Psyllid ID: psy12917

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPADPEPEAEETGKMMNLQVPT
Secondary Structure (PSIPRED)
ccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccHHHHHHHHHcccccccccccccccccHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHcccccHEEEccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccccc
Coil and Loop (DISEMBL)
mekltfyalsspeKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESldpdlqilatnsfvrfanieedtpsyhrryDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFnmqesghyqspadpepeaeetgkmmnlqvpt
Flexible Loop (DISEMBL)
mekltfyalsspekldRIGEYLYqrasrdisrrRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYadvtkrnklrlagirgiqgvirktvsDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPADPEPEAEETGKMMNLQVPT
Low Complexity Region (SEG)
MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPADPEPEAEETGKMMNLQVPT
Disordered region (IsUnstruct)
*****FYAL****KLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFN******************************
Disordered Region (DISOPRED)
MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSA**************LRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNM*****************************
Disordered Region (DISEMBL)
MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES**************************
Disordered Region (DISPRO)
*EKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES**************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPADPEPEAEETGKMMNLQVPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q8IGJ0	834	Protein EFR3 homolog cmp4	yes	N/A	0.848	0.201	0.754	3e-73
Q5SPP5	816	Protein EFR3 homolog B OS	yes	N/A	0.919	0.223	0.688	7e-73
Q14156	821	Protein EFR3 homolog A OS	yes	N/A	0.989	0.238	0.653	1e-71
Q6ZQ18	817	Protein EFR3 homolog B OS	yes	N/A	0.964	0.233	0.642	2e-71
Q9Y2G0	817	Protein EFR3 homolog B OS	no	N/A	0.964	0.233	0.642	2e-71
Q8BG67	819	Protein EFR3 homolog A OS	no	N/A	0.863	0.208	0.713	4e-71
Q641A2	819	Protein EFR3 homolog A OS	N/A	N/A	0.949	0.229	0.666	2e-69
Q09263	859	Protein EFR3 homolog OS=C	yes	N/A	0.853	0.196	0.585	2e-53
Q620W3	859	Protein EFR3 homolog OS=C	N/A	N/A	0.919	0.211	0.558	1e-52
Q6FUG0	749	Protein EFR3 OS=Candida g	yes	N/A	0.393	0.104	0.333	4e-07

>sp|Q8IGJ0|EFR3_DROME Protein EFR3 homolog cmp44E OS=Drosophila melanogaster GN=stmA PE=2 SV=3

 Score =  274 bits (700), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 154/171 (90%), Gaps = 3/171 (1%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQT-LNL 59
           MEKLTFY+LSSP+KLDRIGEYLYQ+A++DI+R+R     IAMEAMD LL ACH+QT LNL
Sbjct: 62  MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKRYKLAEIAMEAMDLLLQACHAQTTLNL 121

Query: 60  FVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNY 119
           FVESFL++VQKLLE  +P+L+I+ATNSFV+FANI EDTPSYHRRYDFF+SKFS++CHS+ 
Sbjct: 122 FVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSMCHSDA 181

Query: 120 ADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ 170
           A +  R+ LRLAGI+G+QGVIRKTVSDDLVENIWE+ HMEKI+PSLLFNMQ
Sbjct: 182 ASM--RDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVPSLLFNMQ 230

An essential gene required for embryogenesis; required for cell viability.
Drosophila melanogaster (taxid: 7227)

>sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=efr3b PE=3 SV=2

 Score =  273 bits (697), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 126/183 (68%), Positives = 151/183 (82%), Gaps = 1/183 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFYALS+PEKLDRIG YL +R SRD++R R GYV IAMEA+DQLL ACH Q++NLF
Sbjct: 36  MEKLTFYALSAPEKLDRIGAYLSERLSRDVARHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+V+KLLE+  P+LQIL TNSFV+FANIEEDTPSYHR YDFFVS+FS +CHS Y 
Sbjct: 96  VESFLKMVRKLLEADKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSGYE 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R K+R+AGI+G+QGV+RKTV+D+L  NIW+  HM+KI+PSLLFN+Q SG       
Sbjct: 156 DPDIRTKIRMAGIKGLQGVVRKTVNDELQANIWDPQHMDKIVPSLLFNLQ-SGEGTESRS 214

Query: 181 PEP 183
           P P
Sbjct: 215 PSP 217

Danio rerio (taxid: 7955)

>sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A OS=Homo sapiens GN=EFR3A PE=1 SV=2

 Score =  269 bits (687), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 154/196 (78%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R+GYV+IAMEA+DQLL ACHSQ++  F
Sbjct: 37  MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS ++
Sbjct: 97  VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct: 157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRIG 216

Query: 181 PEPEAEETGKMMNLQV 196
           P      T K  N  V
Sbjct: 217 PPSSPSATDKEENPAV 232

Homo sapiens (taxid: 9606)

>sp|Q6ZQ18|EFR3B_MOUSE Protein EFR3 homolog B OS=Mus musculus GN=Efr3b PE=1 SV=2

 Score =  268 bits (684), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/196 (64%), Positives = 157/196 (80%), Gaps = 5/196 (2%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFYALS+PEKLDRIG YL +R  RD+ R R GYV IAMEA+DQLL ACH Q++NLF
Sbjct: 36  MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+V KLLES  P+LQIL TNSFV+FANIEEDTPSYHR YDFFVS+FS +CHS++ 
Sbjct: 96  VESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSSHD 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ--ESGHYQSP 178
           D+  + K+R++GI+G+QGV+RKTV+D+L  NIW+  HM+KI+PSLLFN+Q  E    +SP
Sbjct: 156 DLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDKIVPSLLFNLQHVEEAESRSP 215

Query: 179 AD---PEPEAEETGKM 191
           +    PE E E   ++
Sbjct: 216 SPLQAPEKEKENPAEL 231

Mus musculus (taxid: 10090)

>sp|Q9Y2G0|EFR3B_HUMAN Protein EFR3 homolog B OS=Homo sapiens GN=EFR3B PE=1 SV=2

 Score =  268 bits (684), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/196 (64%), Positives = 157/196 (80%), Gaps = 5/196 (2%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFYALS+PEKLDRIG YL +R  RD+ R R GYV IAMEA+DQLL ACH Q++NLF
Sbjct: 36  MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+V KLLES  P+LQIL TNSFV+FANIEEDTPSYHR YDFFVS+FS +CHS++ 
Sbjct: 96  VESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSSHD 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ--ESGHYQSP 178
           D+  + K+R++GI+G+QGV+RKTV+D+L  NIW+  HM+KI+PSLLFN+Q  E    +SP
Sbjct: 156 DLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDKIVPSLLFNLQHVEEAESRSP 215

Query: 179 AD---PEPEAEETGKM 191
           +    PE E E   ++
Sbjct: 216 SPLQAPEKEKESPAEL 231

Homo sapiens (taxid: 9606)

>sp|Q8BG67|EFR3A_MOUSE Protein EFR3 homolog A OS=Mus musculus GN=Efr3a PE=1 SV=1

 Score =  267 bits (682), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 122/171 (71%), Positives = 148/171 (86%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R+GYV+IAMEA+DQLL ACHSQ++  F
Sbjct: 37  MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS ++
Sbjct: 97  VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE 171
           D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+
Sbjct: 157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQK 207

Mus musculus (taxid: 10090)

>sp|Q641A2|EFR3A_XENLA Protein EFR3 homolog A OS=Xenopus laevis GN=efr3a PE=2 SV=1

 Score =  261 bits (667), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 126/189 (66%), Positives = 149/189 (78%), Gaps = 1/189 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R G V IAMEA+DQLL ACHSQ++  F
Sbjct: 37  MEKLTFYAVSAPEKLDRIGAYLAERLSRDVMRHRYGNVFIAMEALDQLLMACHSQSIKPF 96

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFL +V KLLES +P LQI  TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS + 
Sbjct: 97  VESFLHMVAKLLESGEPKLQIYGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHD 156

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct: 157 DPEVRKEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEDTDSRTG 216

Query: 181 PEPEAEETG 189
           P P +  TG
Sbjct: 217 P-PASPTTG 224

Xenopus laevis (taxid: 8355)

>sp|Q09263|EFR3_CAEEL Protein EFR3 homolog OS=Caenorhabditis elegans GN=C32D5.3 PE=3 SV=1

 Score =  208 bits (529), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/176 (58%), Positives = 135/176 (76%), Gaps = 7/176 (3%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQ-TLNL 59
           M+KLTFYA+S PEKL+RIGEYL  R  RD+SR+R   V IA+EAMDQLL ACHS  +L  
Sbjct: 35  MQKLTFYAISHPEKLERIGEYLVMRMVRDLSRQRPVQVKIAVEAMDQLLQACHSSPSLPQ 94

Query: 60  FVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSN- 118
           F E+ L++VQ+LLES +  ++ LAT+SFV F+NIEE +PSYHR+YDFF+ KFS +CH+N 
Sbjct: 95  FSENHLRMVQRLLESNNAKMEQLATDSFVTFSNIEESSPSYHRQYDFFIDKFSQMCHANP 154

Query: 119 ---YADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE 171
              Y D  +    R AG+RG++GV+ K+V+DDL  NIWE  HM+KI+PS+LFN+QE
Sbjct: 155 QAAYGDDFRL--ARCAGLRGLRGVVWKSVTDDLHPNIWEQQHMDKIVPSILFNLQE 208

Caenorhabditis elegans (taxid: 6239)

>sp|Q620W3|EFR3_CAEBR Protein EFR3 homolog OS=Caenorhabditis briggsae GN=CBG02625 PE=3 SV=1

