Psyllid ID: psy12975

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-----
Protein Sequence
MTQLIINDDKKTSDTGDQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTESCATTEPSTTASHHEKYSPGQHDTYRHVTFEPCARKVCVTPRPRRSGTASPPLVPKQIKAIGLDRDERHFRPMHT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mtqliinddkktsdtgdqtysettepsitskepsvtttepsitskepfvtttepsitskepsvtttepsitskepsvtttepsitskepsvtttepsitskepsltttepsitskesseittevsgtttescattepsttashhekyspgqhdtyrhvtfepcarkvcvtprprrsgtaspplvpkqIKAIgldrderhfrpmht
Flexible Loop (DISEMBL)
mtqliinddkktsdtgdqtysettepsitskepsvtttepsitskepfvtttepsitskepsvtttepsitskepsvtttepsitskepsvtttepsitskepsltttepsitskesseittevsgtttescattepsttashhekyspgqhdtyrhVTFEPCARKVCVtprprrsgtaspplvpkqikaigldrderhfrpmht
Low Complexity Region (SEG)
MTQLIINDDKKTSDTGDQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSLtttepsitskesseitteVSGTTTESCATTEPSTTASHHEKYSPGQHDTYRHVTFEPCARKVCVTPRPRRSGTASPPLVPKQIKAIGLDRDERHFRPMHT
Disordered region (IsUnstruct)
**********************************************************************************************************************************************************YRHVTFEPCARKVCV************************************
Disordered Region (DISOPRED)
***LI*N******************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MTQLIINDDK********************************************************************************************************************************************QHDTYRHVTFEPCARKVCVTP**********PLVPKQIKAIGLDRDERHFRPMHT
Disordered Region (DISPRO)
*************************************************************************************************************************************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTQLIINDDKKTSDTGDQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTESCATTEPSTTASHHEKYSPGQHDTYRHVTFEPCARKVCVTPRPRRSGTASPPLVPKQIKAIGLDRDERHFRPMHT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	205	2.2.26 [Sep-21-2011]
Q9Y493	2812	Zonadhesin OS=Homo sapien	yes	N/A	0.439	0.032	0.319	1e-07
Q9QX47	2444	Protein SON OS=Mus muscul	yes	N/A	0.468	0.039	0.299	8e-05
P18583	2426	Protein SON OS=Homo sapie	no	N/A	0.263	0.022	0.381	0.0004

>sp|Q9Y493|ZAN_HUMAN Zonadhesin OS=Homo sapiens GN=ZAN PE=2 SV=4

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 75/94 (79%)

Query: 23  TTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEP 82
           T  P+I++K+P+V+  +PS+T+++P V   +P+I +++P+++T +P+I S++P++ + +P
Sbjct: 560 TENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKP 619

Query: 83  SITSKEPSVTTTEPSITSKEPSLTTTEPSITSKE 116
           +I S++P++ T +P+I S++P++ + +P+I++++
Sbjct: 620 TIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEK 653

Binds in a species-specific manner to the zona pellucida of the egg. May be involved in gamete recognition and/or signaling.
Homo sapiens (taxid: 9606)

>sp|Q9QX47|SON_MOUSE Protein SON OS=Mus musculus GN=Son PE=1 SV=2

 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 11/107 (10%)

Query: 26   PSITSKEPSVTTTEP---------SITSKEPFVTTTE-PSITSKEPSVTTTEPSITSKEP 75
            P++   EP V   EP         S++  EP V  +E P++   E ++T     ++S EP
Sbjct: 1386 PAVAVPEPLVAAPEPPTMATPELCSLSVSEPPVAVSELPALADPEHAITAVS-GVSSLEP 1444

Query: 76   SVTTTEPSITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITT 122
            SV   EP+++  +P +  +EPS+  +EP++  +EP++   E ++IT+
Sbjct: 1445 SVPILEPAVSVLQPVMIVSEPSVPVQEPTVAVSEPAVIVSEHTQITS 1491

RNA-binding protein that acts as a mRNA splicing cofactor by promoting efficient splicing of transcripts that posses weak splice sites. Specifically promotes splicing of many cell-cycle and DNA-repair transcripts that posses weak splice sites, such as TUBG1, KATNB1, TUBGCP2, AURKB, PCNT, AKT1, RAD23A, and FANCG. Probably acts by facilitating the interaction between Serine/arginine-rich proteins such as SRSF2 and the RNA polymerase II. Also binds to DNA; binds to the consensus DNA sequence: 5'-GA[GT]AN[CG][AG]CC-3' (By similarity). May also regulate the ghrelin signaling in hypothalamic neuron by acting as a negative regulator of GHSR expression.

