Psyllid ID: psy1297
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 427 | ||||||
| 91075930 | 298 | PREDICTED: similar to mitochondrial carn | 0.529 | 0.758 | 0.396 | 3e-48 | |
| 198246256 | 299 | mitochondrial carnitine/acylcarnitine tr | 0.473 | 0.675 | 0.481 | 3e-48 | |
| 242015856 | 299 | mitochondrial carnitine/acylcarnitine ca | 0.461 | 0.658 | 0.502 | 3e-48 | |
| 156547917 | 295 | PREDICTED: congested-like trachea protei | 0.484 | 0.701 | 0.484 | 1e-47 | |
| 357629861 | 298 | mitochondrial carnitine/acylcarnitine tr | 0.533 | 0.765 | 0.402 | 1e-46 | |
| 427787969 | 304 | Putative solute carrier family 25 carnit | 0.475 | 0.667 | 0.472 | 4e-46 | |
| 158295347 | 301 | AGAP006104-PA [Anopheles gambiae str. PE | 0.480 | 0.681 | 0.464 | 5e-46 | |
| 358341251 | 315 | mitochondrial carnitine/acylcarnitine ca | 0.491 | 0.666 | 0.466 | 9e-46 | |
| 346472097 | 285 | hypothetical protein [Amblyomma maculatu | 0.475 | 0.712 | 0.470 | 1e-45 | |
| 402586571 | 306 | mitochondrial carnitine/acylcarnitine ca | 0.533 | 0.745 | 0.394 | 2e-45 |
| >gi|91075930|ref|XP_967309.1| PREDICTED: similar to mitochondrial carnitine/acylcarnitine carrier protein [Tribolium castaneum] gi|270014645|gb|EFA11093.1| hypothetical protein TcasGA2_TC004690 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 153/280 (54%), Gaps = 54/280 (19%)
Query: 24 PADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIE 83
P D +K RLQT P + + G + LY G
Sbjct: 26 PLDTIKVRLQTMP---------------IPKPGEKPLYSGT------------------- 51
Query: 84 WTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMG 143
LDC+ ++ E I G YKGMGAPL+GVAP+ A+++ GYG G K F
Sbjct: 52 --------LDCLKTTVRNEGIRGLYKGMGAPLLGVAPIFAISFMGYGVGKKIFGPGDGQ- 102
Query: 144 QLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLS-NVYSGPVDVIRKLIQQHGL 202
QYF +G+ GI T ++APGERIKCLLQ+Q+ YSGPVDV++KL ++ G+
Sbjct: 103 HYSYLQYFTAGAFSGIFTTTIMAPGERIKCLLQIQQASTGPKTYSGPVDVVKKLYKEGGI 162
Query: 203 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGS 262
S+++G ATLLRD+PA G Y+ YE +K ++D +++ ++GTI AG
Sbjct: 163 RSIYRGSGATLLRDIPASGMYFLTYEAIKDY----------ITDHGKESPSILGTIFAGG 212
Query: 263 MAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEML 302
AGI+ W V MP DVLK+RLQTAPE YP+GIR V +++
Sbjct: 213 AAGIANWAVGMPPDVLKSRLQTAPEGTYPNGIRDVFKKLM 252
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|198246256|gb|ACH82085.1| mitochondrial carnitine/acylcarnitine translocase [Loxostege sticticalis] | Back alignment and taxonomy information |
|---|
| >gi|242015856|ref|XP_002428563.1| mitochondrial carnitine/acylcarnitine carrier protein, putative [Pediculus humanus corporis] gi|212513197|gb|EEB15825.1| mitochondrial carnitine/acylcarnitine carrier protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|156547917|ref|XP_001604306.1| PREDICTED: congested-like trachea protein-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|357629861|gb|EHJ78379.1| mitochondrial carnitine/acylcarnitine translocase [Danaus plexippus] | Back alignment and taxonomy information |
|---|
| >gi|427787969|gb|JAA59436.1| Putative solute carrier family 25 carnitine/acylcarnitine translocase member 20 [Rhipicephalus pulchellus] | Back alignment and taxonomy information |
|---|
| >gi|158295347|ref|XP_316164.4| AGAP006104-PA [Anopheles gambiae str. PEST] gi|157015993|gb|EAA11277.4| AGAP006104-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|358341251|dbj|GAA28683.2| mitochondrial carnitine/acylcarnitine carrier protein [Clonorchis sinensis] | Back alignment and taxonomy information |
|---|
| >gi|346472097|gb|AEO35893.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
|---|
| >gi|402586571|gb|EJW80508.1| mitochondrial carnitine/acylcarnitine carrier protein [Wuchereria bancrofti] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 427 | ||||||