 Score =  206 bits (523), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/188 (55%), Positives = 142/188 (75%), Gaps = 6/188 (3%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQ-TLNL 59
           M+KLTFYA+S PEKL+RIGEYL  R  RD++R+R   V IA+EAMDQLL ACHS  +L  
Sbjct: 35  MQKLTFYAISHPEKLERIGEYLVMRMVRDLNRQRPVQVKIAVEAMDQLLQACHSSPSLPQ 94

Query: 60  FVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSN- 118
           F E+ L++VQ+LLES +  ++ LAT+SFV F+NIEE +PSYHR+YDFF+ KFS +CH+N 
Sbjct: 95  FSENHLRMVQRLLESNNAKMEQLATDSFVTFSNIEESSPSYHRQYDFFIDKFSQMCHANP 154

Query: 119 YADVTKRNKL-RLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE---SGH 174
            A   +  +L R AG+RG++GV+ K+V+DDL  NIWE  HM+KI+PS+LFN+QE   +G 
Sbjct: 155 QAAYGEDFRLARCAGLRGLRGVVWKSVTDDLHPNIWEQQHMDKIVPSILFNLQEPDDNGG 214

Query: 175 YQSPADPE 182
           + S   P+
Sbjct: 215 FSSSHIPK 222

Caenorhabditis briggsae (taxid: 6238)

>sp|Q6FUG0|EFR3_CANGA Protein EFR3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=EFR3 PE=3 SV=1

 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)

Query: 4   LTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVES 63
           L +Y  S   KL+++  YL +R + D+SRRR G V + +E M +++  C  + LN+FV+ 
Sbjct: 37  LIYYVNSRSSKLEKVSNYLIKRTNTDLSRRRVGNVCVTLELMAKIVDHCK-ENLNVFVKE 95

Query: 64  FLKIVQKLL--ESLDPDLQIL 82
           FL ++  +L   S++ D+ ++
Sbjct: 96  FLTLMNMVLTNNSINNDVTVI 116

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
332020343	836	Protein EFR3-like protein cmp44E [Acromy	0.929	0.220	0.783	1e-81
345494907	798	PREDICTED: protein EFR3 homolog cmp44E-l	0.944	0.234	0.776	2e-81
156555215	823	PREDICTED: protein EFR3 homolog cmp44E-l	0.944	0.227	0.776	2e-81
322790300	817	hypothetical protein SINV_16156 [Solenop	0.929	0.225	0.778	6e-81
340728865	823	PREDICTED: protein EFR3 homolog cmp44E-l	0.929	0.223	0.767	8e-81
350420191	823	PREDICTED: protein EFR3 homolog cmp44E-l	0.929	0.223	0.767	8e-81
340728867	798	PREDICTED: protein EFR3 homolog cmp44E-l	0.929	0.230	0.767	8e-81
307197018	795	Protein EFR3-like protein cmp44E [Harpeg	0.944	0.235	0.765	1e-80
380011363	794	PREDICTED: LOW QUALITY PROTEIN: protein	0.904	0.225	0.788	2e-80
110771563	795	PREDICTED: protein EFR3 homolog cmp44E i	0.868	0.216	0.808	3e-80

>gi|332020343|gb|EGI60765.1| Protein EFR3-like protein cmp44E [Acromyrmex echinatior]

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/185 (78%), Positives = 163/185 (88%), Gaps = 1/185 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 75  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 134

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+VQKLLES DP LQILAT SFVRFANIEEDTPSYH RYDFFVSK+SA+CHSN  
Sbjct: 135 VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSAMCHSNND 194

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D T R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S  Y    D
Sbjct: 195 DPTTRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS-RYADKED 253

Query: 181 PEPEA 185
             P++
Sbjct: 254 TTPDS 258

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494907|ref|XP_003427397.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Nasonia vitripennis]

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/188 (77%), Positives = 165/188 (87%), Gaps = 1/188 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKL FY+LSSPEKLDRIGEYL+QRASRDISRRRNG+VVIAMEAMDQLLAACH+QTLNLF
Sbjct: 36  MEKLMFYSLSSPEKLDRIGEYLFQRASRDISRRRNGFVVIAMEAMDQLLAACHAQTLNLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+VQKLLES DP LQILAT SFVRFANIEEDTPSYH RYDFFVSK+S++CHSN  
Sbjct: 96  VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSSMCHSNND 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHY-QSPA 179
           D T R ++RLAGI+G+QGV+RKTVSDDLVENIW   HM+KI+PSLL+NMQ + +  +  A
Sbjct: 156 DSTVRKQIRLAGIQGLQGVVRKTVSDDLVENIWNMVHMDKIVPSLLYNMQNARYSNKENA 215

Query: 180 DPEPEAEE 187
            PE   EE
Sbjct: 216 TPESPTEE 223

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555215|ref|XP_001599882.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 1 [Nasonia vitripennis]

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/188 (77%), Positives = 165/188 (87%), Gaps = 1/188 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKL FY+LSSPEKLDRIGEYL+QRASRDISRRRNG+VVIAMEAMDQLLAACH+QTLNLF
Sbjct: 61  MEKLMFYSLSSPEKLDRIGEYLFQRASRDISRRRNGFVVIAMEAMDQLLAACHAQTLNLF 120

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+VQKLLES DP LQILAT SFVRFANIEEDTPSYH RYDFFVSK+S++CHSN  
Sbjct: 121 VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSSMCHSNND 180

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHY-QSPA 179
           D T R ++RLAGI+G+QGV+RKTVSDDLVENIW   HM+KI+PSLL+NMQ + +  +  A
Sbjct: 181 DSTVRKQIRLAGIQGLQGVVRKTVSDDLVENIWNMVHMDKIVPSLLYNMQNARYSNKENA 240

Query: 180 DPEPEAEE 187
            PE   EE
Sbjct: 241 TPESPTEE 248

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790300|gb|EFZ15299.1| hypothetical protein SINV_16156 [Solenopsis invicta]

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 144/185 (77%), Positives = 163/185 (88%), Gaps = 1/185 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 34  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 93

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK+VQKLLES DP LQILAT SFVRFANIEEDTPSYH RYDFFVSK+SA+CHS+  
Sbjct: 94  VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSAMCHSSND 153

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D T R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S  Y    D
Sbjct: 154 DPTTRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS-RYADKED 212

Query: 181 PEPEA 185
             P++
Sbjct: 213 ATPDS 217

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728865|ref|XP_003402733.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 1 [Bombus terrestris]

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 142/185 (76%), Positives = 164/185 (88%), Gaps = 1/185 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 61  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 120

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK++QKLLES DP LQILAT SFVRFANIE+DTPSYH RYDFFVSK+SA+CHSN+ 
Sbjct: 121 VESFLKMIQKLLESTDPQLQILATQSFVRFANIEQDTPSYHTRYDFFVSKYSAMCHSNHN 180

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S  Y +  D
Sbjct: 181 DHAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS-RYSNKED 239

Query: 181 PEPEA 185
             P++
Sbjct: 240 ATPDS 244

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420191|ref|XP_003492429.1| PREDICTED: protein EFR3 homolog cmp44E-like [Bombus impatiens]

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 142/185 (76%), Positives = 164/185 (88%), Gaps = 1/185 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 61  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 120

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK++QKLLES DP LQILAT SFVRFANIE+DTPSYH RYDFFVSK+SA+CHSN+ 
Sbjct: 121 VESFLKMIQKLLESTDPQLQILATQSFVRFANIEQDTPSYHTRYDFFVSKYSAMCHSNHN 180

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S  Y +  D
Sbjct: 181 DHAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS-RYSNKED 239

Query: 181 PEPEA 185
             P++
Sbjct: 240 ATPDS 244

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728867|ref|XP_003402734.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Bombus terrestris]

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 142/185 (76%), Positives = 164/185 (88%), Gaps = 1/185 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 36  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK++QKLLES DP LQILAT SFVRFANIE+DTPSYH RYDFFVSK+SA+CHSN+ 
Sbjct: 96  VESFLKMIQKLLESTDPQLQILATQSFVRFANIEQDTPSYHTRYDFFVSKYSAMCHSNHN 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S  Y +  D
Sbjct: 156 DHAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS-RYSNKED 214

Query: 181 PEPEA 185
             P++
Sbjct: 215 ATPDS 219

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197018|gb|EFN78390.1| Protein EFR3-like protein cmp44E [Harpegnathos saltator]

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/188 (76%), Positives = 164/188 (87%), Gaps = 1/188 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 33  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 92

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           +ESFLK+VQKLLES DP LQILAT SFVRFANIEEDTPSYH RYDFFVSK+SA+CHSN  
Sbjct: 93  IESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSAMCHSNND 152

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHY-QSPA 179
           D   R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S +  +  A
Sbjct: 153 DPAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNSRYADKEQA 212

Query: 180 DPEPEAEE 187
            P+   EE
Sbjct: 213 TPDSPTEE 220

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011363|ref|XP_003689777.1| PREDICTED: LOW QUALITY PROTEIN: protein EFR3 homolog cmp44E-like [Apis florea]

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 142/180 (78%), Positives = 161/180 (89%), Gaps = 1/180 (0%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 36  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK++QKLLES DP LQILAT SFVRFANIE+DTPSYH RYDFFVSK+SA+CHSN+ 
Sbjct: 96  VESFLKMIQKLLESTDPQLQILATQSFVRFANIEQDTPSYHTRYDFFVSKYSAMCHSNHN 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
           D   R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S  Y S  D
Sbjct: 156 DPAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS-RYSSKED 214

