Psyllid ID: psy1297


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------
MSIDGVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILVEVSRRI
ccccHHHHHHHHHHHHHccccccccHHHHHHccccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccHHHHHHHcccccccEEHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHcHHHHHHcccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEccccHHHHHcccccccEEcccccccHcccHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccHEEEEHHHccccccccccccHHHHHHHHHHHccccEEcccccHHHHHHccHHHEEEHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcHHHHHEEccHHHHHHHHHHccccccccHHHHHHHHcccHHHHHccccHHEEHHHHHHHHHHHHcccccccccHHHHHHcccccccHHHHccccccccccccEcccHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHEEEEEcccc
msidgvdyVWSHLyisfpdfpampaDVLKTRlqtapedkyphgIRSVLSEMLeregprtlyrgatpVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGfykgmgaplvgvaplnalnyfgygtglkfftneknmGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQegglsnvysgpVDVIRKLIQQhglgsvfkGFSATLLRDVPAFGAYYAMYETVKHvfsgqgdsvievsdqtrkttplvgtitagsMAGISYWIVAMPADVLKTRlqtapedkyphgIRSVLSEMLepamyaapyCLSYVFTSLDlsyrcyipecespdgpfyaswlsdaipfdpvkglskceryQYVNvtdtctansfqDDIVEKCTQWIYkypeeknilvEDDIVEKCTQWIYKYPEEKNILVEVSRRI
MSIDGVDYVWSHLYISFPDFPAMPADVLKTRLqtapedkyphGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQtapedkypHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDtctansfqdDIVEKCTQWIYKYPeeknilvedDIVEKCTQWiykypeeknilVEVSRRI
MSIDGVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILVEVSRRI
****GVDYVWSHLYISFPDFPAMPADVLKTRLQ********HGIRSVLSEML***GPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILV******
*SIDGVDYVWSHLYISFPDFPAMPADVLKTRLQTAPE****HGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKF***********LWQYFLSGSLGGIVTAALVAPGERIKCL****************DVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSG***************TPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILVEVSRR*
MSIDGVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILVEVSRRI
MSIDGVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGD**********KTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILVEVSRRI
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSIDGVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEWTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCLSYVFTSLDLSYRCYIPECESPDGPFYASWLSDAIPFDPVKGLSKCERYQYVNVTDTCTANSFQDDIVEKCTQWIYKYPEEKNILVEDDIVEKCTQWIYKYPEEKNILVEVSRRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query427 2.2.26 [Sep-21-2011]
Q27257312 Protein dif-1 OS=Caenorha yes N/A 0.484 0.663 0.463 1e-46
Q9Z2Z6301 Mitochondrial carnitine/a yes N/A 0.475 0.674 0.448 1e-44
P97521301 Mitochondrial carnitine/a yes N/A 0.475 0.674 0.448 2e-44
Q8HXY2301 Mitochondrial carnitine/a N/A N/A 0.473 0.671 0.450 1e-43
O43772301 Mitochondrial carnitine/a yes N/A 0.475 0.674 0.433 5e-43
Q9VQG4306 Congested-like trachea pr yes N/A 0.531 0.741 0.382 1e-42
Q08DK7298 Mitochondrial carnitine/a no N/A 0.412 0.590 0.324 5e-24
Q8N8R3303 Mitochondrial carnitine/a no N/A 0.409 0.577 0.316 8e-22
Q5HZE0306 Mitochondrial carnitine/a no N/A 0.409 0.571 0.310 8e-22
Q10248298 Uncharacterized mitochond yes N/A 0.426 0.610 0.328 9e-22
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function desciption
 Score =  187 bits (476), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/220 (46%), Positives = 138/220 (62%), Gaps = 13/220 (5%)

Query: 87  QLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLE 146
           Q    LDCV + + KE  F  YKGM APLVGV+PL A+ + G   G K+        ++ 
Sbjct: 45  QFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAVFFGGCAVG-KWLQQTDPSQEMT 103