| WB|WBGene00000996 | 312 | dif-1 [Caenorhabditis elegans | 0.482 | 0.660 | 0.474 | 2.7e-45 | |
| UNIPROTKB|Q27257 | 312 | dif-1 "Protein dif-1" [Caenorh | 0.482 | 0.660 | 0.474 | 2.7e-45 | |
| ZFIN|ZDB-GENE-040426-1869 | 300 | slc25a20 "solute carrier famil | 0.468 | 0.666 | 0.454 | 5.6e-45 | |
| MGI|MGI:1928738 | 301 | Slc25a20 "solute carrier famil | 0.473 | 0.671 | 0.450 | 3.9e-44 | |
| UNIPROTKB|Q66HP8 | 301 | Slc25a20 "Mitochondrial carnit | 0.473 | 0.671 | 0.454 | 3.9e-44 | |
| RGD|621443 | 301 | Slc25a20 "solute carrier famil | 0.473 | 0.671 | 0.450 | 6.4e-44 | |
| UNIPROTKB|Q3SZA4 | 301 | SLC25A20 "Uncharacterized prot | 0.468 | 0.664 | 0.445 | 4.5e-43 | |
| UNIPROTKB|O43772 | 301 | SLC25A20 "Mitochondrial carnit | 0.468 | 0.664 | 0.440 | 1.2e-42 | |
| UNIPROTKB|B4DWZ5 | 251 | SLC25A20 "Mitochondrial carnit | 0.468 | 0.796 | 0.440 | 1.2e-42 | |
| UNIPROTKB|E2RSN2 | 301 | SLC25A20 "Uncharacterized prot | 0.468 | 0.664 | 0.440 | 1.5e-42 |
| WB|WBGene00000996 dif-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 104/219 (47%), Positives = 139/219 (63%)
Query: 87 QLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLE 146
Q LDCV + + KE F YKGM APLVGV+PL A+ + G G K+ ++
Sbjct: 45 QFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAVFFGGCAVG-KWLQQTDPSQEMT 103
Query: 147 LWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGL--SNV-YSGPVDVIRKLIQQHGLG 203
Q +G+L G+ T ++ PGERIKCLLQVQ+ G S V Y GP+DV++KL +Q G+
Sbjct: 104 FIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGIS 163
Query: 204 SVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSM 263
S+++G ATLLRD+PA AY ++YE +K FSG+G ++T T+ AG +
Sbjct: 164 SIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEG---------AQRTLSPGATLMAGGL 214
Query: 264 AGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEML 302
AGI+ W V +PADVLK+RLQTAPE KYP GIR VL E+L
Sbjct: 215 AGIANWGVCIPADVLKSRLQTAPEGKYPDGIRGVLREVL 253
|
|
| UNIPROTKB|Q27257 dif-1 "Protein dif-1" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-1869 slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1928738 Slc25a20 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q66HP8 Slc25a20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| RGD|621443 Slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q3SZA4 SLC25A20 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O43772 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4DWZ5 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RSN2 SLC25A20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 427 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 1e-25 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 6e-14 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 5e-09 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 3e-07 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 1e-06 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 3e-05 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 4e-05 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 0.001 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-25
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 143 GQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGL 202
L L+G + G + A + P + +K LQ G S Y G +D +K+ ++ G+
Sbjct: 1 SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60
Query: 203 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSG 236
++KG LLR PA Y+ YET+K +
Sbjct: 61 RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94
|
Length = 96 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 427 | |||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0764|consensus | 299 | 100.0 | ||
| KOG0753|consensus | 317 | 100.0 | ||
| KOG0758|consensus | 297 | 100.0 | ||
| KOG0762|consensus | 311 | 100.0 | ||