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110771563|ref|XP_001120727.1| PREDICTED: protein EFR3 homolog cmp44E isoform 1 [Apis mellifera]

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 139/172 (80%), Positives = 158/172 (91%)

Query: 1   MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
           MEKLTFY+LSSPEKLDRIGEYL+QRASRDI RRRNG+VVIAMEAMDQLL ACH+QTLNLF
Sbjct: 36  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 95

Query: 61  VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
           VESFLK++QKLLES DP LQILAT SFVRFANIE+DTPSYH RYDFFVSK+SA+CHSN+ 
Sbjct: 96  VESFLKMIQKLLESTDPQLQILATQSFVRFANIEQDTPSYHTRYDFFVSKYSAMCHSNHN 155

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES 172
           D   R ++RLAGI+G+QGV+RKT+SDDLVENIWE  HM+KI+PSLL+NMQ S
Sbjct: 156 DPAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDKIVPSLLYNMQNS 207

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
FB|FBgn0086784	834	stmA "stambha A" [Drosophila m	0.848	0.201	0.754	1.2e-65
UNIPROTKB|E2RCW6	821	EFR3A "Uncharacterized protein	0.974	0.235	0.663	2e-65
UNIPROTKB|Q14156	821	EFR3A "Protein EFR3 homolog A"	0.974	0.235	0.658	1.8e-64
MGI|MGI:2444851	817	Efr3b "EFR3 homolog B (S. cere	0.964	0.233	0.642	2.9e-64
MGI|MGI:1923990	819	Efr3a "EFR3 homolog A (S. cere	0.974	0.235	0.652	7.6e-64
RGD|1305976	819	Efr3a "EFR3 homolog A (S. cere	0.974	0.235	0.652	7.6e-64
ZFIN|ZDB-GENE-040426-1681	687	efr3a "EFR3 homolog A (S. cere	0.924	0.266	0.661	7.6e-64
UNIPROTKB|E1BRM7	823	EFR3A "Uncharacterized protein	0.954	0.229	0.657	1.8e-62
WB|WBGene00016311	859	C32D5.3 [Caenorhabditis elegan	0.853	0.196	0.585	1.6e-48
UNIPROTKB|F1RRT6	212	F1RRT6 "Uncharacterized protei	0.767	0.716	0.638	2.3e-48

FB|FBgn0086784 stmA "stambha A" [Drosophila melanogaster (taxid:7227)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 129/171 (75%), Positives = 154/171 (90%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQT-LNL 59
             MEKLTFY+LSSP+KLDRIGEYLYQ+A++DI+R+R     IAMEAMD LL ACH+QT LNL
Sbjct:    62 MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKRYKLAEIAMEAMDLLLQACHAQTTLNL 121

Query:    60 FVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNY 119
             FVESFL++VQKLLE  +P+L+I+ATNSFV+FANI EDTPSYHRRYDFF+SKFS++CHS+ 
Sbjct:   122 FVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSMCHSDA 181

Query:   120 ADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ 170
             A +  R+ LRLAGI+G+QGVIRKTVSDDLVENIWE+ HMEKI+PSLLFNMQ
Sbjct:   182 ASM--RDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVPSLLFNMQ 230

GO:0005886 "plasma membrane" evidence=NAS

GO:0000910 "cytokinesis" evidence=IMP

GO:0007602 "phototransduction" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0016079 "synaptic vesicle exocytosis" evidence=IMP

GO:0048488 "synaptic vesicle endocytosis" evidence=IDA;IMP

GO:0045202 "synapse" evidence=IDA

GO:0030100 "regulation of endocytosis" evidence=IMP

UNIPROTKB|E2RCW6 EFR3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 128/193 (66%), Positives = 154/193 (79%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R+GYV+IAMEA+DQLL ACHSQ++  F
Sbjct:    37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS ++
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
             D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRTG 216

Query:   181 PEPEAEETGKMMN 193
             P P    T K  N
Sbjct:   217 PPPSPSATDKEEN 229

GO:0005886 "plasma membrane" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q14156 EFR3A "Protein EFR3 homolog A" [Homo sapiens (taxid:9606)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 127/193 (65%), Positives = 153/193 (79%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R+GYV+IAMEA+DQLL ACHSQ++  F
Sbjct:    37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS ++
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
             D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRIG 216

Query:   181 PEPEAEETGKMMN 193
             P      T K  N
Sbjct:   217 PPSSPSATDKEEN 229

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

MGI|MGI:2444851 Efr3b "EFR3 homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 126/196 (64%), Positives = 157/196 (80%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYALS+PEKLDRIG YL +R  RD+ R R GYV IAMEA+DQLL ACH Q++NLF
Sbjct:    36 MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFLK+V KLLES  P+LQIL TNSFV+FANIEEDTPSYHR YDFFVS+FS +CHS++ 
Sbjct:    96 VESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSSHD 155

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ--ESGHYQSP 178
             D+  + K+R++GI+G+QGV+RKTV+D+L  NIW+  HM+KI+PSLLFN+Q  E    +SP
Sbjct:   156 DLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDKIVPSLLFNLQHVEEAESRSP 215

Query:   179 AD---PEPEAEETGKM 191
             +    PE E E   ++
Sbjct:   216 SPLQAPEKEKENPAEL 231

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1923990 Efr3a "EFR3 homolog A (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 126/193 (65%), Positives = 152/193 (78%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R+GYV+IAMEA+DQLL ACHSQ++  F
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS ++
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
             D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRLG 216

Query:   181 PEPEAEETGKMMN 193
             P        K  N
Sbjct:   217 PPSSPSAADKEEN 229

GO:0001533 "cornified envelope" evidence=ISO

GO:0005622 "intracellular" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

RGD|1305976 Efr3a "EFR3 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 126/193 (65%), Positives = 152/193 (78%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R+GYV+IAMEA+DQLL ACHSQ++  F
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS ++
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
             D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRLG 216

Query:   181 PEPEAEETGKMMN 193
             P        K  N
Sbjct:   217 PPSSPSAADKEEN 229

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-040426-1681 efr3a "EFR3 homolog A (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 121/183 (66%), Positives = 152/183 (83%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYA+S+PEKLDRIG YL +R +RD+ R R GYVVIAMEA+DQLL ACHSQ++  F
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLTRDVVRHRYGYVVIAMEALDQLLMACHSQSIKPF 96

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFL +V KLLES +PDLQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS + 
Sbjct:    97 VESFLHMVAKLLESREPDLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSQFSAMCHSTHE 156

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
             D   R+++R+AGI+G+QGV+RKTV+D+L   IWE  HM+K+IPS+LFNMQ++   +   +
Sbjct:   157 DPETRSRIRVAGIKGLQGVVRKTVNDELQAIIWEPQHMDKLIPSMLFNMQDNEDSERAGE 216

Query:   181 PEP 183
               P
Sbjct:   217 ENP 219

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1BRM7 EFR3A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 125/190 (65%), Positives = 151/190 (79%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLF 60
             MEKLTFYA+S+PEKLDRIG YL +R SRD+ R R GYV+IAMEA+DQLL ACHSQ++  F
Sbjct:    38 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRYGYVLIAMEALDQLLMACHSQSIKPF 97

Query:    61 VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA 120
             VESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYHRRYDFFVS+FSA+CHS   
Sbjct:    98 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCDH 157

Query:   121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESGHYQSPAD 180
             D   + ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI+PSLLFNMQ+     S   
Sbjct:   158 DPETQTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEDVDSRTG 217

Query:   181 PEPEAEETGK 190
             P P +   G+
Sbjct:   218 P-PSSPTGGE 226

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

WB|WBGene00016311 C32D5.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 513 (185.6 bits), Expect = 1.6e-48, P = 1.6e-48
 Identities = 103/176 (58%), Positives = 135/176 (76%)

Query:     1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQ-TLNL 59
             M+KLTFYA+S PEKL+RIGEYL  R  RD+SR+R   V IA+EAMDQLL ACHS  +L  
Sbjct:    35 MQKLTFYAISHPEKLERIGEYLVMRMVRDLSRQRPVQVKIAVEAMDQLLQACHSSPSLPQ 94

Query:    60 FVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSN- 118
             F E+ L++VQ+LLES +  ++ LAT+SFV F+NIEE +PSYHR+YDFF+ KFS +CH+N 
Sbjct:    95 FSENHLRMVQRLLESNNAKMEQLATDSFVTFSNIEESSPSYHRQYDFFIDKFSQMCHANP 154

Query:   119 ---YADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE 171
                Y D  +    R AG+RG++GV+ K+V+DDL  NIWE  HM+KI+PS+LFN+QE
Sbjct:   155 QAAYGDDFRL--ARCAGLRGLRGVVWKSVTDDLHPNIWEQQHMDKIVPSILFNLQE 208

GO:0000003 "reproduction" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

UNIPROTKB|F1RRT6 F1RRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 97/152 (63%), Positives = 117/152 (76%)

Query:    42 MEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYH 101
             MEA+DQLL ACHSQ++  FVESFL +V KLLES +P LQ+L TNSFV+FANIEEDTPSYH
Sbjct:     1 MEALDQLLMACHSQSIKPFVESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYH 60

Query:   102 RRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKI 161
             RRYDFFVS+FSA+CHS ++D   R ++R+AGIRGIQGV+RKTV+D+L   IWE  HM+KI
Sbjct:    61 RRYDFFVSRFSAMCHSCHSDPETRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKI 120

Query:   162 IPSLLFNMQESGHYQSPADPEPEAEETGKMMN 193
             +PSLLFNMQ+     S   P P      K  N
Sbjct:   121 VPSLLFNMQKIEEVDSRIGPPPSPSAADKEEN 152

