Psyllid ID: psy13052

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530---
Protein Sequence
MQTSRDESRTSSSQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTVY
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHcccccccEEEccccccEEEEccccccccccccccccccccccEEEEccccccHHHHHccccccEEEEEEccccccEEEEEEEEEcccccEEEEEEEEcccEEEEEEccccccccHHHHHHHHcccccccccccccccccccHHHHcccccEEEEEEEEEEEEEcccccHHHHcccccccHHHHHHHHHcccEEEccccccccccccccccccccEEEEEEEccEEEEEEEEcccccccccHHHHHHHHHccccEEEEEEEccccccccHHHHccccEEEEEEEEEccccccccEEEEEEEcccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEccccccEEEEccEEEEccccccccccccccccEEccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHcccccccEEEEcccccEEEEccccccccccccccccccccccEEEEEcccHHHHHHHHHcHHHHcEcccccccccEEEEEEEEcccccccEEEEEEEccccHHcccccccccccHHHHHHHHcHHHccccccccccccccHHHHHHccccEcccEEEEEEEEEcccccHHHHcccccccHHHHHHHHHHccEEEEccccccEccEEccccccccEEEEEEEcccEEEEEEEcccccccccHHHHHHHHcccccEEEEEEccccccccHHHHHHccEEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccccEEEEEEHHHHHcccccHHHHEEEEEEEEcccEEcccccHHHHEEccccccccEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEccc
Coil and Loop (DISEMBL)
mqtsrdesrtsssqhdknnSKELLEETlrgslpypmivtppsggywldgyenesrqnsnshqhgptapwrskiecddtaKCYRRFflgrehsnfvgvdnelgpvLLSTKTELVGNQSHTRLLLRLktgtvhellppncanaspQTMARLVNEQltcssltpvlcpqaSSLIAAYDEHVLVSQFKFGVLYqrhgqiteeelfankhtspaFDQFLNLLGQRIllkdhkgyrggldtqfRQTGEQAVYQVFKEREIMFHVstllpftendpqqLQRKRHIGNDIVAIVFQetntpfspdmiaSHFLHAFIVVQvidpntpntrykvsvtarddvpffgpnfpqpaifradsDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFlggegedtrhgdtsngsgtgtrfidtehsnfvgvdnelgpvLLSTKTELVGNQSHTRLLLRLktgtvhellppncanaspqTMARLRTRSSLLHSLCEELKEKTREFlggegedtrhgdtsngsgtgtrfidtvy
Flexible Loop (DISEMBL)
mqtsrdesrtsssqhdknnskELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSnshqhgptapwrskiecDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTReflggegedtrhgdtsngsgtgtRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKtgtvhellppncanaspqtMARLRTRSSLLHSLCEELKEKTReflggegedtrhgdtsngsgtgtrfidtvy
Low Complexity Region (SEG)
MQTSRDESRTSSSQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMArlrtrssllhslCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTVY
Disordered region (IsUnstruct)
*******************************LPYPMIVTPPSGGYWLDGY******************WRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCE*******************************FIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC************************************************************
Disordered Region (DISOPRED)
***********************LEETLRGSLPYPMIVTPPSGGYWLDGYENESR***********APWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVL***ASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEE*****************************************************************************************************************************************FIDTVY
Disordered Region (DISEMBL)
**********************LLEETLRGSLPYPMIVTPPSGGYWLDGYENE**************PWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTVY
Disordered Region (DISPRO)
*********TSSSQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYE***************APWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGE*********SNGSGTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLRTRSSLLHSLCEELKEKTREFLGG*****************TRFIDTVY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQTSRDESRTSSSQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQTMARLRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGTRFIDTVY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	533	2.2.26 [Sep-21-2011]
P47736	663	Rap1 GTPase-activating pr	yes	N/A	0.759	0.610	0.510	1e-113
Q5ZMV8	730	Rap1 GTPase-activating pr	no	N/A	0.759	0.554	0.498	1e-108
Q5SVL6	712	Rap1 GTPase-activating pr	no	N/A	0.904	0.676	0.431	1e-104
Q684P5	730	Rap1 GTPase-activating pr	no	N/A	0.759	0.554	0.485	1e-103
Q9P2F8	1722	Signal-induced proliferat	no	N/A	0.589	0.182	0.419	2e-66
Q80TE4	1722	Signal-induced proliferat	no	N/A	0.589	0.182	0.419	5e-66
O43166	1804	Signal-induced proliferat	no	N/A	0.590	0.174	0.419	3e-65
Q96FS4	1042	Signal-induced proliferat	no	N/A	0.589	0.301	0.443	4e-65
Q8C0T5	1782	Signal-induced proliferat	no	N/A	0.587	0.175	0.420	5e-65
P46062	1037	Signal-induced proliferat	no	N/A	0.587	0.301	0.440	8e-65

>sp|P47736|RPGP1_HUMAN Rap1 GTPase-activating protein 1 OS=Homo sapiens GN=RAP1GAP PE=1 SV=2

 Score =  409 bits (1052), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/415 (51%), Positives = 276/415 (66%), Gaps = 10/415 (2%)

Query: 1   MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
           MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct: 5   MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIT 64

Query: 56  QNSNSHQ-HGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
               +     PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct: 65  SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIG 122

Query: 115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
           +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct: 123 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 182

Query: 173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
            +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct: 183 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 242

Query: 233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
           LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct: 243 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 302

Query: 293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
           PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct: 303 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 362

Query: 353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTR 407
           EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++ +
Sbjct: 363 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDK 417

GTPase activator for the nuclear Ras-related regulatory protein RAP-1A (KREV-1), converting it to the putatively inactive GDP-bound state.
Homo sapiens (taxid: 9606)

>sp|Q5ZMV8|RPGP2_CHICK Rap1 GTPase-activating protein 2 OS=Gallus gallus GN=RAP1GAP2 PE=2 SV=2

 Score =  393 bits (1009), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/417 (49%), Positives = 270/417 (64%), Gaps = 12/417 (2%)

Query: 1   MQTSRDESRTSSSQHDKNNSKEL--LEETLRGSLPYPMIVTPPSGGYWLDGYEN------ 52
           MQ  + E + + SQ  K +      ++E L    PYP+++ P  GGYW++  EN      
Sbjct: 66  MQAPKLEDQKAGSQKHKEDYIPYPSIDEILEKGSPYPLVILPQFGGYWIEDPENLGTPTS 125

Query: 53  -ESRQNSNSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTE 111
            +S       ++   +P+  K+EC   A+ YR+ FLG++H NF    + LG ++LS K E
Sbjct: 126 SDSSVCEEEEENFSPSPYGYKLECKGEARAYRKHFLGKDHLNFYCTASSLGNLILSIKCE 185

Query: 112 LVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASS 169
            V    + R++LR K  T+HE +P    +  P    +A+   +  +     PVL P+AS 
Sbjct: 186 EVDGTEYLRIILRSKVKTLHERIPLAGFSKLPSIPQIAKAFCDDASGLKFNPVLYPKASQ 245

Query: 170 LIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGY 229
           +I AYDEH + + FKFGV+YQ+  Q  EEELF N   S AF  FLNLLG  I L+D KG+
Sbjct: 246 MIVAYDEHEVNNTFKFGVIYQKFRQTQEEELFGNNEESAAFRNFLNLLGDTITLQDFKGF 305

Query: 230 RGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQE 289
           RGGLD    QTG ++VY VF++REIMFHVST LPFTE D QQLQRKRHIGNDIVAI+FQE
Sbjct: 306 RGGLDVSHGQTGVESVYTVFRDREIMFHVSTKLPFTEGDTQQLQRKRHIGNDIVAIIFQE 365

Query: 290 TNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADS 349
            NTPF PDMIAS+FLHA+IVVQV +P+   T YKVSVTAR+DVP FGP  P P +F+   
Sbjct: 366 ENTPFVPDMIASNFLHAYIVVQVENPDADTTSYKVSVTAREDVPSFGPPLPSPPVFQKSP 425

Query: 350 DFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLG-GEGED 405
           +F+EFLLTKLINAENA  K+ KFAKLE RTR++LL +L +EL   T+  LG G  ED
Sbjct: 426 EFREFLLTKLINAENACCKSDKFAKLEDRTRAALLDNLHDELHGHTQTMLGLGPEED 482

GTPase activator for the nuclear Ras-related regulatory protein RAP-1A (KREV-1), converting it to the putatively inactive GDP-bound state.

Gallus gallus (taxid: 9031)

>sp|Q5SVL6|RPGP2_MOUSE Rap1 GTPase-activating protein 2 OS=Mus musculus GN=Rap1gap2 PE=1 SV=1

 Score =  379 bits (973), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/524 (43%), Positives = 299/524 (57%), Gaps = 42/524 (8%)

Query: 1   MQTSRDESRTSSSQHDKNNSKEL--LEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNS 58
           MQ  + E +    Q +K++      ++E +    PYP+I+ P  GGYW++  EN     S
Sbjct: 47  MQGIKLEEQRPGPQKNKDDYIPYPSIDEVVEKGGPYPLIILPQFGGYWIEDPENVGTPTS 106

Query: 59  ------NSHQHGPTAP--WRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKT 110
                    +    +P  +  K+EC   A+ YRR FLG++H NF    + LG ++LS K 
Sbjct: 107 LGSSVYEEEEEDSLSPNTFGYKLECRGEARAYRRHFLGKDHLNFYCTGSSLGNLILSIKC 166

Query: 111 ELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQAS 168
           E      + R++LR K  TVHE +P    +  P    +A+   +        PVL P+AS
Sbjct: 167 EEAEGMEYLRIILRSKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVGLKFNPVLYPKAS 226

Query: 169 SLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKG 228
            +I +YDEH + + FKFGV+YQ+  Q  EEELF N   SPAF +FL+LLG  I L+D KG
Sbjct: 227 QMIVSYDEHDVNNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKG 286

Query: 229 YRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQ 288
           +RGGLD    QTG ++VY  F++REIMFHVST LPFT+ D QQLQRKRHIGNDIVAI+FQ
Sbjct: 287 FRGGLDVTHGQTGVESVYTTFRDREIMFHVSTKLPFTDGDTQQLQRKRHIGNDIVAIIFQ 346

Query: 289 ETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRAD 348
           E NTPF PDMIAS+FLHA+IVVQ  +P T    YKVSVTAR+DVP FGP  P P +F+  
Sbjct: 347 EENTPFVPDMIASNFLHAYIVVQADNPGTETPSYKVSVTAREDVPAFGPPLPSPPVFQKG 406

Query: 349 SDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLG-GEGEDTR 407
           ++F+EFLLTKL NAENA  K+ KFAKLE RTR++LL +L +EL   T+  LG G  ED  
Sbjct: 407 AEFREFLLTKLTNAENACCKSDKFAKLEDRTRAALLDNLHDELHTHTQVMLGMGPEED-- 464

Query: 408 HGDTSNGSGTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHT---RLLLRLKTGT 464
                       +F +  H  F+        V   +   +VG+Q       L   L  G 
Sbjct: 465 ------------KFENGGHGGFLESFKRAIRVRSHSMETMVGSQRKLHGGNLPGSLSGGI 512

Query: 465 VHELL---------PPNCANASPQTMARLRTRSSL---LHSLCE 496
           VH  +         P   A A  Q+ + ++ RS L   LHS  E
Sbjct: 513 VHNSMEVTKTTFSPPVAAATAKNQSRSPIKRRSGLFPRLHSGSE 556

GTPase activator for the nuclear Ras-related regulatory protein RAP-1A (KREV-1), converting it to the putatively inactive GDP-bound state.

Mus musculus (taxid: 10090)

>sp|Q684P5|RPGP2_HUMAN Rap1 GTPase-activating protein 2 OS=Homo sapiens GN=RAP1GAP2 PE=1 SV=2

 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/418 (48%), Positives = 263/418 (62%), Gaps = 13/418 (3%)

Query: 1   MQTSRDESRTSSSQHDKNNSKEL--LEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNS 58
           MQ  + E +    Q +K++      ++E +    PYP ++ P  GGYW++  EN     S
Sbjct: 66  MQGIKLEEQKPGPQKNKDDYIPYPSIDEVVEKGGPYPQVILPQFGGYWIEDPENVGTPTS 125

Query: 59  ------NSHQHGPTAP--WRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKT 110
                    +    +P  +  K+EC   A+ YRR FLG++H NF    + LG ++LS K 
Sbjct: 126 LGSSICEEEEEDNLSPNTFGYKLECKGEARAYRRHFLGKDHLNFYCTGSSLGNLILSVKC 185

Query: 111 ELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQAS 168
           E      + R++LR K  TVHE +P    +  P    +A+   +        PVL P+AS
Sbjct: 186 EEAEGIEYLRVILRSKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVGLRFNPVLYPKAS 245

Query: 169 SLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKG 228
            +I +YDEH + + FKFGV+YQ+  Q  EEELF N   SPAF +FL+LLG  I L+D KG
Sbjct: 246 QMIVSYDEHEVNNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKG 305

Query: 229 YRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQ 288
           +RGGLD    QTG ++VY  F++REIMFHVST LPFT+ D QQLQRKRHIGNDIVAI+FQ
Sbjct: 306 FRGGLDVTHGQTGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQ 365

Query: 289 ETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRAD 348
           E NTPF PDMIAS+FLHA+IVVQV  P T    YKVSVTAR+DVP FGP  P P +F+  
Sbjct: 366 EENTPFVPDMIASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKG 425

Query: 349 SDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLG-GEGED 405
            +F+EFLLTKL NAENA  K+ KFAKLE RTR++LL +L +EL   T+  LG G  ED
Sbjct: 426 PEFREFLLTKLTNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEED 483

GTPase activator for the nuclear Ras-related regulatory protein RAP-1A (KREV-1), converting it to the putatively inactive GDP-bound state.

