HHHh------hCCCCC-------------------CC-------
Confidence 0 0000 001110 00
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-----CCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~~~~~a~~ 245 (814)
...+|+.. ..++..++|||+++||++++.|++.+.+++++|.|++...+.... ...+...+++
T Consensus 219 -----~~~~pf~~-------~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~ 286 (421)
T cd00833 219 -----GRCRPFDA-------DADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIR 286 (421)
T ss_pred -----CCCCCCCC-------CCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHH
Confidence 01222321 223445789999999999999999999999999999987653211 1234467999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHHH-HHHhhh----cCCC---CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVVV-LANIKK----LDID---PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~~-l~~~e~----lg~~---~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
++|+++|++++|||+++.|...+... ....++ ++-. ..++.++.-+-.+||+.+++|+..++.++.+|++
T Consensus 287 ~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ 366 (421)
T cd00833 287 RAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGV 366 (421)
T ss_pred HHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999987532 222222 2221 1344444455558999999999999999999997
Q ss_pred --CCCCCccc----cc-----cCccc--------cccccceeEEecCCcceeEEE
Q psy12877 316 --GQKGQLSQ----FW-----YDENT--------TQRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 316 --g~~gl~~~----~~-----~~~~~--------~~~~~~~~~~~ggG~g~a~ll 351 (814)
....+... .| |.+.+ ..+.+..+.++.||.+++++|
T Consensus 367 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 367 IPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred cCCcCCCCCCCCCCCcccCCeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 12222110 00 10111 135666777777888887764
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=179.12 Aligned_cols=232 Identities=15% Similarity=0.209 Sum_probs=159.9
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++..+|+ ..|.++++.+|+|++.||.+|+++|++|++|+|||+|+|..+....
T Consensus 137 ~~~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~------------------- 195 (392)
T PRK09185 137 GSLADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTL------------------- 195 (392)
T ss_pred cHHHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHH-------------------
Confidence 4588899999999 4799999999999999999999999999999999999997432100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
..+. + .+.+. +
T Consensus 196 -------------------------------~~~~-----~------~~~l~--------------------~------- 206 (392)
T PRK09185 196 -------------------------------NGFN-----S------LESLS--------------------P------- 206 (392)
T ss_pred -------------------------------HHHH-----h------ccccC--------------------C-------
Confidence 0000 0 00000 0
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC-----CCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP-----IDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p-----~~~~~~~~~a~~ 245 (814)
...+|+...++| -.++||++++||+++ ...+ ++|.|++...+.. ...+.+...+++
T Consensus 207 -----~~~~Pfd~~~~G-------~~~gEGaa~vVLe~~------~~~~-~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~ 267 (392)
T PRK09185 207 -----QPCRPFSANRDG-------INIGEAAAFFLLERE------DDAA-VALLGVGESSDAHHMSAPHPEGLGAILAMQ 267 (392)
T ss_pred -----CccCCCcCCCCc-------cceeceEEEEEEEEc------CCCc-EEEEEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 012233211112 336799999999987 1233 5899999876532 222334467999
Q ss_pred HHHHHcCCCCCCccEEecCCCchH----HHHHHhh-hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSV----VVLANIK-KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~----~~l~~~e-~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++|++++|||+++.|...+. .+...++ .+|- ..|++...+. +||+.+++|+..++.++++|++ .
T Consensus 268 ~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~-~~pv~s~K~~--~Gh~~~AaG~~~l~~~~~~l~~~~ip~ 344 (392)
T PRK09185 268 QALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD-GVPCSSTKGL--TGHTLGAAGAVEAAICWLALRHGLPPH 344 (392)
T ss_pred HHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC-CCceeCCCcc--cccChhhcchHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999875 3444443 3442 2355554444 6999999999999999999997 2
Q ss_pred CCCCcc-------ccccCccc--cccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLS-------QFWYDENT--TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~-------~~~~~~~~--~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+.. ..|..+.. ..+++..+.++.||+..+++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 345 GWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 222211 12222222 256778888899999999999864
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-16 Score=174.86 Aligned_cols=200 Identities=20% Similarity=0.178 Sum_probs=144.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++...|+ ..|.+++.++|+||+.||.+|+++|++|++|++||||+|.... |...
T Consensus 152 n~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~~~----------------- 211 (398)
T PRK06519 152 NLLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PDML----------------- 211 (398)
T ss_pred hHHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH-----------------
Confidence 3588899999999 6999999999999999999999999999999999999997432 1100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
. .... .+.+..
T Consensus 212 ----------------------------------~--~~~~------~~~ls~--------------------------- 222 (398)
T PRK06519 212 ----------------------------------L--LYEL------GGLLLK--------------------------- 222 (398)
T ss_pred ----------------------------------H--HHHH------cCccCC---------------------------
Confidence 0 0000 000000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHHHHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKN 250 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~ 250 (814)
...+|.|++ .| ...+.-.++|||+++||++++.|+++|.+++++|.|++... ++. ...+...++++||++
T Consensus 223 -----~~~~p~~d~--~~-~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~-~~~-~~~~~~~am~~AL~~ 292 (398)
T PRK06519 223 -----GGWAPVWSR--GG-EDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDR-ARR-APGDLEASLERLLKP 292 (398)
T ss_pred -----CCCCchhcc--Cc-cCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC-CCC-ChHHHHHHHHHHHHH
Confidence 001122211 00 11233337899999999999999999999999999997533 232 223557899999999
Q ss_pred cCCCCCCccEEecCCCchH----HHHHHhhh-cCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 251 GGVAKQDVALWEINEAFSV----VVLANIKK-LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 251 aGl~~~DID~~e~~d~fa~----~~l~~~e~-lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
||+ ++|||+++.|.+-+. .+...++. ++ .||+..- -.+||.++++|+..++-++++|+.
T Consensus 293 Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~---~pvsS~K--s~~GH~l~AAGa~e~i~~~lal~~ 356 (398)
T PRK06519 293 AGG-LAAPTAVISGATGAHPATAEEKAALEAALA---GPVRGIG--TLFGHTMEAQFPLGLALAALSVSK 356 (398)
T ss_pred CCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC---CCccccc--hhhccchHHHHHHHHHHHHHHHhc
Confidence 999 899999999988663 34444443 34 2455444 357999999999999999999995
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.69 E-value=7e-16 Score=202.38 Aligned_cols=244 Identities=16% Similarity=0.203 Sum_probs=177.7
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++..++..+|| .+|+++|+++|+||+.||++|++.|++|+||++||||++.... |..
T Consensus 183 n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~~------------------ 241 (2582)
T TIGR02813 183 NVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PFM------------------ 241 (2582)
T ss_pred cHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HHH------------------
Confidence 4578899999999 6999999999999999999999999999999999999986432 110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.++ +.+ .+. +.+|+
T Consensus 242 -----------~~~------------------------fs~------~~~-------------------lS~~g------ 255 (2582)
T TIGR02813 242 -----------YMS------------------------FSK------TPA-------------------FTTNE------ 255 (2582)
T ss_pred -----------HHH------------------------HHh------ccC-------------------cCCCC------
Confidence 000 000 011 11111
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC-----CcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP-----IAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~-----~~~~~a~~ 245 (814)
.++|+..+.+|++ ++||+++|||.+.+.|++.|.+++++|.|++.+++...... .+-..+++
T Consensus 256 ------~crpFD~~adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~ 322 (2582)
T TIGR02813 256 ------DIQPFDIDSKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALK 322 (2582)
T ss_pred ------CccCCCCCCCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHH
Confidence 2445554445665 67999999999999999999999999999999876542211 23367999
Q ss_pred HHHHHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCCC---CCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSV----VVLANI-KKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
++|+++|++++||||+|.|..-+. .++..+ +.|+-.. .++-+..-+-.+||..+++|+..++.+++.|++
T Consensus 323 ~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~ 402 (2582)
T TIGR02813 323 RAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKV 402 (2582)
T ss_pred HHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987763 333333 3444322 245455555568999999999999999999997
Q ss_pred --CCCCC---------c---------cccccCc-cccccccceeEEecCCcceeEEEecC
Q psy12877 316 --GQKGQ---------L---------SQFWYDE-NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g~~gl---------~---------~~~~~~~-~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+ . ...|... ....|++.++.++.||.+.+++||..
T Consensus 403 iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 403 LPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred cCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 11111 1 1123321 22357888888899999999999964
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.6e-16 Score=170.10 Aligned_cols=240 Identities=18% Similarity=0.078 Sum_probs=165.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
+..+.+++..+|+ ..|+++++.+|+|++.+|.+|.++|++|++|.+||+|+|.++.....
T Consensus 73 ~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~------------------ 132 (332)
T cd00825 73 PGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDC------------------ 132 (332)
T ss_pred hHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHH------------------
Confidence 4467899999999 68999999999999999999999999999999999999986541100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
. +... .+. ..+++.
T Consensus 133 ------~------------~~~~------------------------~~~-------------------~~~~~~----- 146 (332)
T cd00825 133 ------E------------FDAM------------------------GAL-------------------STPEKA----- 146 (332)
T ss_pred ------H------------HHhh------------------------ccc-------------------cCCCCC-----
Confidence 0 0000 000 000000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-----CCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~~~~~a~~ 245 (814)
.+|+. ...+++.++|||+|+||++++.|++++.+++++|.+++...+.... .......+++
T Consensus 147 -------~~~~~-------~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~ 212 (332)
T cd00825 147 -------SRTFD-------AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAK 212 (332)
T ss_pred -------CCCCC-------CCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHH
Confidence 11221 1246777899999999999999999999999999999876542211 1234567999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC---CCcccCCCCccccCCCCChHHHHHHHHHHHHHcCCCCCcc
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQLS 322 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g~~gl~~ 322 (814)
++|+++|++++|||+++.|..+....-...+.+++.. ++++.....-.+||..++++...+.+++.+++.+ .-..+
T Consensus 213 ~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~-~~p~~ 291 (332)
T cd00825 213 EALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHG-FIPPS 291 (332)
T ss_pred HHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcC-ccCCC
Confidence 9999999999999999999988754333323332221 2355666667799999999999999999999952 00011
Q ss_pred cccc------------CccccccccceeEEecCCcceeEEE
Q psy12877 323 QFWY------------DENTTQRLSEEVVCRAGKEGSIALI 351 (814)
Q Consensus 323 ~~~~------------~~~~~~~~~~~~~~~ggG~g~a~ll 351 (814)
.++. ...+..+++..+.++.||...+++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 292 IHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 1000 0111234566666666777777764
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-15 Score=171.10 Aligned_cols=193 Identities=23% Similarity=0.268 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccC--------------------------CCCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQA--------------------------GLGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~--------------------------~~~~~~a~~~a~~~Gl 451 (814)
..+|+.+++.+||+|||++++++|. +++|+..+. ......+..++..+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 4678899999999999999999884 666653211 0011245567888898
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
..|.++++.+|+||+.||..|+++|++|++|++||+|+|.+..... ..
T Consensus 152 --~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~------------------------------~~ 199 (411)
T PRK07314 152 --KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLG------------------------------IA 199 (411)
T ss_pred --CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHH------------------------------HH
Confidence 4689999999999999999999999999999999999987642100 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
+..+.+. + +.+ ..+|.... +| |+
T Consensus 200 ~~~~~~~---------------l-s~~---~~~p~~~~-------------------------------------~p-fd 222 (411)
T PRK07314 200 GFAAARA---------------L-STR---NDDPERAS-------------------------------------RP-FD 222 (411)
T ss_pred HHHHhcc---------------c-cCC---CCCCCcCc-------------------------------------CC-Cc
Confidence 0000000 0 000 00221111 11 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
+ ..|++.++|||+++||+++|.|+++|.+|+++|+|++...+ .|...+.++..+++++|+++++ ..|+
T Consensus 223 ~------~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dI 296 (411)
T PRK07314 223 K------DRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDI 296 (411)
T ss_pred C------CCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHC
Confidence 1 13667799999999999999999999999999999998764 4555566788899999999999 5799
Q ss_pred eEeh
Q psy12877 686 WYDE 689 (814)
Q Consensus 686 ~y~e 689 (814)
+|.+
T Consensus 297 d~v~ 300 (411)
T PRK07314 297 DYIN 300 (411)
T ss_pred CEEE
Confidence 9987
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.7e-15 Score=163.91 Aligned_cols=219 Identities=14% Similarity=0.093 Sum_probs=151.8
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+..++..+|+....|.++++.+|+|++.||..|+++|++|++|.+||+|+|.++....
T Consensus 110 ~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~--------------------- 168 (348)
T PRK06147 110 LLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPT--------------------- 168 (348)
T ss_pred HHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHH---------------------
Confidence 45678888999656789999999999999999999999999999999999999765211
Q ss_pred CcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCH
Q psy12877 93 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF 172 (814)
Q Consensus 93 ~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~ 172 (814)
++.+. . ...++. +
T Consensus 169 ----------------------------~~~~~-----~-----~~~l~~-------------------~---------- 181 (348)
T PRK06147 169 ----------------------------LAHYE-----A-----RDRLLT-------------------S---------- 181 (348)
T ss_pred ----------------------------HHHHH-----H-----hhccCC-------------------C----------
Confidence 00000 0 000000 0
Q ss_pred HhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC------CCCCCcHHHHHHH
Q psy12877 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP------IDFPIAPAFAIPT 246 (814)
Q Consensus 173 e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p------~~~~~~~~~a~~~ 246 (814)
...+...++|||+++||++.+.|++.+.++++ .|++...+.. ...+.+...++++
T Consensus 182 -----------------~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~ 242 (348)
T PRK06147 182 -----------------QNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRA 242 (348)
T ss_pred -----------------CCCCceeeeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHH
Confidence 01223337899999999999999999988886 5666543321 1124456789999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||+++.|-..+.. .....+.++-..+++.++--+-.+||..+++|+..++.++.+|++ +.
T Consensus 243 AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~ 322 (348)
T PRK06147 243 ALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP 322 (348)
T ss_pred HHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 999999999999999999774432 122333455332222233344557999999999999999999996 23
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+.|+.. ..-.|.=.+++|+..
T Consensus 323 ~~L~~s----------------~~d~g~r~a~~l~~~ 343 (348)
T PRK06147 323 NVLCHL----------------SDDDGARAALVLEYR 343 (348)
T ss_pred cEEEEe----------------cCCCCceEEEEEecc
Confidence 333332 444566678888753
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-15 Score=172.76 Aligned_cols=193 Identities=23% Similarity=0.240 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC--------------------------CCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG--------------------------LGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl 451 (814)
..+|+.+++++||+|+|++++++|. +++|+..+.. .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4679999999999999999999987 5555432110 011244567788898
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
..|.++++++|+||+.||..|+++|++|++|++||+|+|++.. |. . ..
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~------------------~-----------~~ 198 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PL------------------G-----------IA 198 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HH------------------H-----------HH
Confidence 4689999999999999999999999999999999999997642 10 0 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
+..+.+++.++ ++.... ..+| |.
T Consensus 199 ~~~~~~~ls~~---------------------~~~~~~-----------------------------------~~~p-fd 221 (407)
T TIGR03150 199 GFAAMKALSTR---------------------NDDPEK-----------------------------------ASRP-FD 221 (407)
T ss_pred HHHHhCcccCC---------------------CCCCCc-----------------------------------CCCC-Cc
Confidence 00000000000 000000 0011 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCCC-cce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQL-SQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~~-sq~ 685 (814)
. ..|+..++|||+++||++++.|+++|.+++++|+|++...+ .|...+.+...+++++|+++++. .|+
T Consensus 222 ~------~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dI 295 (407)
T TIGR03150 222 K------DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDV 295 (407)
T ss_pred C------CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHC
Confidence 0 12445589999999999999999999999999999998654 23334556788999999999994 799
Q ss_pred eEeh
Q psy12877 686 WYDE 689 (814)
Q Consensus 686 ~y~e 689 (814)
+|.|
T Consensus 296 d~ve 299 (407)
T TIGR03150 296 DYIN 299 (407)
T ss_pred CEEe
Confidence 9987
|
FabB sequences should fall well below the noise cutoff of this model. |
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-16 Score=162.84 Aligned_cols=193 Identities=25% Similarity=0.292 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCc---Ccc----eEEEEecccCCCC--------------------------ChHHHHHHHH
Q psy12877 402 ATKLGAVAIESAIQKANMDKS---DVQ----EVYMGNVCQAGLG--------------------------QAPCRQAVIF 448 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~---dID----~vivG~~~~~~~~--------------------------~~~a~~~a~~ 448 (814)
+..|+..|+++||+|+++.+. +.| +|.+|..+..... ...+.+++..
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 455889999999999997654 233 4677765533110 1234467777
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK 528 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (814)
.|+ ..|...++++|++|..+|..|.+.|+.|++|+.|+||.|+.-. |..
T Consensus 174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-Pls---------------------------- 222 (440)
T KOG1394|consen 174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PLS---------------------------- 222 (440)
T ss_pred hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-chh----------------------------
Confidence 788 4689999999999999999999999999999999999998532 110
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH---hhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhc
Q psy12877 529 IHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD---AYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKS 605 (814)
Q Consensus 529 ~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~---a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~ 605 (814)
++--++.+|.. .||..--| |.. ++++|
T Consensus 223 -----------------------laGF~r~RALSt~nd~P~~aSR----PfD-~~RdG---------------------- 252 (440)
T KOG1394|consen 223 -----------------------LAGFSRARALSTRNDNPQKASR----PFD-KKRDG---------------------- 252 (440)
T ss_pred -----------------------hhhHHHHHHhhhcCCCccccCC----CCc-cCCCc----------------------
Confidence 00001112221 13321101 110 01111
Q ss_pred cccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcC
Q psy12877 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGG 680 (814)
Q Consensus 606 ~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~ 680 (814)
|+ +++|++.+||++.|+|+++|.+++++++|||.++| .|+..+.|...+++++|+++|
T Consensus 253 ----FV-------------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Ag 315 (440)
T KOG1394|consen 253 ----FV-------------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAG 315 (440)
T ss_pred ----ee-------------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcC
Confidence 22 89999999999999999999999999999999877 678888999999999999999
Q ss_pred C-CcceeEehhhh
Q psy12877 681 Q-LSQFWYDENTT 692 (814)
Q Consensus 681 ~-~sq~~y~e~t~ 692 (814)
+ ..|++|....+
T Consensus 316 l~pe~i~YvNAHA 328 (440)
T KOG1394|consen 316 LSPEDIDYVNAHA 328 (440)
T ss_pred CChhhcCeeeccc
Confidence 9 68999986544
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-15 Score=170.96 Aligned_cols=196 Identities=21% Similarity=0.267 Sum_probs=136.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-CcCcceEEEEecccCCCCC------------------------------hHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMD-KSDVQEVYMGNVCQAGLGQ------------------------------APCRQAVIF 448 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~-~~dID~vivG~~~~~~~~~------------------------------~~a~~~a~~ 448 (814)
-+..+|+..++++||+|+|++ +.+++...+|.+.+.+.+. .++..++..
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 456789999999999999998 7777765555443322211 234456677
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK 528 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (814)
+|+ +.|.++++++|+||+.||..|+++|++|++|++||+|+|.+. .|.. ..
T Consensus 155 ~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~-~p~~------------------~~-------- 205 (421)
T PTZ00050 155 HKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASI-TPVS------------------FA-------- 205 (421)
T ss_pred hCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccC-CHHH------------------HH--------
Confidence 787 468999999999999999999999999999999999999854 2210 00
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 529 IHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 529 ~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
.| .+.+. + +... ...|... .+|
T Consensus 206 -~f--------~~~~~-------l---~~~~--~~~p~~~-------------------------------------~~p 227 (421)
T PTZ00050 206 -GF--------SRMRA-------L---CTKY--NDDPQRA-------------------------------------SRP 227 (421)
T ss_pred -HH--------Hhhhc-------c---ccCc--CCCCCcc-------------------------------------CCC
Confidence 00 00000 0 0000 0000000 001
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHh-cCC-
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKN-GGQ- 681 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~-~~~- 681 (814)
|++. -+--.++|||+++||++++.|+++|.+++++|+|++...+ .|...+.++..+++++|++ +++
T Consensus 228 -fd~~------~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~ 300 (421)
T PTZ00050 228 -FDKD------RAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANIN 300 (421)
T ss_pred -CcCC------CCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCC
Confidence 1110 0112379999999999999999999999999999998766 3555667888999999999 999
Q ss_pred CcceeEeh
Q psy12877 682 LSQFWYDE 689 (814)
Q Consensus 682 ~sq~~y~e 689 (814)
.+|++|.|
T Consensus 301 ~~dId~ie 308 (421)
T PTZ00050 301 INDVDYVN 308 (421)
T ss_pred hhhCCEEE
Confidence 57999987
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.3e-15 Score=161.84 Aligned_cols=198 Identities=22% Similarity=0.173 Sum_probs=147.1
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC----CcCcceEEEEecccCCC-----------------
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMD----KSDVQEVYMGNVCQAGL----------------- 437 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~----~~dID~vivG~~~~~~~----------------- 437 (814)
+++|+|++.+ ..+|+.+|+++||+++|++ +.+||++++|+..+...
T Consensus 1 ~~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (332)
T cd00825 1 RAVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVV 67 (332)
T ss_pred CceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchh
Confidence 4789999987 5799999999999999999 89999999988754332
Q ss_pred ----CChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccc
Q psy12877 438 ----GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNL 513 (814)
Q Consensus 438 ----~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~ 513 (814)
.+..+..++..+|+ ..|.++++.+|+|+..+|..|.++|++|.+|.+|++|+|.++....
T Consensus 68 ~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~-------------- 131 (332)
T cd00825 68 TKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD-------------- 131 (332)
T ss_pred hcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHH--------------
Confidence 23457788999999 4688999999999999999999999999999999999997652100
Q ss_pred cccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCC
Q psy12877 514 IDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDE 593 (814)
Q Consensus 514 ~~~~~~~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~ 593 (814)
.. ++ ...+.. +|....+
T Consensus 132 ------~~--------~~--------~~~~~~------------------~~~~~~~----------------------- 148 (332)
T cd00825 132 ------CE--------FD--------AMGALS------------------TPEKASR----------------------- 148 (332)
T ss_pred ------HH--------HH--------hhcccc------------------CCCCCCC-----------------------
Confidence 00 00 000000 1111000
Q ss_pred ccccCCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-----CCchH
Q psy12877 594 EYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAP 668 (814)
Q Consensus 594 ~~~~~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~g~ 668 (814)
| |. ...+++.++|||+|+||++++.|++++.+++++|.|++...+.... ...+.
T Consensus 149 --------------~-~~------~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 207 (332)
T cd00825 149 --------------T-FD------AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGL 207 (332)
T ss_pred --------------C-CC------CCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHH
Confidence 1 10 1246777999999999999999999999999999999865442211 12345
Q ss_pred HhHHHHHHHhcCC-CcceeEeh
Q psy12877 669 AFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 669 ~~A~~~~~~~~~~-~sq~~y~e 689 (814)
..+++++|+++++ .+|++|..
T Consensus 208 ~~~i~~al~~agl~~~did~~~ 229 (332)
T cd00825 208 ARAAKEALAVAGLTVWDIDYLV 229 (332)
T ss_pred HHHHHHHHHHcCCCHhHCCEEE
Confidence 6789999999998 47887775
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-15 Score=171.36 Aligned_cols=195 Identities=21% Similarity=0.232 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCc-c----eEEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDV-Q----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dI-D----~vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
...|+..++++||+|+|+++.++ + ++++|+..+.. .....+..++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 45688899999999999988776 4 46666543211 00123556778888
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+ ..|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. +. ....
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~------------------~~~~--------- 211 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RV------------------SLAG--------- 211 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HH------------------HHHH---------
Confidence 8 4799999999999999999999999999999999999998632 10 0000
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
+ .....+++.|+.++++ .++|....+
T Consensus 212 f-~~~~~l~~~~~~~p~~-------------~~~Pfd~~~---------------------------------------- 237 (424)
T PRK06333 212 F-AAARALSTRFNDAPEQ-------------ASRPFDRDR---------------------------------------- 237 (424)
T ss_pred H-HHcccccccCCCCCCc-------------CCCCCCCCC----------------------------------------
Confidence 0 0001111222222111 112221111
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCCC-cc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQL-SQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~~-sq 684 (814)
+| -.++|||+++||++++.|+++|.+++++|+|++...+. |...+.+...+++++|+++++. .|
T Consensus 238 ---~G-------~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~d 307 (424)
T PRK06333 238 ---DG-------FVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEE 307 (424)
T ss_pred ---CC-------eEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 11 12799999999999999999999999999999987552 3333456678999999999994 79
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
++|.+-
T Consensus 308 Id~i~~ 313 (424)
T PRK06333 308 VQHLNA 313 (424)
T ss_pred CCEEec
Confidence 999873
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-14 Score=160.76 Aligned_cols=195 Identities=26% Similarity=0.305 Sum_probs=136.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-CcCcc---eEEEEecccCCCC---------------------------ChHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMD-KSDVQ---EVYMGNVCQAGLG---------------------------QAPCRQAVIF 448 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~-~~dID---~vivG~~~~~~~~---------------------------~~~a~~~a~~ 448 (814)
-+...|+..|+.+||+|+|+. ..+++ ++++|+....... ...+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 356789999999999999997 33453 3556654432210 0245567777
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeec-cccCccccCCCccCCCCccccccccccccccccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES-MSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYN 527 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es-~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (814)
.|+ ..+.+++.++|+||.+||..|++.|+.|++|++|+||+|+ .+.... .+
T Consensus 149 ~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i--------------------~g------ 200 (412)
T COG0304 149 FGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGI--------------------AG------ 200 (412)
T ss_pred hCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHH--------------------HH------
Confidence 787 4689999999999999999999999999999999999987 321100 00
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccc
Q psy12877 528 KIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLA 607 (814)
Q Consensus 528 ~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~ 607 (814)
++.....+.+| . .|...-| |.+ ++++|
T Consensus 201 ---------------------F~am~Alst~n--d-~p~~asr----Pfd-~~RdG------------------------ 227 (412)
T COG0304 201 ---------------------FEAMRALSTRN--D-DPEKASR----PFD-KNRDG------------------------ 227 (412)
T ss_pred ---------------------HHHHHHhccCC--C-CccccCC----CCC-CCCCC------------------------
Confidence 00000001110 0 1110000 110 11111
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ- 681 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~- 681 (814)
|. +++||+++||++.|.|+++|.+++++|+||+..+| .|...+.|...|++.+|+++++
T Consensus 228 --fv-------------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~ 292 (412)
T COG0304 228 --FV-------------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292 (412)
T ss_pred --EE-------------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCC
Confidence 22 89999999999999999999999999999998766 5777788999999999999999
Q ss_pred CcceeEehh
Q psy12877 682 LSQFWYDEN 690 (814)
Q Consensus 682 ~sq~~y~e~ 690 (814)
.+|++|.-.
T Consensus 293 ~~~idYina 301 (412)
T COG0304 293 PEDIDYINA 301 (412)
T ss_pred HhHCCEEeC
Confidence 569999853
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=165.94 Aligned_cols=195 Identities=21% Similarity=0.216 Sum_probs=134.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCC-----cCcceEEEEecccCCC--------------------------CChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDK-----SDVQEVYMGNVCQAGL--------------------------GQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~-----~dID~vivG~~~~~~~--------------------------~~~~a~~~a~~~ 449 (814)
+...|+..|+.+||+|||+++ .+..++++|+..+... ...++..++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 355789999999999999854 2456788886532210 112455678888
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+ +.|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. +. .
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~------------------~----------- 219 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-AL------------------S----------- 219 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HH------------------H-----------
Confidence 88 4799999999999999999999999999999999999997421 10 0
Q ss_pred cHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 530 HMGNCA-ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~A-e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
..+... ..++++++. +|... .+|
T Consensus 220 ~~~~~~~~~l~~~~~~-------------------~p~~~-------------------------------------~~p 243 (437)
T PLN02836 220 IAGFSRSRALSTKFNS-------------------CPTEA-------------------------------------SRP 243 (437)
T ss_pred HHHHHHhhhhhcccCC-------------------Ccccc-------------------------------------cCC
Confidence 000000 000011111 11100 001
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-C
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~ 682 (814)
+ .+ .-|...++|||+++||+++|.|+++|.+++++|+|++..++. |...+.+...|++++|+++++ .
T Consensus 244 f-d~------~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~ 316 (437)
T PLN02836 244 F-DC------DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHP 316 (437)
T ss_pred c-cc------CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCH
Confidence 1 00 113455899999999999999999999999999999987652 322334556799999999999 4
Q ss_pred cceeEehh
Q psy12877 683 SQFWYDEN 690 (814)
Q Consensus 683 sq~~y~e~ 690 (814)
.||+|.+-
T Consensus 317 ~dId~ve~ 324 (437)
T PLN02836 317 NQVDYVNA 324 (437)
T ss_pred hHcCEEEc
Confidence 79999873
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=151.30 Aligned_cols=159 Identities=30% Similarity=0.373 Sum_probs=137.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
+..+|+.+|++++|+++|+++++||.+++++..+....+..+..++..+|++ ..+.++++.+|+|+..||..|.+.|++
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHHC
Confidence 4679999999999999999999999999998876554567788899999997 689999999999999999999999999
Q ss_pred CCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy12877 481 GHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKS 560 (814)
Q Consensus 481 G~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A 560 (814)
|++|.+|++|+|.
T Consensus 85 g~~~~~lv~~~e~------------------------------------------------------------------- 97 (254)
T cd00327 85 GKADIVLAGGSEE------------------------------------------------------------------- 97 (254)
T ss_pred CCCCEEEEEecce-------------------------------------------------------------------
Confidence 9999999999875
Q ss_pred HHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHH
Q psy12877 561 ADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAV 640 (814)
Q Consensus 561 ~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A 640 (814)
. + ++|||+|+||++++.+
T Consensus 98 -----------~--------------~-------------------------------------~gdGAaa~vL~~~~~a 115 (254)
T cd00327 98 -----------F--------------V-------------------------------------FGDGAAAAVVESEEHA 115 (254)
T ss_pred -----------e--------------e-------------------------------------ecceEEEEEECcHHHH
Confidence 0 1 7899999999999999
Q ss_pred HHcCCCceEEEEEeeeccCCCC----CCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 641 RKFNAKPLARIIAYFDAATEPI----DFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 641 ~~~g~~p~a~I~g~~~~~~~p~----~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
++++.+|+++|.+++...+.+. ........+++++|+++++ ..+++|.+
T Consensus 116 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~ 169 (254)
T cd00327 116 LRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVE 169 (254)
T ss_pred HHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 9999999999999987655433 2334667799999999998 46777764
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.1e-14 Score=158.75 Aligned_cols=185 Identities=19% Similarity=0.233 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHcCCCCcC-cceEEEEecccCC-----------------------------CCChHHHHHHHHcCCCC
Q psy12877 404 KLGAVAIESAIQKANMDKSD-VQEVYMGNVCQAG-----------------------------LGQAPCRQAVIFAGLPK 453 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~d-ID~vivG~~~~~~-----------------------------~~~~~a~~~a~~~Gl~~ 453 (814)
.++..++++||+|+|+++.. -=++++|+..+.. ....++..++...|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~-- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT-- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--
Confidence 46678999999999996522 1257777743210 001245667778888
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
+.|.+++.++|+||+.||..|+++|++|++|++||+|+|.... |. .... +
T Consensus 136 ~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~------------------~~~~---------~-- 185 (381)
T PRK05952 136 QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PL------------------TLAG---------F-- 185 (381)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HH------------------HHHH---------H--
Confidence 4699999999999999999999999999999999999986321 10 0000 0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccC
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE 613 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~ 613 (814)
+..+.- +. ... || |++.
T Consensus 186 ------~~~~~l----------s~------~~~----------------------------------------rP-fd~~ 202 (381)
T PRK05952 186 ------QQMGAL----------AK------TGA----------------------------------------YP-FDRQ 202 (381)
T ss_pred ------HhcCCc----------CC------CCC----------------------------------------CC-CCCC
Confidence 000000 00 000 11 1110
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCCC-cceeE
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQL-SQFWY 687 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~~-sq~~y 687 (814)
-|--.++|||+++||++++.|+++|.+|+++|+|++...+ .|...+.+...|++++|+++++. .|++|
T Consensus 203 ------r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~ 276 (381)
T PRK05952 203 ------REGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDY 276 (381)
T ss_pred ------CCCccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeE
Confidence 0112389999999999999999999999999999998654 23334456778999999999994 79999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.+
T Consensus 277 i~ 278 (381)
T PRK05952 277 IH 278 (381)
T ss_pred EE
Confidence 87
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.9e-14 Score=155.47 Aligned_cols=193 Identities=18% Similarity=0.164 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHcCCC--CcCcceEEEEecccCC------------C--------------CChHHHHHHHHcCCCC
Q psy12877 402 ATKLGAVAIESAIQKANMD--KSDVQEVYMGNVCQAG------------L--------------GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~--~~dID~vivG~~~~~~------------~--------------~~~~a~~~a~~~Gl~~ 453 (814)
..+++..|+++|++|+|+. ++++ ++++|+..+.. . ...++..++...|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4578889999999999974 3333 57777653321 0 01245677888888
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
+.|.+++.++|+||+.||..|+++|+.|++|++||||+|..... . . ..+
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~-~------------------~-----------~~~- 129 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDT-V------------------S-----------LAG- 129 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-H------------------H-----------HHH-
Confidence 47999999999999999999999999999999999999874311 0 0 000
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccC
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE 613 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~ 613 (814)
++..-..+... ...|... ..|.+ +++
T Consensus 130 ---------------f~~~~~ls~~~--~~~p~~~----~rPFd-~~r-------------------------------- 155 (342)
T PRK14691 130 ---------------FAAARALSTHF--NSTPEKA----SRPFD-TAR-------------------------------- 155 (342)
T ss_pred ---------------HHHhhhhhcCC--CCCCCcC----CCCCC-CCC--------------------------------
Confidence 00000000000 0001100 00110 000
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCCC-cceeE
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQL-SQFWY 687 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~~-sq~~y 687 (814)
+|. .++|||+++||++++.|+++|.+|+++|+|++..++. |...+.++..+++++|+++++. +|++|
T Consensus 156 ~G~-------v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdy 228 (342)
T PRK14691 156 DGF-------VMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQH 228 (342)
T ss_pred CCc-------cccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 122 2899999999999999999999999999999988775 4556678889999999999994 79999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.+
T Consensus 229 Ie 230 (342)
T PRK14691 229 LN 230 (342)
T ss_pred EE
Confidence 86
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-14 Score=162.70 Aligned_cols=194 Identities=21% Similarity=0.279 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl 451 (814)
...++..++.+||+|+|+++.+.+ ++++|+..+.. ....++..++..+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 346788899999999999765444 47777653211 011356778888898
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
+.|.++++++|+||+.||..|+++|++|++|++||+|+|..... . ...+ +
T Consensus 154 --~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~-~------------------~~~~---------f 203 (414)
T PRK08722 154 --RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTP-L------------------GMAG---------F 203 (414)
T ss_pred --CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-H------------------HHHH---------H
Confidence 46999999999999999999999999999999999999875321 0 0000 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
...+. + +.. ...|... .|| |+
T Consensus 204 --------~~~~~-------l---s~~---~~~p~~~-------------------------------------~rp-fd 224 (414)
T PRK08722 204 --------GAAKA-------L---STR---NDEPQKA-------------------------------------SRP-WD 224 (414)
T ss_pred --------HHcCC-------c---ccC---CCCCccc-------------------------------------cCc-Cc
Confidence 00000 0 000 0001000 011 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
+. -|--.++|||+++||++++.|+++|.+++++|+|++..++ .|...+.+...+++++|+++++ ..|+
T Consensus 225 ~~------~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~di 298 (414)
T PRK08722 225 KD------RDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQI 298 (414)
T ss_pred CC------CCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHc
Confidence 00 1122389999999999999999999999999999998765 3444444567899999999999 4799
Q ss_pred eEehh
Q psy12877 686 WYDEN 690 (814)
Q Consensus 686 ~y~e~ 690 (814)
+|.+-
T Consensus 299 d~ie~ 303 (414)
T PRK08722 299 GYVNA 303 (414)
T ss_pred CEEEc
Confidence 99863
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.4e-14 Score=158.38 Aligned_cols=195 Identities=21% Similarity=0.169 Sum_probs=137.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcC-cce----EEEEecccCC----------------------CC--ChHHHHHHHHcCC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSD-VQE----VYMGNVCQAG----------------------LG--QAPCRQAVIFAGL 451 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~d-ID~----vivG~~~~~~----------------------~~--~~~a~~~a~~~Gl 451 (814)
+...|+..++++||+|||+++++ ++. +++|+..+.. .. ...+..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998877 553 5555532210 01 3466778888899
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
. ..|.++++++|+||+.||..|+++|++|++|++||+|+|.++ |.... . |
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~~------------------~---------f 200 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGLS------------------G---------F 200 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHHH------------------H---------H
Confidence 3 468999999999999999999999999999999999999875 21000 0 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
... +.+.. +..... ...+|+.
T Consensus 201 --------~~~------------------------~~ls~-------~~~~~~-------------------~~~~pfd- 221 (407)
T cd00828 201 --------ANM------------------------GALST-------AEEEPE-------------------EMSRPFD- 221 (407)
T ss_pred --------HHc------------------------CCCCC-------CCCCCC-------------------cccCCCc-
Confidence 000 00000 000000 0011111
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC----CCchHHhHHHHHHHhcCC-Cccee
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID----FPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~----~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
...+...++|||+++||++++.|+++|.+++++|.|++...+.... .+.+...+++++|+++++ ..+++
T Consensus 222 ------~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId 295 (407)
T cd00828 222 ------ETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLD 295 (407)
T ss_pred ------CCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcC
Confidence 1234556899999999999999999999999999999977664322 235667899999999999 47999
Q ss_pred Eehh
Q psy12877 687 YDEN 690 (814)
Q Consensus 687 y~e~ 690 (814)
|.+-
T Consensus 296 ~i~~ 299 (407)
T cd00828 296 VISA 299 (407)
T ss_pred EEec
Confidence 9864
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=157.71 Aligned_cols=192 Identities=18% Similarity=0.186 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHcCCCCc---Ccc----eEEEEecccCCC-------------------------CChHHHHHHHHcC
Q psy12877 403 TKLGAVAIESAIQKANMDKS---DVQ----EVYMGNVCQAGL-------------------------GQAPCRQAVIFAG 450 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~---dID----~vivG~~~~~~~-------------------------~~~~a~~~a~~~G 450 (814)
..++..++++||+|+|++++ +++ +|++|+..+... ....+..++..+|
T Consensus 200 ~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~g 279 (540)
T PLN02787 200 MLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLG 279 (540)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhC
Confidence 46788899999999999764 222 578887543210 0123456777788
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+|++.||..|+++|++|++|++|+||+|.... |. ..
T Consensus 280 l~--Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~------------------~~----------- 327 (540)
T PLN02787 280 WM--GPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PI------------------GL----------- 327 (540)
T ss_pred CC--CCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HH------------------HH-----------
Confidence 84 789999999999999999999999999999999999986421 10 00
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
.+ ++..-..+.++ . .|....+ |.+ ++.
T Consensus 328 ~~----------------f~~~~aLS~~~--~-~p~~~~r----PFD-~~r----------------------------- 354 (540)
T PLN02787 328 GG----------------FVACRALSQRN--D-DPTKASR----PWD-MNR----------------------------- 354 (540)
T ss_pred HH----------------HHHHHHhhccC--C-CcccccC----Ccc-cCC-----------------------------
Confidence 00 00000001000 0 0110000 110 001
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
+| -.++|||+++||+++|.|+++|.+++++|+|++...+ .|...+.+...+++++|+++++ ..|
T Consensus 355 ---dG-------fv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~d 424 (540)
T PLN02787 355 ---DG-------FVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKED 424 (540)
T ss_pred ---CC-------cccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHH
Confidence 11 1289999999999999999999999999999998765 2334455677899999999999 579
Q ss_pred eeEeh
Q psy12877 685 FWYDE 689 (814)
Q Consensus 685 ~~y~e 689 (814)
|+|.+
T Consensus 425 IdyIn 429 (540)
T PLN02787 425 VNYIN 429 (540)
T ss_pred CcEEE
Confidence 99975
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-13 Score=157.84 Aligned_cols=189 Identities=20% Similarity=0.213 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC-------------------CChHHHHHHHHcCCCCCccEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL-------------------GQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~-------------------~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
...|+.+|+++||+|||+++.+|| ++++|+...... ....+..++..+|+. .|.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 346899999999999999999999 788886532110 123456688888984 5899
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+++.+|+||..||..|+++|++|.+|+|||+|+|.+..... ... +
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~-------------------~~~---------~------- 209 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDT-------------------FVG---------F------- 209 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHH-------------------HHH---------H-------
Confidence 99999999999999999999999999999999987642100 000 0
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt 618 (814)
...+. . .+++.. +| |. .
T Consensus 210 -~~~~~-----------------l-~~~~~~-------------------------------------~p-f~------~ 226 (424)
T smart00825 210 -SRAGM-----------------L-SPDGRC-------------------------------------KT-FD------A 226 (424)
T ss_pred -hhcCC-----------------C-CCCCCC-------------------------------------CC-CC------C
Confidence 00000 0 010000 00 11 0
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-----CCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
..+...++|||+++||++++.|++++.+++++|.|++...+.... .+.+...+++++|+++++ ..||+|.+-
T Consensus 227 ~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~ 304 (424)
T smart00825 227 DADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEA 304 (424)
T ss_pred CCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEe
Confidence 123445899999999999999999999999999999977553221 123445799999999998 478988763
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-13 Score=155.84 Aligned_cols=193 Identities=24% Similarity=0.249 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC--------------------------CCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG--------------------------LGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl 451 (814)
..+|+..|+.+||+|+|+++.++|. +++|...... .....+..++...|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4678999999999999999887775 4444322110 011356677888898
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
. .|.+++..+|+||+.||..|+++|++|++|++|++|+|.... |. .... +
T Consensus 152 ~--Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~------------------~~~~---------f 201 (406)
T PRK08439 152 K--GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PV------------------GIGG---------F 201 (406)
T ss_pred C--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HH------------------HHHH---------H
Confidence 5 688999999999999999999999999999999999997421 10 0000 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
...+ ..+..+ .+|... .+| |+
T Consensus 202 --------~~~~----------~ls~~~---~~p~~~-------------------------------------~rp-fd 222 (406)
T PRK08439 202 --------AAMK----------ALSTRN---DDPKKA-------------------------------------SRP-FD 222 (406)
T ss_pred --------HHhC----------ccccCC---CCCccC-------------------------------------cCC-cc
Confidence 0000 000000 001100 011 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC---CchHHhHHHHHHHhcCCCcceeEe
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF---PIAPAFAIPTLLKNGGQLSQFWYD 688 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~---~~g~~~A~~~~~~~~~~~sq~~y~ 688 (814)
+ .-|--.++|||+++||++++.|+++|.+++++|.|++..++..... ..+...+++++|+++++ .+++|.
T Consensus 223 ~------~~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~-~~i~~v 295 (406)
T PRK08439 223 K------DRDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN-PKIDYI 295 (406)
T ss_pred C------CCCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC-CccCEE
Confidence 0 0011238999999999999999999999999999999766532211 13567899999999998 899998
Q ss_pred hh
Q psy12877 689 EN 690 (814)
Q Consensus 689 e~ 690 (814)
+-
T Consensus 296 ~~ 297 (406)
T PRK08439 296 NA 297 (406)
T ss_pred Ec
Confidence 63
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-13 Score=154.90 Aligned_cols=195 Identities=26% Similarity=0.298 Sum_probs=135.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
+..+|+.+++++||+|+|++++++|. +++|+..+.. .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 45679999999999999999888775 5555432210 01235677888899
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .+.++++.+|+|++.||..|+++|++|++|++||+|+|.++.. . . .
T Consensus 150 l~--g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p-~------------------~-----------~ 197 (406)
T cd00834 150 LR--GPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITP-L------------------T-----------L 197 (406)
T ss_pred CC--CcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCH-H------------------H-----------H
Confidence 94 5899999999999999999999999999999999999976421 0 0 0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
++. ...+. .++.++ .|.+.. +| |
T Consensus 198 ~~~------~~~~~----------l~~~~~---~p~~~~-------------------------------------~p-f 220 (406)
T cd00834 198 AGF------AALRA----------LSTRND---DPEKAS-------------------------------------RP-F 220 (406)
T ss_pred HHH------HhcCC----------cCCCCC---CCccCC-------------------------------------CC-C
Confidence 000 00000 000000 010000 01 1
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
.. ..+...++|||+++||++++.|++++.+++++|.|++...+ .|...+.+...+++++|+++++ .+|
T Consensus 221 ~~------~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~d 294 (406)
T cd00834 221 DK------DRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPED 294 (406)
T ss_pred CC------CCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 10 02334589999999999999999999999999999997654 2333355677899999999998 579
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
++|.+-
T Consensus 295 Id~v~~ 300 (406)
T cd00834 295 IDYINA 300 (406)
T ss_pred CCEEec
Confidence 998863
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=161.17 Aligned_cols=242 Identities=19% Similarity=0.193 Sum_probs=172.1
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+-.++-.+|| .+|+++|+++|+|++.|+++|++.|++|+||++|+||+..+-....... ..
T Consensus 153 ~a~Risy~l~l--~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~----------------~~ 214 (1061)
T COG3321 153 AAGRISYVLGL--SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYL----------------FS 214 (1061)
T ss_pred HHHHHHHHhcC--CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceee----------------ee
Confidence 66778888999 6999999999999999999999999999999999999987544221100 00
Q ss_pred CcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCH
Q psy12877 93 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF 172 (814)
Q Consensus 93 ~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~ 172 (814)
+.|. +.+|-..+
T Consensus 215 --------------------------------------------~~g~-------------------ls~~g~c~----- 226 (1061)
T COG3321 215 --------------------------------------------AGGM-------------------LSPDGRCK----- 226 (1061)
T ss_pred --------------------------------------------cccC-------------------cCCCCcce-----
Confidence 0011 11222221
Q ss_pred HhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC-----cHHHHHHHH
Q psy12877 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI-----APAFAIPTL 247 (814)
Q Consensus 173 e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~-----~~~~a~~~a 247 (814)
++..+.+|++ .++|++++||-..+.|.+-|.++++.|+|.+.+.+....-.+ +-...++++
T Consensus 227 -------~fd~~adG~v-------~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~a 292 (1061)
T COG3321 227 -------AFDADADGYV-------RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREA 292 (1061)
T ss_pred -------ecccCCCCEE-------EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHH
Confidence 2222234566 559999999999999999999999999999998775433222 236799999
Q ss_pred HHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCC-CC-CcccCCCCccccCCCCChHHHHHHHHHHHHHcC----
Q psy12877 248 LKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDID-PS-KVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG---- 316 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~-~~-~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g---- 316 (814)
|+++|+.|++|+|+|.|-.-+.. ++..+ ..++-. ++ +.-...=+..+||.-.|.|+..++..+++|+++
T Consensus 293 l~~a~i~p~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~ 372 (1061)
T COG3321 293 LADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPP 372 (1061)
T ss_pred HHhcCCCcccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCC
Confidence 99999999999999999876632 22222 223322 12 222222233489999999999999999999971
Q ss_pred ---------CCCC---------ccccccCccccccccceeEEecCCcceeEEEecCc
Q psy12877 317 ---------QKGQ---------LSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 317 ---------~~gl---------~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
...+ ....|+... .+|++.+++++-||.+..++||.+.
T Consensus 373 ~l~~~~~np~i~~~~sp~~v~~~~~~W~~~~-~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 373 TLHFDTPNPEIDFDSSPFVVPTEATPWPTGG-GPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred cCCCCCCCcCCccccCCeEeecCCcCCCCCC-CCceeeeeccCCCCCceEEEEeecC
Confidence 1111 111465555 6788888898999999999998543
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.3e-13 Score=148.91 Aligned_cols=189 Identities=20% Similarity=0.142 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC--------------------------------------CC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL--------------------------------------GQ 439 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~--------------------------------------~~ 439 (814)
...|+..|+++||+|+|++..+.+ ++++|+..+... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 456888899999999999653322 367776543210 01
Q ss_pred hHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccc
Q psy12877 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 519 (814)
Q Consensus 440 ~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~ 519 (814)
..+..++...|+ +.|.+++.++|+||+.||..|+++|++|++|++||||+|.... |..
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~~------------------- 210 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PDM------------------- 210 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHH-------------------
Confidence 245567788888 4699999999999999999999999999999999999997431 100
Q ss_pred cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCC
Q psy12877 520 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 599 (814)
Q Consensus 520 ~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~ 599 (814)
+. .+ ...+.. +.. ...| .|+.. | +++.
T Consensus 211 --~~------~~--------~~~~~l----------s~~---~~~p--~~d~~--~---~~r~----------------- 237 (398)
T PRK06519 211 --LL------LY--------ELGGLL----------LKG---GWAP--VWSRG--G---EDGG----------------- 237 (398)
T ss_pred --HH------HH--------HHcCcc----------CCC---CCCc--hhccC--c---cCCC-----------------
Confidence 00 00 000000 000 0001 01100 0 0111
Q ss_pred HHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhc
Q psy12877 600 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNG 679 (814)
Q Consensus 600 ~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~ 679 (814)
| -.++|||+++||++++.|+++|.+++++|+|++... .+. ...+...+++++|+++
T Consensus 238 ---------------G-------~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~-~~~-~~~~~~~am~~AL~~A 293 (398)
T PRK06519 238 ---------------G-------FILGSGGAFLVLESREHAEARGARPYARISGVESDR-ARR-APGDLEASLERLLKPA 293 (398)
T ss_pred ---------------C-------eeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC-CCC-ChHHHHHHHHHHHHHC
Confidence 1 128999999999999999999999999999997433 232 2346678999999999
Q ss_pred CCCcceeEeh
Q psy12877 680 GQLSQFWYDE 689 (814)
Q Consensus 680 ~~~sq~~y~e 689 (814)
++..|++|..
T Consensus 294 gl~~~IdyI~ 303 (398)
T PRK06519 294 GGLAAPTAVI 303 (398)
T ss_pred CCcccCCEEE
Confidence 9988999976
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.8e-13 Score=151.75 Aligned_cols=189 Identities=18% Similarity=0.169 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC-------------------CCChHHHHHHHHcCCCCCccEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG-------------------LGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~-------------------~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
..+|+.+|+++||+|+|++++++|. +++|+..+.. .....+..++..+|+. .|.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 4789999999999999999888775 6666542210 0123566788889984 5899
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+++.+|+||..||..|+++|++|.+|++||+|+|.+..... +. .+
T Consensus 165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~----------------------~~------~~------- 209 (421)
T cd00833 165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDM----------------------FV------GF------- 209 (421)
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHH----------------------HH------HH-------
Confidence 99999999999999999999999999999999997642100 00 00
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt 618 (814)
...|.- .+... ..|. . .
T Consensus 210 -~~~~~l------------------~~~~~----~~pf----------------------------------~------~ 226 (421)
T cd00833 210 -SKAGML------------------SPDGR----CRPF----------------------------------D------A 226 (421)
T ss_pred -hhCCCC------------------CCCCC----CCCC----------------------------------C------C
Confidence 000000 00000 0010 0 1
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-----CCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
..+...++|||+++||++++.|++.+.+++++|+|++...+.... ...+...+++++|+++++ .+|++|.+-
T Consensus 227 ~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~ 304 (421)
T cd00833 227 DADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEA 304 (421)
T ss_pred CCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEe
Confidence 123344899999999999999999999999999999976542211 133556799999999998 579999863
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.7e-13 Score=149.42 Aligned_cols=192 Identities=19% Similarity=0.158 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC-------------C--------------CChHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG-------------L--------------GQAPCRQAVIFAG 450 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~-------------~--------------~~~~a~~~a~~~G 450 (814)
...++..|+++||+|+|+++.+.+ ++++|+..+.. . ....+..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 456888999999999999765443 35666532210 0 0125566788888
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||..|+++|++|++|++|++|+|..+....
T Consensus 151 l~--Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~------------------------------- 197 (406)
T PRK07967 151 IK--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMS------------------------------- 197 (406)
T ss_pred CC--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHH-------------------------------
Confidence 84 689999999999999999999999999999999999986431000
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
.+ ++..-..+.+. ...|....+ |.+ +++
T Consensus 198 ~~----------------f~~~~~ls~~~--~~~p~~~~r----PFd-~~r----------------------------- 225 (406)
T PRK07967 198 CL----------------FDAMGALSTKY--NDTPEKASR----AYD-ANR----------------------------- 225 (406)
T ss_pred HH----------------HHHhhhhccCC--CCCCCcCCc----CCc-CCC-----------------------------
Confidence 00 00000000000 000110000 110 000
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC---CCchHHhHHHHHHHhcCCCcceeE
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTLLKNGGQLSQFWY 687 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~---~~~g~~~A~~~~~~~~~~~sq~~y 687 (814)
+| -.++|||+++||++.+.|+++|.+++++|+|++...+.... .+.+...+++++|+..+ .||+|
T Consensus 226 ---~G-------~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~~Idy 293 (406)
T PRK07967 226 ---DG-------FVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--TPIDY 293 (406)
T ss_pred ---Cc-------eeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--CCccE
Confidence 12 22899999999999999999999999999999987653222 23456789999999766 39999
Q ss_pred ehh
Q psy12877 688 DEN 690 (814)
Q Consensus 688 ~e~ 690 (814)
.+-
T Consensus 294 i~a 296 (406)
T PRK07967 294 INT 296 (406)
T ss_pred EEc
Confidence 864
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.5e-12 Score=144.99 Aligned_cols=191 Identities=20% Similarity=0.174 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC------------C--------------ChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL------------G--------------QAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~------------~--------------~~~a~~~a~~~Gl 451 (814)
...|+..++.+||+|+|++++.++ +|++|+..+... + ...+..++...|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 456888999999999999876554 467775432110 0 1234567778888
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
+.|.++++++|+||+.||..|+++|++|+ |++|++|+|..... . . +. .+
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p-~------------------~---~~------~~ 199 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCP-W------------------G---WV------AQ 199 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCH-H------------------H---HH------HH
Confidence 46999999999999999999999999999 99999999874321 0 0 00 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
.+.|. + +. ...|... .|| |+
T Consensus 200 --------~~~~~-------l---s~----~~~p~~~-------------------------------------~rP-Fd 219 (399)
T cd00832 200 --------LSSGR-------L---ST----SDDPARA-------------------------------------YLP-FD 219 (399)
T ss_pred --------Hhccc-------c---CC----CCCCCCC-------------------------------------cCC-Cc
Confidence 00000 0 00 0001000 011 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC--CCCchHHhHHHHHHHhcCCC-cceeEe
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI--DFPIAPAFAIPTLLKNGGQL-SQFWYD 688 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~--~~~~g~~~A~~~~~~~~~~~-sq~~y~ 688 (814)
+. -|--.++|||+++||++++.|+++|.+++++|.|++...+... ..+.+...+++++|+++++. .|++|.
T Consensus 220 ~~------~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v 293 (399)
T cd00832 220 AA------AAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVV 293 (399)
T ss_pred CC------CCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEE
Confidence 00 1122389999999999999999999999999999998665322 12445668999999999994 799998
Q ss_pred h
Q psy12877 689 E 689 (814)
Q Consensus 689 e 689 (814)
+
T Consensus 294 ~ 294 (399)
T cd00832 294 F 294 (399)
T ss_pred E
Confidence 6
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=145.75 Aligned_cols=192 Identities=20% Similarity=0.219 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHcCCCC---cCcceEEEEecccCCC--------------------------CChHHHHHHHHcCCCC
Q psy12877 403 TKLGAVAIESAIQKANMDK---SDVQEVYMGNVCQAGL--------------------------GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~---~dID~vivG~~~~~~~--------------------------~~~~a~~~a~~~Gl~~ 453 (814)
..++..++++||+|||++. ..+ ++++|+..+... ....+..++...|+
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~-- 160 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA-- 160 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--
Confidence 4578889999999999743 222 466776532210 01234556777777
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
..|.+++.++|+|++.||.+|+++|++|++|++|++|+|....... ... +
T Consensus 161 ~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~-------------------~~~---------f-- 210 (418)
T PRK07910 161 KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVP-------------------IAG---------F-- 210 (418)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHH-------------------HHH---------H--
Confidence 4688999999999999999999999999999999999987532100 000 0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccC
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE 613 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~ 613 (814)
.+.|.. .+.. ...|.+.. || |++.
T Consensus 211 ------~~~~~~---------ls~~---~~~~~~~~-------------------------------------rP-Fd~~ 234 (418)
T PRK07910 211 ------AQMRIV---------MSTN---NDDPAGAC-------------------------------------RP-FDKD 234 (418)
T ss_pred ------HhcCCc---------cccC---CCCCCCCc-------------------------------------CC-CcCC
Confidence 000100 0000 00011110 11 1100
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-CcceeE
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQFWY 687 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~~y 687 (814)
-|--.++||++++||++++.|+++|.+++++|+|++...+ .|...+.+...+++++|+++++ ..|++|
T Consensus 235 ------~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ 308 (418)
T PRK07910 235 ------RDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDH 308 (418)
T ss_pred ------CCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCE
Confidence 1122389999999999999999999999999999998764 3444455677899999999999 579999
Q ss_pred eh
Q psy12877 688 DE 689 (814)
Q Consensus 688 ~e 689 (814)
.+
T Consensus 309 ie 310 (418)
T PRK07910 309 VN 310 (418)
T ss_pred EE
Confidence 86
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=145.75 Aligned_cols=193 Identities=20% Similarity=0.246 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHcCCCC-cCcc----eEEEEecccCC-----------------C---------CChHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDK-SDVQ----EVYMGNVCQAG-----------------L---------GQAPCRQAVIFAG 450 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~-~dID----~vivG~~~~~~-----------------~---------~~~~a~~~a~~~G 450 (814)
...|+..++.+||+|||+.. ..++ ++++|+..+.. . ....+..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 35688899999999999843 2222 57777643211 0 0124566788888
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+ +.|.+++.++|+||+.||..|+++|++|++|++|+||+|..+....
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~------------------------------- 199 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEA------------------------------- 199 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHH-------------------------------
Confidence 8 4699999999999999999999999999999999999987431100
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
. .++.+-..+..+ ..|....+ |.+ ++.
T Consensus 200 ~----------------~f~~l~~~~~~~---~~~~~~~r----Pfd-~~~----------------------------- 226 (405)
T PRK09116 200 A----------------VFDTLFATSTRN---DAPELTPR----PFD-ANR----------------------------- 226 (405)
T ss_pred H----------------HHHHhhhhccCC---CCCCCCCC----CCc-CCC-----------------------------
Confidence 0 000000000000 01110000 110 001
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC---CchHHhHHHHHHHhcCC-Cccee
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF---PIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~---~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
+| ..++|||+++||++++.|+++|.+++++|+|++...+..... ..+...+++++|+++++ ..|++
T Consensus 227 ---~G-------~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId 296 (405)
T PRK09116 227 ---DG-------LVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIG 296 (405)
T ss_pred ---CC-------EeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcC
Confidence 12 238999999999999999999999999999999876532221 23456799999999999 47899
Q ss_pred Eehh
Q psy12877 687 YDEN 690 (814)
Q Consensus 687 y~e~ 690 (814)
|.+-
T Consensus 297 ~I~~ 300 (405)
T PRK09116 297 YVNA 300 (405)
T ss_pred EEEC
Confidence 8863
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.37 E-value=9e-12 Score=141.64 Aligned_cols=193 Identities=20% Similarity=0.149 Sum_probs=125.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcce------------------EEEEecccC---------------C-------CCCh
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQE------------------VYMGNVCQA---------------G-------LGQA 440 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~------------------vivG~~~~~---------------~-------~~~~ 440 (814)
....|+..++++||+|||++..+.+. ++.+..... . .-+.