| KOG0757|consensus | 319 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0760|consensus | 302 | 100.0 | ||
| KOG0754|consensus | 294 | 100.0 | ||
| KOG0759|consensus | 286 | 100.0 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0751|consensus | 694 | 100.0 | ||
| KOG0761|consensus | 361 | 100.0 | ||
| KOG0036|consensus | 463 | 100.0 | ||
| KOG0768|consensus | 323 | 100.0 | ||
| KOG0770|consensus | 353 | 100.0 | ||
| KOG0749|consensus | 298 | 100.0 | ||
| KOG0765|consensus | 333 | 100.0 | ||
| KOG0766|consensus | 297 | 100.0 | ||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0763|consensus | 301 | 100.0 | ||
| KOG0750|consensus | 304 | 100.0 | ||
| KOG0756|consensus | 299 | 100.0 | ||
| KOG0755|consensus | 320 | 100.0 | ||
| KOG0764|consensus | 299 | 100.0 | ||
| KOG0769|consensus | 308 | 100.0 | ||
| KOG0753|consensus | 317 | 100.0 | ||
| KOG0758|consensus | 297 | 100.0 | ||
| KOG0767|consensus | 333 | 100.0 | ||
| KOG0762|consensus | 311 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0768|consensus | 323 | 100.0 | ||
| KOG0760|consensus | 302 | 99.98 | ||
| KOG0757|consensus | 319 | 99.98 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.97 | |
| KOG0754|consensus | 294 | 99.97 | ||
| KOG0759|consensus | 286 | 99.97 | ||
| KOG0761|consensus | 361 | 99.97 | ||
| KOG0751|consensus | 694 | 99.97 | ||
| KOG0765|consensus | 333 | 99.96 | ||
| KOG0766|consensus | 297 | 99.95 | ||
| KOG0763|consensus | 301 | 99.95 | ||
| KOG0756|consensus | 299 | 99.95 | ||
| KOG0749|consensus | 298 | 99.95 | ||
| KOG0750|consensus | 304 | 99.94 | ||
| KOG0036|consensus | 463 | 99.94 | ||
| KOG0755|consensus | 320 | 99.93 | ||
| KOG0770|consensus | 353 | 99.93 | ||
| KOG0769|consensus | 308 | 99.91 | ||
| KOG0767|consensus | 333 | 99.88 | ||
| KOG2745|consensus | 321 | 99.87 | ||
| KOG1519|consensus | 297 | 99.82 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.75 | |
| KOG1519|consensus | 297 | 99.64 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.59 | |
| KOG2954|consensus | 427 | 99.57 | ||
| KOG2745|consensus | 321 | 99.44 | ||
| KOG2954|consensus | 427 | 99.22 | ||
| TIGR00898 | 505 | 2A0119 cation transport protein. | 97.65 |
| >KOG0752|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-52 Score=380.74 Aligned_cols=252 Identities=20% Similarity=0.367 Sum_probs=222.6
Q ss_pred chhhHHhhhhhhcccccccchHHHHHHHhcCCCCCCCCcHHHHHHHHHhhhccccccCCchHHHHhHHHHHhHHHHHHHH
Q psy1297 5 GVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEW 84 (427)
Q Consensus 5 ~~~~~~g~~a~~~~~~i~~Pld~iKtr~Q~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~~~~~~~~~~~~f~~~~~ 84 (427)
+..+++|++||+++.+++.|||+||+|+|++.+. .-...++|+
T Consensus 28 ~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~-----------------~~~~k~~g~-------------------- 70 (320)
T KOG0752|consen 28 AKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEP-----------------SKTSKYPGV-------------------- 70 (320)
T ss_pred HHHHhcchHHHHHHHHhcCchhHceEEEEecccc-----------------ccccccccH--------------------
Confidence 4567899999999999999999999999999852 011456676
Q ss_pred HHHHhhHHHHHHHHHHhhCccccccCchHhHhhhhhhhhHHHHHHHHHHHHhhccccCCCchHHHHHHHHHHHHHHHHHh
Q psy1297 85 TLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAAL 164 (427)
Q Consensus 85 ~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~ 164 (427)
.+.+++|+++||++|||||..+++++.+|+.+++|..||.+++.....++....++..+++||++||+++.++
T Consensus 71 -------~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~ 143 (320)
T KOG0752|consen 71 -------IQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLA 143 (320)
T ss_pred -------HHHHHHHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999998644433344788999999999999999999
Q ss_pred hcHHHHHHHHHhcccCCCCCCcCChHHHHHHHHHhhCccccccchHHHHHHHHhhHhhHHHHHHHHHHh-hccCCCCccc
Q psy1297 165 VAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHV-FSGQGDSVIE 243 (427)
Q Consensus 165 ~~Pld~vk~r~q~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~~k~~-~~~~~~~~~~ 243 (427)
+||+|++|+|+-++.. ...|+++.+++++|+++||++|||||+.|++++.+|+.++.|.+||.+|++ +.....+
T Consensus 144 tyPLDlvRtRLa~q~~--~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~--- 218 (320)
T KOG0752|consen 144 TYPLDLLRTRLAVQGE--LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGN--- 218 (320)
T ss_pred cCcHHHhhhheeeecc--cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhccccccc---
Confidence 9999999999999876 337999999999999999999999999999999999999999999999994 4333221
Q ss_pred ccccccCCCchHHHhhHHHHHHHHHHHhhccHHHHHHHhcCCCCC------CCCCcHHHHHHHHhHhhccccccc
Q psy1297 244 VSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPED------KYPHGIRSVLSEMLEPAMYAAPYC 312 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~dvvk~r~q~~~~~------~y~~~~~~~~~~i~~~~G~~g~~~ 312 (427)
...+.+.+++||++||+++++++||||+||+|||+.+.. +| ++++||++.|+++||+.|+|.
T Consensus 219 ------~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~-~~~~~~~~~i~~~EG~~gLYk 286 (320)
T KOG0752|consen 219 ------KELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRY-KGVLDAFRQIVKTEGVKGLYK 286 (320)
T ss_pred ------chhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcccccccccc-ccHHHHHHHHHHHhhhhhhhc
Confidence 233488999999999999999999999999999999842 56 799999999999999999993
|
|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 427 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 7e-08 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 7e-05 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 427 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-35 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 4e-18 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-12 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 4e-31 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 6e-24 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-23 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-35
Identities = 67/329 (20%), Positives = 110/329 (33%), Gaps = 64/329 (19%)
Query: 24 PADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIE 83
P D K RLQ E S+ L R YRG
Sbjct: 21 PLDTAKVRLQIQGE-----------SQGLVRTAASAQYRG-------------------- 49
Query: 84 WTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMG 143
+L + +++ E Y G+ A L ++ Y + +F+T
Sbjct: 50 -------VLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--E 100
Query: 144 QLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQ-EGGLSNVYSGPVDVIRKLIQQHGL 202
+ L+GS G + A+ P + +K Q Q G Y V+ + + ++ G+
Sbjct: 101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGI 160
Query: 203 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGS 262
++KG S + R+ A Y+ +K T L T+
Sbjct: 161 RGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL----------MTDDLPCHFTSAF 210
Query: 263 MAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLE----PAMYA--APYCL--- 313
AG ++A P DV+KTR + +Y H ML A Y P L
Sbjct: 211 GAGFCTTVIASPVDVVKTRYMNSALGQY-HSAGHCALTMLRKEGPRAFYKGFMPSFLRLG 269
Query: 314 ---SYVFTSLDLSYRCYIPECESPDGPFY 339
+F + + R + +S + PF+
Sbjct: 270 SWNVVMFVTYEQLKRALMAAYQSREAPFH 298
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 427 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=372.16 Aligned_cols=258 Identities=23% Similarity=0.307 Sum_probs=225.2
Q ss_pred chhhHHhhhhhhcccccccchHHHHHHHhcCCCCCCCCcHHHHHHHHHhhhccccccCCchHHHHhHHHHHhHHHHHHHH
Q psy1297 5 GVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEW 84 (427)
Q Consensus 5 ~~~~~~g~~a~~~~~~i~~Pld~iKtr~Q~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~~~~~~~~~~~~f~~~~~ 84 (427)
..++++|++|++++.+++||||+||+|+|++..... .. .......|+|.