Homo sapiens (taxid: 9606)

>sp|Q9P2F8|SI1L2_HUMAN Signal-induced proliferation-associated 1-like protein 2 OS=Homo sapiens GN=SIPA1L2 PE=1 SV=2

 Score =  253 bits (647), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/334 (41%), Positives = 192/334 (57%), Gaps = 20/334 (5%)

Query: 76  DDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELV-------GNQSHTRLLLR---- 124
           D  A  YR+FF G+EH N+ G+D  LGPV +S + E V       G+Q + R+  R    
Sbjct: 481 DLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSIRREKVEDAKEKEGSQFNYRVAFRTSEL 540

Query: 125 --LKTGTVHELLPPNCANASPQTMA-----RLVNEQLTCSSLTPVL-CPQASSLIAAYDE 176
             L+   + + +P    + + + +        V  +L+   L      P+ S  +   DE
Sbjct: 541 TTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASNSPKVSEQLLKLDE 600

Query: 177 HVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQ 236
             L  Q K G+LY + GQ TEEE++ N+   PAF++FL+LLGQR+ LK    YR  LD +
Sbjct: 601 QGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNK 660

Query: 237 FRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT-PFS 295
              TG  ++Y  +K+ E+MFHVSTLLP+  N+ QQL RKRHIGNDIV IVFQE    PF+
Sbjct: 661 TDSTGTHSLYTTYKDYELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFT 720

Query: 296 PDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFL 355
           P  I SHF H F++V+V +P T N  Y V V+   DVP FGP  P+   F   + F++FL
Sbjct: 721 PKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFL 780

Query: 356 LTKLINAENAAYKAHKFAKLELRTRSSLLHSLCE 389
           L K+INAENAA+K+ KF  +  RTR   L  L E
Sbjct: 781 LAKVINAENAAHKSEKFRAMATRTRQEYLKDLAE 814

Homo sapiens (taxid: 9606)

>sp|Q80TE4|SI1L2_MOUSE Signal-induced proliferation-associated 1-like protein 2 OS=Mus musculus GN=Sipa1l2 PE=1 SV=3

 Score =  252 bits (644), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/334 (41%), Positives = 191/334 (57%), Gaps = 20/334 (5%)

Query: 76  DDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELV-------GNQSHTRLLLR---- 124
           D  A  YR+FF G+EH N+ G+D  LGPV +S + E V       G+Q + R+  R    
Sbjct: 482 DLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSIRREKVEDPREKEGSQFNYRVAFRTSEL 541

Query: 125 --LKTGTVHELLPPNCANASPQTMA-----RLVNEQLTCSSLTPVL-CPQASSLIAAYDE 176
             L+   + + +P    + + + +        V  +L+   L      P+    +   DE
Sbjct: 542 TTLRGAILEDAVPSTARHGTARGLPLKEVLEYVIPELSIQCLRQAANSPKVPEQLLKLDE 601

Query: 177 HVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQ 236
             L  Q K G+LY R GQ TEEE++ N+   PAF++FL+LLGQR+ LK    YR  LD +
Sbjct: 602 QGLSFQHKIGILYCRAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNK 661

Query: 237 FRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT-PFS 295
              TG  ++Y  +K+ E+MFHVSTLLP+  N+ QQL RKRHIGNDIV IVFQE    PF+
Sbjct: 662 TDSTGTHSLYTTYKDFELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFT 721

Query: 296 PDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFL 355
           P  I SHF H F++V+V +P T N  Y V V+   DVP FGP  P+   F   + F++FL
Sbjct: 722 PKNIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFL 781

Query: 356 LTKLINAENAAYKAHKFAKLELRTRSSLLHSLCE 389
           L K+INAENAA+K+ KF  +  RTR   L  L E
Sbjct: 782 LAKVINAENAAHKSEKFRAMATRTRQEYLKDLAE 815

Mus musculus (taxid: 10090)

>sp|O43166|SI1L1_HUMAN Signal-induced proliferation-associated 1-like protein 1 OS=Homo sapiens GN=SIPA1L1 PE=1 SV=4

 Score =  249 bits (636), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/336 (41%), Positives = 194/336 (57%), Gaps = 21/336 (6%)

Query: 75  CDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELV------GNQSHTRLLLRLKT- 127
            D  A  YR+FF  +EH N+ G D  LGPV +S + E        G+  + R++ R    
Sbjct: 485 VDLGAYYYRKFFYQKEHWNYFGADENLGPVAVSIRREKPDEMKENGSPYNYRIIFRTSEL 544

Query: 128 ----GTVHELLPPNCANAS-------PQTMARLVNE-QLTCSSLTPVLCPQASSLIAAYD 175
               G+V E   P+ A  S        + +  +V E  + C  L     P+ +  +   D
Sbjct: 545 MTLRGSVLEDAIPSTAKHSTARGLPLKEVLEHVVPELNVQCLRLA-FNTPKVTEQLMKLD 603

Query: 176 EHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDT 235
           E  L  Q K G++Y + GQ TEEE++ N+   PAF++FL LLG+R+ LK  + YR  LDT
Sbjct: 604 EQGLNYQQKVGIMYCKAGQSTEEEMYNNESAGPAFEEFLQLLGERVRLKGFEKYRAQLDT 663

Query: 236 QFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT-PF 294
           +   TG  ++Y  +K+ EIMFHVST+LP+T N+ QQL RKRHIGNDIV IVFQE    PF
Sbjct: 664 KTDSTGTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEPGAQPF 723

Query: 295 SPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEF 354
           SP  I SHF H F++V+V +P + +  Y V+VT   DVP FGP  P+   F   + F++F
Sbjct: 724 SPKNIRSHFQHVFVIVRVHNPCSDSVCYSVAVTRSRDVPSFGPPIPKGVTFPKSNVFRDF 783

Query: 355 LLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEE 390
           LL K+INAENAA+K+ KF  +  RTR   L  L E+
Sbjct: 784 LLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAEK 819

Stimulates the GTPase activity of RAP2A. Promotes reorganization of the actin cytoskeleton and recruits DLG4 to F-actin. Contributes to the regulation of dendritic spine morphogenesis.

Homo sapiens (taxid: 9606)

>sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1

 Score =  249 bits (636), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 192/329 (58%), Gaps = 15/329 (4%)

Query: 75  CDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELV----GNQSHT-RLLLR---LK 126
            D  A  YR++F G+EH NF G+D  LGPV +S + E      G   H+ R+++R   L+
Sbjct: 212 ADLGAGYYRKYFYGKEHQNFFGMDESLGPVAVSLRREEKEGSGGGTLHSYRVIVRTTQLR 271

Query: 127 T--GTVHE-LLPPNCANA-SPQTMARLVNEQLTCSSL-TPVLCPQASSLIAAYDEHVLVS 181
           T  GT+ E  LPP      SP+ +   V  QL+ S L      P+    +   DE VL  
Sbjct: 272 TLRGTISEDALPPGPPRGLSPRKLLEHVAPQLSPSCLRLGSASPKVPRTLLTLDEQVLSF 331

Query: 182 QFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTG 241
           Q K G+LY R GQ +EEE++ N+   PAF QFL LLG  + LK  + YR  LDT+   TG
Sbjct: 332 QRKVGILYCRAGQGSEEEMYNNQEAGPAFMQFLTLLGDVVRLKGFESYRAQLDTKTDSTG 391

Query: 242 EQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT-PFSPDMIA 300
             ++Y  +++ EIMFHVST+LP+T N+ QQL RKRHIGNDIV IVFQE  + PF P  I 
Sbjct: 392 THSLYTTYQDHEIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVFQEPGSKPFCPTTIR 451

Query: 301 SHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQ-PAIFRADSDFKEFLLTKL 359
           SHF H F+VV+   P TP+T Y+V+V+   D P FGP  P     F A++DF+ FLL K 
Sbjct: 452 SHFQHVFLVVRAHTPCTPHTTYRVAVSRTQDTPAFGPALPAGGGPFAANADFRAFLLAKA 511

Query: 360 INAENAAYKAHKFAKLELRTRSSLLHSLC 388
           +N E AA  A +F  +  RTR   L  L 
Sbjct: 512 LNGEQAAGHARQFHAMATRTRQQYLQDLA 540

GTPase activator for the nuclear Ras-related regulatory proteins Rap1 and Rap2 in vitro, converting it to the putatively inactive GDP-bound state.

Homo sapiens (taxid: 9606)

>sp|Q8C0T5|SI1L1_MOUSE Signal-induced proliferation-associated 1-like protein 1 OS=Mus musculus GN=Sipa1l1 PE=1 SV=2

 Score =  249 bits (635), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/338 (42%), Positives = 193/338 (57%), Gaps = 25/338 (7%)

Query: 75  CDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELV------GNQSHTRLLLRLKT- 127
            D  A  YR+FF  +EH N+ G D  LGPV +S + E        G+  + R++ R    
Sbjct: 485 VDLGAYYYRKFFYQKEHWNYFGADENLGPVAVSIRREKPEDMKENGSPYNYRIIFRTSEL 544

Query: 128 ----GTVHELLPPNCANASPQTMARLVNEQLTCSSLTP---VLC-------PQASSLIAA 173
               G+V E   P+ A  S    AR +  +     + P   V C       P+ +  +  
Sbjct: 545 MTLRGSVLEDAIPSTAKHS---TARGLPLKEVLEHVIPELNVQCLRLAFNTPKVTEQLMK 601

Query: 174 YDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGL 233
            DE  L  Q K G++Y + GQ TEEE++ N+   PAF++FL LLG+R+ LK  + YR  L
Sbjct: 602 LDEQGLNYQQKVGIMYCKAGQSTEEEMYNNESAGPAFEEFLQLLGERVRLKGFEKYRAQL 661

Query: 234 DTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT- 292
           DT+   TG  ++Y  +K+ EIMFHVST+LP+T N+ QQL RKRHIGNDIV IVFQE    
Sbjct: 662 DTKTDSTGTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEPGAQ 721

Query: 293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
           PFSP  I SHF H F++V+  +P T +  Y V+VT   DVP FGP  P+   F   + F+
Sbjct: 722 PFSPKNIRSHFQHVFVIVRAHNPCTESVCYSVAVTRSRDVPSFGPPIPKGVTFPKSNVFR 781

Query: 353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEE 390
           +FLL K+INAENAA+K+ KF  +  RTR   L  L E+
Sbjct: 782 DFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAEK 819

Stimulates the GTPase activity of RAP2A. Promotes reorganization of the actin cytoskeleton and recruits DLG4 to F-actin. Contributes to the regulation of dendritic spine morphogenesis.

Mus musculus (taxid: 10090)

>sp|P46062|SIPA1_MOUSE Signal-induced proliferation-associated protein 1 OS=Mus musculus GN=Sipa1 PE=2 SV=2

 Score =  248 bits (633), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 193/329 (58%), Gaps = 16/329 (4%)

Query: 75  CDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELV----GNQSHT-RLLLR---LK 126
            D  A  YR++F G+EH NF G+D  LGPV +S + E      G   H+ R+++R   L+
Sbjct: 208 ADLGAGYYRKYFYGKEHQNFFGLDEALGPVAVSLRREEKEGSGGGTLHSYRVIVRTTQLR 267

Query: 127 T--GTVHE-LLPPNCANASPQTMARLVNEQL--TCSSLTPVLCPQASSLIAAYDEHVLVS 181
           T  GT+ E  LPP   + SP+ +   V  +L  TC  L     P+    +   DE VL  
Sbjct: 268 TLRGTISEDALPPGPPSVSPRKLLEHVAPRLSPTCLRLGSA-SPKVPRQLLTLDEQVLSF 326

Query: 182 QFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTG 241
           Q K G+LY R GQ +EEE++ N+    AF QFL LLG  + LK  + YR  LDT+   TG
Sbjct: 327 QRKGGILYCRAGQGSEEEMYNNQEAGAAFMQFLTLLGDVVRLKGFESYRAQLDTKTDSTG 386

Query: 242 EQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT-PFSPDMIA 300
             ++Y  +++ EIMFHVST+LP+T N+ QQL RKRHIGNDIV IVFQE  + PF P  I 
Sbjct: 387 THSLYTTYQDHEIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVFQEPGSKPFCPTTIR 446

Query: 301 SHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQ-PAIFRADSDFKEFLLTKL 359
           SHF H F+VV+   P TP+T Y+V+V+   D P FGP  P+    F A++DF+ FLL K 
Sbjct: 447 SHFQHVFLVVRAHAPCTPHTSYRVAVSRTQDTPAFGPALPEGGGPFAANADFRAFLLAKA 506

Query: 360 INAENAAYKAHKFAKLELRTRSSLLHSLC 388
           +N E AA  A +F  +  RTR   L  L 
Sbjct: 507 LNGEQAAGHARQFHAMATRTRQQYLQDLA 535

GTPase activator for the nuclear Ras-related regulatory protein Rap1, Rsr1 and Ran in vitro, converting it to the putatively inactive GDP-bound state. Affects cell cycle progression.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	533
328710236	720	PREDICTED: rap1 GTPase-activating protei	0.864	0.640	0.638	1e-171
198473808	1029	GA25836 [Drosophila pseudoobscura pseudo	0.759	0.393	0.676	1e-165
194762284	856	GF14020 [Drosophila ananassae] gi|190616	0.759	0.473	0.679	1e-164
161076782	933	Rapgap1, isoform D [Drosophila melanogas	0.759	0.434	0.670	1e-164
442626615	959	Rapgap1, isoform H [Drosophila melanogas	0.759	0.422	0.670	1e-164
62471623	876	Rapgap1, isoform F [Drosophila melanogas	0.759	0.462	0.670	1e-164
195338941	849	GM13529 [Drosophila sechellia] gi|194129	0.759	0.477	0.679	1e-163
2655096	850	GTPase activating protein for Rap1 [Dros	0.759	0.476	0.670	1e-163
195117596	844	GI23099 [Drosophila mojavensis] gi|19391	0.759	0.479	0.677	1e-163
62471621	850	Rapgap1, isoform E [Drosophila melanogas	0.759	0.476	0.670	1e-163