Query: 147 LWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNV---YSGPVDVIRKLIQQHGLG 203
             Q   +G+L G+ T  ++ PGERIKCLLQVQ+ G +     Y GP+DV++KL +Q G+ 
Sbjct: 104 FIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGIS 163

Query: 204 SVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSM 263
           S+++G  ATLLRD+PA  AY ++YE +K  FSG+G          ++T     T+ AG +
Sbjct: 164 SIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEG---------AQRTLSPGATLMAGGL 214

Query: 264 AGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLE 303
           AGI+ W V +PADVLK+RLQTAPE KYP GIR VL E+L 
Sbjct: 215 AGIANWGVCIPADVLKSRLQTAPEGKYPDGIRGVLREVLR 254




Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation.
Caenorhabditis elegans (taxid: 6239)
>sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1 Back     alignment and function description
>sp|O43772|MCAT_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1 Back     alignment and function description
>sp|Q9VQG4|COLT_DROME Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1 Back     alignment and function description
>sp|Q08DK7|MCATL_BOVIN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1 Back     alignment and function description
>sp|Q8N8R3|MCATL_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2 Back     alignment and function description
>sp|Q5HZE0|MCATL_RAT Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1 Back     alignment and function description
>sp|Q10248|YD1K_SCHPO Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.20c PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query427
91075930298 PREDICTED: similar to mitochondrial carn 0.529 0.758 0.396 3e-48
198246256299 mitochondrial carnitine/acylcarnitine tr 0.473 0.675 0.481 3e-48
242015856299 mitochondrial carnitine/acylcarnitine ca 0.461 0.658 0.502 3e-48
156547917295 PREDICTED: congested-like trachea protei 0.484 0.701 0.484 1e-47
357629861298 mitochondrial carnitine/acylcarnitine tr 0.533 0.765 0.402 1e-46
427787969304 Putative solute carrier family 25 carnit 0.475 0.667 0.472 4e-46
158295347301 AGAP006104-PA [Anopheles gambiae str. PE 0.480 0.681 0.464 5e-46
358341251315 mitochondrial carnitine/acylcarnitine ca 0.491 0.666 0.466 9e-46
346472097285 hypothetical protein [Amblyomma maculatu 0.475 0.712 0.470 1e-45
402586571306 mitochondrial carnitine/acylcarnitine ca 0.533 0.745 0.394 2e-45
>gi|91075930|ref|XP_967309.1| PREDICTED: similar to mitochondrial carnitine/acylcarnitine carrier protein [Tribolium castaneum] gi|270014645|gb|EFA11093.1| hypothetical protein TcasGA2_TC004690 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/280 (39%), Positives = 153/280 (54%), Gaps = 54/280 (19%)

Query: 24  PADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIE 83
           P D +K RLQT P               + + G + LY G                    
Sbjct: 26  PLDTIKVRLQTMP---------------IPKPGEKPLYSGT------------------- 51

Query: 84  WTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMG 143
                   LDC+   ++ E I G YKGMGAPL+GVAP+ A+++ GYG G K F       
Sbjct: 52  --------LDCLKTTVRNEGIRGLYKGMGAPLLGVAPIFAISFMGYGVGKKIFGPGDGQ- 102

Query: 144 QLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLS-NVYSGPVDVIRKLIQQHGL 202
                QYF +G+  GI T  ++APGERIKCLLQ+Q+       YSGPVDV++KL ++ G+
Sbjct: 103 HYSYLQYFTAGAFSGIFTTTIMAPGERIKCLLQIQQASTGPKTYSGPVDVVKKLYKEGGI 162

Query: 203 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGS 262
            S+++G  ATLLRD+PA G Y+  YE +K            ++D  +++  ++GTI AG 
Sbjct: 163 RSIYRGSGATLLRDIPASGMYFLTYEAIKDY----------ITDHGKESPSILGTIFAGG 212

Query: 263 MAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEML 302
            AGI+ W V MP DVLK+RLQTAPE  YP+GIR V  +++
Sbjct: 213 AAGIANWAVGMPPDVLKSRLQTAPEGTYPNGIRDVFKKLM 252