T Consensus 74 ~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (425)
T PRK06501 74 LSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGS 153 (425)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccH
Confidence 34678889999999999996443221 112111000 0 0113
Q ss_pred HHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccc
Q psy12877 441 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 520 (814)
Q Consensus 441 ~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (814)
.+..++..+|+ +.+.++++.+|+|++.||..|+++|++|++|++||+|+|.... |
T Consensus 154 ~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~---------------------- 208 (425)
T PRK06501 154 IADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-A---------------------- 208 (425)
T ss_pred HHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-H----------------------
Confidence 45667888898 4688999999999999999999999999999999999985311 0
Q ss_pred ccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-hhhcCCccccccceeccCCCCCcceEeccCCccccCC
Q psy12877 521 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD-AYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 599 (814)
Q Consensus 521 ~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~-a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~ 599 (814)
+.+..+..... .... ..|..
T Consensus 209 --------------------------~~~~~~~~~~~-ls~~~~~~~~-------------------------------- 229 (425)
T PRK06501 209 --------------------------EALIRFSLLSA-LSTQNDPPEK-------------------------------- 229 (425)
T ss_pred --------------------------HHHHHHHHhhc-cccCCCCCCc--------------------------------
Confidence 00000100000 0000 00000
Q ss_pred HHHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC-----CCCchHHhHHHH
Q psy12877 600 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI-----DFPIAPAFAIPT 674 (814)
Q Consensus 600 ~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~-----~~~~g~~~A~~~ 674 (814)
..|| |++. -+.-.++|||+++||++++.|+++|.+++++|.|++...+... ..+.+...++++
T Consensus 230 -----~~rp-fd~~------r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~ 297 (425)
T PRK06501 230 -----ASKP-FSKD------RDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRA 297 (425)
T ss_pred -----ccCC-CCCC------CCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHH
Confidence 0111 1110 0122389999999999999999999999999999997655322 222345679999
Q ss_pred HHHhcCC-CcceeEeh
Q psy12877 675 LLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 675 ~~~~~~~-~sq~~y~e 689 (814)
+|+++++ ..|++|.+
T Consensus 298 AL~~agi~p~dId~i~ 313 (425)
T PRK06501 298 ALADAGLTPEQIDYIN 313 (425)
T ss_pred HHHHcCCCHHHcCEEE
Confidence 9999999 47899986
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=5e-12 Score=143.26 Aligned_cols=197 Identities=15% Similarity=0.144 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc--eEEEEecccC-------------CC------------CChHHHHHHHHcCCCCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ--EVYMGNVCQA-------------GL------------GQAPCRQAVIFAGLPKS 454 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID--~vivG~~~~~-------------~~------------~~~~a~~~a~~~Gl~~~ 454 (814)
..+|+..++++||+|+|+++.+.+ ++++|..... .. ....+..++..+|+.
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 567999999999999998643222 3555543210 00 012455677888984
Q ss_pred ccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHH
Q psy12877 455 TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 455 ~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
.|.++++++|+|++.||..|+++|++|++|++||+|++.... +. .... |
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~------------------~~~~---------~--- 206 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YW------------------ECQA---------L--- 206 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HH------------------HHHH---------H---
Confidence 588999999999999999999999999999999999864211 00 0000 0
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKEN 614 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~ 614 (814)
...|. + +..+- ..+|.+..+ | |++
T Consensus 207 -----~~~~~-------l---~~~~~-~~~p~~~~r-------------------------------------P-fd~-- 230 (410)
T PRK07103 207 -----RSLGA-------M---GSDRF-ADEPEAACR-------------------------------------P-FDQ-- 230 (410)
T ss_pred -----HHccc-------c---ccCcc-CCCcccCcC-------------------------------------C-CCC--
Confidence 00000 0 00000 002222111 1 111
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC---CCCCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP---IDFPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p---~~~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
..|+..++|||+++||++++.|+++|.+++++|+|++...+.- .....+...+++++|+++++ .+|++|.+-
T Consensus 231 ----~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~ 306 (410)
T PRK07103 231 ----DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNP 306 (410)
T ss_pred ----CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEc
Confidence 1345669999999999999999999999999999999865421 12233556799999999999 479999864
Q ss_pred h
Q psy12877 691 T 691 (814)
Q Consensus 691 t 691 (814)
.
T Consensus 307 h 307 (410)
T PRK07103 307 H 307 (410)
T ss_pred c
Confidence 3
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.2e-11 Score=134.76 Aligned_cols=183 Identities=17% Similarity=0.133 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHHHHHcC-CCCcCcceEEEEecc--cCCC---CChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKAN-MDKSDVQEVYMGNVC--QAGL---GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIML 473 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAG-l~~~dID~vivG~~~--~~~~---~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~ 473 (814)
.+..+|+..|++++|++++ +++++||.+++.... .... .......++..+|+....+.++++.+|+||..||..
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~ 142 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHH
Confidence 4678899999999999999 788999987664221 0111 122456677788986556789999999999999999
Q ss_pred HHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHH
Q psy12877 474 ASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 553 (814)
Q Consensus 474 Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a 553 (814)
|+++|++|.+|.+|++|+|.++.... + +
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~-------------------------------~------------------~--- 170 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPT-------------------------------L------------------A--- 170 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHH-------------------------------H------------------H---
Confidence 99999999999999999998763210 0 0
Q ss_pred HHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccccCCCCccchhhhhhh
Q psy12877 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACV 633 (814)
Q Consensus 554 ~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvv 633 (814)
.+.. ....+.. ++. +.-.++|||+++|
T Consensus 171 --~~~~-----~~~l~~~-------~~~---------------------------------------~G~v~GEGA~a~v 197 (348)
T PRK06147 171 --HYEA-----RDRLLTS-------QNS---------------------------------------NGFIPGEAAAAVL 197 (348)
T ss_pred --HHHH-----hhccCCC-------CCC---------------------------------------CceeeeceEEEEE
Confidence 0000 0000000 000 1122899999999
Q ss_pred hcCHHHHHHcCCCceEEEEEeeeccCC------CCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 634 LMTEEAVRKFNAKPLARIIAYFDAATE------PIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 634 L~s~e~A~~~g~~p~a~I~g~~~~~~~------p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
|++.+.|++.+.++++ .|++...+. +...+.+...+++++|+++++ ..|++|..
T Consensus 198 Le~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ 258 (348)
T PRK06147 198 LGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRI 258 (348)
T ss_pred EccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 9999999999999887 666654332 112345677899999999987 57898876
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.5e-11 Score=131.10 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=53.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+.+++..+|+. ..|.++++.+|+||+.+|..|.++|++|.+|+|||+|+|++|.
T Consensus 88 ~~~~~~~i~~~lG~~-~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 145 (319)
T PRK09352 88 FPSTACLVQARLGAK-NAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSR 145 (319)
T ss_pred CchHHHHHHHHhCCC-CCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 356778899999995 7899999999999999999999999999999999999999764
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-10 Score=130.88 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=49.9
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
+..+-.++..+|+. .|+++++.+|+|++.+|..|.++|++|.+|.|||+|+|.+|.
T Consensus 132 p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 187 (372)
T PRK07515 132 PAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSG 187 (372)
T ss_pred cHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccc
Confidence 33566788889984 789999999999999999999999999999999999999764
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-10 Score=126.04 Aligned_cols=58 Identities=19% Similarity=0.258 Sum_probs=53.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+.+++..+|++ ..+.+.++.+|+|+..+|..|.++|++|.++.||++++|.+|.
T Consensus 89 ~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~ 146 (325)
T PRK12879 89 FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSK 146 (325)
T ss_pred CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcC
Confidence 467889999999997 5899999999999999999999999999999999999999764
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=128.88 Aligned_cols=93 Identities=17% Similarity=0.173 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ .++++++.+|+||+.+|..|++.|++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~ 171 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRS 171 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999987654433444567788889985 57899999999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|.+|.||++|+|.++
T Consensus 172 g~~~~vLvv~~e~~s 186 (372)
T PRK07515 172 GSARRVLVVNPEICS 186 (372)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999999875
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-10 Score=124.69 Aligned_cols=180 Identities=18% Similarity=0.117 Sum_probs=129.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
-|..|-.+...+|+. +++++.++.+|++.+.++..|..+|++|.+..|||+|.|.+|+.--
T Consensus 88 ~Ps~A~~vq~~LG~~-~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld------------------ 148 (323)
T COG0332 88 FPSTACLVQARLGLG-GAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILD------------------ 148 (323)
T ss_pred CChHHHHHHHHhCCC-CcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCC------------------
Confidence 366888999999998 6999999999999999999999999999999999999999876210
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
T Consensus 149 -------------------------------------------------------------------------------- 148 (323)
T COG0332 149 -------------------------------------------------------------------------------- 148 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEec-----------CCC---C-
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA-----------TEP---I- 234 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~-----------~~p---~- 234 (814)
+-.+..|-.++|||+||||...+ .+.+.-.. .+.+-+... .++ .
T Consensus 149 ------------------~~dR~t~vlFgDGAgAvvl~~~~--~~~~i~~~-~l~sdg~~~~~l~~~~~~~~~~~~~~~~ 207 (323)
T COG0332 149 ------------------WTDRDTCVLFGDGAGAVVLEATE--DDNGILDT-DLGSDGSQGDLLYLPGGGSATPKEESGG 207 (323)
T ss_pred ------------------HhhccceEEEcCCceEEEEecCC--CCcCeeee-eeeccccCCCeeeccCCCCccccccccc
Confidence 00012334478999999999775 12211110 111111100 000 0
Q ss_pred -CC-CCc----------HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChH
Q psy12877 235 -DF-PIA----------PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSG 302 (814)
Q Consensus 235 -~~-~~~----------~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG 302 (814)
.+ ..+ ...+++++|+++|++++|||++-.|.+.....-...+.||++++++..+ -+-+|+|+
T Consensus 208 ~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~------~~~yGNts 281 (323)
T COG0332 208 GLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVT------VDKYGNTS 281 (323)
T ss_pred cceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhH------HHHhcccc
Confidence 00 001 1358899999999999999999999999999999999999988866442 35567777
Q ss_pred HHHHHHHHHHHHc
Q psy12877 303 ARIVIHLCHALKS 315 (814)
Q Consensus 303 ~~~l~e~v~qLr~ 315 (814)
+..+.-++..+-+
T Consensus 282 aAsiplaL~~~~~ 294 (323)
T COG0332 282 AASIPLALDEALR 294 (323)
T ss_pred cchHHHHHHHHhh
Confidence 7777766666643
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=122.82 Aligned_cols=91 Identities=20% Similarity=0.258 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+++..+|+.+|+++||+++||+++|||.+++|.... ....+..++..+|+ |.+.++.+|+|+..+|..|+..|
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999997421 23467778888897 46999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+|+||+++.|..+.
T Consensus 120 ~SG~ad~VLVV~Ssh~S~ 137 (327)
T TIGR02845 120 DGGFADRVLAATSSHYAT 137 (327)
T ss_pred hCCCCCEEEEEEecccch
Confidence 999999999999887763
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.9e-10 Score=124.70 Aligned_cols=58 Identities=17% Similarity=0.252 Sum_probs=53.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+.+++..+|++ ..|+++++.+|+|++.+|..|+++|++|.++++|++|+|.++.
T Consensus 87 ~~~~a~~l~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~ 144 (318)
T TIGR00747 87 FPSAACMVQAYLGIK-GIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSS 144 (318)
T ss_pred CChHHHHHHHHhCCC-CCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcC
Confidence 456788999999997 6899999999999999999999999999999999999999754
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-10 Score=126.38 Aligned_cols=60 Identities=25% Similarity=0.295 Sum_probs=55.6
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..+..+.+++..+|++..++++.++.+|+|++.++..|.+.|++|.++.|||++.|.+|.
T Consensus 96 ~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~ 155 (338)
T PRK09258 96 LEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESARE 155 (338)
T ss_pred CCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccch
Confidence 356789999999999867899999999999999999999999999999999999999765
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.7e-10 Score=121.07 Aligned_cols=92 Identities=23% Similarity=0.290 Sum_probs=79.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 398 VSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 398 ~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
+++...+|+.+|+++||+++||+++|||.+++|.... ....+..++..+|+ |.+.++.+|+|+..++..|+.+
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 3568889999999999999999999999999997531 22356667777786 6899999999999999999999
Q ss_pred HHcCCCCeEEEEeeecccc
Q psy12877 478 LSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~ 496 (814)
|++|.+|+||+++.|.++.
T Consensus 125 I~SG~ad~VLVV~Ssh~s~ 143 (337)
T PRK08304 125 IDGGFADRVLAATSSHFAT 143 (337)
T ss_pred HhcCCCCEEEEEEcchhhh
Confidence 9999999999999987764
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.8e-10 Score=148.35 Aligned_cols=150 Identities=19% Similarity=0.213 Sum_probs=106.1
Q ss_pred HHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccc
Q psy12877 441 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 520 (814)
Q Consensus 441 ~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~ 520 (814)
++..++..+|| +.|.++|+++|+|++.||++|++.|++|++|++|+||++.... |. .
T Consensus 185 ~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~------------------~-- 241 (2582)
T TIGR02813 185 ISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PF------------------M-- 241 (2582)
T ss_pred HHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HH------------------H--
Confidence 46677888888 4699999999999999999999999999999999999976421 10 0
Q ss_pred ccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCH
Q psy12877 521 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF 600 (814)
Q Consensus 521 ~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~ 600 (814)
+++. .+.|. . .+.+..+ |.+ ++.
T Consensus 242 ---------~~~f------s~~~~----------------l--S~~g~cr----pFD-~~a------------------- 264 (2582)
T TIGR02813 242 ---------YMSF------SKTPA----------------F--TTNEDIQ----PFD-IDS------------------- 264 (2582)
T ss_pred ---------HHHH------HhccC----------------c--CCCCCcc----CCC-CCC-------------------
Confidence 0000 00000 0 1111100 110 000
Q ss_pred HHhhccccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCC--CCC---CchHHhHHHHH
Q psy12877 601 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP--IDF---PIAPAFAIPTL 675 (814)
Q Consensus 601 e~l~~~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p--~~~---~~g~~~A~~~~ 675 (814)
+|. .++||+++|||.+.+.|++.|.++++.|+|++...+.. ..+ ..+...+++++
T Consensus 265 -------------dG~-------v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~A 324 (2582)
T TIGR02813 265 -------------KGM-------MIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRA 324 (2582)
T ss_pred -------------Ccc-------cccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHH
Confidence 122 28999999999999999999999999999999876532 111 23556799999
Q ss_pred HHhcCC-CcceeEehh
Q psy12877 676 LKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 676 ~~~~~~-~sq~~y~e~ 690 (814)
|+++|+ .++++|.|-
T Consensus 325 l~~Agi~p~~I~yIea 340 (2582)
T TIGR02813 325 YDDAGFAPHTCGLIEA 340 (2582)
T ss_pred HHHcCCCHHHCCEEEe
Confidence 999999 579999874
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.3e-10 Score=122.65 Aligned_cols=109 Identities=17% Similarity=0.175 Sum_probs=94.4
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
++++.++.....+.+..+|+.+|++++|+++|+++++||.+++++..+....+..+..++..+|+. ..+.++++.+|+|
T Consensus 37 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~~Cas 115 (319)
T PRK09352 37 RTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLSAACSG 115 (319)
T ss_pred hcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeeccccchh
Confidence 567765555566789999999999999999999999999999998765443445677888999995 5789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
|+.||..|++.|++|.+|++|++|+|+++.
T Consensus 116 g~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 145 (319)
T PRK09352 116 FVYALSTADQFIRSGAYKNVLVIGAEKLSR 145 (319)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 999999999999999999999999999863
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=120.61 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..++..+|+. ..|+++++.+|+|++.++..|.++|++|.++.+||+|+|.+|.
T Consensus 89 ~~~~v~~~Lg~~-~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~ 143 (326)
T CHL00203 89 SASQLQAEIGAT-RAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSK 143 (326)
T ss_pred hHHHHHHHhCCC-CCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhC
Confidence 456778888997 7899999999999999999999999999999999999999875
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=120.80 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=51.5
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
+..+-.++..+|++...+.+.++.+|+++..++..|.++|++|.++.+||++.|.++
T Consensus 87 p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~ 143 (345)
T TIGR00748 87 KPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQ 143 (345)
T ss_pred cchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecc
Confidence 345668889999976789999999999999999999999999999999999999875
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.1e-10 Score=120.42 Aligned_cols=116 Identities=17% Similarity=0.221 Sum_probs=100.2
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
+-+|.. ||.+..+.-...+.+..+|+.+|+++||++||++++|||.+++.+..+...-+..+..+...+|+. ..+++
T Consensus 31 dewI~~--rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~af 107 (323)
T COG0332 31 DEWIET--RTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAF 107 (323)
T ss_pred cceeee--ecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Cccee
Confidence 445544 455554433334688999999999999999999999999999999888777788899999999997 48999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccC
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~ 497 (814)
.++.+|++.+.+|..|...|++|.++.+||+|.|.+|+.
T Consensus 108 Dl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ 146 (323)
T COG0332 108 DLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRI 146 (323)
T ss_pred echhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhcc
Confidence 999999999999999999999999999999999999753
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-09 Score=119.04 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=52.3
Q ss_pred ChHHHHHHHHcCCCC-CcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 11 QAPCRQAVIFAGLPK-STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~-~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
+..+.+++..+|++. ..|+++++.+|+|++.++..|.++|++|.++.|||++.|.+|.
T Consensus 89 p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~ 147 (329)
T PRK07204 89 PCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSV 147 (329)
T ss_pred ccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccC
Confidence 456888999999974 3799999999999999999999999999999999999998664
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-09 Score=120.58 Aligned_cols=109 Identities=23% Similarity=0.270 Sum_probs=93.4
Q ss_pred eecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCC
Q psy12877 386 SRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCA 465 (814)
Q Consensus 386 ~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~ca 465 (814)
.+|++.++....++.+..+|+.+|+++||+++|+++++||.+++|++.+.... ..+..+...+|+. ..++++++.+|+
T Consensus 35 ~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~-~~~~~v~~~Lg~~-~~~~~~v~~~Ca 112 (326)
T CHL00203 35 TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLF-GSASQLQAEIGAT-RAVAFDITAACS 112 (326)
T ss_pred eccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCC-chHHHHHHHhCCC-CCceeeecccch
Confidence 67788776666677899999999999999999999999999999976543221 2345677788987 578899999999
Q ss_pred cHHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 466 Sg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
||+.++..|.+.|++|.++.+|++|+|.++.
T Consensus 113 sg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~ 143 (326)
T CHL00203 113 GFILALVTATQFIQNGSYKNILVVGADTLSK 143 (326)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEehhhhC
Confidence 9999999999999999999999999999874
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.8e-10 Score=121.27 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=54.1
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+..++..+|++ ..|.++++.+|+|++.+|.+|.++|++|.++.||+++.|.++.
T Consensus 86 ~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 143 (320)
T cd00830 86 FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSR 143 (320)
T ss_pred CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 366889999999998 8999999999999999999999999999999999999999765
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-09 Score=119.87 Aligned_cols=55 Identities=13% Similarity=0.205 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+.+++..+|++ ..|++.++.+|+|++.+|..|.+.|++|.++.||++|.|.+|.
T Consensus 134 ~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 134 SAPQVQAALGCT-NALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred HHHHHHHHhCCC-CCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence 577899999998 8999999999999999999999999999999999999999764
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-09 Score=118.66 Aligned_cols=108 Identities=19% Similarity=0.254 Sum_probs=92.6
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
++.+..+.....+.++.+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..+.++++.+|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~~C~s 114 (318)
T TIGR00747 36 RTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSAACAG 114 (318)
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehhhhhHH
Confidence 355544444455689999999999999999999999999999998765544455678899999997 4789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
|..+|..|++.|++|.++++|++|+|.++
T Consensus 115 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~~ 143 (318)
T TIGR00747 115 FIYALSVAKQYIESGKYKTVLVVGAEKLS 143 (318)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence 99999999999999999999999999875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.8e-09 Score=117.08 Aligned_cols=111 Identities=14% Similarity=0.194 Sum_probs=97.5
Q ss_pred EeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC
Q psy12877 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN 461 (814)
Q Consensus 382 IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~ 461 (814)
-+|+.+.+|... +.+..+|+.+|++++|+++|+++++||.+++++..+....+..+..++..+|++ ..+.++++
T Consensus 33 ~~gi~~r~~~~~-----~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~ 106 (324)
T cd00827 33 TTGIGQRHMAGD-----DEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK 106 (324)
T ss_pred eeecceeEecCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh
Confidence 367777666543 478899999999999999999999999999998766544566788899999997 78999999
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCc
Q psy12877 462 KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498 (814)
Q Consensus 462 ~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p 498 (814)
.+|+||+.|+..|++.|++|.++.+|++|+|+++..+
T Consensus 107 ~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~ 143 (324)
T cd00827 107 QACYGGTAALQLAANLVESGPWRYALVVASDIASYLL 143 (324)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc
Confidence 9999999999999999999999999999999998765
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.7e-09 Score=116.48 Aligned_cols=55 Identities=15% Similarity=0.185 Sum_probs=50.0
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeecc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~ 65 (814)
+..+.+++..+|++...+++.++.+|+++..++..|.++|++|.++.||+.+.|.
T Consensus 88 p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~ 142 (347)
T PRK04262 88 KPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADT 142 (347)
T ss_pred ccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Confidence 3456688899999756889999999999999999999999999999999999997
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.2e-09 Score=116.62 Aligned_cols=58 Identities=17% Similarity=0.252 Sum_probs=54.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+.+++..+|++ .+|.++++.+|+|++.++..|.++|++|.++.||++|+|.++.
T Consensus 84 ~~~~~~~i~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~ 141 (324)
T cd00827 84 GKSAATYLAELLGLT-NAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASY 141 (324)
T ss_pred CccHHHHHHHHcCCC-CCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhh
Confidence 567899999999998 8999999999999999999999999999999999999999875
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-09 Score=115.69 Aligned_cols=53 Identities=26% Similarity=0.261 Sum_probs=48.9
Q ss_pred HHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 15 r~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++..+|++ ..|++.++.+|+|++.+|..|.++|++|.++.|||+|+|.+|.
T Consensus 104 ~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 104 SMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASR 156 (378)
T ss_pred HHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchh
Confidence 4667788987 5899999999999999999999999999999999999999886
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.8e-09 Score=116.09 Aligned_cols=98 Identities=23% Similarity=0.272 Sum_probs=89.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.++.+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...+.+.++.+|+|+..||..|.+.|
T Consensus 58 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i 137 (338)
T PRK09258 58 GTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANMI 137 (338)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999876555566788889999999866789999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++.+|+++.|.++.
T Consensus 138 ~~g~~~~~Lvv~~e~~s~ 155 (338)
T PRK09258 138 ELGQIDYALVVSGESARE 155 (338)
T ss_pred HcCCCCEEEEEEecccch
Confidence 999999999999998763
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-08 Score=113.30 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=125.1
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.+..+-+++..+|++..++++.++.+|++++.++..|..+|++|..+ +|+++.|..|..-.
T Consensus 96 ~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~~~------------------ 156 (353)
T PRK12880 96 MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKFIH------------------ 156 (353)
T ss_pred CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhccCC------------------
Confidence 56789999999999878899999999999999999999999999999 88888888664110
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+++ +
T Consensus 157 ------------------------------------------------------------------------~~d--~-- 160 (353)
T PRK12880 157 ------------------------------------------------------------------------PKN--M-- 160 (353)
T ss_pred ------------------------------------------------------------------------ccc--C--
Confidence 000 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC----------CCC-----
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----------EPI----- 234 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~----------~p~----- 234 (814)
+. +..++|||+|+||...+... +...+...+...+ .|.
T Consensus 161 -------~~---------------~~lFGDGAaA~vl~~~~~~~-----~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~ 213 (353)
T PRK12880 161 -------NL---------------APIFGDGVSATLIEKTDFNE-----AFFELGSDGKYFDKLIIPKGAMRIPKADIFN 213 (353)
T ss_pred -------Cc---------------eeeecccceEEEEEecCCCC-----ceEEEEecCCCCCeEEecCCCcCCCcccccc
Confidence 00 11257999999997432110 1111211111000 000
Q ss_pred ---C-----------C-CCcH----------HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCC
Q psy12877 235 ---D-----------F-PIAP----------AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHG 289 (814)
Q Consensus 235 ---~-----------~-~~~~----------~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~G 289 (814)
. + ..+. ..+++++|+++|++++|||+|-+|.+.....-...+.||++++++-.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~-- 291 (353)
T PRK12880 214 DDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPN-- 291 (353)
T ss_pred ccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh--
Confidence 0 0 0011 24788999999999999999999999999888999999999987621
Q ss_pred CCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 290 GAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 290 G~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
..-.-+|++++..+.-++.++..
T Consensus 292 ---~~l~~~GNtssasip~~L~~~~~ 314 (353)
T PRK12880 292 ---FIMEKYANLSACSLPALLCELDT 314 (353)
T ss_pred ---hhHHhhCCHHHHHHHHHHHHHHH
Confidence 11245677888887777777764
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.1e-09 Score=114.83 Aligned_cols=100 Identities=17% Similarity=0.273 Sum_probs=87.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...+.+.++.+|+++..+|..|++.|
T Consensus 47 ~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i 126 (345)
T TIGR00748 47 DEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLV 126 (345)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998765544344556778889999756789999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccccCc
Q psy12877 479 SLGHQDVMVAGGMESMSNVP 498 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~~p 498 (814)
++|.++.+|+++.|.++..|
T Consensus 127 ~sg~~~~vLVv~~d~~~~~~ 146 (345)
T TIGR00748 127 ASGMIKYGLAIGADTAQGAP 146 (345)
T ss_pred HcCCCCEEEEEEEeecccCC
Confidence 99999999999999986433
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.8e-09 Score=112.58 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=87.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.++.+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..+.++++.+|+|+..+|..|+++|
T Consensus 47 ~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i 125 (320)
T cd00830 47 GETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAGLI 125 (320)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHHHH
Confidence 478999999999999999999999999999998765544456788899999997 6789999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++++|++++|.++.
T Consensus 126 ~~g~~~~vLvv~~e~~s~ 143 (320)
T cd00830 126 RSGGAKNVLVVGAETLSR 143 (320)
T ss_pred HcCCCCEEEEEEehhhcc
Confidence 999999999999999863
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=112.28 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=87.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..+.+.++.+|+|+..||..|.+.|
T Consensus 50 ~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~~l 128 (325)
T PRK12879 50 EEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANGLI 128 (325)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHHHH
Confidence 468899999999999999999999999999988765555566788899999997 4689999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++.||++++|.++.
T Consensus 129 ~~g~~~~~Lvv~~e~~s~ 146 (325)
T PRK12879 129 TSGLYKKVLVIGAERLSK 146 (325)
T ss_pred HcCCCCEEEEEEehhhcC
Confidence 999999999999999863
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=114.77 Aligned_cols=96 Identities=23% Similarity=0.239 Sum_probs=83.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
.+..+|+.+|+++||+++|++++|||.+++++..+....+..+..+...+|++ ..++++++.+|+|++.+|..|.+.|+
T Consensus 61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~ 139 (378)
T PRK06816 61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSVK 139 (378)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999998765433333445677788987 46899999999999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|.++.+|++|+|.+|.
T Consensus 140 sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 140 AGESRNAVATASELASR 156 (378)
T ss_pred CCCCCEEEEEeEccchh
Confidence 99999999999999874
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.8e-09 Score=128.34 Aligned_cols=186 Identities=22% Similarity=0.208 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCCC-------------------ChHHHHHHHHcCCCCCccEEEeC
Q psy12877 405 LGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGLG-------------------QAPCRQAVIFAGLPKSTVCTTVN 461 (814)
Q Consensus 405 La~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~~-------------------~~~a~~~a~~~Gl~~~~~~~tv~ 461 (814)
|+.+.+.+||+|||+++..+. +|++|........ ...+..++..+++ ..|.++|+
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcccc
Confidence 888999999999999998887 4677755432110 1256778889999 47999999
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHHHH
Q psy12877 462 KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKK 541 (814)
Q Consensus 462 ~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~~~ 541 (814)
++|+|++.|+++|++.|++|++|++|+||+..+-...... . + ++
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~-------------------~----~-------------~~ 215 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSY-------------------L----F-------------SA 215 (1061)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCccee-------------------e----e-------------ec
Confidence 9999999999999999999999999999997654221100 0 0 00
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccC-CCccccC
Q psy12877 542 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKE-NGTVTAG 620 (814)
Q Consensus 542 ~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~-~~plt~~ 620 (814)
.| ...|.+..+. |++. +|.+
T Consensus 216 ~g------------------~ls~~g~c~~--------------------------------------fd~~adG~v--- 236 (1061)
T COG3321 216 GG------------------MLSPDGRCKA--------------------------------------FDADADGYV--- 236 (1061)
T ss_pred cc------------------CcCCCCccee--------------------------------------cccCCCCEE---
Confidence 00 0022222221 1100 1222
Q ss_pred CCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-----CCchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 621 NASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 621 d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
.++|+++|||-..+.|.+-|.++++.|+|.+...+-... -+.+....++++|+.+++ ..++.|.|..
T Consensus 237 ----~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaH 309 (1061)
T COG3321 237 ----RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAH 309 (1061)
T ss_pred ----EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEec
Confidence 789999999999999999999999999999976553111 113456789999999999 6899999854
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.6e-08 Score=113.46 Aligned_cols=108 Identities=19% Similarity=0.199 Sum_probs=90.6
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|++.++.....+.+..+|+.+|+++||+++|++++|||.+++++..+.... ..+..++..+|++ ..++++++.+|+|
T Consensus 81 ~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~-~~a~~v~~~LG~~-~~~~~dv~~~Ca~ 158 (379)
T PLN02326 81 RTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLF-GSAPQVQAALGCT-NALAFDLTAACSG 158 (379)
T ss_pred ccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccC-cHHHHHHHHhCCC-CCceeeccccchH
Confidence 4555544444456789999999999999999999999999999876543222 3466788889997 6789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
++.+|..|.+.|++|.++.+|++|.|.++.
T Consensus 159 ~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 159 FVLGLVTAARFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence 999999999999999999999999999863
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.4e-08 Score=107.72 Aligned_cols=57 Identities=18% Similarity=0.054 Sum_probs=51.2
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHC-CCcCEEEEEeeccCCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL-GHQDVMVAGGMESMSN 68 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~s-G~~d~vLa~G~e~~s~ 68 (814)
+..+.+++..+|++ ..+++.++.+|++++.+|..|.++|++ |.++.+|+++.|.++.
T Consensus 91 p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 91 WSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred CchHHHHHHHhCCC-CcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccc
Confidence 34578899999997 789999999999999999999999999 9999999999988654
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.6e-08 Score=110.16 Aligned_cols=59 Identities=17% Similarity=0.080 Sum_probs=54.0
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+-.++..+|++..++++.++ .+|++++.+|..|..+|++|..+.||++++|.+|.
T Consensus 120 ~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 120 TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSL 179 (361)
T ss_pred CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccc
Confidence 456778999999998679999998 89999999999999999999999999999999775
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2e-08 Score=111.43 Aligned_cols=96 Identities=16% Similarity=0.240 Sum_probs=84.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...+.+.++.+|+++..+|..|.+.|
T Consensus 48 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i 127 (347)
T PRK04262 48 DEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLV 127 (347)
T ss_pred CcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998765544444556678888999755788999999999999999999999
Q ss_pred HcCCCCeEEEEeeecc
Q psy12877 479 SLGHQDVMVAGGMESM 494 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~ 494 (814)
++|.++.+|+++.|..
T Consensus 128 ~sg~~~~aLVv~~e~~ 143 (347)
T PRK04262 128 KSGMIKYALAIGADTA 143 (347)
T ss_pred HcCCCCEEEEEEEeee
Confidence 9999999999999974
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.9e-08 Score=109.41 Aligned_cols=97 Identities=18% Similarity=0.182 Sum_probs=85.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCC-CccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPK-STVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~-~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++. ..++++++.+|+|+..+|..|.+.
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~ 128 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYA 128 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999876554334567788888999974 368999999999999999999999
Q ss_pred HHcCCCCeEEEEeeeccc
Q psy12877 478 LSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s 495 (814)
|++|.++.||+++.|.++
T Consensus 129 l~~g~~~~~Lvv~~e~~s 146 (329)
T PRK07204 129 IECGRYKRVLIISSEISS 146 (329)
T ss_pred HHCCCCCEEEEEEecccc
Confidence 999999999999999875
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=98.76 E-value=9.2e-08 Score=105.30 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=50.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++ ..+++.++.+|++++.++..|..+|++|. +.+|+++.|.+|.
T Consensus 88 ~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~ 144 (326)
T PRK05963 88 LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSR 144 (326)
T ss_pred CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhc
Confidence 355678899999998 67999999999999999999999999985 8999999998653
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=98.69 E-value=7e-08 Score=108.87 Aligned_cols=52 Identities=25% Similarity=0.399 Sum_probs=47.1
Q ss_pred HHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc
Q psy12877 441 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494 (814)
Q Consensus 441 ~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~ 494 (814)
.+..++..+|+. .|.++++.+|+|++.||..|+++|++|++|+|||+|+|..
T Consensus 139 ~a~~ia~~lgl~--Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~ 190 (392)
T PRK09185 139 LADFLRAYLGLS--GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSL 190 (392)
T ss_pred HHHHHHHHhCCC--CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeecccc
Confidence 566788888984 5899999999999999999999999999999999999864
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.6e-08 Score=106.85 Aligned_cols=97 Identities=14% Similarity=0.203 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|++++|||.+++++..+....+..+..+...+|+++..+++.++.+|+++..++..|...|
T Consensus 57 ~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i 136 (353)
T PRK12880 57 NTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLI 136 (353)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999988766677889999999999867789999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|..+ +|+++.|..|.
T Consensus 137 ~~~~~~-~LVv~~e~~S~ 153 (353)
T PRK12880 137 QSGLGK-ILLICGDTLSK 153 (353)
T ss_pred HcCCCC-EEEEEehhhhc
Confidence 999999 99999998763
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.8e-08 Score=103.38 Aligned_cols=91 Identities=27% Similarity=0.473 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc-----eEEEEecccCC------------------------CCChHHHHHHHHcCCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ-----EVYMGNVCQAG------------------------LGQAPCRQAVIFAGLP 452 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID-----~vivG~~~~~~------------------------~~~~~a~~~a~~~Gl~ 452 (814)
...|+..++.+||+|+|+++.+++ ++++|+..... .....+..++...|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 456889999999999999885432 47778765410 011246678888898
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~ 494 (814)
+.|.++++++|+||+.||..|+++|++|++|++||||+|..
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~ 206 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAP 206 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--
T ss_pred -CCccccccccccccccccchhcccccccccccccccccccc
Confidence 47999999999999999999999999999999999999953
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.4e-07 Score=102.39 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=54.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
-+..+-+++..+|++.++.++.++ .+|+++..+|..|.+++++|....+||+++|.+|
T Consensus 223 ~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S 281 (521)
T PLN02854 223 TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT 281 (521)
T ss_pred CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee
Confidence 467899999999998899999999 8999999999999999999999999999999987
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.1e-07 Score=103.05 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=82.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEec-ccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNV-CQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~-~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
+.+..+|+.+|+++||+++|+++++||.+++.+. .+....+..+..++..+|++ ..+.+.++.+|+++..+|..|.+.
T Consensus 50 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~~~ 128 (339)
T PRK06840 50 EDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAKDL 128 (339)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHHHH
Confidence 4788999999999999999999999999986533 22222344567788899997 568899999999999999999999
Q ss_pred HHc-CCCCeEEEEeeecccc
Q psy12877 478 LSL-GHQDVMVAGGMESMSN 496 (814)
Q Consensus 478 I~s-G~~dvvLa~G~Es~s~ 496 (814)
|++ |.++.+|+++.|..+.
T Consensus 129 l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 129 LYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred HhcCCCccEEEEEeeccccc
Confidence 999 9999999999988653
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=99.87 Aligned_cols=85 Identities=25% Similarity=0.364 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
++...+|+.+|++.||+++||+++|||.+++|.... ...++..++..+|+| .+.+.++|+|+..++..|+..|
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~n---Q~ipssfvar~LGIP----~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMN---QITPTSFAARTLGIP----YLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC---CcCcHHHHHHHhCCC----ccceeecCHHHHHHHHHHHHHH
Confidence 455668999999999999999999999999998762 223445677788865 5899999999999999999999
Q ss_pred HcCCCCeEEEEe
Q psy12877 479 SLGHQDVMVAGG 490 (814)
Q Consensus 479 ~sG~~dvvLa~G 490 (814)
++|.+|+||++-
T Consensus 124 aSG~Ad~VLavt 135 (334)
T PRK12404 124 NSGGAKYVLTGA 135 (334)
T ss_pred HcCCCCEEEEEe
Confidence 999999999873
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.9e-07 Score=101.36 Aligned_cols=95 Identities=17% Similarity=0.179 Sum_probs=84.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..+++.++.+|+++..+|..|.+.|
T Consensus 49 ~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~~l 127 (326)
T PRK05963 49 DETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADGFV 127 (326)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHHHH
Confidence 578899999999999999999999999999998766544566778899999997 4689999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|. +.+|+++.|..+
T Consensus 128 ~~~~-~~aLVv~~d~~s 143 (326)
T PRK05963 128 RAQG-KPVLVVAANILS 143 (326)
T ss_pred HcCC-CeEEEEEechhh
Confidence 9985 899999999865
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.8e-07 Score=108.48 Aligned_cols=190 Identities=16% Similarity=0.200 Sum_probs=127.7
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCccccccccc
Q psy12877 23 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 102 (814)
Q Consensus 23 l~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (814)
++...|++.++++|+|++.|+.+|.+.|++|+||.+||+|+.-.-. |.
T Consensus 157 FDfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk-Pt------------------------------- 204 (2376)
T KOG1202|consen 157 FDFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK-PT------------------------------- 204 (2376)
T ss_pred EeccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEec-cc-------------------------------
Confidence 3347999999999999999999999999999999999999865332 10
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHhhhcCCcee
Q psy12877 103 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 182 (814)
Q Consensus 103 ~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~ 182 (814)
+.+.- .| -|+ +.+|-..| .|
T Consensus 205 ~slQF----------------------lR------Lgm-------------------ls~dGsCk-------------aF 224 (2376)
T KOG1202|consen 205 TSLQF----------------------LR------LGM-------------------LSPDGSCK-------------AF 224 (2376)
T ss_pred hhhHH----------------------HH------hcC-------------------cCCCCccc-------------ch
Confidence 00000 00 011 11111111 12
Q ss_pred ccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC----CCc--HHHHHHHHHHHcCCCCC
Q psy12877 183 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF----PIA--PAFAIPTLLKNGGVAKQ 256 (814)
Q Consensus 183 ~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~----~~~--~~~a~~~al~~aGl~~~ 256 (814)
+ ..+|.-..+||-++++|.+.+.|++. +|.|+......+..... +.+ -..-++..|+.+|+.|+
T Consensus 225 D------eagnGY~Rseg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~ 294 (2376)
T KOG1202|consen 225 D------EAGNGYCRSEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPE 294 (2376)
T ss_pred h------ccCCceeecCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcc
Confidence 1 12333345699999999999999876 56666666655533222 222 24578899999999999
Q ss_pred CccEEecCCCchH----HHHHHhhhcCCCCC---CcccCCCCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 257 DVALWEINEAFSV----VVLANIKKLDIDPS---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 257 DID~~e~~d~fa~----~~l~~~e~lg~~~~---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
++-|+|.|..-+. |+.-.+-.+ ||.. |+-...-+..+||+-=|||.-.++..+..|.+
T Consensus 295 sv~YvEAHGtGTkVGDpQEaN~it~~-fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~ 359 (2376)
T KOG1202|consen 295 SVVYVEAHGTGTKVGDPQEANGITRF-FCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEE 359 (2376)
T ss_pred cEEEEEeccCCCCCCChHHhhhHHHH-HhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHh
Confidence 9999999977653 333333222 4544 44343334458999999999999999999985
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.6e-07 Score=102.52 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=95.5
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
+.++.|.|++.+..... +.+..+|+.+|+++||+++ ++++||.+++++..+.......+..+...+|++...+++
T Consensus 29 ~~~~~g~G~~~~~~~~~---~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~ 103 (379)
T TIGR01835 29 EKFHIGIGQKKMAVPPI---DEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSF 103 (379)
T ss_pred HHHHhhcCceEEeeCCC---CCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEE
Confidence 45667888877765432 4678999999999999998 899999999998766544456888899999997667899
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
.+..+|++|..|+..|.+.|++|..+.+|+++.|...
T Consensus 104 dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~ 140 (379)
T TIGR01835 104 ELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAK 140 (379)
T ss_pred EeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhh
Confidence 9999999999999999999999999999999999754
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.6e-07 Score=98.40 Aligned_cols=53 Identities=13% Similarity=0.200 Sum_probs=48.6
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++..++..+|+ |.+.++.+|+|++.++..|+++|++|.+|.|||+++|.+|.
T Consensus 85 ~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~ 137 (327)
T TIGR02845 85 ITANFVARDLGI----PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYAT 137 (327)
T ss_pred cHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccch
Confidence 477788888886 77999999999999999999999999999999999998775
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.9e-07 Score=102.88 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..+...+|+++..+.+.++ .+|+++..+|..|.+.|+
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~ 162 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLE 162 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999988654 34566778899999998667889998 899999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|..+.||++++|.++.
T Consensus 163 ~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 163 ANPGARVLVVSTELCSL 179 (361)
T ss_pred HCCCCEEEEEEeecccc
Confidence 99999999999998874
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=8.5e-07 Score=99.81 Aligned_cols=191 Identities=13% Similarity=0.111 Sum_probs=124.7
Q ss_pred CChHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~-p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
-+..+.+++..+|++..+ .++.++.+|+++..+|..|...|++|....||+++.|..|.....
T Consensus 141 ~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~---------------- 204 (391)
T PLN03169 141 LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGFRP---------------- 204 (391)
T ss_pred CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhccC----------------
Confidence 356788999999998655 478999999999999999999999999999999999996541100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.
T Consensus 205 ---------~---------------------------------------------------------------------- 205 (391)
T PLN03169 205 ---------P---------------------------------------------------------------------- 205 (391)
T ss_pred ---------C----------------------------------------------------------------------
Confidence 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC---C--------CCCC-
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT---E--------PIDF- 236 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~---~--------p~~~- 236 (814)
+.+ .+-....++.++|||+|+||...+... ..++...+...+.... + +..+
T Consensus 206 --~~~-------------~~~d~~~~~lFGDGAaA~vl~~~~~~~--~~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~ 268 (391)
T PLN03169 206 --SPD-------------RPYDLVGAALFGDGAAAVIIGADPIPV--SESPFFELHTAIQQFLPGTEKTIDGRLTEEGIN 268 (391)
T ss_pred --Ccc-------------chhhhhhhhhccCceEEEEEecCCCcc--cCCcceEEEeeeeeEcCCCccccCceecCCceE
Confidence 000 000011234578999999998643210 0112223333222100 0 0000
Q ss_pred -CCc----------HHHHHHHHHHHcCCCCCCcc--EEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHH
Q psy12877 237 -PIA----------PAFAIPTLLKNGGVAKQDVA--LWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 237 -~~~----------~~~a~~~al~~aGl~~~DID--~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~ 303 (814)
..+ ....++++|+++|++++||| +|-+|-+.....-...+.||++++++-.+= ...+-+|++++
T Consensus 269 ~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~---~~l~~~GNtsS 345 (391)
T PLN03169 269 FKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSR---RALMDYGNVSS 345 (391)
T ss_pred EEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHH---HHHHHhCCchH
Confidence 001 12467889999999999999 899999998777788899999988653100 01245667777
Q ss_pred HHHHHHHHHHHc
Q psy12877 304 RIVIHLCHALKS 315 (814)
Q Consensus 304 ~~l~e~v~qLr~ 315 (814)
..+.-++.++++
T Consensus 346 asip~~L~~~~~ 357 (391)
T PLN03169 346 NTIVYVLEYMRE 357 (391)
T ss_pred hHHHHHHHHHHH
Confidence 776666666664
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=5e-07 Score=101.41 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc-cEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~-~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
...+|+.+|+++||+++|++++|||.+++++..+.. -+..+..++..+|+++.. .++.++.+|+++..+|..|...|+
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~ 178 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN-MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE 178 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC-CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence 356799999999999999999999999999876633 567888999999997543 479999999999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|....||++++|.+|.
T Consensus 179 ~~~~~~VLVV~~E~~S~ 195 (389)
T PLN03168 179 NNKGARVLAVASEVTAV 195 (389)
T ss_pred hCCCCEEEEEEEehhhh
Confidence 99999999999999874
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.5e-06 Score=97.60 Aligned_cols=190 Identities=14% Similarity=0.144 Sum_probs=128.1
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
-+..+-+++..+|++..+. .+.++.+|+++..+|..|...+++|....||++++|.+|..-.
T Consensus 137 ~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------------- 199 (393)
T PLN03172 137 MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFR----------------- 199 (393)
T ss_pred CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhc-----------------
Confidence 4668889999999986664 4688999999999999999999999999999999999773100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
++++ +
T Consensus 200 ------------------------------------------------------------------------~~~d--~- 204 (393)
T PLN03172 200 ------------------------------------------------------------------------GPSD--T- 204 (393)
T ss_pred ------------------------------------------------------------------------cccc--c-
Confidence 0000 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEec---CCC------CCCCC-
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA---TEP------IDFPI- 238 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~---~~p------~~~~~- 238 (814)
+.+. .-.++.++|||+|+||...+... ..+|.-+|.+..... .+. ...+.
T Consensus 205 --~~~~----------------~v~~~LFGDGAaAvVl~~~~~~~--~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~ 264 (393)
T PLN03172 205 --HLDS----------------LVGQALFGDGAAAVIIGADPDTK--IERPLFEIVSAAQTILPDSDGAIDGHLREVGLT 264 (393)
T ss_pred --cHHh----------------hhccchhcCceEEEEEecCCCCc--ccCceeEEeeeccEEecCCcccccceEEcCCcE
Confidence 0000 01234578999999998643211 012333566554211 000 00110
Q ss_pred -------------cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHH
Q psy12877 239 -------------APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARI 305 (814)
Q Consensus 239 -------------~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~ 305 (814)
.....+++.|+++|++..|||+|-+|-......-...+.||++++++-.+= ..-+-+|++++..
T Consensus 265 ~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~---~vl~~yGNtSSaS 341 (393)
T PLN03172 265 FHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATR---HVLSDYGNMSSAC 341 (393)
T ss_pred EEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHH---HHHHHhCccHHhH
Confidence 012467788999999999999999999998888889999999988653210 0124556777777
Q ss_pred HHHHHHHHH
Q psy12877 306 VIHLCHALK 314 (814)
Q Consensus 306 l~e~v~qLr 314 (814)
+.-++.+++
T Consensus 342 v~~vL~~~~ 350 (393)
T PLN03172 342 VLFILDEMR 350 (393)
T ss_pred HHHHHHHHH
Confidence 777777765
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.47 E-value=7e-07 Score=101.47 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~ 479 (814)
...+|+..|+++||+++|++|+|||.+|+.+..+. .-+..+.++...+|++.....+.++ .+|++|..+|..|.+.|+
T Consensus 147 ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 147 ETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 35689999999999999999999999999887664 4667889999999998678899999 899999999999999999
Q ss_pred cCCCCeEEEEeeeccccC
Q psy12877 480 LGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~~ 497 (814)
+|....||++++|.+|..
T Consensus 226 ~~~~~~aLVVstE~~S~~ 243 (478)
T PLN02932 226 VHRNTYALVVSTENITQN 243 (478)
T ss_pred cCCCCeEEEEEEeecccc
Confidence 999999999999998854
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.1e-07 Score=94.03 Aligned_cols=54 Identities=30% Similarity=0.508 Sum_probs=48.6
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeecc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~ 65 (814)
...++.+++..+|+ ..|.++++.+|+||+.||..|+++|++|++|+|||||+|.
T Consensus 152 ~~~~a~~ia~~~gl--~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~ 205 (254)
T PF00109_consen 152 PNSAAGRIAILFGL--RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDA 205 (254)
T ss_dssp TTHHHHHHHHHHTB---SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE-
T ss_pred ccccccchhhhcCC--CCccccccccccccccccchhccccccccccccccccccc
Confidence 34588999999999 6999999999999999999999999999999999999995
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.8e-07 Score=99.82 Aligned_cols=190 Identities=12% Similarity=0.151 Sum_probs=126.7
Q ss_pred CChHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~-p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+.++-+++..+|++..+ .++.++.+|+++..+|..|.+.+++|....||++++|..|..-.
T Consensus 141 ~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~----------------- 203 (401)
T PLN03170 141 MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFR----------------- 203 (401)
T ss_pred CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhccC-----------------
Confidence 567899999999998555 47899999999999999999999999999999999999774110
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
++ ++ .
T Consensus 204 -------~~-----------------------------------------------------------------~~-~-- 208 (401)
T PLN03170 204 -------GP-----------------------------------------------------------------SE-S-- 208 (401)
T ss_pred -------Cc-----------------------------------------------------------------cc-c--
Confidence 00 00 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC----C--CC---CCC--
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----E--PI---DFP-- 237 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~----~--p~---~~~-- 237 (814)
..+ . ...++.++|||+|+||...+... ...+..++.+.+.... + +. ..+
T Consensus 209 --~~~-------------~---~~~~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~ 268 (401)
T PLN03170 209 --HLD-------------S---MVGQALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLT 268 (401)
T ss_pred --hhh-------------h---hhhhhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeE
Confidence 000 0 01234578999999998643211 1123224544332100 0 00 001
Q ss_pred --Cc---H-------HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHH
Q psy12877 238 --IA---P-------AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARI 305 (814)
Q Consensus 238 --~~---~-------~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~ 305 (814)
.. + ...++++|+++|++.+|||.|-+|-......-...+.||++++++-.+ .....-+|++++..
T Consensus 269 ~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s---~~~l~~~GNtsSas 345 (401)
T PLN03170 269 FHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRAT---RHVLSEYGNMSSAC 345 (401)
T ss_pred EEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHHHHHH---HHHHHHhCccHHhH
Confidence 00 1 237788999999999999999999998887778899999998875210 01234556667767
Q ss_pred HHHHHHHHH
Q psy12877 306 VIHLCHALK 314 (814)
Q Consensus 306 l~e~v~qLr 314 (814)
+.-++.+++
T Consensus 346 v~~vL~~~~ 354 (401)
T PLN03170 346 VLFILDEMR 354 (401)
T ss_pred HHHHHHHHH
Confidence 777777765
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-06 Score=99.95 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~ 479 (814)
...+|+..|+++||+++|++|+|||.+++ ++.+...-+..+.+++..+|++.....+.++ .+|++|..+|..|.+.|+
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~ 249 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQ 249 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999987 5544444677899999999998778899999 699999999999999999
Q ss_pred cCCCCeEEEEeeeccccC
Q psy12877 480 LGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~~ 497 (814)
+|....||++++|.+|..
T Consensus 250 ~~~~~~aLVVstE~~S~~ 267 (502)
T PLN02377 250 VHRNTYAVVVSTENITQN 267 (502)
T ss_pred cCCCCEEEEEEEeccccc
Confidence 999999999999998754
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.5e-06 Score=97.92 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc-cEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~-~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++.. ....+..+..++..+|++... .++.++.+|+++..+|..|...|
T Consensus 104 e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~ 182 (391)
T PLN03169 104 EAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIA 182 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999988763 334566788899999997544 46899999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|....||++++|..+
T Consensus 183 ~~~~~~~vLvv~~e~~s 199 (391)
T PLN03169 183 ENNPGSRVLLTTSETTI 199 (391)
T ss_pred HhCCCCeEEEEEEEcCh
Confidence 99999999999999865
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.4e-06 Score=93.36 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=55.4
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.|..+-+++..+|++.++.++.++ .+|++++.+|..|.+++++|....|||+++|.+|.
T Consensus 207 ~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 207 TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQ 266 (502)
T ss_pred CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecccc
Confidence 467899999999998889999999 79999999999999999999999999999999875
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.1e-06 Score=92.69 Aligned_cols=189 Identities=15% Similarity=0.175 Sum_probs=126.4
Q ss_pred CChHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~-p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
-+..+-+++..+|++..+ ..+.++.+|+++..+|..|.+.+++|....|||+++|.+|..-.
T Consensus 137 ~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------------- 199 (391)
T PLN03173 137 MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFR----------------- 199 (391)
T ss_pred ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhhC-----------------
Confidence 366888999999998655 35678999999999999999999999999999999999773100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
++++ +
T Consensus 200 ------------------------------------------------------------------------~~~d--~- 204 (391)
T PLN03173 200 ------------------------------------------------------------------------GPSD--T- 204 (391)
T ss_pred ------------------------------------------------------------------------Cccc--c-
Confidence 0000 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC-CccEEEEEEEEe----cCC-------CCC-
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDA----ATE-------PID- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~-~p~a~I~g~~~~----~~~-------p~~- 235 (814)
+.+. .-.++.++|||+|+||...+. .+. +|.-++.+.... +++ ...
T Consensus 205 --~~~~----------------~v~~~LFGDGAaAvvl~~~~~---~~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~ 263 (391)
T PLN03173 205 --HLDS----------------LVGQALFGDGAAAIIIGSDPV---LGVEKPLFELVSAAQTILPDSDGAIDGHLREVGL 263 (391)
T ss_pred --chhh----------------hhhhhhhcCceEEEEEeCCCC---CCcCCcceEEEeeeeEEecCCccceeeEEEcCce
Confidence 0000 012345789999999986432 121 232244443321 000 000
Q ss_pred -C---CC-------cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHH
Q psy12877 236 -F---PI-------APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGAR 304 (814)
Q Consensus 236 -~---~~-------~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~ 304 (814)
+ .. .....++++|+++|++.+|||+|-+|-......-...+.||+.++++-.+= ..-+-+|++++.
T Consensus 264 ~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~---~vl~~yGNtSSa 340 (391)
T PLN03173 264 TFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRATR---HVLSEYGNMSSA 340 (391)
T ss_pred EEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHHHHHHHcCCChHHHHHHH---HHHHHhCcchhh
Confidence 0 00 113477889999999999999999999999888889999999988653210 012445667777
Q ss_pred HHHHHHHHHH
Q psy12877 305 IVIHLCHALK 314 (814)
Q Consensus 305 ~l~e~v~qLr 314 (814)
.+.-++.+++
T Consensus 341 Sv~~vL~~~~ 350 (391)
T PLN03173 341 CVLFILDEMR 350 (391)
T ss_pred HHHHHHHHHH
Confidence 7776766666
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.1e-06 Score=96.42 Aligned_cols=93 Identities=18% Similarity=0.123 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc-cEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~-~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
..+|+.+|+++||+++|+++++||.+++++..+. .-+..+..++..+|+++.. ..+.++.+|+++..+|..|.+.+++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~-~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~ 180 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-cCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999988877543 2566888899999998654 3467899999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|....||++++|.+|
T Consensus 181 ~~~~~vLVV~~E~~S 195 (393)
T PLN03172 181 NAGSRVLVVCSEITA 195 (393)
T ss_pred CCCCeEEEEEEehhh
Confidence 999999999999987
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.2e-06 Score=97.27 Aligned_cols=112 Identities=10% Similarity=0.057 Sum_probs=89.2
Q ss_pred EeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHH---HHcCCCCCccEE
Q psy12877 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAV---IFAGLPKSTVCT 458 (814)
Q Consensus 382 IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a---~~~Gl~~~~~~~ 458 (814)
.+|.++..+.-. -.+.+..+|++.|++.+|+++|+++++||.|++++..+....+..+..+. ..+|.+ ...++
T Consensus 36 ~~GI~~r~~ava---~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~af 111 (459)
T PLN02577 36 TIGLGQDCMAFC---TDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGV 111 (459)
T ss_pred hhccceeEeccC---CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEe
Confidence 346555443211 12578999999999999999999999999999998876544455555553 456775 57899
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCC--CeEEEEeeeccccC
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMSNV 497 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~--dvvLa~G~Es~s~~ 497 (814)
.++.+|.++..||..|.+.|++|.. +.|||+|.|..+..
T Consensus 112 Di~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~ 152 (459)
T PLN02577 112 DSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYA 152 (459)
T ss_pred ehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhcc
Confidence 9999999999999999999999985 99999999986644
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.4e-06 Score=97.56 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~s 480 (814)
..++...|+++||+++|++|+|||.+++.+. .....+..+.++...+|++.....+.++ .+|++|..+|..|.+.+++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 4578899999999999999999999988754 4344677899999999998678899999 6999999999999999999
Q ss_pred CCCCeEEEEeeecccc
Q psy12877 481 GHQDVMVAGGMESMSN 496 (814)
Q Consensus 481 G~~dvvLa~G~Es~s~ 496 (814)
+....+|++++|.+|.
T Consensus 255 ~~~~~aLVVstE~~S~ 270 (511)
T PLN02192 255 HPNSYALVISMENITL 270 (511)
T ss_pred CCCCeEEEEEEEeccc
Confidence 9999999999999883
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=5e-06 Score=93.45 Aligned_cols=190 Identities=12% Similarity=0.113 Sum_probs=124.9
Q ss_pred CChHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~-p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
-+..+-+++..+|++..+ .++.++.+|+++..++..|...|++|....||++++|.+|.... .
T Consensus 136 ~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~--~-------------- 199 (389)
T PLN03168 136 MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVTYR--A-------------- 199 (389)
T ss_pred CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhhcc--C--------------
Confidence 467889999999998554 48999999999999999999999999999999999999775110 0
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+++
T Consensus 200 -------------------------------------------------------------------------~~~---- 202 (389)
T PLN03168 200 -------------------------------------------------------------------------PSE---- 202 (389)
T ss_pred -------------------------------------------------------------------------ccc----
Confidence 000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEe----cC-----CCCCCC--
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA----AT-----EPIDFP-- 237 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~----~~-----~p~~~~-- 237 (814)
.+.+ +.-.++.++|||+|+||...+... . .++...+...... +. +....+
T Consensus 203 -~~~~----------------~~~~~~LFGDGAaAvvl~~~~~~~-~-~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~ 263 (389)
T PLN03168 203 -NHLD----------------GLVGSALFGDGAGVYVVGSDPKPE-V-EKALFEVHWAGETILPESDGAIDGHLTEAGLI 263 (389)
T ss_pred -ccHH----------------HHhccccccCccEEEEEecCCCCc-c-CCcceEEEeeeeEEEcCCCCccCceEecCceE
Confidence 0000 011345678999999998643211 0 1232234433221 00 000000
Q ss_pred ---C--cH-------HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHH
Q psy12877 238 ---I--AP-------AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARI 305 (814)
Q Consensus 238 ---~--~~-------~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~ 305 (814)
. .+ ...++++|+..|+...|+|.|-+|-......-...+.||++++++-.+=. .-+-+|++++..
T Consensus 264 ~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~---vl~~yGNtSSaS 340 (389)
T PLN03168 264 FHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRD---ILSEFGNMSSAS 340 (389)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHH---HHHHhCccHhhh
Confidence 0 01 23556677888988888999999999998888899999999987632111 124456667666
Q ss_pred HHHHHHHHH
Q psy12877 306 VIHLCHALK 314 (814)
Q Consensus 306 l~e~v~qLr 314 (814)
+.-++.+++
T Consensus 341 v~~vL~~~~ 349 (389)
T PLN03168 341 VLFVLDQIR 349 (389)
T ss_pred HHHHHHHHH
Confidence 666666666
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-06 Score=96.46 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc-cEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~-~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
..+|+.+|+++||+++|++++|||.+++.++.+.. -+..+..++..+|++... ..+.++.+|+++..+|..|.+.|++
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~ 180 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999888775432 466788899999998544 3567899999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|....||++++|.+|
T Consensus 181 ~~~~~vLVV~~E~~S 195 (391)
T PLN03173 181 NKGARVLVVCSEITA 195 (391)
T ss_pred CCCCeEEEEEEehhh
Confidence 999999999999877
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.7e-06 Score=95.97 Aligned_cols=95 Identities=18% Similarity=0.089 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc-cEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~-~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.+++++..+.. -+..+..++..+|++... ....+..+|+++..+|..|.+.|+
T Consensus 107 ~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~ 185 (399)
T PLN03171 107 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAE 185 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHH
Confidence 677999999999999999999999999998877654 466788899999997543 245666799999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|....||++++|.+|.