>gi|328710236|ref|XP_001943000.2| PREDICTED: rap1 GTPase-activating protein 1-like [Acyrthosiphon pisum]

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/470 (63%), Positives = 362/470 (77%), Gaps = 9/470 (1%)

Query: 2   QTSRDESRTSS---SQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNS 58
           QTSRDE RTSS    +   N S+ELLEETL+G  PYP IV P  GG+W+DG +    + +
Sbjct: 64  QTSRDE-RTSSVPTPEAIGNGSRELLEETLKGPKPYPNIVLPTGGGFWIDGQDQNEYEPA 122

Query: 59  NSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSH 118
            S   G    W +KIE DDTAK YRR+++GREH NFVG D++LGPVLLS KTE + +Q  
Sbjct: 123 ASS--GGACTWNNKIETDDTAKAYRRYYMGREHFNFVGTDDQLGPVLLSVKTESLASQEQ 180

Query: 119 TRLLLRLKTGTVHELLPPNCANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHV 178
           TRLLLRL+TGT HEL+P +CA ++P  MARL+N+QL+ ++++PVL  + S LIAAYDEHV
Sbjct: 181 TRLLLRLRTGTTHELVPSSCATSAPHHMARLLNDQLSVTNMSPVLSCKTSQLIAAYDEHV 240

Query: 179 LVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFR 238
           LVS FKFGVLYQ++GQ +EEELF+N+HTSPAFDQFL LLGQRI LKDHKGYRGGLDTQF 
Sbjct: 241 LVSHFKFGVLYQKYGQTSEEELFSNQHTSPAFDQFLQLLGQRIQLKDHKGYRGGLDTQFG 300

Query: 239 QTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDM 298
           QTG++AVYQVFK+REI+FHVS+LLP+T+NDPQQLQRKRHIGNDIVAIVFQE+NTPF+PDM
Sbjct: 301 QTGDEAVYQVFKDREIIFHVSSLLPYTDNDPQQLQRKRHIGNDIVAIVFQESNTPFTPDM 360

Query: 299 IASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTK 358
           IASHFLHA+I+VQVI+PNTPN RYKVSVTARDDVPFFGP  P PA+FR   DFK+FLLTK
Sbjct: 361 IASHFLHAYIIVQVIEPNTPNVRYKVSVTARDDVPFFGPTLPNPAVFRHGPDFKQFLLTK 420

Query: 359 LINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLG---GEGEDTRHGDTSNGS 415
           L+NAENA YKAHKFAKLELRTR+SLLHSLCEELK+KT++FLG   G    T  G      
Sbjct: 421 LVNAENACYKAHKFAKLELRTRTSLLHSLCEELKDKTKDFLGHNEGGSTGTNAGAAGTSG 480

Query: 416 GTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTV 465
           G G     +  ++     +E G   +S       +     L+ R+KT T+
Sbjct: 481 GLGAELTKSSAASSSSSSSECGNGTISGAGSRFIDTVRKALIARVKTQTL 530

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198473808|ref|XP_002132558.1| GA25836 [Drosophila pseudoobscura pseudoobscura] gi|198138117|gb|EDY69960.1| GA25836 [Drosophila pseudoobscura pseudoobscura]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 282/417 (67%), Positives = 325/417 (77%), Gaps = 12/417 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLE+ L  + PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 348 SQRLLEDALAKAAPYPMILLPLHGGYWMDGTEHECSYDARGNPLLPQTTWMAKFETDDTA 407

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN VG D +LGPVL+S KTE V NQ H R+LLRL+TGT+HEL+P +C 
Sbjct: 408 KCYRRFYAAREHSNLVGQDEQLGPVLISIKTENVANQEHMRILLRLRTGTMHELIPVSCL 467

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
            A  SP  M RL+NEQ+   +  PVLCP+AS+LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 468 GAQPSPAKMVRLLNEQIQVDNFMPVLCPKASNLISVYDEHVLVSHFKFGVLYQRYGQTTE 527

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKERE+MFH
Sbjct: 528 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREVMFH 587

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ ++PNT
Sbjct: 588 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPLEPNT 647

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLEL
Sbjct: 648 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEL 707

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHG----------DTSNGSGTGTRFIDT 424
           RTR+SLL +L EEL+EKTR+FLG +   T  G            S G   GTRFIDT
Sbjct: 708 RTRTSLLQNLVEELREKTRDFLGADLLQTTAGSPTPETPKAESASGGGNAGTRFIDT 764

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194762284|ref|XP_001963281.1| GF14020 [Drosophila ananassae] gi|190616978|gb|EDV32502.1| GF14020 [Drosophila ananassae]

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/415 (67%), Positives = 321/415 (77%), Gaps = 10/415 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L  + PYPMI+ P  GGYWLDG E+E   ++  +   P   W +K E DDTA
Sbjct: 172 SQRLLEEALAKTAPYPMILLPLHGGYWLDGTEHECAYDARGNPILPQTTWMAKFETDDTA 231

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN VG D +LGPVL+S KTE V NQ H R+LLRL+TGT+HEL+P +C 
Sbjct: 232 KCYRRFYAAREHSNLVGQDEQLGPVLISIKTENVANQEHMRILLRLRTGTMHELIPVSCL 291

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
            A  SP  M RL+NEQ+   +  PVLCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 292 GAQPSPAKMVRLLNEQIQVENFMPVLCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 351

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 352 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 411

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 412 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 471

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+ RYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 472 PHARYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 531

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHGD--------TSNGSGTGTRFIDT 424
           RTR+SLL +L EEL+EKTR+FLG +      G          S G   G+RFIDT
Sbjct: 532 RTRTSLLQNLVEELREKTRDFLGNDLSQATAGSPTPETPKAESGGGNAGSRFIDT 586

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161076782|ref|NP_652556.2| Rapgap1, isoform D [Drosophila melanogaster] gi|442626617|ref|NP_001260208.1| Rapgap1, isoform I [Drosophila melanogaster] gi|157400105|gb|AAF52528.2| Rapgap1, isoform D [Drosophila melanogaster] gi|440213512|gb|AGB92744.1| Rapgap1, isoform I [Drosophila melanogaster]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/416 (67%), Positives = 323/416 (77%), Gaps = 11/416 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 251 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 310

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN +G+D +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct: 311 KCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 370

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
               SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 371 LPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 430

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 431 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 490

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 491 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 550

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 551 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 610

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHG---------DTSNGSGTGTRFIDT 424
           RTR+SLL +LCEEL+EKTR+FLG +   T  G         ++ +G   G+RFIDT
Sbjct: 611 RTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDT 666

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442626615|ref|NP_001097114.2| Rapgap1, isoform H [Drosophila melanogaster] gi|440213511|gb|ABV53642.2| Rapgap1, isoform H [Drosophila melanogaster]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/416 (67%), Positives = 323/416 (77%), Gaps = 11/416 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 277 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 336

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN +G+D +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct: 337 KCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 396

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
               SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 397 LPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 456

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 457 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 516

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 517 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 576

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 577 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 636

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHG---------DTSNGSGTGTRFIDT 424
           RTR+SLL +LCEEL+EKTR+FLG +   T  G         ++ +G   G+RFIDT
Sbjct: 637 RTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDT 692

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62471623|ref|NP_001014479.1| Rapgap1, isoform F [Drosophila melanogaster] gi|61678292|gb|AAX52662.1| Rapgap1, isoform F [Drosophila melanogaster]

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/416 (67%), Positives = 323/416 (77%), Gaps = 11/416 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 194 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 253

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN +G+D +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct: 254 KCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 313

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
               SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 314 LPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 373

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 374 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 433

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 434 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 493

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 494 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 553

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHG---------DTSNGSGTGTRFIDT 424
           RTR+SLL +LCEEL+EKTR+FLG +   T  G         ++ +G   G+RFIDT
Sbjct: 554 RTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDT 609

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195338941|ref|XP_002036080.1| GM13529 [Drosophila sechellia] gi|194129960|gb|EDW52003.1| GM13529 [Drosophila sechellia]

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/415 (67%), Positives = 324/415 (78%), Gaps = 10/415 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 168 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 227

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN +GVD +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct: 228 KCYRRFYAAREHSNLIGVDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 287

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
               SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 288 LPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 347

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 348 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 407

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 408 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 467

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 468 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 527

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS-------NGSG-TGTRFIDT 424
           RTR+SLL +LCEEL+EKTR+FLG +   T  G  +       +GSG  G+RFIDT
Sbjct: 528 RTRTSLLQNLCEELREKTRDFLGTDLTQTSAGSPTPETPKAESGSGNAGSRFIDT 582

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|2655096|gb|AAB87873.1| GTPase activating protein for Rap1 [Drosophila melanogaster]

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/416 (67%), Positives = 323/416 (77%), Gaps = 11/416 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 168 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 227

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN +G+D +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct: 228 KCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 287

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
               SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 288 LPQPSPAKMAHTLNENITVDHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 347

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 348 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 407

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 408 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 467

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 468 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 527

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHG---------DTSNGSGTGTRFIDT 424
           RTR+SLL +LCEEL+EKTR+FLG +   T  G         ++ +G   G+RFIDT
Sbjct: 528 RTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDT 583

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195117596|ref|XP_002003333.1| GI23099 [Drosophila mojavensis] gi|193913908|gb|EDW12775.1| GI23099 [Drosophila mojavensis]

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/418 (67%), Positives = 323/418 (77%), Gaps = 13/418 (3%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYWLDG E+E   ++  +   P   W +K E DDTA
Sbjct: 156 SQRLLEEALAKPAPYPMILLPVHGGYWLDGTEHECSYDARGNPQLPQTTWMAKFEMDDTA 215

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN VG D +LGPVL+S KTE V NQ H R+LLRL+TGT+HEL+P +C 
Sbjct: 216 KCYRRFYAAREHSNLVGHDEQLGPVLISIKTENVANQEHMRILLRLRTGTMHELIPVSCL 275

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
            A  SP  M RL+NEQ+   +  PVLCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 276 GAQPSPAKMVRLLNEQIQVDNFMPVLCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 335

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAF++FL+++GQRI LKDHKGYRGGLD Q   TG+ AVY+VFKERE+MFH
Sbjct: 336 EELFGNQQTSPAFEEFLDVIGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREVMFH 395

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ ++PNT
Sbjct: 396 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPLEPNT 455

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEFLLTKLINAENA YKA KFAKLEL
Sbjct: 456 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGLEFKEFLLTKLINAENACYKAEKFAKLEL 515

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS-----------NGSGTGTRFIDT 424
           RTR+SLL +L EELKEKTR+FLG +   T  G  +            G   GTRFIDT
Sbjct: 516 RTRTSLLQNLVEELKEKTRDFLGADLSQTLAGSPTPETPKSESGGGGGGNAGTRFIDT 573

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62471621|ref|NP_001014478.1| Rapgap1, isoform E [Drosophila melanogaster] gi|7297262|gb|AAF52526.1| Rapgap1, isoform E [Drosophila melanogaster]

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/416 (67%), Positives = 323/416 (77%), Gaps = 11/416 (2%)

Query: 20  SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
           S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct: 168 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 227

Query: 80  KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC- 138
           KCYRRF+  REHSN +G+D +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct: 228 KCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 287

Query: 139 -ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
               SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct: 288 LPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 347

Query: 198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
           EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct: 348 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 407

Query: 258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
           VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct: 408 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 467

Query: 318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
           P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct: 468 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 527

Query: 378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHG---------DTSNGSGTGTRFIDT 424
           RTR+SLL +LCEEL+EKTR+FLG +   T  G         ++ +G   G+RFIDT
Sbjct: 528 RTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDT 583

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	533
FB|FBgn0264895	933	RapGAP1 "Rap GTPase activating	0.759	0.434	0.675	1e-148
ZFIN|ZDB-GENE-080402-9	704	rap1gap "RAP1 GTPase activatin	0.780	0.590	0.516	1.9e-110
UNIPROTKB|F1LV89	704	Rap1gap "Protein Rap1gap" [Rat	0.780	0.590	0.512	4.4e-109
WB|WBGene00018734	811	F53A10.2 [Caenorhabditis elega	0.816	0.536	0.484	4.9e-108
UNIPROTKB|H2L055	811	F53A10.2 "Protein F53A10.2, is	0.816	0.536	0.484	4.9e-108
UNIPROTKB|F2Z357	602	RAP1GAP "Rap1 GTPase-activatin	0.780	0.691	0.508	6.4e-108
UNIPROTKB|G3V1A7	617	RAP1GAP "RAP1, GTPase activati	0.780	0.674	0.508	6.4e-108
UNIPROTKB|J3KPC5	694	RAP1GAP "Rap1 GTPase-activatin	0.780	0.599	0.508	6.4e-108
UNIPROTKB|J3QSS6	727	RAP1GAP "Rap1 GTPase-activatin	0.780	0.572	0.508	6.4e-108
UNIPROTKB|P47736	663	RAP1GAP "Rap1 GTPase-activatin	0.780	0.627	0.508	6.4e-108

FB|FBgn0264895 RapGAP1 "Rap GTPase activating protein 1" [Drosophila melanogaster (taxid:7227)]