T Consensus 2 ~~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~---~~--------~~~~~~~~~~~-------------------- 50 (303)
T 2lck_A 2 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQG---LV--------RTAASAQYRGV-------------------- 50 (303)
T ss_dssp CCHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCS---HH--------HHCSCSSCSCH--------------------
T ss_pred chhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhcccc---cc--------ccccCCCCCCH--------------------
Confidence 357999999999999999999999999999875311 00 00112357777
Q ss_pred HHHHhhHHHHHHHHHHhhCccccccCchHhHhhhhhhhhHHHHHHHHHHHHhhccccCCCchHHHHHHHHHHHHHHHHHh
Q psy1297 85 TLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAAL 164 (427)
Q Consensus 85 ~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~ 164 (427)
++++++|+++||++|||||+.+++++.+|..+++|.+|+.+|+.+.+.. +..+....+++|++||+++.++
T Consensus 51 -------~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~--~~~~~~~~~~ag~~ag~~~~~~ 121 (303)
T 2lck_A 51 -------LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRLLAGSTTGALAVAV 121 (303)
T ss_dssp -------HHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCC--SSCCHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887631 2467788999999999999999
Q ss_pred hcHHHHHHHHHhcccCC-CCCCcCChHHHHHHHHHhhCccccccchHHHHHHHHhhHhhHHHHHHHHHHhhccCCCCccc
Q psy1297 165 VAPGERIKCLLQVQEGG-LSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIE 243 (427)
Q Consensus 165 ~~Pld~vk~r~q~~~~~-~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~~k~~~~~~~~~~~~ 243 (427)
++|+|+||+|+|++... ....|+++++++++|+++||++|||||+.|+++|.+|+.+++|.+||.+|+.+.+....
T Consensus 122 ~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~--- 198 (303)
T 2lck_A 122 AQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLM--- 198 (303)
T ss_dssp SCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSC---
T ss_pred cCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---
Confidence 99999999999998642 34578999999999999999999999999999999999999999999999988654321
Q ss_pred ccccccCCCchHHHhhHHHHHHHHHHHhhccHHHHHHHhcCCCCCCCCCcHHHHHHHHhHhhcccccccc
Q psy1297 244 VSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCL 313 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~dvvk~r~q~~~~~~y~~~~~~~~~~i~~~~G~~g~~~~ 313 (427)
..+....+++|++||++++++++|+||||+|||++...+| +++++|+++++++||+.|||.+
T Consensus 199 -------~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y-~~~~~~~~~i~~~eG~~glyrG 260 (303)
T 2lck_A 199 -------TDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQY-HSAGHCALTMLRKEGPRAFYKG 260 (303)
T ss_dssp -------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSC-CSHHHHHHHHHHSSCTHHHHSC
T ss_pred -------CCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccccc-CCHHHHHHHHHHHcChHHhhcc
Confidence 1226788999999999999999999999999999987789 9999999999999999999943
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 427 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 8e-13 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 3e-10 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 5e-06 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 7e-06 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 66.3 bits (160), Expect = 8e-13
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 10/162 (6%)
Query: 145 LELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEG----GLSNVYSGPVDVIRKLIQQH 200
L + FL+G + ++ VAP ER+K LLQVQ Y G +D + ++ ++
Sbjct: 4 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 63
Query: 201 GLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITA 260
G S ++G A ++R P +A + K +F G D + G + +
Sbjct: 64 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD------RHKQFWRYFAGNLAS 117
Query: 261 GSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEML 302
G AG + P D +TRL + L +
Sbjct: 118 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI 159
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 427 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.97 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=4.9e-45 Score=340.54 Aligned_cols=256 Identities=18% Similarity=0.280 Sum_probs=224.1
Q ss_pred chhhHHhhhhhhcccccccchHHHHHHHhcCCCCCCCCcHHHHHHHHHhhhccccccCCchHHHHhHHHHHhHHHHHHHH
Q psy1297 5 GVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEW 84 (427)
Q Consensus 5 ~~~~~~g~~a~~~~~~i~~Pld~iKtr~Q~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~~~~~~~~~~~~f~~~~~ 84 (427)
..+|++|++|++++.+++||||+||+|+|++... +..+..+.|+|.