GO:0005886 "plasma membrane" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q09263	EFR3_CAEEL	No assigned EC number	0.5852	0.8535	0.1967	yes	N/A
Q14156	EFR3A_HUMAN	No assigned EC number	0.6530	0.9898	0.2387	yes	N/A
Q5SPP5	EFR3B_DANRE	No assigned EC number	0.6885	0.9191	0.2230	yes	N/A
Q6ZQ18	EFR3B_MOUSE	No assigned EC number	0.6428	0.9646	0.2337	yes	N/A
Q8IGJ0	EFR3_DROME	No assigned EC number	0.7543	0.8484	0.2014	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
KOG1877|consensus	819		100.0
PF12755	97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	90.36
PF08064	107	UME: UME (NUC010) domain; InterPro: IPR012993 This	86.43

>KOG1877|consensus

Probab=100.00  E-value=4.8e-52  Score=402.12  Aligned_cols=171  Identities=60%  Similarity=0.977  Sum_probs=167.8

Q ss_pred             CchhhhhhhcCCchHHhhHHHHHHHHHHHHhhccCCceeeHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHH
Q psy12917          1 MEKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQ   80 (198)
Q Consensus         1 mskL~yYAss~p~KL~KVg~yLekR~~~Dl~r~r~G~V~Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~   80 (198)
                      |+||||||++||+||||||.||++|++||++|+|+|+|+|+|+||++|+.+||+| +|+||++||+||..||++++++|+
T Consensus        36 m~kL~~YAasnp~KL~KI~~yL~~R~~kdl~~~r~~~v~Iamea~~kLL~~C~eq-~n~F~ssfL~mv~~LLes~~~~~~  114 (819)
T KOG1877|consen   36 MEKLTFYAASNPSKLPKIGTYLEERCYKDLRRERFGSVKIAMEAYDKLLQACKEQ-INLFVSSFLRMVQKLLESNNDEMQ  114 (819)
T ss_pred             HHHHHHHHhhChhhhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhcCCCcee
Confidence            7899999999999999999999999999999999999999999999999999996 999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccch
Q psy12917         81 ILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEK  160 (198)
Q Consensus        81 ~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~  160 (198)
                      ++||++|++||++++|+|+|||+|++||++||+||++. ++++.+.++|.+||+||+||||+|+.|.+.+++|+.+|+|+
T Consensus       115 ilg~~sf~~F~~i~~d~~sy~~~yd~Fi~kf~~l~he~-~~~~~~~~lr~agl~gLsa~v~~tv~d~l~~ti~e~~h~d~  193 (819)
T KOG1877|consen  115 ILGTNSFVKFANIEEDGPSYHRNYDFFISKFSSLCHER-GDDDMKDCLRAAGLQGLSAVVWLTVSDHLAATIWEPQHMDK  193 (819)
T ss_pred             eehhhHHHHHHhhcccCchhhhhhHHHHHHHHHHhhcc-cchhhhhhccHhhhhhHHHHHHHHHhhhhhhhhhhhhhhcc
Confidence            99999999999999999999999999999999999998 77899999999999999999999999999999999999999


Q ss_pred             hHHHHHhhcccCC
Q psy12917        161 IIPSLLFNMQESG  173 (198)
Q Consensus       161 Ivp~iL~Nl~~~~  173 (198)
                      |||++++|++..+
T Consensus       194 ivpsl~~~l~~~e  206 (819)
T KOG1877|consen  194 IVPSLLFELQSIE  206 (819)
T ss_pred             chhhHHHhhcchh
Confidence            9999999999877

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region

Probab=90.36  E-value=0.19  Score=37.93  Aligned_cols=39  Identities=26%  Similarity=0.442  Sum_probs=30.9

Q ss_pred             HHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccCC
Q psy12917        128 LRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESG  173 (198)
Q Consensus       128 ~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~~  173 (198)
                      -|..||-||+++.-..+.+     +  ..++++|+|++|.++.++|
T Consensus         2 ~R~ggli~Laa~ai~l~~~-----~--~~~l~~Il~pVL~~~~D~d   40 (97)
T PF12755_consen    2 YRKGGLIGLAAVAIALGKD-----I--SKYLDEILPPVLKCFDDQD   40 (97)
T ss_pred             chhHHHHHHHHHHHHchHh-----H--HHHHHHHHHHHHHHcCCCc
Confidence            4889999999987653332     3  3689999999999998765

>PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 []

Probab=86.43  E-value=3.4  Score=31.41  Aligned_cols=56  Identities=16%  Similarity=0.194  Sum_probs=48.7

Q ss_pred             eeHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCc
Q psy12917         39 VIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDT   97 (198)
Q Consensus        39 ~Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~   97 (198)
                      +-++..+..|+..|+. +++-|++.++..+++.|+..  +++..+++++..|...-++.
T Consensus        33 ~~~l~si~~lI~~~~~-~i~~~~pQI~a~L~sal~~~--~l~~~al~~W~~fi~~L~~~   88 (107)
T PF08064_consen   33 KRALRSIEELIKLGGS-HISSARPQIMACLQSALEIP--ELREEALSCWNCFIKTLDEE   88 (107)
T ss_pred             HHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHhCCh--hhHHHHHHHHHHHHHHCCHH
Confidence            4678899999999998 59999999999999988875  99999999999999765554

; GO: 0004674 protein serine/threonine kinase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 3e-05
 Identities = 29/197 (14%), Positives = 57/197 (28%), Gaps = 50/197 (25%)

Query: 11  SPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQK 70
           +P +L  I E +     RD     + +                    ++  +    I++ 
Sbjct: 326 NPRRLSIIAESI-----RDGLATWDNW-------------------KHVNCDKLTTIIES 361

Query: 71  LLESLDPDLQILATNSFVRFANIEEDTP----------SYHRRYDFFVSKFSALCHSNYA 120
            L  L+P         F R +                     + D  V       H  Y+
Sbjct: 362 SLNVLEPAEY---RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD--VMVVVNKLH-KYS 415

Query: 121 DVTKRNKLRLAGIRGIQGVIRKTVSDD------LVE--NIWESTHMEKIIPSLLFN--MQ 170
            V K+ K     I  I   ++  + ++      +V+  NI ++   + +IP  L      
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 171 ESGHYQSPADPEPEAEE 187
             GH+    +       
Sbjct: 476 HIGHHLKNIEHPERMTL 492

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 7e-05
 Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 55/196 (28%)

Query: 2   EKLTFYALSSPEKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMD----QLLAA--CHSQ 55
           +    Y +S  +   ++ + L +        R    V+I  + +       +A   C S 
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLEL-------RPAKNVLI--DGVLGSGKTWVALDVCLSY 174

Query: 56  TL------NLF---------VESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSY 100
            +       +F          E+ L+++QKLL  +DP+    + +S      I       
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS---IQ 231

Query: 101 HRRYDFFVSKF--SAL------CHSNYAD---------VTKRNKLRLAGIRGIQGVIRKT 143
                   SK   + L       ++   +         +T R K        +       
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK---QVTDFLSAATTTH 288

Query: 144 VSDDLVENIWESTHME 159
           +S  L  +    T  E
Sbjct: 289 IS--LDHHSMTLTPDE 302

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
2qk2_A	242	LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2	96.01
2qk2_A	242	LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2	94.74
4fdd_A	852	Transportin-1; heat repeats, karyopherin, nuclear	93.22
1u6g_C	1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	91.48
2bpt_A	861	Importin beta-1 subunit; nuclear transport, nucleo	88.15
2qk1_A	249	Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h	87.36
1ibr_B	462	P95, importin beta-1 subunit, nuclear factor; smal	85.8
1qgr_A	876	Protein (importin beta subunit); transport recepto	85.59
2bpt_A	861	Importin beta-1 subunit; nuclear transport, nucleo	85.42
1u6g_C	1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	84.8
1ibr_B	462	P95, importin beta-1 subunit, nuclear factor; smal	84.41
1b3u_A	588	Protein (protein phosphatase PP2A); scaffold prote	83.5
1qgr_A	876	Protein (importin beta subunit); transport recepto	83.09
2qk1_A	249	Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h	80.35

>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}

Probab=96.01  E-value=0.022  Score=45.98  Aligned_cols=130  Identities=12%  Similarity=0.137  Sum_probs=88.7

Q ss_pred             HhhHHHHHHHHHHHHhhccCCceeeHHHHHHHHHHHccccchhhhHHHHHHHHHHHHh-cCChhHHHHHHHHHHHHhhhc
Q psy12917         16 DRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLE-SLDPDLQILATNSFVRFANIE   94 (198)
Q Consensus        16 ~KVg~yLekR~~~Dl~r~r~G~V~Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~-s~~~~l~~~a~~tf~~F~~~~   94 (198)
                      .|+..-+.+.....=|+.|.+    .+..+.+++..|++. ..-.-..++.++..+|. ..+...+..|+.++..++...
T Consensus        14 ~~l~~~l~~~l~s~~w~~R~~----a~~~L~~l~~~~~~~-~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l   88 (242)
T 2qk2_A           14 SKMPKDFYDKLEEKKWTLRKE----SLEVLEKLLTDHPKL-ENGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL   88 (242)
T ss_dssp             GGSCTTHHHHHTCSSHHHHHH----HHHHHHHHHHHCSSB-CCCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhhhccCCHHHHHH----HHHHHHHHHccCCCC-CCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence            445554555566556666655    567788889888763 32222678888888995 789999999999999999653