 Score = 1452 (516.2 bits), Expect = 1.0e-148, P = 1.0e-148
 Identities = 281/416 (67%), Positives = 324/416 (77%)

Query:    20 SKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSHQHGPTAPWRSKIECDDTA 79
             S+ LLEE L    PYPMI+ P  GGYW+DG E+E   ++  +   P   W +K E DDTA
Sbjct:   251 SQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTA 310

Query:    80 KCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCA 139
             KCYRRF+  REHSN +G+D +LGP+LLS KTE V NQ H R+L+RL+TGT+HELLP +C 
Sbjct:   311 KCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCL 370

Query:   140 --NASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITE 197
                 SP  MA  +NE +T     P+LCP+AS LI+ YDEHVLVS FKFGVLYQR+GQ TE
Sbjct:   371 LPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTE 430

Query:   198 EELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFH 257
             EELF N+ TSPAFD+FL++LGQRI LKDHKGYRGGLD Q   TG+ AVY+VFKEREIMFH
Sbjct:   431 EELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFH 490

Query:   258 VSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNT 317
             VSTLLP TE DPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ I+PNT
Sbjct:   491 VSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 550

Query:   318 PNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLEL 377
             P+TRYKVSVTARDDVPFFGP  P PA+FR   +FKEF+LTKLINAENA YKA KFAKLE 
Sbjct:   551 PHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQ 610

Query:   378 RTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS-------NGSG--TGTRFIDT 424
             RTR+SLL +LCEEL+EKTR+FLG +   T  G  +       +GSG   G+RFIDT
Sbjct:   611 RTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDT 666

GO:0046582 "Rap GTPase activator activity" evidence=IDA

GO:0032861 "activation of Rap GTPase activity" evidence=IDA

GO:0007265 "Ras protein signal transduction" evidence=ISS

GO:0005099 "Ras GTPase activator activity" evidence=ISS

GO:0002121 "inter-male aggressive behavior" evidence=IMP

ZFIN|ZDB-GENE-080402-9 rap1gap "RAP1 GTPase activating protein" [Danio rerio (taxid:7955)]

 Score = 1074 (383.1 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
 Identities = 220/426 (51%), Positives = 286/426 (67%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
             MQ++R DE R +     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct:     5 MQSNRMDEQRCTFPPPLKTEEDYIPYPSVHEVLGRKSPFPLILLPQFGGYWIEGTNHELS 64

Query:    56 QNSNSHQH-GPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
               ++  Q   PT+  R K+EC+ TAK YR+ FLG+EH N+  VD+ LG ++ S K +++G
Sbjct:    65 NGNDPEQFVSPTS--RYKLECNTTAKIYRKHFLGKEHFNYYTVDSALGHLVFSMKYDVIG 122

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RL+LR K  T H+++P +C    P    MA+LV E++      PVL P+AS LI 
Sbjct:   123 DQEHLRLMLRTKMKTHHDVIPISCLTEFPNIVQMAKLVCEEVNVDRFFPVLYPKASRLIV 182

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF N    PAF +FL  LGQ+I L D KG+RGG
Sbjct:   183 TFDEHVISNNFKFGVIYQKFGQTSEEELFGNNEEGPAFVEFLEFLGQKIELHDFKGFRGG 242

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F  +EIMFHVST LP+TE D QQLQRKRHIGNDIVAIVFQE NT
Sbjct:   243 LDVTHGQTGSESVYHNFHNKEIMFHVSTKLPYTEGDTQQLQRKRHIGNDIVAIVFQEENT 302

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQV +  + +  YKVSVTARDDVPFFGP  P PA+F+   +F 
Sbjct:   303 PFVPDMIASNFLHAYVVVQVENACSDDVLYKVSVTARDDVPFFGPPLPNPAVFKKGPEFH 362

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLL+KLINAE A YKA KFAKLE RTRS+LL +L EEL   ++  +G  GE+ +  +  
Sbjct:   363 EFLLSKLINAEYACYKAEKFAKLEERTRSALLETLYEELHINSQAMMGLGGEEDKLENGG 422

Query:   413 NGSGTG 418
              G G G
Sbjct:   423 GGGGGG 428

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0030695 "GTPase regulator activity" evidence=IEA

UNIPROTKB|F1LV89 Rap1gap "Protein Rap1gap" [Rattus norvegicus (taxid:10116)]

 Score = 1057 (377.1 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
 Identities = 220/429 (51%), Positives = 282/429 (65%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENE-S 54
             MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E S
Sbjct:    46 MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIS 105

Query:    55 RQNSNSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
                       PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct:   106 SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIG 163

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct:   164 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 223

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct:   224 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 283

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct:   284 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 343

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct:   344 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 403

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G+D +     
Sbjct:   404 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDDDK---ME 460

Query:   413 NGSGTGTRF 421
             NGSG G  F
Sbjct:   461 NGSGGGGFF 469

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

WB|WBGene00018734 F53A10.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
 Identities = 218/450 (48%), Positives = 285/450 (63%)

Query:     2 QTSRDESRTSSSQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSH 61
             Q  +   +T+ S      ++ ++ E L    PYP IV P S G+W+DG   +   +   +
Sbjct:   182 QNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLP-SNGFWMDGVNQQHHMDDQVN 240

Query:    62 QHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRL 121
                  +  R K+E D+T+ CYRR F GREH +F   D  +GP++LS +TE++ +  H R+
Sbjct:   241 NMNVNSCARFKLETDETSHCYRRHFFGREHHDFFANDPIVGPLVLSVRTEVISSCDHFRI 300

Query:   122 LLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVL 179
             +LR + GT+HE++        P    MA+L+ E++T    +PV  P  S LI  YDEHVL
Sbjct:   301 ILRTRKGTIHEIVSATALADRPSASRMAKLLCEEITTEQFSPVAFPGGSELIVQYDEHVL 360

Query:   180 VSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQ 239
              + +KFGV+YQ+ GQ TEE+LF N H SPAFD+FL+++G  + L   + YRGGLDT   Q
Sbjct:   361 TNTYKFGVIYQKGGQTTEEQLFGNPHGSPAFDEFLSMIGDSVQLNGFQKYRGGLDTAHNQ 420

Query:   240 TGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMI 299
             TG Q+V+  FK REIMFHVST+LP+T  D QQLQRKRHIGNDIVAI+FQE NTPF+PDMI
Sbjct:   421 TGHQSVFSEFKNREIMFHVSTMLPYTIGDAQQLQRKRHIGNDIVAIIFQEANTPFAPDMI 480

Query:   300 ASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKL 359
             AS+FLHA++VVQ ID  T   RY+VSV ARDDVPFFGP  P P+IF+   DF+ FLLTKL
Sbjct:   481 ASNFLHAYVVVQPIDALTDRVRYRVSVAARDDVPFFGPTLPTPSIFKRGQDFRNFLLTKL 540

Query:   360 INAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGT 419
             INAENAAYK+ KFAKL  RTRSSLL  L   L+E+   +     E T    +S G    T
Sbjct:   541 INAENAAYKSSKFAKLAERTRSSLLDGLHATLRERAEFYATPLLEST----SSGGESAAT 596

Query:   420 RFIDTEHSNFVGVDNELGPVLLSTKTELVG 449
                 +  SN  G     G +L S K   +G
Sbjct:   597 T---SSSSNSYG-----GGILSSVKKAFIG 618

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0030695 "GTPase regulator activity" evidence=IEA

UNIPROTKB|H2L055 F53A10.2 "Protein F53A10.2, isoform c" [Caenorhabditis elegans (taxid:6239)]

 Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
 Identities = 218/450 (48%), Positives = 285/450 (63%)

Query:     2 QTSRDESRTSSSQHDKNNSKELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQNSNSH 61
             Q  +   +T+ S      ++ ++ E L    PYP IV P S G+W+DG   +   +   +
Sbjct:   182 QNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLP-SNGFWMDGVNQQHHMDDQVN 240

Query:    62 QHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRL 121
                  +  R K+E D+T+ CYRR F GREH +F   D  +GP++LS +TE++ +  H R+
Sbjct:   241 NMNVNSCARFKLETDETSHCYRRHFFGREHHDFFANDPIVGPLVLSVRTEVISSCDHFRI 300

Query:   122 LLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVL 179
             +LR + GT+HE++        P    MA+L+ E++T    +PV  P  S LI  YDEHVL
Sbjct:   301 ILRTRKGTIHEIVSATALADRPSASRMAKLLCEEITTEQFSPVAFPGGSELIVQYDEHVL 360

Query:   180 VSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQ 239
              + +KFGV+YQ+ GQ TEE+LF N H SPAFD+FL+++G  + L   + YRGGLDT   Q
Sbjct:   361 TNTYKFGVIYQKGGQTTEEQLFGNPHGSPAFDEFLSMIGDSVQLNGFQKYRGGLDTAHNQ 420

Query:   240 TGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMI 299
             TG Q+V+  FK REIMFHVST+LP+T  D QQLQRKRHIGNDIVAI+FQE NTPF+PDMI
Sbjct:   421 TGHQSVFSEFKNREIMFHVSTMLPYTIGDAQQLQRKRHIGNDIVAIIFQEANTPFAPDMI 480

Query:   300 ASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKL 359
             AS+FLHA++VVQ ID  T   RY+VSV ARDDVPFFGP  P P+IF+   DF+ FLLTKL
Sbjct:   481 ASNFLHAYVVVQPIDALTDRVRYRVSVAARDDVPFFGPTLPTPSIFKRGQDFRNFLLTKL 540

Query:   360 INAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTSNGSGTGT 419
             INAENAAYK+ KFAKL  RTRSSLL  L   L+E+   +     E T    +S G    T
Sbjct:   541 INAENAAYKSSKFAKLAERTRSSLLDGLHATLRERAEFYATPLLEST----SSGGESAAT 596

Query:   420 RFIDTEHSNFVGVDNELGPVLLSTKTELVG 449
                 +  SN  G     G +L S K   +G
Sbjct:   597 T---SSSSNSYG-----GGILSSVKKAFIG 618

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F2Z357 RAP1GAP "Rap1 GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 218/429 (50%), Positives = 282/429 (65%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
             MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct:     5 MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIT 64

Query:    56 QNSNSHQ-HGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
                 +     PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct:    65 SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIG 122

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct:   123 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 182

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct:   183 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 242

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct:   243 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 302

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct:   303 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 362

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++ +     
Sbjct:   363 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDK---ME 419

Query:   413 NGSGTGTRF 421
             NGSG G  F
Sbjct:   420 NGSGGGGFF 428

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|G3V1A7 RAP1GAP "RAP1, GTPase activating protein 1, isoform CRA_d" [Homo sapiens (taxid:9606)]

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 218/429 (50%), Positives = 282/429 (65%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
             MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct:     5 MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIT 64

Query:    56 QNSNSHQ-HGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
                 +     PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct:    65 SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIG 122

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct:   123 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 182

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct:   183 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 242

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct:   243 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 302

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct:   303 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 362

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++ +     
Sbjct:   363 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDK---ME 419

Query:   413 NGSGTGTRF 421
             NGSG G  F
Sbjct:   420 NGSGGGGFF 428

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|J3KPC5 RAP1GAP "Rap1 GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 218/429 (50%), Positives = 282/429 (65%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
             MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct:    36 MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIT 95

Query:    56 QNSNSHQ-HGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
                 +     PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct:    96 SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIG 153

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct:   154 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 213

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct:   214 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 273

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct:   274 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 333

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct:   334 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 393

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++ +     
Sbjct:   394 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDK---ME 450

Query:   413 NGSGTGTRF 421
             NGSG G  F
Sbjct:   451 NGSGGGGFF 459

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|J3QSS6 RAP1GAP "Rap1 GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 218/429 (50%), Positives = 282/429 (65%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
             MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct:    69 MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIT 128

Query:    56 QNSNSHQ-HGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
                 +     PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct:   129 SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIG 186

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct:   187 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 246

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct:   247 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 306

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct:   307 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 366

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct:   367 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 426

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++ +     
Sbjct:   427 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDK---ME 483

Query:   413 NGSGTGTRF 421
             NGSG G  F
Sbjct:   484 NGSGGGGFF 492

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|P47736 RAP1GAP "Rap1 GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 218/429 (50%), Positives = 282/429 (65%)

Query:     1 MQTSR-DESRTSSSQHDKNNSKEL----LEETLRGSLPYPMIVTPPSGGYWLDGYENESR 55
             MQ SR DE R S     K     +    + E L    P+P+I+ P  GGYW++G  +E  
Sbjct:     5 MQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEIT 64

Query:    56 QNSNSHQ-HGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVG 114
                 +     PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G
Sbjct:    65 SIPETEPLQSPTT--KVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIG 122

Query:   115 NQSHTRLLLRLKTGTVHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIA 172
             +Q H RLLLR K  T H+++P +C    P    MA+LV E +      PVL P+AS LI 
Sbjct:   123 DQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 182

Query:   173 AYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGG 232
              +DEHV+ + FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGG
Sbjct:   183 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 242

Query:   233 LDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNT 292
             LD    QTG ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NT
Sbjct:   243 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 302

Query:   293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFK 352
             PF PDMIAS+FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+
Sbjct:   303 PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQ 362

Query:   353 EFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGEDTRHGDTS 412
             EFLLTKLINAE A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++ +     
Sbjct:   363 EFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDK---ME 419

Query:   413 NGSGTGTRF 421
             NGSG G  F
Sbjct:   420 NGSGGGGFF 428

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=NAS

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0016020 "membrane" evidence=IDA

GO:0003924 "GTPase activity" evidence=NAS

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0032318 "regulation of Ras GTPase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0017016 "Ras GTPase binding" evidence=IPI