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198246256|gb|ACH82085.1| mitochondrial carnitine/acylcarnitine translocase [Loxostege sticticalis] Back     alignment and taxonomy information
>gi|242015856|ref|XP_002428563.1| mitochondrial carnitine/acylcarnitine carrier protein, putative [Pediculus humanus corporis] gi|212513197|gb|EEB15825.1| mitochondrial carnitine/acylcarnitine carrier protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|156547917|ref|XP_001604306.1| PREDICTED: congested-like trachea protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|357629861|gb|EHJ78379.1| mitochondrial carnitine/acylcarnitine translocase [Danaus plexippus] Back     alignment and taxonomy information
>gi|427787969|gb|JAA59436.1| Putative solute carrier family 25 carnitine/acylcarnitine translocase member 20 [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|158295347|ref|XP_316164.4| AGAP006104-PA [Anopheles gambiae str. PEST] gi|157015993|gb|EAA11277.4| AGAP006104-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|358341251|dbj|GAA28683.2| mitochondrial carnitine/acylcarnitine carrier protein [Clonorchis sinensis] Back     alignment and taxonomy information
>gi|346472097|gb|AEO35893.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|402586571|gb|EJW80508.1| mitochondrial carnitine/acylcarnitine carrier protein [Wuchereria bancrofti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query427
WB|WBGene00000996312 dif-1 [Caenorhabditis elegans 0.482 0.660 0.474 2.7e-45
UNIPROTKB|Q27257312 dif-1 "Protein dif-1" [Caenorh 0.482 0.660 0.474 2.7e-45
ZFIN|ZDB-GENE-040426-1869300 slc25a20 "solute carrier famil 0.468 0.666 0.454 5.6e-45
MGI|MGI:1928738301 Slc25a20 "solute carrier famil 0.473 0.671 0.450 3.9e-44
UNIPROTKB|Q66HP8301 Slc25a20 "Mitochondrial carnit 0.473 0.671 0.454 3.9e-44
RGD|621443301 Slc25a20 "solute carrier famil 0.473 0.671 0.450 6.4e-44
UNIPROTKB|Q3SZA4301 SLC25A20 "Uncharacterized prot 0.468 0.664 0.445 4.5e-43
UNIPROTKB|O43772301 SLC25A20 "Mitochondrial carnit 0.468 0.664 0.440 1.2e-42
UNIPROTKB|B4DWZ5251 SLC25A20 "Mitochondrial carnit 0.468 0.796 0.440 1.2e-42
UNIPROTKB|E2RSN2301 SLC25A20 "Uncharacterized prot 0.468 0.664 0.440 1.5e-42
WB|WBGene00000996 dif-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 104/219 (47%), Positives = 139/219 (63%)

Query:    87 QLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLE 146
             Q    LDCV + + KE  F  YKGM APLVGV+PL A+ + G   G K+        ++ 
Sbjct:    45 QFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAVFFGGCAVG-KWLQQTDPSQEMT 103

Query:   147 LWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGL--SNV-YSGPVDVIRKLIQQHGLG 203
               Q   +G+L G+ T  ++ PGERIKCLLQVQ+ G   S V Y GP+DV++KL +Q G+ 
Sbjct:   104 FIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGIS 163

Query:   204 SVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSM 263
             S+++G  ATLLRD+PA  AY ++YE +K  FSG+G          ++T     T+ AG +
Sbjct:   164 SIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEG---------AQRTLSPGATLMAGGL 214

Query:   264 AGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEML 302
             AGI+ W V +PADVLK+RLQTAPE KYP GIR VL E+L
Sbjct:   215 AGIANWGVCIPADVLKSRLQTAPEGKYPDGIRGVLREVL 253