T Consensus 186 ~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 186 NNRGARVLVVAAEITLL 202 (399)
T ss_pred hCCCCeEEEEEEecccc
Confidence 99999999999999764
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-06 Score=96.94 Aligned_cols=93 Identities=17% Similarity=0.125 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc-cEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~-~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
..+|+.+|+++||+++|++++|||.+++.++.+. ..+..+..++..+|+++.. .++.++.+|+++..+|..|.+.|++
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHc
Confidence 4569999999999999999999999988876442 3566888999999998543 3789999999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|....||++++|..|
T Consensus 185 ~~~~~vLVV~~E~~S 199 (401)
T PLN03170 185 NRGARVLVVCSEITA 199 (401)
T ss_pred CCCCeEEEEEEehhh
Confidence 999999999999987
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.8e-06 Score=95.81 Aligned_cols=59 Identities=17% Similarity=0.026 Sum_probs=51.1
Q ss_pred CChHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKST-VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~-p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
-+..+.+++..+|++..+ ..+.+..+|+++..+|..|...|++|....||+++.|.+|.
T Consensus 143 ~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 143 IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLL 202 (399)
T ss_pred CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccc
Confidence 366888999999998554 25567779999999999999999999999999999999775
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.4e-06 Score=90.19 Aligned_cols=54 Identities=17% Similarity=0.220 Sum_probs=48.3
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCC
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 69 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~ 69 (814)
..+..++..+|+ |.+.++.+|+|+..++.+|+.+|++|.+|.|||+++|.+|..
T Consensus 91 ~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~a 144 (337)
T PRK08304 91 ISANFAARELGI----PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATA 144 (337)
T ss_pred chHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhh
Confidence 456677777775 899999999999999999999999999999999999988764
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.2e-06 Score=93.47 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~s 480 (814)
.+.+...++.++|+++|++|+|||.+|+.+. +...-+..+.++...+|++.....+.++ .+|++|..+|..|.+.|++
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~cS-~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~ 266 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVNCS-LFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA 266 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence 3456677999999999999999999998533 4334677899999999998778899998 8999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|....+|++++|.+|
T Consensus 267 ~~~~~aLVVstE~~S 281 (521)
T PLN02854 267 NPNSYAVVVSTENIT 281 (521)
T ss_pred CCCCeEEEEEEeeee
Confidence 999999999999987
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.4e-05 Score=87.87 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=51.5
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeecc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~ 65 (814)
+..+-.++..+|++..++++.+..+|+++..|+..|...|++|..+.+||++.|.
T Consensus 84 ~s~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~ 138 (379)
T TIGR01835 84 KAAAVYVHGLLGLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI 138 (379)
T ss_pred CCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence 5688899999999867999999999999999999999999999999999999887
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.14 E-value=9.7e-06 Score=91.95 Aligned_cols=108 Identities=11% Similarity=0.106 Sum_probs=86.3
Q ss_pred EeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHH---cCCCCCccEE
Q psy12877 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIF---AGLPKSTVCT 458 (814)
Q Consensus 382 IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~---~Gl~~~~~~~ 458 (814)
.+|.++..+.-. ..+.+..+|+..|++.+|+++++++++||.|++|+..+....+..+..+... +|.+ ...++
T Consensus 33 ~~GI~~rr~av~---~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~f 108 (454)
T TIGR01833 33 TIGLGQTKMGFC---TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGI 108 (454)
T ss_pred eechhheecccC---CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEE
Confidence 356555543111 1257899999999999999999999999999999876655455556655553 4555 57899
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCC--CeEEEEeeec
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMES 493 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~--dvvLa~G~Es 493 (814)
.++.+|.++..||..|.+.|++|.. +.+||++.|.
T Consensus 109 Di~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 109 DTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred eccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 9999999999999999999999974 9999999998
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=87.63 Aligned_cols=101 Identities=19% Similarity=0.214 Sum_probs=88.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+...|+++|++.+|.++++++++|+.|++|+-......-..+..+...+|+++...++.+..+|-+|..||+.|...|
T Consensus 48 ~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v 127 (377)
T COG3425 48 DEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWV 127 (377)
T ss_pred chhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHH
Confidence 56888999999999999999999999999999865443344578888999999988889999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccccCcc
Q psy12877 479 SLGHQDVMVAGGMESMSNVPF 499 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~~p~ 499 (814)
.+|..+.+||+|.+.-...|.
T Consensus 128 ~s~~~~~~LvI~sD~a~~~~~ 148 (377)
T COG3425 128 ESGMISYGLVIGADTAQYAPG 148 (377)
T ss_pred HcCCccceEEEeehhhccCCC
Confidence 999999999999987554443
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.1e-05 Score=89.53 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=55.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
-|..+-+++..+|++.++.++.++ .+|++++.+|..|.+++++|....|||+++|.+|.
T Consensus 183 ~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 183 TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQ 242 (478)
T ss_pred CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeeccc
Confidence 467899999999998789999999 99999999999999999999999999999999886
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.3e-05 Score=87.50 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=54.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
.+..+..++..+|+..+++++.++ ++|++++.+|..|.++++++....+||+++|.+|
T Consensus 211 ~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S 269 (511)
T PLN02192 211 TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT 269 (511)
T ss_pred CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc
Confidence 467899999999998789999999 7999999999999999999999999999999988
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.6e-05 Score=86.79 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=81.4
Q ss_pred CCHHHHHHH-HHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCC-CCCcHHHHHHHHHHH
Q psy12877 400 LSATKLGAV-AIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNK-VCASGMKAIMLASQT 477 (814)
Q Consensus 400 ~~~~eLa~~-A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~-~caSg~~Ai~~Aa~~ 477 (814)
....+|+.. |++++|+++|++|+|||.+++. +.+....+..+..+...+|++.....+.++. +|++|..+|..|.+.
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~l 209 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHH
Confidence 445566665 8888999999999999998764 3333335677888999999987888999997 999999999999999
Q ss_pred HHcCCCCeEEEEeeeccccC
Q psy12877 478 LSLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~~ 497 (814)
++++....+|++++|.+|..
T Consensus 210 l~a~~~~~aLVVs~E~~S~~ 229 (466)
T PLN00415 210 LKANPNTYAVIVSTENMTLS 229 (466)
T ss_pred HHhCCCCEEEEEEEeccccc
Confidence 99999999999999998743
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.1e-05 Score=73.29 Aligned_cols=96 Identities=21% Similarity=0.153 Sum_probs=62.7
Q ss_pred cEEEEEEEEecCC-CCCCC-----CcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCC--CCcc
Q psy12877 220 LARIIAYFDAATE-PIDFP-----IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDP--SKVN 286 (814)
Q Consensus 220 ~a~I~g~~~~~~~-p~~~~-----~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~--~~vN 286 (814)
+++|+|++...+. ..... .+...+++++|+++|++++|||++|.|..-+.. +...+ +.|+-.. .++-
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 4789999998764 22222 244689999999999999999999999887753 22222 2333322 2455
Q ss_pred cCCCCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 287 VHGGAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 287 ~~GG~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
+..=+-.+||..+++|+..++.++.+|+.
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~ 109 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEH 109 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHH
T ss_pred eeccccccccccccchHHHHHHHHHHHhc
Confidence 55555568999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00019 Score=78.13 Aligned_cols=175 Identities=17% Similarity=0.082 Sum_probs=122.8
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+-.++..+|+++..-++.+..+|-+|..+|++|...|.+|..+-+||.|.+..-..|..
T Consensus 90 ~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~~-------------------- 149 (377)
T COG3425 90 TATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGD-------------------- 149 (377)
T ss_pred hHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCCCc--------------------
Confidence 677899999999999999999999999999999999999999999999998873221100
Q ss_pred CcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCH
Q psy12877 93 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF 172 (814)
Q Consensus 93 ~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~ 172 (814)
.
T Consensus 150 ------------------------------------------------------------------------------~- 150 (377)
T COG3425 150 ------------------------------------------------------------------------------A- 150 (377)
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred HhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC------------C---
Q psy12877 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------------P--- 237 (814)
Q Consensus 173 e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~------------~--- 237 (814)
. .| ..++||+|+||... -..++.+.+.++...|-.++ +
T Consensus 151 -----~--------E~-------t~GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s 203 (377)
T COG3425 151 -----L--------EY-------TAGAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFS 203 (377)
T ss_pred -----c--------Cc-------cCCCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceec
Confidence 0 01 13589999999752 12334554555543321111 0
Q ss_pred -----CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCc-cccCCCCChHHHHHHHHHH
Q psy12877 238 -----IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAV-SLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 238 -----~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~l-a~Ghp~gasG~~~l~e~v~ 311 (814)
.....|.+..+++.|++++|+|++-+|-+|+-...-.++.+++.++++-++==.. ..|+.+.+|....++.++.
T Consensus 204 ~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 204 EPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence 1114588889999999999999999999999999999999999865433311011 2577666665544444444
Q ss_pred HH
Q psy12877 312 AL 313 (814)
Q Consensus 312 qL 313 (814)
+-
T Consensus 284 ~a 285 (377)
T COG3425 284 NA 285 (377)
T ss_pred hc
Confidence 43
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00041 Score=74.08 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=41.8
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEee
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGM 63 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~ 63 (814)
.++-.++..+| +|.+.+..+|+|+..++..|+.+|++|.+|+|||+-+
T Consensus 89 ipssfvar~LG----IP~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavts 136 (334)
T PRK12404 89 TPTSFAARTLG----IPYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGAS 136 (334)
T ss_pred CcHHHHHHHhC----CCccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 35557778888 4679999999999999999999999999999999633
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00036 Score=73.76 Aligned_cols=95 Identities=17% Similarity=0.142 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~s 480 (814)
.+.++..++.++|+++|++|+|||.+++.+... ..-+.++.++....|+...+..+.+. .||+.|..+|..|.+.++.
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 345778899999999999999999999877653 34567899999999998777666655 4699999999999999999
Q ss_pred CCCCeEEEEeeeccccC
Q psy12877 481 GHQDVMVAGGMESMSNV 497 (814)
Q Consensus 481 G~~dvvLa~G~Es~s~~ 497 (814)
---..+|++.+|..+..
T Consensus 162 ~p~~~ALVVstE~~s~~ 178 (290)
T PF08392_consen 162 HPNSYALVVSTENISAN 178 (290)
T ss_pred CCCcEEEEEEEeecccc
Confidence 99899999999998743
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00021 Score=69.96 Aligned_cols=109 Identities=13% Similarity=0.145 Sum_probs=80.9
Q ss_pred eceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCC--CCccEEEe
Q psy12877 383 VSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLP--KSTVCTTV 460 (814)
Q Consensus 383 vG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~--~~~~~~tv 460 (814)
+|.++..+.-.. .+.+...|++.|++.+|++.++++++|+.+++|+-...-..-..+..+...+|++ ...-.+.+
T Consensus 37 ~glgq~~~av~~---~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~ 113 (174)
T PF01154_consen 37 IGLGQEKMAVPP---PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEM 113 (174)
T ss_dssp TTT--SEEEE-----TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEE
T ss_pred hhcCeeEEEeCC---CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeeh
Confidence 355555443221 1468899999999999999999999999999997544333445788888889984 34567888
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCC--eEEEEeeecc
Q psy12877 461 NKVCASGMKAIMLASQTLSLGHQD--VMVAGGMESM 494 (814)
Q Consensus 461 ~~~caSg~~Ai~~Aa~~I~sG~~d--vvLa~G~Es~ 494 (814)
-.+|=+|..||..|+..|+++..| .+||++.|--
T Consensus 114 k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 114 KQACYGGTAALQNAVNWVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp ESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecccc
Confidence 999999999999999999999766 8999988764
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00082 Score=75.98 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=54.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecC-CCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNK-VCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~-~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+-.+...+|++.++..+.++. +|+++..+|..|.+.++++....+|++++|.+|.
T Consensus 169 ~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 169 NPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred CchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccc
Confidence 3668889999999998999999996 9999999999999999999999999999999775
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00084 Score=69.03 Aligned_cols=94 Identities=18% Similarity=0.143 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE-EeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT-TVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~-tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
...+|+.+|+++||+++|++++||+.+++.++.+. ..+.+-..+...+||++.+.-+ -...||..|..+|..|....+
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~ 177 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIAR 177 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHh
Confidence 34569999999999999999999999998887653 3455667788889998765433 345679999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+..-..||++.+|-.|
T Consensus 178 ~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 178 ANPGARVLVVCVELCS 193 (226)
T ss_dssp HSTT-EEEEEEEEEGG
T ss_pred CCccceEEEEEEEeeE
Confidence 9888999999999876
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00017 Score=85.95 Aligned_cols=90 Identities=20% Similarity=0.250 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCCCCC-------------------hHHHHHHHHcCCCCCccEEE
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAGLGQ-------------------APCRQAVIFAGLPKSTVCTT 459 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~~~~-------------------~~a~~~a~~~Gl~~~~~~~t 459 (814)
..|+.++..+|+-||||+|.+..+ +++|...+...+. +.+..++....+ ..|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~s 165 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCchh
Confidence 458999999999999999988765 6666554322110 122233333334 469999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~ 494 (814)
++++|+|.+.|+..|.+.|++|+||.+||.|+.-.
T Consensus 166 ~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~li 200 (2376)
T KOG1202|consen 166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLI 200 (2376)
T ss_pred hhhhhHHHHHHHHHHHHhhhccCCchhhhcccceE
Confidence 99999999999999999999999999999998543
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=68.20 Aligned_cols=200 Identities=17% Similarity=0.173 Sum_probs=127.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+.+-..++.++||+..+.-+.+ ..+|+.|..++..|....++.-...||++.+|--|-.-.
T Consensus 111 ~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~~----------------- 173 (356)
T COG3424 111 TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYV----------------- 173 (356)
T ss_pred CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeeee-----------------
Confidence 45677788999999877666654 579999999999999999999889999999998764210
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.++.
T Consensus 174 ----------------------------------------------------~~d~t----------------------- 178 (356)
T COG3424 174 ----------------------------------------------------FADDT----------------------- 178 (356)
T ss_pred ----------------------------------------------------cCCCC-----------------------
Confidence 00000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHc-CCCccEEEEEEEEecC--CCCCCC--------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKF-NAKPLARIIAYFDAAT--EPIDFP-------- 237 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~-g~~p~a~I~g~~~~~~--~p~~~~-------- 237 (814)
++ ..-..+.++||+||+|++-..+++.. ..+| .|.+..+.-- .-+.|+
T Consensus 179 --------~s-----------~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p--~i~~s~StL~~dse~~Mgwdv~d~G~ 237 (356)
T COG3424 179 --------KS-----------NLVGTALFGDGAAAVVVSGDRRAEGKRPLRP--DILDSFSTLYPDSEDIMGWDVGDQGL 237 (356)
T ss_pred --------cc-----------cceeeeeecCCeeEEEEeccccccccCCCCc--eecccccccCCccccccceeecCCcE
Confidence 00 01123457899999999985554332 2333 3444333210 001111
Q ss_pred -------------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCcc-ccCCCCChHH
Q psy12877 238 -------------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVS-LGHPIGMSGA 303 (814)
Q Consensus 238 -------------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la-~Ghp~gasG~ 303 (814)
..........|...|++.+||+.|-+|=.-.-..-...+.||+.++.+..+=-.|. +|+-..+|=+
T Consensus 238 ~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSatvL 317 (356)
T COG3424 238 KVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVL 317 (356)
T ss_pred EEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhH
Confidence 11145778899999999999999999988888888888999999873221111111 3443334433
Q ss_pred HHHHHHHHHHHc-CCCCCcc
Q psy12877 304 RIVIHLCHALKS-GQKGQLS 322 (814)
Q Consensus 304 ~~l~e~v~qLr~-g~~gl~~ 322 (814)
..+-+.+.+-.. +.+|+..
T Consensus 318 fVL~d~l~~~~~~g~~Gl~~ 337 (356)
T COG3424 318 FVLEDTLQKAPKSGSRGLMF 337 (356)
T ss_pred HHHHHHHHhcCCCCcceeee
Confidence 334344433333 7888877
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0009 Score=76.28 Aligned_cols=57 Identities=9% Similarity=-0.003 Sum_probs=47.5
Q ss_pred ChHHHHHH---HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCc--CEEEEEeeccCCC
Q psy12877 11 QAPCRQAV---IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMSN 68 (814)
Q Consensus 11 ~~~ar~~a---~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~--d~vLa~G~e~~s~ 68 (814)
+..+-.++ ..+|.+ .+.++.++.+|.++..|+..|...|++|.. +.|||+|+|.++.
T Consensus 90 ps~A~~v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 90 KSIKTFLMQLFEESGNT-DIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred CchHHHHHHHHHHhCCC-CcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhc
Confidence 44555554 456776 789999999999999999999999999985 9999999998543
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=97.16 E-value=8.6e-05 Score=69.10 Aligned_cols=45 Identities=33% Similarity=0.452 Sum_probs=38.0
Q ss_pred CCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 645 AKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 645 ~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
++|+++|++++..+.+|..|+.+|+.|++++|+++|+ .+|+|+.|
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~E 46 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIE 46 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEE
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhh
Confidence 4799999999999999999999999999999999998 68888887
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=65.95 Aligned_cols=93 Identities=19% Similarity=0.153 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I~s 480 (814)
...|.++|.++||+.+++.++|||.+++.++.+.. .+.+-..+...+|+++...-+.+ .-||+.|..++..|.+..++
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra 154 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRA 154 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhh
Confidence 45699999999999999999999999998876543 34454556677999865533333 34799999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
.-...||++.+|-.|
T Consensus 155 ~P~~~vlvV~vELCS 169 (356)
T COG3424 155 APDANVLVVCVELCS 169 (356)
T ss_pred CccceEEEEEeeeee
Confidence 999999999999876
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.025 Score=59.80 Aligned_cols=82 Identities=22% Similarity=0.329 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLG 481 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG 481 (814)
...|..+|+..||+++++.++|||.++.|-.+.+. ..+...+..+++ |.+-+-.+|++...+|..|+..|..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 44599999999999999999999999998664432 234455556677 57889999999999999999999999
Q ss_pred CCCeEEEEe
Q psy12877 482 HQDVMVAGG 490 (814)
Q Consensus 482 ~~dvvLa~G 490 (814)
.+|.||++-
T Consensus 124 ~a~~vla~t 132 (329)
T PF07451_consen 124 FADYVLAAT 132 (329)
T ss_dssp S-SEEEEEE
T ss_pred CcceEEEEe
Confidence 999999863
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.043 Score=62.66 Aligned_cols=54 Identities=9% Similarity=0.020 Sum_probs=44.9
Q ss_pred ChHHHHHHH---HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCc--CEEEEEeecc
Q psy12877 11 QAPCRQAVI---FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMES 65 (814)
Q Consensus 11 ~~~ar~~a~---~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~--d~vLa~G~e~ 65 (814)
+..+-.+.. .+|.+ .+.++.++.+|.++..||..|...|++|.. +.+||++.|.
T Consensus 87 ps~a~~v~~lL~~lG~~-~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 87 KSVKTVLMQLFEESGNT-DVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred CchHHHHHHHHHhcCCC-CceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 335555555 34565 789999999999999999999999999974 9999999988
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0022 Score=56.32 Aligned_cols=62 Identities=24% Similarity=0.332 Sum_probs=40.8
Q ss_pred HHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHH
Q psy12877 248 LKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr 314 (814)
|+++|++++|||++-.|.......-...+.+|++++++..+- --+||...++ ..+.+.+.++
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~--~~~Gn~~sa~---~~~~L~~~~~ 62 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNL--AEYGNTGSAS---IPINLADALE 62 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-TH--HHH-B-GGGH---HHHHHHHHHH
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHH--hccCcchhhh---HHHHHHHHHH
Confidence 789999999999999999998888888999999988664322 3478865555 3344444444
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.012 Score=50.59 Aligned_cols=39 Identities=21% Similarity=0.326 Sum_probs=34.9
Q ss_pred EEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 30 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 30 ~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
|.++.+|++.+.+|..|..+|++|.++.||+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 568899999999999999999999999999999999876
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.026 Score=48.46 Aligned_cols=39 Identities=21% Similarity=0.326 Sum_probs=34.5
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
+.++.+|++.+.+|..|...|++|.++.+|+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 468889999999999999999999999999999999874
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.2 Score=53.22 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEee
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGM 63 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~ 63 (814)
.+...+..++ +|.+-+-.+|++...++.+|+..|..|.+|.||++-+
T Consensus 87 ~s~f~ar~l~----iPf~GlygACST~~e~l~laa~~vdgg~a~~vla~tS 133 (329)
T PF07451_consen 87 SSSFAARDLG----IPFLGLYGACSTMMESLALAAMLVDGGFADYVLAATS 133 (329)
T ss_dssp HHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEE
T ss_pred HHHHHHHhcC----CCccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEec
Confidence 4445666665 4899999999999999999999999999999999744
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.22 Score=53.10 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=53.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.|.++.+++...||...+-.+.+ .+||++|+.+|.+|.+.++.---..+||+.+|..|.
T Consensus 118 tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 118 TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISA 177 (290)
T ss_pred CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeeccc
Confidence 46799999999999988988876 579999999999999999998888999999999875
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=86.52 E-value=0.9 Score=48.06 Aligned_cols=20 Identities=20% Similarity=0.614 Sum_probs=15.4
Q ss_pred cccccccccEEEeCCCCCCH
Q psy12877 732 PRELSAHYDLVVLDPPFLSD 751 (814)
Q Consensus 732 ~~~~~~~~d~~~~dppfl~~ 751 (814)
+..++++||+||.||||+..
T Consensus 147 ~~~~~~~fDlVv~NPPy~~~ 166 (251)
T TIGR03704 147 PTALRGRVDILAANAPYVPT 166 (251)
T ss_pred chhcCCCEeEEEECCCCCCc
Confidence 33345679999999999864
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=83.27 E-value=1.2 Score=38.82 Aligned_cols=73 Identities=14% Similarity=0.139 Sum_probs=44.2
Q ss_pred HHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe----CCCCCcHHHHHHHHHH--HHHcCCCCeEE
Q psy12877 414 IQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV----NKVCASGMKAIMLASQ--TLSLGHQDVMV 487 (814)
Q Consensus 414 L~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv----~~~caSg~~Ai~~Aa~--~I~sG~~dvvL 487 (814)
|+++|++++|||.++.-+. .....+.++..+|++......++ +.+|++-..++.++.. .|+. -|.++
T Consensus 1 L~~~g~~~~did~~i~hq~-----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~--Gd~vl 73 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA-----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKP--GDRVL 73 (90)
T ss_dssp HHHTT--GGGESEEEE-SS-----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCT--TEEEE
T ss_pred CccccCCHHHCCEEEeCCC-----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCC--CCEEE
Confidence 6899999999999887543 23455667888999855433332 3455666666666665 3444 46888
Q ss_pred EEeeec
Q psy12877 488 AGGMES 493 (814)
Q Consensus 488 a~G~Es 493 (814)
.+++..
T Consensus 74 ~~~~G~ 79 (90)
T PF08541_consen 74 LVGFGA 79 (90)
T ss_dssp EEEEET
T ss_pred EEEEEh
Confidence 777654
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 814 | ||||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-130 | ||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-114 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-129 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-113 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 1e-128 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 1e-112 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 8e-72 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 2e-65 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 2e-66 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 3e-58 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 3e-64 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 2e-54 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 1e-63 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 3e-57 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 1e-63 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 2e-57 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-63 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-57 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 4e-63 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 2e-57 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 8e-63 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 2e-56 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-62 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-57 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 1e-62 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 2e-56 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-62 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-57 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-62 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-57 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 2e-62 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 4e-56 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 2e-62 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 4e-56 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 4e-62 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 3e-57 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-61 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-56 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-61 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-56 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-61 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-56 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-60 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-57 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 5e-59 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-56 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 1e-57 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 2e-47 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 2e-53 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 5e-45 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 2e-46 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 2e-30 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 3e-46 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 3e-30 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 1e-43 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 1e-29 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 6e-42 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 1e-27 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 6e-42 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 5e-30 | ||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 6e-42 | ||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 3e-30 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 1e-37 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 4e-24 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 3e-36 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 6e-26 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 9e-34 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 4e-21 |
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 543 bits (1401), Expect = 0.0
Identities = 215/319 (67%), Positives = 261/319 (81%), Gaps = 1/319 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV Q G GQAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ+L GHQDVMVA
Sbjct: 59 MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVA 118
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GGMESMSNVP+ +NRG T YGG+ L D IV DGL+DVYNKIHMG+CAENTAKK NI+R+E
Sbjct: 119 GGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNE 178
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD YA++SY +S A++ F ++++PV++ + D++V EDEEYK+++F K L T
Sbjct: 179 QDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQ-PDVVVKEDEEYKRVDFSKVPKLKT 237
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240
VFQKENGTVTA NASTLNDGAAA VLMT +A ++ N PLARI+A+ DAA EPIDFPIAP
Sbjct: 238 VFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAP 297
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300
+A +LK+ G+ K+D+A+WE+NEAFS+VVLANIK L+IDP KVN++GGAVSLGHPIGM
Sbjct: 298 VYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGM 357
Query: 301 SGARIVIHLCHALKSGQKG 319
SGARIV HL HALK G+ G
Sbjct: 358 SGARIVGHLTHALKQGEYG 376
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 492 bits (1269), Expect = e-169
Identities = 193/302 (63%), Positives = 239/302 (79%), Gaps = 1/302 (0%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+V IVS +RTP+GSF SL L ATKLG++AI+ AI+KA + K +V+E YMGNV Q G G
Sbjct: 9 EVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEG 68
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
QAP RQAV+ AGLP ST CTT+NKVCASGMKAIM+ASQ+L GHQDVMVAGGMESMSNVP
Sbjct: 69 QAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVP 128
Query: 499 FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYK 558
+ +NRG T YGG+ L D IV DGL+DVYNKIHMG+CAENTAKK NI+R+EQD YA++SY
Sbjct: 129 YVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYT 188
Query: 559 KSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618
+S A++ F ++++PV++ + D++V EDEEYK+++F K L TVFQKENGTVT
Sbjct: 189 RSKAAWEAGKFGNEVIPVTVTVKGQ-PDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVT 247
Query: 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKN 678
A NASTLNDGAAA VLMT +A ++ N PLARI+A+ DAA EPIDFPIAP +A +LK+
Sbjct: 248 AANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKD 307
Query: 679 GG 680
G
Sbjct: 308 VG 309
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 457 bits (1179), Expect = e-155
Identities = 137/324 (42%), Positives = 189/324 (58%), Gaps = 7/324 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G+V AG GQ P RQA + AG+P S + +C SG+KA+ LA Q++ +G ++VA
Sbjct: 57 FGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVA 116
Query: 61 GGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GGME+MS P R K G M L D I+ DGL+D ++ HMG AEN AKK+ +SR+
Sbjct: 117 GGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSRE 176
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSL 178
+QD+ A+ S ++ +A K F +IVPV + RKG I V DE N E L
Sbjct: 177 DQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKG--LIEVKTDEFPRHGSNIEAMSKL 234
Query: 179 ATVFQKE-NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
F + GTVT NAS +NDGAAA VLM + K PLARI+++ EP
Sbjct: 235 KPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMG 294
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
I P AI + G + +DV ++EINEAF+ V A +K+L ++P KVN+ GGA++LGHP
Sbjct: 295 IGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHP 354
Query: 298 IGMSGARIVIHLCHALK--SGQKG 319
+G SG RI++ L H L+ +G
Sbjct: 355 LGASGCRILVTLLHTLERMGRSRG 378
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 423 bits (1089), Expect = e-142
Identities = 123/305 (40%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
V IVS +RT +GSF +L ++ LG+ I+ +++A + DV EV G+V AG G
Sbjct: 7 PVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCG 66
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA + AG+P S + +C SG+KA+ LA Q++ +G ++VAGGME+MS P
Sbjct: 67 QNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAP 126
Query: 499 FYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSY 557
R K G M L D I+ DGL+D ++ HMG AEN AKK+ +SR++QD+ A+ S
Sbjct: 127 HLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQ 186
Query: 558 KKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATVFQKE-NG 615
++ +A K F +IVPV + RKG I V DE N E L F + G
Sbjct: 187 NRTENAQKAGHFDKEIVPVLVSTRKG--LIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTG 244
Query: 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTL 675
TVT NAS +NDGAAA VLM + K PLARI+++ EP I P AI
Sbjct: 245 TVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQA 304
Query: 676 LKNGG 680
+ G
Sbjct: 305 VTKAG 309
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 451 bits (1164), Expect = e-153
Identities = 142/324 (43%), Positives = 203/324 (62%), Gaps = 7/324 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+GNV Q GLGQ RQ I AG+P S TVNK+C SG+K++ LA+Q+++ G DV++A
Sbjct: 56 IGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIA 115
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG E+MS P+ + R +K G + ++D ++ DGL D +N+ HMG AEN A KF +R
Sbjct: 116 GGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTR 175
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
+ QD+ AL S K+ +A KNN F +IVPV + R+GK +++DE K + FE
Sbjct: 176 EMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSK 234
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F+K +GTVTAGNAS +NDGAA +LM+++ + +PLA+I +Y A EP
Sbjct: 235 LKPAFKK-DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMG 293
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
P A LK G++ D+ L E NEAF+ LA +L ID SK+NV+GGA++LGHP
Sbjct: 294 TGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHP 353
Query: 298 IGMSGARIVIHLCHALK--SGQKG 319
IG SGARI++ L + ++ + G
Sbjct: 354 IGASGARILVTLIYEMQKRKVETG 377
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 418 bits (1077), Expect = e-140
Identities = 131/305 (42%), Positives = 188/305 (61%), Gaps = 5/305 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IVS RTP+GSF + SA +LG +A++ AI + ++ S++ EV +GNV Q GLG
Sbjct: 6 DVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLG 65
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q RQ I AG+P S TVNK+C SG+K++ LA+Q+++ G DV++AGG E+MS P
Sbjct: 66 QNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAP 125
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ + R +K G + ++D ++ DGL D +N+ HMG AEN A KF +R+ QD+ AL S
Sbjct: 126 YIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALES 185
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENG 615
K+ +A KNN F +IVPV + R+GK +++DE K + FE L F+K +G
Sbjct: 186 QNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK-DG 243
Query: 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTL 675
TVTAGNAS +NDGAA +LM+++ + +PLA+I +Y A EP P A
Sbjct: 244 TVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKA 303
Query: 676 LKNGG 680
LK G
Sbjct: 304 LKKAG 308
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 439 bits (1133), Expect = e-148
Identities = 136/323 (42%), Positives = 187/323 (57%), Gaps = 7/323 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ P RQA + AG+P+ +N++C SG++A+ L Q ++ G ++VA
Sbjct: 54 LGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVA 113
Query: 61 GGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GGMESMS P + RG K G +ID ++ DGL+D + HMG AEN AK++ +SRD
Sbjct: 114 GGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRD 173
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 178
EQD +A++S K+ A K+ F +IVP + RKG DI V+ DE + + L
Sbjct: 174 EQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F K GTVTAGNAS LNDGAAA +LM+E + +PL RI+++ +P
Sbjct: 232 RPAFDK-EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGT 290
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P A L+ G D+ L E NEAF+ A K L DPS VNV+GGA+++GHPI
Sbjct: 291 GPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPI 350
Query: 299 GMSGARIVIHLCHALK--SGQKG 319
G SGARI+ L +K +KG
Sbjct: 351 GASGARILNTLLFEMKRRGARKG 373
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 406 bits (1047), Expect = e-135
Identities = 119/304 (39%), Positives = 173/304 (56%), Gaps = 5/304 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+ I S +RT +GSF + + A +LGA I + +++A + +V EV +G V AG G
Sbjct: 4 SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA + AG+P+ +N++C SG++A+ L Q ++ G ++VAGGMESMS P
Sbjct: 64 QNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAP 123
Query: 499 FYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSY 557
+ RG K G +ID ++ DGL+D + HMG AEN AK++ +SRDEQD +A++S
Sbjct: 124 HCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQ 183
Query: 558 KKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGT 616
K+ A K+ F +IVP + RKG DI V+ DE + + L F K GT
Sbjct: 184 NKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKLRPAFDK-EGT 240
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTAGNAS LNDGAAA +LM+E + +PL RI+++ +P P A L
Sbjct: 241 VTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKAL 300
Query: 677 KNGG 680
+ G
Sbjct: 301 ERAG 304
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 438 bits (1130), Expect = e-148
Identities = 137/324 (42%), Positives = 197/324 (60%), Gaps = 8/324 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AGLGQ RQ + AG+P T+N VC SG++++ +ASQ ++LG D+M+
Sbjct: 58 LGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLV 117
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG E+MS P+ + R + G +D ++ DGLSD++N HMG AEN A+++NI+R
Sbjct: 118 GGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITR 177
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
+EQDE AL+S K+ A F +IVPV I RKG D +V++DE K EK
Sbjct: 178 EEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKG--DTVVDKDEYIKPGTTMEKLAK 235
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F K++GTVTAGNAS +NDGAA V+M +E + +PLA I++Y A +P
Sbjct: 236 LRPAF-KKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMG 294
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
P A L+ + +D+ L E NEAF+ +A I+ L+ID +KVNV+GGA+++GHP
Sbjct: 295 YGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHP 354
Query: 298 IGMSGARIVIHLCHALK--SGQKG 319
IG SGARI+ L + +K + G
Sbjct: 355 IGCSGARILTTLLYEMKRRDAKTG 378
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 405 bits (1044), Expect = e-135
Identities = 124/305 (40%), Positives = 179/305 (58%), Gaps = 6/305 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+V I S +RT +GSF + S+SA +LG A + AI++AN+ + E +G V AGLG
Sbjct: 8 EVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLG 67
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q RQ + AG+P T+N VC SG++++ +ASQ ++LG D+M+ GG E+MS P
Sbjct: 68 QNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSP 127
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ + R + G +D ++ DGLSD++N HMG AEN A+++NI+R+EQDE AL+S
Sbjct: 128 YLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALAS 187
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENG 615
K+ A F +IVPV I RKG D +V++DE K EK L F K++G
Sbjct: 188 QNKAEKAQAEGKFDEEIVPVVIKGRKG--DTVVDKDEYIKPGTTMEKLAKLRPAF-KKDG 244
Query: 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTL 675
TVTAGNAS +NDGAA V+M +E + +PLA I++Y A +P P A
Sbjct: 245 TVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKA 304
Query: 676 LKNGG 680
L+
Sbjct: 305 LEAAN 309
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 407 bits (1048), Expect = e-135
Identities = 130/324 (40%), Positives = 191/324 (58%), Gaps = 9/324 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G+ Q R A + AG P + T+ + C+SGM+AIM A+ + LG +V+VA
Sbjct: 56 LGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVA 115
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG+E+MS+ P+ L R + + D + + L D + I MG AEN +++ I+R
Sbjct: 116 GGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGETAENLVEQYEITR 174
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
+EQDE AL S+ + A ++ F QIVP++I +R+ +++ ++DE + I EK
Sbjct: 175 EEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRK--EVVFSKDEHPRADITAEKLAG 232
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F +++G+VTAGNAS LNDG+A VLM+EE ++ +PLARI+ Y A +P
Sbjct: 233 LKPAF-RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMG 291
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
I PA AI L+ + +D L EINEAF+ LA K+LD+D KVNV+G V LGHP
Sbjct: 292 IGPAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHP 351
Query: 298 IGMSGARIVIHLCHALK--SGQKG 319
IG +GARI + L H LK +KG
Sbjct: 352 IGCTGARITVSLIHELKRRGLEKG 375
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 376 bits (968), Expect = e-124
Identities = 106/305 (34%), Positives = 176/305 (57%), Gaps = 7/305 (2%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+V I + R+P+G+F +L +++ +L ++ A+++ ++ +V EV +G+ Q
Sbjct: 6 NVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDE 65
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
R A + AG P + T+ + C+SGM+AIM A+ + LG +V+VAGG+E+MS+ P
Sbjct: 66 ANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSP 125
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ L R + + D + + L D + I MG AEN +++ I+R+EQDE AL S
Sbjct: 126 YALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRS 184
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENG 615
+ + A ++ F QIVP++I +R+ +++ ++DE + I EK L F +++G
Sbjct: 185 HTLALKAIESGYFDDQIVPITIKERRK--EVVFSKDEHPRADITAEKLAGLKPAF-RKDG 241
Query: 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTL 675
+VTAGNAS LNDG+A VLM+EE ++ +PLARI+ Y A +P I PA AI
Sbjct: 242 SVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKG 301
Query: 676 LKNGG 680
L+
Sbjct: 302 LEKVD 306
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 373 bits (961), Expect = e-122
Identities = 111/320 (34%), Positives = 163/320 (50%), Gaps = 12/320 (3%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV G G R A + +G+P ST +N+ C+SG+ A+ + + +G D+ +A
Sbjct: 66 CGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLA 125
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
G+ESM+N +N + + I MG EN A F ISR +
Sbjct: 126 LGVESMTNNYKNVNPLG------MISSEELQKNREAKKCLIPMGITNENVAANFKISRKD 179
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLA 179
QDE+A +SY+K+ A +F +I+P+ +P I DE + + E S+
Sbjct: 180 QDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGS-----ICQSDEGPRPNVTAESLSSIR 234
Query: 180 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239
F K+ GT TAGNAS ++DG A +L + N L R I + P +
Sbjct: 235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVG 294
Query: 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIG 299
PA+AIP +L+ G+ QD+ ++EINEAF+ L I KL ID +KVN GGA++LGHP+G
Sbjct: 295 PAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLG 354
Query: 300 MSGARIVIHLCHALKSGQKG 319
+GAR V + LK Q G
Sbjct: 355 CTGARQVATILRELKKDQIG 374
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 322 bits (827), Expect = e-103
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 17/311 (5%)
Query: 376 KPGDVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQK----ANMDKSDVQEVYMG 430
+P DV IV+ +R+ +G F+ + ++ L + I + D + ++EV G
Sbjct: 8 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACG 67
Query: 431 NVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
NV G G R A + +G+P ST +N+ C+SG+ A+ + + +G D+ +A G
Sbjct: 68 NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALG 127
Query: 491 MESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
+ESM+N +N + + I MG EN A F ISR +QD
Sbjct: 128 VESMTNNYKNVNPLG------MISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQD 181
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATV 609
E+A +SY+K+ A +F +I+P+ +P I DE + + E S+
Sbjct: 182 EFAANSYQKAYKAKNEGLFEDEILPIKLPDGS-----ICQSDEGPRPNVTAESLSSIRPA 236
Query: 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 669
F K+ GT TAGNAS ++DG A +L + N L R I + P + PA
Sbjct: 237 FIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPA 296
Query: 670 FAIPTLLKNGG 680
+AIP +L+ G
Sbjct: 297 YAIPKVLEATG 307
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 365 bits (940), Expect = e-119
Identities = 117/332 (35%), Positives = 187/332 (56%), Gaps = 16/332 (4%)
Query: 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G QAG + R A++ AG P TVN++C SG++A+ A++ + G V +
Sbjct: 53 AGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYI 112
Query: 60 AGGMESMSNVPFYLNRGETKY--GGMNLID-----GIVYDGLSDVYNKIHMGNCAENTAK 112
G+ESMS P+ + + E + G + + D V + +Y MG AEN A+
Sbjct: 113 GSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAE 172
Query: 113 KFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-IN 171
+ I R+EQD +AL S++K+ A++ F ++VPV + + K +I+V +DE ++ +
Sbjct: 173 MYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTS 230
Query: 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT 231
EK +L VF +E GTVTAGN+S LNDGAAA +L++++ + +PLAR+ A A
Sbjct: 231 LEKLAALRPVF-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGV 289
Query: 232 EPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIK--KLDIDPSKVNVHG 289
P I P A L+ G++ D+ L E+NEAF+ LA ++ L ++ ++N +G
Sbjct: 290 PPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNG 349
Query: 290 GAVSLGHPIGMSGARIVIHLCHALK--SGQKG 319
GA++LGHP+G SGARI+ L H ++ Q G
Sbjct: 350 GAIALGHPLGASGARILTTLVHEMRRRKVQFG 381
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 341 bits (877), Expect = e-110
Identities = 104/311 (33%), Positives = 169/311 (54%), Gaps = 12/311 (3%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL- 437
+ +IV RTP+G +L S+ L A A+ + ++ + K +V++VY G QAG
Sbjct: 3 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGED 62
Query: 438 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
+ R A++ AG P TVN++C SG++A+ A++ + G V + G+ESMS
Sbjct: 63 NRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA 122
Query: 498 PFYLNRGETKY--GGMNLID-----GIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
P+ + + E + G + + D V + +Y MG AEN A+ + I R+EQD
Sbjct: 123 PYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQD 182
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATV 609
+AL S++K+ A++ F ++VPV + + K +I+V +DE ++ + EK +L V
Sbjct: 183 RFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTSLEKLAALRPV 240
Query: 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 669
F +E GTVTAGN+S LNDGAAA +L++++ + +PLAR+ A A P I P
Sbjct: 241 F-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPV 299
Query: 670 FAIPTLLKNGG 680
A L+ G
Sbjct: 300 PATRKALERAG 310
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 353 bits (907), Expect = e-114
Identities = 114/318 (35%), Positives = 169/318 (53%), Gaps = 14/318 (4%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+GNV Q G G R A + +P++ +TVN+ C+SG++A+ + + G D+ +A
Sbjct: 82 VGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMA 141
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
G+ESMS T + D I MG +EN A++F ISR++
Sbjct: 142 CGVESMSLADRGNPGNITSRLMEK-------EKARDCL--IPMGITSENVAERFGISREK 192
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVS--IPQRKG-KADIIVNEDEEYKK-INFEKFK 176
QD +AL+S +K+A A F ++IVPV+ + KG K I V +DE + E
Sbjct: 193 QDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLA 252
Query: 177 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF 236
L F K++G+ TAGN+S ++DGAAA +L + L + +Y P
Sbjct: 253 KLKPAF-KKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIM 311
Query: 237 PIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGH 296
I PA+AIP L+ G+ DV ++EINEAF+ ++KL + P KVN GGAV+LGH
Sbjct: 312 GIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGH 371
Query: 297 PIGMSGARIVIHLCHALK 314
P+G +GAR VI L + LK
Sbjct: 372 PLGCTGARQVITLLNELK 389
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 304 bits (782), Expect = 5e-96
Identities = 92/310 (29%), Positives = 150/310 (48%), Gaps = 15/310 (4%)
Query: 376 KPGDVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ 434
DV +V G RT + + R + +L + + + ++ N+ + ++ +GNV Q
Sbjct: 28 SAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQ 87
Query: 435 AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
G G R A + +P++ +TVN+ C+SG++A+ + + G D+ +A G+ESM
Sbjct: 88 PGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESM 147
Query: 495 SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 554
S T + D I MG +EN A++F ISR++QD +AL
Sbjct: 148 SLADRGNPGNITSRLMEK-------EKARDCL--IPMGITSENVAERFGISREKQDTFAL 198
Query: 555 SSYKKSADAYKNNVFSSQIVPVS--IPQRKG-KADIIVNEDEEYKK-INFEKFKSLATVF 610
+S +K+A A F ++IVPV+ + KG K I V +DE + E L F
Sbjct: 199 ASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAF 258
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
K++G+ TAGN+S ++DGAAA +L + L + +Y P I PA+
Sbjct: 259 -KKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAY 317
Query: 671 AIPTLLKNGG 680
AIP L+ G
Sbjct: 318 AIPVALQKAG 327
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 349 bits (897), Expect = e-113
Identities = 102/326 (31%), Positives = 152/326 (46%), Gaps = 19/326 (5%)
Query: 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G V Q G R A + +P ++ TV+++C S M A+ A+Q + G+ DV V
Sbjct: 58 WGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFV 117
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GG+E M +V +D + L MG AE K ISR+
Sbjct: 118 VGGVEHMGHVSM----------MHG-VDPNPHMSLYAAKASGMMGLTAEMLGKMHGISRE 166
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSL 178
+QD +A+ S++ + A F +I+P+ G I + DE + E +L
Sbjct: 167 QQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETIRPDTTLESLAAL 225
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F + GTVTAG +S + DGA+ ++M+ + + +PLA I + A +P
Sbjct: 226 KPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGY 285
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL---DIDPSKVNVHGGAVSLG 295
P A LK G+ D+ E+NEAF+ L +K L D KVN+HGGA++LG
Sbjct: 286 GPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALG 345
Query: 296 HPIGMSGARIVIHLCHALK--SGQKG 319
HP G SGARI L + +K G G
Sbjct: 346 HPFGCSGARISGTLLNVMKQNGGTFG 371
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 312 bits (802), Expect = 3e-99
Identities = 87/306 (28%), Positives = 137/306 (44%), Gaps = 16/306 (5%)
Query: 379 DVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAG 436
DV IV RTPMG S + A + A I +++ + +D +V++V G V Q
Sbjct: 6 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTL 65
Query: 437 -LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
G R A + +P ++ TV+++C S M A+ A+Q + G+ DV V GG+E M
Sbjct: 66 EQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125
Query: 496 NVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALS 555
+V +D + L MG AE K ISR++QD +A+
Sbjct: 126 HVSM----------MHG-VDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVR 174
Query: 556 SYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKEN 614
S++ + A F +I+P+ G I + DE + E +L F +
Sbjct: 175 SHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETIRPDTTLESLAALKPAFNPKG 233
Query: 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPT 674
GTVTAG +S + DGA+ ++M+ + + +PLA I + A +P P A
Sbjct: 234 GTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQK 293
Query: 675 LLKNGG 680
LK G
Sbjct: 294 ALKRAG 299
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 349 bits (897), Expect = e-112
Identities = 105/320 (32%), Positives = 164/320 (51%), Gaps = 16/320 (5%)
Query: 1 MGNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
+G V G +A CR A +AG P++ TVN+ C+SG++A+ + + G D+ +
Sbjct: 82 VGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGI 141
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
G+ESM+ P ++ V + MG +EN A++F +SR
Sbjct: 142 GAGLESMTTNP---------MAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQ 192
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVS---IPQRKGKA-DIIVNEDEEYKK-INFEK 174
EQD+ A+ S++K+A A F +I+PV + + G I V+ D+ +
Sbjct: 193 EQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLAS 252
Query: 175 FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 234
L VF K++GT TAGN+S ++DGA A +LM + L + +P
Sbjct: 253 LGKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA 311
Query: 235 DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSL 294
I PA AIP +K G+ D+ L+EINEAF+ + KL +DP K+NV+GGA+++
Sbjct: 312 IMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAI 371
Query: 295 GHPIGMSGARIVIHLCHALK 314
GHP+G +GAR V L H +K
Sbjct: 372 GHPLGATGARCVATLLHEMK 391
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 304 bits (780), Expect = 2e-95
Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 17/325 (5%)
Query: 363 LAPDAKASRNFASKPGDVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKANMDK 421
+A D+ A + + DV IV+ RTP+ S R + L A + + I+K N++
Sbjct: 15 MAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNP 74
Query: 422 SDVQEVYMGNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480
S+V ++ +G V G +A CR A +AG P++ TVN+ C+SG++A+ + +
Sbjct: 75 SEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKA 134
Query: 481 GHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAK 540
G D+ + G+ESM+ P ++ V + MG +EN A+
Sbjct: 135 GFYDIGIGAGLESMTTNP---------MAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQ 185
Query: 541 KFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVS---IPQRKGKA-DIIVNEDEEYK 596
+F +SR EQD+ A+ S++K+A A F +I+PV + + G I V+ D+ +
Sbjct: 186 RFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIR 245
Query: 597 K-INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYF 655
L VF K++GT TAGN+S ++DGA A +LM + L +
Sbjct: 246 PTTTLASLGKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFA 304
Query: 656 DAATEPIDFPIAPAFAIPTLLKNGG 680
+P I PA AIP +K G
Sbjct: 305 AVGVDPAIMGIGPAVAIPAAVKAAG 329
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 332 bits (854), Expect = e-107
Identities = 100/320 (31%), Positives = 158/320 (49%), Gaps = 19/320 (5%)
Query: 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G V Q G R A + A +P S TVN++C S M+A+ A++ + G V +
Sbjct: 55 WGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCL 114
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNL-IDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG+E M +VP + + ++ MG AE ++ ISR
Sbjct: 115 VGGVEHMGHVPM----------SHGVDFHPGLSRNVAKAA--GMMGLTAEMLSRLHGISR 162
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
+ QD++A S+ ++ A ++ F ++I+P G N DE + E +
Sbjct: 163 EMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALST 221
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F +GTVTAG +S L+DGAAA ++M+E R+ KP ARI + +P
Sbjct: 222 LRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMG 281
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAVSL 294
P A LK G++ D+ ++E+NEAF+ +L IK L + K+N++GGA++L
Sbjct: 282 YGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIAL 341
Query: 295 GHPIGMSGARIVIHLCHALK 314
GHP+G SGARI L + ++
Sbjct: 342 GHPLGCSGARISTTLINLME 361
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 2e-92
Identities = 88/307 (28%), Positives = 140/307 (45%), Gaps = 18/307 (5%)
Query: 379 DVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAG 436
V IV RTPMG S + ++ A L A + S + + ++ + + ++Y G V Q
Sbjct: 3 QVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTL 62
Query: 437 -LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
G R A + A +P S TVN++C S M+A+ A++ + G V + GG+E M
Sbjct: 63 EQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMG 122
Query: 496 NVPFYLNRGETKYGGMNL-IDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 554
+VP + + ++ MG AE ++ ISR+ QD++A
Sbjct: 123 HVPM----------SHGVDFHPGLSRNVAKAA--GMMGLTAEMLSRLHGISREMQDQFAA 170
Query: 555 SSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKE 613
S+ ++ A ++ F ++I+P G N DE + E +L F
Sbjct: 171 RSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALSTLRPAFDPV 229
Query: 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIP 673
+GTVTAG +S L+DGAAA ++M+E R+ KP ARI + +P P A
Sbjct: 230 SGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASK 289
Query: 674 TLLKNGG 680
LK G
Sbjct: 290 LALKKAG 296
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 282 bits (724), Expect = 1e-87
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 38/337 (11%)
Query: 1 MGNVCQAGLGQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVM 58
+G V G Q R AV+ AGLP++T +N+ CASG++A+ A+Q + G D++
Sbjct: 60 LGVVSPVG-DQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLV 118
Query: 59 VAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
+AGG+ESMS VP + G + + + G A+ A SR
Sbjct: 119 LAGGVESMSRVPMGSDGG---AWATDP-------ETNYRIGFVPQGIGADLIATLEGFSR 168
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
++ D YAL S +K+A A+ F+ +VPV R +I++ DE + E
Sbjct: 169 EDVDAYALRSQQKAAAAWSGGYFAKSVVPV----RDQNGLVILDHDEHMRPDTTMEGLAK 224
Query: 178 LATVFQ--------------------KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA 217
L T F K N T GN+S + DGAA ++ +E+A +
Sbjct: 225 LKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGL 284
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
P ARI+A + ++P+ P A +L G+ D+ L+E+NEAF+ VVL K
Sbjct: 285 TPRARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKD 344
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
L+I K+NV+GGA+++GHP+G +GA I + L+
Sbjct: 345 LNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELE 381
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 8e-65
Identities = 89/327 (27%), Positives = 147/327 (44%), Gaps = 40/327 (12%)
Query: 379 DVFIVSGSRTPMGSFRS-SLVSLSATKLGAVAIESAIQKAN-MDKSDVQEVYMGNVCQAG 436
+ FI RTP G ++ SL + L ++ ++ +D++ + ++ +G V G
Sbjct: 8 EAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVG 67
Query: 437 LGQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
Q R AV+ AGLP++T +N+ CASG++A+ A+Q + G D+++AGG+ESM
Sbjct: 68 -DQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESM 126
Query: 495 SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 554
S VP + G + + + G A+ A SR++ D YAL
Sbjct: 127 SRVPMGSDGG---AWATDP-------ETNYRIGFVPQGIGADLIATLEGFSREDVDAYAL 176
Query: 555 SSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQ-- 611
S +K+A A+ F+ +VPV R +I++ DE + E L T F
Sbjct: 177 RSQQKAAAAWSGGYFAKSVVPV----RDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGV 232
Query: 612 ------------------KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
K N T GN+S + DGAA ++ +E+A + P ARI+A
Sbjct: 233 GEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVA 292
Query: 654 YFDAATEPIDFPIAPAFAIPTLLKNGG 680
+ ++P+ P A +L G
Sbjct: 293 TATSGSDPVIMLTGPTPATRKVLDRAG 319
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 76.8 bits (188), Expect = 2e-14
Identities = 81/572 (14%), Positives = 157/572 (27%), Gaps = 198/572 (34%)
Query: 320 QLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPTLYPKIRELAPDAKASRNFASKPGD 379
Q + + N Q ++ V R Y K+R+ + + P
Sbjct: 115 QRDRLY---NDNQVFAKYNVSR------------LQPYLKLRQALLELR--------PAK 151
Query: 380 VFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVY---MGNVCQA 435
++ G + ++ + V + +Q K ++ + N
Sbjct: 152 NVLIDG----VLGSGKTWVAL-------DVCLSYKVQCKMDFK-----IFWLNLKNCNSP 195
Query: 436 GLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
+ ++ Q L D + S
Sbjct: 196 ---------------------------------ETVLEMLQKLLY-QIDPNWTSRSDHSS 221
Query: 496 NVPFYLNRGETKYGGMNLIDGIVYDG----LSDVYNKIHMGNCAENTAKKFNI------- 544
N+ ++ + L+ Y+ L +V N FN+
Sbjct: 222 NIKLRIH--SIQAELRRLLKSKPYENCLLVLLNVQNA--------KAWNAFNLSCKILLT 271
Query: 545 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDE--EY--KKINF 600
+R +Q LS+ + + DE K ++
Sbjct: 272 TRFKQVTDFLSAATTT-------------HISLDHHSMT-----LTPDEVKSLLLKYLD- 312
Query: 601 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE 660
+ + L N + A ++ DG A T + + N L II E
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLA-----TWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 661 P-------IDFPIAPAFA-IPTLLKNGGQLSQFWYD--ENTTQRLSEE-----AVCRAGK 705
P + P A IPT+L LS W+D ++ + + V + K
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTIL-----LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 706 EGSIALISCPTLYPKIRELAPDAKDVPRELSAHYDLV-VLDPPFLSDEC----------- 753
E +I++ P++Y +++ + + R + HY++ D L
Sbjct: 423 ESTISI---PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479
Query: 754 -LTKAAVTAKLPLF------------------VSLTVSGEI---MQDLAL---------- 781
L ++ LF + SG I +Q L
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539
Query: 782 ---RLLGVKKCKFIPRHKNNLAN-DFACFVNF 809
RL+ F+P+ + NL + +
Sbjct: 540 KYERLVNAIL-DFLPKIEENLICSKYTDLLRI 570
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 3e-07
Identities = 48/351 (13%), Positives = 95/351 (27%), Gaps = 95/351 (27%)
Query: 20 FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79
+G P T CA+ ++++ + +T+ G + + GG + G +
Sbjct: 1095 SSG-PIKTPVGA----CATSVESVDIGVETILSGKARICIVGGYDDFQ------EEGSFE 1143
Query: 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD-------------EQDEYAL 126
+G M S+ + G ++ +R+ Q + AL
Sbjct: 1144 FGNMK--------ATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLAL 1195
Query: 127 ----------SSYKKSADAYKNNVFSSQIVPVSIPQ---------RKGKADI---IVNED 164
+ + D S+P R+ + + N +
Sbjct: 1196 KMGVPIYGIVAMAATATDKIG----------RSVPAPGKGILTTAREHHSSVKYASPNLN 1245
Query: 165 EEYKKINFEKFKSLATVFQKENGTVTAGNA---ST-LNDGAAACVLMTEEAVRKFNAKPL 220
+Y+K A + + A D + T E + A+
Sbjct: 1246 MKYRKRQLV--TREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNE--AESQ 1301
Query: 221 ARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVA----------LWEINEAFSVV 270
R P L G+ D+ + NE+ +
Sbjct: 1302 LRAAQQQWGNDFYKRDPRIAPLR--GALATYGLTIDDLGVASFHGTSTKANDKNESAT-- 1357
Query: 271 VLANIKKLDIDPSKVNVHGGAVS-----LGHPIGMSGARIVIHLCHALKSG 316
I ++ + + GHP G +GA ++ L SG
Sbjct: 1358 ----INEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSG 1404
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 9e-05
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 448 FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
+G P T CA+ ++++ + +T+ G + + GG +
Sbjct: 1095 SSG-PIKTPVGA----CATSVESVDIGVETILSGKARICIVGGYDDFQ 1137
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.93 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.93 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.92 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.92 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.92 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.92 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.91 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.91 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.91 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.91 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.91 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.91 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.9 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.9 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.89 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.89 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.87 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.87 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.85 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.83 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.79 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.77 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.77 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.76 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.76 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.75 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.72 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.71 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.71 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.7 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.68 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.68 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.68 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.68 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.68 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.67 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.66 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.66 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.65 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.65 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.65 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.65 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.64 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.64 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.63 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.58 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.56 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.55 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.55 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.53 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.52 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.51 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.51 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.5 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.5 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.48 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.47 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.43 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.42 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.42 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.41 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.35 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.35 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.34 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.34 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.34 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.33 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.33 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.32 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.32 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.28 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.28 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.26 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.26 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.26 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.23 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.23 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.22 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.19 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.18 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.17 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.16 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.16 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.14 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.12 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.12 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.12 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.09 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.06 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.06 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.06 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.05 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.05 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.04 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.03 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.03 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.01 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.01 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.01 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.0 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.99 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 98.99 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 98.99 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 98.99 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 98.99 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 98.97 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 98.97 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 98.97 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 98.95 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 98.95 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 98.94 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 98.94 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 98.93 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 98.93 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 98.91 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 98.9 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 98.89 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 98.87 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.83 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 98.81 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 98.8 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 98.79 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 98.73 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 98.71 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 98.69 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 98.66 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.36 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.36 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 98.08 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 96.52 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 83.17 |
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-57 Score=507.09 Aligned_cols=334 Identities=40% Similarity=0.651 Sum_probs=302.1
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|++|+.|+... +...+
T Consensus 59 g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~ 138 (396)
T 4dd5_A 59 GGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGAR 138 (396)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCC
T ss_pred EeecCCCCCchHHHHHHHHcCCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccc
Confidence 4555555678999999999999878999999999999999999999999999999999999999999887542 22333
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++...+.+.+..+++.+++....|++.|++||++||+|||+||+|++++|+||.+|+++|+|++||+|++++++|| +..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~-~~~ 217 (396)
T 4dd5_A 139 MGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKG-DTV 217 (396)
T ss_dssp SSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC-----CEE
T ss_pred cCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCC-cee
Confidence 4444444444456677777677899999999999999999999999999999999999999999999999998887 457
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+++|+++|+|++.++||+|++ +|++|++|||+++|||+++||++++.|++++.+|+++|.|++.++++|..++.+
T Consensus 218 ~~~d~~~r~~~t~e~l~~~~~v~~p-~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~ 296 (396)
T 4dd5_A 218 VDKDEYIKPGTTMEKLAKLRPAFKK-DGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYG 296 (396)
T ss_dssp ECSCSCCCTTCCHHHHHHCCBSSST-TCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGT
T ss_pred ecCcccccCCCCHHHHhhCCCccCC-CCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHH
Confidence 8999999999999999999999954 489999999999999999999999999999999999999999988889888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||+||+||+|+++.+.++|.||+++.|+|++||++++|||+|++|+++++++++|||+ ++
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~ 376 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAK 376 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+||+++ |+|||+|.+++||.