GO:0006184 "GTP catabolic process" evidence=NAS

GO:0043547 "positive regulation of GTPase activity" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P47736	RPGP1_HUMAN	No assigned EC number	0.5108	0.7598	0.6108	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	533
pfam02145	187	pfam02145, Rap_GAP, Rap/ran-GAP	1e-91

>gnl|CDD|216901 pfam02145, Rap_GAP, Rap/ran-GAP

 Score =  277 bits (712), Expect = 1e-91
 Identities = 95/189 (50%), Positives = 126/189 (66%), Gaps = 3/189 (1%)

Query: 200 LFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVS 259
           + +N   SPAFD FL+ LG ++ LK HKGYRGGLDT+   TGE ++Y   ++ EIMFHVS
Sbjct: 1   ILSNNEGSPAFDDFLSSLGDKVRLKGHKGYRGGLDTKNDSTGEYSIYWRDRDTEIMFHVS 60

Query: 260 TLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVI-DPNTP 318
           T++P  +NDPQQL++KRHIGNDIV I+F E+  PF+P+ I S F H FIV+  + + ++ 
Sbjct: 61  TMMPTNDNDPQQLEKKRHIGNDIVNIIFNESGLPFNPNTIKSQFNHVFIVIYPLKNDDSK 120

Query: 319 NTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELR 378
           +T YKVSV  +D VP FGP  P+  IF       +F+ TK INAE AA  +  FA    R
Sbjct: 121 STLYKVSVYRKDGVPEFGPLLPEKIIFE--KSLPDFVRTKAINAERAARSSPSFASKWER 178

Query: 379 TRSSLLHSL 387
           TR+ LL  L
Sbjct: 179 TRARLLKDL 187

Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	533
KOG3686|consensus	740		100.0
PF02145	188	Rap_GAP: Rap/ran-GAP; InterPro: IPR000331 The Rap/	100.0
KOG3687|consensus	1697		100.0
KOG3652|consensus	1215		99.78
KOG3686|consensus	740		98.04

>KOG3686|consensus

Probab=100.00  E-value=1e-96  Score=807.78  Aligned_cols=432  Identities=37%  Similarity=0.544  Sum_probs=379.5

Q ss_pred             CCCccccccccCCCCCCcccH-----------------------HHHHHHHcCCCCCceEecCCCCceeeeCCCCCCCCC
Q psy13052          1 MQTSRDESRTSSSQHDKNNSK-----------------------ELLEETLRGSLPYPMIVTPPSGGYWLDGYENESRQN   57 (533)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~e~l~~~~p~p~i~~p~~~gywieg~~~~~~~~   57 (533)
                      ||++++...|+|+|.+.....                       ..+.+++-+.++++++++|.+|+||+||..+.....
T Consensus        55 ~~s~e~~~s~~s~~~~~~~~~~~~l~~~~~~~~~~sg~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~  134 (740)
T KOG3686|consen   55 MDSSETGDSMSSSPTIAEDNVFHDLLDSTPAFTSESGGELAWTWRRVISLVDPYGNSSAHVAPDCGSLTIENLSLVELHP  134 (740)
T ss_pred             CCccccchhhccCCCcccccchhhhhhcccceecCcccccchhhhhhhccccccCCccccccccccccccccccccccCc
Confidence            678885555555777665542                       134677888999999999999999999998766554


Q ss_pred             CCCCCCCCCCCCCccccccchhhhHhhhcCCCcceeEEEecCCCCcEEEEEEEeeecCcceEEEEEec-cCCeEEEEecC
Q psy13052         58 SNSHQHGPTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRL-KTGTVHELLPP  136 (533)
Q Consensus        58 ~~~~~~~~~~~~~~~le~d~~a~~Yrk~F~gkeH~Ny~g~d~~lGpvilSik~e~~~~~~~~RiIlR~-k~Gt~~~~ip~  136 (533)
                      ..........++..+.++|.+|+||||||+||+|+||+|.|+.+||++||+++|..+++.+||||+|+ |+++.++.+|.
T Consensus       135 ~~~~~~~~~~~~~~le~~d~~a~~yr~~f~~keh~n~~g~d~~lgpi~lS~~~e~~~s~~h~Rii~rtlr~~~q~~~~p~  214 (740)
T KOG3686|consen  135 LAHWLALVTVPPILLERCDLGARYYRKEFTGKEHPNYLGADELLGPIRLSQSREVPASCAHYRIIARTLRKMTQEDASPK  214 (740)
T ss_pred             cccccccccCCCeeecccCchHHHHHHHHhcccCccccCCCchhceeEEEEeeeccccCcceEEEEecccccccccccCC
Confidence            44333344445566777888999999999999999999999999999999999988888889999999 99999999998


Q ss_pred             CC--CCCChHHHHHHHhhhcCCCCcccccCchHHHHHHhhcccCcccceeEEEEEEeCCCCCHhHhhcCCCCCHHHHHHH
Q psy13052        137 NC--ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFL  214 (533)
Q Consensus       137 ~~--~~ps~~~~ak~l~~~l~~~~~~pv~~pk~~~~L~~lDe~~~~~~~KfGVlYvk~GQttEeEIlsN~~~S~~F~eFL  214 (533)
                      ++  ..|....++...+......-+.++.+||++++|+.|||+.++.+|||||+|||.||+||||||+|+.+||+|+|||
T Consensus       215 s~~~~l~l~~~l~~~~p~~~~~~l~~~v~~pk~~~~l~~lDe~~~~~~~K~gIly~k~GQ~teEem~~Ne~~sPaF~eFL  294 (740)
T KOG3686|consen  215 SPSNSLPLFSMLASMNPEDEQILLRLLVNTPKVERALVILDEQVISITHKFGILYVKTGQKTEEEMYNNERGSPAFEEFL  294 (740)
T ss_pred             CccccCChHHHHHhhCchhhhhhhhhcccChHHHHHHHhhhhhhheeeeeEEEEEecccCccHHHHhcCCccChhHHHHH
Confidence            77  3333344554443333334457889999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCeEecCCCCCcccCcccCCCCCCCEEEEEeecceEEEEEeccCCCCCCCChhhhhhccccCCCeEEEEEeCCCCCC
Q psy13052        215 NLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPF  294 (533)
Q Consensus       215 ~~LG~~V~Lk~~~gy~GGLD~~~~~tG~~svY~~~~~~EImFHVsTlLP~~~~D~Qql~RKRHIGNDiV~IVf~E~~~~f  294 (533)
                      ++|||+|+|++|+||+||||+++++||++++||.|+++||||||||||||+++|+||++||||||||+|+|||+|.+.||
T Consensus       295 ~~LGq~V~Lkgf~gyrggLdtk~dsTG~~svY~~~~~~EImFHvst~lp~~~~d~qq~~r~rHignDiV~ivfqe~~~pf  374 (740)
T KOG3686|consen  295 ALLGQFVSLKGFQGYRGGLDTKNDSTGTTSIYTQYQKLEIMFHVSTMLPYTDGDPQQLQRKRHIGNDIVTIVFQEEGTPF  374 (740)
T ss_pred             HHhhceeeccchHHHhhhhcccCCCCCceeeEEeecceEEEEecCccCCCCCCCHHHhccccccCcceEEEEeecCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccceEEEEEEecCCCCCCCcEEEEEEecCCCCCCCCCCCCCceecCChhhHHHHHHHHhhhhHhhhhchhhhh
Q psy13052        295 SPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAK  374 (533)
Q Consensus       295 ~p~~I~SqF~hv~IVV~p~~~~~~~~~YrV~V~~r~~Vp~FGP~lp~~~Vf~k~~~f~~fLl~KlINae~a~~~s~~Fa~  374 (533)
                      .|++|+|+|.||||||+|+.+|+.+..|+|+|+++++||+|||++|.++||+++++|++|||+|+||||||++++.+|++
T Consensus       375 ~p~~i~ShF~hvf~~v~~~~~~t~~~~y~~~it~~~~vp~fgp~l~~~~vf~~~~~f~~fLlak~INae~A~~~s~kf~~  454 (740)
T KOG3686|consen  375 SPGTIRSHFQHVFIVVRPHGPCTENVKYRVAITSKDDVPFFGPPLPTGDVFKKGTVFRNFLLAKAINAERAAGESIKFLQ  454 (740)
T ss_pred             CCccchhccceeEEEEEEcCCCCcccceeEEeecCCccCCcCCCCCCccccccccHHHHHHHHHHhcccchhcchHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcccccCCC------CCCCCCCCCCCCCCCCCc--cccceeeeEEEe
Q psy13052        375 LELRTRSSLLHSLCEELKEKTREFLGGE------GEDTRHGDTSNGSGTGTR--FIDTEHSNFVGV  432 (533)
Q Consensus       375 ~~~RtR~~lL~~l~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~--Fl~~~k~~f~g~  432 (533)
                      ++.|||++||++|++++...+..+++..      .++.++..+.+.++++..  |+..++...+.+
T Consensus       455 ~~~rtR~~lL~~L~e~~~~~~~~~~~~~~s~~~~~~~~p~~~~~~~~a~~~~~a~~~~vk~~~~~~  520 (740)
T KOG3686|consen  455 MADRTRDDLLDDLPENLVPSTTDEAAQFTSMISLGSRQPQPLKTSSAAHDHLPAFTWNVKLLEWRS  520 (740)
T ss_pred             HHHHHHHHHHHHHHHhcCCCccccccccchhhhhcCCCCCcCCCCCcccccchhhhhhhhhhhhcc
Confidence            9999999999999999999997766631      123555666655555555  888888887774

>PF02145 Rap_GAP: Rap/ran-GAP; InterPro: IPR000331 The Rap/ran-GAP domain is found in the GTPase activating protein (GAP) responsible for the activation of nuclear Ras-related regulatory proteins Rap1, Rsr1 and Ran in vitro converting it to the putatively inactive GDP-bound state [, ]

Probab=100.00  E-value=1.2e-59  Score=451.77  Aligned_cols=186  Identities=47%  Similarity=0.767  Sum_probs=141.7

Q ss_pred             hhcCCCCCHHHHHHHHhcCCeEecCCCCCcccCcccCCCCCCCEEEEEeecceEEEEEeccCCCCCCCChhhhhhccccC
Q psy13052        200 LFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIG  279 (533)
Q Consensus       200 IlsN~~~S~~F~eFL~~LG~~V~Lk~~~gy~GGLD~~~~~tG~~svY~~~~~~EImFHVsTlLP~~~~D~Qql~RKRHIG  279 (533)
                      ||+|+++|++|++||++|||+|+|++|+||+||||++.+.||++++||++.+.|||||||||||+.++|+||++||||||
T Consensus         1 il~N~~~S~~f~~Fl~~LG~~V~L~~~~~y~GGLD~~~~~~G~~s~y~~~~~~EimFHVstlmP~~~~d~q~~~KKrhIG   80 (188)
T PF02145_consen    1 ILSNTEGSPRFEEFLSSLGWKVDLKGHKGYSGGLDTKNDTTGEYSYYYADDIYEIMFHVSTLMPNNENDPQQLEKKRHIG   80 (188)
T ss_dssp             HHT--S--HHHHHHHHHHSEEEESTT--S--TT--SSS-TT-SEEEEEESSS-EEEEEECCCS---TT-SSSHHHHHHHT
T ss_pred             CCCCCcCCHHHHHHHHHhCCEEEcCCCcCcCCCCCccccCCCCEEEEEEeCCEEEEEEecccCCCCCCChHHHHHHHHhc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEEeCCCCCCCCCccccccceEEEEEEecCCC-CCCCcEEEEEEecCCCCCCCCCCCCCceecCChhhHHHHHHH
Q psy13052        280 NDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPN-TPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTK  358 (533)
Q Consensus       280 NDiV~IVf~E~~~~f~p~~I~SqF~hv~IVV~p~~~~-~~~~~YrV~V~~r~~Vp~FGP~lp~~~Vf~k~~~f~~fLl~K  358 (533)
                      ||+|+|||+|++.+|+|++|+||||||+|||+|+... ....+|+|+|.+|++||+|||++|++.|+.+  .|++|||+|
T Consensus        81 ND~V~IVf~E~~~~y~~~~i~SqFn~V~IvI~p~~~~~~~~~~y~V~v~~k~~v~~fgP~~~~~~v~~~--~l~~~vr~~  158 (188)
T PF02145_consen   81 NDIVVIVFNESGQPYDPSTIKSQFNHVFIVIYPLSNGSSKSPLYRVSVVRKDDVPPFGPLLPESIVSKK--SLPEFVRQK  158 (188)
T ss_dssp             T-SEEEEEESS-----GGGS--SS--EEEEEEEES--SSSS-EEEEEEEE-TTS---SS---SS-EEES--HHHHHHHHH
T ss_pred             CCEEEEEEeCCCCccChhhccccCceEEEEEEecccCCCCCceEEEEEEEcCCCCCcCCCCCCCeECHH--HHHHHHHHH
Confidence            9999999999999999999999999999999999743 3345999999999999999999999988754  999999999


Q ss_pred             HhhhhHhhhhc-hhhhhhHHHHHHHHHHHH
Q psy13052        359 LINAENAAYKA-HKFAKLELRTRSSLLHSL  387 (533)
Q Consensus       359 lINae~a~~~s-~~Fa~~~~RtR~~lL~~l  387 (533)
                      +|||++||+.+ ++|+++..|+|+++|++|
T Consensus       159 ~ina~~a~~~~~~~f~~~~~~~r~~~i~~i  188 (188)
T PF02145_consen  159 AINAERAARSSQPQFASPWRRRRQRLIKDI  188 (188)
T ss_dssp             HHHHHHHHTTS-HHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhHHhhhHHHHHHHHHhccC
Confidence            99999999999 999999999999999986

Ran is an evolutionary conserved member of the Ras superfamily that regulates all receptor-mediated transport between the nucleus and the cytoplasm. RanGAP is a leucine rich repeat containing protein which forms a highly curved crescent. Each LRR forms a short beta-strand and a longer alpha-helix that results in a beta-alpha hairpin motif []. The domain is also present in tuberin (a tuberous sclerosis homologue protein) that specifically stimulates the intrinsic GTPase activity of Ras-related protein Rap1A suggesting a possible mechanism for its role in the regulation of cellular growth.; GO: 0005096 GTPase activator activity, 0051056 regulation of small GTPase mediated signal transduction, 0005622 intracellular; PDB: 1SRQ_C 3BRW_B.