Mus musculus (taxid: 10090)

>sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4

 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 38/55 (69%)

Query: 48   FVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKE 102
            +VT   P +++ EPSV   EP+++  +PS+  +EPS++ +E +VT +EP++T  E
Sbjct: 1402 YVTIPVPVVSALEPSVPVLEPAVSVLQPSMIVSEPSVSVQESTVTVSEPAVTVSE 1456

RNA-binding protein that acts as a mRNA splicing cofactor by promoting efficient splicing of transcripts that posses weak splice sites. Specifically promotes splicing of many cell-cycle and DNA-repair transcripts that posses weak splice sites, such as TUBG1, KATNB1, TUBGCP2, AURKB, PCNT, AKT1, RAD23A, and FANCG. Probably acts by facilitating the interaction between Serine/arginine-rich proteins such as SRSF2 and the RNA polymerase II. Also binds to DNA; binds to the consensus DNA sequence: 5'-GA[GT]AN[CG][AG]CC-3'. May indirectly repress hepatitis B virus (HBV) core promoter activity and transcription of HBV genes and production of HBV virions.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	205
425779397	1311	hypothetical protein PDIG_14760 [Penicil	0.580	0.090	0.475	2e-14
449271857	254	Splicing factor 3A subunit 2 [Columba li	0.385	0.311	0.445	6e-14
156340689	186	hypothetical protein NEMVEDRAFT_v1g2393	0.570	0.629	0.330	2e-11
198451428	1881	GA19256 [Drosophila pseudoobscura pseudo	0.546	0.059	0.362	1e-10
291224128	773	PREDICTED: predicted protein-like [Sacco	0.546	0.144	0.386	1e-10
83312446	1134	Calphotin; microtubule-associated protei	0.482	0.087	0.356	4e-10
260834147	210	hypothetical protein BRAFLDRAFT_195588 [	0.234	0.228	0.344	5e-10
340712191	3385	PREDICTED: hypothetical protein LOC10064	0.453	0.027	0.354	9e-10
156375201	93	predicted protein [Nematostella vectensi	0.429	0.946	0.363	4e-09
443699570	276	hypothetical protein CAPTEDRAFT_205950 [	0.463	0.344	0.603	8e-09

>gi|425779397|gb|EKV17461.1| hypothetical protein PDIG_14760 [Penicillium digitatum PHI26]

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 1/120 (0%)

Query: 17  DQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPS 76
           +QT + T EP  T++EP  TT EP  T++EP  TT EP  T++EP  TT EP  T++EP 
Sbjct: 7   EQTAT-TEEPPATAEEPPATTEEPPATAEEPPATTEEPPATAEEPPATTEEPPATAEEPP 65

Query: 77  VTTTEPSITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTESCATTE 136
            TT EP  T++EP  TT EP  T++EP  TT EP  T++E    T E   T  E  ATTE
Sbjct: 66  ATTEEPPATAEEPPATTEEPPATAEEPPATTEEPPATAEEPPATTEEPPATAEEPPATTE 125

Source: Penicillium digitatum PHI26

Species: Penicillium digitatum

Genus: Penicillium

Family: Trichocomaceae

Order: Eurotiales

Class: Eurotiomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|449271857|gb|EMC82053.1| Splicing factor 3A subunit 2 [Columba livia]

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 49/92 (53%)

Query: 25  EPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSI 84
           EP +T  EP VT   P +T  EP VT  EP +T   P VT  EP +T  EP VT   P +
Sbjct: 9   EPGVTDIEPGVTDMGPGVTDIEPGVTDIEPGVTDMGPGVTDIEPGVTDIEPGVTDMGPGV 68