Q ss_pred             CCchhhhhchHHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhccc
Q psy12917         95 EDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE  171 (198)
Q Consensus        95 ~D~~~y~~~y~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~  171 (198)
                      .  +.+......+++........    .  ...+|.+...||.+++..+             +++.++|.++..+.+
T Consensus        89 ~--~~~~~~~~~ilp~ll~~l~d----~--~~~vr~~a~~aL~~~~~~~-------------~~~~ll~~l~~~l~~  144 (242)
T 2qk2_A           89 A--KRFSNYASACVPSLLEKFKE----K--KPNVVTALREAIDAIYAST-------------SLEAQQESIVESLSN  144 (242)
T ss_dssp             G--GGGHHHHHHHHHHHHHGGGC----C--CHHHHHHHHHHHHHHHTTS-------------CHHHHHHHHHHHTTC
T ss_pred             h--hhHHHHHHHHHHHHHHHHcC----C--CHHHHHHHHHHHHHHHHcC-------------CHHHHHHHHHHHHcC
Confidence            2  24444455677666665543    1  2458889999999887741             355677777776654

>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}

Probab=94.74  E-value=0.43  Score=38.27  Aligned_cols=134  Identities=9%  Similarity=0.112  Sum_probs=85.5

Q ss_pred             chHHhhHHHHHHHHHHHHhhccCCceee---HHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12917         13 EKLDRIGEYLYQRASRDISRRRNGYVVI---AMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVR   89 (198)
Q Consensus        13 ~KL~KVg~yLekR~~~Dl~r~r~G~V~V---tl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~   89 (198)
                      ..+.+|...|.+++.+|      .|..|   ++.++..|....... +.-++..++..|-..|..++..++.-++.++..
T Consensus        52 ~~~~~i~~~L~~~l~kd------~~~~V~~~a~~~l~~la~~l~~~-~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~  124 (242)
T 2qk2_A           52 GEYGALVSALKKVITKD------SNVVLVAMAGKCLALLAKGLAKR-FSNYASACVPSLLEKFKEKKPNVVTALREAIDA  124 (242)
T ss_dssp             CCCHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            45678888888877544      34444   455555555555542 445555555555555555777888888888888


Q ss_pred             HhhhcCCchhhhhchHHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhc
Q psy12917         90 FANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNM  169 (198)
Q Consensus        90 F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl  169 (198)
                      ++...        .++.+++.+...-..  .+    .++|...+..|..++...+.+.    . ...+++.|+|.++..+
T Consensus       125 ~~~~~--------~~~~ll~~l~~~l~~--~~----~~vr~~~l~~l~~~l~~~~~~~----~-~~~~l~~l~p~l~~~l  185 (242)
T 2qk2_A          125 IYAST--------SLEAQQESIVESLSN--KN----PSVKSETALFIARALTRTQPTA----L-NKKLLKLLTTSLVKTL  185 (242)
T ss_dssp             HHTTS--------CHHHHHHHHHHHTTC--SC----HHHHHHHHHHHHHHHTTCCGGG----C-CHHHHHHHHHHHHHHH
T ss_pred             HHHcC--------CHHHHHHHHHHHHcC--CC----hHHHHHHHHHHHHHHHHcCCCC----c-cHHHHHHHHHHHHHHh
Confidence            87532        256677777665442  22    3578888888888776532221    1 1247789999999999


Q ss_pred             ccC
Q psy12917        170 QES  172 (198)
Q Consensus       170 ~~~  172 (198)
                      +++
T Consensus       186 ~D~  188 (242)
T 2qk2_A          186 NEP  188 (242)
T ss_dssp             TSS
T ss_pred             cCC
Confidence            754

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*

Probab=93.22  E-value=0.17  Score=48.03  Aligned_cols=138  Identities=8%  Similarity=0.138  Sum_probs=94.8

Q ss_pred             HHhhHHHHHHHHHHHHhhccCCceeeHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhc
Q psy12917         15 LDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIE   94 (198)
Q Consensus        15 L~KVg~yLekR~~~Dl~r~r~G~V~Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~   94 (198)
                      ++.+-.+|.+.+..+-|+.|.    -++.++..+.+.|.++ +.-+...++..+-.+|...++.++..++.++..|+..-
T Consensus       357 ~~~l~~~l~~~l~~~~~~~R~----aa~~alg~i~~~~~~~-~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~  431 (852)
T 4fdd_A          357 LPHILPLLKELLFHHEWVVKE----SGILVLGAIAEGCMQG-MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWV  431 (852)
T ss_dssp             HHHHHHHHHHHHTCSSHHHHH----HHHHHHHHTTTTTHHH-HGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHhcCCCHHHHH----HHHHHHHHHHhcchHH-HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            466777777777655555554    3666778888888874 66677888888888888889999999999999988643


Q ss_pred             CCchhhhhchHHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhccc
Q psy12917         95 EDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE  171 (198)
Q Consensus        95 ~D~~~y~~~y~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~  171 (198)
                      ... .....+..+++.+...-...  +    .+.|.+...||..++...+.+     +  ...++.|+|.++.-+..
T Consensus       432 ~~~-~~~~~~~~ll~~L~~~L~d~--~----~~vr~~a~~aL~~l~~~~~~~-----l--~~~l~~ll~~L~~~l~~  494 (852)
T 4fdd_A          432 VSQ-PPDTYLKPLMTELLKRILDS--N----KRVQEAACSAFATLEEEACTE-----L--VPYLAYILDTLVFAFSK  494 (852)
T ss_dssp             HHS-CTTTTHHHHHHHHHHHHTCS--S----HHHHHHHHHHHHHHHHHHGGG-----G--GGGHHHHHHHHHHHHHH
T ss_pred             ccc-hHHHHHHHHHHHHHHHHhCC--C----HHHHHHHHHHHHHHHHHhhHh-----h--HhHHHHHHHHHHHHHHH
Confidence            211 12223456777766655431  1    357888899998888753322     2  24677888887777754

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A

Probab=91.48  E-value=0.54  Score=46.47  Aligned_cols=120  Identities=10%  Similarity=0.100  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhc
Q psy12917         41 AMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLD--PDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSN  118 (198)
Q Consensus        41 tl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~--~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~  118 (198)
                      ++.++..++..|+.. +.=+...++..+..+|...+  ..++..++..|..++...... .+..-++.+++.+......+
T Consensus       454 ~~~~L~~l~~~~~~~-l~~~l~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~~~~~-~~~~~l~~llp~L~~~l~d~  531 (1230)
T 1u6g_C          454 CFNMLTELVNVLPGA-LTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQ-VFHPHVQALVPPVVACVGDP  531 (1230)
T ss_dssp             HHHHHHHHHHHSTTT-TGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGG-GGHHHHTTTHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHchhh-hHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHhCCHH-HHHhHHHHHHHHHHHHHccc
Confidence            667788899999875 76677888888888887654  378888888888877533222 23333345555555433321


Q ss_pred             CCchHHHHHHHHHHhhhhhhhhhcccchhhhhhccc---ccccchhHHHHHhhccc
Q psy12917        119 YADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWE---STHMEKIIPSLLFNMQE  171 (198)
Q Consensus       119 ~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~---~~~~d~Ivp~iL~Nl~~  171 (198)
                            ..++|..++.++..++...+...   ..|.   ...++.|+|.++..+..
T Consensus       532 ------~~~v~~~al~~l~~l~~~~~~~~---~~~~~~~~~~~~~ll~~ll~~l~~  578 (1230)
T 1u6g_C          532 ------FYKITSEALLVTQQLVKVIRPLD---QPSSFDATPYIKDLFTCTIKRLKA  578 (1230)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHCCSS---SCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             ------chHHHHHHHHHHHHHHHHhcCcc---cccccchHHHHHHHHHHHHHHHhc
Confidence                  13567788889988886533300   0010   13578899999988854

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A

Probab=88.15  E-value=4.2  Score=37.63  Aligned_cols=117  Identities=9%  Similarity=0.131  Sum_probs=78.4

Q ss_pred             eHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhc
Q psy12917         40 IAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDP-DLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSN  118 (198)
Q Consensus        40 Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~-~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~  118 (198)
                      -.++.+..++..+..+ +.-+...++..+..++++.+. .++..++..+..++....+  .+..-+..+++.....-.. 
T Consensus       575 ~~~~~l~~l~~~~~~~-~~~~~~~l~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~--~~~~~l~~i~~~l~~~l~~-  650 (861)
T 2bpt_A          575 NILTVLAAVIRKSPSS-VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGK--GFEKYLETFSPYLLKALNQ-  650 (861)
T ss_dssp             HHHHHHHHHHHHCGGG-TGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGG--GGHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhcc-
Confidence            4667778888888874 777788888888888887666 7777777777666654322  3344455677666665532 


Q ss_pred             CCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccC
Q psy12917        119 YADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES  172 (198)
Q Consensus       119 ~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~  172 (198)
                       .+.    .+|..++.++..++...+++     .  ...++.|+|.++.++.++
T Consensus       651 -~~~----~vr~~a~~~l~~l~~~~~~~-----~--~~~~~~l~~~l~~~l~~~  692 (861)
T 2bpt_A          651 -VDS----PVSITAVGFIADISNSLEED-----F--RRYSDAMMNVLAQMISNP  692 (861)
T ss_dssp             -TTS----HHHHHHHHHHHHHHHHTGGG-----G--HHHHHHHHHHHHHHHHCT
T ss_pred             -ccH----HHHHHHHHHHHHHHHHhchh-----c--cchHHHHHHHHHHHhCCc
Confidence             222    26777888888777754321     2  146788999999998864