>KOG3687|consensus

Probab=100.00  E-value=1.8e-33  Score=310.60  Aligned_cols=244  Identities=28%  Similarity=0.391  Sum_probs=189.5

Q ss_pred             CChHHHHHHHhhhcCCCCcccccCc----hHHHHHHhhcccCcccceeEEEEEEeCCCC-CHhHhhcCCCCCHHHHHHHH
Q psy13052        141 ASPQTMARLVNEQLTCSSLTPVLCP----QASSLIAAYDEHVLVSQFKFGVLYQRHGQI-TEEELFANKHTSPAFDQFLN  215 (533)
Q Consensus       141 ps~~~~ak~l~~~l~~~~~~pv~~p----k~~~~L~~lDe~~~~~~~KfGVlYvk~GQt-tEeEIlsN~~~S~~F~eFL~  215 (533)
                      |+-..|.-+.-++++-..=.|++.|    .+.+++..+|..|..++||+||+||+.||. +|-+||+|+++|.+|.|||.
T Consensus      1400 psf~F~qly~~p~~g~~~n~PLllp~e~~s~~rAVSl~D~iP~~EthKiGvlYVG~gQ~n~E~~IL~N~hgS~ry~eFL~ 1479 (1697)
T KOG3687|consen 1400 PSFVFLQLYHSPFFGDESNKPLLLPNESQSFERAVSLLDQIPSYETHKIGVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1479 (1697)
T ss_pred             cchhhHhhhcCcccccccCCceecCCcchhHHHHHHHHHhCCccccceeeEEEEcccccccHHHHHhcCCccHHHHHHHh
Confidence            3333343333344442223455443    357899999999999999999999999999 79999999999999999999


Q ss_pred             hcCCeEecCCCC--CcccCcccCCCCCCCEEEEEeecceEEEEEeccCCCCC-CCChhhhhhccccCCCeEEEEEeCCCC
Q psy13052        216 LLGQRILLKDHK--GYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFT-ENDPQQLQRKRHIGNDIVAIVFQETNT  292 (533)
Q Consensus       216 ~LG~~V~Lk~~~--gy~GGLD~~~~~tG~~svY~~~~~~EImFHVsTlLP~~-~~D~Qql~RKRHIGNDiV~IVf~E~~~  292 (533)
                      .||..|+||+..  .|.||||.. +.+|.+++.|.++..+++|||+||||++ ++||.+.+||||||||+|.|||+|++.
T Consensus      1480 glGTL~eLK~~q~~~~~ggLDR~-g~DG~FAYcWKDdI~Q~vFH~aTlMPTN~~dDP~C~~KKrHIGNDFV~IIyNESGe 1558 (1697)
T KOG3687|consen 1480 GLGTLIELKDCQPDVYLGGLDRC-GEDGQFAYCWKDDIMQAVFHIATLMPTNDVDDPRCDKKKRHIGNDFVSIIYNESGE 1558 (1697)
T ss_pred             CcceEEEeccccccceeeeeccc-CCCCceEEEehhhhHHHhhhhhhccccccccCCCCchhhhhcCCceEEEEecCCcc
Confidence            999999999974  499999976 5999999999999999999999999987 789999999999999999999999999


Q ss_pred             CCCCCccccccceEEEEEEecCCCCCCCcEEEEEEecCCCCCCCCCCCCCceecCChhhHHHHHHHHhhhhHhh--hh--
Q psy13052        293 PFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAA--YK--  368 (533)
Q Consensus       293 ~f~p~~I~SqF~hv~IVV~p~~~~~~~~~YrV~V~~r~~Vp~FGP~lp~~~Vf~k~~~f~~fLl~KlINae~a~--~~--  368 (533)
                      .|+.++|++|||.|+|||.|++.+.    -||.+.+|.++-.|-=. ..-.|+ .++.+--..++.++||.-|+  |.  
T Consensus      1559 EY~l~TI~gQFNfv~VIVtPld~~~----nRv~~q~r~~~~KFv~~-~~YkIV-Sdr~lP~~aRqmaLhAn~aS~VYhs~ 1632 (1697)
T KOG3687|consen 1559 EYKLGTIKGQFNFVHVIVTPLDYEC----NRVSLQCRKDMEKFVDT-SVYKIV-SDRNLPFVARQMALHANMASQVYHSS 1632 (1697)
T ss_pred             ccccCccccccceEEEEeccchhhh----hHHHHHHHHHHHhheee-eeEEEe-cCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999997543    36666666665543211 111233 35677778899999998875  33  


Q ss_pred             --chhhhhh-HHHHHHHHHHHHHHHHHh
Q psy13052        369 --AHKFAKL-ELRTRSSLLHSLCEELKE  393 (533)
Q Consensus       369 --s~~Fa~~-~~RtR~~lL~~l~~~~~~  393 (533)
                        ++.|+.+ .+|-|  .|+-|-+|+.+
T Consensus      1633 ~~~~~Y~s~W~ERLR--~LKRLR~K~~e 1658 (1697)
T KOG3687|consen 1633 NPTDIYPSKWIERLR--HLKRLRQKICE 1658 (1697)
T ss_pred             CcCCcchHHHHHHHH--HHHHHHHHHHH
Confidence              3445543 23433  34555555544

>KOG3652|consensus

Probab=99.78  E-value=4.3e-18  Score=184.25  Aligned_cols=224  Identities=19%  Similarity=0.292  Sum_probs=175.0

Q ss_pred             chHHHHHHh-hcccCcccceeEEEEEEeCCCCCHhHhhcCC----CCCHHHHHHHHhcCCeEecCCCCCcccCcccCCC-
Q psy13052        165 PQASSLIAA-YDEHVLVSQFKFGVLYQRHGQITEEELFANK----HTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFR-  238 (533)
Q Consensus       165 pk~~~~L~~-lDe~~~~~~~KfGVlYvk~GQttEeEIlsN~----~~S~~F~eFL~~LG~~V~Lk~~~gy~GGLD~~~~-  238 (533)
                      .|+.++|-. +|-.+.|....+.|+|+|+||.+..|||.|.    ...|+|-+||..|||-|++.-|+||+|...|.|. 
T Consensus       853 ekFfdDig~tlD~~P~RpfdTafIFYmK~GQk~~qdILeNaensqn~~p~F~eFL~nLG~~idiGrH~gWTGHvSTawSi  932 (1215)
T KOG3652|consen  853 EKFFDDIGETLDCAPARPFDTAFIFYMKEGQKIAQDILENAENSQNSCPDFCEFLANLGEGIDIGRHDGWTGHVSTAWSI  932 (1215)
T ss_pred             HHHHHhhhhhcccccCCccceEEEEEeccchhhHHHHHHhHhhccccChHHHHHHHhcccceeeccCCCccceeeeeeee
Confidence            457778865 9999999999999999999999999999996    4569999999999999999999999999988774 


Q ss_pred             -----------------------CCC-CEEEEEee---cceEEEEEeccCCC-----------CCC------CC------
Q psy13052        239 -----------------------QTG-EQAVYQVF---KEREIMFHVSTLLP-----------FTE------ND------  268 (533)
Q Consensus       239 -----------------------~tG-~~svY~~~---~~~EImFHVsTlLP-----------~~~------~D------  268 (533)
                                             .+| ++++||++   ...||.|-|++--|           ...      ++      
T Consensus       933 nccddgEgk~QE~~d~eD~gasIfdG~k~aL~~aDeqgalsEiAFlmPserpVe~~kdnieSp~iSsdqdSdnNrsivsd 1012 (1215)
T KOG3652|consen  933 NCCDDGEGKLQEEADGEDHGASIFDGIKHALWWADEQGALSEIAFLMPSERPVEMFKDNIESPAISSDQDSDNNRSIVSD 1012 (1215)
T ss_pred             ccccccchhhhhhcccccchhhhhcchhhheeeecccCccceeEEeccCcchHHHHhhcccCCcccccccCcCccccccc
Confidence                                   355 67899999   66999999988322           110      00      


Q ss_pred             ----------h-------------------hhh-----hhc----ccc----CCCeEEEEEeCCCC---CCC--------
Q psy13052        269 ----------P-------------------QQL-----QRK----RHI----GNDIVAIVFQETNT---PFS--------  295 (533)
Q Consensus       269 ----------~-------------------Qql-----~RK----RHI----GNDiV~IVf~E~~~---~f~--------  295 (533)
                                +                   |.+     -+|    +.+    |--.|++||.|...   .|.        
T Consensus      1013 ~dl~~gi~kd~~mmLn~elf~ehsdnl~Sdq~~~Psa~~~kl~~g~pV~plg~a~ki~lVWlER~dDienFPisELi~e~ 1092 (1215)
T KOG3652|consen 1013 DDLFDGIHKDNGMMLNAELFGEHSDNLLSDQDFRPSAGGGKLMGGGPVGPLGGALKIMLVWLERPDDIENFPISELIGEC 1092 (1215)
T ss_pred             cccccccccCCcceecHhhccccCCccccccccCccccCCCCCCCCCCCCCCCceEEEEEEeecccccccCcHHHHhccc
Confidence                      0                   000     001    111    23389999999753   332        


Q ss_pred             -------------CCcc---ccccceEEEEEEecCCCCCCCcEEEEEE-ecCCCCCCCCCCCCCceecCChhhHHHHHHH
Q psy13052        296 -------------PDMI---ASHFLHAFIVVQVIDPNTPNTRYKVSVT-ARDDVPFFGPNFPQPAIFRADSDFKEFLLTK  358 (533)
Q Consensus       296 -------------p~~I---~SqF~hv~IVV~p~~~~~~~~~YrV~V~-~r~~Vp~FGP~lp~~~Vf~k~~~f~~fLl~K  358 (533)
                                   |...   .++--|-.|+|+|++    .+.|+|++. +.......||+++++.|  .-+.|..|++++
T Consensus      1093 d~Gtd~~a~~aqkpei~~aTnleka~~iIFIH~le----~GifqIkiqGatgkF~~a~PLVDGmiV--S~~aLgf~iRnT 1166 (1215)
T KOG3652|consen 1093 DDGTDLLAGGAQKPEIGGATNLEKAHHIIFIHLLE----PGIFQIKIQGATGKFGEAGPLVDGMIV--SLAALGFFIRNT 1166 (1215)
T ss_pred             ccchhhhcCCccCccccCcccccccceEEEEEecC----CceEEEEeeccccccccccccccceee--ehhhhhHHHHHH
Confidence                         2222   233346679999997    478999997 34557788999999866  468999999999


Q ss_pred             HhhhhHh-hhhchhhhhhHHHHHHHHHHHHHHHHHhhc
Q psy13052        359 LINAENA-AYKAHKFAKLELRTRSSLLHSLCEELKEKT  395 (533)
Q Consensus       359 lINae~a-~~~s~~Fa~~~~RtR~~lL~~l~~~~~~~~  395 (533)
                      +||.++. ....+.|..++.| |++.|-++++||..+.
T Consensus      1167 iiNicRR~r~E~dnYs~PHtR-RKQaItd~akKY~~Kq 1203 (1215)
T KOG3652|consen 1167 IINICRRDRAEIDNYSFPHTR-RKQAITDFAKKYAAKQ 1203 (1215)
T ss_pred             HHHHHHhhhhhhccCCCcchh-hHHHHHHHHHHHhhhh
Confidence            9999987 6789999999999 9999999999999887

>KOG3686|consensus

Probab=98.04  E-value=1.8e-06  Score=97.51  Aligned_cols=74  Identities=27%  Similarity=0.449  Sum_probs=68.0

Q ss_pred             CCCCccccceeeeEEEecCCCceeEeeeeeeEecccceeehhhhc-ccCccccccCCCCCCCChh--HHHhhhccch
Q psy13052        416 GTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRL-KTGTVHELLPPNCANASPQ--TMARLRTRSS  489 (533)
Q Consensus       416 ~~~~~Fl~~~k~~f~g~d~~lg~l~lS~k~e~v~~qe~lRiiLR~-r~~t~~~~ip~~~~~~~p~--~~akl~~~~~  489 (533)
                      .|+.+|++++|.++.|.|..+|++.+|+++|.+++++|+|||+|+ |.+|.||.+|.+++...|.  .||++.|.+.
T Consensus       158 ~yr~~f~~keh~n~~g~d~~lgpi~lS~~~e~~~s~~h~Rii~rtlr~~~q~~~~p~s~~~~l~l~~~l~~~~p~~~  234 (740)
T KOG3686|consen  158 YYRKEFTGKEHPNYLGADELLGPIRLSQSREVPASCAHYRIIARTLRKMTQEDASPKSPSNSLPLFSMLASMNPEDE  234 (740)
T ss_pred             HHHHHHhcccCccccCCCchhceeEEEEeeeccccCcceEEEEecccccccccccCCCccccCChHHHHHhhCchhh
Confidence            578899999999999999999999999999999999999999999 9999999999988776655  7999777666