GO:0005215 "transporter activity" evidence=IEA
GO:0005743 "mitochondrial inner membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP
UNIPROTKB|Q27257 dif-1 "Protein dif-1" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1869 slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1928738 Slc25a20 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q66HP8 Slc25a20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|621443 Slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZA4 SLC25A20 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O43772 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B4DWZ5 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSN2 SLC25A20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query427
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-14
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 3e-05
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-05
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.001
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 99.6 bits (249), Expect = 1e-25
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query: 143 GQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGL 202
             L      L+G + G + A +  P + +K  LQ    G S  Y G +D  +K+ ++ G+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 203 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSG 236
             ++KG    LLR  PA   Y+  YET+K +   
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 427
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
KOG0753|consensus317 100.0
KOG0758|consensus297 100.0
KOG0762|consensus311 100.0
KOG0757|consensus319 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760|consensus302 100.0
KOG0754|consensus294 100.0
KOG0759|consensus286 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751|consensus694 100.0
KOG0761|consensus361 100.0
KOG0036|consensus463 100.0
KOG0768|consensus323 100.0
KOG0770|consensus353 100.0
KOG0749|consensus298 100.0
KOG0765|consensus333 100.0
KOG0766|consensus297 100.0
KOG0752|consensus320 100.0
KOG0763|consensus301 100.0
KOG0750|consensus304 100.0
KOG0756|consensus299 100.0
KOG0755|consensus320 100.0
KOG0764|consensus299 100.0
KOG0769|consensus308 100.0
KOG0753|consensus317 100.0
KOG0758|consensus297 100.0
KOG0767|consensus333 100.0
KOG0762|consensus311 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768|consensus323 100.0
KOG0760|consensus302 99.98
KOG0757|consensus319 99.98
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0754|consensus294 99.97
KOG0759|consensus286 99.97
KOG0761|consensus361 99.97
KOG0751|consensus694 99.97
KOG0765|consensus333 99.96
KOG0766|consensus297 99.95
KOG0763|consensus301 99.95
KOG0756|consensus299 99.95
KOG0749|consensus298 99.95
KOG0750|consensus304 99.94
KOG0036|consensus463 99.94
KOG0755|consensus320 99.93
KOG0770|consensus353 99.93
KOG0769|consensus308 99.91
KOG0767|consensus333 99.88
KOG2745|consensus321 99.87
KOG1519|consensus297 99.82
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
KOG1519|consensus297 99.64
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.59
KOG2954|consensus427 99.57
KOG2745|consensus321 99.44
KOG2954|consensus427 99.22
TIGR00898 505 2A0119 cation transport protein. 97.65
>KOG0752|consensus Back     alignment and domain information
Probab=100.00  E-value=1.8e-52  Score=380.74  Aligned_cols=252  Identities=20%  Similarity=0.367  Sum_probs=222.6

Q ss_pred             chhhHHhhhhhhcccccccchHHHHHHHhcCCCCCCCCcHHHHHHHHHhhhccccccCCchHHHHhHHHHHhHHHHHHHH
Q psy1297           5 GVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEW   84 (427)
Q Consensus         5 ~~~~~~g~~a~~~~~~i~~Pld~iKtr~Q~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~~~~~~~~~~~~f~~~~~   84 (427)
                      +..+++|++||+++.+++.|||+||+|+|++.+.                 .-...++|+                    
T Consensus        28 ~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~-----------------~~~~k~~g~--------------------   70 (320)
T KOG0752|consen   28 AKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEP-----------------SKTSKYPGV--------------------   70 (320)
T ss_pred             HHHHhcchHHHHHHHHhcCchhHceEEEEecccc-----------------ccccccccH--------------------
Confidence            4567899999999999999999999999999852                 011456676                    


Q ss_pred             HHHHhhHHHHHHHHHHhhCccccccCchHhHhhhhhhhhHHHHHHHHHHHHhhccccCCCchHHHHHHHHHHHHHHHHHh
Q psy1297          85 TLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAAL  164 (427)
Q Consensus        85 ~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~  164 (427)
                             .+.+++|+++||++|||||..+++++.+|+.+++|..||.+++.....++....++..+++||++||+++.++
T Consensus        71 -------~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~  143 (320)
T KOG0752|consen   71 -------IQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLA  143 (320)
T ss_pred             -------HHHHHHHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHh
Confidence                   9999999999999999999999999999999999999999998644433344788999999999999999999