T Consensus 7 ~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~--------------~~~~~~~~~~~~-------------------- 52 (292)
T d1okca_ 7 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS--------------KQISAEKQYKGI-------------------- 52 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGC--------------SSCCGGGSCCSH--------------------
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCC--------------CCCCcccccCCH--------------------
Confidence 3579999999999999999999999999998753 122334667887
Q ss_pred HHHHhhHHHHHHHHHHhhCccccccCchHhHhhhhhhhhHHHHHHHHHHHHhhccccCC---CchHHHHHHHHHHHHHHH
Q psy1297 85 TLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMG---QLELWQYFLSGSLGGIVT 161 (427)
Q Consensus 85 ~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~ag~~~ 161 (427)
++++++++++||+++||||+.+.+++..+...++|..|+.+++.+....... .......+++|++||+++
T Consensus 53 -------~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 125 (292)
T d1okca_ 53 -------IDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATS 125 (292)
T ss_dssp -------HHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhH
Confidence 9999999999999999999999999999999999999999999987752222 234567788999999999
Q ss_pred HHhhcHHHHHHHHHhcccCC--CCCCcCChHHHHHHHHHhhCccccccchHHHHHHHHhhHhhHHHHHHHHHHhhccCCC
Q psy1297 162 AALVAPGERIKCLLQVQEGG--LSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGD 239 (427)
Q Consensus 162 ~~~~~Pld~vk~r~q~~~~~--~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~~k~~~~~~~~ 239 (427)
.++++|+|++|+|+|.+... ....|.++.+++++++++||+++||+|+.++++|.+|+.+++|..||.+|+.+.+...
T Consensus 126 ~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 205 (292)
T d1okca_ 126 LCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN 205 (292)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGC
T ss_pred HhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccccc
Confidence 99999999999999998653 4557889999999999999999999999999999999999999999999987654322
Q ss_pred CcccccccccCCCchHHHhhHHHHHHHHHHHhhccHHHHHHHhcCCCCC-----CCCCcHHHHHHHHhHhhcccccccce
Q psy1297 240 SVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPED-----KYPHGIRSVLSEMLEPAMYAAPYCLS 314 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~dvvk~r~q~~~~~-----~y~~~~~~~~~~i~~~~G~~g~~~~~ 314 (427)
......+++|+++++++++++||+||||+|||.+... +| ++++|++++++++||+.|||.+.
T Consensus 206 ------------~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y-~~~~~~~~~i~~~eG~~~lyrG~ 272 (292)
T d1okca_ 206 ------------VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMY-TGTVDCWRKIAKDEGPKAFFKGA 272 (292)
T ss_dssp ------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSC-SSHHHHHHHHHHHHCGGGGGTTH
T ss_pred ------------cchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCC-CCHHHHHHHHHHhcCcCcccccH
Confidence 2277889999999999999999999999999998754 58 89999999999999999999654
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|