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	533
1srq_A	341	Crystal Structure Of The Rap1gap Catalytic Domain L		1e-107
1srq_A	341	Crystal Structure Of The Rap1gap Catalytic Domain L		8e-08
3brw_A	341	Structure Of The Rap-Rapgap Complex Length = 341		1e-107
3brw_A	341	Structure Of The Rap-Rapgap Complex Length = 341		8e-08

>pdb|1SRQ|A Chain A, Crystal Structure Of The Rap1gap Catalytic Domain Length = 341

Iteration: 1
 Score =  387 bits (993), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/338 (55%), Positives = 243/338 (71%), Gaps = 2/338 (0%)
Query: 70  RSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGT 129
           + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T
Sbjct: 4   KVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRT 63
Query: 130 VHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGV 187
            H+++P +C    P    MA+LV E +      PVL P+AS LI  +DEHV+ + FKFGV
Sbjct: 64  YHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGV 123
Query: 188 LYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQ 247
           +YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGGLD    QTG ++VY 
Sbjct: 124 IYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYC 183
Query: 248 VFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAF 307
            F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NTPF PDMIAS+FLHA+
Sbjct: 184 NFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAY 243
Query: 308 IVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAY 367
           +VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+EFLLTKLINAE A Y
Sbjct: 244 VVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACY 303
Query: 368 KAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGED 405
           KA KFAKLE RTR++LL +L EEL   ++  +G  G++
Sbjct: 304 KAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDE 341

>pdb|1SRQ|A Chain A, Crystal Structure Of The Rap1gap Catalytic Domain Length = 341

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 421 FIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT 480
           F+  EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T H+++P +C    P  
Sbjct: 20  FLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNV 79
Query: 481 M 481
           +
Sbjct: 80  V 80

>pdb|3BRW|A Chain A, Structure Of The Rap-Rapgap Complex Length = 341

Iteration: 1
 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/338 (55%), Positives = 242/338 (71%), Gaps = 2/338 (0%)
Query: 70  RSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGT 129
           + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T
Sbjct: 4   KVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRT 63
Query: 130 VHELLPPNCANASPQT--MARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGV 187
            H+++P +C    P    MA+LV E +      PVL P+AS LI  +DEHV+ + FKFGV
Sbjct: 64  YHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGV 123
Query: 188 LYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQ 247
           +YQ+ G  +EEELF+    SPAF +FL  LGQ++ L+D KG+RGGLD    QTG ++VY 
Sbjct: 124 IYQKLGATSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYC 183
Query: 248 VFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAF 307
            F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NTPF PDMIAS+FLHA+
Sbjct: 184 NFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAY 243
Query: 308 IVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAY 367
           +VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+EFLLTKLINAE A Y
Sbjct: 244 VVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACY 303
Query: 368 KAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGED 405
           KA KFAKLE RTR++LL +L EEL   ++  +G  G++
Sbjct: 304 KAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDE 341

>pdb|3BRW|A Chain A, Structure Of The Rap-Rapgap Complex Length = 341

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 421 FIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT 480
           F+  EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T H+++P +C    P  
Sbjct: 20  FLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNV 79
Query: 481 M 481
           +
Sbjct: 80  V 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	533
1srq_A	341	RAP1GAP, GTPase-activating protein 1; mixed alpha-	1e-123
1srq_A	341	RAP1GAP, GTPase-activating protein 1; mixed alpha-	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1srq_A RAP1GAP, GTPase-activating protein 1; mixed alpha-beta, signaling protein; 2.90A {Homo sapiens} SCOP: e.55.1.1 PDB: 3brw_A* Length = 341

 Score =  364 bits (935), Expect = e-123
 Identities = 190/343 (55%), Positives = 245/343 (71%), Gaps = 4/343 (1%)

Query: 65  PTAPWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLR 124
           PT   + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G+Q H RLLLR
Sbjct: 1   PT--TKVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLR 58

Query: 125 LKTGTVHELLPPNC--ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQ 182
            K  T H+++P +C     +   MA+LV E +      PVL P+AS LI  +DEHV+ + 
Sbjct: 59  TKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNN 118

Query: 183 FKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGE 242
           FKFGV+YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGGLD    QTG 
Sbjct: 119 FKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGT 178

Query: 243 QAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASH 302
           ++VY  F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NTPF PDMIAS+
Sbjct: 179 ESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASN 238

Query: 303 FLHAFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINA 362
           FLHA++VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+EFLLTKLINA
Sbjct: 239 FLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINA 298

Query: 363 ENAAYKAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEGED 405
           E A YKA KFAKLE RTR++LL +L EEL   ++  +G  G++
Sbjct: 299 EYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDE 341

>1srq_A RAP1GAP, GTPase-activating protein 1; mixed alpha-beta, signaling protein; 2.90A {Homo sapiens} SCOP: e.55.1.1 PDB: 3brw_A* Length = 341

 Score = 57.9 bits (139), Expect = 2e-09
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 421 FIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT 480
           F+  EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T H+++P +C    P  
Sbjct: 20  FLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFP-- 77

Query: 481 MARLRTRSSLLHSLCEELKEKT 502
                    +   +CE++    
Sbjct: 78  -----NVVQMAKLVCEDVNVDR 94

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.4 bits (148), Expect = 5e-10
 Identities = 63/417 (15%), Positives = 117/417 (28%), Gaps = 95/417 (22%)

Query: 23  LLEETLRGSLPYPMIVTPPSGGYWLD-GYENESR-----------QNSNSHQHGPTAPWR 70
           +  +       Y +        +WL+    N              Q   +          
Sbjct: 166 VALDVCL---SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

Query: 71  SKIECDDTAKCYRRFFLGREHSN--FVGVDN----------ELG-PVLLSTK----TELV 113
            K+         RR    + + N   V + N           L   +LL+T+    T+ +
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLV-LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281

Query: 114 GNQSHTRL----------------LLRLKTGTVHELLPPNCANASPQTMA---------- 147
              + T +                LL        + LP      +P+ ++          
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 148 -RLVN-EQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEE--ELFAN 203
               N + + C  LT ++  ++S  +   +       F    ++     I      L   
Sbjct: 342 ATWDNWKHVNCDKLTTII--ESS--LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 204 KHTSPAFDQFLNLLGQRILL-KDHKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLL 262
                     +N L +  L+ K  K     + + + +   +   +    R I+ H +   
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 263 PFTENDPQQLQRKR----HIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQVIDPNTP 318
            F  +D       +    HIG+ +  I   E  T F    +   FL   I       N  
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517

Query: 319 ----NT-----RYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLL---TKLINAE 363
               NT      YK         P+   N P+    R  +   +FL      LI ++
Sbjct: 518 GSILNTLQQLKFYK---------PYICDNDPKYE--RLVNAILDFLPKIEENLICSK 563

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 47/369 (12%), Positives = 98/369 (26%), Gaps = 114/369 (30%)

Query: 234 DTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHI-------GNDIVAIV 286
           +   +   +     +  + E    +  ++         +     +         ++V   
Sbjct: 32  NFDCKDV-QDMPKSILSKEE----IDHII----MSKDAVSGTLRLFWTLLSKQEEMVQKF 82

Query: 287 FQETNTPFSPDMIASHFLHAFIVVQVIDPNTPNTRYKVSVTARD----DVPFFGP-NFPQ 341
            +E       +     FL + I  +   P+     Y   +  RD    D   F   N  +
Sbjct: 83  VEEV---LRINY---KFLMSPIKTEQRQPSMMTRMY---IEQRDRLYNDNQVFAKYNVSR 133

Query: 342 PAIFRADSDFKEFLLTKLINAEN----------------AAYKAHKFAK--------LEL 377
              +      ++ LL +L  A+N                    ++K           L L
Sbjct: 134 LQPYLK---LRQALL-ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL 189

Query: 378 RTRSS------LLHSLC---------------------EELKEKTREFLGGEG------- 403
           +  +S      +L  L                        ++ + R  L  +        
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249

Query: 404 ----EDTRHGDTSNGS----GTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTR 455
               ++ +  +  N S     T TR    + ++F+         L      L       +
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLT-TR--FKQVTDFLSAATTTHISLDHHSMTL--TPDEVK 304

Query: 456 LLLRLKTGTVHELLPPNCANASPQTM----ARLR----TRSSLLHSLCEELKEKTREFLG 507
            LL        + LP      +P+ +      +R    T  +  H  C++L       L 
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 508 G-EGEDTRH 515
             E  + R 
Sbjct: 365 VLEPAEYRK 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	533
1srq_A	341	RAP1GAP, GTPase-activating protein 1; mixed alpha-	100.0
1srq_A	341	RAP1GAP, GTPase-activating protein 1; mixed alpha-	98.99

>1srq_A RAP1GAP, GTPase-activating protein 1; mixed alpha-beta, signaling protein; 2.90A {Homo sapiens} SCOP: e.55.1.1 PDB: 3brw_A*

Probab=100.00  E-value=5.1e-105  Score=824.67  Aligned_cols=336  Identities=56%  Similarity=0.931  Sum_probs=323.1

Q ss_pred             CCCccccccchhhhHhhhcCCCcceeEEEecCCCCcEEEEEEEeeecCcceEEEEEeccCCeEEEEecCCC--CCCChHH
Q psy13052         68 PWRSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC--ANASPQT  145 (533)
Q Consensus        68 ~~~~~le~d~~a~~Yrk~F~gkeH~Ny~g~d~~lGpvilSik~e~~~~~~~~RiIlR~k~Gt~~~~ip~~~--~~ps~~~  145 (533)
                      +|+++||+|.+|+||||||+||||+||+|+|+.+||++|||++|+.+++++||+|||+++|++++.||.++  ..|++.+
T Consensus         2 ~~~~~le~d~~~~~Yr~~F~gk~H~n~~g~d~~lGpvilSi~~e~~~~~~~~r~ilRt~~gt~~~~ip~~~~~~~p~~~~   81 (341)
T 1srq_A            2 TTKVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQ   81 (341)
T ss_dssp             --CCCCCSCGGGGHHHHHTTTSSCEEEEEEETTTEEEEEEEEEEEETTEEEEEEEEECSSCEEEEEEECCCC--CCCHHH
T ss_pred             CcceEeecCCcchHHHhhCCCCceeeEEEEcCCCCcEEEEEEEeccCCceeEEEEEEcCCccEEEEEEccccccCCCHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999987  5788999


Q ss_pred             HHHHHhhhcCCCCcccccCchHHHHHHhhcccCcccceeEEEEEEeCCCCCHhHhhcCCCCCHHHHHHHHhcCCeEecCC
Q psy13052        146 MARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKD  225 (533)
Q Consensus       146 ~ak~l~~~l~~~~~~pv~~pk~~~~L~~lDe~~~~~~~KfGVlYvk~GQttEeEIlsN~~~S~~F~eFL~~LG~~V~Lk~  225 (533)
                      ++|++|+.++..++.|++.|++.++|..||+++++++||||||||++||++|+|||+|+++|++|.+||+.|||+|+|++
T Consensus        82 ~~k~~~~~~~~~~~~pi~~p~~~~~L~~lD~~~~~~~~K~GViYv~~GQ~~e~eIl~N~~gS~~f~eFL~~LG~~V~Lk~  161 (341)
T 1srq_A           82 MAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD  161 (341)
T ss_dssp             HHHHHCTTCCCSCCEECCCTTHHHHHHHHHHTTSCCEEEEEEEEECSSCCSHHHHHCCCSCCHHHHHHHHHHSEEEESTT
T ss_pred             HHHHHhhhhcccccccccCccHHHHHHHHhccCCcCceEEEEEEECCCCCCHHHHhcCCCCCHHHHHHHHHhCCcEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCcccCCCCCCCEEEEEeecceEEEEEeccCCCCCCCChhhhhhccccCCCeEEEEEeCCCCCCCCCccccccce
Q psy13052        226 HKGYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLH  305 (533)
Q Consensus       226 ~~gy~GGLD~~~~~tG~~svY~~~~~~EImFHVsTlLP~~~~D~Qql~RKRHIGNDiV~IVf~E~~~~f~p~~I~SqF~h  305 (533)
                      |+||+||||+++++||++++||+|.++|||||||||||++++|+||++||||||||+|+|||+|++.||+|++|+|||||
T Consensus       162 ~~gy~GGLD~~~~~tG~~s~Y~~~~~~EImFHVsTlmP~~~~D~qq~~kKRHIGND~V~IVf~E~~~~f~p~~I~S~Fn~  241 (341)
T 1srq_A          162 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLH  241 (341)
T ss_dssp             CCSCCTTCCSSSCTTCSEEEEEECSSCEEEEEEGGGSCCCTTCTTCHHHHHHHTTCSEEEEEESSCCCCCGGGSCCSSCC
T ss_pred             CCCCCcCCCccCCCCCCEEEEEEeCCeEEEEEecCCCCCCcCchhhhhhccccCCCEEEEEEeCCCCCcCCccccccCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEecCCCCCCCcEEEEEEecCCCCCCCCCCCCCceecCChhhHHHHHHHHhhhhHhhhhchhhhhhHHHHHHHHHH
Q psy13052        306 AFIVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLH  385 (533)
Q Consensus       306 v~IVV~p~~~~~~~~~YrV~V~~r~~Vp~FGP~lp~~~Vf~k~~~f~~fLl~KlINae~a~~~s~~Fa~~~~RtR~~lL~  385 (533)
                      |+|||+|..++..+++|+|+|.+|++||+|||++|+++||+++++|++|||+||||||+||++|++|+++++|||+++|+
T Consensus       242 v~IVV~p~~~~~~~~~yrV~v~~k~~vp~fgP~lp~~~v~~k~~~~~~fll~klINae~a~~~s~~f~~~~~RtR~~ll~  321 (341)
T 1srq_A          242 AYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLE  321 (341)
T ss_dssp             EEEEEEEECC----CEEEEEEEECTTSCCCSSCCCTTCEEESSHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCCCCceEEEEEEecCCCCCCCCCCCCCceecCcHHHHHHHHHHHHHHHHHhhcCccccchHHHHHHHHHH
Confidence            99999999887788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccccCCCC
Q psy13052        386 SLCEELKEKTREFLGGEG  403 (533)
Q Consensus       386 ~l~~~~~~~~~~~~g~~~  403 (533)
                      +|+++|++++++|||+++
T Consensus       322 ~i~~~~~~~~~~~~~~~~  339 (341)
T 1srq_A          322 TLYEELHIHSQSMMGLGG  339 (341)
T ss_dssp             HHHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHhhCCCC
Confidence            999999999999999864