>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}

Probab=87.36  E-value=6.1  Score=32.39  Aligned_cols=119  Identities=6%  Similarity=0.166  Sum_probs=73.0

Q ss_pred             eHHHHHHHHHHHcc-ccchh-hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhh
Q psy12917         40 IAMEAMDQLLAACH-SQTLN-LFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHS  117 (198)
Q Consensus        40 Vtl~I~~~Ll~~C~-~~~l~-LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~  117 (198)
                      .++.++.+|....+ . .+. -|+..++..|-..+..+.+.++.-+..+...|+...... .-+...+.+++.....-..
T Consensus        80 ~A~~al~~la~~l~~~-~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~-~~~~~l~~ll~~l~~~l~~  157 (249)
T 2qk1_A           80 LAAQSVELICDKLKTP-GFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPL-ASSGRNEDMLKDILEHMKH  157 (249)
T ss_dssp             HHHHHHHHHHHHHCTT-TSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTT-CTTCTTHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcccc-cccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcccc-ccCCcHHHHHHHHHHHHcC
Confidence            45556666665554 3 244 555555555444445566888887778888888754322 1111255666666555433


Q ss_pred             cCCchHHHHHHHHHHhhhhhhhhhcccc--hhhhhhccccccc-chhHHHHHhhcccC
Q psy12917        118 NYADVTKRNKLRLAGIRGIQGVIRKTVS--DDLVENIWESTHM-EKIIPSLLFNMQES  172 (198)
Q Consensus       118 ~~~d~~~~~r~R~aGL~aL~~vv~~~~~--d~L~~~~~~~~~~-d~Ivp~iL~Nl~~~  172 (198)
                      .  +    -.+|...|..|..++.....  ..+      ..++ +.|+|.+...|+++
T Consensus       158 k--~----~~vk~~al~~l~~~~~~~~~~~~~l------~~~l~~~iip~l~~~l~D~  203 (249)
T 2qk1_A          158 K--T----PQIRMECTQLFNASMKEEKDGYSTL------QRYLKDEVVPIVIQIVNDT  203 (249)
T ss_dssp             S--S----HHHHHHHHHHHHHHHHHCCSCSHHH------HHHHTTTHHHHHHHHHTCS
T ss_pred             C--C----hHHHHHHHHHHHHHHHHcCCcchhH------HHHHHHHHHHHHHHHhcCC
Confidence            2  1    25888999999998875322  111      1367 89999999999765

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A

Probab=85.80  E-value=9.1  Score=32.27  Aligned_cols=117  Identities=13%  Similarity=0.218  Sum_probs=72.3

Q ss_pred             eHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHhhhcCCc-h-hhhhchHHHHHHHHhhh
Q psy12917         40 IAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESL--DPDLQILATNSFVRFANIEEDT-P-SYHRRYDFFVSKFSALC  115 (198)
Q Consensus        40 Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~--~~~l~~~a~~tf~~F~~~~~D~-~-~y~~~y~~~V~~f~~la  115 (198)
                      .++.++..|.+.+..+.+.-+...++..+..+|...  +++++..++.++..+...-.+. . .-..  +.+++...++.
T Consensus       149 ~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~--~~l~~~l~~~~  226 (462)
T 1ibr_B          149 STLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESER--HFIMQVVCEAT  226 (462)
T ss_dssp             HHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHH--HHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHH--HHHHHHHHHhc
Confidence            577888888888732236677788888888888765  7889999988887754321111 0 1011  22455555543


Q ss_pred             hhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccc-hhHHHHHhhccc
Q psy12917        116 HSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHME-KIIPSLLFNMQE  171 (198)
Q Consensus       116 ~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d-~Ivp~iL~Nl~~  171 (198)
                      ..  .+    ...|.+.+++|..++......     +  ..++. .|+|.++..+.+
T Consensus       227 ~~--~~----~~vr~~~~~~l~~l~~~~~~~-----~--~~~~~~~l~~~~~~~~~~  270 (462)
T 1ibr_B          227 QC--PD----TRVRVAALQNLVKIMSLYYQY-----M--ETYMGPALFAITIEAMKS  270 (462)
T ss_dssp             TC--SS----HHHHHHHHHHHHHHHHHCGGG-----C--TTTTTTTHHHHHHHHHHC
T ss_pred             CC--CC----HHHHHHHHHHHHHHHHHHHHH-----H--HHHHHHHHHHHHHHHHcC
Confidence            22  22    246778888888887752211     1  14666 788877765543

>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A

Probab=85.59  E-value=2.4  Score=39.32  Aligned_cols=123  Identities=10%  Similarity=0.051  Sum_probs=72.0

Q ss_pred             HHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCCchH
Q psy12917         44 AMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVT  123 (198)
Q Consensus        44 I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~d~~  123 (198)
                      ++..+...|..+.+.-+...++..+-..|...++.++..++.++..|+....+.......+..+++.+...-..   +  
T Consensus       389 ~l~~i~~~~~~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~---~--  463 (876)
T 1qgr_A          389 AFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSA---E--  463 (876)
T ss_dssp             HHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHHHTTS---C--
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHHHHHHHcC---C--
Confidence            44444445541124445566777777777778888999999999999976432100112345666666554432   1  


Q ss_pred             HHHHHHHHHhhhhhhhhhcccch------hhh-hhcccccccchhHHHHHhhcccCC
Q psy12917        124 KRNKLRLAGIRGIQGVIRKTVSD------DLV-ENIWESTHMEKIIPSLLFNMQESG  173 (198)
Q Consensus       124 ~~~r~R~aGL~aL~~vv~~~~~d------~L~-~~~~~~~~~d~Ivp~iL~Nl~~~~  173 (198)
                        .++|...+.+|..++....+.      ++. ....-..+++.|+|.++..+...+
T Consensus       464 --~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~L~~~l~~~~  518 (876)
T 1qgr_A          464 --PRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPD  518 (876)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHTTSCTTSCCCCCCCSSTTTHHHHHHHHHHHTTSCS
T ss_pred             --HHHHHHHHHHHHHHHHHhhhccccccccccccchhhhHhHHHHHHHHHHHHhCcC
Confidence              346777888888877642200      000 000012578899999999887653

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A

Probab=85.42  E-value=13  Score=34.20  Aligned_cols=119  Identities=16%  Similarity=0.213  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCC
Q psy12917         41 AMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA  120 (198)
Q Consensus        41 tl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~  120 (198)
                      ++..+..|...+..+ +.-|.+.++..+...|+..+.+++..++..+..++..-.+  .+......+++...+.......
T Consensus       618 ~~~~l~~l~~~~~~~-~~~~l~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~~l~~~l~~~l~~~~~  694 (861)
T 2bpt_A          618 VFYAISALAASLGKG-FEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEE--DFRRYSDAMMNVLAQMISNPNA  694 (861)
T ss_dssp             HHHHHHHHHHHHGGG-GHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGG--GGHHHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhch--hccchHHHHHHHHHHHhCCccc
Confidence            455667777777774 6666778888888888778888888888887777754322  3333345666665555443211


Q ss_pred             chHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccCC
Q psy12917        121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESG  173 (198)
Q Consensus       121 d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~~  173 (198)
                      +.    ..|.+.+.+|..++...+.+     .  ...++.++|.++..+....
T Consensus       695 ~~----~vr~~~~~~l~~l~~~~~~~-----~--~~~l~~~l~~l~~~~~~~~  736 (861)
T 2bpt_A          695 RR----ELKPAVLSVFGDIASNIGAD-----F--IPYLNDIMALCVAAQNTKP  736 (861)
T ss_dssp             CT----THHHHHHHHHHHHHHHHGGG-----G--HHHHHHHHHHHHHHHTCCC
T ss_pred             cH----hhhHHHHHHHHHHHHHhhhh-----H--HHHHHHHHHHHHHHHhcCC
Confidence            12    36788889998888764332     2  1357789999988877543

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A

Probab=84.80  E-value=1.9  Score=42.53  Aligned_cols=114  Identities=17%  Similarity=0.120  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCC
Q psy12917         41 AMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA  120 (198)
Q Consensus        41 tl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~  120 (198)
                      ++.++.+++..+.++ +.-+...++..+-..|...++..+..++.++..++....+. .    +..+++.+.+.......
T Consensus       154 al~~l~~~~~~~~~~-l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~-~----~~~~l~~l~~~L~~~~~  227 (1230)
T 1u6g_C          154 ALDIMADMLSRQGGL-LVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI-V----FVDLIEHLLSELSKNDS  227 (1230)
T ss_dssp             HHHHHHHHHHHTCSS-CTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC---------CTTHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHhHhH-HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHH-H----HHHHHHHHHHHhccCCc
Confidence            445555555554554 54466777777777777788889999999999888754433 2    34445544444333211


Q ss_pred             chHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccC
Q psy12917        121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES  172 (198)
Q Consensus       121 d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~  172 (198)
                           ...|...+++|..++...+..     +  ..+++.|+|.++..+.+.
T Consensus       228 -----~~~r~~a~~~l~~l~~~~~~~-----~--~~~l~~l~~~ll~~l~d~  267 (1230)
T 1u6g_C          228 -----MSTTRTYIQCIAAISRQAGHR-----I--GEYLEKIIPLVVKFCNVD  267 (1230)
T ss_dssp             -----SCSCTTHHHHHHHHHHHSSGG-----G--TTSCTTHHHHHHHHHSSC
T ss_pred             -----hhHHHHHHHHHHHHHHHhHHH-----H--HHHHHHHHHHHHHHhcCC
Confidence                 124556677877777653321     2  258889999999998753