T Consensus 377 ~gl~~~----------------c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 377 TGLATL----------------CIGGGMGTTLIVKR 396 (396)
T ss_dssp EEEEEE----------------EETTTEEEEEEEEC
T ss_pred eEEEEE----------------cccCCceeEEEEeC
Confidence 999998 99999999999983
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-57 Score=505.82 Aligned_cols=334 Identities=33% Similarity=0.551 Sum_probs=290.1
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcc
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGET 78 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~ 78 (814)
|++.+... +++++++++..+|++..+|+++++++|+|++.||.+|+++|++|++|+|||+|+|++|..|+... +...
T Consensus 54 g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~ 133 (401)
T 1ulq_A 54 GCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGF 133 (401)
T ss_dssp ECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSS
T ss_pred EecccCCCCCChHHHHHHHHhCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccc
Confidence 44444433 57899999999999877999999999999999999999999999999999999999998776332 1111
Q ss_pred cCCCCcccccc----cccCcc-cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC
Q psy12877 79 KYGGMNLIDGI----VYDGLS-DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR 153 (814)
Q Consensus 79 ~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~ 153 (814)
+.+...+.+.+ ...++. +.+....|++.|++||++||+|||++|+||+.||+||..||++|+|++||+|++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~ 213 (401)
T 1ulq_A 134 PTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG 213 (401)
T ss_dssp CCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET
T ss_pred ccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCC
Confidence 11110010100 112221 1222356999999999999999999999999999999999999999999999998777
Q ss_pred CCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 154 KGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 154 ~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
||+ ..+++|+.+|+++|+|++.++||+|++ +||+|++|||+++|||+||||+|+++|++++.+|+++|+|++.++++|
T Consensus 214 ~~~-~~~~~d~~~r~~~t~e~~~~~rpif~~-~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p 291 (401)
T 1ulq_A 214 KEE-ILVEQDEGPRRDTSLEKLAALRPVFRE-GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP 291 (401)
T ss_dssp TEE-EEECSCSCCCTTCCHHHHHHSCBSSST-TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG
T ss_pred CCc-eeeccccccCCCCCHHHHhhCCCccCC-CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCc
Confidence 653 568999999999999999999999965 589999999999999999999999999999999999999999999888
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC--CCcccCCCCccccCCCCChHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP--SKVNVHGGAVSLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gasG~~~l~e~v~ 311 (814)
..++.++..+++++|+++|++++|||+||+||+|+++++.++|+||+|+ .|+|++||++++|||+|+||+++++++++
T Consensus 292 ~~~~~~~~~a~~~al~~Agl~~~dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~ 371 (401)
T 1ulq_A 292 RIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVH 371 (401)
T ss_dssp GGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHcCCCHHHcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999999999964 58999999999999999999999999999
Q ss_pred HHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 312 ALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 312 qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||+ ++++++++ |+|||++.+++||.
T Consensus 372 ~L~~~~~~~gl~~~----------------~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 372 EMRRRKVQFGLATM----------------CIGVGQGIAVVVEG 399 (401)
T ss_dssp HHHHTTCSEEEEEE----------------EETTTEEEEEEEEE
T ss_pred HHhhcCCCEEEEEe----------------ecCCcccEEEEEEe
Confidence 9998 67888887 99999999999985
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=503.38 Aligned_cols=335 Identities=41% Similarity=0.639 Sum_probs=295.6
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc-cCcccC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKY 80 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~-~~~~~~ 80 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+||+.||.+|+++|++|++|+|||+|+|+||..|+... +...+.
T Consensus 58 g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~ 137 (397)
T 1wl4_A 58 GHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKI 137 (397)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSS
T ss_pred EecCCCCCCCHHHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccc
Confidence 4555544468899999999999878999999999999999999999999999999999999999998776432 111111
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+.....+....+++.+++....|++.+++||++||+|||+||+||+++|+||.+|+..|+|++||+|++++.+||+ ..+
T Consensus 138 ~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~ 216 (397)
T 1wl4_A 138 GEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL-IEV 216 (397)
T ss_dssp SCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE-EEE
T ss_pred CcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc-eee
Confidence 1111122222234444444467999999999999999999999999999999999999999999999998877653 567
Q ss_pred ccCCccccCCCHHhhhcCCceecc-CCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~-~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
++|+.+|+++|+|++.++||+|++ .+|++|++|||+++|||+|+||+|+++|++++.+|+++|+|++..+.+|..++.+
T Consensus 217 ~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~ 296 (397)
T 1wl4_A 217 KTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIG 296 (397)
T ss_dssp CSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGT
T ss_pred ccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccch
Confidence 899999999999999999998854 3489999999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+|++|+++++++++|||+ ++
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~ 376 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRS 376 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 377 ~gl~~~----------------~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 377 RGVAAL----------------CIGGGMGIAMCVQR 396 (397)
T ss_dssp EEEEEE----------------EETTTEEEEEEEEE
T ss_pred EEEEEE----------------ecccchheEEEEEe
Confidence 899997 99999999999985
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=500.65 Aligned_cols=325 Identities=31% Similarity=0.450 Sum_probs=293.5
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++++++..+|++..+|+++|+++|+|++.+|++|+++|++|++|+|||+|+|+||+.|+.. +.
T Consensus 56 g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~-----~~ 130 (387)
T 3goa_A 56 GCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSH-----GV 130 (387)
T ss_dssp ECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTT-----TB
T ss_pred EcccCCcccccHHHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCcccc-----cc
Confidence 56666554 7899999999999988899999999999999999999999999999999999999999988641 11
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+ . .+ ..+.+.+++ ...|++.|++||++||+|||+||+|++.+|+||..|+++|+|++||+|++++.+||+...+
T Consensus 131 ~---~-~~-~~~~~~~~~-~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~ 204 (387)
T 3goa_A 131 D---F-HP-GLSRNVAKA-AGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQF 204 (387)
T ss_dssp C---C-CT-TCC--------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEE
T ss_pred C---c-Cc-ccccccccc-cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCccccc
Confidence 1 0 11 123334444 5679999999999999999999999999999999999999999999999999888876789
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++|+.+|+++|+|++.++||+|++++|++|++|||+++|||+++||+++++|++++.+|+++|+|++.+.++|..++.++
T Consensus 205 ~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~ 284 (387)
T 3goa_A 205 NYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGP 284 (387)
T ss_dssp CSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTH
T ss_pred ccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHH
Confidence 99999999999999999999995535789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC---CcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
..+++++|+++||+++|||++|+||+|+.+++.++|.||+|++ |+|++||++++|||+|++|+++++++++|||+
T Consensus 285 ~~a~~~al~~agl~~~did~ve~h~~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~ 364 (387)
T 3goa_A 285 VPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKD 364 (387)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeCcchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999654 89999999999999999999999999999998
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++|++++ |+|||+|.+++||.
T Consensus 365 ~~~gl~~~----------------c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 365 AQFGLATM----------------CIGLGQGIATVFER 386 (387)
T ss_dssp CSEEEEEE----------------EETTTEEEEEEEEC
T ss_pred CCEEEEEe----------------ccCcCceEEEEEEe
Confidence 78999998 99999999999984
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-56 Score=502.00 Aligned_cols=333 Identities=40% Similarity=0.592 Sum_probs=302.5
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|+||+.|+... +...+
T Consensus 57 g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~ 136 (394)
T 3ss6_A 57 GHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQR 136 (394)
T ss_dssp ECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCC
T ss_pred EEccCCCccchHHHHHHHHcCCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccc
Confidence 5555555578999999999999878999999999999999999999999999999999999999999887432 22223
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++.....+.+. +++.+++....|++.|++||++||+|||+||+|+++||+||..|+++|+|++||+|++++++||+ ..
T Consensus 137 ~~~~~~~~~~~-~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~-~~ 214 (394)
T 3ss6_A 137 LQHGEIRDTVW-EVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE-VV 214 (394)
T ss_dssp SSCCCCEEHHH-HHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE-EE
T ss_pred cCCcccccccc-cccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc-ee
Confidence 33333333322 45566777778999999999999999999999999999999999999999999999999888874 57
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+.+|+++|+|++.+++|+|++ +|++|++|||+++|||+++||++++.|++++.+|+++|.|++....+|..++.+
T Consensus 215 ~~~d~~~R~~~t~e~~~~~~pvf~~-~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~ 293 (394)
T 3ss6_A 215 FSKDEHPRADITAEKLAGLKPAFRK-DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIG 293 (394)
T ss_dssp ECSCCCCCTTCCHHHHHTCCBSSST-TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGT
T ss_pred ecccccccCCCCHHHHhhCCCccCC-CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHH
Confidence 8999999999999999999999954 489999999999999999999999999999999999999999988889888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||++|+||+|+.+.+.+.|.||++++|+|++||++++|||.|+||+++++++++||++ ++
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~ 373 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLE 373 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 374 ~gl~~~----------------c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 374 KGIASL----------------CVGGGIGVALFIEA 393 (394)
T ss_dssp EEEEEE----------------EETTTEEEEEEEEE
T ss_pred EEEEEE----------------ccCcCceeEEEEEc
Confidence 999998 99999999999984
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-56 Score=499.46 Aligned_cols=334 Identities=40% Similarity=0.626 Sum_probs=294.4
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCc-cccCcccC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY-LNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~-~~~~~~~~ 80 (814)
|++++.+.+++++++++..+|++..+|+++++++|+||+.||.+|+++|++|++|+|||+|+|+||..|+. ..+...++
T Consensus 55 g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~ 134 (392)
T 2vu1_A 55 GQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKM 134 (392)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCS
T ss_pred EecCCCCCCcHHHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCcccccccccccc
Confidence 55555555689999999999998559999999999999999999999999999999999999999987763 10111111
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+.....+.+..+++.+++....|++.+++||++||+|||++|+|++++|+||.+||++|+|++||+|++.+.+|| ...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~-~~~f 213 (392)
T 2vu1_A 135 GDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG-DITV 213 (392)
T ss_dssp SCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTC-CEEE
T ss_pred CcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCC-ceee
Confidence 110111111223344444455799999999999999999999999999999999999999999999999887766 3568
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++||.+|+++|+|+++++||+|++ +|++|++|||+++|||+|+||+++++|++++.+|+++|+|++....+|..++.++
T Consensus 214 ~~d~~~r~~~t~e~~~~~~~v~~~-~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~ 292 (392)
T 2vu1_A 214 DADEYIRHGATLDSMAKLRPAFDK-EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGP 292 (392)
T ss_dssp CSCSSCCTTCCHHHHHTCCCSSCT-TCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTH
T ss_pred ccccccCCCCCHHHHhcCCCccCC-CCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhH
Confidence 999999999999999999999943 4999999999999999999999999999999999999999999988888888899
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCC
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQK 318 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~ 318 (814)
..+++++|+++|++++|||+||+||+|+.+.+.++|.||++++|+|++||++++|||+|++|+++++++++|||+ +++
T Consensus 293 ~~a~~~al~~agl~~~dId~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~ 372 (392)
T 2vu1_A 293 IPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARK 372 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCCCE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 788
Q ss_pred CCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 319 GQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 319 gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|++++ |+|||++.+++||.
T Consensus 373 gl~~~----------------~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 373 GLATL----------------CIGGGMGVAMCIES 391 (392)
T ss_dssp EEEEE----------------EETTTEEEEEEEEC
T ss_pred EEEEE----------------ecccchheEEEEEe
Confidence 99987 99999999999985
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-56 Score=500.53 Aligned_cols=335 Identities=43% Similarity=0.684 Sum_probs=303.6
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|+||+.|+... +...+
T Consensus 57 g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~ 136 (395)
T 4e1l_A 57 GNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSK 136 (395)
T ss_dssp ECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEE
T ss_pred EeccCCCCcchHHHHHHHHcCCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccc
Confidence 5666666678999999999999878999999999999999999999999999999999999999999876432 12223
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++.....+.+..+++.+++....|++.|++||++||+|||++++|++.+|++|.+|+++|+|++||+|++++++||++..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~ 216 (395)
T 4e1l_A 137 MGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIET 216 (395)
T ss_dssp SCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEE
T ss_pred cCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceE
Confidence 33333444444566677776778999999999999999999999999999999999999999999999999988887778
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+++|+++|+|++.+++|+|++ +||+|++|||+++|||+++||++++.|++++.+|+++|.|++...++|..++.+
T Consensus 217 ~~~d~~~r~~~t~e~l~~~~~v~~~-~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~ 295 (395)
T 4e1l_A 217 IDKDEYPKLGMTFEGLSKLKPAFKK-DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTG 295 (395)
T ss_dssp ECSCSCCCTTCCHHHHHHCCBSSST-TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCT
T ss_pred ECCccccCCCCCHHHHhhCCCccCC-CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHH
Confidence 9999999999999999999999965 489999999999999999999999999999999999999999998899888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||++|+||+|+.+.+.+.|.||++++|+|++||++++|||+|+||+++++++++||++ ++
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~~ 375 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVE 375 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 376 ~gl~~~----------------c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 376 TGLATL----------------CIGGGQGISMVVSR 395 (395)
T ss_dssp EEEEEE----------------ESSTTEEEEEEEEC
T ss_pred EEEEEE----------------ccCCCceEEEEEeC
Confidence 999998 99999999999983
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-56 Score=497.83 Aligned_cols=324 Identities=35% Similarity=0.535 Sum_probs=284.1
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+...+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|++|+.|+...+. +.
T Consensus 67 g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~---~~ 143 (393)
T 1afw_A 67 GNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPL---GM 143 (393)
T ss_dssp ECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTT---CS
T ss_pred EecCCCCCCChHHHHHHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCccccccc---cc
Confidence 344443345689999999999977899999999999999999999999999999999999999998766532110 00
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeec
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~ 161 (814)
.....+...++ .+.....|++.+++||++||+|||+||+|++++|+||.+|+++|+|++||+|+++++ |+ .++
T Consensus 144 --~~~~~~~~~g~-~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~--~~~ 216 (393)
T 1afw_A 144 --ISSEELQKNRE-AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS--ICQ 216 (393)
T ss_dssp --CCCHHHHHCTT-GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC--EEC
T ss_pred --ccchhhhhccc-ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc--eec
Confidence 00000111233 222335699999999999999999999999999999999999999999999998765 32 789
Q ss_pred cCCccccCCCHHhhhcCCceeccCC-CccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 162 NEDEEYKKINFEKFKSLATVFQKEN-GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 162 ~d~~~r~~~t~e~~~~~~~~~~~~~-~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
+|+.+|+++|+|++.++||+|++ + ||+|++|||+++|||+++||+|+++|++++.+|+++|+|++.++++|..++.++
T Consensus 217 ~d~~~r~~~t~e~~~~~rpvf~~-~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~ 295 (393)
T 1afw_A 217 SDEGPRPNVTAESLSSIRPAFIK-DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGP 295 (393)
T ss_dssp SCSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHH
T ss_pred cccccCCCCCHHHHhcCCCcccC-CCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhH
Confidence 99999999999999999999954 3 799999999999999999999999999999999999999999998888888899
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc-CCCC
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-GQKG 319 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-g~~g 319 (814)
..+++++|+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+|++|+++++++++|||+ +. |
T Consensus 296 ~~a~~~al~~Agl~~~dId~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~-g 374 (393)
T 1afw_A 296 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI-G 374 (393)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE-E
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 44 8
Q ss_pred CccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 320 QLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 320 l~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++++ |+|||+|.+++||.
T Consensus 375 l~~~----------------c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 375 VVSM----------------CIGTGMGAAAIFIK 392 (393)
T ss_dssp EEEE----------------EETTTEEEEEEEEE
T ss_pred EEEE----------------eecccceEEEEEEe
Confidence 8887 99999999999984
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-56 Score=500.15 Aligned_cols=320 Identities=33% Similarity=0.533 Sum_probs=283.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
+++++++++..+|++..+|+++|+++|+|++.||.+|+++|++|++|+|||+|+|++|..|+.... ...+.+
T Consensus 92 ~~~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~--------~~~~~~ 163 (442)
T 2wu9_A 92 RASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG--------SVNPAV 163 (442)
T ss_dssp HHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS--------CCCGGG
T ss_pred CChHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc--------ccchhh
Confidence 357899999999997789999999999999999999999999999999999999999987753210 000111
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeec--CCC---CCceeeccCC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIP--QRK---GKADIIVNED 164 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~--~~~---~~~~~~~~d~ 164 (814)
..+++ +++....|++.|++||++||+|||+||+||+.+|+||..||++|+|++||+|++++ ++| +....+++||
T Consensus 164 ~~~~~-~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De 242 (442)
T 2wu9_A 164 KKFAQ-AQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDD 242 (442)
T ss_dssp GGCHH-HHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCT
T ss_pred hhccc-cccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeeccc
Confidence 11122 23334579999999999999999999999999999999999999999999999874 221 0124689999
Q ss_pred ccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHHHHH
Q psy12877 165 EEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAI 244 (814)
Q Consensus 165 ~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~~a~ 244 (814)
.+|+++|+|++.++||+|++ +||+|++|||+++|||+||||+|+++|++++.+|+++|+|++.++++|..++.++..++
T Consensus 243 ~~r~~~t~e~~~~~rpvfd~-~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~ 321 (442)
T 2wu9_A 243 GIRPTTTLASLGKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAI 321 (442)
T ss_dssp TCCTTCCHHHHHTSCCSSCT-TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHH
T ss_pred CcCCCCCHHHHhcCCCccCC-CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHH
Confidence 99999999999999999965 58999999999999999999999999999999999999999999988888888999999
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc-C---CCCC
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-G---QKGQ 320 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-g---~~gl 320 (814)
+++|+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+|+||+++++++++|||+ + ++||
T Consensus 322 ~~Al~~AGl~~~DId~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~gl 401 (442)
T 2wu9_A 322 PAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGV 401 (442)
T ss_dssp HHHHHHTTCCGGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHcCCCHHHCCEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997 4 5677
Q ss_pred ccccccCccccccccceeEEecCCcceeEEEecCc
Q psy12877 321 LSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
+++ |+|||++.+++||...
T Consensus 402 as~----------------~~GGG~~~a~v~~~~~ 420 (442)
T 2wu9_A 402 VSM----------------CIGTGMGAAAVFERGD 420 (442)
T ss_dssp EEE----------------EETTTEEEEEEEEECS
T ss_pred EEe----------------ecccchheEEEEEecc
Confidence 776 9999999999999753
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-55 Score=491.65 Aligned_cols=335 Identities=64% Similarity=0.977 Sum_probs=294.0
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++..|+...+....++
T Consensus 60 g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~ 139 (395)
T 2ib8_A 60 GNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYG 139 (395)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTT
T ss_pred EeccCCCCCchHHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccc
Confidence 55555556789999999999997789999999999999999999999999999999999999999987763222111111
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeec
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~ 161 (814)
.....+...++.+.+++....|++.|++|+++||+|||+++++|+++|+||.+|+++++|++||+|+++++++....+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~ 219 (395)
T 2ib8_A 140 GVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVK 219 (395)
T ss_dssp CEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEEC
T ss_pred cccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeec
Confidence 11111111233444555566799999999999999999999999999999999999999999999999876532235688
Q ss_pred cCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHH
Q psy12877 162 NEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 241 (814)
Q Consensus 162 ~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~ 241 (814)
+||.+| +++.|++.++||+|++++||+|++|||+++|||+++||+|+++|++++.+|+++|+|++....+|..++.++.
T Consensus 220 ~D~~~r-~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~ 298 (395)
T 2ib8_A 220 EDEEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPV 298 (395)
T ss_dssp SCSGGG-SCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHH
T ss_pred cccccc-cCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHH
Confidence 999999 5899999999999976679999999999999999999999999999999999999999998778877778889
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcCCCCCc
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQL 321 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g~~gl~ 321 (814)
.+++++|+++|++++|||++|+||+|+++++.++|+||++++|+|++||++++|||+|+||+++++++++|||++++|++
T Consensus 299 ~a~~~al~~Agl~~~dId~ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~gl~ 378 (395)
T 2ib8_A 299 YAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQGEYGLA 378 (395)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHcCCCHHHcCEEEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998778888
Q ss_pred cccccCccccccccceeEEecCCcceeEEEec
Q psy12877 322 SQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++ |+|||+|.+++||.
T Consensus 379 ~~----------------~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 379 SI----------------CNGGGGASAMLIQK 394 (395)
T ss_dssp EE----------------EETTTEEEEEEEEE
T ss_pred EE----------------ecccCHhheEEEEc
Confidence 87 99999999999984
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-55 Score=490.88 Aligned_cols=326 Identities=35% Similarity=0.531 Sum_probs=283.4
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+...+++++|+++..+|++..+|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+|+.|+.... ...
T Consensus 83 g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~---~~~ 159 (418)
T 2iik_A 83 GNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG---NIT 159 (418)
T ss_dssp ECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC--------CCC
T ss_pred EecCCccccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc---ccc
Confidence 44444333568999999999997789999999999999999999999999999999999999999987753210 000
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeec--CCCCC--c
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIP--QRKGK--A 157 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~--~~~~~--~ 157 (814)
..+.. .+.+.++ ...|++.++++|++||+|||+||+||+++|+||..|+.+++|++||+|+++. +++|+ .
T Consensus 160 -~~~~~---~~~~~~~--~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~ 233 (418)
T 2iik_A 160 -SRLME---KEKARDC--LIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRS 233 (418)
T ss_dssp -TTGGG---CHHHHGG--GSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEE
T ss_pred -hhhhc---ccccccc--cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccc
Confidence 00000 0111111 1458999999999999999999999999999999999999999999999764 33332 2
Q ss_pred eeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC
Q psy12877 158 DIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237 (814)
Q Consensus 158 ~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~ 237 (814)
..+++|+.+|+++|+|+++++||+|++. +|+|++|||+++|||+|+||+|+++|++++.+|+++|.|++..+.+|..++
T Consensus 234 ~~~~~d~~~rp~~t~e~l~~~~~vfd~~-~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~ 312 (418)
T 2iik_A 234 ITVTQDEGIRPSTTMEGLAKLKPAFKKD-GSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMG 312 (418)
T ss_dssp EEECSCTTCCTTCCHHHHHHCCCSSSTT-CCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGG
T ss_pred eeeecccCcCCCCCHHHHhhCCCcccCC-CceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcc
Confidence 4688999999999999999999999653 799999999999999999999999999999999999999999888888888
Q ss_pred CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 238 ~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
.++..+++++|+++||+++|||+||+||+|+.+++.++|+||++++|+|++||++++|||+|+||+++++++++|||+
T Consensus 313 ~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~ 392 (418)
T 2iik_A 313 IGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 392 (418)
T ss_dssp GHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHHHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQ-KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~-~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++ +|++++ |+|||+|.+++||.
T Consensus 393 ~~~~gl~~~----------------c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 393 KRAYGVVSM----------------CIGTGMGAAAVFEY 415 (418)
T ss_dssp SCEEEEEEE----------------EETTTEEEEEEEEE
T ss_pred CCeeeEEEE----------------eeccchhheEEEec
Confidence 55 899998 99999999999985
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-54 Score=485.57 Aligned_cols=323 Identities=33% Similarity=0.511 Sum_probs=269.0
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++|+++..+|+|..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|+||+.|+..... .+
T Consensus 61 g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~--~~ 138 (407)
T 3svk_A 61 GVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGG--AW 138 (407)
T ss_dssp ECC--------CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------C
T ss_pred EecCccccccCcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccc--cc
Confidence 55555443 6789999999999987999999999999999999999999999999999999999999988643211 11
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
. .+. .+..++....|++.|++++++||++||+||+|++.+|++|..+.++|+|.+||+|+..+ +| ...+
T Consensus 139 ~----~~~----~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~--~g-~~~~ 207 (407)
T 3svk_A 139 A----TDP----ETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQ--NG-LVIL 207 (407)
T ss_dssp C----CCT----TTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECT--TS-CEEE
T ss_pred c----cCc----hhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecC--CC-ceee
Confidence 0 010 11122233569999999999999999999999999999999999999999999999843 33 2468
Q ss_pred ccCCccccCCCHHhhhcCCceeccC--------------------CCccccCCCCCcCceeeEEEEcCHHHHHHcCCCcc
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKE--------------------NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPL 220 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~--------------------~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~ 220 (814)
++|+.+|+++|+|+++++||+|++. .+|+|++|||+++|||+++||+|+++|++++.+|+
T Consensus 208 ~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~ 287 (407)
T 3svk_A 208 DHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPR 287 (407)
T ss_dssp CSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCC
T ss_pred CCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCc
Confidence 9999999999999999999999532 23459999999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCC
Q psy12877 221 ARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300 (814)
Q Consensus 221 a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~ga 300 (814)
++|.|++..+++|..++.++..+++++|+++||+++|||++|+||+|+.+++.++|.||++++|+|++||++++|||+|+
T Consensus 288 a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~ga 367 (407)
T 3svk_A 288 ARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGA 367 (407)
T ss_dssp EEEEEEEEC------CCCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGG
T ss_pred EEEEEEEEeccCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 301 SGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 301 sG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
||+++++++++|||+ +++|++++ |+|||+|.+++||.
T Consensus 368 sG~~~~~~~~~~L~~~~~~~gl~~~----------------c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 368 TGAMITGTMVDELERRNARRALITL----------------CIGGGMGVATIIER 406 (407)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEE----------------ECSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEe----------------eccCcceEEEEEEc
Confidence 999999999999998 78999998 99999999999984
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-54 Score=481.10 Aligned_cols=325 Identities=30% Similarity=0.452 Sum_probs=288.1
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++++++..+|++..+|+++++++|+|++.||.+|+++|++|++|+|||+|+|.+|..|+.... +
T Consensus 59 g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~----~ 134 (390)
T 1wdk_C 59 GCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV----D 134 (390)
T ss_dssp ECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB----C
T ss_pred EeeccccCCCCcHHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc----c
Confidence 44444433 578999999999998789999999999999999999999999999999999999999987753211 1
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
.... +..++ +.....|++.|++||++||+|||++|+|++++|+||..|+++|+|.+||+|++.+.+++....+
T Consensus 135 ~~~~----~~~~~---~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~f 207 (390)
T 1wdk_C 135 PNPH----MSLYA---AKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIF 207 (390)
T ss_dssp CCGG----GGGTS---CGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEE
T ss_pred cCcc----ccccC---CcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceee
Confidence 0000 00111 1112458999999999999999999999999999999999999999999999887666544578
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++||++|+++|+|+++++||+|+.++|++|++|||+++|||+||||+|+++|++++.+|+++|+|++.++++|..++.++
T Consensus 208 d~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~ 287 (390)
T 1wdk_C 208 DYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGP 287 (390)
T ss_dssp CSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTH
T ss_pred ccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhH
Confidence 99999999999999999999994425779999999999999999999999999999999999999999988888788899
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCC---CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDID---PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~---~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
..+++++|+++|++++|||+||+||+|+++++.++|.||++ ..|+|++||++++|||+|++|+++++++++|||+
T Consensus 288 ~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~ 367 (390)
T 1wdk_C 288 VPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNG 367 (390)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCChhhCcEEEeccCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999 6799999999999999999999999999999998
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++|++++ |+|||++.+++||.
T Consensus 368 ~~~gl~~~----------------~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 368 GTFGLSTM----------------CIGLGQGIATVFER 389 (390)
T ss_dssp CSEEEEEE----------------EETTTEEEEEEEEC
T ss_pred CCEEEEEe----------------cccchheEEEEEEe
Confidence 67899987 99999999999984
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-47 Score=423.69 Aligned_cols=311 Identities=40% Similarity=0.621 Sum_probs=274.5
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
.|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...+++.++.++..+|++...
T Consensus 5 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~ 84 (396)
T 4dd5_A 5 NMREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEK 84 (396)
T ss_dssp -CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS
T ss_pred cCCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCc
Confidence 36789999999999999988889999999999999999999999999999999999887767788999999999998778
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
|.++++.+|+|++.+|..|+++|++|.+|+||++|+|+|++.|+... ++....+.....+.+..+++.+++....|++
T Consensus 85 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (396)
T 4dd5_A 85 PAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGI 164 (396)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHH
T ss_pred eEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHH
Confidence 99999999999999999999999999999999999999999886532 2222222222333334455566666678999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
.|++||++||+|||+||+|+++||+||.++...++|++||+|++++++++. .+++.|+.+| ++|+|+|.++||+|.+
T Consensus 165 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~l~~~~~v~~p 242 (396)
T 4dd5_A 165 TAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGD--TVVDKDEYIKPGTTMEKLAKLRPAFKK 242 (396)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----C--EEECSCSCCCTTCCHHHHHHCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCc--eeecCcccccCCCCHHHHhhCCCccCC
Confidence 999999999999999999999999999997778999999999999887763 5689999998 6999999999999985
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+|+|++|||+++|||++|||++++.|++++.+|+++|+|++..+++|..++.++..+++++|+++|+ .+||+|.|
T Consensus 243 -~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve 319 (396)
T 4dd5_A 243 -DGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVE 319 (396)
T ss_dssp -TCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred -CCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 68999999999999999999999999999999999999999998889998888999999999999999 68999998
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=421.81 Aligned_cols=313 Identities=62% Similarity=0.946 Sum_probs=273.8
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
.+++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++.++.++..+|++...
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 35789999999999999988888999999999999999999999999999999999877666788999999999997678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
|.++++++|+||+.||..|+++|++|++|++|++|+|+++..|....+....++.....+...+..+.+++...+|++.|
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a 165 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCA 165 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHH
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHH
Confidence 99999999999999999999999999999999999999988775322211111110111111233444555667899999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENG 615 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~ 615 (814)
++|+++||+|||++++++++||+||.++++.++|++||+|++++++ .+|..++++|+.+|++++|+|.++||+|.+.++
T Consensus 166 ~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g 244 (395)
T 2ib8_A 166 ENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-GQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENG 244 (395)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-TSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-CCcceeeccccccccCCHHHHhcCCccccCCCC
Confidence 9999999999999999999999999998888999999999999887 455567899999999999999999999975579
Q ss_pred ccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 616 plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
|+|++|||+++|||++|||+|++.|+++|.+|+++|+|++..+.+|..++.++..|++++|+++|+ .+||+|.|
T Consensus 245 ~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie 319 (395)
T 2ib8_A 245 TVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWE 319 (395)
T ss_dssp CCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred CcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEE
Confidence 999999999999999999999999999999999999999988888888888899999999999999 58999998
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=419.34 Aligned_cols=311 Identities=40% Similarity=0.600 Sum_probs=268.5
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
+++|+|||++||||+++.|.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...++.+++.++..+|++...|
T Consensus 5 ~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 84 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP 84 (397)
T ss_dssp CSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc
Confidence 46899999999999999999999999999999999999999999999999999998776556789999999999976789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC-CCccCCCCccccccccccccccccccccHHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
.++++++|+||+.||..|+++|++|++|+||++|+|+|+..|.... ++....+.....+.....++..++....|++++
T Consensus 85 ~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a 164 (397)
T 1wl4_A 85 AWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITA 164 (397)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHH
T ss_pred EEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHH
Confidence 9999999999999999999999999999999999999998775322 111111110001111112233333346799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccC-
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE- 613 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~- 613 (814)
++||++||+|||+||+|+++||+||.++.+.++|++||+|++++++++. +++++|+.+| ++|+|++.++||+|++.
T Consensus 165 ~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rpvfd~~~ 242 (397)
T 1wl4_A 165 ENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYFLTDG 242 (397)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHTSCCSSCCSS
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCCC
Confidence 9999999999999999999999999997789999999999998766553 5678899887 79999999999999753
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|++|++|||+++|||++|||+|++.|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+|.|
T Consensus 243 ~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie 319 (397)
T 1wl4_A 243 TGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFE 319 (397)
T ss_dssp CCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEE
Confidence 38999999999999999999999999999999999999999999988988888999999999999999 68999998
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=420.21 Aligned_cols=310 Identities=33% Similarity=0.532 Sum_probs=263.8
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... +++.++.++..+|++...
T Consensus 1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 3679999999999999988888999999999999999999999999999999998876544 578899999999997678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC--CccCCCCccccccc----cccccc-ccccc
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR--GETKYGGMNLIDGI----VYDGLS-DVYNK 528 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~--~~~~~~~~~~~~~~----~~~~~~-~~~~~ 528 (814)
|+++++++|+||+.||..|+++|++|++|+||++|+|+|++.|+.... .....+.....+.. ...++. +.+..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 999999999999999999999999999999999999999987753221 11111100000000 011221 11224
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccc
Q psy12877 529 IHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLA 607 (814)
Q Consensus 529 ~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~ 607 (814)
..|++.|++||++||+|||+||+|+++||+||.++...++|++||+|++++++++. +++++|+.+| ++|+|++.++|
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~r 238 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALR 238 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCc--eeeccccccCCCCCHHHHhhCC
Confidence 56999999999999999999999999999999984345699999999998776653 6789999998 79999999999
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
|+|++ +||+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+
T Consensus 239 pif~~-~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 317 (401)
T 1ulq_A 239 PVFRE-GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLG 317 (401)
T ss_dssp BSSST-TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCS
T ss_pred CccCC-CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcC
Confidence 99975 68999999999999999999999999999999999999999999999988889999999999999999 68999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|.|
T Consensus 318 ~ie 320 (401)
T 1ulq_A 318 LIE 320 (401)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=416.50 Aligned_cols=309 Identities=35% Similarity=0.546 Sum_probs=274.6
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...+++.++.++..+|++...|
T Consensus 4 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p 83 (394)
T 3ss6_A 4 MHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVT 83 (394)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCE
T ss_pred CceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCce
Confidence 67899999999999999888889999999999999999999999999999999998776667789999999999987789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+++++++|+|++.+|+.|+++|++|++|++|++|+|+|++.|+... ++....+.....+... +.+.+++....|++.
T Consensus 84 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 162 (394)
T 3ss6_A 84 GYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGET 162 (394)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHHHH
T ss_pred EEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc-cccccccccchHHHH
Confidence 9999999999999999999999999999999999999998876432 1222222222222221 444556667789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE 613 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~ 613 (814)
|++||++||+|||+||+|+++||+||.++...++|++||+|++++++++. .+++.|+.+| ++|+|++.++||+|++
T Consensus 163 a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~--~~~~~d~~~R~~~t~e~~~~~~pvf~~- 239 (394)
T 3ss6_A 163 AENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHPRADITAEKLAGLKPAFRK- 239 (394)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE--EEECSCCCCCTTCCHHHHHTCCBSSST-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc--eeecccccccCCCCHHHHhhCCCccCC-
Confidence 99999999999999999999999999996667999999999999887764 4678999998 7999999999999986
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+++|++|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++|+ .+|++|.|
T Consensus 240 ~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve 316 (394)
T 3ss6_A 240 DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLE 316 (394)
T ss_dssp TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 68999999999999999999999999999999999999999998889988888999999999999999 68999998
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=417.67 Aligned_cols=311 Identities=42% Similarity=0.666 Sum_probs=275.0
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...++++++.++..+|++...|
T Consensus 4 m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p 83 (395)
T 4e1l_A 4 MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP 83 (395)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSC
T ss_pred CCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCce
Confidence 67899999999999999888999999999999999999999999999999999998877677889999999999987789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+++++++|+|++.+|+.|+++|++|.+|+||++|+|+|++.|+... ++....+.....+.+..+.+.+++....|++.
T Consensus 84 ~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 163 (395)
T 4e1l_A 84 SYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGIT 163 (395)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHH
T ss_pred EEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHH
Confidence 9999999999999999999999999999999999999998775331 11111222222333344555666666789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE 613 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~ 613 (814)
|++||++||+|||++|+|+++||+||.++...++|++||+|++++++++.+ ++++.|+.+| ++|+|++.++||+|.+
T Consensus 164 a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~-~~~~~d~~~r~~~t~e~l~~~~~v~~~- 241 (395)
T 4e1l_A 164 AENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK- 241 (395)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEE-EEECSCSCCCTTCCHHHHHHCCBSSST-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcc-eEECCccccCCCCCHHHHhhCCCccCC-
Confidence 999999999999999999999999999977789999999999998777653 4578899998 7999999999999986
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+|+|++|||+++|||+++||++++.|++++.+|+++|.|++..+++|..++.++..+++++|+++|+ .+||+|.|
T Consensus 242 ~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 318 (395)
T 4e1l_A 242 DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIE 318 (395)
T ss_dssp TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 79999999999999999999999999999999999999999999899999999999999999999999 68999998
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=412.30 Aligned_cols=301 Identities=30% Similarity=0.396 Sum_probs=266.6
Q ss_pred CCceeEeceeecccccCC-CCCCCCCHHHHHHHHHHHHHHHc-CCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~-g~~~~~~~~eLa~~A~~~AL~dA-Gl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~ 453 (814)
|++|+|||++||||+++. |.+++.++.+|+.+|+++||+|+ |+++++||.+++|++.+... +++.++.++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 568999999999999987 89999999999999999999999 99999999999999877665 7789999999999987
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
..|+++++++|+|++.+|+.|+++|++|++|++|++|+|+|++.|+... .+ . .+ .++.+.+++ ...|++
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~-----~~---~-~~-~~~~~~~~~-~~~~g~ 149 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHG-----VD---F-HP-GLSRNVAKA-AGMMGL 149 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTT-----BC---C-CT-TCC--------CCCHH
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccc-----cC---c-Cc-ccccccccc-cccHHH
Confidence 7899999999999999999999999999999999999999998876411 11 0 01 122333333 567999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
.|++||++||+|||+||+|+++||+||.++...++|+++|+|+++++++++. ..++.|+.+| ++|+|+|.++||+|.+
T Consensus 150 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~-~~~~~d~~~r~~~t~e~l~~~~p~f~~ 228 (387)
T 3goa_A 150 TAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALSTLRPAFDP 228 (387)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCE-EEECSCTTCCTTCCHHHHTTSCCSSCT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcc-cccccccccCCCCCHHHHhcCCCcccC
Confidence 9999999999999999999999999999966677999999999998877653 4579999998 6999999999999974
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+.+++|++|||+++|||+++||+|++.|+++|.+|+++|+|++..+++|..++.++..+++++|+++|+ .+|++|.|
T Consensus 229 ~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve 306 (387)
T 3goa_A 229 VSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFE 306 (387)
T ss_dssp TTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 357899999999999999999999999999999999999999999999999999999999999999999 68999998
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=412.58 Aligned_cols=310 Identities=38% Similarity=0.626 Sum_probs=266.3
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.|.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...++++++.++..+|++...|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 57899999999999999999999999999999999999999999999999999998776667789999999999985589
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccc-cCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY-LNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
.++++++|+||+.||..|+++|++|++|+||++|+|+|+..|+. ..+.....+.....+.....++..++....|+++|
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 161 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTA 161 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHH
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHH
Confidence 99999999999999999999999999999999999999887652 00111111100001111112233333445799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
++||++||+|||++|+|+++||+||.++...++|++||+|+++++++++ ..+++|+.+| ++|+|++.++||+|.+ +
T Consensus 162 ~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~--~~f~~d~~~r~~~t~e~~~~~~~v~~~-~ 238 (392)
T 2vu1_A 162 ENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDK-E 238 (392)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCC--EEECSCSSCCTTCCHHHHHTCCCSSCT-T
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCC-C
Confidence 9999999999999999999999999994445799999999998776664 3679999998 7999999999999964 6
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+++|++|||+++|||+++||+|+++|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+|.|
T Consensus 239 g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie 314 (392)
T 2vu1_A 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVE 314 (392)
T ss_dssp CCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence 9999999999999999999999999999999999999999999988988888999999999999999 68999998
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=411.14 Aligned_cols=306 Identities=30% Similarity=0.442 Sum_probs=263.0
Q ss_pred cccCCCCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcC----CCCcCcceEEEEecccCCCCChHHHHHH
Q psy12877 372 NFASKPGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKAN----MDKSDVQEVYMGNVCQAGLGQAPCRQAV 446 (814)
Q Consensus 372 ~~~~~~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAG----l~~~dID~vivG~~~~~~~~~~~a~~~a 446 (814)
.+.+.|++|+|||++||||+++ .|.+++.++.+|+.+|+++||+|+| +++++||.+++|+..+...++++++.++
T Consensus 4 ~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va 83 (393)
T 1afw_A 4 LLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAAC 83 (393)
T ss_dssp TTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHH
T ss_pred hhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHH
Confidence 3456678999999999999998 5899999999999999999999999 9999999999998876555567899999
Q ss_pred HHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccc
Q psy12877 447 IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVY 526 (814)
Q Consensus 447 ~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (814)
..+|++...|+++++++|+||+.||..|+++|++|++|++|++|+|+|++.|+...+. +. ...+.+...++ .+.
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~---~~--~~~~~~~~~g~-~~~ 157 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPL---GM--ISSEELQKNRE-AKK 157 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTT---CS--CCCHHHHHCTT-GGG
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCccccccc---cc--ccchhhhhccc-ccc
Confidence 9999976789999999999999999999999999999999999999998766532110 00 00000111122 222
Q ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhc
Q psy12877 527 NKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKS 605 (814)
Q Consensus 527 ~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~ 605 (814)
....|+++|++||++||+|||+||+|+++||+||.++...++|++||+|+++++ +. ++++|+.+| ++|+|++.+
T Consensus 158 ~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~---~~~~d~~~r~~~t~e~~~~ 232 (393)
T 1afw_A 158 CLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS---ICQSDEGPRPNVTAESLSS 232 (393)
T ss_dssp GGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC---EECSCSSCCSCCCHHHHHH
T ss_pred cchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc---eeccccccCCCCCHHHHhc
Confidence 335799999999999999999999999999999998445679999999998765 32 579999988 799999999
Q ss_pred cccccccCC-CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cc
Q psy12877 606 LATVFQKEN-GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 606 ~~p~f~~~~-~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~s 683 (814)
+||+|++ . ||+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+
T Consensus 233 ~rpvf~~-~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~ 311 (393)
T 1afw_A 233 IRPAFIK-DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQ 311 (393)
T ss_dssp CCBSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred CCCcccC-CCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHH
Confidence 9999974 4 7999999999999999999999999999999999999999999999988888999999999999999 68
Q ss_pred ceeEeh
Q psy12877 684 QFWYDE 689 (814)
Q Consensus 684 q~~y~e 689 (814)
||+|.|
T Consensus 312 dId~ve 317 (393)
T 1afw_A 312 DIDIFE 317 (393)
T ss_dssp GCSEEE
T ss_pred HCCEEE
Confidence 999998
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=415.48 Aligned_cols=303 Identities=30% Similarity=0.469 Sum_probs=260.2
Q ss_pred CCCceeEeceeecccccCC-CCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCC-CCChHHHHHHHHcCCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG-LGQAPCRQAVIFAGLPK 453 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~-g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~-~~~~~a~~~a~~~Gl~~ 453 (814)
.|++|||||++||||+++. |.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+.. .++++++.++..+|++.
T Consensus 28 ~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 107 (442)
T 2wu9_A 28 YGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 107 (442)
T ss_dssp GGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCT
T ss_pred cCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCC
Confidence 3578999999999999985 889999999999999999999999999999999999875432 13467889999999976
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
..|+++++++|+||+.||..|+++|++|++|+||++|+|+|+..|+.... . ..+....+++ .++....|++
T Consensus 108 ~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~---~-----~~~~~~~~~~-~~~~~~~mg~ 178 (442)
T 2wu9_A 108 TVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG---S-----VNPAVKKFAQ-AQNCLLPMGV 178 (442)
T ss_dssp TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS---C-----CCGGGGGCHH-HHHTTSCHHH
T ss_pred CceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc---c-----cchhhhhccc-cccchhHHHH
Confidence 78999999999999999999999999999999999999999987652110 0 0011111111 2333457999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhc-CCccccccceecc--CCC-C-CcceEeccCCccc-cCCHHHhhccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKN-NVFSSQIVPVSIP--QRK-G-KADIIVNEDEEYK-KINFEKFKSLA 607 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~-a~~~~ei~p~t~~--~~~-~-s~~i~~~~D~~~~-~~~~e~l~~~~ 607 (814)
+|++||++||+|||+||+|+++||+||.. ||. ++|++||+|++++ +.+ + ...+++++||.+| ++|+|+|.++|
T Consensus 179 ~A~~~~~~~gisre~~~~~A~~s~~~A~~-~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~r 257 (442)
T 2wu9_A 179 TSENVAQRFGVSRQEQDQAAVDSHRKAAA-ATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLK 257 (442)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHH-HHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHh-ChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCC
Confidence 99999999999999999999999999998 774 6999999999874 211 0 0125789999998 79999999999
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
|+|++ +||+|++|||+++|||++|||+|++.|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+
T Consensus 258 pvfd~-~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 258 PVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp CSSCT-TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred CccCC-CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 99975 69999999999999999999999999999999999999999999999988889999999999999999 68999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|+|
T Consensus 337 ~iE 339 (442)
T 2wu9_A 337 LFE 339 (442)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=394.54 Aligned_cols=300 Identities=30% Similarity=0.440 Sum_probs=242.3
Q ss_pred CCCceeEeceeeccccc-CCCCCCCCCHHHHHHHHHHHHHHH-cCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCC
Q psy12877 376 KPGDVFIVSGSRTPMGS-FRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLP 452 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~-~~g~~~~~~~~eLa~~A~~~AL~d-AGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~ 452 (814)
++++|+|||++||||+| +.|.+++.++.+|+.+|+++||+| +|+++++||.+++|++.+... ++++++.++..+|+|
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 35789999999999995 788899999999999999999999 999999999999998876543 678999999999998
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
...|+++++++|+||+.+|..|+++|++|++|+||++|+|+|++.|+..... .+ ..+. .+..++...+||
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~--~~----~~~~----~~~~~~~~~~~g 154 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGG--AW----ATDP----ETNYRIGFVPQG 154 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------C----CCCT----TTCCCCCCHHHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccc--cc----ccCc----hhhccccccCHH
Confidence 7899999999999999999999999999999999999999999887643211 00 0000 011123335799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~ 611 (814)
+.|++++++||++||++|+|++.||++|..+..++.|++||+|++.+ ++ ...++.|+.+| ++|+|++.++||+|.
T Consensus 155 ~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~--~g--~~~~~pd~~~r~~~t~e~l~~~~~vf~ 230 (407)
T 3svk_A 155 IGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQ--NG--LVILDHDEHMRPDTTMEGLAKLKTAFD 230 (407)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECT--TS--CEEECSCTTCCTTCCHHHHHTSCBSCC
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecC--CC--ceeeCCccccCCCCCHHHHhhCCCeec
Confidence 99999999999999999999999999999999999999999999743 23 23578899998 799999999999996
Q ss_pred cC--------------------CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhH
Q psy12877 612 KE--------------------NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 671 (814)
Q Consensus 612 ~~--------------------~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A 671 (814)
+. .+|+|++|||+++|||+++||+|++.|+++|.+|+++|+|++..+++|..++.++..|
T Consensus 231 ~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a 310 (407)
T 3svk_A 231 GVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPA 310 (407)
T ss_dssp -------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHH
T ss_pred CCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHH
Confidence 41 2356999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC-CcceeEeh
Q psy12877 672 IPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 672 ~~~~~~~~~~-~sq~~y~e 689 (814)
++++|+++|+ .+||+|.|
T Consensus 311 ~~~al~~Agl~~~dId~~e 329 (407)
T 3svk_A 311 TRKVLDRAGLTIDDIDLFE 329 (407)
T ss_dssp HHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHcCCCHHHCCEEE
Confidence 9999999999 68999997
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=396.10 Aligned_cols=301 Identities=30% Similarity=0.462 Sum_probs=256.3
Q ss_pred CCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
+++|+|||++||||+++ .+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++.++.++..+|++...
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~ 108 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV 108 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence 57899999999999985 46788899999999999999999999999999999998766544557888888999997678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccc-ccccccccccccHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV-YDGLSDVYNKIHMGNC 534 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~mg~~ 534 (814)
|+++++++|+||+.||..|+++|++|++|+||++|+|+|++.|+.... .. .+.+. .+...+ ....|++.
T Consensus 109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~---~~-----~~~~~~~~~~~~--~~~~~g~~ 178 (418)
T 2iik_A 109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG---NI-----TSRLMEKEKARD--CLIPMGIT 178 (418)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC--------CC-----CTTGGGCHHHHG--GGSCHHHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc---cc-----chhhhccccccc--ccccHHHH
Confidence 999999999999999999999999999999999999999987652110 00 00000 000111 12468999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhh-cCCccccccceecc--CCCCC-cceEeccCCccc-cCCHHHhhccccc
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYK-NNVFSSQIVPVSIP--QRKGK-ADIIVNEDEEYK-KINFEKFKSLATV 609 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p-~a~~~~ei~p~t~~--~~~~s-~~i~~~~D~~~~-~~~~e~l~~~~p~ 609 (814)
++++|++||+|||+||+||++||+||.. || .++|+++|+|+++. +.++. +.+++++|+.+| .+|+|+|+++||+
T Consensus 179 a~~~a~~~gitre~~~~~a~~s~~~A~~-a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~v 257 (418)
T 2iik_A 179 SENVAERFGISREKQDTFALASQQKAAR-AQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPA 257 (418)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHH-HHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCS
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHh-ChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCc
Confidence 9999999999999999999999999998 66 69999999999763 22221 135688999998 6999999999999
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEe
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYD 688 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~ 688 (814)
|++ .+|+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+.+|..++.++..|++++|+++|+ .+||+|+
T Consensus 258 fd~-~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~v 336 (418)
T 2iik_A 258 FKK-DGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336 (418)
T ss_dssp SST-TCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccC-CCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCee
Confidence 986 57999999999999999999999999999999999999999998888988888999999999999999 6899999
Q ss_pred h
Q psy12877 689 E 689 (814)
Q Consensus 689 e 689 (814)
|
T Consensus 337 E 337 (418)
T 2iik_A 337 E 337 (418)
T ss_dssp E
T ss_pred e
Confidence 8
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=420.61 Aligned_cols=304 Identities=12% Similarity=0.067 Sum_probs=232.1
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+.|++++++..+|++ ..|.++++.+|+|++++|++|+++|++|++|+||++|+|+||+.|+...... +.+.....+
T Consensus 89 ~~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~-~~~~~~~~~- 165 (520)
T 4egv_A 89 VSSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAEN-KPDHSETVD- 165 (520)
T ss_dssp --CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC---------------------
T ss_pred cccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccccccccccc-ccCcccccc-
Confidence 3578999999999998 6899999999999999999999999999999999999999999887543211 000000000
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.........|+..++++..+||+++++++.++..+|+++..+...+.|+++|.|+.++.++ ....++|+.+|+
T Consensus 166 -----~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~--~a~~np~a~~r~ 238 (520)
T 4egv_A 166 -----GQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSK--VAAKNPYSSAPT 238 (520)
T ss_dssp --------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH--HHHHCTTSSSCC
T ss_pred -----ccccccccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccc--ccccCccccccC
Confidence 0011122345666777777888888888888888887777776666777777777665443 124578889999
Q ss_pred CCCHHhhhcCCceeccC-CCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC--------CCc
Q psy12877 169 KINFEKFKSLATVFQKE-NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF--------PIA 239 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~-~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~--------~~~ 239 (814)
++|+|++.+++|.++.- ++..|++|||+++|||+|+||+|+++|+++|++|+++|.+++....+|..+ ..+
T Consensus 239 ~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~ 318 (520)
T 4egv_A 239 ERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPA 318 (520)
T ss_dssp CCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHH
T ss_pred CCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChH
Confidence 99999999877766432 244578999999999999999999999999999999999998877655444 335
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC---CcccCCCCccccCCCCChHHHHHHHHHHHHHc-
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS- 315 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~- 315 (814)
+..+++++|+++||+++|||+||+||||++++++++|+||||++ |+|++||++++|||++++|++.++++++|||+
T Consensus 319 ~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~ 398 (520)
T 4egv_A 319 SVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDK 398 (520)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999999999764 89999999999999999999999999999998
Q ss_pred -CCCCCcc
Q psy12877 316 -GQKGQLS 322 (814)
Q Consensus 316 -g~~gl~~ 322 (814)
++++|.+
T Consensus 399 ~~~~~L~~ 406 (520)
T 4egv_A 399 PGQFALVG 406 (520)
T ss_dssp TTCEEEEE
T ss_pred CCCceEEe
Confidence 7777765
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=391.13 Aligned_cols=302 Identities=28% Similarity=0.405 Sum_probs=261.0
Q ss_pred CCCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLP 452 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dA-Gl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~ 452 (814)
.|++|+|||++||||+++ +|.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..+... +.++++.++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 357899999999999998 688889999999999999999999 99999999999998876544 467899999999997
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
...|.++++++|+||+.||+.|+++|++|++|++|++|+|+++..|..... +... .+..+. +.....|+
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~----~~~~----~~~~~~---~~~~~~~g 151 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV----DPNP----HMSLYA---AKASGMMG 151 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB----CCCG----GGGGTS---CGGGGSHH
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc----ccCc----cccccC---CcchhHHH
Confidence 778999999999999999999999999999999999999999877653211 0000 000011 11224599
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~ 611 (814)
+.|++||++||+|||++|+|+++||+||..+...+.|.+||+|++++++.++ ...+++|+.+| ++|+|++.++||+|.
T Consensus 152 ~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~-~~~fd~d~~~r~~~t~e~~~~~~~i~~ 230 (390)
T 1wdk_C 152 LTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGF-LKIFDYDETIRPDTTLESLAALKPAFN 230 (390)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCC-EEEECSCTTCCTTCCHHHHHTSCCSSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCc-ceeeccccccCCCCCHHHHhcCCCccc
Confidence 9999999999999999999999999999996667889999999987655443 13578999988 799999999999995
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+.+|.+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..+++++|+++|+ .+||+|.|
T Consensus 231 p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve 309 (390)
T 1wdk_C 231 PKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIE 309 (390)
T ss_dssp TTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEE
Confidence 3257799999999999999999999999999999999999999999988888888999999999999999 68999997
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=351.32 Aligned_cols=309 Identities=13% Similarity=0.044 Sum_probs=206.7
Q ss_pred ccccC--CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccC------------C
Q psy12877 371 RNFAS--KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQA------------G 436 (814)
Q Consensus 371 ~~~~~--~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~------------~ 436 (814)
+.|.. .++..||||+++||+.+..|.++++++.||+.+|+++||+|+||++++||.++.|++... +
T Consensus 9 ~~ma~mvdPRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g 88 (520)
T 4egv_A 9 HHMASMVDPRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLG 88 (520)
T ss_dssp ------CCTTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC------------
T ss_pred hhhhccCCCCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhc
Confidence 44443 456789999999999888888889999999999999999999999999888776654321 1
Q ss_pred CCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccc
Q psy12877 437 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 516 (814)
Q Consensus 437 ~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~ 516 (814)
...++++.++..+|++ ..+.++++.+|+||+++|+.|+++|++|++|+||++|+|+||+.|+....... ........
T Consensus 89 ~~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~-~~~~~~~~- 165 (520)
T 4egv_A 89 VSSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENK-PDHSETVD- 165 (520)
T ss_dssp --CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC---------------------
T ss_pred cccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccc-cCcccccc-
Confidence 2346788999999998 57899999999999999999999999999999999999999998864321110 00000000
Q ss_pred ccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc
Q psy12877 517 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 596 (814)
Q Consensus 517 ~~~~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~ 596 (814)
.........|+..+++++.+||+++++++.++..+|+++..+...+.|+++|.|+.++.+... ..+.|+.+|
T Consensus 166 -----~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a---~~np~a~~r 237 (520)
T 4egv_A 166 -----GQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVA---AKNPYSSAP 237 (520)
T ss_dssp --------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH---HHCTTSSSC
T ss_pred -----ccccccccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccccc---ccCcccccc
Confidence 000111223444555566666666666666666666666655555556666666554332211 123344444
Q ss_pred -cCCHHHhhccccccccCCCcc-ccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC--------Cc
Q psy12877 597 -KINFEKFKSLATVFQKENGTV-TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF--------PI 666 (814)
Q Consensus 597 -~~~~e~l~~~~p~f~~~~~pl-t~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~--------~~ 666 (814)
++|+|++.+++|.|..-.+|+ |++|||+++|||+|+||+|+++|+++|++|+++|++++.++.+|..+ +.
T Consensus 238 ~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~ 317 (520)
T 4egv_A 238 TERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASP 317 (520)
T ss_dssp CCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCH
T ss_pred CCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccCh
Confidence 578999999999886433554 88999999999999999999999999999999999998887765544 34
Q ss_pred hHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 667 APAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 667 g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
++..|++++|+++|+ .+|+|++|-
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 667899999999999 689999973
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=251.64 Aligned_cols=251 Identities=18% Similarity=0.189 Sum_probs=187.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
....+..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|++....
T Consensus 154 ~~~~a~~is~~lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~------------------- 212 (428)
T 3kzu_A 154 INLASGHVSIKHKLR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRI------------------- 212 (428)
T ss_dssp TTHHHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHH-------------------
T ss_pred hhhHHHHHHHHcCCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHH-------------------
Confidence 345788999999994 69999999999999999999999999999999999999853210
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
.+..+. ..+.+.. +.
T Consensus 213 ------------------------------~~~~~~-----------~~~~ls~-------------------~~----- 227 (428)
T 3kzu_A 213 ------------------------------SLAGFA-----------ACKALST-------------------ER----- 227 (428)
T ss_dssp ------------------------------HHHHHH-----------HTTCBCC-------------------SC-----
T ss_pred ------------------------------HHHHHH-----------Hcccccc-------------------Cc-----
Confidence 000000 0111110 00
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAI 244 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~ 244 (814)
..+.-..++|+..+ .++..++|||+|+||+++++|++++.+|+++|.|++...+ .|...+.+...++
T Consensus 228 -~~~~~~~~~pfd~~-------~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai 299 (428)
T 3kzu_A 228 -NDDPTAASRPYDED-------RDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCM 299 (428)
T ss_dssp -TTSGGGTCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHH
T ss_pred -cCCcccccCCcccC-------CCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHH
Confidence 00111233444322 4666789999999999999999999999999999998774 4555556778999
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHHHHHHhh----hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIK----KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e----~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
+++|+++|++++|||++|+|++++......++ .+|...+++|++|++.++|||.|++|+..++++++||++ .
T Consensus 300 ~~al~~Agl~~~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp 379 (428)
T 3kzu_A 300 VAALKRAGIVPDEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPA 379 (428)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHHcCCCHHHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCC
Confidence 99999999999999999999988854444444 456666799999999999999999999999999999997 2
Q ss_pred CCCCcc---------ccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLS---------QFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~---------~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+.. ..+...+...+++..+.++.||.+.+++|+..
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 380 TLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp BTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 221111 11111222356788888899999999999864
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=252.70 Aligned_cols=247 Identities=21% Similarity=0.243 Sum_probs=185.9
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |..
T Consensus 139 ~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~------------------- 196 (408)
T 1j3n_A 139 MASAHIAMRYGFT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMA------------------- 196 (408)
T ss_dssp HHHHHHHHHHTCC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH-------------------
T ss_pred HHHHHHHHHhCCC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHH-------------------
Confidence 5789999999995 699999999999999999999999999999999999998533 100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+... .+.+.. . ..+
T Consensus 197 ----------~~~~~~------------------------------~~~ls~-------------------~-----~~~ 212 (408)
T 1j3n_A 197 ----------IGAFAV------------------------------MRALST-------------------R-----NEE 212 (408)
T ss_dssp ----------HHHHHH------------------------------TTCBCC-------------------C-----TTC
T ss_pred ----------HHHHHh------------------------------cccccC-------------------C-----CCC
Confidence 000000 111110 0 000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.+ ..++|+.. ..+++.++|||+++||++++.|++.|.+++++|.|++...+ .|...+.+...++++
T Consensus 213 p~--~~~~pfd~-------~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~ 283 (408)
T 1j3n_A 213 PE--KASRPFTL-------SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMAR 283 (408)
T ss_dssp HH--HHCCTTBT-------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHH
T ss_pred CC--cCcccCcC-------CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHH
Confidence 11 12333331 24666789999999999999999999999999999998764 333445566889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|+|++++.. .....+.||...+++|+++++..+||+.|++|+..+++++++|++ ..