>1srq_A RAP1GAP, GTPase-activating protein 1; mixed alpha-beta, signaling protein; 2.90A {Homo sapiens} SCOP: e.55.1.1 PDB: 3brw_A*

Probab=98.99  E-value=1.4e-10  Score=120.24  Aligned_cols=73  Identities=36%  Similarity=0.616  Sum_probs=66.3

Q ss_pred             CCCCccccceeeeEEEecCCCceeEeeeeeeEecccceeehhhhcccCccccccCCCCCCCCh--hHHHhhhccc
Q psy13052        416 GTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASP--QTMARLRTRS  488 (533)
Q Consensus       416 ~~~~~Fl~~~k~~f~g~d~~lg~l~lS~k~e~v~~qe~lRiiLR~r~~t~~~~ip~~~~~~~p--~~~akl~~~~  488 (533)
                      -|+.+|++++|.||+|.|.++|++++|+|.|...+|+++|+|||++++|+|++||++|..+.|  .+|||++|..
T Consensus        15 ~Yr~~F~gk~H~n~~g~d~~lGpvilSi~~e~~~~~~~~r~ilRt~~gt~~~~ip~~~~~~~p~~~~~~k~~~~~   89 (341)
T 1srq_A           15 IYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCED   89 (341)
T ss_dssp             HHHHHTTTSSCEEEEEEETTTEEEEEEEEEEEETTEEEEEEEEECSSCEEEEEEECCCC--CCCHHHHHHHHCTT
T ss_pred             HHHhhCCCCceeeEEEEcCCCCcEEEEEEEeccCCceeEEEEEEcCCccEEEEEEccccccCCCHHHHHHHHhhh
Confidence            478899999999999999999999999999999999999999999999999999999976655  4899999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	533
d1srqa_	336	e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Ra	1e-146
d1srqa_	336	e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Ra	2e-15

>d1srqa_ e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Rap1GAP {Human (Homo sapiens) [TaxId: 9606]} Length = 336

class: Multi-domain proteins (alpha and beta)
fold: Rap/Ran-GAP
superfamily: Rap/Ran-GAP
family: Rap/Ran-GAP
domain: Rap1 GTPase-activating protein 1, Rap1GAP
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  422 bits (1086), Expect = e-146
 Identities = 188/336 (55%), Positives = 241/336 (71%), Gaps = 2/336 (0%)

Query: 70  RSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGT 129
           + K+EC+ TA+ YR+ FLG+EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T
Sbjct: 1   KVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRT 60

Query: 130 VHELLPPNC--ANASPQTMARLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGV 187
            H+++P +C     +   MA+LV E +      PVL P+AS LI  +DEHV+ + FKFGV
Sbjct: 61  YHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGV 120

Query: 188 LYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHKGYRGGLDTQFRQTGEQAVYQ 247
           +YQ+ GQ +EEELF+    SPAF +FL  LGQ++ L+D KG+RGGLD    QTG ++VY 
Sbjct: 121 IYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYC 180

Query: 248 VFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAF 307
            F+ +EIMFHVST LP+TE D QQLQRKRHIGNDIVA+VFQ+ NTPF PDMIAS+FLHA+
Sbjct: 181 NFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAY 240

Query: 308 IVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAY 367
           +VVQ          YKVSVTARDDVPFFGP  P PA+FR   +F+EFLLTKLINAE A Y
Sbjct: 241 VVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACY 300

Query: 368 KAHKFAKLELRTRSSLLHSLCEELKEKTREFLGGEG 403
           KA KFAKLE RTR++LL +L EEL   ++  +G  G
Sbjct: 301 KAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGG 336

>d1srqa_ e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Rap1GAP {Human (Homo sapiens) [TaxId: 9606]} Length = 336

class: Multi-domain proteins (alpha and beta)
fold: Rap/Ran-GAP
superfamily: Rap/Ran-GAP
family: Rap/Ran-GAP
domain: Rap1 GTPase-activating protein 1, Rap1GAP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (184), Expect = 2e-15
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 421 FIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQT 480
           F+  EH N+  +D  LG ++ S K +++G+Q H RLLLR K  T H+++P +C    P  
Sbjct: 17  FLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFP-- 74

Query: 481 MARLRTRSSLLHSLCEELKEK 501
                    +   +CE++   
Sbjct: 75  -----NVVQMAKLVCEDVNVD 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	533
d1srqa_	336	Rap1 GTPase-activating protein 1, Rap1GAP {Human (	100.0
d1srqa_	336	Rap1 GTPase-activating protein 1, Rap1GAP {Human (	98.92

>d1srqa_ e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Rap1GAP {Human (Homo sapiens) [TaxId: 9606]}

class: Multi-domain proteins (alpha and beta)
fold: Rap/Ran-GAP
superfamily: Rap/Ran-GAP
family: Rap/Ran-GAP
domain: Rap1 GTPase-activating protein 1, Rap1GAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-104  Score=810.65  Aligned_cols=334  Identities=56%  Similarity=0.940  Sum_probs=322.8

Q ss_pred             CccccccchhhhHhhhcCCCcceeEEEecCCCCcEEEEEEEeeecCcceEEEEEeccCCeEEEEecCCC--CCCChHHHH
Q psy13052         70 RSKIECDDTAKCYRRFFLGREHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNC--ANASPQTMA  147 (533)
Q Consensus        70 ~~~le~d~~a~~Yrk~F~gkeH~Ny~g~d~~lGpvilSik~e~~~~~~~~RiIlR~k~Gt~~~~ip~~~--~~ps~~~~a  147 (533)
                      ++|||+|++|+||||||+||+|+||+|+|+.+|||+|||++|...++++||+|||+++|++++.||.+|  ..|++.+++
T Consensus         1 ~~~~~~d~~a~~Y~~~F~gk~h~ny~~~d~~lgpv~lSi~~e~~~~~~~~r~ilrtk~~~~~~~ip~~~~~~~~~~~~~~   80 (336)
T d1srqa_           1 KVKLECNPTARIYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMA   80 (336)
T ss_dssp             CCCCCSCGGGGHHHHHTTTSSCEEEEEEETTTEEEEEEEEEEEETTEEEEEEEEECSSCEEEEEEECCCC--CCCHHHHH
T ss_pred             CceeeecCCccHHHHhCCCCccceeEeEcCcCCcEEEEEEEEecCCceeEEEEEEcCCCcEEEEEeccccCCCCCHHHHH
Confidence            468999999999999999999999999999999999999999999999999999999999999999987  678889999


Q ss_pred             HHHhhhcCCCCcccccCchHHHHHHhhcccCcccceeEEEEEEeCCCCCHhHhhcCCCCCHHHHHHHHhcCCeEecCCCC
Q psy13052        148 RLVNEQLTCSSLTPVLCPQASSLIAAYDEHVLVSQFKFGVLYQRHGQITEEELFANKHTSPAFDQFLNLLGQRILLKDHK  227 (533)
Q Consensus       148 k~l~~~l~~~~~~pv~~pk~~~~L~~lDe~~~~~~~KfGVlYvk~GQttEeEIlsN~~~S~~F~eFL~~LG~~V~Lk~~~  227 (533)
                      ++++++++..+|.|+.+|++.++|..||+++++++|||||+|||+||++|+|||+|+++|++|.+||+.|||+|+|++|+
T Consensus        81 ~~~~~~~~~~~~~~~~~p~~~~~l~~lD~~~~~~~~K~GViYvk~GQ~~e~eIl~N~~~S~~F~eFL~~LG~~V~Lk~~~  160 (336)
T d1srqa_          81 KLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFK  160 (336)
T ss_dssp             HHHCTTCCCSCCEECCCTTHHHHHHHHHHTTSCCEEEEEEEEECSSCCSHHHHHCCCSCCHHHHHHHHHHSEEEESTTCC
T ss_pred             HHhhhhhcccccccccChhHHHHHHhhhccccccceEEEEEEecCCCCCHHHHhhCCCCCHHHHHHHHHhCCEEEcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccCCCCCCCEEEEEeecceEEEEEeccCCCCCCCChhhhhhccccCCCeEEEEEeCCCCCCCCCccccccceEE
Q psy13052        228 GYRGGLDTQFRQTGEQAVYQVFKEREIMFHVSTLLPFTENDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAF  307 (533)
Q Consensus       228 gy~GGLD~~~~~tG~~svY~~~~~~EImFHVsTlLP~~~~D~Qql~RKRHIGNDiV~IVf~E~~~~f~p~~I~SqF~hv~  307 (533)
                      ||+||||++++.||++++||+|.++|||||||||||++++|+||++||||||||+|+|||+|++.||+|++|+||||||+
T Consensus       161 gy~GgLD~~~~~tG~~s~Y~~~~~~EImFHVsTllP~~~~D~qq~~kKRHIGND~V~IVf~E~~~~f~~~~I~SqFn~v~  240 (336)
T d1srqa_         161 GFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAY  240 (336)
T ss_dssp             SCCTTCCSSSCTTCSEEEEEECSSCEEEEEEGGGSCCCTTCTTCHHHHHHHTTCSEEEEEESSCCCCCGGGSCCSSCCEE
T ss_pred             CcccCccccCCCCCCEEEEEecCCEEEEEEecccCCCCCCChhhhhhhhccCCCeEEEEEecCCCCcCchhhcccCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCCCCcEEEEEEecCCCCCCCCCCCCCceecCChhhHHHHHHHHhhhhHhhhhchhhhhhHHHHHHHHHHHH
Q psy13052        308 IVVQVIDPNTPNTRYKVSVTARDDVPFFGPNFPQPAIFRADSDFKEFLLTKLINAENAAYKAHKFAKLELRTRSSLLHSL  387 (533)
Q Consensus       308 IVV~p~~~~~~~~~YrV~V~~r~~Vp~FGP~lp~~~Vf~k~~~f~~fLl~KlINae~a~~~s~~Fa~~~~RtR~~lL~~l  387 (533)
                      |||+|+.+++.+.+|||+|.+|++||+|||+||.++||.+++.|++|||+|+||||+||+++++|++++.|||+++|++|
T Consensus       241 IVV~p~~~~~~~~~yrV~V~~k~~vp~fgPpl~~~~v~~~~~~~~~fll~k~INae~a~~~s~~f~~~~~rtR~~~L~~l  320 (336)
T d1srqa_         241 VVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETL  320 (336)
T ss_dssp             EEEEEECC----CEEEEEEEECTTSCCCSSCCCTTCEEESSHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCCCcEEEEEEecCCCCcCCCCCCCCCEecChHHHHHHHHHHHHhHHHHHhhChhhhHHHHHHHHHHHHHH
Confidence            99999987777889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccCCCC
Q psy13052        388 CEELKEKTREFLGGEG  403 (533)
Q Consensus       388 ~~~~~~~~~~~~g~~~  403 (533)
                      +++++.++++|+|+++
T Consensus       321 ~~~~~~~s~~~~g~g~  336 (336)
T d1srqa_         321 YEELHIHSQSMMGLGG  336 (336)
T ss_dssp             HHHHHHHHHHHHTSCC
T ss_pred             HHHhhhcchhhccCCC
Confidence            9999999999999863

>d1srqa_ e.55.1.1 (A:) Rap1 GTPase-activating protein 1, Rap1GAP {Human (Homo sapiens) [TaxId: 9606]}

class: Multi-domain proteins (alpha and beta)
fold: Rap/Ran-GAP
superfamily: Rap/Ran-GAP
family: Rap/Ran-GAP
domain: Rap1 GTPase-activating protein 1, Rap1GAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=9.3e-11  Score=118.58  Aligned_cols=74  Identities=35%  Similarity=0.614  Sum_probs=66.6

Q ss_pred             CCCCccccceeeeEEEecCCCceeEeeeeeeEecccceeehhhhcccCccccccCCCCCCCChh--HHHhhhccch
Q psy13052        416 GTGTRFIDTEHSNFVGVDNELGPVLLSTKTELVGNQSHTRLLLRLKTGTVHELLPPNCANASPQ--TMARLRTRSS  489 (533)
Q Consensus       416 ~~~~~Fl~~~k~~f~g~d~~lg~l~lS~k~e~v~~qe~lRiiLR~r~~t~~~~ip~~~~~~~p~--~~akl~~~~~  489 (533)
                      -|+..|++++|.+++|.|.++|++++|+|.|.+.+|+++|+|||+|.+|+|++||.+|..++|.  +|+|++|...
T Consensus        12 ~Y~~~F~gk~h~ny~~~d~~lgpv~lSi~~e~~~~~~~~r~ilrtk~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~   87 (336)
T d1srqa_          12 IYRKHFLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDV   87 (336)
T ss_dssp             HHHHHTTTSSCEEEEEEETTTEEEEEEEEEEEETTEEEEEEEEECSSCEEEEEEECCCC--CCCHHHHHHHHCTTC
T ss_pred             HHHHhCCCCccceeEeEcCcCCcEEEEEEEEecCCceeEEEEEEcCCCcEEEEEeccccCCCCCHHHHHHHhhhhh
Confidence            4778999999999999999999999999999999999999999999999999999999776655  8999888544