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A

Probab=84.41  E-value=6.6  Score=33.14  Aligned_cols=115  Identities=10%  Similarity=0.074  Sum_probs=71.5

Q ss_pred             eHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcC
Q psy12917         40 IAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNY  119 (198)
Q Consensus        40 Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~  119 (198)
                      .+...+..|...+.++    ..+.++..+...|.+.+...+.-++.+|...+...... .+......+++....+...  
T Consensus       347 ~a~~~L~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~-~~~~~l~~~~~~l~~~l~d--  419 (462)
T 1ibr_B          347 AAGVCLMLLATCCEDD----IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPS-QLKPLVIQAMPTLIELMKD--  419 (462)
T ss_dssp             HHHHHHHHHHHHTTTT----HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTT-TTCTTTTTHHHHHHHGGGC--
T ss_pred             HHHHHHHHHHHhccHH----HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHhcC--
Confidence            3445555555555532    22567777777888888888888888888877532211 2223345677776666543  


Q ss_pred             CchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcc
Q psy12917        120 ADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ  170 (198)
Q Consensus       120 ~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~  170 (198)
                        ..  .++|.+...+|..++...+..     +....+++.++|.++..+.
T Consensus       420 --~~--~~Vr~~a~~~l~~~~~~~~~~-----~~~~~~l~~ll~~Ll~~L~  461 (462)
T 1ibr_B          420 --PS--VVVRDTAAWTVGRICELLPEA-----AINDVYLAPLLQCLIEGLS  461 (462)
T ss_dssp             --SC--HHHHHHHHHHHHHHHHHGGGG-----CCSTTTHHHHHHHHHCC--
T ss_pred             --CC--HHHHHHHHHHHHHHHHhcccc-----cccHHHHHHHHHHHHHHhc
Confidence              11  458889999998887753322     2123578899999987764

>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A

Probab=83.50  E-value=4.1  Score=35.66  Aligned_cols=93  Identities=13%  Similarity=0.095  Sum_probs=59.5

Q ss_pred             hHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhh
Q psy12917         60 FVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGV  139 (198)
Q Consensus        60 fA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~v  139 (198)
                      |.+.++..+..+|...+..++..++.++..++..-.+. .+   ++.+++.+..+...  .  .  ...|.+.+.++..+
T Consensus       438 ~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~-~~---~~~llp~l~~~~~~--~--~--~~~R~~a~~~l~~l  507 (588)
T 1b3u_A          438 FDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKE-WA---HATIIPKVLAMSGD--P--N--YLHRMTTLFCINVL  507 (588)
T ss_dssp             CCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHH-HH---HHHTHHHHHHTTTC--S--C--HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCch-hH---HHHHHHHHHHHhhC--C--C--HHHHHHHHHHHHHH
Confidence            44567777777787788888998999888877653322 22   45667766665432  1  1  35788888888877


Q ss_pred             hhcccchhhhhhcccccccchhHHHHHhhccc
Q psy12917        140 IRKTVSDDLVENIWESTHMEKIIPSLLFNMQE  171 (198)
Q Consensus       140 v~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~  171 (198)
                      +...+.+         ...+.++|.++..+.+
T Consensus       508 ~~~~~~~---------~~~~~~~~~l~~~l~d  530 (588)
T 1b3u_A          508 SEVCGQD---------ITTKHMLPTVLRMAGD  530 (588)
T ss_dssp             HHHHHHH---------HHHHHTHHHHHHGGGC
T ss_pred             HHhcCHH---------HHHHHHHHHHHhhCCC
Confidence            6642221         2345677777766654

>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A

Probab=83.09  E-value=12  Score=34.68  Aligned_cols=118  Identities=9%  Similarity=0.061  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcC
Q psy12917         41 AMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESL-DPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNY  119 (198)
Q Consensus        41 tl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~-~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~  119 (198)
                      ++..+..|+..+..+ +.-|...++.++...|... +++++..++.++...+..-.+  .+......+++.+.+.-....
T Consensus       628 a~~~l~~l~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~--~~~~~~~~i~~~l~~~l~~~~  704 (876)
T 1qgr_A          628 ALMAVSTLVEVLGGE-FLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQS--NIIPFCDEVMQLLLENLGNEN  704 (876)
T ss_dssp             HHHHHHHHHHHHGGG-GGGGHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHGG--GGHHHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHH--hhhhhHHHHHHHHHHHhCCcc
Confidence            556667777777764 6666778888888888765 888888888888887754321  333334566666666544321


Q ss_pred             CchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccC
Q psy12917        120 ADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES  172 (198)
Q Consensus       120 ~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~  172 (198)
                      .+.    ..|...+.++..++...+.+     .  ...+..++|.++..+...
T Consensus       705 ~~~----~~~~~~~~~l~~i~~~~g~~-----~--~~~l~~~~~~l~~~~~~~  746 (876)
T 1qgr_A          705 VHR----SVKPQILSVFGDIALAIGGE-----F--KKYLEVVLNTLQQASQAQ  746 (876)
T ss_dssp             SCG----GGHHHHHHHHHHHHHHHGGG-----G--GGGHHHHHHHHHHHHTCC
T ss_pred             ccH----HhhHHHHHHHHHHHHHhchh-----H--HHHHHHHHHHHHHHHhcc
Confidence            222    26677888888777754433     2  136778899888777543

>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}

Probab=80.35  E-value=11  Score=30.86  Aligned_cols=81  Identities=17%  Similarity=0.243  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCc-hhhhhch-HHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhh
Q psy12917         62 ESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDT-PSYHRRY-DFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGV  139 (198)
Q Consensus        62 ~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~-~~y~~~y-~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~v  139 (198)
                      ..++..+-..|++.++.++..++..+..++...... ..+...+ ..+++....+-...      ...+|.++..+|..+
T Consensus       145 ~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~------~~~VR~aA~~~l~~i  218 (249)
T 2qk1_A          145 EDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDT------QPAIRTIGFESFAIL  218 (249)
T ss_dssp             HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCS------SHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHH
Confidence            445555556667778888777777766666554332 1455666 78888888877542      244889999999998


Q ss_pred             hhcccchhh
Q psy12917        140 IRKTVSDDL  148 (198)
Q Consensus       140 v~~~~~d~L  148 (198)
                      ..-.|+..+
T Consensus       219 ~~~vG~~~~  227 (249)
T 2qk1_A          219 IKIFGMNTF  227 (249)
T ss_dssp             HHHHCSGGG
T ss_pred             HHHhCHHHH
Confidence            876555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1qbkb_	888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	90.52
d1ibrb_	458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	88.4
d1ibrb_	458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	84.97
d1u6gc_	1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	84.21
d2bpta1	861	Importin beta {Baker's yeast (Saccharomyces cerevi	84.09
d2bpta1	861	Importin beta {Baker's yeast (Saccharomyces cerevi	81.29

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Karyopherin beta2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.52  E-value=0.27  Score=44.11  Aligned_cols=137  Identities=9%  Similarity=0.178  Sum_probs=89.8

Q ss_pred             hHHhhHHHHHHHHHHHHhhccCCceeeHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhh
Q psy12917         14 KLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANI   93 (198)
Q Consensus        14 KL~KVg~yLekR~~~Dl~r~r~G~V~Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~   93 (198)
                      -++.+-.++.+.+.+.-|+.|.+    ++.++.++.+.|.+. +.-+.+.++..+-..|...++.++..+|.++..|+..
T Consensus       392 il~~~l~~l~~~l~s~~~~~rea----a~~alg~i~eg~~~~-~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~  466 (888)
T d1qbkb_         392 LLPHILPLLKELLFHHEWVVKES----GILVLGAIAEGCMQG-MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHW  466 (888)
T ss_dssp             SHHHHHHHHHHTTTSSSHHHHHH----HHHHHHHHTTTSHHH-HTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHhhccchhHHHHH----HHHHhhhhhhhHHHH-hcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence            36778888888877766666544    466778888899885 7777788888888888889999999999999888853


Q ss_pred             --cCCchhhhhchHHHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhccc
Q psy12917         94 --EEDTPSYHRRYDFFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE  171 (198)
Q Consensus        94 --~~D~~~y~~~y~~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~  171 (198)
                        ..+...|.   ..+++..-.....  .+    .++|.+...||..++...+.+     +  ...++.|++.++.-+..
T Consensus       467 ~~~~~~~~~~---~~~l~~ll~~l~d--~~----~~V~~~a~~al~~l~~~~~~~-----l--~p~~~~il~~l~~~l~~  530 (888)
T d1qbkb_         467 VVSQPPDTYL---KPLMTELLKRILD--SN----KRVQEAACSAFATLEEEACTE-----L--VPYLAYILDTLVFAFSK  530 (888)
T ss_dssp             HHSSCHHHHT---TTHHHHHHHHHSS--SC----HHHHHHHHHHHHHHHHHHTTS-----S--GGGHHHHHHHHHHHTTT
T ss_pred             hhhhhhhhhh---hhhHHHHHHHhcC--CC----HHHHHHHHHHHHHHHHHhhhh-----h--hhHHHHHHHHHHHHHhh
Confidence              22222332   3344433333322  11    356778888888877653221     1  13566667766655543

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin beta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.40  E-value=2.5  Score=32.82  Aligned_cols=112  Identities=13%  Similarity=0.073  Sum_probs=66.3