Query: 85  TSKEPSVTTTEPSITSKEPSLTTTEPSITSKE 116
           T  EP VT  EP +T   P +T  EP +T  E
Sbjct: 69  TDIEPGVTDIEPGVTDMGPGVTDIEPGVTDIE 100

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156340689|ref|XP_001620524.1| hypothetical protein NEMVEDRAFT_v1g2393 [Nematostella vectensis] gi|156205555|gb|EDO28424.1| predicted protein [Nematostella vectensis]

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)

Query: 23  TTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEP 82
           T +PS  + + S  T +PS  + +P   T +PS  + +PS  T + S  + +PS  T +P
Sbjct: 56  TMDPSCVTMDSSCVTMDPSCVTMDPSCVTLDPSCVTMDPSCVTMDASCVTMDPSCVTMDP 115

Query: 83  SITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTE-SCATTEPST 139
           S  + +PS  T +PS  + +PS  T +PS  + ++S +T + S  T + SC T +PS 
Sbjct: 116 SCVTMDPSCVTMDPSCVTMDPSCVTMDPSCVTMDASCVTMDPSCVTMDPSCVTMDPSC 173

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|198451428|ref|XP_001358364.2| GA19256 [Drosophila pseudoobscura pseudoobscura] gi|198131485|gb|EAL27503.2| GA19256 [Drosophila pseudoobscura pseudoobscura]

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 30  SKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEP 89
           +KEP     EP + +KEP     EP   +KEP V   EP + +KEP     EP + +KEP
Sbjct: 506 AKEPQARAKEPQVAAKEPQAPAKEPQAPAKEPQVPAKEPQVHAKEPQAPAKEPQVHAKEP 565

Query: 90  SVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTES-CATTEPSTTA 141
            V   EP   SK+P L   EP   +KE+     E+     E+  A  EP   A
Sbjct: 566 QVHAKEPQAPSKQPQLHAKEPQAPAKEAQVAAKELKAPAKEAQVAAKEPVVPA 618

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291224128|ref|XP_002732059.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 59/119 (49%)

Query: 24  TEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPS 83
           TEPS T+ EPS   + P     EP V  +EPS T+ EPS   + PS  +  PS T +EPS
Sbjct: 209 TEPSATNSEPSANNSGPIANHCEPSVNNSEPSATNSEPSANNSGPSANNSGPSATNSEPS 268

Query: 84  ITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTESCATTEPSTTAS 142
             +  P     EPS+ + EPS T +EPS  + E S   +       E  A  EP  T S
Sbjct: 269 ANNSGPIANHCEPSVNNSEPSATNSEPSANNSEPSANNSGPIANHCEPSANNEPCATNS 327

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|83312446|ref|YP_422710.1| Calphotin; microtubule-associated protein 4 [Magnetospirillum magneticum AMB-1] gi|82947287|dbj|BAE52151.1| Calphotin; Microtubule-associated protein 4 [Magnetospirillum magneticum AMB-1]

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/101 (35%), Positives = 45/101 (44%)

Query: 25  EPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSI 84
           EP +   EP V   EP +   EP V   EP +   EP V   EP +   EP V   EP +
Sbjct: 632 EPLVVEDEPLVVEDEPPVAEDEPLVVEDEPPVAEDEPLVVEDEPPVVEDEPLVVEDEPPV 691

Query: 85  TSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTEVS 125
              EP V   EP +   EP +T  EP +   ES  +  E S
Sbjct: 692 AEDEPPVVEDEPPVVEDEPPVTEDEPPVAEDESPIVEEEPS 732

Source: Magnetospirillum magneticum AMB-1

Species: Magnetospirillum magneticum

Genus: Magnetospirillum

Family: Rhodospirillaceae

Order: Rhodospirillales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|260834147|ref|XP_002612073.1| hypothetical protein BRAFLDRAFT_195588 [Branchiostoma floridae] gi|229297446|gb|EEN68082.1| hypothetical protein BRAFLDRAFT_195588 [Branchiostoma floridae]

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 38/90 (42%)