Q ss_pred             hcHHHHHHHHHhcccCCCCCCcCChHHHHHHHHHhhCccccccchHHHHHHHHhhHhhHHHHHHHHHHh-hccCCCCccc
Q psy1297         165 VAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHV-FSGQGDSVIE  243 (427)
Q Consensus       165 ~~Pld~vk~r~q~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~~k~~-~~~~~~~~~~  243 (427)
                      +||+|++|+|+-++..  ...|+++.+++++|+++||++|||||+.|++++.+|+.++.|.+||.+|++ +.....+   
T Consensus       144 tyPLDlvRtRLa~q~~--~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~---  218 (320)
T KOG0752|consen  144 TYPLDLLRTRLAVQGE--LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGN---  218 (320)
T ss_pred             cCcHHHhhhheeeecc--cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhccccccc---
Confidence            9999999999999876  337999999999999999999999999999999999999999999999994 4333221   


Q ss_pred             ccccccCCCchHHHhhHHHHHHHHHHHhhccHHHHHHHhcCCCCC------CCCCcHHHHHHHHhHhhccccccc
Q psy1297         244 VSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPED------KYPHGIRSVLSEMLEPAMYAAPYC  312 (427)
Q Consensus       244 ~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~dvvk~r~q~~~~~------~y~~~~~~~~~~i~~~~G~~g~~~  312 (427)
                            ...+.+.+++||++||+++++++||||+||+|||+.+..      +| ++++||++.|+++||+.|+|.
T Consensus       219 ------~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~-~~~~~~~~~i~~~EG~~gLYk  286 (320)
T KOG0752|consen  219 ------KELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRY-KGVLDAFRQIVKTEGVKGLYK  286 (320)
T ss_pred             ------chhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcccccccccc-ccHHHHHHHHHHHhhhhhhhc
Confidence                  233488999999999999999999999999999999842      56 799999999999999999993



>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query427
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 7e-08
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 7e-05
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 145 LELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEG----GLSNVYSGPVDVIRKLIQQH 200 L + FL+G + ++ VAP ER+K LLQVQ Y G +D + ++ ++ Sbjct: 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 64 Query: 201 GLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITA 260 G S ++G A ++R P +A + K +F G V + G + + Sbjct: 65 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG------GVDRHKQFWRYFAGNLAS 118 Query: 261 GSMAGISYWIVAMPADVLKTRL 282 G AG + P D +TRL Sbjct: 119 GGAAGATSLCFVYPLDFARTRL 140
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query427
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-35
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-18
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-12
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-31
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-24
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-23
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  131 bits (332), Expect = 2e-35
 Identities = 67/329 (20%), Positives = 110/329 (33%), Gaps = 64/329 (19%)

Query: 24  PADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIE 83
           P D  K RLQ   E           S+ L R      YRG                    
Sbjct: 21  PLDTAKVRLQIQGE-----------SQGLVRTAASAQYRG-------------------- 49

Query: 84  WTLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMG 143
                  +L  +  +++ E     Y G+ A L       ++    Y +  +F+T      
Sbjct: 50  -------VLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--E 100

Query: 144 QLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQ-EGGLSNVYSGPVDVIRKLIQQHGL 202
              +    L+GS  G +  A+  P + +K   Q Q   G    Y   V+  + + ++ G+
Sbjct: 101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGI 160

Query: 203 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGS 262
             ++KG S  + R+     A    Y+ +K                   T  L    T+  
Sbjct: 161 RGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL----------MTDDLPCHFTSAF 210

Query: 263 MAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLE----PAMYA--APYCL--- 313
            AG    ++A P DV+KTR   +   +Y H        ML      A Y    P  L   
Sbjct: 211 GAGFCTTVIASPVDVVKTRYMNSALGQY-HSAGHCALTMLRKEGPRAFYKGFMPSFLRLG 269

Query: 314 ---SYVFTSLDLSYRCYIPECESPDGPFY 339
                +F + +   R  +   +S + PF+
Sbjct: 270 SWNVVMFVTYEQLKRALMAAYQSREAPFH 298


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query427
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=3.9e-49  Score=372.16  Aligned_cols=258  Identities=23%  Similarity=0.307  Sum_probs=225.2