Q ss_pred             eHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcC
Q psy12917         40 IAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNY  119 (198)
Q Consensus        40 Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~  119 (198)
                      .+..++..+...+.++    +.+.++.++...|.+.+...+.-|+.+|...+..-.+. ........+++....+.+.  
T Consensus       346 ~a~~~l~~l~~~~~~~----~~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~-~~~~~l~~i~~~l~~~l~d--  418 (458)
T d1ibrb_         346 AAGVCLMLLATCCEDD----IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPS-QLKPLVIQAMPTLIELMKD--  418 (458)
T ss_dssp             HHHHHHHHHHHHTTTT----HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTT-TTCTTTTTHHHHHHHGGGC--
T ss_pred             HHHHHHHHHHHhccHh----hhhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHhCC--
Confidence            4555556666666553    23567778888888888887777777777666432221 1112234566655555442  


Q ss_pred             CchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhccc
Q psy12917        120 ADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQE  171 (198)
Q Consensus       120 ~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~  171 (198)
                        +.  .++|.+.+.+|.-++...         .+....+.++|++|..+-+
T Consensus       419 --~~--~~VR~~a~~~l~~i~~~~---------~~~~~~~~~l~~ll~~ll~  457 (458)
T d1ibrb_         419 --PS--VVVRDTAAWTVGRICELL---------PEAAINDVYLAPLLQCLIE  457 (458)
T ss_dssp             --SC--HHHHHHHHHHHHHHHHHG---------GGGCCSTTTHHHHHHHHHC
T ss_pred             --CC--HHHHHHHHHHHHHHHHHh---------hcccchhhHHHHHHHHHhC
Confidence              22  347888889988776642         2222345678888776643

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin beta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.97  E-value=0.3  Score=38.52  Aligned_cols=78  Identities=13%  Similarity=0.132  Sum_probs=59.8

Q ss_pred             chHHhhHHHHHHHHHHHHhhccCCceeeHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhh
Q psy12917         13 EKLDRIGEYLYQRASRDISRRRNGYVVIAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFAN   92 (198)
Q Consensus        13 ~KL~KVg~yLekR~~~Dl~r~r~G~V~Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~   92 (198)
                      .-++.+-.++.+.+..+=|+.|.+    ++.++..+.+.|..+.+.-|.++++..|-..|...++.+|..|+.++..++.
T Consensus       361 ~~~~~l~~~i~~~l~s~~~~~r~a----al~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~  436 (458)
T d1ibrb_         361 DIVPHVLPFIKEHIKNPDWRYRDA----AVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICE  436 (458)
T ss_dssp             THHHHHHHHHHHHTTCSSHHHHHH----HHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHhcCCCHHHHHH----HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            457788888888877666665543    4556677777786544666788898888889988999999999999998886


Q ss_pred             hc
Q psy12917         93 IE   94 (198)
Q Consensus        93 ~~   94 (198)
                      .-
T Consensus       437 ~~  438 (458)
T d1ibrb_         437 LL  438 (458)
T ss_dssp             HG
T ss_pred             Hh
Confidence            54

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HEAT repeat
domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.21  E-value=2.5  Score=38.21  Aligned_cols=115  Identities=17%  Similarity=0.101  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCC
Q psy12917         41 AMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA  120 (198)
Q Consensus        41 tl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~  120 (198)
                      .+.++..|+...... +.-+...++..+...|.+.+..++..|+.++...+....+. .+    ..+++...+.......
T Consensus       151 al~~l~~l~~~~g~~-l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~-~~----~~~~~~ll~~l~~~~~  224 (1207)
T d1u6gc_         151 ALDIMADMLSRQGGL-LVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI-VF----VDLIEHLLSELSKNDS  224 (1207)
T ss_dssp             HHHHHHHHHHHTCSS-CTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC-----C----TTHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHhhHh-hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHH-HH----HHHHHHHHHHHccCCC
Confidence            345566666666542 55455556555555556778888888888877766543332 22    2334433332222211


Q ss_pred             chHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccCC
Q psy12917        121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQESG  173 (198)
Q Consensus       121 d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~~  173 (198)
                      ..     .|...+++|.++++..+..     ..  .+++.|+|.++..+...+
T Consensus       225 ~~-----~~~~~~~~l~~l~~~~~~~-----~~--~~l~~i~~~l~~~l~~~~  265 (1207)
T d1u6gc_         225 MS-----TTRTYIQCIAAISRQAGHR-----IG--EYLEKIIPLVVKFCNVDD  265 (1207)
T ss_dssp             SC-----SCTTHHHHHHHHHHHSSGG-----GT--TSCTTHHHHHHHHHSSCC
T ss_pred             HH-----HHHHHHHHHHHHHHHcchh-----hH--HHHHHHHHHHHHHhcCcc
Confidence            11     2345678888877753322     22  588999999998887654

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin beta
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.09  E-value=11  Score=31.60  Aligned_cols=130  Identities=15%  Similarity=0.222  Sum_probs=80.2

Q ss_pred             HHHHhhccCCcee-eHHHHHHHHHHHccccchhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhcCCchhhhhchH
Q psy12917         27 SRDISRRRNGYVV-IAMEAMDQLLAACHSQTLNLFVESFLKIVQKLLESLDPDLQILATNSFVRFANIEEDTPSYHRRYD  105 (198)
Q Consensus        27 ~~Dl~r~r~G~V~-Vtl~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~  105 (198)
                      .+-+.......++ -++.++..++..++++ +.-|.+.++..+...|+..+...+..++......+..-.+  .+..-.+
T Consensus       603 ~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~-~~~~l~~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~--~~~~~~~  679 (861)
T d2bpta1         603 FRLLEKKDSAFIEDDVFYAISALAASLGKG-FEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEE--DFRRYSD  679 (861)
T ss_dssp             HHHHHSTTGGGTHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGG--GGHHHHH
T ss_pred             hhhcccCCchhHHHHHHHHHHHHHHHhhHH-HHHHHHHHhhHHHHHhCCCCHHHHHHHHHHHHHHHHHhHH--HhHhhHH
Confidence            3333344444443 5677888888888875 8888888888888888888888888888877777654322  2222234


Q ss_pred             HHHHHHHhhhhhcCCchHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcc
Q psy12917        106 FFVSKFSALCHSNYADVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQ  170 (198)
Q Consensus       106 ~~V~~f~~la~~~~~d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~  170 (198)
                      .++......-+....+.+    +|.+-+.+|..++...++.     ..  +.++.++|.+..-+.
T Consensus       680 ~i~~~L~~~l~~~~~~~~----~k~~~~~~l~~i~~~~~~~-----~~--~~l~~~~~~l~~~~~  733 (861)
T d2bpta1         680 AMMNVLAQMISNPNARRE----LKPAVLSVFGDIASNIGAD-----FI--PYLNDIMALCVAAQN  733 (861)
T ss_dssp             HHHHHHHHHHHCTTCCTT----HHHHHHHHHHHHHHHHGGG-----GH--HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCHH----HHHHHHHHHHHHHHHHHHH-----HH--HHHHHHHHHHHHHhC
Confidence            555555555544333333    4566777888777764332     11  345666665554433

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin beta
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.29  E-value=7.6  Score=32.56  Aligned_cols=115  Identities=9%  Similarity=0.121  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHccccchhhhHHHHHHHHHHHHhc-CChhHHHHHHHHHHHHhhhcCCchhhhhchHHHHHHHHhhhhhcCC
Q psy12917         42 MEAMDQLLAACHSQTLNLFVESFLKIVQKLLES-LDPDLQILATNSFVRFANIEEDTPSYHRRYDFFVSKFSALCHSNYA  120 (198)
Q Consensus        42 l~I~~~Ll~~C~~~~l~LfA~s~l~ii~~lL~s-~~~~l~~~a~~tf~~F~~~~~D~~~y~~~y~~~V~~f~~la~~~~~  120 (198)
                      ...+..++.+|+.+ ..-++..++..+-..++. .+..++..++.++..++..-..  .+..-++.+++.+.......  
T Consensus       577 ~~~l~~~~~~~~~~-~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~--~~~~~l~~i~p~l~~~l~~~--  651 (861)
T d2bpta1         577 LTVLAAVIRKSPSS-VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGK--GFEKYLETFSPYLLKALNQV--  651 (861)
T ss_dssp             HHHHHHHHHHCGGG-TGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGG--GGHHHHHHHHHHHHHHHHCT--
T ss_pred             HHHHHHHHhcchhh-HHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhHHHHHhCCC--
Confidence            34567778888875 777888888888888865 5556666677777777754322  33444556777776655432  


Q ss_pred             chHHHHHHHHHHhhhhhhhhhcccchhhhhhcccccccchhHHHHHhhcccC
Q psy12917        121 DVTKRNKLRLAGIRGIQGVIRKTVSDDLVENIWESTHMEKIIPSLLFNMQES  172 (198)
Q Consensus       121 d~~~~~r~R~aGL~aL~~vv~~~~~d~L~~~~~~~~~~d~Ivp~iL~Nl~~~  172 (198)
                      +.+    .|...+.++..++...+++     +  ...++.|++.++..+...
T Consensus       652 ~~~----v~~~a~~~l~~i~~~~~~~-----~--~~~~~~i~~~L~~~l~~~  692 (861)
T d2bpta1         652 DSP----VSITAVGFIADISNSLEED-----F--RRYSDAMMNVLAQMISNP  692 (861)
T ss_dssp             TSH----HHHHHHHHHHHHHHHTGGG-----G--HHHHHHHHHHHHHHHHCT
T ss_pred             CHH----HHHHHHHHHHHHHHHhHHH-----h--HhhHHHHHHHHHHHhCCC
Confidence            222    4455566666665542222     2  245678888888888754