Query: 24  TEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPS 83
            EP +   EP V   EP +   EP V   EP +   EP V   EP +   EP V   EP 
Sbjct: 7   AEPRVLPAEPGVLPAEPGVLPAEPGVLHAEPGVLPAEPGVLPAEPGVLPAEPGVLPAEPG 66

Query: 84  ITSKEPSVTTTEPSITSKEPSLTTTEPSIT 113
           +   EP V   EP +   EP +   EP   
Sbjct: 67  VLPAEPGVLPAEPGVLPAEPRVLPAEPGCC 96

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|340712191|ref|XP_003394647.1| PREDICTED: hypothetical protein LOC100648429 [Bombus terrestris]

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 65/93 (69%)

Query: 21   SETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTT 80
            SE T+P++T   P+VT  + ++T  +P VT  +P++T  +P+VT  +P++T  +P+VT  
Sbjct: 2944 SEGTQPAVTEGLPAVTEAQSAVTEAQPAVTEAQPAVTEAQPAVTEAQPAVTEAQPAVTEA 3003

Query: 81   EPSITSKEPSVTTTEPSITSKEPSLTTTEPSIT 113
            +P++T  + +VT  +P++T  +P++T T+P++T
Sbjct: 3004 QPAVTEAQSAVTEAQPAVTEAQPAVTETQPAVT 3036

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156375201|ref|XP_001629970.1| predicted protein [Nematostella vectensis] gi|156216982|gb|EDO37907.1| predicted protein [Nematostella vectensis]

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%)

Query: 23  TTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEP 82
           T  PS+ +  PS+ T  PS+ +  P + T  PS+ +  PS+ T  PS+ +  PS+ T  P
Sbjct: 6   TFRPSLVTFRPSLVTFRPSLVTFRPSLVTFRPSLVTFRPSLVTFRPSLVTFRPSLVTFRP 65

Query: 83  SITSKEPSVTTTEPSITSKEPSLTTTEP 110
           S+ +  PS+ T  PS+ +  PSL T  P
Sbjct: 66  SLVTFRPSLVTFRPSLVTFRPSLVTFRP 93

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|443699570|gb|ELT98986.1| hypothetical protein CAPTEDRAFT_205950 [Capitella teleta]

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 74/101 (73%), Gaps = 6/101 (5%)

Query: 23  TTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEP 82
           TTEP ITS EP ++TTEP  ++ EP  +TTEP ITS EP ++T+EP ITS EPSV+TTEP
Sbjct: 163 TTEP-ITSTEPYISTTEPITSTTEPITSTTEP-ITSTEPYISTSEP-ITSTEPSVSTTEP 219

Query: 83  SITSKEPSVTTTEPSITSKEPSLTTTEPSITSKESSEITTE 123
            ITS +P ++TTEP ITS  P  +TTEP ITS    E TTE
Sbjct: 220 -ITSTKPYISTTEP-ITSTVPYESTTEP-ITSTLLYESTTE 257

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	205
WB|WBGene00007820	667	clec-199 [Caenorhabditis elega	0.775	0.238	0.325	1.4e-16
UNIPROTKB|B6ECP2	627	GPIbA "Uncharacterized protein	0.419	0.137	0.476	1.7e-14
FB|FBgn0052644	536	Mur11Da "Mucin related 11Da" [	0.556	0.212	0.440	3.5e-14
UNIPROTKB|F5GZI5	2688	ZAN "Zonadhesin" [Homo sapiens	0.453	0.034	0.340	5.1e-14
SGD|S000005327	725	AGA1 "Anchorage subunit of a-a	0.726	0.205	0.375	5.9e-14
UNIPROTKB|F5H4B5	2623	ZAN "Zonadhesin" [Homo sapiens	0.453	0.035	0.340	4.9e-13
UNIPROTKB|F5H0T8	2720	ZAN "Zonadhesin" [Homo sapiens	0.453	0.034	0.340	5.1e-13
UNIPROTKB|Q9Y493	2812	ZAN "Zonadhesin" [Homo sapiens	0.453	0.033	0.340	5.3e-13
WB|WBGene00008203	499	clec-198 [Caenorhabditis elega	0.590	0.242	0.348	7.3e-12
UNIPROTKB|E7EUV1	2817	MUC2 "Mucin-2" [Homo sapiens (	0.892	0.064	0.306	2.1e-11

WB|WBGene00007820 clec-199 [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 55/169 (32%), Positives = 79/169 (46%)

Query:    11 KTSDTGDQTYSETTE-PSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPS 69
             +T+ T   T +ETT  P+ T+  P+ TTTE + T+  P  TTT P+ T+  P+ TTT P+
Sbjct:   343 ETTTTPTTTTTETTTTPTTTTTTPTTTTTETTTTT--PTTTTTTPTTTTTTPTTTTTTPT 400

Query:    70 ITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSLXXXXXXXXXXXXXXXXXXVSGTTT 129
              T+  P+ TTT P+ T+  P+ TTT P+ T+  P+                      TTT
Sbjct:   401 TTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTT----TTT 456

Query:   130 ESCATTEPSTTASHHEKYSPGQHDTYRHVTFEPCARKVCVTPRPRRSGT 178
                 TT P+TT S     +P    T    T +P       T  P  + T
Sbjct:   457 TPTTTTTPATTTSETTTTTP---TTTTQTTTKPTTTTTTPTTTPTTTTT 502

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|B6ECP2 GPIbA "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 195 (73.7 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 41/86 (47%), Positives = 49/86 (56%)

Query:    19 TYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVT 78
             T   + EP  T+ EP  TT EP  T+ EP  TT EP  T+ EP  TT EP  T+ EP  T
Sbjct:   358 TLELSPEPLTTTPEPLTTTPEPLTTTPEPLTTTPEPLTTTPEPLTTTPEPLTTTPEPLTT 417

Query:    79 TTEPSITSKEPSVTTTEPSITSKEPS 104
             T EP  T+ EP  TT EP  T+ EP+
Sbjct:   418 TPEPLTTTPEPLTTTPEPLTTTPEPT 443

GO:0042730 "fibrinolysis" evidence=IEA

GO:0031362 "anchored to external side of plasma membrane" evidence=IEA

GO:0007599 "hemostasis" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

FB|FBgn0052644 Mur11Da "Mucin related 11Da" [Drosophila melanogaster (taxid:7227)]

 Score = 191 (72.3 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 56/127 (44%), Positives = 78/127 (61%)

Query:    21 SETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTT 80
             S TTEP+ T+ EP+ TTTEP+ T+ EP  TTT  + T+ EP+ TTTEP+ T+ EP+ TTT
Sbjct:   301 SNTTEPTTTA-EPT-TTTEPTTTT-EP--TTTTENTTTTEPT-TTTEPTTTT-EPT-TTT 352

Query:    81 EPSITSKEPSVTTTEPSITSKEPSLXXXXXXXXXXXXXXXXXXVSG--TTTESCATTEPS 138
             E + T+ EP+ TTTEP+ T+ EP+                    +   TTT+S  +T+PS
Sbjct:   353 E-NTTTTEPT-TTTEPTTTT-EPTTTTESTTTTERVTNTDLTTTTTLLTTTKSQTSTDPS 409

Query:   139 TTASHHE 145
             TT+S  E
Sbjct:   410 TTSSTTE 416

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0031012 "extracellular matrix" evidence=ISM

GO:0042600 "chorion" evidence=IC

GO:0007304 "chorion-containing eggshell formation" evidence=IEP

UNIPROTKB|F5GZI5 ZAN "Zonadhesin" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
 Identities = 32/94 (34%), Positives = 71/94 (75%)

Query:    13 SDTG-DQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSIT 71
             S TG  +T   T  P+I++K+P+V+  +PS+T+++P V   +P+I +++P+++T +P+I 
Sbjct:   549 SSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIP 608

Query:    72 SKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSL 105
             S++P++ + +P+I S++P++ T +P+I S++P++
Sbjct:   609 SEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTI 642

GO:0016020 "membrane" evidence=IEA

SGD|S000005327 AGA1 "Anchorage subunit of a-agglutinin of a-cells" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 191 (72.3 bits), Expect = 5.9e-14, P = 5.9e-14
 Identities = 57/152 (37%), Positives = 66/152 (43%)

Query:    12 TSDTGDQTYSE--TTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPS 69
             TS     T S   TT  S TS  PS T+T PS TS     T+T  S TS   S T+T PS
Sbjct:   170 TSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPS 229

Query:    70 ITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSLXXXXXXXXXXXXXXXXXXVSGTTT 129
              TS   S+T+T  S TS   S T+T  S TS  PS                    S T+T
Sbjct:   230 STSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTST 289

Query:   130 ESCAT-TEPSTTASHHEKYSPGQHDTYRHVTF 160
              S +T T PS T+S     S     T    TF
Sbjct:   290 SSYSTSTSPSLTSSSPTLASTSPSSTSISSTF 321

GO:0050839 "cell adhesion molecule binding" evidence=ISS;IMP

GO:0000752 "agglutination involved in conjugation with cellular fusion" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0005618 "cell wall" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

GO:0019236 "response to pheromone" evidence=IEA

GO:0009277 "fungal-type cell wall" evidence=IDA

UNIPROTKB|F5H4B5 ZAN "Zonadhesin" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 32/94 (34%), Positives = 71/94 (75%)

Query:    13 SDTG-DQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSIT 71
             S TG  +T   T  P+I++K+P+V+  +PS+T+++P V   +P+I +++P+++T +P+I 
Sbjct:   549 SSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIP 608

Query:    72 SKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSL 105
             S++P++ + +P+I S++P++ T +P+I S++P++
Sbjct:   609 SEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTI 642

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F5H0T8 ZAN "Zonadhesin" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 5.1e-13, P = 5.1e-13
 Identities = 32/94 (34%), Positives = 71/94 (75%)

Query:    13 SDTG-DQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSIT 71
             S TG  +T   T  P+I++K+P+V+  +PS+T+++P V   +P+I +++P+++T +P+I 
Sbjct:   549 SSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIP 608

Query:    72 SKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSL 105
             S++P++ + +P+I S++P++ T +P+I S++P++
Sbjct:   609 SEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTI 642

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9Y493 ZAN "Zonadhesin" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 5.3e-13, P = 5.3e-13
 Identities = 32/94 (34%), Positives = 71/94 (75%)

Query:    13 SDTG-DQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSIT 71
             S TG  +T   T  P+I++K+P+V+  +PS+T+++P V   +P+I +++P+++T +P+I 
Sbjct:   549 SSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIP 608

Query:    72 SKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSL 105
             S++P++ + +P+I S++P++ T +P+I S++P++
Sbjct:   609 SEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTI 642

GO:0016021 "integral to membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=NAS

GO:0005886 "plasma membrane" evidence=NAS

GO:0007339 "binding of sperm to zona pellucida" evidence=NAS

WB|WBGene00008203 clec-198 [Caenorhabditis elegans (taxid:6239)]

 Score = 169 (64.5 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 45/129 (34%), Positives = 66/129 (51%)

Query:    12 TSDTGDQTYSETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSIT 71
             TS T   T + +T  ++T+ +P+ TTT P+ T+  P  TTT P+ T   P+ TTT P+ T
Sbjct:   241 TSYTCASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTT---PTTTTTTPTTT 297

Query:    72 SKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSLXXXXXXXXXXXXXXXXXXVSGTTTES 131
             + E   TTTE + T+  P+ TTT P+ T+   S                    + TTT+ 
Sbjct:   298 TTES--TTTETTSTTT-PTTTTTAPTTTTTA-STTTFKTTTITTTTQTTTPTTTATTTKP 353

Query:   132 CATTEPSTT 140
               TT P+TT
Sbjct:   354 TTTT-PTTT 361

GO:0030246 "carbohydrate binding" evidence=IEA

UNIPROTKB|E7EUV1 MUC2 "Mucin-2" [Homo sapiens (taxid:9606)]

 Score = 174 (66.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 60/196 (30%), Positives = 75/196 (38%)

Query:     1 MTQLIINDDKKTSDTGDQTYSETTEPSITSKEP--SVTTTEPSITSKEPFVTTTE---PS 55
             M + I      T+       S TT P  T+  P  + TTT P  T+  P +TTT    P+
Sbjct:  1392 MDKCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPT 1451

Query:    56 ITSKEP-SVTTTEPSITSKEPSVTTTEPSITSKEP--SVTTTEPSITSKEPSLXXXXXXX 112
              T   P S TTT P  T+  P  TT  P  T+  P  + TTT P  T+  P         
Sbjct:  1452 TTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPP 1511

Query:   113 XXXXXXXXXXXVSG---TTTESCATTEPSTTASHHEKYSPGQHDTYRHVTFEPCARKVCV 169
                         S    TTT    TT P TT +     +P    T    T  P      V
Sbjct:  1512 ASTTTLPPTTTPSPPTTTTTTPPPTTTPITTTTTVTP-TPTPTGTQTPTT-TPITTTTTV 1569

Query:   170 TPRPRRSGTASPPLVP 185
             TP P  +GT +P   P
Sbjct:  1570 TPTPTPTGTQTPTSTP 1585

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	205
COG3889	872	COG3889, COG3889, Predicted solute binding protein	2e-05
COG3889	872	COG3889, COG3889, Predicted solute binding protein	6e-05
COG3889	872	COG3889, COG3889, Predicted solute binding protein	0.002

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 35  VTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTEPSITSKEPSVTTT 94
            + T  SIT+   F      S T  E +++ +  S TS    + TT   IT    +VT T
Sbjct: 759 ASGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTS--ILIETTSVVITK---TVTQT 813

Query: 95  EPSITSKEPSLTTTEPSITSKESSEITTEVSGTTTESCAT 134
           + + +S  P+ TT+    ++  ++  +   + T    C  
Sbjct: 814 QTTTSSPSPTQTTSPTQTSTSTTTTTSPSQTTTGGGICGP 853

Length = 872

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%)

Query: 22  ETTEPSITSKEPSVTTTEPSITSKEPFVTTTEPSITSKEPSVTTTEPSITSKEPSVTTTE 81
             T  SIT+          S T  E  ++ +  S TS    + TT   IT    +VT T+
Sbjct: 760 SGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTS--ILIETTSVVITK---TVTQTQ 814

Query: 82  PSITSKEPSVTTTEPSITSKEPSLTTTEPSITSKES 117
            + +S  P+ TT+    ++   + TTT PS T+   
Sbjct: 815 TTTSSPSPTQTTSPTQTST--STTTTTSPSQTTTGG 848

Length = 872

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 27/137 (19%), Positives = 40/137 (29%), Gaps = 15/137 (10%)

Query: 18  QTYSETTE-PSITSKEPSVTTTEPSITSKEPFVTTTEPSIT-----SKEPSVTTTEPSIT 71
            T S   + P       ++T    S+              T           + T  SIT
Sbjct: 709 TTLSSEAKNPDTVKIGQALTVYG-SLEVFPAGENWGFIPTTKRVKVRIMDPASGTGTSIT 767

Query: 72  SKEPSVTTTE--PSITSKEPSVTTTEPSITSKE------PSLTTTEPSITSKESSEITTE 123
           +           P+ T    S +    +    E          T   + TS  S   TT 
Sbjct: 768 TSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSSPSPTQTTS 827

Query: 124 VSGTTTESCATTEPSTT 140
            + T+T +  TT PS T
Sbjct: 828 PTQTSTSTTTTTSPSQT 844

Length = 872

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	205
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 3e-04
 Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 15/101 (14%)

Query: 77  VTTTEPSITSKEPSVTTTEPSITSKEPSLTTTEPSITSKE--SSEITTEVSGTTTESCAT 134
           +TT    +T    + TTT  S+     +LT  E     K      +         E   T
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE----VKSLLLKYLDCRPQDLPREVL-T 324

Query: 135 TEPSTT----ASHHEKYSPGQHDTYRHVTFEPCAR--KVCV 169
           T P        S  +       D ++HV  +      +  +
Sbjct: 325 TNPRRLSIIAESIRDG--LATWDNWKHVNCDKLTTIIESSL 363

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00