Q ss_pred             chhhHHhhhhhhcccccccchHHHHHHHhcCCCCCCCCcHHHHHHHHHhhhccccccCCchHHHHhHHHHHhHHHHHHHH
Q psy1297           5 GVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEW   84 (427)
Q Consensus         5 ~~~~~~g~~a~~~~~~i~~Pld~iKtr~Q~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~~~~~~~~~~~~f~~~~~   84 (427)
                      ..++++|++|++++.+++||||+||+|+|++.....   ..        .......|+|.                    
T Consensus         2 ~~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~---~~--------~~~~~~~~~~~--------------------   50 (303)
T 2lck_A            2 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQG---LV--------RTAASAQYRGV--------------------   50 (303)
T ss_dssp             CCHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCS---HH--------HHCSCSSCSCH--------------------
T ss_pred             chhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhcccc---cc--------ccccCCCCCCH--------------------
Confidence            357999999999999999999999999999875311   00        00112357777                    


Q ss_pred             HHHHhhHHHHHHHHHHhhCccccccCchHhHhhhhhhhhHHHHHHHHHHHHhhccccCCCchHHHHHHHHHHHHHHHHHh
Q psy1297          85 TLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAAL  164 (427)
Q Consensus        85 ~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~  164 (427)
                             ++++++|+++||++|||||+.+++++.+|..+++|.+|+.+|+.+.+..  +..+....+++|++||+++.++
T Consensus        51 -------~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~--~~~~~~~~~~ag~~ag~~~~~~  121 (303)
T 2lck_A           51 -------LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRLLAGSTTGALAVAV  121 (303)
T ss_dssp             -------HHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCC--SSCCHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cCCcHHHHHHHHHHHHHHHHHH
Confidence                   9999999999999999999999999999999999999999999887631  2467788999999999999999


Q ss_pred             hcHHHHHHHHHhcccCC-CCCCcCChHHHHHHHHHhhCccccccchHHHHHHHHhhHhhHHHHHHHHHHhhccCCCCccc
Q psy1297         165 VAPGERIKCLLQVQEGG-LSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIE  243 (427)
Q Consensus       165 ~~Pld~vk~r~q~~~~~-~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~~k~~~~~~~~~~~~  243 (427)
                      ++|+|+||+|+|++... ....|+++++++++|+++||++|||||+.|+++|.+|+.+++|.+||.+|+.+.+....   
T Consensus       122 ~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~---  198 (303)
T 2lck_A          122 AQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLM---  198 (303)
T ss_dssp             SCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSC---
T ss_pred             cCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---
Confidence            99999999999998642 34578999999999999999999999999999999999999999999999988654321   


Q ss_pred             ccccccCCCchHHHhhHHHHHHHHHHHhhccHHHHHHHhcCCCCCCCCCcHHHHHHHHhHhhcccccccc
Q psy1297         244 VSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEPAMYAAPYCL  313 (427)
Q Consensus       244 ~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~dvvk~r~q~~~~~~y~~~~~~~~~~i~~~~G~~g~~~~  313 (427)
                             ..+....+++|++||++++++++|+||||+|||++...+| +++++|+++++++||+.|||.+
T Consensus       199 -------~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y-~~~~~~~~~i~~~eG~~glyrG  260 (303)
T 2lck_A          199 -------TDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQY-HSAGHCALTMLRKEGPRAFYKG  260 (303)
T ss_dssp             -------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSC-CSHHHHHHHHHHSSCTHHHHSC
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccccc-CCHHHHHHHHHHHcChHHhhcc
Confidence                   1226788999999999999999999999999999987789 9999999999999999999943



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 427
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-13
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-06
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 66.3 bits (160), Expect = 8e-13
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 10/162 (6%)

Query: 145 LELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEG----GLSNVYSGPVDVIRKLIQQH 200
           L   + FL+G +   ++   VAP ER+K LLQVQ           Y G +D + ++ ++ 
Sbjct: 4   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 63

Query: 201 GLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITA 260
           G  S ++G  A ++R  P     +A  +  K +F G  D         +      G + +
Sbjct: 64  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD------RHKQFWRYFAGNLAS 117