T Consensus 284 al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~ 363 (408)
T 1j3n_A 284 ALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPT 363 (408)
T ss_dssp HHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCC
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999975 455667788777789999999999999999999999999999997 22
Q ss_pred CCCccc-----cccCc---cccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQ-----FWYDE---NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~-----~~~~~---~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
..+... +.+.+ ....+++..+.++.||.+.+++|++
T Consensus 364 ~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 364 INLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp TTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 222111 01111 1124677888888899999999985
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=248.39 Aligned_cols=248 Identities=20% Similarity=0.198 Sum_probs=187.2
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++....
T Consensus 155 ~~~a~~is~~lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~------------------- 213 (427)
T 3ho9_A 155 NMVAGHLTIMYGLR--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLG------------------- 213 (427)
T ss_dssp THHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH-------------------
T ss_pred hHHHHHHHHHhCCC--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH-------------------
Confidence 34788999999994 799999999999999999999999999999999999999864110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+..+ . ..+.+.. .++
T Consensus 214 ------------------------------~~~~-----~------~~~~ls~------------------~~~------ 228 (427)
T 3ho9_A 214 ------------------------------VGGF-----G------AARALST------------------RND------ 228 (427)
T ss_dssp ------------------------------HHHH-----H------HTTCBCC------------------CTT------
T ss_pred ------------------------------HHHH-----H------hccCccc------------------CCC------
Confidence 0000 0 0011100 000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~ 245 (814)
+ .-..++|+..+ .++..++|||+++||++++.|++++.+++++|.|++...+ .|...+.+...+++
T Consensus 229 ~--~~~~~~pfd~~-------~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 299 (427)
T 3ho9_A 229 N--PQAASRPWDKE-------RDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMA 299 (427)
T ss_dssp C--HHHHCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHH
T ss_pred C--CCcccCCccCC-------CCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHH
Confidence 0 01134444422 3455589999999999999999999999999999998765 34445667788999
Q ss_pred HHHHHcCCCCCCccEEecCCCchH-----HHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSV-----VVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~-----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++||+++|||++|+|.+++. ......+.||...+++|++|++..+|||.||+|+..+++++++|++ .
T Consensus 300 ~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp 379 (427)
T 3ho9_A 300 NALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPP 379 (427)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999966664 5566667788877899999999999999999999999999999997 1
Q ss_pred CCCCccc-----cccCccc-----cccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQ-----FWYDENT-----TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~-----~~~~~~~-----~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...+... +.+.+.+ ..+++..+.++.||.+.+++|++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 380 TINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp BTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 1111110 0111111 34677888889999999999975
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-25 Score=246.18 Aligned_cols=245 Identities=19% Similarity=0.170 Sum_probs=183.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
..+..++..+|+ ..|+++++++|+|++.||.+|+++|++|++|++||+|+|.++....
T Consensus 149 ~~a~~ia~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~-------------------- 206 (416)
T 2wge_A 149 GAAAVIGLQLGA--RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP-------------------- 206 (416)
T ss_dssp HHHHHHHHHHTC--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH--------------------
T ss_pred hHHHHHHHHhcc--CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH--------------------
Confidence 468889999999 4799999999999999999999999999999999999998765210
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+. + ..+.+.. ++ .+
T Consensus 207 ----------~~~~----------------------~--------~~~~l~~---------~~---------------~~ 222 (416)
T 2wge_A 207 ----------IAAF----------------------S--------MMRAMST---------RN---------------DE 222 (416)
T ss_dssp ----------HHHH----------------------H--------TTTCBCC---------CT---------------TS
T ss_pred ----------HHHH----------------------H--------hcchhhc---------cc---------------cC
Confidence 0000 0 0111110 00 00
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.+ ...+|+. ...+++.++|||+|+||++++.|+++|.+++++|.|++...+ .|...+.++..++++
T Consensus 223 ~~--~~~~pfd-------~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~ 293 (416)
T 2wge_A 223 PE--RASRPFD-------KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTR 293 (416)
T ss_dssp GG--GSCCTTB-------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHH
T ss_pred Cc--ccccccc-------cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHH
Confidence 01 0122322 134677899999999999999999999999999999998764 344455677889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
+|+++|++++|||+||+|++++.. +...++.++. .++++++++..+|||.|++|+..++++++||++ ...
T Consensus 294 al~~agl~~~dId~ve~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~ 371 (416)
T 2wge_A 294 SLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTL 371 (416)
T ss_dssp HHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCT
T ss_pred HHHHcCCCHHHCCEEEECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 999999999999999999999975 5656666643 268888899999999999999999999999997 222
Q ss_pred CCccc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 319 GQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 319 gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
.+... +.+.+ ....+++..+.++.||.+.+++|+.
T Consensus 372 ~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 372 NYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp TCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 22111 01111 1235677888888899999999975
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=243.76 Aligned_cols=248 Identities=20% Similarity=0.168 Sum_probs=178.3
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++....
T Consensus 165 ~~a~~is~~lgl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------------- 222 (434)
T 2gp6_A 165 GAAAAVGLERHAK--AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVP-------------------- 222 (434)
T ss_dssp HHHHHHHHHSCCC--SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHH--------------------
T ss_pred hHHHHHhhhhcCC--CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH--------------------
Confidence 4788999999994 799999999999999999999999999999999999999765100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
++..++.++ .+.. +++ .++.
T Consensus 223 --------------------------------~~~~~~~~~-------~ls~---------~~~-----~p~~------- 242 (434)
T 2gp6_A 223 --------------------------------IAGFAQMRI-------VMST---------NND-----DPAG------- 242 (434)
T ss_dssp --------------------------------HHHHHTTTS-------SCCC---------CTT-----CTTT-------
T ss_pred --------------------------------HHHHHHHHH-------HhcC---------CCC-----CCCC-------
Confidence 000000000 0000 000 0111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
..+|+.. ..+++.++|||+|+||++++.|++.+.+++++|.|++...+ .|...+.+...++++
T Consensus 243 -----~~~pfd~-------~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~ 310 (434)
T 2gp6_A 243 -----ACRPFDR-------DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITR 310 (434)
T ss_dssp -----SCCSSBT-------TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHH
T ss_pred -----ceecccc-------cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHH
Confidence 1233321 24566799999999999999999999999999999998764 333344566889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-HHHHhhhcC--CCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CCC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-VLANIKKLD--IDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QKG 319 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-~l~~~e~lg--~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~g 319 (814)
+|+++|++++|||++|+|...+.. ..+.+++|+ |..+++|++|++.++|||.|++|+..++++++||+++ ...
T Consensus 311 al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~ 390 (434)
T 2gp6_A 311 AIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLN 390 (434)
T ss_dssp HHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSS
T ss_pred HHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCC
Confidence 999999999999999999544432 233333332 2234899999999999999999999999999999972 111
Q ss_pred Cccc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 320 QLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 320 l~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+... +.+.+ +...+++..+.++.||.+.+++|+.
T Consensus 391 ~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 391 LVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 1110 01111 1135677888888999999999985
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=242.54 Aligned_cols=247 Identities=17% Similarity=0.178 Sum_probs=182.1
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+......
T Consensus 142 ~~a~~ia~~lgl~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~------------------- 200 (413)
T 3o04_A 142 MGSGQVSIRFGAK--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSL------------------- 200 (413)
T ss_dssp HHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH-------------------
T ss_pred HHHHHHHHHhCCC--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHH-------------------
Confidence 3588999999994 6999999999999999999999999999999999999996441100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+ + ...+.+... .+++.
T Consensus 201 -----------~~-------------------~-----------~~~~~ls~~---------------~~p~~------- 217 (413)
T 3o04_A 201 -----------AG-------------------F-----------TANKALSLN---------------PDPET------- 217 (413)
T ss_dssp -----------HH-------------------H-----------HHTTCBCCC---------------CCTTT-------
T ss_pred -----------HH-------------------H-----------HhcccccCC---------------CCCCC-------
Confidence 00 0 001111100 00111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
..+|+.. ..++..++|||+|+||++++.|++++.+++++|.|++...+ .|...+.+...++++
T Consensus 218 -----~~~pfd~-------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~ 285 (413)
T 3o04_A 218 -----ACRPFDK-------DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKM 285 (413)
T ss_dssp -----SCCTTBT-------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHH
T ss_pred -----CcCCCcC-------CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHH
Confidence 2233332 23555699999999999999999999999999999998765 233334556789999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|+|++++.. +...+ +.++...+++|+++++..+|||.||+|+.++++++++|++ ..
T Consensus 286 al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~ 365 (413)
T 3o04_A 286 AIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPT 365 (413)
T ss_dssp HHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCB
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCC
Confidence 999999999999999999999862 23332 3345555689999999999999999999999999999997 11
Q ss_pred CCCccc-----cccC----ccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQ-----FWYD----ENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~-----~~~~----~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
..+... +.+. .....+++..+.++.||.+.+++|++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 366 IHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp TTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 111110 0111 122356778888999999999999864
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.8e-24 Score=238.58 Aligned_cols=246 Identities=14% Similarity=0.074 Sum_probs=181.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++++++..+|+ ..|+++|+++|+||+.||++|+++|++|++|+|||||+|+++..+..
T Consensus 159 ~~~a~~ia~~lgl--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~------------------ 218 (428)
T 3mqd_A 159 STASATLATFFKI--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV------------------ 218 (428)
T ss_dssp THHHHHHHHHTTC--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH------------------
T ss_pred cHHHHHHHHHcCC--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH------------------
Confidence 4589999999999 47999999999999999999999999999999999999998752210
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
. + ...+.+.. +.
T Consensus 219 -------------~-------------------~-----------~~~~~ls~-------------------~~------ 230 (428)
T 3mqd_A 219 -------------L-------------------F-----------DAMGAMSS-------------------KY------ 230 (428)
T ss_dssp -------------H-------------------H-----------HHTTCBCC-------------------TT------
T ss_pred -------------H-------------------H-----------HHhhhhcc-------------------cc------
Confidence 0 0 00111100 00
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
..+.-...+|+... .++..++|||++|||++++.|+++|.+|+++|+|++...+.... .+.++..+++++
T Consensus 231 ~~~p~~~~rpfd~~-------~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~A 303 (428)
T 3mqd_A 231 NDTPSTASRAYDKN-------RDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMA 303 (428)
T ss_dssp TTSGGGSCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHH
T ss_pred cCCcccccCcccCC-------CCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 00011123444322 34455889999999999999999999999999999998764322 456778999999
Q ss_pred HHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+ |++ +|||+||.|.+.+.. .....+.|+...+.+++++.+..+|||.||+|++.++.++++|++ ...
T Consensus 304 l~--gl~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~ 380 (428)
T 3mqd_A 304 LS--TVT-SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESA 380 (428)
T ss_dssp HT--TCC-SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCT
T ss_pred Hh--CCc-cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCC
Confidence 99 999 999999999998852 233345566544557888888889999999999999999999997 222
Q ss_pred CCccc-------cc---cCccccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ-------FW---YDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~-------~~---~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... .+ ..+....+++..+.++.||.+.+++|+..
T Consensus 381 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 381 HIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp TCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 22111 00 01113356788888899999999999864
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=236.56 Aligned_cols=248 Identities=19% Similarity=0.199 Sum_probs=181.7
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++....
T Consensus 170 ~~~a~~ia~~lgl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~------------------- 228 (451)
T 4ddo_A 170 NLAAGQISIKHRFR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVS------------------- 228 (451)
T ss_dssp THHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH-------------------
T ss_pred chHHHHHHHHhcCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHH-------------------
Confidence 34678899999994 699999999999999999999999999999999999999654110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+. .++ ..+.+... .
T Consensus 229 ------------~~------------------~~~-----------~~~~ls~~-------------------------~ 242 (451)
T 4ddo_A 229 ------------LG------------------GFA-----------AARALSTG-------------------------F 242 (451)
T ss_dssp ------------HH------------------HHH-----------HTTCBCCS-------------------------C
T ss_pred ------------HH------------------HHH-----------HHhhhccC-------------------------C
Confidence 00 000 01111100 1
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC------CCcHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------PIAPAFAI 244 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~------~~~~~~a~ 244 (814)
+.+.....+|+..+ .+++.++|||+|+||++++.|++++.+|+++|.|++...+ +..+ +.+...++
T Consensus 243 ~~~~~~~~~pfd~~-------~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d-~~~~~~~~~~~~~~~~ai 314 (451)
T 4ddo_A 243 SEEPVRASRPFDRD-------RDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTAD-AYHMTAGPDDGSGAMRAM 314 (451)
T ss_dssp TTSGGGSCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-CSCSSCCCTTCHHHHHHH
T ss_pred CcCccccccccccC-------CCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecC-CCccCCCCCCHHHHHHHH
Confidence 11222334454422 4666789999999999999999999999999999999774 3222 22447899
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
+++|+++|++++|||++|+|++++.. ++..+ +.++. ..++++++.+..+|||.|++|+.++++++++|++
T Consensus 315 ~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ip 393 (451)
T 4ddo_A 315 KLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLP 393 (451)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEEC
T ss_pred HHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999999999999999999999863 33333 33454 4567888888889999999999999999999997
Q ss_pred CCCCCccc------cccC----ccccccccceeEEecCCcceeEEEecC
Q psy12877 316 GQKGQLSQ------FWYD----ENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 g~~gl~~~------~~~~----~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+... ..+. .....+++..+.++.||.+.+++|+..
T Consensus 394 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~ 442 (451)
T 4ddo_A 394 GTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRY 442 (451)
T ss_dssp CCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEES
T ss_pred CCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeC
Confidence 22222110 0011 112356788888999999999999864
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=237.50 Aligned_cols=247 Identities=16% Similarity=0.135 Sum_probs=181.1
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccC-CCCCCccccCcccCCCCccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.++.+++..+|+. .|+++|+++|+|++.||++|+++|++|++|+|||||+|.+ +...+
T Consensus 145 ~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~------------------- 203 (416)
T 1e5m_A 145 MASGLTAINLGAK--GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSY------------------- 203 (416)
T ss_dssp HHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH-------------------
T ss_pred HHHHHHHHHhCCC--CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHH-------------------
Confidence 5899999999994 7999999999999999999999999999999999999984 32100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.+ |. ..+.+... . .++++
T Consensus 204 ------------~~-------------------~~-----------~~~~ls~~---------~-----~~p~~------ 221 (416)
T 1e5m_A 204 ------------AG-------------------FA-----------SARALSFR---------N-----DDPLH------ 221 (416)
T ss_dssp ------------HH-------------------HH-----------HTTCBCCC---------T-----TCGGG------
T ss_pred ------------HH-------------------HH-----------HcCCccCC---------C-----CCCcc------
Confidence 00 00 01111100 0 00111
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~ 245 (814)
..+|+.. ..+++.++|||+++||++++.|++.+.+++++|.|++...+. |...+.+...+++
T Consensus 222 ------~~rpfd~-------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~ 288 (416)
T 1e5m_A 222 ------ASRPFDK-------DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIA 288 (416)
T ss_dssp ------TCCTTBT-------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred ------ccccCcc-------CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHH
Confidence 2333331 246677999999999999999999999999999999998764 4444556688999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHH-HhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++|++++|||++|+|++++.. ++. ..+.+|...+++++++.+..+||+.|++|+..+++++++|++ .
T Consensus 289 ~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp 368 (416)
T 1e5m_A 289 WALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPP 368 (416)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCC
Confidence 9999999999999999999998863 222 234455555578888888889999999999999999999997 1
Q ss_pred CCCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+... +.+.+ ....+++..+.++.||.+.+++|+..
T Consensus 369 ~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 369 TINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp BTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 1111111 01111 11246777888888999999999863
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=236.64 Aligned_cols=245 Identities=16% Similarity=0.139 Sum_probs=178.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++..+|+. .|+++|+++|+|++.||++|+++|++|++|+|||||+|.++..+...
T Consensus 145 ~~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~----------------- 205 (412)
T 4ewg_A 145 HTTAVNVSLFWDLK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAV----------------- 205 (412)
T ss_dssp THHHHHHHHHTTCC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-----------------
T ss_pred cHHHHHHHHHhCCC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHH-----------------
Confidence 46899999999994 69999999999999999999999999999999999999966421100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.. ..+.+... ..+++
T Consensus 206 --------------------------------------~~------~~~~l~~~--------------~~~p~------- 220 (412)
T 4ewg_A 206 --------------------------------------FD------TLYATSTR--------------NDEPH------- 220 (412)
T ss_dssp --------------------------------------HH------TTTCBCCC--------------TTCGG-------
T ss_pred --------------------------------------HH------HhhccccC--------------CCCCC-------
Confidence 00 00011000 00011
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
..++|+.. ..+++.++|||+++||++++.|++.+.+++++|.|++...+.... .+.+...+++++
T Consensus 221 -----~~~rpfd~-------~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~A 288 (412)
T 4ewg_A 221 -----LTPRPFDA-------KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLA 288 (412)
T ss_dssp -----GCCCTTBT-------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCC-------CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 12233332 246677899999999999999999999999999999998763221 234567899999
Q ss_pred HHHcCCCCCCccEEecCCCchH----HHHHHhh-hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSV----VVLANIK-KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~----~~l~~~e-~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+++|++++|||++|.|.+.+. .+...++ .++ ++++++..+..+|||.||+|+.+++.++++|++ ...
T Consensus 289 l~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~ 365 (412)
T 4ewg_A 289 LEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTL 365 (412)
T ss_dssp HHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCT
T ss_pred HHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 9999999999999999999886 3333333 333 235566666668999999999999999999997 222
Q ss_pred CCccc------cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ------FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~------~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... +.+.+ ....+++..+.++.||.+.+++|++.
T Consensus 366 ~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 366 NLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp TCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred CCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 22111 01111 12356788888899999999999864
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=237.13 Aligned_cols=248 Identities=16% Similarity=0.192 Sum_probs=180.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++..+..
T Consensus 157 ~~a~~ia~~lgl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------------------- 215 (431)
T 2ix4_A 157 MASGHVSMKYGFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV------------------- 215 (431)
T ss_dssp HHHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH-------------------
T ss_pred HHHHHHHHHHCCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH-------------------
Confidence 5889999999995 6999999999999999999999999999999999999997652110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+. ..+.+... ...+
T Consensus 216 ------------------------------~~~~-----------~~~~ls~~-----------------------~~~~ 231 (431)
T 2ix4_A 216 ------------------------------AGFS-----------RSRALSTK-----------------------FNSS 231 (431)
T ss_dssp ------------------------------HHHH-----------HTTCBCCT-----------------------TTTC
T ss_pred ------------------------------HHHH-----------hccccCcc-----------------------ccCC
Confidence 0000 01111100 0001
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.+. ..+|+.. ..+++.++|||+|+||++++.|++++.+++++|.|++...+ .|...+.+...++++
T Consensus 232 ~~~--~~~pfd~-------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~ 302 (431)
T 2ix4_A 232 PQE--ASRPFDC-------DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTR 302 (431)
T ss_dssp GGG--SCCTTBT-------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHH
T ss_pred ccc--ccccCCC-------CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHH
Confidence 111 1223321 24667799999999999999999999999999999998764 344345567889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCC--CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDID--PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~--~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
+|+++|++++|||++|+|++++.. +...+ +.++.. ..++++++++.++|||.|++|+..++++++||++
T Consensus 303 al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ip 382 (431)
T 2ix4_A 303 ALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAP 382 (431)
T ss_dssp HHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEEC
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999999988752 22222 223321 2468888888899999999999999999999997
Q ss_pred CCCCCccc-----cccCc----cc-cccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQ-----FWYDE----NT-TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~-----~~~~~----~~-~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
....+... +.+.+ .. ..+++..+.++.||.+.+++|++
T Consensus 383 p~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 383 MTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp CCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 12221111 01111 11 34677788888899999999975
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=237.57 Aligned_cols=248 Identities=15% Similarity=0.169 Sum_probs=181.4
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+.. |..
T Consensus 165 ~~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~------------------ 223 (437)
T 2gqd_A 165 DMATGQVSIDLGAK--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMA------------------ 223 (437)
T ss_dssp THHHHHHHHHHTCC--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH------------------
T ss_pred hHHHHHHHHHhCCC--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHH------------------
Confidence 35899999999995 599999999999999999999999999999999999998643 110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ ..|. ..+.+. +++.+.
T Consensus 224 ------------~------------------~~~~-----------~~~~ls-------------------~~~~p~--- 240 (437)
T 2gqd_A 224 ------------I------------------AGFS-----------ASRALS-------------------TNDDIE--- 240 (437)
T ss_dssp ------------H------------------HHHH-----------HTTCBC-------------------CCCCTT---
T ss_pred ------------H------------------HHHH-----------hccCcc-------------------CCCCCc---
Confidence 0 0000 011111 000000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC-----CCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI-----DFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~-----~~~~~~~~a~~ 245 (814)
...+|+.. ..+++.++|||+|+||++.+.|++.+.+++++|.|++...+... ..+.+...+++
T Consensus 241 -----~~~~pfd~-------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~ 308 (437)
T 2gqd_A 241 -----TACRPFQE-------GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQ 308 (437)
T ss_dssp -----TSSCTTCT-------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHH
T ss_pred -----cccCCCCC-------CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 12334321 24677799999999999999999999999999999999876432 22345578999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHH-HhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG---- 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g---- 316 (814)
++|+++||+++|||+||+|++++.. ++. ..+.||...+++++++.+..+||+.|++|+..++++++||+++
T Consensus 309 ~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp 388 (437)
T 2gqd_A 309 AAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAP 388 (437)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999974 222 2344565556788888888899999999999999999999971
Q ss_pred CCCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+... +.+.+ ....+++..+.++.||.+.+++|+..
T Consensus 389 ~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 389 TIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp BTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred CCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 1111110 01111 11346777888888999999999864
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=235.90 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=180.6
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+.. |..
T Consensus 165 ~~~a~~ia~~lgl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~------------------ 223 (438)
T 2iwz_A 165 NMAAGQVSIRYKLK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLS------------------ 223 (438)
T ss_dssp THHHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH------------------
T ss_pred hHHHHHHHHHhCCC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHH------------------
Confidence 35899999999994 599999999999999999999999999999999999998543 110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ ..|. ..+.+... .+++
T Consensus 224 ------------~------------------~~~~-----------~~~~ls~~---------------~~p~------- 240 (438)
T 2iwz_A 224 ------------L------------------AGFS-----------RARALSTN---------------SDPK------- 240 (438)
T ss_dssp ------------H------------------HHHH-----------HTTCBCCC---------------SCTT-------
T ss_pred ------------H------------------HHHH-----------hcCCcCCC---------------CCCC-------
Confidence 0 0000 01111100 0001
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~ 245 (814)
...+|+..+ .+++.++|||+++||++++.|++.+.+++++|.|++...+. |...+.+...+++
T Consensus 241 -----~~~~pfd~~-------~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~ 308 (438)
T 2iwz_A 241 -----LACRPFHPK-------RDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMA 308 (438)
T ss_dssp -----TSCCTTCTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred -----cccccCCCC-------CCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHH
Confidence 123343322 35567999999999999999999999999999999997764 4334556688999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG---- 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g---- 316 (814)
++|+++|++++|||++|+|++++.. ++..+ +.||....++++++.+..+||+.||+|+..+++++++|+++
T Consensus 309 ~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp 388 (438)
T 2iwz_A 309 AALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPP 388 (438)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCC
Confidence 9999999999999999999999874 33333 34554445788877777789999999999999999999971
Q ss_pred CCCCccc-----cccCc-------cccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQ-----FWYDE-------NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~-----~~~~~-------~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...+... +.+.+ ....+++..+.++.||.+.+++|++
T Consensus 389 ~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 389 TLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp BTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 1111100 00111 1125677788888899999999975
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=228.77 Aligned_cols=245 Identities=16% Similarity=0.096 Sum_probs=175.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccC-CCCCCccccCcccCCCCcccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.+++.+++..+|+. .|+++|+++|+|++.||.+|+++|++| +|+|||+|+|.+ +...+
T Consensus 146 ~~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~------------------ 204 (415)
T 1tqy_B 146 AVNTGQISIRHGMR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGW------------------ 204 (415)
T ss_dssp THHHHHHHHHHTCC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHH------------------
T ss_pred hHHHHHHHHHhCCC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHH------------------
Confidence 56899999999995 699999999999999999999999999 999999999984 32110
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
. .+ . ..+.+.. + -+++.
T Consensus 205 --------------~------------------~~-----~------~~~~ls~----------~-----~~~~~----- 221 (415)
T 1tqy_B 205 --------------V------------------SQ-----I------ASGRIST----------A-----TDPDR----- 221 (415)
T ss_dssp --------------H------------------HH-----H------TTSCBCC----------C-----SCGGG-----
T ss_pred --------------H------------------HH-----H------hccCccC----------C-----CCCCC-----
Confidence 0 00 0 0011100 0 00111
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC-CccEEEEEEEEecCCCCCCCC--cHHHHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATEPIDFPI--APAFAIPT 246 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~-~p~a~I~g~~~~~~~p~~~~~--~~~~a~~~ 246 (814)
..+|+.. ..+++.++|||+++||++++.|+++|. +++++|.|++...+....... +...++++
T Consensus 222 -------~~~pfd~-------~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~ 287 (415)
T 1tqy_B 222 -------AYLPFDE-------RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRL 287 (415)
T ss_dssp -------SCCTTST-------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHH
T ss_pred -------CcCCCCC-------CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHH
Confidence 2233321 246778999999999999999999999 999999999998764322111 67889999
Q ss_pred HHHHcCCCCCCccEEecCCCchH----HHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSV----VVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QK 318 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~ 318 (814)
+|+++|++++|||++|+|++++. .+...++.+ |...++.++.-+..+|||.||+|+.+++.++++|+++ ..
T Consensus 288 al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~ 366 (415)
T 1tqy_B 288 ALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRV-FGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTA 366 (415)
T ss_dssp HHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHH-HCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBC
T ss_pred HHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHH-hCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 99999999999999999999984 444444444 2233344445555579999999999999999999971 11
Q ss_pred CCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... +.+.+ ....+++..+.++.||.+.+++|+.+
T Consensus 367 ~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 367 GVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp SCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecC
Confidence 11110 00111 11356788888888999999999864
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-23 Score=230.32 Aligned_cols=243 Identities=18% Similarity=0.152 Sum_probs=176.0
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCcc
Q psy12877 16 QAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLS 95 (814)
Q Consensus 16 ~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (814)
+++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.+.. |..
T Consensus 151 ~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~----------------------- 204 (424)
T 1tqy_A 151 EVAWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIV----------------------- 204 (424)
T ss_dssp HHHHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH-----------------------
T ss_pred HHHHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHH-----------------------
Confidence 899999995 699999999999999999999999999999999999998643 110
Q ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHhh
Q psy12877 96 DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKF 175 (814)
Q Consensus 96 ~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~ 175 (814)
+ ..+ + ..+.+... . .++|.
T Consensus 205 -------~------------------~~~---~--------~~~~ls~~---------~-----~~p~~----------- 223 (424)
T 1tqy_A 205 -------V------------------ACF---D--------AIRATTAR---------N-----DDPEH----------- 223 (424)
T ss_dssp -------H------------------HHH---H--------HTTCBCCC---------C-----SCGGG-----------
T ss_pred -------H------------------HHH---H--------hhccccCC---------C-----CCCCC-----------
Confidence 0 000 0 01111100 0 01111
Q ss_pred hcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHHHHHH
Q psy12877 176 KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKN 250 (814)
Q Consensus 176 ~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~ 250 (814)
..+|+.. ..+++.++|||+++||++.+.|++.|.+++++|.|++...+. |...+.+...+++++|++
T Consensus 224 -~~rpfd~-------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ 295 (424)
T 1tqy_A 224 -ASRPFDG-------TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDE 295 (424)
T ss_dssp -CCCTTBT-------TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHH
T ss_pred -CccCCCC-------CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 2233331 246677999999999999999999999999999999987763 333345567899999999
Q ss_pred cCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CCCCc
Q psy12877 251 GGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QKGQL 321 (814)
Q Consensus 251 aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~gl~ 321 (814)
+|++++|||++|.|++++.. ++..+ +.|+...+++++++.+..+||+.|++|+..+++++++|+++ ...+.
T Consensus 296 agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~ 375 (424)
T 1tqy_A 296 SRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLR 375 (424)
T ss_dssp HTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCC
T ss_pred cCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCC
Confidence 99999999999999999863 33333 34444444677766677789999999999999999999972 11111
Q ss_pred cc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 322 SQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 322 ~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
.. +.+.+ +...+++..+.++.||.+.+++|+.
T Consensus 376 ~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~ 416 (424)
T 1tqy_A 376 TSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 416 (424)
T ss_dssp SBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEcc
Confidence 10 01111 1135677888888899999999986
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=228.58 Aligned_cols=244 Identities=19% Similarity=0.213 Sum_probs=178.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||||+|.+.. |.
T Consensus 161 ~~a~~is~~lgl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~-------------------- 217 (430)
T 1ox0_A 161 MASGNVAMRFGAN--GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PF-------------------- 217 (430)
T ss_dssp HHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH--------------------
T ss_pred HHHHHHHHHhcCC--CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH--------------------
Confidence 4788899999995 699999999999999999999999999999999999998543 10
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
. +..+ . ..+.+ ..++.++.
T Consensus 218 ----------~------------------~~~~-----~------~~~~l-------------------s~~~~p~~--- 236 (430)
T 1ox0_A 218 ----------A------------------IAGF-----Q------ALTAL-------------------STTEDPTR--- 236 (430)
T ss_dssp ----------H------------------HHHH-----H------HTTCB-------------------CCCSSTTS---
T ss_pred ----------H------------------HHHH-----H------hCCCc-------------------cCCCCCCC---
Confidence 0 0000 0 01111 11111111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~ 246 (814)
..+|+.+ ..|++.++|||+++||++++.|++.|.+++++|.|++...+. |...+.+...++++
T Consensus 237 -----~~~pFd~-------~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~ 304 (430)
T 1ox0_A 237 -----ASIPFDK-------DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKL 304 (430)
T ss_dssp -----SSCTTBT-------TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHH
T ss_pred -----CCCCCCC-------CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHH
Confidence 2233331 257778999999999999999999999999999999987652 33345567889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHHH----H-HHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVVV----L-ANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~~----l-~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||+||+|++++... . ...+.+|- .-+||..+|. +|||.||+|+..+++++++|++ ..
T Consensus 305 al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ipp~ 381 (430)
T 1ox0_A 305 ALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNFVPMT 381 (430)
T ss_dssp HHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTEECCB
T ss_pred HHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCccCCC
Confidence 9999999999999999999999753 1 22234443 2367777776 5999999999999999999997 11
Q ss_pred CCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
..+... +.+.+ +...+++..+.++.||.+.+++|+..
T Consensus 382 ~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 382 AGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp SSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 222111 01111 12356778888888999999999864
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=218.85 Aligned_cols=244 Identities=14% Similarity=0.086 Sum_probs=172.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.++....
T Consensus 140 ~~~a~~is~~lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~------------------- 198 (406)
T 2vba_A 140 SGVSACLATPFKIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMA------------------- 198 (406)
T ss_dssp THHHHHHHTTTTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-------------------
T ss_pred HHHHHHHHHhccCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHH-------------------
Confidence 36889999999994 799999999999999999999999999999999999999764100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ . ..+ .+.+... ++ .+++
T Consensus 199 ------------~----~--~~~------------------------~~~ls~~--------~~-----~~p~------- 216 (406)
T 2vba_A 199 ------------C----E--FDA------------------------MGALSTK--------YN-----DTPE------- 216 (406)
T ss_dssp ------------H----H--HHH------------------------TTCBCCS--------CT-----TSGG-------
T ss_pred ------------H----H--Hhh------------------------ccccccc--------cC-----CCCc-------
Confidence 0 0 000 1111100 00 0011
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
...+|+... .++..++|||+++||++++.|+++|.+++++|.|++...+.... .+.+...+++++
T Consensus 217 -----~~~~pfd~~-------~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~a 284 (406)
T 2vba_A 217 -----KASRTYDAH-------RDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMA 284 (406)
T ss_dssp -----GSCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHH
T ss_pred -----cccCcCcCC-------CCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 123344322 35566899999999999999999999999999999997763211 145667899999
Q ss_pred HHHcCCCCCCccEEecCCCchHH-HHH---Hh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSVV-VLA---NI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~~-~l~---~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+++| +|||++|.|++++.. ... .+ +.||.. ++++++-+-.+||+.||+|+..+++++++|++ ...
T Consensus 285 l~~ag---~dId~ve~HgtgT~~gD~~E~~al~~~fg~~--~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~ 359 (406)
T 2vba_A 285 MHGVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359 (406)
T ss_dssp HTTCC---SCCCEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCC
T ss_pred HhhCC---CCccEEEeeCccCcccCHHHHHHHHHHhCcC--CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999 999999999999863 222 22 334433 34454444458999999999999999999997 111
Q ss_pred CCccc------cccCccc---cccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ------FWYDENT---TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~------~~~~~~~---~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... +.+.+.. ..+++..+.++.||.+.+++|+..
T Consensus 360 ~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 360 NIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp CCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 21111 0111111 346777888888999999999864
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-21 Score=236.48 Aligned_cols=242 Identities=19% Similarity=0.191 Sum_probs=184.5
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.++......
T Consensus 177 ~~a~ris~~lgl~--Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~------------------ 236 (917)
T 2hg4_A 177 VASGRVAYCLGLE--GPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT------------------ 236 (917)
T ss_dssp HHHHHHHHHHTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHH------------------
T ss_pred hHHHHHHHhcCCC--CCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhH------------------
Confidence 5788999999994 69999999999999999999999999999999999999987521100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+ ...+. +.+|.
T Consensus 237 -------------------------------~~-----------~~~~~-------------------ls~~g------- 248 (917)
T 2hg4_A 237 -------------------------------EF-----------RSQGG-------------------LAADG------- 248 (917)
T ss_dssp -------------------------------HH-----------TTSSC-------------------BCTTS-------
T ss_pred -------------------------------hh-----------hhccC-------------------cCCcc-------
Confidence 00 00011 11221
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC-----cHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI-----APAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~-----~~~~a~~~ 246 (814)
.++|+. +..|++.++||+++|||.+.+.|++.|.+++++|.|++.+.+......+ +...++++
T Consensus 249 -----~~~pFd-------~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~ 316 (917)
T 2hg4_A 249 -----RCKPFS-------KAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRR 316 (917)
T ss_dssp -----CCCTTB-------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHH
T ss_pred -----ccCccc-------ccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHH
Confidence 122322 3567888999999999999999999999999999999998775543322 33579999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----H-HHHhhhcCCC---CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc---
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----V-LANIKKLDID---PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~-l~~~e~lg~~---~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--- 315 (814)
+|+++|++++|||++|+|++++.. + ....+.+|.. ..++|+++++..+||+.+++|+..+++++++|++
T Consensus 317 Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~i 396 (917)
T 2hg4_A 317 ALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEM 396 (917)
T ss_dssp HHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEE
T ss_pred HHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999953 2 2334455653 2479999999999999999999999999999997
Q ss_pred -CCCCCcc------------------ccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 316 -GQKGQLS------------------QFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 -g~~gl~~------------------~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+.. ..|.. ....+++.++.++.||.+.+++||.+
T Consensus 397 pp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~-~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 397 PRTLHFDEPSPQIEWDLGAVSVVSQARSWPA-GERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp CCCTTCCSBCTTSCC---CCEECCSCEECCC-CSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCCCCCCCccCCccccceeecCCcccCCC-CCCCCEEEEeeecCCCceEEEEeccC
Confidence 1111110 12321 12357888888888999999999864
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.4e-21 Score=231.58 Aligned_cols=242 Identities=15% Similarity=0.180 Sum_probs=182.9
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.++....
T Consensus 155 ~~a~ris~~lgl~--Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~-------------------- 212 (915)
T 2qo3_A 155 VASGRISYTMGLE--GPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV-------------------- 212 (915)
T ss_dssp HHHHHHHHHHTBC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH--------------------
T ss_pred HHHHHHHHHhCCC--CCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH--------------------
Confidence 5788999999994 699999999999999999999999999999999999999765110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+. .+ + ..+. +.+|..
T Consensus 213 -----------~~------------------~~---~--------~~~~-------------------ls~~g~------ 227 (915)
T 2qo3_A 213 -----------FV------------------DF---S--------RQRA-------------------LAADGR------ 227 (915)
T ss_dssp -----------HH------------------HH---H--------TTTC-------------------BCSSCC------
T ss_pred -----------HH------------------HH---h--------hhcc-------------------cCCCCC------
Confidence 00 00 0 0111 111111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC-----CCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-----PIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~-----~~~~~~a~~~ 246 (814)
++|+.. ..|++.++||+++|||.+.+.|++.|.+++++|.|++...+..... +.+...++++
T Consensus 228 ------~~~Fd~-------~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~ 294 (915)
T 2qo3_A 228 ------SKAFGA-------GADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQ 294 (915)
T ss_dssp ------CCTTBT-------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHH
T ss_pred ------cccccC-------CCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHH
Confidence 223321 2366678999999999999999999999999999999977543221 2345779999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCC---CCcccCCCCccccCCCCChHHHHHHHHHHHHHc---
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--- 315 (814)
+|+++|++++|||++|.|++++.. .....+.++... .|+|+++++..+||+.|++|+..+++++++|++
T Consensus 295 Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~i 374 (915)
T 2qo3_A 295 ALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGEL 374 (915)
T ss_dssp HHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEE
T ss_pred HHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCC
Confidence 999999999999999999998743 233445666543 489999999999999999999999999999997
Q ss_pred -CCCCCcc------------------ccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 316 -GQKGQLS------------------QFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 -g~~gl~~------------------~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+.. ..|.. ....+++.++.++.||.+.+++||.+
T Consensus 375 pp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~-~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 375 PATLHVEEPTPHVDWSSGGVALLAGNQPWRR-GERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp CCCSSCSSBCTTSCCSSSSEEECSSCEECCS-SSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCCCCCCCcccccccCceeeecCCccccc-CCCCcEEEEeeecCCCceEEEEEeec
Confidence 1111110 12321 23357888888888999999999864
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=242.58 Aligned_cols=253 Identities=13% Similarity=0.126 Sum_probs=177.9
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+|.+...+|+ .+|+++|+++|+||+.||++|+++|++|+||++||||+|.++..++..
T Consensus 2719 aa~is~~~lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~------------------- 2777 (3089)
T 3zen_D 2719 AAHVMQSYVGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIG------------------- 2777 (3089)
T ss_dssp HHHHHHHTTCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------------------
T ss_pred HHHHHHHHcCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHH-------------------
Confidence 34444456699 579999999999999999999999999999999999999976422100
Q ss_pred CcccccccccHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 93 GLSDVYNKIHMGNC-AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 93 ~~~~~~~~~~~~~~-a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+ ..|+.. ...++..++. +++.
T Consensus 2778 -f------~~~~als~~~~~~~~~~--------------------------------------------sp~~------- 2799 (3089)
T 3zen_D 2778 -F------GDMAATADTEMMRAKGI--------------------------------------------SDSK------- 2799 (3089)
T ss_dssp -H------HHHTCBCCHHHHHHTTC--------------------------------------------CTTT-------
T ss_pred -H------HHhhhhhcchhhhhccC--------------------------------------------Cccc-------
Confidence 0 000000 0001111110 1111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC------------c
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI------------A 239 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~------------~ 239 (814)
.++|+....+|.+ ++|||+++||++.+.|++.|.++++.|.+.+...+....... +
T Consensus 2800 -----~crpFd~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~ 2867 (3089)
T 3zen_D 2800 -----FSRANDRRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGG 2867 (3089)
T ss_dssp -----SCCSSBTTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTG
T ss_pred -----ccCccccCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhh
Confidence 2334432333444 789999999999999999999999988888775542211111 2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchH----HHH----HHhhhcCCCC-CCcccCCCCccccCCCCChHHHHHHHHH
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSV----VVL----ANIKKLDIDP-SKVNVHGGAVSLGHPIGMSGARIVIHLC 310 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~----~~l----~~~e~lg~~~-~~vN~~GG~la~Ghp~gasG~~~l~e~v 310 (814)
...+++++|+++|++++|||+||.|++++. .+. ...+.||... .++|+++++..+|||.||+|+.+++.++
T Consensus 2868 q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~l 2947 (3089)
T 3zen_D 2868 RESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLC 2947 (3089)
T ss_dssp GGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHH
Confidence 234799999999999999999999998885 222 3456788765 5899999999999999999999999999
Q ss_pred HHHHc----CCCCCccc-----------------cccCccccccccceeEEecCCcceeEEEecCcch
Q psy12877 311 HALKS----GQKGQLSQ-----------------FWYDENTTQRLSEEVVCRAGKEGSIALISCPTLY 357 (814)
Q Consensus 311 ~qLr~----g~~gl~~~-----------------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~~~ 357 (814)
++|++ +...+... .|. .....+++.+++++.||.+.+++|+.+...
T Consensus 2948 l~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~-~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2948 QILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLR-GKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp HHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCC-TTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred HHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCC-CCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 99997 22222111 121 122256888888999999999999976543
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=212.04 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=171.4
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
...++..++..+|+ ..|+++|+++|+|++.||++|+++|++|+||++||||+|.++....
T Consensus 139 ~~~~a~ris~~lgl--~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~------------------ 198 (965)
T 3hhd_A 139 RAMMANRLSFFFDF--RGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT------------------ 198 (965)
T ss_dssp TTHHHHHHHHHHTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH------------------
T ss_pred cchHHHHHHHHhCC--CCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH------------------
Confidence 35688999999999 4799999999999999999999999999999999999999875211
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+...++ .+.+ .+|.
T Consensus 199 ----------------------------------~~~~~~--------~~~l-------------------s~~g----- 212 (965)
T 3hhd_A 199 ----------------------------------SVQFLR--------LGML-------------------SPEG----- 212 (965)
T ss_dssp ----------------------------------HHHHHH--------HTCB-------------------CTTC-----
T ss_pred ----------------------------------HHHHHh--------ccCc-------------------CCCC-----
Confidence 000000 0111 1111
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC------CcHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP------IAPAFA 243 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~------~~~~~a 243 (814)
.++++..+.+|++ .+||+++|||++.+.|+ +++++|+|++.+.+.....+ .+...+
T Consensus 213 -------~~~~Fd~~adG~~-------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~ 274 (965)
T 3hhd_A 213 -------TCKAFDTAGNGYC-------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQL 274 (965)
T ss_dssp -------CCCTTBTTCCSBC-------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHH
T ss_pred -------ccccchhccCCcc-------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHH
Confidence 1223332333444 58999999999999885 47899999999887654222 234679
Q ss_pred HHHHHHHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCC-CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 244 IPTLLKNGGVAKQDVALWEINEAFSV----VVLANI-KKLDID-PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 244 ~~~al~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~-~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
++++|++||++++|||++|.|.+++. .+...+ +.++-. ..|+.+.+-+..+||+.||+|+..++.++++|++
T Consensus 275 i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ 354 (965)
T 3hhd_A 275 IRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGL 354 (965)
T ss_dssp HHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCC
Confidence 99999999999999999999999983 344443 444432 2356666666668999999999999999999997
Q ss_pred --CCCCCccc-----cccC-------ccc--cccccceeEEecCCcceeEEEecC
Q psy12877 316 --GQKGQLSQ-----FWYD-------ENT--TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g~~gl~~~-----~~~~-------~~~--~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+... +|.. ... ..+.+.++.++.||.+.+++||.+
T Consensus 355 ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 355 WAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp ECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred cCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccC
Confidence 22222111 0110 000 122566777888999999999854
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=194.79 Aligned_cols=191 Identities=19% Similarity=0.226 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCCC
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGLP 452 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl~ 452 (814)
.+|+.+++++||+|||+++++|| +|++|+..+.. .....+..++..+|+.
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK 157 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC
Confidence 37999999999999999999999 79999765421 0124688899999995
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc-ccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~-s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
.|.++++++|+||+.||+.|+++|++|++|++|++|+|.+ +...+ .. +
T Consensus 158 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~--------------------~~---------~ 206 (416)
T 1e5m_A 158 --GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSY--------------------AG---------F 206 (416)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH--------------------HH---------H
T ss_pred --CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHH--------------------HH---------H
Confidence 5999999999999999999999999999999999999985 31100 00 0
Q ss_pred HHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 532 GNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 532 g~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
...+. +++ ..+|.+ ..|| |
T Consensus 207 --------~~~~~ls~~--------------~~~p~~-------------------------------------~~rp-f 226 (416)
T 1e5m_A 207 --------ASARALSFR--------------NDDPLH-------------------------------------ASRP-F 226 (416)
T ss_dssp --------HHTTCBCCC--------------TTCGGG-------------------------------------TCCT-T
T ss_pred --------HHcCCccCC--------------CCCCcc-------------------------------------cccc-C
Confidence 00000 000 001111 0112 2
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
++ ..|++.++|||+++||++++.|+++|.+++++|+|++...+. |...+.+...+++++|+++++ .+|
T Consensus 227 d~------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~d 300 (416)
T 1e5m_A 227 DK------DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEM 300 (416)
T ss_dssp BT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred cc------CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhH
Confidence 21 135677999999999999999999999999999999987664 544566778899999999999 589
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
|+|.+-
T Consensus 301 Id~ve~ 306 (416)
T 1e5m_A 301 VSYINA 306 (416)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 999983
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-19 Score=216.65 Aligned_cols=251 Identities=15% Similarity=0.158 Sum_probs=165.9
Q ss_pred HHHHHHH-HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 13 PCRQAVI-FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 13 ~ar~~a~-~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.+.+++. .+|+ .+|+++++++|+|++.||..|++.|++|++|++||||+|.++..+..... .++....
T Consensus 1084 ~Aa~Vs~~~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa---~mgaLS~------ 1152 (1688)
T 2pff_A 1084 MSAWVNMLLISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFG---NMKATSN------ 1152 (1688)
T ss_dssp HHHHHHHSSCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTT---TTSCSCC------
T ss_pred HHHHHHHHHcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHH---hcccccc------
Confidence 3445666 6888 57999999999999999999999999999999999999998654321100 0000000
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+.+ .+.. | .++++
T Consensus 1153 -------------------------~~~--------------------e~a~-----------G----~~Pd~------- 1165 (1688)
T 2pff_A 1153 -------------------------TLE--------------------EFEH-----------G----RTPAE------- 1165 (1688)
T ss_dssp -------------------------TTT--------------------TTTS-----------S----CCSSS-------
T ss_pred -------------------------Chh--------------------hhhc-----------C----CChhh-------
Confidence 000 0000 0 11222
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC------CC-------
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------PI------- 238 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~------~~------- 238 (814)
.++|+...++| ..++|||+++||++.+.|+++|.+++++|.|++.+++..... +.
T Consensus 1166 -----~cRPFd~~rdG-------fv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~ 1233 (1688)
T 2pff_A 1166 -----MSRPATTTRNG-------FMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREH 1233 (1688)
T ss_dssp -----SCCSSSSSCCC-------CCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSC
T ss_pred -----ccCcCccCCCC-------CccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhc
Confidence 23344423234 347899999999999999999999999999999877632110 10
Q ss_pred --------------------------------------------------------------------------------
Q psy12877 239 -------------------------------------------------------------------------------- 238 (814)
Q Consensus 239 -------------------------------------------------------------------------------- 238 (814)
T Consensus 1234 ~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f 1313 (1688)
T 2pff_A 1234 HSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDF 1313 (1688)
T ss_dssp CCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSS
T ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCce
Confidence
Q ss_pred ----cHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHH-Hhhhc---CCCC---CCcccCCCCccccCCCCChHH
Q psy12877 239 ----APAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKL---DIDP---SKVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 239 ----~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~l---g~~~---~~vN~~GG~la~Ghp~gasG~ 303 (814)
+...++++||+++||+++|||++|.|++++.. +.. ..+.+ +-.. -+++...+. +|||.||+|+
T Consensus 1314 ~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~Ksl--iGHp~GAAGa 1391 (1688)
T 2pff_A 1314 YKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFL--TGHPKGAAGA 1391 (1688)
T ss_dssp SSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTT--TCCCSSTHHH
T ss_pred ecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhh--hcchHHHhhH
Confidence 00357899999999999999999999998821 111 12233 2221 134444444 5999999999
Q ss_pred HHHHHHHHHHHc----CCCCCccc------ccc----Cccc---cccccceeEEecCCcceeEEEecCc
Q psy12877 304 RIVIHLCHALKS----GQKGQLSQ------FWY----DENT---TQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 304 ~~l~e~v~qLr~----g~~gl~~~------~~~----~~~~---~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
.+++.++++|++ +...+... +.+ .... ..+++..++++.||.++.++|+.+.
T Consensus 1392 ~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1392 WMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp HHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 999999999997 22222110 111 1111 2467778888889999888887554
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.7e-18 Score=190.49 Aligned_cols=193 Identities=20% Similarity=0.236 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHcCC-CCcCcc----eEEEEecccC--------------------------CCCChHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANM-DKSDVQ----EVYMGNVCQA--------------------------GLGQAPCRQAVIFAG 450 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl-~~~dID----~vivG~~~~~--------------------------~~~~~~a~~~a~~~G 450 (814)
..+|+.+|+++||+|||+ ++++|| ++++|+..+. ......+..++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 467999999999999999 788899 8888875421 012346888999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||+.|+++|++|++|++||+|+|.++..+..
T Consensus 157 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~------------------------------ 204 (412)
T 4ewg_A 157 LK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA------------------------------ 204 (412)
T ss_dssp CC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH------------------------------
T ss_pred CC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH------------------------------
Confidence 95 5999999999999999999999999999999999999997521100
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
.+ .....+.. ...+| |. ..|| |
T Consensus 205 -------------------------~~------~~~~~l~~---------~~~~p------~~-----------~~rp-f 226 (412)
T 4ewg_A 205 -------------------------VF------DTLYATST---------RNDEP------HL-----------TPRP-F 226 (412)
T ss_dssp -------------------------HH------HTTTCBCC---------CTTCG------GG-----------CCCT-T
T ss_pred -------------------------HH------HHhhcccc---------CCCCC------CC-----------CCCC-C
Confidence 00 00000000 00000 00 0112 2
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC---CCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI---DFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~---~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
++ ..|++.++|||++|||++++.|+++|.+++++|+|++...+... ..+.+...+++++|+++++ .+||+
T Consensus 227 d~------~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId 300 (412)
T 4ewg_A 227 DA------KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIA 300 (412)
T ss_dssp BT------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CC------CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCC
Confidence 11 23667799999999999999999999999999999998766221 1345777899999999999 68999
Q ss_pred Eehh
Q psy12877 687 YDEN 690 (814)
Q Consensus 687 y~e~ 690 (814)
|.+-
T Consensus 301 ~ve~ 304 (412)
T 4ewg_A 301 YVNA 304 (412)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9983
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.6e-18 Score=214.11 Aligned_cols=253 Identities=15% Similarity=0.176 Sum_probs=170.3
Q ss_pred HHHHHHH-HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 13 PCRQAVI-FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 13 ~ar~~a~-~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.+.+++. .+|+ .+|+++++++|+||+.||++|++.|++|+||++||||+|.++.....
T Consensus 1283 ~aa~is~~~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~------------------- 1341 (1887)
T 2uv8_A 1283 MSAWVNMLLISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF------------------- 1341 (1887)
T ss_dssp HHHHHHHHTTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-------------------
T ss_pred HHHHHHHHHcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-------------------
Confidence 4556666 4888 57999999999999999999999999999999999999987532110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+ ....+.+-+..++++ .+ .++++
T Consensus 1342 ------------~------f~~m~als~~~~e~~------------~g--------------------~~p~~------- 1364 (1887)
T 2uv8_A 1342 ------------E------FGNMKATSNTLEEFE------------HG--------------------RTPAE------- 1364 (1887)
T ss_dssp ------------H------HHHTTCBCCHHHHHH------------TT--------------------CCGGG-------
T ss_pred ------------H------HHHhhhhccchhhhc------------cc--------------------CCCcc-------
Confidence 0 011111111111110 00 01222
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC-------------
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI------------- 238 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~------------- 238 (814)
.++|+...++|++ ++||++++||++.+.|+++|.+++++|.|++.+++.......
T Consensus 1365 -----~~RPfd~~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~ 1432 (1887)
T 2uv8_A 1365 -----MSRPATTTRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREH 1432 (1887)
T ss_dssp -----SCCTTBTTCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCC
T ss_pred -----CcCCCcccCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCcccccccccc
Confidence 2344443333544 789999999999999999999999999999998764321100
Q ss_pred -------cH-----------------------------------------------------------------------
Q psy12877 239 -------AP----------------------------------------------------------------------- 240 (814)
Q Consensus 239 -------~~----------------------------------------------------------------------- 240 (814)
.+
T Consensus 1433 ~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~ 1512 (1887)
T 2uv8_A 1433 HSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDF 1512 (1887)
T ss_dssp CSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred ccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 00
Q ss_pred ------HHHHHHHHHHcCCCCCCccEEecCCCchHH-H---HH-Hhhhc---CCCC-CCcccCCCCccccCCCCChHHHH
Q psy12877 241 ------AFAIPTLLKNGGVAKQDVALWEINEAFSVV-V---LA-NIKKL---DIDP-SKVNVHGGAVSLGHPIGMSGARI 305 (814)
Q Consensus 241 ------~~a~~~al~~aGl~~~DID~~e~~d~fa~~-~---l~-~~e~l---g~~~-~~vN~~GG~la~Ghp~gasG~~~ 305 (814)
..+++++|+++||+++|||++|.|++++.. . .. ..+.| |-.. .|+.+..-+-.+|||.||+|+.+
T Consensus 1513 ~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~ 1592 (1887)
T 2uv8_A 1513 YKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWM 1592 (1887)
T ss_dssp TTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHH
T ss_pred hhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHH
Confidence 358999999999999999999999999932 1 11 11222 3332 23443333334699999999999
Q ss_pred HHHHHHHHHc----CCCCCccc------ccc----Cccc---cccccceeEEecCCcceeEEEecCc
Q psy12877 306 VIHLCHALKS----GQKGQLSQ------FWY----DENT---TQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 306 l~e~v~qLr~----g~~gl~~~------~~~----~~~~---~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
++.++++|++ +...+... +.+ .... ..+++..++++.||.+..++|+.+.
T Consensus 1593 li~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1593 MNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp HHHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 9999999998 33332111 111 1111 2467778888889999999998764
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-18 Score=212.52 Aligned_cols=251 Identities=14% Similarity=0.147 Sum_probs=169.2
Q ss_pred HHHHHHH-HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 13 PCRQAVI-FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 13 ~ar~~a~-~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.+.+++. .+|+ .+|.++++++|+||+.||+.|++.|++|+||++||||+|.++....
T Consensus 1258 ~aa~vs~~~lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~-------------------- 1315 (1878)
T 2uv9_A 1258 MAAWVNMLLLSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS-------------------- 1315 (1878)
T ss_dssp HHHHHHHHTCCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH--------------------
T ss_pred HHHHHHHHhcCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH--------------------
Confidence 4556666 4888 5799999999999999999999999999999999999998653211
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
++ ....+.+-...++++ .| .++++.
T Consensus 1316 -----------~~------f~~m~als~~~de~a------------~g--------------------~~p~~~------ 1340 (1878)
T 2uv9_A 1316 -----------YE------FANMGATSNAKEEFA------------RG--------------------REPGEM------ 1340 (1878)
T ss_dssp -----------HH------HHHHTCBCCHHHHHT------------TT--------------------CCTTSS------
T ss_pred -----------HH------HHHhhhhccchhhhh------------cC--------------------CCcccC------
Confidence 00 011111111112221 00 122333
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC----CCcH-------
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF----PIAP------- 240 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~----~~~~------- 240 (814)
+||+....+|+ .++||++++||++.+.|+++|.+++++|.|++.+++..... +.+.
T Consensus 1341 ------~RPfd~~r~Gf-------v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~ 1407 (1878)
T 2uv9_A 1341 ------SRPTSTTRNGF-------MESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREK 1407 (1878)
T ss_dssp ------CCSSBTTCCCB-------CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCC
T ss_pred ------cCCCccCCCCC-------cccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhc
Confidence 33443233344 47899999999999999999999999999999987633211 1110
Q ss_pred --------------------------------------------------------------------------------
Q psy12877 241 -------------------------------------------------------------------------------- 240 (814)
Q Consensus 241 -------------------------------------------------------------------------------- 240 (814)
T Consensus 1408 ~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~ 1487 (1878)
T 2uv9_A 1408 SGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQT 1487 (1878)
T ss_dssp CCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred ------------HHHHHHHHHHcCCCCCCccEEecCCCchHH-HHHH----hhhc---CCCC-CC--cccCCCCccccCC
Q psy12877 241 ------------AFAIPTLLKNGGVAKQDVALWEINEAFSVV-VLAN----IKKL---DIDP-SK--VNVHGGAVSLGHP 297 (814)
Q Consensus 241 ------------~~a~~~al~~aGl~~~DID~~e~~d~fa~~-~l~~----~e~l---g~~~-~~--vN~~GG~la~Ghp 297 (814)
+.+++++|+++||+++|||++|.|++++.. .... .+.+ +-.. .| ++...+. +|||
T Consensus 1488 ~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~Ksl--iGH~ 1565 (1878)
T 2uv9_A 1488 SFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYL--TGHP 1565 (1878)
T ss_dssp HHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHH--HCBC
T ss_pred hhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccc--cCCh
Confidence 168999999999999999999999999932 2111 1222 3222 12 3333333 5999
Q ss_pred CCChHHHHHHHHHHHHHc----CCCCCccc----------cccCccc---cccccceeEEecCCcceeEEEecCc
Q psy12877 298 IGMSGARIVIHLCHALKS----GQKGQLSQ----------FWYDENT---TQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 298 ~gasG~~~l~e~v~qLr~----g~~gl~~~----------~~~~~~~---~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
.|++|+.+++.++.+|++ +.+.+... .+..... ..+.+...+++.||.+..++|+.+.
T Consensus 1566 ~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1566 KGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp TTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 999999999999999998 33332111 1111111 2467778888889999999998765
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=187.71 Aligned_cols=197 Identities=22% Similarity=0.236 Sum_probs=144.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcC-cc----eEEEEeccc--------------------------CCCCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSD-VQ----EVYMGNVCQ--------------------------AGLGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~d-ID----~vivG~~~~--------------------------~~~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+++++ +| ++++|+..+ .......+..++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 35679999999999999999998 88 678886532 111234677889999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||..|+++|++|++|++||+|+|++... .
T Consensus 166 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~-~------------------------------ 212 (428)
T 3kzu_A 166 KLR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSR-I------------------------------ 212 (428)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH-H------------------------------
T ss_pred CCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCH-H------------------------------
Confidence 995 5999999999999999999999999999999999999985311 0
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
.+..+. ....+... ....+ -...+|+
T Consensus 213 ------------------~~~~~~-----------~~~~ls~~--------~~~~~-----------------~~~~~pf 238 (428)
T 3kzu_A 213 ------------------SLAGFA-----------ACKALSTE--------RNDDP-----------------TAASRPY 238 (428)
T ss_dssp ------------------HHHHHH-----------HTTCBCCS--------CTTSG-----------------GGTCCTT
T ss_pred ------------------HHHHHH-----------HccccccC--------ccCCc-----------------ccccCCc
Confidence 000000 00001000 00000 0011221
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Cc
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~s 683 (814)
++ ..|+..++|||+++||++++.|+++|.+|+++|+|++...+ .|...+.++..+++++|+++++ .+
T Consensus 239 -d~------~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~ 311 (428)
T 3kzu_A 239 -DE------DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPD 311 (428)
T ss_dssp -BT------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred -cc------CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 11 13667799999999999999999999999999999998764 5666667888999999999999 68
Q ss_pred ceeEehhh
Q psy12877 684 QFWYDENT 691 (814)
Q Consensus 684 q~~y~e~t 691 (814)
|++|+|-.
T Consensus 312 dId~ve~H 319 (428)
T 3kzu_A 312 EIDYINAH 319 (428)
T ss_dssp GCCEEECC
T ss_pred HeeEEEec
Confidence 99999853
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.71 E-value=5.5e-17 Score=183.46 Aligned_cols=192 Identities=24% Similarity=0.325 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCCC
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGLP 452 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl~ 452 (814)
.+|+.+|+++||+|+|+++++|| ++++|+..+.. .....+..++..+|+.
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 173 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN 173 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC
Confidence 47999999999999999999999 58888654320 0113577888899995
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
.|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. |. . +
T Consensus 174 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~------------------~------------~- 219 (430)
T 1ox0_A 174 --GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PF------------------A------------I- 219 (430)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH------------------H------------H-
T ss_pred --CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH------------------H------------H-
Confidence 599999999999999999999999999999999999998641 10 0 0
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQK 612 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~ 612 (814)
. .+. ..+.+. +++.+.. ..+| |++
T Consensus 220 -----------------~-----~~~------~~~~ls--------------------~~~~p~~-------~~~p-Fd~ 243 (430)
T 1ox0_A 220 -----------------A-----GFQ------ALTALS--------------------TTEDPTR-------ASIP-FDK 243 (430)
T ss_dssp -----------------H-----HHH------HTTCBC--------------------CCSSTTS-------SSCT-TBT
T ss_pred -----------------H-----HHH------hCCCcc--------------------CCCCCCC-------CCCC-CCC
Confidence 0 000 000000 0000000 0111 221
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
..|++.++|||+++||++++.|++.|.+++++|+|++...+ .|...+.+...+++++|+++++ .+||+
T Consensus 244 ------~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 317 (430)
T 1ox0_A 244 ------DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVA 317 (430)
T ss_dssp ------TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ------CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcC
Confidence 24677899999999999999999999999999999987654 3444566788899999999999 58999
Q ss_pred Eehh
Q psy12877 687 YDEN 690 (814)
Q Consensus 687 y~e~ 690 (814)
|.+-
T Consensus 318 ~ve~ 321 (430)
T 1ox0_A 318 YVNA 321 (430)
T ss_dssp CEEC
T ss_pred EEEE
Confidence 9873
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-17 Score=187.77 Aligned_cols=191 Identities=18% Similarity=0.200 Sum_probs=141.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC--------------------------CChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL--------------------------GQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~--------------------------~~~~a~~~a~~~G 450 (814)
+..+|+.+|+++||+|+|+++++|| ++++|+..+... ...++..++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 4678999999999999999999999 688887633210 2346788999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++|+++|+||+.||+.|+++|++|++|++||+|+|+|+..+.. .
T Consensus 171 l~--gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~-----------------------------~ 219 (428)
T 3mqd_A 171 IK--GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV-----------------------------L 219 (428)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-----------------------------H
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH-----------------------------H
Confidence 94 5999999999999999999999999999999999999998632110 0
Q ss_pred HHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 531 MGNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 531 mg~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
+ ...+. +++. ...|.+ ..+|
T Consensus 220 ~--------~~~~~ls~~~-------------~~~p~~-------------------------------------~~rp- 240 (428)
T 3mqd_A 220 F--------DAMGAMSSKY-------------NDTPST-------------------------------------ASRA- 240 (428)
T ss_dssp H--------HHTTCBCCTT-------------TTSGGG-------------------------------------SCCT-
T ss_pred H--------HHhhhhcccc-------------cCCccc-------------------------------------ccCc-
Confidence 0 00000 0000 000110 1112
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC---CCchHHhHHHHHHHhcCCCccee
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTLLKNGGQLSQFW 686 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~---~~~g~~~A~~~~~~~~~~~sq~~ 686 (814)
|+. ..|...++|||++|||++++.|+++|.+|+++|+|++..++.... .+.++..+++++|+ ++.+||+
T Consensus 241 fd~------~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~~dId 312 (428)
T 3mqd_A 241 YDK------NRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVTSKID 312 (428)
T ss_dssp TBT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCCSCCC
T ss_pred ccC------CCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCccccC
Confidence 111 124455999999999999999999999999999999988753322 46788899999999 5559999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|.|
T Consensus 313 ~ve 315 (428)
T 3mqd_A 313 YIN 315 (428)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-17 Score=176.49 Aligned_cols=176 Identities=18% Similarity=0.112 Sum_probs=134.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++++++..+|++ ..|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.++...
T Consensus 86 ~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------------- 145 (309)
T 2ebd_A 86 FPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAV------------------- 145 (309)
T ss_dssp SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGTC-------------------
T ss_pred CCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccccccc-------------------
Confidence 467999999999998 479999999999999999999999999999999999999976410
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
T Consensus 146 -------------------------------------------------------------------------------- 145 (309)
T 2ebd_A 146 -------------------------------------------------------------------------------- 145 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC--------CC-----CCC
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT--------EP-----IDF 236 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~--------~p-----~~~ 236 (814)
.|-...+++.++|||+|+||++.+.++ .|.+.....+ .| ...
T Consensus 146 -----------------~~~~~~~~~~~gdGaaA~vL~~~~~~~--------~i~~~~~~~~g~~~~~~~~p~~~~~~~~ 200 (309)
T 2ebd_A 146 -----------------DWEDRSTCVLFGDGAGAVVVTRSEDKS--------DILATRMYAEGSLEELLHADNCGYIRMK 200 (309)
T ss_dssp -----------------CTTCTTTTTTBCEEEEEEEEEECSSSC--------EEEEEEEEECGGGGGGEEECTTCCEEEC
T ss_pred -----------------CccchhhccccccccEEEEEEecCCCC--------ceeEEEEEecCCccceeEeCCCCeEEEc
Confidence 000012345688999999998765421 2333322211 01 000
Q ss_pred CC--------cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHH
Q psy12877 237 PI--------APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIH 308 (814)
Q Consensus 237 ~~--------~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e 308 (814)
+. ....+++++|+++|++++|||++++|.+++.......+.||++++++..+ +-.+||+.++++...+.+
T Consensus 201 g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~ 278 (309)
T 2ebd_A 201 GRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVN--IQKYGNTSAASIPIALHE 278 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HhhhcchHHHHHHHHHHH
Confidence 11 23568999999999999999999999999988888889999998766432 345899999999998888
Q ss_pred HHHH
Q psy12877 309 LCHA 312 (814)
Q Consensus 309 ~v~q 312 (814)
++++
T Consensus 279 ~~~~ 282 (309)
T 2ebd_A 279 AIKE 282 (309)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 8765
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.6e-17 Score=184.06 Aligned_cols=196 Identities=22% Similarity=0.279 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHHHHcCC-CCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANM-DKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl-~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+ +++++| ++++|+..+.. .....+..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 998898 69999764320 0124688899999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||+.|+++|++|++|++|++|+|+++..... ..+.
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-------------------~~~~------ 219 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV-------------------AGFS------ 219 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH-------------------HHHH------
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH-------------------HHHH------
Confidence 995 5999999999999999999999999999999999999987632110 0000
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
.|++ ++.+|+.+++ .. .+|
T Consensus 220 ~~~~----ls~~~~~~~~---------------------------------------------~~-----------~~p- 238 (431)
T 2ix4_A 220 RSRA----LSTKFNSSPQ---------------------------------------------EA-----------SRP- 238 (431)
T ss_dssp HTTC----BCCTTTTCGG---------------------------------------------GS-----------CCT-
T ss_pred hccc----cCccccCCcc---------------------------------------------cc-----------ccc-
Confidence 0000 0001111110 00 011
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Cc
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~s 683 (814)
|+ ...|++.++|||+++||++++.|+++|.+++++|+|++..++ .|...+.+...+++++|+++++ .+
T Consensus 239 fd------~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~ 312 (431)
T 2ix4_A 239 FD------CDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPN 312 (431)
T ss_dssp TB------TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred CC------CCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 11 124567799999999999999999999999999999998764 4544566788899999999999 68
Q ss_pred ceeEehh
Q psy12877 684 QFWYDEN 690 (814)
Q Consensus 684 q~~y~e~ 690 (814)
+++|.+-
T Consensus 313 dId~ve~ 319 (431)
T 2ix4_A 313 QIDYVNA 319 (431)
T ss_dssp GCCEEEC
T ss_pred HcCEEEE
Confidence 9999983
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.1e-17 Score=182.37 Aligned_cols=195 Identities=23% Similarity=0.271 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccC--------------------------CCCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQA--------------------------GLGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~--------------------------~~~~~~a~~~a~~~Gl 451 (814)
...|+.+|+++||+|||+++++|| ++++|+..+. ......+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 467999999999999999999999 5888865321 0122467788999999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
. .|.++++++|+||+.||+.|+++|++|++|++||+|+|+++.... ... +
T Consensus 168 ~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~-------------------~~~---------~ 217 (427)
T 3ho9_A 168 R--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLG-------------------VGG---------F 217 (427)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH-------------------HHH---------H
T ss_pred C--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH-------------------HHH---------H
Confidence 5 599999999999999999999999999999999999999862100 000 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
.. .+.+... ++. . -...+|+-.
T Consensus 218 --------~~------------------------~~~ls~~-------------------~~~-----~--~~~~~pfd~ 239 (427)
T 3ho9_A 218 --------GA------------------------ARALSTR-------------------NDN-----P--QAASRPWDK 239 (427)
T ss_dssp --------HH------------------------TTCBCCC-------------------TTC-----H--HHHCCTTBT
T ss_pred --------Hh------------------------ccCcccC-------------------CCC-----C--CcccCCccC
Confidence 00 0000000 000 0 001122211
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
..|...++|||++|||++++.|+++|.+|+++|+|++...+ .|...+.+...+++++|+++++ .+|+
T Consensus 240 -------~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 312 (427)
T 3ho9_A 240 -------ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQI 312 (427)
T ss_dssp -------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -------CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 12445599999999999999999999999999999998764 4555667888999999999999 6899
Q ss_pred eEehhh
Q psy12877 686 WYDENT 691 (814)
Q Consensus 686 ~y~e~t 691 (814)
+|.+-.
T Consensus 313 d~ve~H 318 (427)
T 3ho9_A 313 GYVNAH 318 (427)
T ss_dssp CEEECC
T ss_pred cEEEec
Confidence 999844
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=5e-17 Score=182.63 Aligned_cols=196 Identities=21% Similarity=0.286 Sum_probs=141.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
+..+|+.+|+++||+|+|+++++||. +++|+..+.. .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 35789999999999999999999995 6666543211 01246788888999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||+.|+++|++|++|++|++|+|.+.. |. . .
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~------------------~-----------~ 197 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PM------------------A-----------I 197 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH------------------H-----------H
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HH------------------H-----------H
Confidence 95 499999999999999999999999999999999999998531 10 0 0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
.+....+++..++.+++. ..+| |
T Consensus 198 ~~~~~~~~ls~~~~~p~~--------------------------------------------------------~~~p-f 220 (408)
T 1j3n_A 198 GAFAVMRALSTRNEEPEK--------------------------------------------------------ASRP-F 220 (408)
T ss_dssp HHHHHTTCBCCCTTCHHH--------------------------------------------------------HCCT-T
T ss_pred HHHHhcccccCCCCCCCc--------------------------------------------------------Cccc-C
Confidence 000000000001110000 0111 1
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
+ ...|+..++|||+++||++++.|++.|.+++++|+|++...+ .|...+.+...+++++|+++++ .+|
T Consensus 221 d------~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 294 (408)
T 1j3n_A 221 T------LSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQ 294 (408)
T ss_dssp B------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred c------CCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 1 013566799999999999999999999999999999997754 3444566778899999999999 589
Q ss_pred eeEehhh
Q psy12877 685 FWYDENT 691 (814)
Q Consensus 685 ~~y~e~t 691 (814)
++|.+-.
T Consensus 295 Id~ve~H 301 (408)
T 1j3n_A 295 VGYINAH 301 (408)
T ss_dssp CCEEECC
T ss_pred cCEEEEe
Confidence 9999744
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=180.78 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=142.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCc-c----eEEEEecccC--------------------------CCCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDV-Q----EVYMGNVCQA--------------------------GLGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dI-D----~vivG~~~~~--------------------------~~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+++++| | ++++|+..+. ......+..++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 356799999999999999999999 8 6888875321 11234577889999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||..|+++|++|++|+|||+|+|+++...
T Consensus 181 gl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~------------------------------- 227 (451)
T 4ddo_A 181 RFR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKV------------------------------- 227 (451)
T ss_dssp TCC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH-------------------------------
T ss_pred cCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHH-------------------------------
Confidence 994 59999999999999999999999999999999999999865210
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
.+. .+... .+.... |.++ .....+|+
T Consensus 228 ~~~-----------------------~~~~~-~~ls~~-~~~~-----------------------------~~~~~~pf 253 (451)
T 4ddo_A 228 SLG-----------------------GFAAA-RALSTG-FSEE-----------------------------PVRASRPF 253 (451)
T ss_dssp HHH-----------------------HHHHT-TCBCCS-CTTS-----------------------------GGGSCCTT
T ss_pred HHH-----------------------HHHHH-hhhccC-CCcC-----------------------------cccccccc
Confidence 000 00000 000000 1110 00111222
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC------CchHHhHHHHHHHhcCC-C
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------PIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~------~~g~~~A~~~~~~~~~~-~ 682 (814)
++ ..|++.++|||++|||++++.|+++|.+|+++|+|++...+ +..+ +.+...+++++|+++|+ .
T Consensus 254 -d~------~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d-~~~~~~~~~~~~~~~~ai~~al~~Agl~~ 325 (451)
T 4ddo_A 254 -DR------DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTAD-AYHMTAGPDDGSGAMRAMKLALRMGDVAP 325 (451)
T ss_dssp -BT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-CSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred -cc------CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecC-CCccCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 11 13667799999999999999999999999999999998764 3222 23557899999999999 5
Q ss_pred cceeEehhh
Q psy12877 683 SQFWYDENT 691 (814)
Q Consensus 683 sq~~y~e~t 691 (814)
+||+|++-.
T Consensus 326 ~dId~ve~H 334 (451)
T 4ddo_A 326 EQVDYVNAH 334 (451)
T ss_dssp GGCCEEECC
T ss_pred HHcCEEEec
Confidence 899999743
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-16 Score=178.58 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=143.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccC-----------------C---------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQA-----------------G---------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~-----------------~---------~~~~~a~~~a~~~G 450 (814)
+..+|+.+|+++||+|||+++++|| +|++|+..+. . .....+..++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3467999999999999999999999 8999976321 0 11234778999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+|++.||..|+++|++|++|+|||+|+|++..... .
T Consensus 153 l~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~------------------------------~ 200 (413)
T 3o04_A 153 AK--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS------------------------------L 200 (413)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH------------------------------H
T ss_pred CC--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH------------------------------H
Confidence 95 599999999999999999999999999999999999998642100 0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
. .+ ...+.+.... + .+. ..+| |
T Consensus 201 ~------------------------~~------~~~~~ls~~~------~----------p~~-----------~~~p-f 222 (413)
T 3o04_A 201 A------------------------GF------TANKALSLNP------D----------PET-----------ACRP-F 222 (413)
T ss_dssp H------------------------HH------HHTTCBCCCC------C----------TTT-----------SCCT-T
T ss_pred H------------------------HH------HhcccccCCC------C----------CCC-----------CcCC-C
Confidence 0 00 0001111000 0 000 0111 1
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
++ ..|+..++|||++|||++++.|+++|.+|+++|+|++...+ .|...+.+...+++++|+++++ .+|
T Consensus 223 d~------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~d 296 (413)
T 3o04_A 223 DK------DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDK 296 (413)
T ss_dssp BT------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred cC------CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 11 12455699999999999999999999999999999998764 3444455678899999999999 689
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
++|++-
T Consensus 297 Id~ve~ 302 (413)
T 3o04_A 297 VDYINA 302 (413)
T ss_dssp CCEEEC
T ss_pred cCEEEE
Confidence 999985
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.67 E-value=6.2e-17 Score=175.29 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=133.0
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+++++..+|++ ..|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 87 ~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~------------------ 147 (313)
T 1zow_A 87 FPTVANMLQERLGTG-KVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITD------------------ 147 (313)
T ss_dssp SSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTCC------------------
T ss_pred CCcHHHHHHHHhCCC-CCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccccC------------------
Confidence 457899999999997 4899999999999999999999999999999999999999764100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+
T Consensus 148 -------~------------------------------------------------------------------------ 148 (313)
T 1zow_A 148 -------L------------------------------------------------------------------------ 148 (313)
T ss_dssp -------T------------------------------------------------------------------------
T ss_pred -------c------------------------------------------------------------------------
Confidence 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----C---CC-----CC
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----E---PI-----DF 236 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~---p~-----~~ 236 (814)
+ + ..++..++|||+|+||++.+.. . .|.+....++ . |. .+
T Consensus 149 ------------~----d---~~~~~~~gdGa~A~vl~~~~~~----~----~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (313)
T 1zow_A 149 ------------T----D---RSTAVLFGDGAGAVIIGEVSEG----R----GIISYEMGSDGTGGKHLYLDKDTGKLKM 201 (313)
T ss_dssp ------------T----C---HHHHTTBCEEEEEEEEEECSTT----C----EEEEEEEEECGGGGGGEEECTTTCCEEE
T ss_pred ------------c----c---ccceeeeccceEEEEEEecCCC----C----ceeEEEEEEcCCCcCeEEecCCCCeeEe
Confidence 0 0 0013347799999999865431 1 3444322111 0 11 00
Q ss_pred -C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHH
Q psy12877 237 -P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVI 307 (814)
Q Consensus 237 -~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~ 307 (814)
+ .....+++++|+++|++++|||+|++|.+++...-...+.||++++++..+ +-.+||+.++++...+.
T Consensus 202 ~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~ 279 (313)
T 1zow_A 202 NGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSID 279 (313)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHH
Confidence 1 133568999999999999999999999999998888889999998766432 34589999999998888
Q ss_pred HHHHH
Q psy12877 308 HLCHA 312 (814)
Q Consensus 308 e~v~q 312 (814)
+++++
T Consensus 280 ~~~~~ 284 (313)
T 1zow_A 280 QELKN 284 (313)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 87665
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=176.75 Aligned_cols=194 Identities=20% Similarity=0.278 Sum_probs=144.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
...+|+.+|+++||+|||+++++|| +|++|+..+.. .....+..++..+|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 3567999999999999999999999 99999765420 01246888999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. |. ....
T Consensus 177 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~------------------~~~~--------- 226 (437)
T 2gqd_A 177 AK--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HM------------------AIAG--------- 226 (437)
T ss_dssp CC--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH------------------HHHH---------
T ss_pred CC--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH------------------HHHH---------
Confidence 95 499999999999999999999999999999999999998642 10 0000
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
+ .. .+.+.. ++.+. ...+| |
T Consensus 227 ~--------~~------------------------~~~ls~--------------------~~~p~-------~~~~p-f 246 (437)
T 2gqd_A 227 F--------SA------------------------SRALST--------------------NDDIE-------TACRP-F 246 (437)
T ss_dssp H--------HH------------------------TTCBCC--------------------CCCTT-------TSSCT-T
T ss_pred H--------Hh------------------------ccCccC--------------------CCCCc-------cccCC-C
Confidence 0 00 000000 00000 01223 2
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
++ ..|++.++|||++|||++++.|+++|.+++++|+|++...+. |...+.+...+++++|+++++ .+|
T Consensus 247 d~------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (437)
T 2gqd_A 247 QE------GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320 (437)
T ss_dssp CT------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred CC------CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhh
Confidence 21 146777999999999999999999999999999999987664 333345667899999999999 589
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
|+|.+-
T Consensus 321 Id~ve~ 326 (437)
T 2gqd_A 321 VQYLNA 326 (437)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 999984
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=172.40 Aligned_cols=205 Identities=18% Similarity=0.100 Sum_probs=145.6
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++++++..+|+ .+|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 86 ~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~------------------ 145 (322)
T 1ub7_A 86 FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIID------------------ 145 (322)
T ss_dssp ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTSC------------------
T ss_pred CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhccccC------------------
Confidence 35689999999999 6899999999999999999999999999999999999999764100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+
T Consensus 146 -------~------------------------------------------------------------------------ 146 (322)
T 1ub7_A 146 -------W------------------------------------------------------------------------ 146 (322)
T ss_dssp -------T------------------------------------------------------------------------
T ss_pred -------h------------------------------------------------------------------------
Confidence 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEE-EEEEEecCC----------CCCC--
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARI-IAYFDAATE----------PIDF-- 236 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I-~g~~~~~~~----------p~~~-- 236 (814)
+ + ..++..++|||+|+||.+.+. +.+.++.+ .+.+...+. |...
T Consensus 147 ------------~----d---~~~~~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~ 203 (322)
T 1ub7_A 147 ------------N----D---RATAVLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSM 203 (322)
T ss_dssp ------------T----C---HHHHTTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBC
T ss_pred ------------h----h---cccceeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccc
Confidence 0 0 011234779999999987643 11222222 222111110 2210
Q ss_pred -------C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCCh
Q psy12877 237 -------P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMS 301 (814)
Q Consensus 237 -------~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gas 301 (814)
+ .....+++++|+++|++++|||+|+.|.+++...-...+.||++++++..+ +-.+||..+++
T Consensus 204 ~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As 281 (322)
T 1ub7_A 204 KNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVN--VDRYGNTSTAS 281 (322)
T ss_dssp CSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGH
T ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHHH--HHhhCcHHHHH
Confidence 1 134568999999999999999999999999888777889999988776532 33589999999
Q ss_pred HHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 302 GARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 302 G~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+...+.+++++-+- +++.+ .+.++.|+...+++|+.|
T Consensus 282 ~~~~l~~~l~~g~~~~g~~~l----------------~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 282 IPLALKEAVDAGRIREGDHVL----------------LVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp HHHHHHHHHHHTSSCTTCEEE----------------EEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCCCCCEEE----------------EEEEChhheeEEEEEEeC
Confidence 99877776554211 22222 233666778888888764
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=6.1e-16 Score=174.16 Aligned_cols=193 Identities=19% Similarity=0.190 Sum_probs=141.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
+..+|+.+++++||+|+|+++++|| ++++|+..+.. .....+..++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4578999999999999999999999 78888763321 12457888999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc-ccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~-s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
+. .|.++++++|+||+.||+.|+++|++| +|++|++|+|.+ +...+
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~------------------------------ 204 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGW------------------------------ 204 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHH------------------------------
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHH------------------------------
Confidence 95 589999999999999999999999999 999999999984 31100
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
. .+ ...+.+.. .+ +.|.. .+|
T Consensus 205 -~------------------------~~------~~~~~ls~-------~~---------~~~~~-----------~~p- 225 (415)
T 1tqy_B 205 -V------------------------SQ------IASGRIST-------AT---------DPDRA-----------YLP- 225 (415)
T ss_dssp -H------------------------HH------HTTSCBCC-------CS---------CGGGS-----------CCT-
T ss_pred -H------------------------HH------HhccCccC-------CC---------CCCCC-----------cCC-
Confidence 0 00 00000000 00 00000 111
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCC-CceEEEEEeeeccCCCCCCCc--hHHhHHHHHHHhcCC-Ccce
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATEPIDFPI--APAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~-~p~a~I~g~~~~~~~p~~~~~--g~~~A~~~~~~~~~~-~sq~ 685 (814)
|++ ..|.+.++|||+++||++++.|+++|. +++++|+|++...+....... +...+++++|+++++ .+||
T Consensus 226 fd~------~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 226 FDE------RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp TST------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred CCC------CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 111 136778999999999999999999999 999999999987663221111 778899999999999 5899
Q ss_pred eEehhh
Q psy12877 686 WYDENT 691 (814)
Q Consensus 686 ~y~e~t 691 (814)
+|.+-.
T Consensus 300 d~ve~H 305 (415)
T 1tqy_B 300 DVVFAD 305 (415)
T ss_dssp CEEECC
T ss_pred CEEEEe
Confidence 999843
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.65 E-value=7.2e-16 Score=174.56 Aligned_cols=193 Identities=22% Similarity=0.241 Sum_probs=144.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCC-cCcc----eEEEEecccCC--------------------------CCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDK-SDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~-~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+++ ++|| +|++|+..+.. .....+..++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356799999999999999998 8888 68999764321 1234788899999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.. ...
T Consensus 176 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~------------------~~~-------- 226 (438)
T 2iwz_A 176 KLK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLS------------------LAG-------- 226 (438)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH------------------HHH--------
T ss_pred CCC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHH------------------HHH--------
Confidence 995 499999999999999999999999999999999999998532 110 000
Q ss_pred cHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
+ ...|. ++. .+|.+ ..+|
T Consensus 227 -~--------~~~~~ls~~---------------~~p~~-------------------------------------~~~p 245 (438)
T 2iwz_A 227 -F--------SRARALSTN---------------SDPKL-------------------------------------ACRP 245 (438)
T ss_dssp -H--------HHTTCBCCC---------------SCTTT-------------------------------------SCCT
T ss_pred -H--------HhcCCcCCC---------------CCCCc-------------------------------------cccc
Confidence 0 00000 000 00110 1122
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-C
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~ 682 (814)
|++ ..|.+.++|||+++||++++.|+++|.+++++|+|++..++. |...+.+...+++++|+++++ .
T Consensus 246 -fd~------~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p 318 (438)
T 2iwz_A 246 -FHP------KRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQP 318 (438)
T ss_dssp -TCT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred -CCC------CCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 221 124567999999999999999999999999999999987664 444556778899999999999 5
Q ss_pred cceeEehh
Q psy12877 683 SQFWYDEN 690 (814)
Q Consensus 683 sq~~y~e~ 690 (814)
+||+|.+-
T Consensus 319 ~dId~ve~ 326 (438)
T 2iwz_A 319 EEISYINA 326 (438)
T ss_dssp GGCCEEEC
T ss_pred HHcCEEEe
Confidence 89999984
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.65 E-value=3.7e-16 Score=175.29 Aligned_cols=189 Identities=16% Similarity=0.183 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce-----EEEEecccCC-------------C--------------CChHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE-----VYMGNVCQAG-------------L--------------GQAPCRQAVIFA 449 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~-----vivG~~~~~~-------------~--------------~~~~a~~~a~~~ 449 (814)
..+|+.+++++||+|||++++++|. |++|+..+.. . ....+..++..+
T Consensus 71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 150 (406)
T 2vba_A 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence 5679999999999999999988886 9999775431 1 124678888889
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||+.|+++|++|++|++||+|+|.++.... ..
T Consensus 151 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~-------------------~~--------- 200 (406)
T 2vba_A 151 KIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-------------------CE--------- 200 (406)
T ss_dssp TCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-------------------HH---------
T ss_pred cCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHH-------------------HH---------
Confidence 994 599999999999999999999999999999999999999753100 00
Q ss_pred cHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
+ .+.|. +++ + ..+|.+. .||
T Consensus 201 -~--------~~~~~ls~~----------~---~~~p~~~-------------------------------------~~p 221 (406)
T 2vba_A 201 -F--------DAMGALSTK----------Y---NDTPEKA-------------------------------------SRT 221 (406)
T ss_dssp -H--------HHTTCBCCS----------C---TTSGGGS-------------------------------------CCT
T ss_pred -H--------hhccccccc----------c---CCCCccc-------------------------------------cCc
Confidence 0 11111 000 0 0011111 111
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCCCc
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQLS 683 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~~s 683 (814)
|++ ..|...++|||+++||++++.|+++|.+++++|+|++...+. |. +.+...+++++|++++ +
T Consensus 222 -fd~------~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag--~ 290 (406)
T 2vba_A 222 -YDA------HRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD--T 290 (406)
T ss_dssp -TBT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC--S
T ss_pred -CcC------CCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC--C
Confidence 211 134566999999999999999999999999999999987662 32 5577889999999999 9
Q ss_pred ceeEehh
Q psy12877 684 QFWYDEN 690 (814)
Q Consensus 684 q~~y~e~ 690 (814)
|++|.+-
T Consensus 291 dId~ve~ 297 (406)
T 2vba_A 291 PIDYLNS 297 (406)
T ss_dssp CCCEEEC
T ss_pred CccEEEe
Confidence 9999985
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-16 Score=177.34 Aligned_cols=193 Identities=19% Similarity=0.204 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC--------------------------CChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL--------------------------GQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~--------------------------~~~~a~~~a~~~Gl 451 (814)
..+|+.+++++||+|||+ +++| +|++|+..+... ....+..++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 457999999999999998 4555 388887654221 11357788889999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
. .|.++++++|+||+.||+.|+++|++|++|++|++|+|.++.... ..
T Consensus 161 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~------------------------------~~ 208 (416)
T 2wge_A 161 R--AGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP------------------------------IA 208 (416)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH------------------------------HH
T ss_pred C--CCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH------------------------------HH
Confidence 4 699999999999999999999999999999999999998753100 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
+. ...+.+.. +... .|.. .+| |+
T Consensus 209 ~~------------------------------~~~~~l~~---------~~~~------~~~~-----------~~p-fd 231 (416)
T 2wge_A 209 AF------------------------------SMMRAMST---------RNDE------PERA-----------SRP-FD 231 (416)
T ss_dssp HH------------------------------HTTTCBCC---------CTTS------GGGS-----------CCT-TB
T ss_pred HH------------------------------Hhcchhhc---------cccC------Cccc-----------ccc-cc
Confidence 00 00000100 0000 0000 111 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
...|++.++|||+++||++++.|+++|.+|+++|+|++...+ .|...+.++..+++++|+++++ .+|+
T Consensus 232 ------~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 305 (416)
T 2wge_A 232 ------KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADI 305 (416)
T ss_dssp ------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ------cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHC
Confidence 124677899999999999999999999999999999997763 4555667888999999999998 6899
Q ss_pred eEehhh
Q psy12877 686 WYDENT 691 (814)
Q Consensus 686 ~y~e~t 691 (814)
+|.|-.
T Consensus 306 d~ve~H 311 (416)
T 2wge_A 306 DHVNAH 311 (416)
T ss_dssp CEEECC
T ss_pred CEEEEC
Confidence 999833
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.4e-16 Score=173.65 Aligned_cols=191 Identities=18% Similarity=0.144 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---CcCcceEEEEecccCCC--------------------------CChHHHHHHHHcCCC
Q psy12877 402 ATKLGAVAIESAIQKANMD---KSDVQEVYMGNVCQAGL--------------------------GQAPCRQAVIFAGLP 452 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~---~~dID~vivG~~~~~~~--------------------------~~~~a~~~a~~~Gl~ 452 (814)
..+|+.+++++||+|||++ +++| ++++|+..+... ....+..++..+|+.
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~ 177 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK 177 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC
Confidence 4679999999999999983 3333 578887643210 113577889999994
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
.|.++++++|+|++.||..|+++|++|++|++|++|+|.++....
T Consensus 178 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--------------------------------- 222 (434)
T 2gp6_A 178 --AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVP--------------------------------- 222 (434)
T ss_dssp --SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHH---------------------------------
T ss_pred --CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------------------
Confidence 599999999999999999999999999999999999998753100
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHH----hhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSAD----AYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~----a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
++..++.++.. .+|.+ . .+|
T Consensus 223 -------------------~~~~~~~~~~ls~~~~~p~~----~---------------------------------~~p 246 (434)
T 2gp6_A 223 -------------------IAGFAQMRIVMSTNNDDPAG----A---------------------------------CRP 246 (434)
T ss_dssp -------------------HHHHHTTTSSCCCCTTCTTT----S---------------------------------CCS
T ss_pred -------------------HHHHHHHHHHhcCCCCCCCC----c---------------------------------eec
Confidence 00000000000 01111 0 011
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-C
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~ 682 (814)
|+ ...|++.++|||+++||++++.|++.|.+++++|+|++...+ .|...+.+...+++++|+++++ .
T Consensus 247 -fd------~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~ 319 (434)
T 2gp6_A 247 -FD------RDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAP 319 (434)
T ss_dssp -SB------TTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCT
T ss_pred -cc------ccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCH
Confidence 11 013566799999999999999999999999999999997764 3444556778899999999999 6
Q ss_pred cceeEehhh
Q psy12877 683 SQFWYDENT 691 (814)
Q Consensus 683 sq~~y~e~t 691 (814)
+|++|.+-.
T Consensus 320 ~dId~ve~H 328 (434)
T 2gp6_A 320 GDIDHVNAH 328 (434)
T ss_dssp TTEEEEECC
T ss_pred HHcCEEEEe
Confidence 899999854
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.1e-16 Score=170.50 Aligned_cols=172 Identities=17% Similarity=0.103 Sum_probs=126.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++.+++..+|++ .+|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|...
T Consensus 97 ~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~------------------- 156 (335)
T 1u6e_A 97 TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTI------------------- 156 (335)
T ss_dssp SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGGC-------------------
T ss_pred CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccccc-------------------
Confidence 467899999999997 689999999999999999999999999999999999999976310
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
T Consensus 157 -------------------------------------------------------------------------------- 156 (335)
T 1u6e_A 157 -------------------------------------------------------------------------------- 156 (335)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-------------CCCC-
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-------------EPID- 235 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-------------~p~~- 235 (814)
.|....+++.++|||+|+||.+.+. .+..+. .+.+.+.... +|..
T Consensus 157 -----------------~~~d~~~~~~~gDGA~A~vl~~~~~---~~i~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 215 (335)
T 1u6e_A 157 -----------------DMYDRGNCFIFADGAAAVVVGETPF---QGIGPT-VAGSDGEQADAIRQDIDWITFAQNPSGP 215 (335)
T ss_dssp -----------------CTTCTTTTTTBCEEEEEEEEEECSS---CCBCCC-EEEECGGGGGGEEESSCHHHHHTSTTSC
T ss_pred -----------------CccccccceEeccccEEEEEEecCC---CCeeEE-EEEEcCCcccceeecCCccCcCCCccCc
Confidence 0001124567889999999987543 122121 2222221100 1110
Q ss_pred ---C---C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC-CcccCCCCccccCCCCC
Q psy12877 236 ---F---P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS-KVNVHGGAVSLGHPIGM 300 (814)
Q Consensus 236 ---~---~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~-~vN~~GG~la~Ghp~ga 300 (814)
+ + .....+++++|+++|++++|||+|++|++++.......+.||++++ ++..+ .--+||+.++
T Consensus 216 ~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sA 293 (335)
T 1u6e_A 216 RPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAA 293 (335)
T ss_dssp CCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGG
T ss_pred cceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHH
Confidence 0 1 1224689999999999999999999999999999999999999988 55443 2347998887
Q ss_pred hHHH
Q psy12877 301 SGAR 304 (814)
Q Consensus 301 sG~~ 304 (814)
+...
T Consensus 294 s~~~ 297 (335)
T 1u6e_A 294 SIPL 297 (335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.8e-15 Score=170.82 Aligned_cols=194 Identities=19% Similarity=0.211 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------CC-----------C--h-HHH----HH
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------LG-----------Q--A-PCR----QA 445 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------~~-----------~--~-~a~----~~ 445 (814)
..+|+.+++++||+|||+++++|| +|++|+..+.. .+ . + .+. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 467999999999999999999999 69999764321 00 0 1 133 78
Q ss_pred HHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccc
Q psy12877 446 VIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDV 525 (814)
Q Consensus 446 a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (814)
+..+|+. .|.++++++|+|++.||+.|+++|++|++|++||+|+|.+.. |. ...
T Consensus 153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~------------------~~~----- 206 (424)
T 1tqy_A 153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PI------------------VVA----- 206 (424)
T ss_dssp HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH------------------HHH-----
T ss_pred HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HH------------------HHH-----
Confidence 8889995 599999999999999999999999999999999999998632 11 000
Q ss_pred cccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhc
Q psy12877 526 YNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKS 605 (814)
Q Consensus 526 ~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~ 605 (814)
.+ ...+.-. .+ ..+|.+ .
T Consensus 207 ----~~--------~~~~~ls----------~~---~~~p~~--------------------------~----------- 224 (424)
T 1tqy_A 207 ----CF--------DAIRATT----------AR---NDDPEH--------------------------A----------- 224 (424)
T ss_dssp ----HH--------HHTTCBC----------CC---CSCGGG--------------------------C-----------
T ss_pred ----HH--------Hhhcccc----------CC---CCCCCC--------------------------C-----------
Confidence 00 0000000 00 001111 0
Q ss_pred cccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcC
Q psy12877 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGG 680 (814)
Q Consensus 606 ~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~ 680 (814)
.|| |++ ..|++.++|||++|||++++.|++.|.+++++|+|++...+. |...+.+...+++++|++++
T Consensus 225 ~rp-fd~------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ag 297 (424)
T 1tqy_A 225 SRP-FDG------TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESR 297 (424)
T ss_dssp CCT-TBT------TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHT
T ss_pred ccC-CCC------CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 112 211 146777999999999999999999999999999999987653 44445667889999999999
Q ss_pred C-CcceeEehh
Q psy12877 681 Q-LSQFWYDEN 690 (814)
Q Consensus 681 ~-~sq~~y~e~ 690 (814)
+ .+||+|.+-
T Consensus 298 l~~~dId~ve~ 308 (424)
T 1tqy_A 298 TDATDIDYINA 308 (424)
T ss_dssp CCGGGCCEEEC
T ss_pred CCHHHCCEEEe
Confidence 9 589999984
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-14 Score=191.90 Aligned_cols=241 Identities=14% Similarity=0.115 Sum_probs=171.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
...++..++..+|| .+|+++|+++|+|++.||++|++.|++|+||++||||++.+.....
T Consensus 137 ~~~~a~ris~~~~l--~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~------------------ 196 (2512)
T 2vz8_A 137 RAMMANRLSFFFDF--KGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNS------------------ 196 (2512)
T ss_dssp TTHHHHHHHHHHTC--CSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHH------------------
T ss_pred hhHHHHHHHHHhCC--CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHH------------------
Confidence 34588899999999 6999999999999999999999999999999999999998654100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+...+ ..+. +.+|.
T Consensus 197 ----------------------------------~~~~~--------~~~~-------------------ls~~g----- 210 (2512)
T 2vz8_A 197 ----------------------------------SLQFM--------KLGM-------------------LSQDG----- 210 (2512)
T ss_dssp ----------------------------------HHHHH--------HTTC-------------------BCTTC-----
T ss_pred ----------------------------------HHHHc--------cCCC-------------------CCCCC-----
Confidence 00000 0111 11221
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-C-----CCcHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-F-----PIAPAFA 243 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-~-----~~~~~~a 243 (814)
+++|+..+.+|++ .+||+++|||.+.+.|+ +++|.|+|++.+.+.... . +.+...+
T Consensus 211 -------~c~~Fd~~adG~~-------~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~ 272 (2512)
T 2vz8_A 211 -------TCRSFDAEGTGYC-------RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQL 272 (2512)
T ss_dssp -------SCCSSSTTCCCBC-------BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHH
T ss_pred -------CCCCCCCCCCCcc-------eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHH
Confidence 3445554445666 66999999999999885 589999999998775321 1 2234679
Q ss_pred HHHHHHHcCCCCCCccEEecCCCchHH----HH-HHhhhcCCCC-CCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 244 IPTLLKNGGVAKQDVALWEINEAFSVV----VL-ANIKKLDIDP-SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 244 ~~~al~~aGl~~~DID~~e~~d~fa~~----~l-~~~e~lg~~~-~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
++++|++||++|+||||+|.|.+-+.. +. ...+.||-.. +|+-+..-+-.+||..||+|+..++.++..|++
T Consensus 273 i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ 352 (2512)
T 2vz8_A 273 IRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGV 352 (2512)
T ss_dssp HHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTB
T ss_pred HHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCC
Confidence 999999999999999999999987742 22 2334455322 345454445558999999999999999999997
Q ss_pred --CCCCCcc----c-cccC-------ccc--cccccceeEEecCCcceeEEEecC
Q psy12877 316 --GQKGQLS----Q-FWYD-------ENT--TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g~~gl~~----~-~~~~-------~~~--~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+.. + .|.. ..+ ..+++.++.++.||.+.+++||.+
T Consensus 353 ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 353 WAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp CCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 1212111 1 0110 011 123677888888999999999854
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=177.39 Aligned_cols=190 Identities=21% Similarity=0.225 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCCC-------------------CChHHHHHHHHcCCCCCccEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAGL-------------------GQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~~-------------------~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
...|+.+++.+||+|||++++++|. |++|+...... ...++..++..+|+. .|.+
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeE
Confidence 3569999999999999999999995 88887644321 013577889999995 5999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+++++|+|++.||+.|+++|++|++|++|+||+|.++..... .
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~------------------------------~------- 236 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAF------------------------------T------- 236 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHH------------------------------H-------
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhh------------------------------H-------
Confidence 999999999999999999999999999999999998632100 0
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt 618 (814)
. + ...+. + +.|. ..+| |+ +
T Consensus 237 --~----------~-----------~~~~~----l----------------s~~g-----------~~~p-Fd------~ 255 (917)
T 2hg4_A 237 --E----------F-----------RSQGG----L----------------AADG-----------RCKP-FS------K 255 (917)
T ss_dssp --H----------H-----------TTSSC----B----------------CTTS-----------CCCT-TB------T
T ss_pred --h----------h-----------hhccC----c----------------CCcc-----------ccCc-cc------c
Confidence 0 0 00000 0 0010 0111 21 2
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC-----CchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-----PIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~-----~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
..|++.++|||++|||.+.+.|++.|.+++++|+|++...+..... +.+...+++++|+++|+ .++|+|.|-.
T Consensus 256 ~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaH 334 (917)
T 2hg4_A 256 AADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAH 334 (917)
T ss_dssp TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred cccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeec
Confidence 4678889999999999999999999999999999999876644322 23455799999999999 6899999843
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.1e-15 Score=158.95 Aligned_cols=179 Identities=17% Similarity=0.113 Sum_probs=130.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++++++..+|++ ..|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 87 ~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~------------------ 147 (317)
T 1hnj_A 87 FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCD------------------ 147 (317)
T ss_dssp SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHSC------------------
T ss_pred CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC------------------
Confidence 457999999999997 4899999999999999999999999999999999999998653100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+ +
T Consensus 148 -------~-----------------------------------------------------------------~------ 149 (317)
T 1hnj_A 148 -------P-----------------------------------------------------------------T------ 149 (317)
T ss_dssp -------T-----------------------------------------------------------------T------
T ss_pred -------c-----------------------------------------------------------------h------
Confidence 0 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEE-EEEecC---CCCC----------
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA-YFDAAT---EPID---------- 235 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g-~~~~~~---~p~~---------- 235 (814)
+ ..++..++|||+|+||.+.+. ...++.+.+ .+...+ -|..
T Consensus 150 -----------------d---~~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 204 (317)
T 1hnj_A 150 -----------------D---RGTIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIH 204 (317)
T ss_dssp -----------------C---HHHHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCS
T ss_pred -----------------h---cccceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCce
Confidence 0 001223679999999986542 123444433 221111 1110
Q ss_pred ---CCC--------cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHH
Q psy12877 236 ---FPI--------APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGAR 304 (814)
Q Consensus 236 ---~~~--------~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~ 304 (814)
.+. ....+++++|+++|++++|||+|+.|...+...-...+.||++++++..+ .-.+||..++++..
T Consensus 205 ~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~--~~~~Gn~~~As~~~ 282 (317)
T 1hnj_A 205 LTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPC 282 (317)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHH
T ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHhh--HhhhCcHHHHHHHH
Confidence 011 23568999999999999999999999999988777889999988776321 22489999888887
Q ss_pred HHHHHHHH
Q psy12877 305 IVIHLCHA 312 (814)
Q Consensus 305 ~l~e~v~q 312 (814)
.+.+++.+
T Consensus 283 ~L~~~~~~ 290 (317)
T 1hnj_A 283 ALDEAVRD 290 (317)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77666543
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=175.22 Aligned_cols=190 Identities=16% Similarity=0.148 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCCC------------------CChHHHHHHHHcCCCCCccEEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAGL------------------GQAPCRQAVIFAGLPKSTVCTT 459 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~~------------------~~~~a~~~a~~~Gl~~~~~~~t 459 (814)
..+|+.+++.+||+|||+++++||. |++|+...... ....+..++..+|+. .|.++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE--GPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC--SCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC--CCEEE
Confidence 4679999999999999999999995 88887644321 113677899999995 59999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHH
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~ 539 (814)
++++|+|++.||+.|+++|++|++|++|++|+|.++.... +.+ .
T Consensus 173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~------------------------------~~~------~ 216 (915)
T 2qo3_A 173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV------------------------------FVD------F 216 (915)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH------------------------------HHH------H
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH------------------------------HHH------H
Confidence 9999999999999999999999999999999998863110 000 0
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCcccc
Q psy12877 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTA 619 (814)
Q Consensus 540 ~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~ 619 (814)
.+.|. ..|.+.. +| |+. .
T Consensus 217 ~~~~~------------------ls~~g~~-------------------------------------~~-Fd~------~ 234 (915)
T 2qo3_A 217 SRQRA------------------LAADGRS-------------------------------------KA-FGA------G 234 (915)
T ss_dssp HTTTC------------------BCSSCCC-------------------------------------CT-TBT------T
T ss_pred hhhcc------------------cCCCCCc-------------------------------------cc-ccC------C
Confidence 00000 0011111 11 221 1
Q ss_pred CCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-----CCchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 620 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 620 ~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
.|+..++|||++|||.+.+.|++.|.+++++|+|++...+.... .+.+...+++++|+++|+ .++|+|.|-.
T Consensus 235 adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~H 312 (915)
T 2qo3_A 235 ADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAH 312 (915)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECC
T ss_pred CCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEec
Confidence 35677999999999999999999999999999999977643221 224567899999999999 6899999844
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.8e-15 Score=161.79 Aligned_cols=177 Identities=18% Similarity=0.222 Sum_probs=128.7
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
++.+.+++..+|++ .+|+++++++|+|++.||..|+++|++|.+|+|||+|+|.+|....
T Consensus 88 p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~~------------------- 147 (331)
T 2x3e_A 88 PATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSHTLD------------------- 147 (331)
T ss_dssp SCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC-------------------
T ss_pred ChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccccCCC-------------------
Confidence 45789999999997 4899999999999999999999999999999999999999763100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+.+ +
T Consensus 148 ---~~d---------------------~---------------------------------------------------- 151 (331)
T 2x3e_A 148 ---PAD---------------------R---------------------------------------------------- 151 (331)
T ss_dssp ---TTC---------------------H----------------------------------------------------
T ss_pred ---ccc---------------------c----------------------------------------------------
Confidence 000 0
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC----C----CC--------
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----E----PI-------- 234 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~----~----p~-------- 234 (814)
.++..++|||+|+||.+.+.|+ +. .|.+.....+ + |.
T Consensus 152 ---------------------~~~~~~GdGA~A~vL~~~~~a~--~~----~i~~~~~~~dg~~~~~~~~p~~~~~~p~~ 204 (331)
T 2x3e_A 152 ---------------------STRALFGDGAGAVVLRAGDAEE--EG----ALLAFDLGSDGHQFDLLMTPAVSRAERSS 204 (331)
T ss_dssp ---------------------HHHHHBCCEEEEEEEEEECTTS--TT----BEEEEEEEECGGGTTSEEEECCCHHHHHH
T ss_pred ---------------------ccceeeccccEEEEEEecCCCC--CC----ceEEEEEEEcCCCCCeEEecCCCCCCCCc
Confidence 0012367999999998765431 11 2333322111 0 00
Q ss_pred ----C-C---C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCC
Q psy12877 235 ----D-F---P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298 (814)
Q Consensus 235 ----~-~---~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~ 298 (814)
. + + .....+++++|+++|++++|||+|..|.+.+...-...+.||++++++..+ .-.+||..
T Consensus 205 ~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~ 282 (331)
T 2x3e_A 205 GQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSN--IAEVGNTV 282 (331)
T ss_dssp TCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCG
T ss_pred cCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhhh--HhhhCcHH
Confidence 0 0 0 123468999999999999999999999999988888889999988765432 23589998
Q ss_pred CChHHHHHHHHHHH
Q psy12877 299 GMSGARIVIHLCHA 312 (814)
Q Consensus 299 gasG~~~l~e~v~q 312 (814)
+++....+.+++.+
T Consensus 283 sAs~~~~L~~~~~~ 296 (331)
T 2x3e_A 283 AASIPLALAHGLRQ 296 (331)
T ss_dssp GGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 88877766666543
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-14 Score=157.05 Aligned_cols=179 Identities=15% Similarity=0.047 Sum_probs=129.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+.+++..+|++ .+|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 96 ~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~------------------ 156 (339)
T 1mzj_A 96 TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVID------------------ 156 (339)
T ss_dssp SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGGSC------------------
T ss_pred CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccccccC------------------
Confidence 456899999999997 4899999999999999999999999999999999999999763100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
++
T Consensus 157 ------------------------------------------------------------------------~~------ 158 (339)
T 1mzj_A 157 ------------------------------------------------------------------------LA------ 158 (339)
T ss_dssp ------------------------------------------------------------------------SS------
T ss_pred ------------------------------------------------------------------------cc------
Confidence 00
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccE-EEEEEEEecCC-------CCC------
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA-RIIAYFDAATE-------PID------ 235 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a-~I~g~~~~~~~-------p~~------ 235 (814)
+ ..++..++|||+|+||.+.+. .+.++ .+.+.+...+. |..
T Consensus 159 -----------------d---~~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~ 213 (339)
T 1mzj_A 159 -----------------D---RSLSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSV 213 (339)
T ss_dssp -----------------C---TTTTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSS
T ss_pred -----------------c---cccceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCccccccc
Confidence 0 012334789999999986542 12222 12232221110 100
Q ss_pred ---C----C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC-CcccCCCCccccCCCC
Q psy12877 236 ---F----P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS-KVNVHGGAVSLGHPIG 299 (814)
Q Consensus 236 ---~----~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~-~vN~~GG~la~Ghp~g 299 (814)
+ + .....+++++|+++|++++|||+|..|...+...-...+.||++.+ ++-.+ .-.+||..+
T Consensus 214 ~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~s 291 (339)
T 1mzj_A 214 GRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSS 291 (339)
T ss_dssp CSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTT
T ss_pred ccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHH
Confidence 0 0 1234689999999999999999999999998877778899999887 66321 234899998
Q ss_pred ChHHHHHHHHHHH
Q psy12877 300 MSGARIVIHLCHA 312 (814)
Q Consensus 300 asG~~~l~e~v~q 312 (814)
+++...+.+++.+
T Consensus 292 As~~~~L~~~~~~ 304 (339)
T 1mzj_A 292 ASVALALDRLVRS 304 (339)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 8887776666554
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-14 Score=155.56 Aligned_cols=108 Identities=15% Similarity=0.090 Sum_probs=95.8
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|++.++.....+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++.+|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas 114 (313)
T 1zow_A 36 MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK-VASMDQLAACSG 114 (313)
T ss_dssp HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCS-CCEEEEECGGGH
T ss_pred hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CcEEEECCcCHH
Confidence 5666665555567899999999999999999999999999999987665445667899999999974 799999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
++.||..|++.|++|.+|+||++|+|.++
T Consensus 115 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s 143 (313)
T 1zow_A 115 FMYSMITAKQYVQSGDYHNILVVGADKLS 143 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEGG
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEcccc
Confidence 99999999999999999999999999986
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-14 Score=160.79 Aligned_cols=187 Identities=16% Similarity=0.173 Sum_probs=132.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+.+++..+|++..+|+++++ ++|+|++.||.+|+++|++|.+|+|||+|+|.+|...+.
T Consensus 130 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~---------------- 193 (374)
T 2h84_A 130 IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSN---------------- 193 (374)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGCCC----------------
T ss_pred CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhhcC----------------
Confidence 467899999999998557999996 899999999999999999999999999999998742100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.
T Consensus 194 -----~~------------------------------------------------------------------------- 195 (374)
T 2h84_A 194 -----TD------------------------------------------------------------------------- 195 (374)
T ss_dssp -----SS-------------------------------------------------------------------------
T ss_pred -----CC-------------------------------------------------------------------------
Confidence 00
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-CC--------CCCC--
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-EP--------IDFP-- 237 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-~p--------~~~~-- 237 (814)
+.-+..++..++|||+|+||.+.+.++.. +..++.+.+.... +. ...+
T Consensus 196 ------------------dr~~~~~~~lfGDGA~A~vL~~~~~~~~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~ 254 (374)
T 2h84_A 196 ------------------GGDQMVASSIFADGSAAYIIGCNPRIEET---PLYEVMCSINRSFPNTENAMVWDLEKEGWN 254 (374)
T ss_dssp ------------------SHHHHHHHHHBCCEEEEEEEESSCCTTCC---CCEEEEEEEEEECSSCTTSEEEEEETTEEE
T ss_pred ------------------CHHHHhhhhhhccCcEEEEEecCCCcccC---CceeEEeeeeEEeCCCcccceeEEecCcEE
Confidence 00000112236799999999876654321 2237777665311 00 0000
Q ss_pred ------------CcHHHHHHHHHHHcC------CCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCC
Q psy12877 238 ------------IAPAFAIPTLLKNGG------VAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIG 299 (814)
Q Consensus 238 ------------~~~~~a~~~al~~aG------l~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~g 299 (814)
.....+++++|+++| ++++|||+| +|.++....-...+.||++++++.++ ....+.+|
T Consensus 255 ~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~~~lgl~~~k~~~s---~~~~~~~G 330 (374)
T 2h84_A 255 LGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIENSLGIDPKQTKNT---WDVYHAYG 330 (374)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHHTTCCGGGGHHH---HHHHHHHC
T ss_pred EEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHHHHcCCCHHHHHHH---HHHHHHhC
Confidence 122458889999999 999999999 99999988888889999999887532 12235555
Q ss_pred ChHHHHHHHHHHHHHc
Q psy12877 300 MSGARIVIHLCHALKS 315 (814)
Q Consensus 300 asG~~~l~e~v~qLr~ 315 (814)
++++..+.-++.++..
T Consensus 331 nt~sasi~~~L~~~~~ 346 (374)
T 2h84_A 331 NMSSASVIFVMDHARK 346 (374)
T ss_dssp BCTTHHHHHHHHHHHT
T ss_pred CchhhHHHHHHHHHHh
Confidence 6666666666666654
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=4e-14 Score=157.54 Aligned_cols=183 Identities=14% Similarity=0.046 Sum_probs=129.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+.+++..+|++..+|++++ +++|+|++.||..|+++|++|.+|.|||+|+|.+|....
T Consensus 119 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~~----------------- 181 (382)
T 1u0m_A 119 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQ----------------- 181 (382)
T ss_dssp SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGGCC-----------------
T ss_pred CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhcC-----------------
Confidence 45789999999999855899999 999999999999999999999999999999999764100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+. .+
T Consensus 182 -----~~d~-------------------~~-------------------------------------------------- 187 (382)
T 1u0m_A 182 -----PTDL-------------------GV-------------------------------------------------- 187 (382)
T ss_dssp -----TTCC-------------------SH--------------------------------------------------
T ss_pred -----cccC-------------------CH--------------------------------------------------
Confidence 0000 00
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEe--cCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA--ATEPI------------ 234 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~--~~~p~------------ 234 (814)
+ +..++..++|||+|+||.+.+. .+ .+|.++... .+...
T Consensus 188 ----~----------------~~~~~~lfGDGA~A~vL~~~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (382)
T 1u0m_A 188 ----G----------------SLLCNGLFGDGIAAAVVRGRGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFH 240 (382)
T ss_dssp ----H----------------HHHHHHHBCEEEEEEEEETTTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEE
T ss_pred ----H----------------HhhccchhcCCcEEEEEeccCC---CC----cEEEEeeeEecCChHHhcCceecCCceE
Confidence 0 0001223679999999986542 11 367665542 11100
Q ss_pred ------CC---CCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCC-ccccCCCCChHHH
Q psy12877 235 ------DF---PIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGA-VSLGHPIGMSGAR 304 (814)
Q Consensus 235 ------~~---~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~-la~Ghp~gasG~~ 304 (814)
.+ ..... +++++|+++|++++|||+|.+|.+++...-...+.||+++++++++.-. --+||..+++...
T Consensus 241 ~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~ 319 (382)
T 1u0m_A 241 FLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD 319 (382)
T ss_dssp EEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHH
T ss_pred EEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH
Confidence 01 11224 8999999999999999999999999988888899999999887643111 2367776666555
Q ss_pred HHHHHHH
Q psy12877 305 IVIHLCH 311 (814)
Q Consensus 305 ~l~e~v~ 311 (814)
.+.+++.
T Consensus 320 ~L~~~~~ 326 (382)
T 1u0m_A 320 ALRRLFD 326 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.50 E-value=8.5e-14 Score=170.97 Aligned_cols=185 Identities=16% Similarity=0.204 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC-------------------CCChHHHHHHHHcCCCCCccEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG-------------------LGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~-------------------~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
...|+.+++.+||+|||++++++| ++++|...... .....+..++..+|+. .|.+
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCee
Confidence 345999999999999999999999 78888653321 1234688899999995 5999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+|+++|+|++.||+.|+++|++|++|++|+||+|.++.... .+
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~------------------------------~~------- 200 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT------------------------------SV------- 200 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH------------------------------HH-------
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH------------------------------HH-------
Confidence 99999999999999999999999999999999999863210 00
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt 618 (814)
.+.+.....|.+..+ | |+.
T Consensus 201 -----------------~~~~~~~ls~~g~~~----~----------------------------------Fd~------ 219 (965)
T 3hhd_A 201 -----------------QFLRLGMLSPEGTCK----A----------------------------------FDT------ 219 (965)
T ss_dssp -----------------HHHHHTCBCTTCCCC----T----------------------------------TBT------
T ss_pred -----------------HHHhccCcCCCCccc----c----------------------------------chh------
Confidence 000000001222111 0 110
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCC------chHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP------IAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~------~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
..|.-..+||+++|||.+.+.|+ +++++|+|++...+.....+ .+...+++++|+++|+ .+|++|.|-
T Consensus 220 ~adG~~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEa 294 (965)
T 3hhd_A 220 AGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEA 294 (965)
T ss_dssp TCCSBCBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred ccCCccccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccc
Confidence 01122369999999999999886 58899999998776543222 3466799999999999 689999984
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=150.32 Aligned_cols=165 Identities=16% Similarity=0.176 Sum_probs=120.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+++++..+|++..+|+++++.+|+|++.||..|+++|++|.++.|||+|+|.+|..-.
T Consensus 101 ~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------ 162 (333)
T 4dfe_A 101 FPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILD------------------ 162 (333)
T ss_dssp BSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------------------
T ss_pred CCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccC------------------
Confidence 46789999999999778999999999999999999999999999999999999999875210
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+ +
T Consensus 163 ---------------------------------------------------~---------------------~------ 164 (333)
T 4dfe_A 163 ---------------------------------------------------F---------------------K------ 164 (333)
T ss_dssp ---------------------------------------------------T---------------------T------
T ss_pred ---------------------------------------------------c---------------------c------
Confidence 0 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC--------CC--------
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT--------EP-------- 233 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~--------~p-------- 233 (814)
+ ..++..++|||+|+||...+. + .|.++....+ .|
T Consensus 165 -----------------d---~~~~~lfGDGA~A~vl~~~~~-------~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 215 (333)
T 4dfe_A 165 -----------------D---RTTCVLFGDGAGAVILQASDE-------P--GVLASALHADGSHSNILCTPGNVNGGVV 215 (333)
T ss_dssp -----------------C---TTTTTTBCEEEEEEEEEEESS-------C--SEEEEEEEECGGGGGGEEBCEEEETTEE
T ss_pred -----------------c---ccceeeeccccEEEEEEEcCC-------C--CeEEEEEEEccCCcCeEEECCCCCCccc
Confidence 0 013455789999999986441 1 1222222111 00
Q ss_pred ---CCCC-----------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCC
Q psy12877 234 ---IDFP-----------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIG 299 (814)
Q Consensus 234 ---~~~~-----------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~g 299 (814)
..+. .....+++++|+++|++++|||+|.+|.+.....-...+.||++++++..+ .--+||..+
T Consensus 216 ~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~s 293 (333)
T 4dfe_A 216 SGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSA 293 (333)
T ss_dssp EECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGG
T ss_pred ccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHH
Confidence 0000 112357889999999999999999999999998888899999999876542 112566443
Q ss_pred Ch
Q psy12877 300 MS 301 (814)
Q Consensus 300 as 301 (814)
++
T Consensus 294 as 295 (333)
T 4dfe_A 294 AS 295 (333)
T ss_dssp GH
T ss_pred HH
Confidence 33
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-14 Score=162.21 Aligned_cols=188 Identities=17% Similarity=0.155 Sum_probs=130.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..+|++++ +++|+|++.||..|.++|++|.+|+|||+|+|.+|....
T Consensus 148 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~----------------- 210 (393)
T 1ted_A 148 APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAV----------------- 210 (393)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCC-----------------
T ss_pred cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccCC-----------------
Confidence 46789999999999866788998 999999999999999999999999999999999875210
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
|+..|+
T Consensus 211 -------------------------~~~~r~------------------------------------------------- 216 (393)
T 1ted_A 211 -------------------------FADDIN------------------------------------------------- 216 (393)
T ss_dssp -------------------------CCSSHH-------------------------------------------------
T ss_pred -------------------------CCCCHH-------------------------------------------------
Confidence 000000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEe--cCCCCC-----------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA--ATEPID----------- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~--~~~p~~----------- 235 (814)
+...+..++|||+|+||.+.+.+...+ ..+++|.+++.. .+....
T Consensus 217 ---------------------~~~~~~lfGDGA~A~vL~~~~~~~~~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~ 274 (393)
T 1ted_A 217 ---------------------DVVIHSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGIT 274 (393)
T ss_dssp ---------------------HHHHHHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEE
T ss_pred ---------------------HhhhhhhhcCccEEEEEecCCCccccC-cceeeeeccceEEcCCchhhccceecCCCeE
Confidence 001122367999999998765431112 234578887654 221110
Q ss_pred --CC--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCC-CccccCCCCChHHH
Q psy12877 236 --FP--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGG-AVSLGHPIGMSGAR 304 (814)
Q Consensus 236 --~~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG-~la~Ghp~gasG~~ 304 (814)
.+ .....+++++|+++|++++|||+|.+|.++....-...+.||++++++.++-- .--+|| +++.
T Consensus 275 ~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GN----t~sA 350 (393)
T 1ted_A 275 CELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGN----MLSV 350 (393)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCB----CTHH
T ss_pred EecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----chHh
Confidence 01 11245789999999999999999999999999888888999999987743110 112555 4444
Q ss_pred HHHHHHHHHH
Q psy12877 305 IVIHLCHALK 314 (814)
Q Consensus 305 ~l~e~v~qLr 314 (814)
.+.-++.++.
T Consensus 351 si~~~L~~~~ 360 (393)
T 1ted_A 351 SLIFVLETMV 360 (393)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444555544
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.2e-13 Score=148.79 Aligned_cols=108 Identities=18% Similarity=0.117 Sum_probs=93.7
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|.+.++.....+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++ ..+.++++.+|+|
T Consensus 46 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s 124 (335)
T 1u6e_A 46 RTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAG 124 (335)
T ss_dssp HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGH
T ss_pred hcCCceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHH
Confidence 444544443444678999999999999999999999999999998765544567889999999996 5799999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
++.||..|+++|++|.+|+||++|+|.++
T Consensus 125 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s 153 (335)
T 1u6e_A 125 FGYALGAAADMIRGGGAATMLVVGTEKLS 153 (335)
T ss_dssp HHHHHHHHHHHHHHTSCSSEEEEEEEECG
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEcccc
Confidence 99999999999999999999999999875
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-12 Score=141.55 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=55.5
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 93 ~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 151 (323)
T 3il3_A 93 AYPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSR 151 (323)
T ss_dssp SSSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred CCccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccc
Confidence 3467899999999997 7999999999999999999999999999999999999999875
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-13 Score=145.95 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++++|+|++.||..|+++|+
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFIK 126 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999988665545668999999999974 6999999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.+|+||++|+|.++
T Consensus 127 ~g~~~~vlv~g~e~~s 142 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLS 142 (309)
T ss_dssp TTSCSEEEEEEEEEGG
T ss_pred CCCCCEEEEEEecccc
Confidence 9999999999999875
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=3.5e-13 Score=146.35 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=86.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|+ ..|.++++++|+|++.||..|+++|
T Consensus 47 ~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i 124 (322)
T 1ub7_A 47 DEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALV 124 (322)
T ss_dssp TCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999876544345688999999999 4799999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|++|++|+|.++
T Consensus 125 ~~g~~~~vlv~g~e~~s 141 (322)
T 1ub7_A 125 EAGLAQKVLAVGAEALS 141 (322)
T ss_dssp HTTSCSEEEEEEEECGG
T ss_pred HcCCCCEEEEEEechhc
Confidence 99999999999999876
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-12 Score=142.51 Aligned_cols=194 Identities=19% Similarity=0.114 Sum_probs=127.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+++++..+|++..+|+++++.+|+|++.||..|+++|++|.++.|||+|+|.+|....
T Consensus 104 ~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------ 165 (345)
T 3s21_A 104 EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYE------------------ 165 (345)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHH------------------
T ss_pred CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhc------------------
Confidence 46789999999999877999999999999999999999999999999999999999875100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+ ...+ ++. |..
T Consensus 166 ----------------------------------~---~~~~--------~~~--------------------~~~---- 176 (345)
T 3s21_A 166 ----------------------------------K---TLER--------MTS--------------------PDV---- 176 (345)
T ss_dssp ----------------------------------H---HHHH--------HTC--------------------TTC----
T ss_pred ----------------------------------c---cccc--------ccC--------------------Ccc----
Confidence 0 0000 000 000
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC-CC--------CC-Cc
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP-ID--------FP-IA 239 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p-~~--------~~-~~ 239 (814)
+.+. +. ...++..++|||+|+||.+.+... + . ..|.+.....+.. .. +. .+
T Consensus 177 -~~~~------f~-------~~~~~~~~GdGA~A~vl~~~~~~~--~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 237 (345)
T 3s21_A 177 -TEEE------FR-------NELAALTLGCGAAAMVMARSELVP--D--A-PRYKGGVTRSATEWNKLCRGNLDRMVTDT 237 (345)
T ss_dssp -CHHH------HH-------HHHGGGGBCCEEEEEEEEEGGGST--T--S-CEEEEEEEEECGGGTTC-----------C
T ss_pred -chhh------hh-------hhccceeeccceeEEEEecCCCCC--C--C-cceeeeccccCcchhhhccccCcceEEcH
Confidence 0000 00 011233478999999998754311 1 1 2566555432200 00 10 11
Q ss_pred ----------HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHH
Q psy12877 240 ----------PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHL 309 (814)
Q Consensus 240 ----------~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~ 309 (814)
...+++++|+++|++++|||+|.+|.+.....-...+.||++++++..+ .--+||...++-...+.++
T Consensus 238 ~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~ 315 (345)
T 3s21_A 238 RLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKL 315 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHH
Confidence 1246788999999999999999999999988888889999999876421 1136676555544444443
Q ss_pred HH
Q psy12877 310 CH 311 (814)
Q Consensus 310 v~ 311 (814)
+.
T Consensus 316 ~~ 317 (345)
T 3s21_A 316 KE 317 (345)
T ss_dssp HH
T ss_pred HH
Confidence 33
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=140.89 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=55.1
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 110 ~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~ 167 (359)
T 3h78_A 110 DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSK 167 (359)
T ss_dssp BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGG
T ss_pred CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcc
Confidence 467899999999998 7999999999999999999999999999999999999999876
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-12 Score=171.70 Aligned_cols=196 Identities=13% Similarity=0.126 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc--------eEEEEecccCC------------------------CCChHHHHHH-HH
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ--------EVYMGNVCQAG------------------------LGQAPCRQAV-IF 448 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID--------~vivG~~~~~~------------------------~~~~~a~~~a-~~ 448 (814)
...|+.+++.+||+|||+++++++ ++++|+..+.. .....+..++ .+
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 456999999999999999999885 58888754211 0112333444 45
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK 528 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (814)
+|+ ..|+++++++|+||+.||+.|+++|++|++|++||||+|.|+..++. .+.
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~--------------------~f~----- 2779 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAII--------------------GFG----- 2779 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH--------------------HHH-----
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHH--------------------HHH-----
Confidence 688 46999999999999999999999999999999999999997632110 000
Q ss_pred ccHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccc
Q psy12877 529 IHMGNCA-ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLA 607 (814)
Q Consensus 529 ~~mg~~A-e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~ 607 (814)
.|+.++ ..++..++. .|.+..+
T Consensus 2780 -~~~als~~~~~~~~~~-------------------sp~~~cr------------------------------------- 2802 (3089)
T 3zen_D 2780 -DMAATADTEMMRAKGI-------------------SDSKFSR------------------------------------- 2802 (3089)
T ss_dssp -HHTCBCCHHHHHHTTC-------------------CTTTSCC-------------------------------------
T ss_pred -HhhhhhcchhhhhccC-------------------CcccccC-------------------------------------
Confidence 000000 000111111 1111111
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCC-------------chHHhHHHH
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP-------------IAPAFAIPT 674 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~-------------~g~~~A~~~ 674 (814)
| |+. ..|...++|||++|||++.+.|+++|.++++.|.|.+...+ +..++ .+...++++
T Consensus 2803 p-Fd~------~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~D-g~~~~~~aP~~g~~~a~~~~q~~ai~~ 2874 (3089)
T 3zen_D 2803 A-NDR------RRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFAD-GVHTSIPAPGLGALGAARGGRESTLAR 2874 (3089)
T ss_dssp S-SBT------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC-CCCCCSSCCCCGGGGGSTTGGGSHHHH
T ss_pred c-ccc------CCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecC-CcccCccCCchhHHhHhhhhHHHHHHH
Confidence 1 110 01223389999999999999999999999998877775433 22221 133458999
Q ss_pred HHHhcCC-CcceeEeh
Q psy12877 675 LLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 675 ~~~~~~~-~sq~~y~e 689 (814)
+|+++|+ .+||+|.|
T Consensus 2875 AL~~AGl~p~DIdyVE 2890 (3089)
T 3zen_D 2875 SLAQLGVGADDIAVIS 2890 (3089)
T ss_dssp HHHTTTCCGGGEEEEE
T ss_pred HHHHcCCCHHHeeEEE
Confidence 9999999 68999998
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.6e-12 Score=160.13 Aligned_cols=197 Identities=11% Similarity=0.030 Sum_probs=136.6
Q ss_pred CChHHHHHHHHcCCCCC-cceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKS-TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~-~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+..+.+++..+|++.. .+++.++.+|+|++.||..|.++|++|.++.|||+|+|.++......
T Consensus 724 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~--------------- 788 (979)
T 3tsy_A 724 MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGP--------------- 788 (979)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTCCCC---------------
T ss_pred CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchheeCC---------------
Confidence 46789999999999733 46899999999999999999999999999999999999865421100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.
T Consensus 789 -------------------------------------------------------------------------------~ 789 (979)
T 3tsy_A 789 -------------------------------------------------------------------------------S 789 (979)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC-----CCc----
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-----PIA---- 239 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~-----~~~---- 239 (814)
..+++. ..+|+.++|||+|+||++.+.+...+........+.+......... ..+
T Consensus 790 ~~~~~~----------------~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (979)
T 3tsy_A 790 EDALDS----------------LVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFH 853 (979)
T ss_dssp SSCHHH----------------HHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEE
T ss_pred ccCHHH----------------HhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEE
Confidence 001111 1223557899999999987765444433333333333322111110 011
Q ss_pred ------------HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCC-ccccCCCCChHHHHH
Q psy12877 240 ------------PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGA-VSLGHPIGMSGARIV 306 (814)
Q Consensus 240 ------------~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~-la~Ghp~gasG~~~l 306 (814)
...+++++|+++|++++|||+|.+|.++....-...+.||++++++.++=-. --+||...+|=...+
T Consensus 854 ~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L 933 (979)
T 3tsy_A 854 LWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFIL 933 (979)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHH
T ss_pred EchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 3568999999999999999999999999999999999999999986542110 125777666655566
Q ss_pred HHHHHHHHcC
Q psy12877 307 IHLCHALKSG 316 (814)
Q Consensus 307 ~e~v~qLr~g 316 (814)
.++..+++.|
T Consensus 934 ~~~~~~~~~G 943 (979)
T 3tsy_A 934 DEMRKKSLKG 943 (979)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHhhhccc
Confidence 6666655443
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.4e-12 Score=140.34 Aligned_cols=60 Identities=17% Similarity=0.139 Sum_probs=56.5
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+++++..+|++..+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 101 ~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 160 (354)
T 4efi_A 101 RLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISK 160 (354)
T ss_dssp SSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred CCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcc
Confidence 357899999999999768999999999999999999999999999999999999999875
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.33 E-value=9.3e-12 Score=137.42 Aligned_cols=60 Identities=15% Similarity=0.141 Sum_probs=56.6
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+++++..+|++..+|+++++.+|+|++.||..|.++|++|.++.|||+|+|++|.
T Consensus 115 ~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 115 VLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSK 174 (365)
T ss_dssp SBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred CCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhc
Confidence 346789999999999878999999999999999999999999999999999999999886
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-13 Score=167.14 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHcCCC-CcC----cc----eEEEEecccCCC------------------------CChHHHHHHH-H
Q psy12877 403 TKLGAVAIESAIQKANMD-KSD----VQ----EVYMGNVCQAGL------------------------GQAPCRQAVI-F 448 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~-~~d----ID----~vivG~~~~~~~------------------------~~~~a~~~a~-~ 448 (814)
..|+.+++.+||+|||++ |.+ |+ ++++|+..+... ....+..++. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 458999999999999998 665 34 455554433210 0123445555 5
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccC
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~ 497 (814)
+|+ ..|.++++++|+||+.||+.|++.|++|++|++||||+|.++..
T Consensus 1093 LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~ 1139 (1688)
T 2pff_A 1093 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEE 1139 (1688)
T ss_dssp CCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTT
T ss_pred cCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHH
Confidence 787 46999999999999999999999999999999999999998643
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-12 Score=145.12 Aligned_cols=96 Identities=16% Similarity=0.046 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+.+++ +.+|+||..||..|+++|
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998766 3355688999999999865678888 999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+|+||++|+|.++.
T Consensus 190 ~~G~~~~vLv~g~e~~s~ 207 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSV 207 (393)
T ss_dssp HHSTTCEEEEEEEEECGG
T ss_pred HcCCCCEEEEEEEEeccc
Confidence 999999999999999873
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-12 Score=163.50 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHcCCC-CcC----cc----eEEEEecccCC------------------------CCChHHHHHHH-H
Q psy12877 403 TKLGAVAIESAIQKANMD-KSD----VQ----EVYMGNVCQAG------------------------LGQAPCRQAVI-F 448 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~-~~d----ID----~vivG~~~~~~------------------------~~~~~a~~~a~-~ 448 (814)
..|+.+++.+||+|||++ |.+ |+ ++++|+..+.. .....+..++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 458889999999999994 766 44 46666543320 01224455666 4
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
+|+ ..|.++++++|+||+.||+.|++.|++|++|++||||+|.|+
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~ 1336 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQ 1336 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCC
Confidence 788 469999999999999999999999999999999999999875
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.28 E-value=9.2e-12 Score=135.85 Aligned_cols=111 Identities=16% Similarity=0.177 Sum_probs=98.8
Q ss_pred eecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCC
Q psy12877 386 SRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCA 465 (814)
Q Consensus 386 ~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~ca 465 (814)
.||++.++.....+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+
T Consensus 49 ~rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~ 128 (333)
T 4dfe_A 49 ARTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCS 128 (333)
T ss_dssp HHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGG
T ss_pred HhcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccH
Confidence 35666655555567899999999999999999999999999999988765556678999999999976789999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 466 Sg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
|++.||..|++.|++|.++.||++|+|.++.
T Consensus 129 s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 159 (333)
T 4dfe_A 129 GFAYAVATADSFIRSGQHRTALVIGAETFSR 159 (333)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeecccc
Confidence 9999999999999999999999999999874
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=155.74 Aligned_cols=91 Identities=14% Similarity=0.226 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHcCCC-CcC----cc----eEEEEecccCC------------------------CCChHHHHHHH-H
Q psy12877 403 TKLGAVAIESAIQKANMD-KSD----VQ----EVYMGNVCQAG------------------------LGQAPCRQAVI-F 448 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~-~~d----ID----~vivG~~~~~~------------------------~~~~~a~~~a~-~ 448 (814)
..|+.+++.+||++|||+ |.+ |+ ++++|+..+.. .....+..++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 447888999999999998 766 34 57777654420 00123455666 4
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
+|+ ..|.++++++|+||+.||+.|++.|++|++|++||||+|.++
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~ 1311 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQ 1311 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCC
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCC
Confidence 788 469999999999999999999999999999999999999875
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.8e-11 Score=134.61 Aligned_cols=58 Identities=19% Similarity=0.125 Sum_probs=53.9
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+.+++..+|+ ..|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 152 ~~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 152 AYPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG 209 (392)
T ss_dssp SBSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred CccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC
Confidence 346789999999999 4899999999999999999999999999999999999999875
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-11 Score=136.28 Aligned_cols=58 Identities=17% Similarity=0.071 Sum_probs=54.4
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcC--EEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQD--VMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d--~vLa~G~e~~s~ 68 (814)
..+++++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++ .|||+|+|.+|.
T Consensus 91 ~~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~ 150 (357)
T 3s3l_A 91 LWPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAG 150 (357)
T ss_dssp SSCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCT
T ss_pred cccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccc
Confidence 347899999999997 8999999999999999999999999999999 999999999884
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.9e-11 Score=134.96 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=53.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeecc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~ 65 (814)
.++.+.+++..+|++..+|+++++++|+||+.||..|.++|++|.++.|||+|+|.
T Consensus 85 ~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~ 140 (396)
T 1xpm_A 85 AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT 140 (396)
T ss_dssp SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh
Confidence 46799999999999866999999999999999999999999999999999999996
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=130.69 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=94.5
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcH
Q psy12877 388 TPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASG 467 (814)
Q Consensus 388 Tp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg 467 (814)
|.+.++.-...+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..++++++.+|+||
T Consensus 44 tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~ 122 (323)
T 3il3_A 44 SGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTGF 122 (323)
T ss_dssp TCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGHH
T ss_pred cCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHHH
Confidence 44443333334689999999999999999999999999999998876555667899999999997 68999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 468 MKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 468 ~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
+.||..|++.|++|.+++||++|+|.+|.
T Consensus 123 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 151 (323)
T 3il3_A 123 VYALSVADQFIRAGKVKKALVIGSDLNSR 151 (323)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEeecccc
Confidence 99999999999999999999999999974
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.7e-11 Score=131.22 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=91.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 398 VSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 398 ~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
.+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+||..||..|++.
T Consensus 62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~ 141 (354)
T 4efi_A 62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNL 141 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999988765556778999999999976789999999999999999999999
Q ss_pred HHcCCCCeEEEEeeecccc
Q psy12877 478 LSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~ 496 (814)
|++|.++.||++|+|.+|.
T Consensus 142 i~~g~~~~vLvvg~e~~s~ 160 (354)
T 4efi_A 142 IQTGAAKRVLLAVGDTISK 160 (354)
T ss_dssp HHTTSCSEEEEEEEECGGG
T ss_pred HHCCCCCEEEEEEechhcc
Confidence 9999999999999999975
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.2e-11 Score=130.80 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+||+.||..|++.|
T Consensus 77 ~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i 156 (365)
T 3gwa_A 77 RETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLV 156 (365)
T ss_dssp TCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999887655566788999999999867899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|++|.
T Consensus 157 ~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 157 ETGAARCVLLLTADTYSK 174 (365)
T ss_dssp HTTSCSEEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEchhhc
Confidence 999999999999999985
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.18 E-value=8.7e-11 Score=146.30 Aligned_cols=93 Identities=15% Similarity=0.067 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCC-ccEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKS-TVCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~-~~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++.. .++++++.+|+||..||..|.++|++
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s 767 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence 556999999999999999999999999998543 3356788999999999743 36899999999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|.+++|||+|+|.++
T Consensus 768 G~~~~vLvvg~e~~~ 782 (979)
T 3tsy_A 768 NAGARVLVVCSEITV 782 (979)
T ss_dssp STTCEEEEEEEECTT
T ss_pred CCCCEEEEEEEEecc
Confidence 999999999999865
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.17 E-value=5.7e-11 Score=130.18 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=90.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+|++.||..|+++|
T Consensus 65 ~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i 144 (345)
T 3s21_A 65 DVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARML 144 (345)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999877655566789999999999867899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 145 ~~g~~~~vLvvg~e~~s~ 162 (345)
T 3s21_A 145 ERGEIDYALVVDGETANL 162 (345)
T ss_dssp HHTSCSEEEEEEEECCHH
T ss_pred HCCCCCEEEEEEEcccch
Confidence 999999999999999873
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=6.5e-11 Score=130.27 Aligned_cols=109 Identities=13% Similarity=0.082 Sum_probs=94.3
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|.+.++.-...+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..++++++.+|+|
T Consensus 59 ~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s 137 (359)
T 3h78_A 59 RTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASG 137 (359)
T ss_dssp HHCCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGH
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHH
Confidence 344443332334578899999999999999999999999999998876555567899999999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
++.||..|++.|++|.+++||++|+|++|.
T Consensus 138 ~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~ 167 (359)
T 3h78_A 138 LLYGLQMARGQILAGLARHVLVVCGEVLSK 167 (359)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEECGG
T ss_pred HHHHHHHHHHHHHCCCcCEEEEEEEchhcc
Confidence 999999999999999999999999999974
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.16 E-value=9.4e-11 Score=125.57 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|++++|||.+++|+..+.. ..+..++..+|+ |++.++.+|+|+..+|..|+++|
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~---~~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I 124 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN---VTANYVARHLKI----PFLCLFGACSTSMESIAISSALI 124 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS---TTHHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch---hHHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHH
Confidence 34667899999999999999999999999999876522 245556666665 58999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccccCcc
Q psy12877 479 SLGHQDVMVAGGMESMSNVPF 499 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~~p~ 499 (814)
++|.+|.||++|+|++|+.+.
T Consensus 125 ~sG~~~~VLVVGaE~~S~aer 145 (347)
T 3lma_A 125 DGGFAKRALAATSSHNATAER 145 (347)
T ss_dssp HTTSCSEEEEEEEECGGGTTC
T ss_pred hcCCCCEEEEEEeccccchhh
Confidence 999999999999999997653
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1e-10 Score=126.51 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=88.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++++|+|++.||..|+++|
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas~~~al~~A~~~i 126 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG-CPAFDVAAACAGFTYALSVADQYV 126 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS-SCEEEECCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CeEEeeCcccHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999987665545678999999999974 799999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|+||++|+|.++
T Consensus 127 ~~g~~~~vlv~g~e~~s 143 (317)
T 1hnj_A 127 KSGAVKYALVVGSDVLA 143 (317)
T ss_dssp HTTSCSEEEEEEEECHH
T ss_pred HCCCCCEEEEEEechhc
Confidence 99999999999999876
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-10 Score=124.96 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLG 481 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG 481 (814)
..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|+++ .++++++.+|+|+..||..|++.|++|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~~~al~~A~~~i~~g 130 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE-AFAFDISAACSGFVYALSMAEKLVLSG 130 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT-CEEEEECCGGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC-ceEEEeCcccHHHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999999988766556778999999999985 899999999999999999999999999
Q ss_pred CCCeEEEEeeecccc
Q psy12877 482 HQDVMVAGGMESMSN 496 (814)
Q Consensus 482 ~~dvvLa~G~Es~s~ 496 (814)
.++.||++|+|.+|.
T Consensus 131 ~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 131 RYQTGLVIGGETFSK 145 (321)
T ss_dssp SCCCEEEEEEECGGG
T ss_pred CCCEEEEEEEccccc
Confidence 999999999999974
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=126.72 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=88.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++.+|+|++.||..|+++|
T Consensus 57 ~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i 135 (339)
T 1mzj_A 57 DETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN-AGGFDLSAACAGFCHALSIAADAV 135 (339)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCC-ccEEEccccchHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999987665545568899999999974 799999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|+||++|+|.++
T Consensus 136 ~~G~~~~vLv~g~e~~s 152 (339)
T 1mzj_A 136 ESGGSRHVLVVATERMT 152 (339)
T ss_dssp HHSSCSCEEEEEEEEGG
T ss_pred HCCCCCEEEEEEEcccc
Confidence 99999999999999986
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.6e-10 Score=123.07 Aligned_cols=59 Identities=15% Similarity=0.118 Sum_probs=55.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+++++..+|++..++.+.+ +.+|++++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 172 ~P~~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 172 LPGLDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp SSCHHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred cCHHHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 57899999999999977899999 999999999999999999999999999999999986
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=7.8e-10 Score=119.86 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=56.5
Q ss_pred cCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 6 QAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 6 ~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
+....++.+++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 84 ~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 84 PDFNMPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSK 145 (321)
T ss_dssp CSCSSSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGG
T ss_pred CCcCCCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence 3334577999999999998 4999999999999999999999999999999999999999875
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.06 E-value=6.1e-10 Score=123.90 Aligned_cols=189 Identities=12% Similarity=0.094 Sum_probs=127.4
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..++ +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-.
T Consensus 133 ~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------- 195 (387)
T 3a5r_A 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFR----------------- 195 (387)
T ss_dssp ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTTCC-----------------
T ss_pred CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchhhc-----------------
Confidence 4578999999999986564 9999999999999999999999999999999999999875110
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.+ ++.
T Consensus 196 -------~~-----------------------------------------------------------------~d~--- 200 (387)
T 3a5r_A 196 -------GP-----------------------------------------------------------------SET--- 200 (387)
T ss_dssp -------CC-----------------------------------------------------------------CSS---
T ss_pred -------CC-----------------------------------------------------------------Ccc---
Confidence 00 000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
.+-...++..++|||+|+||.+.+.. + ..+..++.+.+.... |..
T Consensus 201 ------------------~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 258 (387)
T 3a5r_A 201 ------------------HLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIV-PESHGAIEGHLLESG 258 (387)
T ss_dssp ------------------CCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTE
T ss_pred ------------------chhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEe-CCChHhcCceEcCCC
Confidence 00001123347899999999865421 2 222346776654321 110
Q ss_pred --C--CC--------cHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCCh
Q psy12877 236 --F--PI--------APAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMS 301 (814)
Q Consensus 236 --~--~~--------~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gas 301 (814)
+ +. ....+++++|+++|++ .+|| +|-+|.+.....-...+.||++++++-.+ --.--+||..+++
T Consensus 259 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAs 337 (387)
T 3a5r_A 259 LSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSAT 337 (387)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGH
T ss_pred eEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhH
Confidence 0 00 0124778999999998 8888 89999998777767788999998865321 0011267776666
Q ss_pred HHHHHHHHHHHH
Q psy12877 302 GARIVIHLCHAL 313 (814)
Q Consensus 302 G~~~l~e~v~qL 313 (814)
-...+.+++.+-
T Consensus 338 i~~~L~~~~~~g 349 (387)
T 3a5r_A 338 VFFIMDEMRKKS 349 (387)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 555555555443
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.5e-10 Score=129.15 Aligned_cols=108 Identities=17% Similarity=0.133 Sum_probs=93.8
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCC
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCA 465 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~ca 465 (814)
+|++..+..... .+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..+|++..++.+.+ +.+|+
T Consensus 123 rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~LGl~~~~~~~~v~~~~Ca 200 (413)
T 3v7i_A 123 SQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANRLPLRGDTMLLPATQWACV 200 (413)
T ss_dssp CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHHTTCCTTCEEEEESSCGGG
T ss_pred CCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHHhCCCCCceEEEeeCCccH
Confidence 566665543322 36789999999999999999999999999998876 3456789999999999876788999 99999
Q ss_pred cHHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 466 Sg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
+|+.||..|++.|++|.++.||++|+|.+|.
T Consensus 201 gg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 201 AGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 9999999999999999999999999999984
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.8e-10 Score=123.57 Aligned_cols=188 Identities=17% Similarity=0.174 Sum_probs=124.8
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+.+++..+|++...+ ++.++.+|++++.||..|.++|++|.++.|||+|+|.+|..-.
T Consensus 137 ~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------------- 199 (393)
T 3ov2_A 137 MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFR----------------- 199 (393)
T ss_dssp BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCC-----------------
T ss_pred CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhcc-----------------
Confidence 5779999999999985554 8999999999999999999999999999999999999863100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
++ ++ |
T Consensus 200 -------~~-----------------------------------------------------------------~d--~- 204 (393)
T 3ov2_A 200 -------GP-----------------------------------------------------------------NE--G- 204 (393)
T ss_dssp -------CC-----------------------------------------------------------------CT--T-
T ss_pred -------CC-----------------------------------------------------------------cc--c-
Confidence 00 00 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID------------- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~------------- 235 (814)
+.+ ....|..++|||+|+||...+.. .. ..+..++...+.... |..
T Consensus 205 --~~~----------------~~~~~~lFGDGAaA~vl~~~~~~-~~-~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~g~ 263 (393)
T 3ov2_A 205 --DFE----------------ALAGQAGFGDGAGAVVVGADPLE-GI-EKPIYEIAAAMQETV-AESQGAVGGHLRAFGW 263 (393)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCCT-TT-CCCSEEEEEEEEEEC-TTCTTSEEEEEETTEE
T ss_pred --chh----------------hhcccccccCccEEEEEEecCCC-cc-cCceeEEEecCcEEe-cCCcccCceeeeCCce
Confidence 000 00123346799999999865421 11 223335554443211 100
Q ss_pred ---CC--------CcHHHHHHHHHHHcCCCC-CCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCChH
Q psy12877 236 ---FP--------IAPAFAIPTLLKNGGVAK-QDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMSG 302 (814)
Q Consensus 236 ---~~--------~~~~~a~~~al~~aGl~~-~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gasG 302 (814)
+. .....+++++|+++|+++ +|| +|-+|.+.....-...+.||++++++-.+ --.--+||...+|=
T Consensus 264 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi 342 (393)
T 3ov2_A 264 TFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATV 342 (393)
T ss_dssp EEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHH
T ss_pred EEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHH
Confidence 00 011357899999999997 888 89999998888888899999999876321 00012566555554
Q ss_pred HHHHHHHHH
Q psy12877 303 ARIVIHLCH 311 (814)
Q Consensus 303 ~~~l~e~v~ 311 (814)
...+.+++.
T Consensus 343 p~~L~~~~~ 351 (393)
T 3ov2_A 343 YFVMDELRK 351 (393)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.2e-09 Score=119.99 Aligned_cols=58 Identities=16% Similarity=0.182 Sum_probs=53.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++ ..+++.++.+|++++.++..|..+|++|.++.|||++.|.+|.
T Consensus 98 ~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~ 155 (350)
T 4ewp_A 98 TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSD 155 (350)
T ss_dssp SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeecee
Confidence 467899999999998 6789999999999999999999999999999999999999764
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-09 Score=121.93 Aligned_cols=189 Identities=13% Similarity=0.094 Sum_probs=126.8
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..++ +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-. .
T Consensus 160 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~--~-------------- 223 (413)
T 1xes_A 160 LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFR--G-------------- 223 (413)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTCC--C--------------
T ss_pred cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhhc--C--------------
Confidence 4678999999999986564 9999999999999999999999999999999999999875210 0
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+ .
T Consensus 224 -----~~d--------------------------------------------------------------------~--- 227 (413)
T 1xes_A 224 -----PSE--------------------------------------------------------------------T--- 227 (413)
T ss_dssp -----CCT--------------------------------------------------------------------T---
T ss_pred -----CCc--------------------------------------------------------------------c---
Confidence 000 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
..+ ...++..++|||+|+||.+.+. .+ ..+..++.+.+.... |..
T Consensus 228 --~~~----------------~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 285 (413)
T 1xes_A 228 --HLD----------------SLVGQALFGDGASALIVGADPI---PQVEKACFEIVWTAQTVV-PNSEGAIGGKVREVG 285 (413)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCC---TTTSCCSEEEEEEEEEEC-TTCTTTEEEEEETTE
T ss_pred --chh----------------hcccceeEecccEEEEEecCCC---ccccCCceEEEeeeeEEc-CCChhhcCcEEecCc
Confidence 000 0011223679999999986542 12 222346776664321 110
Q ss_pred ----CC--------CcHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCCh
Q psy12877 236 ----FP--------IAPAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMS 301 (814)
Q Consensus 236 ----~~--------~~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gas 301 (814)
++ .....+++++|+++|++ .+|| .|-+|.+.....-...+.||++++++-.+ --.--+||..+++
T Consensus 286 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAs 364 (413)
T 1xes_A 286 LTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSAC 364 (413)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGH
T ss_pred eEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhh
Confidence 00 01134778899999998 8888 79999997777777789999999876320 0001267776666
Q ss_pred HHHHHHHHHHHH
Q psy12877 302 GARIVIHLCHAL 313 (814)
Q Consensus 302 G~~~l~e~v~qL 313 (814)
-...+.+++.+-
T Consensus 365 i~~~L~~~~~~g 376 (413)
T 1xes_A 365 VHFILDQTRKAS 376 (413)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 555555555443
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.01 E-value=7e-10 Score=123.21 Aligned_cols=58 Identities=17% Similarity=0.047 Sum_probs=53.8
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
.++.+.+++..+|++..++ ++.++.+|++++.||..|.++|++|.++.|||+|+|.+|
T Consensus 131 ~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 131 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTL 189 (387)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGG
T ss_pred cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccc
Confidence 4678999999999985554 899999999999999999999999999999999999987
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.00 E-value=9.5e-10 Score=120.90 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEeccc-CCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ-AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~-~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.+++++... ......++..++..+|++ ..++++++.+|+|+..||..|+++|+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~ 131 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLG 131 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999998741 112235788999999996 68999999999999999999999999
Q ss_pred cCCCC--eEEEEeeecccc
Q psy12877 480 LGHQD--VMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~d--vvLa~G~Es~s~ 496 (814)
+|.++ .||++|+|+++.
T Consensus 132 sg~~~~~~vLvvg~e~~s~ 150 (357)
T 3s3l_A 132 SGIGAGHAALLTTGDRFAG 150 (357)
T ss_dssp TTSSSSSEEEEEEEECCCT
T ss_pred cCCCCCCEEEEEEEecccc
Confidence 99999 999999999984
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.9e-10 Score=122.47 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
+..+|+.+|+++||+++|+++++||.++++++.+....+..+..++..+|++ .++++++.+|+|++.||..|++.|++
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv~~aC~g~~~aL~~A~~~i~~ 193 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDMNVACSSATFGLKTAADFVGG 193 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEECCccHHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999999998866555567889999999994 68999999999999999999999999
Q ss_pred CCCCeEEEEeeecccc
Q psy12877 481 GHQDVMVAGGMESMSN 496 (814)
Q Consensus 481 G~~dvvLa~G~Es~s~ 496 (814)
|.++.||++|+|.+|.
T Consensus 194 g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 194 GSVDAVLMVNPEICSG 209 (392)
T ss_dssp TSCSEEEEEEEEEGGG
T ss_pred CCCCEEEEEeehhcCC
Confidence 9999999999999974
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=8.9e-10 Score=147.34 Aligned_cols=184 Identities=16% Similarity=0.210 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC-------------------CCChHHHHHHHHcCCCCCccEEE
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG-------------------LGQAPCRQAVIFAGLPKSTVCTT 459 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~-------------------~~~~~a~~~a~~~Gl~~~~~~~t 459 (814)
..|+.+++.+||+|||+++.+++ +|++|...... .....+..++..+|+ +.|.++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 34889999999999999987665 58888653210 112467889999999 479999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHH
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~ 539 (814)
++++|+|++.||+.|+++|++|++|++||||++.+..... + ..|
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~-----------------------~-----~~~-------- 200 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNS-----------------------S-----LQF-------- 200 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHH-----------------------H-----HHH--------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHH-----------------------H-----HHH--------
Confidence 9999999999999999999999999999999997642100 0 000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCcccc
Q psy12877 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTA 619 (814)
Q Consensus 540 ~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~ 619 (814)
.+.|. -.|.+.-+ | |+..
T Consensus 201 ~~~~~------------------ls~~g~c~----~----------------------------------Fd~~------ 218 (2512)
T 2vz8_A 201 MKLGM------------------LSQDGTCR----S----------------------------------FDAE------ 218 (2512)
T ss_dssp HHTTC------------------BCTTCSCC----S----------------------------------SSTT------
T ss_pred ccCCC------------------CCCCCCCC----C----------------------------------CCCC------
Confidence 00000 01111111 0 1100
Q ss_pred CCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC---C---CCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 620 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI---D---FPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 620 ~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~---~---~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
.|--..+||+++|||.+.+.|+ ++++.|+|++...+... . .+.+...+++++|+++|+ .++++|.|-
T Consensus 219 adG~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yvea 292 (2512)
T 2vz8_A 219 GTGYCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEA 292 (2512)
T ss_dssp CCCBCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEEC
T ss_pred CCCcceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 1112289999999999999885 58999999998766421 1 123556799999999999 689999984
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.99 E-value=1e-09 Score=121.54 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+.++++ .+|+|++.||..|++.|
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999998764 23456788999999998557999996 89999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+|+||++|+|.++.
T Consensus 172 ~~g~~~~vLv~g~e~~s~ 189 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSL 189 (374)
T ss_dssp TTCTTCEEEEEEEECCGG
T ss_pred HcCCCCEEEEEEEEecch
Confidence 999999999999999873
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=98.99 E-value=2.4e-09 Score=114.75 Aligned_cols=185 Identities=17% Similarity=0.180 Sum_probs=117.6
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+..++..+| +|++.++.+|+|++.++..|+++|++|.++.|||+|+|.+|+.+...+ +
T Consensus 91 ~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r-----~------------ 149 (347)
T 3lma_A 91 TANYVARHLK----IPFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFR-----Y------------ 149 (347)
T ss_dssp THHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------
T ss_pred HHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhcc-----C------------
Confidence 4556666664 589999999999999999999999999999999999999997543110 0
Q ss_pred CcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCH
Q psy12877 93 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF 172 (814)
Q Consensus 93 ~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~ 172 (814)
|.
T Consensus 150 ------------------------------------------------------p~------------------------ 151 (347)
T 3lma_A 150 ------------------------------------------------------PT------------------------ 151 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred HhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEec------CCCCCCCCc--H--HH
Q psy12877 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA------TEPIDFPIA--P--AF 242 (814)
Q Consensus 173 e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~------~~p~~~~~~--~--~~ 242 (814)
++...+|.+ ..-..|||+|+||..+. ..| +|.+...-. .||..|+.. | ..
T Consensus 152 -e~g~q~p~t-----------a~~t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ 211 (347)
T 3lma_A 152 -EYGGQKPGT-----------ATSTVTGSGAVVLSQQP------GGI--KITSATVGRVIDLGITDSQDMGSAMAPAAAD 211 (347)
T ss_dssp ------------------------CCCEEEEEEEESSC------CSE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHH
T ss_pred -hhcccCCch-----------hcEEccceeEEEEEecC------CCC--ceeeeeeeeeeccCCCCCCCccccchHHHHH
Confidence 000011111 11134899999998642 223 455433211 145454422 2 34
Q ss_pred HHHHHHHHcCCCCCCccEEe---cCCCchHHHHHHhhhcCCCCCCcccCCCCcccc---------CCCCChHHHHHHHHH
Q psy12877 243 AIPTLLKNGGVAKQDVALWE---INEAFSVVVLANIKKLDIDPSKVNVHGGAVSLG---------HPIGMSGARIVIHLC 310 (814)
Q Consensus 243 a~~~al~~aGl~~~DID~~e---~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~G---------hp~gasG~~~l~e~v 310 (814)
.+.+.|+++|++++|+|+|- +|..........++.+|++.+++-..=|.+-++ ---|.+.......++
T Consensus 212 ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~ 291 (347)
T 3lma_A 212 TIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIF 291 (347)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHHHHHTHH
T ss_pred HHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHHHHHHHH
Confidence 66889999999999999999 555555555667788898875322222222222 112567777777888
Q ss_pred HHHHcC
Q psy12877 311 HALKSG 316 (814)
Q Consensus 311 ~qLr~g 316 (814)
.+|+.|
T Consensus 292 ~~~~~g 297 (347)
T 3lma_A 292 KEIEAG 297 (347)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 888853
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.7e-09 Score=120.43 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..+|++...+ ++.++.+|+++..||..|++.|+
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~ 179 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998866 446678999999999986544 89999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.++.||++|+|.+|
T Consensus 180 sg~~~~vLvvg~E~~s 195 (393)
T 3ov2_A 180 NNRGARVLVVACEITV 195 (393)
T ss_dssp HSTTCEEEEEEEECGG
T ss_pred cCCCCEEEEEEEeccc
Confidence 9999999999999996
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=120.56 Aligned_cols=96 Identities=16% Similarity=0.056 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|+..||..|+++|
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998764 234567899999999986554 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 175 ~~g~~~~vLvvg~e~~s~ 192 (387)
T 3a5r_A 175 ENNKGARVLIVCSEMTTT 192 (387)
T ss_dssp HHSTTCEEEEEEEECCTT
T ss_pred HhCCCCEEEEEEEeccch
Confidence 999999999999999874
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-09 Score=121.62 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|++.||..|+++|+
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998765 234567889999999986553 89999999999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|.+|+||++|+|.++.
T Consensus 203 ~G~~~~vLvvg~E~~s~ 219 (413)
T 1xes_A 203 NNRGARVLVICSETTAV 219 (413)
T ss_dssp TSTTCCEEEEEEECTTT
T ss_pred cCCCCEEEEEEehhhhh
Confidence 99999999999999874
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-09 Score=120.50 Aligned_cols=94 Identities=17% Similarity=0.095 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..+|++...+ ++.++.+|+++..||..|.+.|+
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~ 173 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999998866 345678899999999986543 89999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.++.||++|+|.+|
T Consensus 174 sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 174 NSRGARVLVVAAELTL 189 (387)
T ss_dssp SSTTCEEEEEEEECGG
T ss_pred cCCCCEEEEEEEeccc
Confidence 9999999999999997
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.8e-09 Score=116.97 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 398 VSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 398 ~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
.+.+..+|+++|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..+++.++.+|+++..||..|.+.
T Consensus 58 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~ 136 (350)
T 4ewp_A 58 AEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADAL 136 (350)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhh
Confidence 3578999999999999999999999999999998877655677889999999997 467999999999999999999999
Q ss_pred HHcCCCCeEEEEeeeccccC
Q psy12877 478 LSLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~~ 497 (814)
|++|..+.||++++|.+|..
T Consensus 137 i~~g~~~~~Lvv~~E~~s~~ 156 (350)
T 4ewp_A 137 VRSGTARHVLVVGVERLSDV 156 (350)
T ss_dssp HHTTSCSEEEEEEEEEGGGG
T ss_pred hhCCCccceeEeeeeeceec
Confidence 99999999999999998743
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=2.2e-09 Score=119.13 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+.+++ +.+|+|++.||..|++.|
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i 160 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC 160 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999998765 3345678899999999855789999 999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|+||++|+|.++
T Consensus 161 ~~g~~~~vLv~g~e~~s 177 (382)
T 1u0m_A 161 TAYPEANALIVACEFCS 177 (382)
T ss_dssp HHSTTCEEEEEEEEEGG
T ss_pred HcCCCCEEEEEEEeccc
Confidence 99999999999999986
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=123.93 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=53.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHC----CCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSL----GHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~s----G~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++...+++.| +.+|++++.+|..|.++|++ |.++.|||+|+|.+|.
T Consensus 145 ~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 145 NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTT 208 (465)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGG
T ss_pred CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecch
Confidence 56789999999999855558999 89999999999999999997 9999999999999875
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-09 Score=121.58 Aligned_cols=59 Identities=8% Similarity=0.084 Sum_probs=55.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++..++++.++.+|++++.||..|..+|++|.++.|||+|+|.+|.
T Consensus 90 ~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 90 SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC
T ss_pred CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc
Confidence 46789999999999866999999999999999999999999999999999999999765
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.8e-09 Score=115.94 Aligned_cols=93 Identities=16% Similarity=0.175 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
.+..+|+.+|+++||+|+|+ ++||.+++++..+....+..+..++..+|++. .+.++++.+|+|++.||..|++.|+
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i~ 127 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVG-ALAFDLSAAATGFVYGLASVGSLIS 127 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTT-SEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCC-CcEEEEcCcChHHHHHHHHHHHHHH
Confidence 57899999999999999999 89999999987654334457889999999974 7999999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.+|+||++|+|.++
T Consensus 128 ~g~~~~vLv~g~e~~s 143 (331)
T 2x3e_A 128 AGLADSALLVGVDTFS 143 (331)
T ss_dssp TTSCSEEEEEEEECGG
T ss_pred cCCCCEEEEEEeeccc
Confidence 9999999999999976
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.7e-09 Score=120.80 Aligned_cols=111 Identities=8% Similarity=0.023 Sum_probs=93.1
Q ss_pred EeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCC--CCCccEEE
Q psy12877 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGL--PKSTVCTT 459 (814)
Q Consensus 382 IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl--~~~~~~~t 459 (814)
+.|.+++.+.... .+.+..+|+.+|+++||+++|+++++||.+++|+..+....+..+..++..+|+ +...++++
T Consensus 35 ~~g~G~~~~~~~~---~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~ 111 (450)
T 2f82_A 35 TIGLGQDCLAFCT---ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVD 111 (450)
T ss_dssp TTTSCCCEEECCC---TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCE
T ss_pred hhhhCceeeeeCC---CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEE
Confidence 4555554433211 257899999999999999999999999999999876554466788999998898 44679999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCC--CeEEEEeeeccc
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMS 495 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~--dvvLa~G~Es~s 495 (814)
++.+|+||..||..|.+.|++|.+ +.|||+|+|.++
T Consensus 112 v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 112 STNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp ECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc
Confidence 999999999999999999999998 999999999875
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-08 Score=115.19 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHHHc-
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSL- 480 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I~s- 480 (814)
.+|+.+|+++||+++|+++++||.++++++. ....+..+..++..+|++.....+.+ +.+|++|..||..|.+.|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence 5899999999999999999999999999876 34466789999999999855448999 79999999999999999997
Q ss_pred ---CCCCeEEEEeeecccc
Q psy12877 481 ---GHQDVMVAGGMESMSN 496 (814)
Q Consensus 481 ---G~~dvvLa~G~Es~s~ 496 (814)
|.++.||++|+|.+|.
T Consensus 190 ~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 190 TARGKPARILVLALEVSTT 208 (465)
T ss_dssp HHTTCCCEEEEEEEECCGG
T ss_pred cccCCCCEEEEEEEeecch
Confidence 9999999999999874
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=114.87 Aligned_cols=58 Identities=7% Similarity=-0.033 Sum_probs=53.4
Q ss_pred CChHHHHHHHHcCC--CCCcceEEecCCCchHHHHHHHHHHHHHCCCc--CEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl--~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~--d~vLa~G~e~~s 67 (814)
.+..+.+++..+|+ +..+++++++.+|+||+.||..|.++|++|.+ +.|||+|+|.++
T Consensus 88 ~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 88 SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC
T ss_pred CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc
Confidence 56799999999999 44799999999999999999999999999998 999999999864
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9.6e-09 Score=113.93 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++| +++||.+++++..+....+..+..++..+|++...+++.++.+|++|..||..|.+.|
T Consensus 53 ~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i 130 (388)
T 3v4n_A 53 SQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHV 130 (388)
T ss_dssp TCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHH
Confidence 57899999999999999997 8999999999887665566789999999999865899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++.||++|+|.++.
T Consensus 131 ~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 131 ALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp HHCTTCEEEEEEEEEECC
T ss_pred hcCCCCEEEEEEehhhcc
Confidence 999999999999999875
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.4e-08 Score=113.62 Aligned_cols=111 Identities=9% Similarity=0.103 Sum_probs=92.2
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHH---HHcCCCCCc
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAV---IFAGLPKST 455 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a---~~~Gl~~~~ 455 (814)
..++.|.|.+.+..... +.+..+|+++|+++||+++|+++++||.+++++..+....+..+..++ ..+|++ ..
T Consensus 53 ~~~~~~~Gi~~r~~~~~---~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~ 128 (478)
T 2p8u_A 53 GKYTIGLGQAKMGFCTD---REDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DI 128 (478)
T ss_dssp TCCCCCCCCCEEECCCT---TCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CC
T ss_pred hHhecccCceEEEeCCC---CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-Cc
Confidence 45677877776654321 478999999999999999999999999999998765444556777777 345555 57
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCC--CCeEEEEeeec
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGH--QDVMVAGGMES 493 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~--~dvvLa~G~Es 493 (814)
+++.++.+|++|..||..|.+.|++|. .+.|||+|+|.
T Consensus 129 ~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 129 EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp BCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred eEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 899999999999999999999999999 99999999995
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=2.2e-08 Score=111.55 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=84.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+..|+++||++ +++++||.+++|+..+....+..+..++..+|++...++++++.+|+||..||..|++.|
T Consensus 48 ~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I 125 (396)
T 1xpm_A 48 NQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYL 125 (396)
T ss_dssp TCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHH
Confidence 478899999999999998 789999999999876654556789999999999866899999999999999999999999
Q ss_pred HcCCCCeEEEEeeec
Q psy12877 479 SLGHQDVMVAGGMES 493 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es 493 (814)
++|.+++||++|+|.
T Consensus 126 ~sg~~~~vLvvg~e~ 140 (396)
T 1xpm_A 126 ATRPNEKVLVIATDT 140 (396)
T ss_dssp TTCTTCEEEEEEEEE
T ss_pred HcCCCCEEEEEeehh
Confidence 999999999999996
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.36 E-value=8.2e-07 Score=100.76 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=79.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCC--CCccEEEeCCCCCcHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLP--KSTVCTTVNKVCASGMKAIMLASQ 476 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~--~~~~~~tv~~~caSg~~Ai~~Aa~ 476 (814)
+.+..+|++.|++.||+++|++|++||.+++++..+....+..+..+...+|++ ....++.++.+|.++..|+..|.+
T Consensus 51 ~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~ 130 (460)
T 2wya_A 51 QEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAAN 130 (460)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHH
Confidence 578999999999999999999999999999998876655666777787777643 246789999999999999999999
Q ss_pred HHHcCCCCeEEEEeee
Q psy12877 477 TLSLGHQDVMVAGGME 492 (814)
Q Consensus 477 ~I~sG~~dvvLa~G~E 492 (814)
.|++|..+.++++.++
T Consensus 131 ~i~~g~~~~~lvvv~~ 146 (460)
T 2wya_A 131 WMESSSWDGRYAMVVC 146 (460)
T ss_dssp HHTSTTCCSCEEEEEE
T ss_pred HHHhccccceEEEEEe
Confidence 9999988755544333
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.08 E-value=1e-05 Score=91.86 Aligned_cols=55 Identities=9% Similarity=0.044 Sum_probs=47.7
Q ss_pred CChHHHHHH---HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCC--cCEEEEEeecc
Q psy12877 10 GQAPCRQAV---IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGH--QDVMVAGGMES 65 (814)
Q Consensus 10 ~~~~ar~~a---~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~--~d~vLa~G~e~ 65 (814)
.+..+..++ ..+|++ .++++.++.+|++|..||..|..+|++|. .+.|||+|+|.
T Consensus 109 ~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 109 SKSVKTNLMQLFEESGNT-DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp SSCHHHHHGGGTTTTTCC-CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred CccHHHHHHHHHhhcCCC-CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 345777777 445555 79999999999999999999999999999 99999999994
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0012 Score=74.69 Aligned_cols=52 Identities=12% Similarity=0.016 Sum_probs=42.0
Q ss_pred CChHHHHHHHHcCCC--CCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEE
Q psy12877 10 GQAPCRQAVIFAGLP--KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAG 61 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~--~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~ 61 (814)
.+..+-.+...+|+. ..++++.++.+|+++..|+..|...|++|..+.++++
T Consensus 90 ~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvv 143 (460)
T 2wya_A 90 SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAM 143 (460)
T ss_dssp SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEE
T ss_pred CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEE
Confidence 455777777777642 3678999999999999999999999999988755444
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=83.17 E-value=1.8 Score=44.04 Aligned_cols=16 Identities=25% Similarity=0.698 Sum_probs=11.9
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|++||||...
T Consensus 117 ~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 117 KERADIVTCNPPYFAT 132 (259)
T ss_dssp TTCEEEEEECCCC---
T ss_pred cCCccEEEECCCCCCC
Confidence 4789999999999765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 814 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 8e-77 | |
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 7e-55 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 9e-61 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 2e-39 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 4e-50 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 5e-33 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 6e-46 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 2e-30 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 8e-29 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 5e-05 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 3e-27 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 5e-04 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 7e-26 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 6e-05 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 8e-21 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 6e-04 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 0.002 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 0.003 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 0.004 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 0.004 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 247 bits (632), Expect = 8e-77
Identities = 110/270 (40%), Positives = 158/270 (58%), Gaps = 6/270 (2%)
Query: 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ 434
S P + I S +RT +GSF + + A +LGA I + +++A + +V EV +G V
Sbjct: 1 STP-SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLP 59
Query: 435 AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
AG GQ P RQA + AG+P+ +N++ SG++A+ L Q ++ G ++VAGGMESM
Sbjct: 60 AGEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESM 119
Query: 495 SNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 553
S P + RG K G +ID ++ DGL+D + HMG AEN AK++ +SRDEQD +A
Sbjct: 120 SMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFA 179
Query: 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATVFQK 612
++S K+ A K+ F +IVP + RKG DI V+ DE + L F
Sbjct: 180 VASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKLRPAF-D 236
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRK 642
+ GTVTAGNAS LNDGAAA +LM+E +
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASR 266
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 188 bits (478), Expect = 7e-55
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 5/216 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ P RQA + AG+P+ +N++ SG++A+ L Q ++ G ++VA
Sbjct: 54 LGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVA 113
Query: 61 GGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GGMESMS P + RG K G +ID ++ DGL+D + HMG AEN AK++ +SRD
Sbjct: 114 GGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRD 173
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSL 178
EQD +A++S K+ A K+ F +IVP + RKG DI V+ DE + L
Sbjct: 174 EQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214
F + GTVTAGNAS LNDGAAA +LM+E +
Sbjct: 232 RPAF-DKEGTVTAGNASGLNDGAAAALLMSEAEASR 266
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 204 bits (520), Expect = 9e-61
Identities = 91/275 (33%), Positives = 149/275 (54%), Gaps = 12/275 (4%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+ +IV RTP+G +L S+ L A A+ + ++ + K +V++VY G QAG
Sbjct: 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGED 60
Query: 439 QA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
R A++ AG P TVN++C SG++A+ A++ + G V + G+ESMS
Sbjct: 61 NRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA 120
Query: 498 PFYLN--RGETKYGGMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
P+ + G + + D V + +Y MG AEN A+ + I R+EQD
Sbjct: 121 PYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQD 180
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATV 609
+AL S++K+ A++ F ++VPV + + K +I+V +DE + + EK +L V
Sbjct: 181 RFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTSLEKLAALRPV 238
Query: 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN 644
F +E GTVTAGN+S LNDGAAA +L++++ +
Sbjct: 239 F-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHG 272
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 144 bits (365), Expect = 2e-39
Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 12/225 (5%)
Query: 1 MGNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G QAG R A++ AG P TVN++C SG++A+ A++ + G V +
Sbjct: 51 AGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYI 110
Query: 60 AGGMESMSNVPFYLN--RGETKYGGMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAK 112
G+ESMS P+ + G + + D V + +Y MG AEN A+
Sbjct: 111 GSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAE 170
Query: 113 KFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKIN 171
+ I R+EQD +AL S++K+ A++ F ++VPV + + K +I+V +DE + +
Sbjct: 171 MYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTS 228
Query: 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN 216
EK +L VF +E GTVTAGN+S LNDGAAA +L++++ +
Sbjct: 229 LEKLAALRPVF-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHG 272
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 175 bits (443), Expect = 4e-50
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 15/272 (5%)
Query: 376 KPGDVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKA----NMDKSDVQEVYMG 430
+P DV IV+ +R+ +G F+ + ++ L + I + D + ++EV G
Sbjct: 8 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACG 67
Query: 431 NVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
NV G G R A + +G+P ST +N+ C+SG+ A+ + + +G D+ +A G
Sbjct: 68 NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALG 127
Query: 491 MESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
+ESM+N +N + I MG EN A F ISR +QD
Sbjct: 128 VESMTNNYKNVNPLGMISSEE------LQKNREAKKCLIPMGITNENVAANFKISRKDQD 181
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610
E+A +SY+K+ A +F +I+P+ +P I +++ + E S+ F
Sbjct: 182 EFAANSYQKAYKAKNEGLFEDEILPIKLPDG----SICQSDEGPRPNVTAESLSSIRPAF 237
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRK 642
K+ GT TAGNAS ++DG A +L +
Sbjct: 238 IKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 126 bits (317), Expect = 5e-33
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV G G R A + +G+P ST +N+ C+SG+ A+ + + +G D+ +A
Sbjct: 66 CGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLA 125
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
G+ESM+N +N + I MG EN A F ISR +
Sbjct: 126 LGVESMTNNYKNVNPLGMISSEE------LQKNREAKKCLIPMGITNENVAANFKISRKD 179
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDE+A +SY+K+ A +F +I+P+ +P I +++ + E S+
Sbjct: 180 QDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG----SICQSDEGPRPNVTAESLSSIRP 235
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214
F K+ GT TAGNAS ++DG A +L +
Sbjct: 236 AFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 163 bits (412), Expect = 6e-46
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 376 KPGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEV-YMGNV 432
P DV IV RTPMG + + A + A I +++ + +D +V++V +
Sbjct: 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVN 62
Query: 433 CQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGME 492
G R A + +P ++ TV+++C S M A+ A+Q + G+ DV V GG+E
Sbjct: 63 QTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVE 122
Query: 493 SMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEY 552
M +V M+ +D + L MG AE K ISR++QD +
Sbjct: 123 HMGHVSM-----------MHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAF 171
Query: 553 ALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQK 612
A+ S++ + A F +I+P+ G I ++ E +L F
Sbjct: 172 AVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNP 231
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRK 642
+ GTVTAG +S + DGA+ ++M+ + +
Sbjct: 232 KGGTVTAGTSSQITDGASCMIVMSAQRAKD 261
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 118 bits (296), Expect = 2e-30
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G R A + +P ++ TV+++C S M A+ A+Q + G+ DV V
Sbjct: 59 GCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVV 118
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GG+E M +V M+ +D + L MG AE K ISR++
Sbjct: 119 GGVEHMGHVSM-----------MHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A+ S++ + A F +I+P+ G I ++ E +L
Sbjct: 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKP 227
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214
F + GTVTAG +S + DGA+ ++M+ + +
Sbjct: 228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKD 261
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 109 bits (273), Expect = 8e-29
Identities = 40/97 (41%), Positives = 54/97 (55%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
+PL RI+++ +P P A L+ G D+ L E NEAF+ A K
Sbjct: 2 QPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKD 61
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
L DPS VNV+GGA+++GHPIG SGARI+ L +K
Sbjct: 62 LGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMK 98
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 41.5 bits (97), Expect = 5e-05
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW--YDENTTQRLSEEAVCR 702
+PL RI+++ +P P A L+ G + N AV +
Sbjct: 2 QPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNK 60
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (262), Expect = 3e-27
Identities = 45/104 (43%), Positives = 61/104 (58%)
Query: 216 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANI 275
N L R I + P + PA+AIP +L+ G+ QD+ ++EINEAF+ L I
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61
Query: 276 KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKG 319
KL ID +KVN GGA++LGHP+G +GAR V + LK Q G
Sbjct: 62 HKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQIG 105
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.4 bits (89), Expect = 5e-04
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 644 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW 686
N L R I + P + PA+AIP +L+ G Q
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDI 44
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 101 bits (252), Expect = 7e-26
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
+PLAR+ A A P I P A L+ G++ D+ L E+NEAF+ LA +++
Sbjct: 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLRE 60
Query: 278 --LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
L ++ ++N +GGA++LGHP+G SGARI+ L H ++
Sbjct: 61 WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMR 99
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 41.1 bits (96), Expect = 6e-05
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW 686
+PLAR+ A A P I P A L+ G
Sbjct: 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDL 41
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 86.6 bits (214), Expect = 8e-21
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLA---N 274
+PLA I + A +P P A LK G+ D+ E+NEAF+ L +
Sbjct: 3 EPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKD 62
Query: 275 IKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
+K LD KVN+HGGA++LGHP G SGARI L + +K
Sbjct: 63 LKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 102
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 38.5 bits (89), Expect = 6e-04
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW 686
+PLA I + A +P P A LK G
Sbjct: 3 EPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADI 43
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 37.8 bits (86), Expect = 0.002
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 418 NMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477
K + +V ++ I + + A G+ A+ A +T
Sbjct: 114 EFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRT 173
Query: 478 LSLGHQDVMVAGGMESMSN 496
+ G ++V+GG++S +
Sbjct: 174 IRRG-TPLVVSGGVDSALD 191
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 37.8 bits (86), Expect = 0.003
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
I + + A G+ A+ A +T+ G ++V+GG++S +
Sbjct: 137 AVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD 191
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 37.3 bits (85), Expect = 0.004
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 26 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
T V+ C SG+ ++ A + + G DVM AG ++
Sbjct: 157 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT 199
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 37.3 bits (85), Expect = 0.004
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
T V+ C SG+ ++ A + + G DVM AG ++
Sbjct: 157 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT 199
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.97 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.97 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.96 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.96 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.42 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.42 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.19 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.04 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.03 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.98 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.97 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.9 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 98.89 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 98.88 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 98.87 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 98.86 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.86 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.83 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.83 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 98.82 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.81 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.79 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 98.79 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.76 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 98.74 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 98.73 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 98.71 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.68 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.68 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.62 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.55 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 98.5 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.34 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.31 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.18 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.05 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.04 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.04 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.03 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 97.92 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 97.72 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.71 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 97.58 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 97.56 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 97.19 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.97 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.58 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 96.44 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 96.38 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.36 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 96.33 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 96.17 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 95.99 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 95.95 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.53 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 89.9 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 89.46 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 86.17 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 86.05 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 85.75 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 83.04 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 80.71 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=5.2e-49 Score=412.70 Aligned_cols=264 Identities=41% Similarity=0.660 Sum_probs=241.0
Q ss_pred CceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccE
Q psy12877 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 378 ~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++||||++.||||+++.|.|+++++.||+..+++++|+++||+|++||.+++|++.+.+.+++++|++++.+|+|..+|+
T Consensus 3 ~~V~Iv~~~RTP~g~~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vpa 82 (268)
T d1m3ka1 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATA 82 (268)
T ss_dssp CCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEeceeCcccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccccc
Confidence 57999999999999999999999999999999999999999999999999999999877889999999999999999999
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC-CccCCCCccccccccccccccccccccHHHHHH
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR-GETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae 536 (814)
++|+++|+||++||..|+++|++|.+|++|++|+|+||+.|+.... .....+.....+.+..+++.+++....||.+||
T Consensus 83 ~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~~Ae 162 (268)
T d1m3ka1 83 WGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAE 162 (268)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHHHHH
T ss_pred eeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHHHHH
Confidence 9999999999999999999999999999999999999999976542 233333334444455566777888889999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCCC
Q psy12877 537 NTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENG 615 (814)
Q Consensus 537 ~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~~ 615 (814)
+++++||||||+||+|+++||++|..+..+++|++|++|+++..+.+. +++++|+.+| .+++|+|.+|||+|++ .|
T Consensus 163 ~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~g~--~~v~~d~~~r~~tt~e~L~~L~p~f~~-~G 239 (268)
T d1m3ka1 163 NVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDK-EG 239 (268)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCC--EEECSCSSCCTTCCHHHHHTCCBSSCT-TC
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCCCC--eEEeCCCCCCCCCCHHHHcCCCCCcCC-CC
Confidence 999999999999999999999999999999999999999988776664 5679999998 6999999999999986 69
Q ss_pred ccccCCCCccchhhhhhhhcCHHHHHHcC
Q psy12877 616 TVTAGNASTLNDGAAACVLMTEEAVRKFN 644 (814)
Q Consensus 616 plt~~d~s~~sDGAAAvvL~s~e~A~~~g 644 (814)
.+|++|||+++|||||+||+|+++|+++|
T Consensus 240 tvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 240 TVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp CCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred cEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999986
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.5e-47 Score=403.99 Aligned_cols=264 Identities=34% Similarity=0.589 Sum_probs=231.3
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCC-CCChHHHHHHHHcCCCCCccE
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG-LGQAPCRQAVIFAGLPKSTVC 457 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~-~~~~~a~~~a~~~Gl~~~~~~ 457 (814)
++|||++.||||+++.|.++++++.||+..+++++|+++||++++||.+++|++.+.+ .+.+++|++++..|+|..+|+
T Consensus 1 ~a~Iv~~~RTPfgk~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~ 80 (273)
T d1ulqa1 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG 80 (273)
T ss_dssp CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred CEEEEccccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccce
Confidence 5899999999999999999999999999999999999999999999999999998765 467899999999999999999
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCc--cCCCCcccccc-----cccccccccccccc
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGE--TKYGGMNLIDG-----IVYDGLSDVYNKIH 530 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~ 530 (814)
++|+++|+||++||..|+++|++|.+|++|+||+|+||+.|+...... ...+.....+. +....+.......+
T Consensus 81 ~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T d1ulqa1 81 CTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTES 160 (273)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCC
T ss_pred EEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhccccccc
Confidence 999999999999999999999999999999999999999997654322 11221111111 11122223445678
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATV 609 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~ 609 (814)
|+++||+++++||||||+||+|+++||+++..+..+++|.+|++|+++.+..+ .+.+++|+.+| .+++|+|.+|||+
T Consensus 161 m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~~~--~~~v~~d~~~r~~tt~e~La~L~p~ 238 (273)
T d1ulqa1 161 MGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTSLEKLAALRPV 238 (273)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTE--EEEECSCSCCCTTCCHHHHHHSCBS
T ss_pred hHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccccC--ceEEeCCCCcCCCCCHHHHccCCCC
Confidence 99999999999999999999999999999999999999999999998766543 46789999998 6999999999999
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCC
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA 645 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~ 645 (814)
|.+ .|++|++|||+++|||||+||+|+++|+++|+
T Consensus 239 f~~-~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 239 FRE-GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp SST-TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred cCC-CCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 975 89999999999999999999999999999986
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=2e-47 Score=399.02 Aligned_cols=257 Identities=30% Similarity=0.433 Sum_probs=229.7
Q ss_pred CCCCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHH-cCCCCcCcceEEEEecccCC-CCChHHHHHHHHcCC
Q psy12877 375 SKPGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAG-LGQAPCRQAVIFAGL 451 (814)
Q Consensus 375 ~~~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~d-AGl~~~dID~vivG~~~~~~-~~~~~a~~~a~~~Gl 451 (814)
+++++|||||+.||||++. +|.+++.++.||+..+++++|++ +||++++||.+++|++.+.. .+++++|.+++..|+
T Consensus 2 ~n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~ 81 (262)
T d1wdkc1 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (262)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhc
Confidence 4578999999999999986 56789999999999999999996 89999999999999998764 578999999999999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
|..+|+++|+++|+||++||..|+++|++|.+|+||+||+|+||+.|+.... .......+.+......|
T Consensus 82 p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~-----------~~~~~~~~~~~~~~~~m 150 (262)
T d1wdkc1 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV-----------DPNPHMSLYAAKASGMM 150 (262)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB-----------CCCGGGGGTSCGGGGSH
T ss_pred ccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccccccccc-----------cccccccccccccccch
Confidence 9999999999999999999999999999999999999999999998864221 11122233445556779
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVF 610 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f 610 (814)
|++||+++++||++||++|+|++.||+++.+++.+++|++||+|+++.+..+.. .+++.|+.+| .+|+|+|.+|||+|
T Consensus 151 g~tae~~a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~~~-~~~~~De~~R~~tt~E~La~LkP~f 229 (262)
T d1wdkc1 151 GLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETIRPDTTLESLAALKPAF 229 (262)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCE-EEECSCTTCCTTCCHHHHHTSCCSS
T ss_pred hhhHHHHHHHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccccc-cccccccCCCCCCCHHHHcCCCCcc
Confidence 999999999999999999999999999999999999999999999988776653 4578899999 69999999999999
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKF 643 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~ 643 (814)
.++.|++|++|||+++|||+|+||+|+|+|++|
T Consensus 230 ~~~~GtvTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 230 NPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred cCCCCcCcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 865799999999999999999999999999986
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-47 Score=400.04 Aligned_cols=259 Identities=31% Similarity=0.464 Sum_probs=226.9
Q ss_pred ccCCCCceeEeceeeccccc-CCCCCCCCCHHHHHHHHHHHHHHHc----CCCCcCcceEEEEecccCCCCChHHHHHHH
Q psy12877 373 FASKPGDVFIVSGSRTPMGS-FRSSLVSLSATKLGAVAIESAIQKA----NMDKSDVQEVYMGNVCQAGLGQAPCRQAVI 447 (814)
Q Consensus 373 ~~~~~~~V~IvG~~rTp~~~-~~g~~~~~~~~eLa~~A~~~AL~dA----Gl~~~dID~vivG~~~~~~~~~~~a~~~a~ 447 (814)
+++.+++||||++.||||++ +.|.|+++++.+|+..+++++|+++ |++|++||.+++|++.+.+.+.+++|++++
T Consensus 5 ~~~~~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al 84 (269)
T d1afwa1 5 LEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACL 84 (269)
T ss_dssp TSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHH
T ss_pred hhCCCCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhh
Confidence 45678999999999999997 6899999999999999999999864 699999999999999887777889999999
Q ss_pred HcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccc
Q psy12877 448 FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYN 527 (814)
Q Consensus 448 ~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (814)
..|+|..+|+++|+++|+||++||..|++.|++|.+|++|++|+|+||+.|.......... .............
T Consensus 85 ~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~~~------~~~~~~~~~~~~~ 158 (269)
T d1afwa1 85 ASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMIS------SEELQKNREAKKC 158 (269)
T ss_dssp HTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCC------CHHHHHCTTGGGG
T ss_pred hccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccccccccccccccccc------cchhccccccccc
Confidence 9999999999999999999999999999999999999999999999999886543211111 0111222334455
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcc
Q psy12877 528 KIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 606 (814)
Q Consensus 528 ~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~ 606 (814)
..+||++||+++++||||||++|+|++.||++|..+..+++|.+||+|+++.+. .+++.||.+| .+|+|+|.+|
T Consensus 159 ~~~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~-----~~~~~De~~R~~tt~E~La~L 233 (269)
T d1afwa1 159 LIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG-----SICQSDEGPRPNVTAESLSSI 233 (269)
T ss_dssp GSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTS-----CEECSCSSCCSCCCHHHHHHC
T ss_pred ccccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceecccc-----cEEecCCCcCCCCCHHHHcCC
Confidence 678999999999999999999999999999999999999999999999987643 3689999998 6999999999
Q ss_pred ccccccCCCccccCCCCccchhhhhhhhcCHHHHHH
Q psy12877 607 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 642 (814)
Q Consensus 607 ~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~ 642 (814)
||+|.++.|++|++|+|+++|||||+||+|+++|++
T Consensus 234 ~P~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 234 RPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp CBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred CCccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 999976679999999999999999999999999986
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=2.7e-39 Score=338.50 Aligned_cols=214 Identities=41% Similarity=0.658 Sum_probs=194.0
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc-cCccc
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETK 79 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~-~~~~~ 79 (814)
+||+++.+.++|++|++++.+|++..+|+++|+++|+||++||.+|+++|++|++|+||+||+|+||+.|+... +....
T Consensus 54 ~G~~~~~~~~~n~ar~~al~aglp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~ 133 (268)
T d1m3ka1 54 LGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVK 133 (268)
T ss_dssp EECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCS
T ss_pred EeeccccCcchHHHhHHHHHhCCcccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCc
Confidence 58999988899999999999999999999999999999999999999999999999999999999999998654 33344
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
.+.....+.+..+++.+++....|+.+||+++++||||||+||+||+.||+||..|+++|+|++||+|+..+.++|. ..
T Consensus 134 ~~~~~~~~~~~~~~l~d~~~~~~Mg~~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~g~-~~ 212 (268)
T d1m3ka1 134 MGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGD-IT 212 (268)
T ss_dssp SSCEEEEEHHHHHHTBCTTTCSBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCC-EE
T ss_pred CCCcccccccccccCcCcccCCcHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCCCC-eE
Confidence 44444445555667788888889999999999999999999999999999999999999999999999998877653 56
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN 216 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g 216 (814)
++.|+++|+++|+|+|.+++|+|++ +|.+|++|||+++|||+|+||+|+++|+++|
T Consensus 213 v~~d~~~r~~tt~e~L~~L~p~f~~-~GtvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 213 VDADEYIRHGATLDSMAKLRPAFDK-EGTVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp ECSCSSCCTTCCHHHHHTCCBSSCT-TCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred EeCCCCCCCCCCHHHHcCCCCCcCC-CCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 7999999999999999999999965 4999999999999999999999999999986
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=2.8e-38 Score=329.42 Aligned_cols=204 Identities=28% Similarity=0.405 Sum_probs=184.1
Q ss_pred CcccccCC-CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCccc
Q psy12877 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETK 79 (814)
Q Consensus 1 ~g~~~~~~-~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~ 79 (814)
+||+++.+ .++|++|++++.+|++..+|+++|+++|+||++||.+|+++|++|++|+||+||+|+||+.|+.....
T Consensus 58 ~G~v~~~~~~g~n~aR~~al~ag~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~--- 134 (262)
T d1wdkc1 58 WGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVD--- 134 (262)
T ss_dssp EECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBC---
T ss_pred EEeecccccccccchhhhHhhhhcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccccccccccc---
Confidence 58998876 58999999999999999999999999999999999999999999999999999999999998743211
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
......+.++.....|++++++++++|||+||++|+||+.||++|.+++++|+|++||+|+.++++++....
T Consensus 135 --------~~~~~~~~~~~~~~~mg~tae~~a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~~~~~ 206 (262)
T d1wdkc1 135 --------PNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKI 206 (262)
T ss_dssp --------CCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEE
T ss_pred --------ccccccccccccccchhhhHHHHHHHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccccccc
Confidence 111222334455567999999999999999999999999999999999999999999999999988888888
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKF 215 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~ 215 (814)
++.||.+|+++|+|+|.++||+|++.+|.+|++|||+++|||+|+||+|+++|++|
T Consensus 207 ~~~De~~R~~tt~E~La~LkP~f~~~~GtvTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 207 FDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp ECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred cccccCCCCCCCHHHHcCCCCcccCCCCcCcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 99999999999999999999999766799999999999999999999999999986
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.3e-37 Score=325.69 Aligned_cols=215 Identities=33% Similarity=0.557 Sum_probs=184.0
Q ss_pred CcccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccC--c
Q psy12877 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG--E 77 (814)
Q Consensus 1 ~g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~--~ 77 (814)
+||+++.+. ++|++|++++.+|+|..+|++||+++|+||++||.+|+++|++|++|++|+||+|+||+.|+...+. +
T Consensus 51 ~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~ 130 (273)
T d1ulqa1 51 AGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERG 130 (273)
T ss_dssp EECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSS
T ss_pred EEeccccccccccHHHHHHHHcCCCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhcccccccc
Confidence 589999774 7899999999999999999999999999999999999999999999999999999999999865432 2
Q ss_pred ccCCCCcccccccc-----cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecC
Q psy12877 78 TKYGGMNLIDGIVY-----DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQ 152 (814)
Q Consensus 78 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~ 152 (814)
...+.....+.... ..+.++.....|+++||+++++||||||+||+||++||++|..|+++|+|.+||+|+...+
T Consensus 131 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~ 210 (273)
T d1ulqa1 131 FPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKR 210 (273)
T ss_dssp SCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEE
T ss_pred ccCCCcccccccccccccchhhhccccccchHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeecccc
Confidence 22222222221111 1222334456799999999999999999999999999999999999999999999998866
Q ss_pred CCCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC
Q psy12877 153 RKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA 217 (814)
Q Consensus 153 ~~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~ 217 (814)
+++ ...+++|+.+|+++|+|+|.+++|+|+ ++|++|++|||+++|||+|+||+|+++|+++|+
T Consensus 211 ~~~-~~~v~~d~~~r~~tt~e~La~L~p~f~-~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 211 GKE-EILVEQDEGPRRDTSLEKLAALRPVFR-EGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp TTE-EEEECSCSCCCTTCCHHHHHHSCBSSS-TTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred ccC-ceEEeCCCCcCCCCCHHHHccCCCCcC-CCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 543 356789999999999999999999995 469999999999999999999999999999985
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-37 Score=325.51 Aligned_cols=204 Identities=31% Similarity=0.470 Sum_probs=176.5
Q ss_pred CcccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 1 ~g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
+||+++.+.++|++|++++.+|+|..+|+++|+++|+||++||.+|++.|++|++|++|+||+|+||+.|....... +
T Consensus 66 ~G~v~~~g~~~~~aR~~al~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~--~ 143 (269)
T d1afwa1 66 CGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLG--M 143 (269)
T ss_dssp EECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTC--S
T ss_pred eccccccccccccchhhhhhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccccccccccccc--c
Confidence 58999988888999999999999999999999999999999999999999999999999999999999886443211 1
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
... ......+.++....+|+++||+++++||||||++|+||+.||++|..++++|+|.+||+|++.+.+ .++
T Consensus 144 ~~~----~~~~~~~~~~~~~~~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~----~~~ 215 (269)
T d1afwa1 144 ISS----EELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG----SIC 215 (269)
T ss_dssp CCC----HHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTS----CEE
T ss_pred ccc----chhcccccccccccccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceecccc----cEE
Confidence 100 001112233444568999999999999999999999999999999999999999999999988643 478
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~ 214 (814)
+.||.+|+++|+|+|.+++|+|.+.+|.+|++|||+++|||+|+||+|+++|++
T Consensus 216 ~~De~~R~~tt~E~La~L~P~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 216 QSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp CSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred ecCCCcCCCCCHHHHcCCCCccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 999999999999999999999977779999999999999999999999999985
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3e-32 Score=245.86 Aligned_cols=123 Identities=40% Similarity=0.630 Sum_probs=120.2
Q ss_pred cCCCccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccc
Q psy12877 215 FNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSL 294 (814)
Q Consensus 215 ~g~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~ 294 (814)
+|++|+|+|++++.++.+|..|+.+|+.|++++|+++|++++|||+||+||+|+.|++.++++|+++++++|++||++++
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAl 80 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIAL 80 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHH
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCcccee
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHcCCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 295 GHPIGMSGARIVIHLCHALKSGQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 295 Ghp~gasG~~~l~e~v~qLr~g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||+|+||+|++++++++|+++++|++++ |+|||+|.+++||+
T Consensus 81 GHP~GaSGarlv~~l~~~L~~~~~glas~----------------C~ggG~G~a~~ier 123 (124)
T d1afwa2 81 GHPLGCTGARQVATILRELKKDQIGVVSM----------------CIGTGMGAAAIFIK 123 (124)
T ss_dssp CBCTTTHHHHHHHHHHHHSCTTCEEEEEE----------------EETTTEEEEEEEEE
T ss_pred cCCcCCchHHHHHHHHHHhccCCEEEEEE----------------cccCCcEEEEEEEe
Confidence 99999999999999999999888999998 99999999999985
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.97 E-value=1e-31 Score=241.97 Aligned_cols=121 Identities=38% Similarity=0.560 Sum_probs=118.3
Q ss_pred CCccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccC
Q psy12877 217 AKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGH 296 (814)
Q Consensus 217 ~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Gh 296 (814)
++|+|+|++++..+.+|..|+.+|+.|++++|+++|++++|||+||+||+|+.|.+.+.++|+++++++|++||++++||
T Consensus 1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGH 80 (124)
T d1m3ka2 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGH 80 (124)
T ss_dssp CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCC
T ss_pred CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCcccccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 297 PIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 297 p~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|+|+||+|++.+++++|++ +++|++++ |+|||+|.+++||.
T Consensus 81 P~GaSGarl~~tl~~~L~~~~~~~Glas~----------------C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 81 PIGASGARILNTLLFEMKRRGARKGLATL----------------CIGGGMGVAMCIES 123 (124)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTCSEEEEEE----------------EETTTEEEEEEEEC
T ss_pred CcCccchhHHHHHHHHHHhcCCCEEEEEe----------------cccccceeEEEEEe
Confidence 9999999999999999998 88999998 99999999999984
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.96 E-value=5.2e-31 Score=237.68 Aligned_cols=120 Identities=35% Similarity=0.574 Sum_probs=115.6
Q ss_pred CccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhh--cCCCCCCcccCCCCcccc
Q psy12877 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK--LDIDPSKVNVHGGAVSLG 295 (814)
Q Consensus 218 ~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~--lg~~~~~vN~~GG~la~G 295 (814)
||+|+|++++..+.+|..|+.+|+.|++++|+++|++++|||+||+||+|+.|++.++++ ++++++++|++||++++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlG 80 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALG 80 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHC
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCccccc
Confidence 689999999999999999999999999999999999999999999999999999999999 566788999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 296 HPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 296 hp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
||+|+||+|++++++++|++ +++|++++ |+|||+|.+++||.
T Consensus 81 HP~GASGari~~tl~~~L~~~~~~~G~as~----------------C~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 81 HPLGASGARILTTLVHEMRRRKVQFGLATM----------------CIGVGQGIAVVVEG 124 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSEEEEEE----------------EETTTEEEEEEEEE
T ss_pred CCccccchhHHHHHHHHHHhcCCCEEEEEe----------------cccccceeEEEEEe
Confidence 99999999999999999998 88999998 99999999999984
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.96 E-value=2.7e-30 Score=234.32 Aligned_cols=122 Identities=35% Similarity=0.520 Sum_probs=116.5
Q ss_pred CCCccEEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCC---CCCcccCCCCc
Q psy12877 216 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDID---PSKVNVHGGAV 292 (814)
Q Consensus 216 g~~p~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~---~~~vN~~GG~l 292 (814)
|++|+++|++++..+.+|..|+.+|+.|++++|+++|++++|||+||+||+|+.+.+.+++++++. .+++|++||++
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGai 80 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAI 80 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHH
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcc
Confidence 689999999999999999999999999999999999999999999999999999999999998763 36899999999
Q ss_pred cccCCCCChHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 293 SLGHPIGMSGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 293 a~Ghp~gasG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++|||+|+||+|++.+++++|++ +++|++++ |+|||+|.|++||.
T Consensus 81 AlGHP~GASGaRlv~~l~~~L~~~~~~~Glas~----------------C~gGG~g~A~~iEr 127 (128)
T d1wdkc2 81 ALGHPFGCSGARISGTLLNVMKQNGGTFGLSTM----------------CIGLGQGIATVFER 127 (128)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEE----------------EETTTEEEEEEEEC
T ss_pred cccccccccchhHHHHHHHHHHhcCCCEEEEEe----------------cccccceeEEEEEe
Confidence 99999999999999999999998 88999998 99999999999984
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.42 E-value=4.3e-13 Score=133.37 Aligned_cols=172 Identities=17% Similarity=0.059 Sum_probs=126.3
Q ss_pred cCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-----CCCcHHHHHHHHHHHc
Q psy12877 177 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPTLLKNG 251 (814)
Q Consensus 177 ~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~~~~~a~~~al~~a 251 (814)
++||+....+|++ ++||++++||.+.+.|++.+.+++++|.|++...+.... .+.+...+++++|+++
T Consensus 6 ~~rpFD~~adG~v-------~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a 78 (205)
T d1tqya2 6 ASRPFDGTRDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDES 78 (205)
T ss_dssp CCCTTBTTCCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCccCCCCCEe-------eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhh
Confidence 3556665555666 669999999999999999999999999999987653322 2233467899999999
Q ss_pred CCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCCCC--
Q psy12877 252 GVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQ-- 320 (814)
Q Consensus 252 Gl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl-- 320 (814)
+++++|||+||.|..-+.. ++..+ +.++-..+++.++.-+-.+||..+++|+..++.++.+|+. ....+
T Consensus 79 ~i~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~ 158 (205)
T d1tqya2 79 RTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRT 158 (205)
T ss_dssp TCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCS
T ss_pred cCCccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCC
Confidence 9999999999999987754 22222 3344333455565666669999999999999999999997 22122
Q ss_pred -------ccccccCccccccccceeEEecCCcceeEEEecCc
Q psy12877 321 -------LSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 321 -------~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
..+.+...+...+++..+.++.||...+++|+.+.
T Consensus 159 ~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 159 SDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp BBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEeeCC
Confidence 11122333334567777888889999999998643
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.42 E-value=9.1e-13 Score=129.69 Aligned_cols=168 Identities=17% Similarity=0.096 Sum_probs=122.4
Q ss_pred cCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC-CccEEEEEEEEecCCC--CCCCCcHHHHHHHHHHHcCC
Q psy12877 177 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATEP--IDFPIAPAFAIPTLLKNGGV 253 (814)
Q Consensus 177 ~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~-~p~a~I~g~~~~~~~p--~~~~~~~~~a~~~al~~aGl 253 (814)
+++|+.+..+|++ ++||++++||.+.+.|++++. +++++|.|++...+.. .....+...+++++|+++|+
T Consensus 5 ~~rPFD~~a~G~~-------~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 5 AYLPFDERAAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGT 77 (194)
T ss_dssp SCCTTSTTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTC
T ss_pred CcCcccCCCCCEe-------eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccc
Confidence 4667765555666 779999999999999999986 5889999999876532 22234567899999999999
Q ss_pred CCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCCCCccc-
Q psy12877 254 AKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ- 323 (814)
Q Consensus 254 ~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~- 323 (814)
+++|||++|.|...+.. ++..+ +.|| .+.+.++--+-.+||..+++|+..++.++.+|+. ...++...
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~--~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~ 155 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFG--REGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVP 155 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHC--TTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCC
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhh--ccccccccccccccccccccccceehhhhhhhhhceeccccCCCCCC
Confidence 99999999999887764 22222 3344 3334444455668999999999999999999997 22222211
Q ss_pred ------ccc--CccccccccceeEEecCCcceeEEEec
Q psy12877 324 ------FWY--DENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 324 ------~~~--~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++. ..+...+++..+.++.||...+++|++
T Consensus 156 ~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 156 REYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp GGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 111 122335677788888899999999985
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=7.5e-11 Score=120.69 Aligned_cols=92 Identities=25% Similarity=0.319 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl 451 (814)
...|+..++.+||+|+|+++++.+ ++++|+..... ....++..++..+|+
T Consensus 72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 151 (250)
T d2gfva1 72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence 466888999999999999877655 36777543210 012356678888999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
. .|.++++++|+||+.||.+|+++|++|++|++||||+|...
T Consensus 152 ~--Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~ 193 (250)
T d2gfva1 152 R--GPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAS 193 (250)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred C--CCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhc
Confidence 4 79999999999999999999999999999999999998653
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.03 E-value=6.8e-11 Score=120.95 Aligned_cols=93 Identities=22% Similarity=0.353 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
+...++..++.+||+|+|+++++++ ++++|+..+.. .....+..++...|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 3456788999999999999987765 57888643321 01235567888889
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
+. .|.++++++|+||+.||.+|+++|++|++|++||+|+|...
T Consensus 150 l~--Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~ 192 (249)
T d1j3na1 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAI 192 (249)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred CC--CCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhh
Confidence 94 68999999999999999999999999999999999999753
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=1e-09 Score=105.68 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=90.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..+...+|++ ..+++.++.+|+++..+|..|...|
T Consensus 48 ~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~~i 126 (174)
T d1hnja1 48 NETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYV 126 (174)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHHHH
Confidence 578999999999999999999999999999998877766678899999999997 5899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++.+|+++.|..|.
T Consensus 127 ~sg~~~~~Lvv~~e~~S~ 144 (174)
T d1hnja1 127 KSGAVKYALVVGSDVLAR 144 (174)
T ss_dssp HTTSCSEEEEEEEECHHH
T ss_pred hcCCcceeEEEeeehhhc
Confidence 999999999999998763
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.90 E-value=5.3e-10 Score=114.24 Aligned_cols=92 Identities=21% Similarity=0.285 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCc-----ceEEEEecccCC---------------------------CCChHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDV-----QEVYMGNVCQAG---------------------------LGQAPCRQAVIFA 449 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dI-----D~vivG~~~~~~---------------------------~~~~~a~~~a~~~ 449 (814)
...+...+..+|++++++..... =++++|+..... ....++..++...
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 150 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence 34578889999999999875322 145666543210 0123455677778
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
|+ +.|.++++++|+||+.||.+|+++|++|++|++||+|+|.+.
T Consensus 151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~ 194 (253)
T d2vbaa1 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC 194 (253)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhh
Confidence 88 579999999999999999999999999999999999999764
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.89 E-value=2.6e-09 Score=100.95 Aligned_cols=134 Identities=16% Similarity=0.103 Sum_probs=96.9
Q ss_pred CccEEEEEEEEecCCC-----CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHhhh-cCCCCCCccc
Q psy12877 218 KPLARIIAYFDAATEP-----IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANIKK-LDIDPSKVNV 287 (814)
Q Consensus 218 ~p~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~e~-lg~~~~~vN~ 287 (814)
+++++|+|++.+++.- ..-+.+...+++++|+++|++++|||++|.|..-+.. ++..++. +| +++.+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg---~~~~v 77 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG---KEVPV 77 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC---SSSEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC---CcccC
Confidence 4689999999987633 2234445689999999999999999999999987753 3344433 33 34445
Q ss_pred CCCCccccCCCCChHHHHHHHHHHHHHc----CCCCCccc---------cccCccccccccceeEEecCCcceeEEEecC
Q psy12877 288 HGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ---------FWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 288 ~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~---------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+.-+-.+||+.+++|+..++.++.+|+. +...+... .+.......+++..++++.||.+.+++|++.
T Consensus 78 ~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 78 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 5555569999999999999999999997 22222111 1222233356788888889999999999864
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.88 E-value=2.9e-09 Score=103.04 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 398 VSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 398 ~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
.+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|.+ ...++.++.+|+++..+|..|...
T Consensus 54 ~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~~~aL~~A~~~ 132 (181)
T d1mzja1 54 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADA 132 (181)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHH
T ss_pred cCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCC-CccceeHHhhhccHHHHHHHHhCH
Confidence 3578999999999999999999999999999998877666677888889899987 578999999999999999999999
Q ss_pred HHcCCCCeEEEEeeecccc
Q psy12877 478 LSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~ 496 (814)
|++|.+..+|+++.|.+|.
T Consensus 133 i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 133 VESGGSRHVLVVATERMTD 151 (181)
T ss_dssp HHHSSCSCEEEEEEEEGGG
T ss_pred hhcCCCceeEEeeeccccc
Confidence 9999999999999998863
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=1.2e-09 Score=111.47 Aligned_cols=55 Identities=31% Similarity=0.432 Sum_probs=51.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
..++.+++..+|+ ..|.++|+++|+||+.||.+|+++|++|++|++||||+|...
T Consensus 139 ~~~a~~ia~~~gl--~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~ 193 (250)
T d2gfva1 139 NMVAGHLTIMYGL--RGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAS 193 (250)
T ss_dssp THHHHHHHHHTTC--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred hHHHHHHHHHhCC--CCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhc
Confidence 4578899999999 699999999999999999999999999999999999999754
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.86 E-value=7.2e-10 Score=120.05 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=113.4
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+..+.+++..+|++..+..+.++ .+|++++.+|..|..+|++|..+.+|++++|.+|......
T Consensus 127 ~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~~~~--------------- 191 (372)
T d1teda_ 127 APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFA--------------- 191 (372)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCCCC---------------
T ss_pred CchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccccCC---------------
Confidence 467899999999998777777775 5899999999999999999999999999999866421100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
|
T Consensus 192 --------------------------------------------------------------------------d----- 192 (372)
T d1teda_ 192 --------------------------------------------------------------------------D----- 192 (372)
T ss_dssp --------------------------------------------------------------------------S-----
T ss_pred --------------------------------------------------------------------------C-----
Confidence 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-CCCC----------C-
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-EPID----------F- 236 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-~p~~----------~- 236 (814)
..++. ...+.++|||+|+||...+....... ....+.+...... +... +
T Consensus 193 --~~~~~----------------~~~~lfGDGAaA~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T d1teda_ 193 --DINDV----------------VIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGIT 253 (372)
T ss_dssp --SHHHH----------------HHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEE
T ss_pred --cchhh----------------hhhhhhcccceeEEeccCCcccccCC-ceeEEecccccccCCCccccccCCCCCcce
Confidence 00000 00112579999999976543222211 1223444332111 0000 0
Q ss_pred ---C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcc
Q psy12877 237 ---P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVN 286 (814)
Q Consensus 237 ---~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN 286 (814)
+ .....+++++|+++|++++|||+|-+|.......-...+.||++++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~ 314 (372)
T d1teda_ 254 CELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAA 314 (372)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGH
T ss_pred eechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHHHHHHHHHcCCCHHHhh
Confidence 0 0114578999999999999999999999999888889999999988763
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.86 E-value=6.4e-10 Score=113.41 Aligned_cols=91 Identities=21% Similarity=0.254 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl 451 (814)
...++..++.+||+++|++++.+. ++++|+..... .....+..++..+|+
T Consensus 72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (250)
T d1e5ma1 72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence 356888999999999999876543 47777643210 012346677778898
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~ 494 (814)
..|.++++++|+||+.||..|+++|++|++|.+||||+|..
T Consensus 152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~ 192 (250)
T d1e5ma1 152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAA 192 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred --CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhh
Confidence 47999999999999999999999999999999999999974
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.83 E-value=6.8e-09 Score=99.48 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|++++|||.+++++..+....+..+..++..+|. ..+++.++.+|++++.+|..|...|
T Consensus 46 ~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~~~ 123 (172)
T d1ub7a1 46 DEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALV 123 (172)
T ss_dssp TCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhhhh
Confidence 57889999999999999999999999999998876655566778888888995 4689999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++.+|++++|.+|.
T Consensus 124 ~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 124 EAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp HTTSCSEEEEEEEECGGG
T ss_pred hcCCcceeEEeccccccc
Confidence 999999999999998874
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.83 E-value=8.5e-09 Score=105.82 Aligned_cols=55 Identities=29% Similarity=0.417 Sum_probs=51.5
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
.+++.+++..+|+ ..|.++|+++|+|++.||.+|+++|++|++|++||||+|...
T Consensus 156 ~~~a~~is~~~~l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~ 210 (270)
T d2ix4a1 156 NMASGHVSMKYGF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI 210 (270)
T ss_dssp THHHHHHHHHHTC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred chhHHHHHHHhCC--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhh
Confidence 4588899999999 699999999999999999999999999999999999999854
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=98.82 E-value=2.1e-09 Score=109.62 Aligned_cols=56 Identities=27% Similarity=0.442 Sum_probs=51.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++..++..+|+ ..|.++++++|+|++.||.+|+++|++|++|++||||+|....
T Consensus 138 ~~~~~~is~~~gl--~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~ 193 (249)
T d1j3na1 138 NMASAHIAMRYGF--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193 (249)
T ss_dssp THHHHHHHHHHTC--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred hhhhhhhHhhcCC--CCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhC
Confidence 4577789999999 6999999999999999999999999999999999999997543
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.81 E-value=6.6e-09 Score=98.40 Aligned_cols=137 Identities=14% Similarity=0.055 Sum_probs=97.7
Q ss_pred CccEEEEEEEEecCCC-----CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHhhh-cCCCCCCccc
Q psy12877 218 KPLARIIAYFDAATEP-----IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANIKK-LDIDPSKVNV 287 (814)
Q Consensus 218 ~p~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~e~-lg~~~~~vN~ 287 (814)
+++++|.|++.+++.. ...+.+...+++++|+++|++++|||++|.|..-+.. ++..++. |+-..+++.+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 4689999999987643 2233445789999999999999999999999887753 3444443 4433334555
Q ss_pred CCCCccccCCCCChHHHHHHHHHHHHHc----CCCCCccc---------cccCccccccccceeEEecCCcceeEEEecC
Q psy12877 288 HGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ---------FWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 288 ~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~---------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+.-+-.+||..+++|+..++.++.+|+. ...++... .+...+...+++..+.++.||.+.+++|++.
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~y 160 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEeee
Confidence 5556668999999999999999999997 22222111 1111222355777888888999999999864
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=4.2e-09 Score=107.39 Aligned_cols=55 Identities=24% Similarity=0.341 Sum_probs=51.1
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
..++..++..+|+ ..|.++++++|+||+.||.+|+++|++|++|++||||+|.+.
T Consensus 140 ~~~a~~is~~~g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~ 194 (253)
T d2vbaa1 140 SGVSACLATPFKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC 194 (253)
T ss_dssp THHHHHHHTTTTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred ccccceeccccCc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhh
Confidence 4578889999999 699999999999999999999999999999999999999754
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.76 E-value=1.3e-08 Score=103.53 Aligned_cols=54 Identities=24% Similarity=0.279 Sum_probs=50.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 66 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~ 66 (814)
..++..++..+|+ ..|.++++++|+||+.||.+|+++|++|++|.+||||+|..
T Consensus 139 ~~~a~~is~~~gl--~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~ 192 (250)
T d1e5ma1 139 NMASGLTAINLGA--KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAA 192 (250)
T ss_dssp THHHHHHHHHHTC--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred chhhhhHHHhccC--CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhh
Confidence 4478888999999 69999999999999999999999999999999999999974
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.74 E-value=2e-08 Score=98.51 Aligned_cols=95 Identities=16% Similarity=0.070 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|++++|||.+++.+..+. .-+..+..+...+|++.....+.+ +.+|+++..+|..|.+.|+
T Consensus 74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~-~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~ 152 (200)
T d1u0ma1 74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-MMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCT 152 (200)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC-CSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCC-CcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999876543 356678888999999877788887 5789999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|..+.||+++.|.+|.
T Consensus 153 ~~~~~~vLvv~~e~~S~ 169 (200)
T d1u0ma1 153 AYPEANALIVACEFCSL 169 (200)
T ss_dssp HSTTCEEEEEEEEEGGG
T ss_pred hCCCCEEEEEEEecccc
Confidence 99999999999999874
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=1.7e-08 Score=95.63 Aligned_cols=136 Identities=13% Similarity=0.091 Sum_probs=95.5
Q ss_pred CccEEEEEEEEecCCC-----CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCccc
Q psy12877 218 KPLARIIAYFDAATEP-----IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNV 287 (814)
Q Consensus 218 ~p~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~ 287 (814)
+.+++|+|++.+.+.. ...+.+...+++++|+++|++++|||++|.|..-+.. ++..+ +.|+-..+++-+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 4689999999987642 2233444679999999999999999999999887753 33333 334433344555
Q ss_pred CCCCccccCCCCChHHHHHHHHHHHHHc----CCCCCccc----------cccCccccccccceeEEecCCcceeEEEec
Q psy12877 288 HGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ----------FWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 288 ~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~----------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+.-+-.+||..+++|+..++.++.+|+. ....+... .+..+....+++..+.++.||.+++++||+
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 5556669999999999999999999997 21111111 011112224677788888899999999974
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=98.71 E-value=1.5e-08 Score=95.76 Aligned_cols=136 Identities=17% Similarity=0.184 Sum_probs=95.3
Q ss_pred CccEEEEEEEEecCC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHhh-hcCCCCCCccc
Q psy12877 218 KPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANIK-KLDIDPSKVNV 287 (814)
Q Consensus 218 ~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~e-~lg~~~~~vN~ 287 (814)
+.+++|.|++.+.+. |...+.+...+++++|+++|++++|||++|.|..-+.. ++..++ .|+-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 467899999998763 33334455789999999999999999999999987753 233332 22212234445
Q ss_pred CCCCccccCCCCChHHHHHHHHHHHHHc----CCCCCccc------cccC--ccccccccceeEEecCCcceeEEEec
Q psy12877 288 HGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ------FWYD--ENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 288 ~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~------~~~~--~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
..-+-.+||..+++|+..++.++.+|+. ....+... ++.. .+...+++..+.++.||.+++++||+
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 5555669999999999999999999987 22111111 0111 12336678888888899999999985
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.68 E-value=9.5e-09 Score=101.52 Aligned_cols=90 Identities=26% Similarity=0.335 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl 451 (814)
...|+..++.+||+|+|+++++++ ++++|+..+.. .....+..++..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 456888899999999999987765 47777643210 011346678889999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~ 494 (814)
. .|.++++++|+||+.||..|+++|++| +|++||||+|.+
T Consensus 150 ~--Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 150 R--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp C--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred c--ceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 4 799999999999999999999999999 899999999974
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.68 E-value=1.4e-08 Score=100.77 Aligned_cols=92 Identities=22% Similarity=0.334 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC-----------------------C---------CChHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG-----------------------L---------GQAPCRQ 444 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~-----------------------~---------~~~~a~~ 444 (814)
+...|+..|+++||+|||+++++++. ++++...... . ...++..
T Consensus 70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 149 (216)
T d1tqya1 70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 149 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence 35668899999999999999876553 5555432110 0 0124677
Q ss_pred HHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc
Q psy12877 445 AVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494 (814)
Q Consensus 445 ~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~ 494 (814)
++..+|+ ..|.++++.+|+||++||.+|+++|++|++|++||||+|+.
T Consensus 150 ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~ 197 (216)
T d1tqya1 150 VAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP 197 (216)
T ss_dssp HHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred HHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 8888999 47999999999999999999999999999999999999975
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.62 E-value=5.2e-08 Score=92.11 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=93.1
Q ss_pred cEEEEEEEEecCC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCC--CCCccc
Q psy12877 220 LARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDID--PSKVNV 287 (814)
Q Consensus 220 ~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~--~~~vN~ 287 (814)
|++|.|++.+.+. |...+.+...+++++|++++++++|||++|.|..-+.. ++..+ +.|+-. ..++.+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 4799999998763 33333444678999999999999999999999887753 23333 223321 124445
Q ss_pred CCCCccccCCCCChHHHHHHHHHHHHHc----CCCCCccc---------cccC-ccccccccceeEEecCCcceeEEEec
Q psy12877 288 HGGAVSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ---------FWYD-ENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 288 ~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~---------~~~~-~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+.-+-.+||+.+++|+..++.++.+|++ ...++... .+.. .....+++..+.++.||.+.+++|++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 5556668999999999999999999998 22222221 0111 11225677788888999999999974
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.55 E-value=2.2e-07 Score=93.18 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEE-EeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCT-TVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~-tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|++++|||.+++.+..+....+ ....+...+|+......+ .++.+|+++..+|..|.+.|+
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~-~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~ 179 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPG-ADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSC-HHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCc-cHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHH
Confidence 455799999999999999999999999999886544333 344555556665444445 457899999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|..+.||++++|..|.
T Consensus 180 ~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 180 NNKGARVLVVCSEVTAV 196 (235)
T ss_dssp TSTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEeeecce
Confidence 99999999999998874
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.50 E-value=1.3e-07 Score=101.71 Aligned_cols=94 Identities=17% Similarity=0.094 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+++|+++||+++|++++|||.++++++. ....+..+.+++..+|+++....+.++ .+|+++..+|..|...|+
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~ 169 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR 169 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHh
Confidence 456899999999999999999999999998764 344567889999999998666666665 589999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|..+.+|++++|.++
T Consensus 170 sg~~~~~LVV~~E~~s 185 (372)
T d1teda_ 170 AHPAMKALVVCIELCS 185 (372)
T ss_dssp HSTTCEEEEEEEEECG
T ss_pred cCCCccceeeeehhhc
Confidence 9999999999999876
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.34 E-value=4.2e-07 Score=86.17 Aligned_cols=96 Identities=18% Similarity=0.244 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+..|++++|++. ++++||.+++++..+....+..+..+...+|++....++.++.+|+++..+|..|...|
T Consensus 47 ~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~~i 124 (166)
T d1xpma1 47 NQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYL 124 (166)
T ss_dssp TCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccccchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhhHH
Confidence 5788999999999999875 47899999999887766667788889999999877899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|....+|+++.|..+.
T Consensus 125 ~~~~~~~alvV~sd~~~~ 142 (166)
T d1xpma1 125 ATRPNEKVLVIATDTARY 142 (166)
T ss_dssp TTCTTCEEEEEEEEEECC
T ss_pred hcCCCCeEEEEEEceEec
Confidence 999999999999997553
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.31 E-value=2.5e-07 Score=94.48 Aligned_cols=92 Identities=24% Similarity=0.286 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCcC-----cceEEEEecccC--------------------------CCCChHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSD-----VQEVYMGNVCQA--------------------------GLGQAPCRQAVIFAG 450 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~d-----ID~vivG~~~~~--------------------------~~~~~~a~~~a~~~G 450 (814)
....+..+..+|+.+++....+ ...+.++..... .....++..++..+|
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 4456777888999998764322 223333332211 011245678888899
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
+. .|.++++++|+|++.||.+|+++|++|++|++||||+|...
T Consensus 168 l~--Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~ 210 (270)
T d2ix4a1 168 FQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI 210 (270)
T ss_dssp CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred CC--CCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhh
Confidence 94 79999999999999999999999999999999999998753
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.18 E-value=3.2e-06 Score=78.47 Aligned_cols=129 Identities=11% Similarity=0.040 Sum_probs=87.4
Q ss_pred cEEEEEEEEecCCCCC---CCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHHHhh-hcCCCCCCcccCCCC
Q psy12877 220 LARIIAYFDAATEPID---FPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLANIK-KLDIDPSKVNVHGGA 291 (814)
Q Consensus 220 ~a~I~g~~~~~~~p~~---~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~e-~lg~~~~~vN~~GG~ 291 (814)
+++|.|++.+.+.... .+.+...+++++|+++ +.|||++|.|-.-+.. ++..++ .||- +++.+..-+
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~--~~~~v~s~K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD--KSPAISATK 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT--CCCEEECTH
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC--CCcccccch
Confidence 4799999998764321 2344567888888776 6799999999887642 333333 3442 333334445
Q ss_pred ccccCCCCChHHHHHHHHHHHHHc----CCCCCccc---------cccCccccccccceeEEecCCcceeEEEec
Q psy12877 292 VSLGHPIGMSGARIVIHLCHALKS----GQKGQLSQ---------FWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 292 la~Ghp~gasG~~~l~e~v~qLr~----g~~gl~~~---------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
-.+||..+++|+..++.++..|+. ....+... .+...+...+.+..+.++.||.+.+++|++
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 558999999999999999999987 22222111 111222335677788888899999999974
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.05 E-value=6e-07 Score=79.95 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=43.7
Q ss_pred CCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 644 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 644 g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
|++|+++|++|+.++++|..|+.+|+.|++++|+++++ .+|+|++|
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~E 47 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIE 47 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEE
Confidence 68999999999999999999999999999999999998 68999997
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.04 E-value=2.7e-06 Score=83.79 Aligned_cols=55 Identities=24% Similarity=0.310 Sum_probs=51.2
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
..++..++..+|+ ..|.++++.+|+||+.||.+|+++|++|++|++||||+|...
T Consensus 144 ~~~a~~ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l 198 (216)
T d1tqya1 144 SVMPAEVAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPI 198 (216)
T ss_dssp THHHHHHHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred hHHHHHHHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence 4578999999999 699999999999999999999999999999999999999753
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.04 E-value=2.1e-07 Score=82.54 Aligned_cols=47 Identities=28% Similarity=0.417 Sum_probs=44.7
Q ss_pred cCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 643 FNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 643 ~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|++|+++|++|+.++.+|..|+.+|+.|++++|+++++ .+|+|+.|
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~E 48 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFE 48 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEE
Confidence 589999999999999999999999999999999999999 68999987
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.03 E-value=2.2e-06 Score=83.91 Aligned_cols=53 Identities=25% Similarity=0.339 Sum_probs=49.5
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccC
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 66 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~ 66 (814)
..++.+++..+|+ ..|.++++++|+||+.||..|+++|++| +|++||||+|.+
T Consensus 137 ~~~a~~ia~~~gl--~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 137 AVNTGQISIRHGM--RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp THHHHHHHHHHTC--CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred ccccchhhhcccc--cceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 3478899999999 6999999999999999999999999999 999999999974
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=97.92 E-value=4e-07 Score=80.61 Aligned_cols=45 Identities=22% Similarity=0.345 Sum_probs=42.6
Q ss_pred CCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 645 AKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 645 ~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
++|+++|++|+.++.+|..|+.+|+.|++++|+++++ .+|+|++|
T Consensus 1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~E 46 (124)
T d1m3ka2 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVE 46 (124)
T ss_dssp CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHH
Confidence 5899999999999999999999999999999999999 68999987
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=97.72 E-value=1.1e-05 Score=76.58 Aligned_cols=58 Identities=17% Similarity=0.172 Sum_probs=54.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.++...+|++ +.+++.++.+|++++.+|..|..+|++|.++.+|+++.|..|.
T Consensus 87 ~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S~ 144 (174)
T d1hnja1 87 FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLAR 144 (174)
T ss_dssp SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHH
T ss_pred ccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhhc
Confidence 467999999999998 7999999999999999999999999999999999999998654
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=97.58 E-value=4.2e-05 Score=72.95 Aligned_cols=58 Identities=14% Similarity=0.132 Sum_probs=53.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+..++..+|.+ +.+++.++.+|+++..+|..|..+|++|.+..+|+++.|.+|.
T Consensus 94 ~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 94 TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTD 151 (181)
T ss_dssp SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG
T ss_pred cccHHHHHHHhhcCC-CccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccccc
Confidence 567888899999987 7899999999999999999999999999999999999998764
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=97.56 E-value=8.8e-06 Score=71.89 Aligned_cols=44 Identities=32% Similarity=0.338 Sum_probs=42.2
Q ss_pred CceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 646 ~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
||+++|++|+.++.+|.+|+.+|+.|++++|+++++ .+|+|++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~E 45 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIE 45 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchhe
Confidence 689999999999999999999999999999999999 69999998
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=97.19 E-value=0.00032 Score=66.03 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=51.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+..++..+|. ..+++.++.+|++.+.++..|..+|++|.+..+|+++.|.+|.
T Consensus 85 ~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 85 FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred ccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccccc
Confidence 45678888999995 5799999999999999999999999999999999999998775
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.97 E-value=0.00038 Score=63.72 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=42.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCccc
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNV 287 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~ 287 (814)
..+++++|+++|++++|||++-+|.+.....-...+.||++++++..
T Consensus 51 ~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~ 97 (148)
T d1u6ea2 51 GDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVA 97 (148)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEEC
T ss_pred HHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhh
Confidence 35889999999999999999999999999999999999999887544
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.58 E-value=0.0009 Score=61.24 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCccc
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNV 287 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~ 287 (814)
.+++++|+++|++++|||+|-+|.+.....-...+.||++++++..
T Consensus 51 ~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~ 96 (149)
T d1ub7a2 51 TATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAV 96 (149)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC
T ss_pred HHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHH
Confidence 5889999999999999999999999999999999999999987654
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.44 E-value=0.00083 Score=64.36 Aligned_cols=68 Identities=15% Similarity=0.058 Sum_probs=55.1
Q ss_pred ccchhhhhhhhcCHHHHHHcCC-CceEEEEEeeeccCCCC--CCCchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 624 TLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATEPI--DFPIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 624 ~~sDGAAAvvL~s~e~A~~~g~-~p~a~I~g~~~~~~~p~--~~~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
.++||++++||.+++.|+++|. ++++.|.|++...+... ....+...+++++|+++++ ..+++|.+-.
T Consensus 17 ~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i~~~di~~v~ah 88 (194)
T d1tqyb2 17 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFAD 88 (194)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred eeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccccccceeeeecc
Confidence 3999999999999999999997 58899999997755322 2234567899999999998 5899998743
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=96.38 E-value=0.0047 Score=60.76 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=47.3
Q ss_pred hHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 12 APCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
-++..+...+|+...+..+.+ +.+|++++.++..|..+|++|....||++++|..|.
T Consensus 139 ~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 139 GADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196 (235)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGG
T ss_pred ccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeecce
Confidence 355566667777656666654 889999999999999999999999999999998775
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.36 E-value=0.0019 Score=59.19 Aligned_cols=70 Identities=14% Similarity=0.093 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS 315 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~ 315 (814)
..+++++|+++|++++|||+|-+|.+.....-...+.||++++++-.. .-+-+|++++..+.-++.++..
T Consensus 51 p~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~-----~~~~~GNt~Sasip~~L~~~~~ 120 (153)
T d1mzja2 51 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR-----DAEDTGNTSSASVALALDRLVR 120 (153)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC-----THHHHCBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh-----hhhhcCCcccchHHHHHHHHHH
Confidence 358889999999999999999999999998888899999998875221 1244555666555555555443
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.33 E-value=0.00098 Score=64.43 Aligned_cols=67 Identities=21% Similarity=0.107 Sum_probs=55.4
Q ss_pred cchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 625 LNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 625 ~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
++||++++||.+.+.|+++|.+++++|.|++...+. +...+.+...+++.+|+++++ .++++|.+-.
T Consensus 19 ~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~h 91 (205)
T d1tqya2 19 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAH 91 (205)
T ss_dssp EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCccceeeeecc
Confidence 899999999999999999999999999999976553 222234456789999999998 6899998743
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.17 E-value=0.0033 Score=60.30 Aligned_cols=59 Identities=17% Similarity=0.005 Sum_probs=54.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
-+..+-+++..+|++..++.+.+ +.+|+++..+|..|..+|++|..+.||+++.|.+|.
T Consensus 110 ~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~ 169 (200)
T d1u0ma1 110 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL 169 (200)
T ss_dssp SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGG
T ss_pred cchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecccc
Confidence 46788899999999988999998 579999999999999999999999999999999875
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=95.99 E-value=0.0064 Score=56.31 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=53.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+-.+...+|++....++.++.+|+++..+|..|..+|++|....+|+++.|..+.
T Consensus 84 ~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~ 142 (166)
T d1xpma1 84 AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARY 142 (166)
T ss_dssp SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECC
T ss_pred cchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEec
Confidence 45688899999999878999999999999999999999999999999999999997554
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.95 E-value=0.0025 Score=58.10 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=52.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHH
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr 314 (814)
..+++++|+++|++++|||+|-+|.......-...+.||++++++..+ ...-+-+|++++..+.-++.++.
T Consensus 46 ~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s---~~~l~~~GN~~sasi~~~L~~~~ 116 (148)
T d1u0ma2 46 APALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFS---RATLTEYGNIASAVVLDALRRLF 116 (148)
T ss_dssp HHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHH---HHHHHHTCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHH---HHHHHhcCCCCcchHHHHHHHHH
Confidence 468899999999999999999999999999888999999999986431 11112234444444555555554
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.53 E-value=0.0065 Score=54.81 Aligned_cols=47 Identities=19% Similarity=0.206 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCccc
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNV 287 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~ 287 (814)
..+++++|+++|++++|||+|-+|.+.....-...+.||++++++..
T Consensus 47 ~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~ 93 (143)
T d1hnja2 47 AHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVV 93 (143)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC
T ss_pred hHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhh
Confidence 35889999999999999999999999998888889999999987643
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=89.90 E-value=0.094 Score=47.53 Aligned_cols=71 Identities=11% Similarity=0.150 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHH
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr 314 (814)
...++.+|+++|++.+|||.|-+|-+.....-...+.||++++++..+= ..-+-+|++++..+..++.+++
T Consensus 46 ~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~---~~l~~~GN~sSasip~~L~~~~ 116 (156)
T d1u0ua2 46 ENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTR---HVMSEYGNMSSACVHFILDQTR 116 (156)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHH---HHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhH---HHHhhcCCCCcccHHHHHHHHH
Confidence 3577889999999999999999999999988888999999998764320 0012234445555555555554
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.46 E-value=0.46 Score=42.29 Aligned_cols=82 Identities=16% Similarity=0.017 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEE-e----CCCCCcHHHHHHHHHHH-
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTT-V----NKVCASGMKAIMLASQT- 477 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~t-v----~~~caSg~~Ai~~Aa~~- 477 (814)
....++++++|+++|++++|||.+++=+. ....-..++..+|++......+ + |.+++|-..++.++.+.
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hqa-----~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~g 122 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQA-----NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 122 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCS-----CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEeccc-----cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHcC
Confidence 45567899999999999999999876322 3456778888899986544433 2 22233444566666554
Q ss_pred -HHcCCCCeEEEEeee
Q psy12877 478 -LSLGHQDVMVAGGME 492 (814)
Q Consensus 478 -I~sG~~dvvLa~G~E 492 (814)
|+.| |.++..|+-
T Consensus 123 ~i~~G--d~vll~gfG 136 (148)
T d1u6ea2 123 AAKPG--DLALLIGYG 136 (148)
T ss_dssp SSCTT--CEEEEEEEE
T ss_pred CCCCC--CEEEEEEEc
Confidence 3444 677766543
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=86.17 E-value=0.51 Score=41.67 Aligned_cols=84 Identities=11% Similarity=0.126 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHH-HHHHcCCC
Q psy12877 405 LGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLAS-QTLSLGHQ 483 (814)
Q Consensus 405 La~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa-~~I~sG~~ 483 (814)
...++++++|+++|++++|||.++.=+ .....-..++..+|++......++..-+-++..++-.+. ++++.|..
T Consensus 45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq-----~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~~ 119 (143)
T d1hnja2 45 ELAHIVDETLAANNLDRSQLDWLVPHQ-----ANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRI 119 (143)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCS
T ss_pred hhhHHHHHHHHHhhhcccccceEEecc-----CchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhCCC
Confidence 456788999999999999999986522 133467778889999865544444333323333333222 23444433
Q ss_pred ---CeEEEEeeec
Q psy12877 484 ---DVMVAGGMES 493 (814)
Q Consensus 484 ---dvvLa~G~Es 493 (814)
|.++..|+-.
T Consensus 120 ~~Gd~vll~g~G~ 132 (143)
T d1hnja2 120 KPGQLVLLEAFGG 132 (143)
T ss_dssp CTTCEEEEEEEET
T ss_pred CCCCEEEEEEEeh
Confidence 7888777654
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=86.05 E-value=0.35 Score=43.76 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=41.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCc
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKV 285 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~v 285 (814)
...++++|+++|++.+|||+|-+|-+.....-...+.||++++++
T Consensus 50 ~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l 94 (160)
T d1ee0a2 50 ENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKL 94 (160)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTT
T ss_pred HHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHH
Confidence 357788999999999999999999999998888899999999876
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=85.75 E-value=0.35 Score=43.41 Aligned_cols=47 Identities=17% Similarity=0.289 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCccc
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNV 287 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~ 287 (814)
...+.++|+++|++.+|||+|-+|-+.....-...+.||++++++..
T Consensus 45 ~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~ 91 (154)
T d1bi5a2 45 TKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNA 91 (154)
T ss_dssp HHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHH
T ss_pred HHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHH
Confidence 35788899999999999999999999999888899999999987643
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=83.04 E-value=0.6 Score=41.52 Aligned_cols=85 Identities=20% Similarity=0.117 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCC----CcHHHHHHHHHHHHH
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVC----ASGMKAIMLASQTLS 479 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~c----aSg~~Ai~~Aa~~I~ 479 (814)
....++++++|+++|++++|||.+++=+ ......+.+...+|++......++..-+ +|-..++.++.+.=+
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~Hq-----a~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~ 121 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGR 121 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhccccccccEEEeec-----cchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCC
Confidence 3456788999999999999999986532 1335677888889998655444443333 333344444444311
Q ss_pred cCCCCeEEEEeeec
Q psy12877 480 LGHQDVMVAGGMES 493 (814)
Q Consensus 480 sG~~dvvLa~G~Es 493 (814)
-..-|.+|..|+-.
T Consensus 122 ~~~Gd~vll~g~G~ 135 (149)
T d1ub7a2 122 IREGDHVLLVSFGA 135 (149)
T ss_dssp SCTTCEEEEEEEET
T ss_pred CCCCCEEEEEEEch
Confidence 22336777776643
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=80.71 E-value=0.6 Score=41.97 Aligned_cols=45 Identities=20% Similarity=0.155 Sum_probs=35.2
Q ss_pred CceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 646 KPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 646 ~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
+++++|+||+...|. |...+.+...+++++++++++ .++++|.+-
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~a 51 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNA 51 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEEC
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEee
Confidence 478999999987652 334455667899999999998 688999863
|