Query: 261 GSMAGISYWIVAMPADVLKTRLQTAPEDKYPHGIRSVLSEML 302
           G  AG +      P D  +TRL             + L   +
Sbjct: 118 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI 159


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query427
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=4.9e-45  Score=340.54  Aligned_cols=256  Identities=18%  Similarity=0.280  Sum_probs=224.1

Q ss_pred             chhhHHhhhhhhcccccccchHHHHHHHhcCCCCCCCCcHHHHHHHHHhhhccccccCCchHHHHhHHHHHhHHHHHHHH
Q psy1297           5 GVDYVWSHLYISFPDFPAMPADVLKTRLQTAPEDKYPHGIRSVLSEMLEREGPRTLYRGATPVLLRAIPANAACFLGIEW   84 (427)
Q Consensus         5 ~~~~~~g~~a~~~~~~i~~Pld~iKtr~Q~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~~~~~~~~~~~~f~~~~~   84 (427)
                      ..+|++|++|++++.+++||||+||+|+|++...              +..+..+.|+|.                    
T Consensus         7 ~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~--------------~~~~~~~~~~~~--------------------   52 (292)
T d1okca_           7 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS--------------KQISAEKQYKGI--------------------   52 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGC--------------SSCCGGGSCCSH--------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCC--------------CCCCcccccCCH--------------------
Confidence            3579999999999999999999999999998753              122334667887                    


Q ss_pred             HHHHhhHHHHHHHHHHhhCccccccCchHhHhhhhhhhhHHHHHHHHHHHHhhccccCC---CchHHHHHHHHHHHHHHH
Q psy1297          85 TLQLLRMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMG---QLELWQYFLSGSLGGIVT  161 (427)
Q Consensus        85 ~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~ag~~~  161 (427)
                             ++++++++++||+++||||+.+.+++..+...++|..|+.+++.+.......   .......+++|++||+++
T Consensus        53 -------~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  125 (292)
T d1okca_          53 -------IDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATS  125 (292)
T ss_dssp             -------HHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhH
Confidence                   9999999999999999999999999999999999999999999987752222   234567788999999999


Q ss_pred             HHhhcHHHHHHHHHhcccCC--CCCCcCChHHHHHHHHHhhCccccccchHHHHHHHHhhHhhHHHHHHHHHHhhccCCC
Q psy1297         162 AALVAPGERIKCLLQVQEGG--LSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGD  239 (427)
Q Consensus       162 ~~~~~Pld~vk~r~q~~~~~--~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~~k~~~~~~~~  239 (427)
                      .++++|+|++|+|+|.+...  ....|.++.+++++++++||+++||+|+.++++|.+|+.+++|..||.+|+.+.+...
T Consensus       126 ~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~  205 (292)
T d1okca_         126 LCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN  205 (292)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGC
T ss_pred             HhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccccc
Confidence            99999999999999998653  4557889999999999999999999999999999999999999999999987654322


Q ss_pred             CcccccccccCCCchHHHhhHHHHHHHHHHHhhccHHHHHHHhcCCCCC-----CCCCcHHHHHHHHhHhhcccccccce
Q psy1297         240 SVIEVSDQTRKTTPLVGTITAGSMAGISYWIVAMPADVLKTRLQTAPED-----KYPHGIRSVLSEMLEPAMYAAPYCLS  314 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~P~dvvk~r~q~~~~~-----~y~~~~~~~~~~i~~~~G~~g~~~~~  314 (427)
                                  ......+++|+++++++++++||+||||+|||.+...     +| ++++|++++++++||+.|||.+.
T Consensus       206 ------------~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y-~~~~~~~~~i~~~eG~~~lyrG~  272 (292)
T d1okca_         206 ------------VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMY-TGTVDCWRKIAKDEGPKAFFKGA  272 (292)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSC-SSHHHHHHHHHHHHCGGGGGTTH
T ss_pred             ------------cchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCC-CCHHHHHHHHHHhcCcCcccccH
Confidence                        2277889999999999999999999999999998754     58 89999999999999999999654



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure