Psyllid ID: psy13131


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
MIPSKGVAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKAR
cccccEEEEcccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccc
cccHHHEEEHEEccccccccccccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHHHHHccccEEEccc
mipskgvafechvppsklngLVIEYNIFWSTFDCFTKIVRNESAVglykgmgapitgvaPIFALSflgygagkkvltnenndkLAHWQYFVagsfsgittaaitapGERIKCLLQIqsnetakvysgpVDVVRKLVRQhgvtsvfkar
MIPSKGVAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKlvrqhgvtsvfkar
MIPSKGVAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKAR
******VAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTS*****
MIPSKGVAFECHVPP***********IFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVL*******LAHWQYFVAGSFSGITTAAITAPGERIKCL****************DVVRKLVRQHGVTSVFKAR
MIPSKGVAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKAR
MIPSKGVAFECHVPPSKL****IEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKA*
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIPSKGVAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKAR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query148 2.2.26 [Sep-21-2011]
Q9VQG4 306 Congested-like trachea pr yes N/A 0.831 0.401 0.5 2e-28
Q9Z2Z6 301 Mitochondrial carnitine/a yes N/A 0.959 0.471 0.413 9e-28
O43772 301 Mitochondrial carnitine/a yes N/A 0.959 0.471 0.413 1e-27
Q8HXY2 301 Mitochondrial carnitine/a N/A N/A 0.959 0.471 0.420 2e-27
P97521 301 Mitochondrial carnitine/a yes N/A 0.959 0.471 0.406 1e-26
Q27257 312 Protein dif-1 OS=Caenorha yes N/A 0.831 0.394 0.396 4e-21
Q08DK7 298 Mitochondrial carnitine/a no N/A 0.790 0.392 0.327 7e-13
Q54FE6 285 Mitochondrial substrate c yes N/A 0.777 0.403 0.310 8e-13
Q12289 327 Mitochondrial carnitine c yes N/A 0.668 0.302 0.385 2e-12
Q10248 298 Uncharacterized mitochond yes N/A 0.797 0.395 0.283 1e-11
>sp|Q9VQG4|COLT_DROME Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1 Back     alignment and function desciption
 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 81/124 (65%), Gaps = 1/124 (0%)

Query: 24  EYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDK 83
           E  ++  TFDC  K ++NE   GLYKGM AP+TGVAPIFA+ F GY  GK++     + K
Sbjct: 53  EQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAK 112

Query: 84  LAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETA-KVYSGPVDVVRKLVRQHGVT 142
           L + Q FVAGSFSG+ +  I APGERIK LLQ Q  +   + Y+G +D   KL ++ G+ 
Sbjct: 113 LTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLR 172

Query: 143 SVFK 146
           SVFK
Sbjct: 173 SVFK 176




Putative mitochondrial carrier of unknown solute specificity. Required for gas-filling of the tracheal system at hatching time of the embryo and for normal epithelial morphogenesis of the wings.
Drosophila melanogaster (taxid: 7227)
>sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|O43772|MCAT_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1 Back     alignment and function description
>sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1 Back     alignment and function description
>sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function description
>sp|Q08DK7|MCATL_BOVIN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1 Back     alignment and function description
>sp|Q54FE6|MCFS_DICDI Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1 Back     alignment and function description
>sp|Q12289|CRC1_YEAST Mitochondrial carnitine carrier OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRC1 PE=1 SV=1 Back     alignment and function description
>sp|Q10248|YD1K_SCHPO Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.20c PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query148
91075930 298 PREDICTED: similar to mitochondrial carn 0.837 0.416 0.56 1e-33
156547917 295 PREDICTED: congested-like trachea protei 0.831 0.416 0.552 3e-32
321460769 299 hypothetical protein DAPPUDRAFT_231481 [ 0.810 0.401 0.528 1e-30
198436902 301 PREDICTED: similar to solute carrier fam 0.817 0.401 0.548 2e-30
307212075181 Congested-like trachea protein [Harpegna 0.804 0.657 0.516 2e-30
322798676181 hypothetical protein SINV_80152 [Solenop 0.817 0.668 0.516 7e-30
256052253 302 mitochondrial carnitine/acylcarnitine ca 0.804 0.394 0.545 2e-29
405960112 296 Mitochondrial carnitine/acylcarnitine ca 0.878 0.439 0.447 3e-29
340724732 296 PREDICTED: congested-like trachea protei 0.844 0.422 0.503 4e-29
196005055 297 hypothetical protein TRIADDRAFT_25969 [T 0.783 0.390 0.483 5e-29
>gi|91075930|ref|XP_967309.1| PREDICTED: similar to mitochondrial carnitine/acylcarnitine carrier protein [Tribolium castaneum] gi|270014645|gb|EFA11093.1| hypothetical protein TcasGA2_TC004690 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/125 (56%), Positives = 87/125 (69%), Gaps = 1/125 (0%)

Query: 24  EYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDK 83
           E  ++  T DC    VRNE   GLYKGMGAP+ GVAPIFA+SF+GYG GKK+    +   
Sbjct: 44  EKPLYSGTLDCLKTTVRNEGIRGLYKGMGAPLLGVAPIFAISFMGYGVGKKIFGPGDGQH 103

Query: 84  LAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETA-KVYSGPVDVVRKLVRQHGVT 142
            ++ QYF AG+FSGI T  I APGERIKCLLQIQ   T  K YSGPVDVV+KL ++ G+ 
Sbjct: 104 YSYLQYFTAGAFSGIFTTTIMAPGERIKCLLQIQQASTGPKTYSGPVDVVKKLYKEGGIR 163

Query: 143 SVFKA 147
           S+++ 
Sbjct: 164 SIYRG 168




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156547917|ref|XP_001604306.1| PREDICTED: congested-like trachea protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|321460769|gb|EFX71808.1| hypothetical protein DAPPUDRAFT_231481 [Daphnia pulex] Back     alignment and taxonomy information
>gi|198436902|ref|XP_002119607.1| PREDICTED: similar to solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Ciona intestinalis] Back     alignment and taxonomy information
>gi|307212075|gb|EFN87958.1| Congested-like trachea protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|322798676|gb|EFZ20280.1| hypothetical protein SINV_80152 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|256052253|ref|XP_002569689.1| mitochondrial carnitine/acylcarnitine carrier protein-related [Schistosoma mansoni] gi|353231218|emb|CCD77636.1| mitochondrial carnitine/acylcarnitine carrier protein-related [Schistosoma mansoni] Back     alignment and taxonomy information
>gi|405960112|gb|EKC26059.1| Mitochondrial carnitine/acylcarnitine carrier protein [Crassostrea gigas] Back     alignment and taxonomy information
>gi|340724732|ref|XP_003400735.1| PREDICTED: congested-like trachea protein-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|196005055|ref|XP_002112394.1| hypothetical protein TRIADDRAFT_25969 [Trichoplax adhaerens] gi|190584435|gb|EDV24504.1| hypothetical protein TRIADDRAFT_25969 [Trichoplax adhaerens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query148
ZFIN|ZDB-GENE-040426-1869 300 slc25a20 "solute carrier famil 0.952 0.47 0.451 3.1e-28
UNIPROTKB|Q3SZA4 301 SLC25A20 "Uncharacterized prot 0.871 0.428 0.473 2.2e-27
FB|FBgn0019830 306 colt "congested-like trachea" 0.831 0.401 0.5 2.2e-27
UNIPROTKB|F1SKK1 301 SLC25A20 "Uncharacterized prot 0.871 0.428 0.466 4.5e-27
UNIPROTKB|E1C175 301 SLC25A20 "Uncharacterized prot 0.810 0.398 0.483 9.4e-27
MGI|MGI:1928738 301 Slc25a20 "solute carrier famil 0.871 0.428 0.458 1.2e-26
UNIPROTKB|O43772 301 SLC25A20 "Mitochondrial carnit 0.871 0.428 0.458 1.5e-26
UNIPROTKB|E2RSN2 301 SLC25A20 "Uncharacterized prot 0.871 0.428 0.458 1.9e-26
ZFIN|ZDB-GENE-090312-157 296 si:dkey-150i13.2 "si:dkey-150i 0.810 0.405 0.466 1.9e-26
UNIPROTKB|B4DWZ5 251 SLC25A20 "Mitochondrial carnit 0.810 0.478 0.458 2.5e-26
ZFIN|ZDB-GENE-040426-1869 slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 65/144 (45%), Positives = 84/144 (58%)

Query:     3 PSKGVAFECHVPPSKLNGLVIEYNIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIF 62
             P   +       P    G V +Y     TFDCF K +  E   GLYKGM API GV P+F
Sbjct:    29 PLDTIKVRLQTQPKPRPGEVAQYA---GTFDCFKKTLAKEGVRGLYKGMAAPIIGVTPMF 85

Query:    63 ALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETA 122
             A+ F G+G GKK+     +D L + Q F AG  SG+ T AI APGERIKCLLQIQ+    
Sbjct:    86 AVCFFGFGLGKKLQQKTPDDILTYPQLFAAGMLSGVFTTAIMAPGERIKCLLQIQAASGQ 145

Query:   123 KVYSGPVDVVRKLVRQHGVTSVFK 146
               Y+GP+D V++L R+ G+  ++K
Sbjct:   146 VKYAGPMDCVKQLYRESGIRGIYK 169


GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
UNIPROTKB|Q3SZA4 SLC25A20 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0019830 colt "congested-like trachea" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1SKK1 SLC25A20 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1C175 SLC25A20 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1928738 Slc25a20 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O43772 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSN2 SLC25A20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090312-157 si:dkey-150i13.2 "si:dkey-150i13.2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|B4DWZ5 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query148
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-13
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-10
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-07
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.001
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 62.3 bits (152), Expect = 1e-13
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 87  WQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFK 146
               +AG  +G   A +T P + +K  LQ  +   ++ Y G +D  +K+ ++ G+  ++K
Sbjct: 6   LASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYK 65


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 148
KOG0764|consensus 299 100.0
KOG0753|consensus317 100.0
KOG0752|consensus320 99.97
KOG0752|consensus 320 99.97
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0768|consensus323 99.97
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.96
KOG0764|consensus299 99.96
KOG0754|consensus 294 99.96
KOG0759|consensus286 99.96
KOG0762|consensus311 99.96
KOG0762|consensus 311 99.96
PTZ00168259 mitochondrial carrier protein; Provisional 99.96
KOG0758|consensus 297 99.96
KOG0754|consensus294 99.96
KOG0753|consensus 317 99.95
KOG0757|consensus 319 99.95
KOG0758|consensus297 99.95
KOG0750|consensus304 99.95
KOG0760|consensus 302 99.95
KOG0749|consensus298 99.95
KOG0760|consensus302 99.95
KOG0751|consensus694 99.94
KOG0757|consensus319 99.94
KOG0759|consensus 286 99.94
KOG0756|consensus299 99.93
KOG0755|consensus320 99.93
PTZ00168 259 mitochondrial carrier protein; Provisional 99.93
KOG0767|consensus 333 99.92
KOG0766|consensus297 99.92
KOG0761|consensus361 99.92
KOG0036|consensus 463 99.91
KOG0765|consensus333 99.91
KOG0763|consensus 301 99.9
KOG0761|consensus 361 99.9
KOG0770|consensus 353 99.89
KOG0766|consensus 297 99.89
KOG0749|consensus 298 99.89
KOG0769|consensus 308 99.89
KOG0765|consensus 333 99.87
KOG0770|consensus353 99.84
KOG0036|consensus463 99.84
KOG0755|consensus 320 99.83
KOG0756|consensus 299 99.82
KOG0763|consensus301 99.82
KOG0768|consensus 323 99.81
KOG0750|consensus 304 99.8
KOG0769|consensus308 99.77
KOG0767|consensus333 99.67
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.56
KOG2745|consensus 321 99.53
KOG2745|consensus321 99.52
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.5
KOG1519|consensus297 99.49
KOG0751|consensus 694 99.34
KOG1519|consensus 297 98.95
KOG2954|consensus427 98.76
KOG2954|consensus427 97.62
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=3.8e-35  Score=202.90  Aligned_cols=146  Identities=26%  Similarity=0.394  Sum_probs=132.5

Q ss_pred             CCCcccceeecCccchhhhhhcc--------cCCCCHHHHHHHHHHhcCcceeccccchhhhcchhHHHHHHHhHHHHHH
Q psy13131          3 PSKGVAFECHVPPSKLNGLVIEY--------NIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKK   74 (148)
Q Consensus         3 ~s~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~   74 (148)
                      +++|+.++++.+|+|+.|+|.|.        +.|+++.+++++|++.||++|||+|+.|++++..+.|++||.+||.+|+
T Consensus        13 ~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~   92 (299)
T KOG0764|consen   13 LSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKS   92 (299)
T ss_pred             hhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHH
Confidence            46788899999999999998874        3699999999999999999999999999999999999999999999999


Q ss_pred             hhhccC-CCCcchHHHHHHHHHHHHhhhhhcCcHHHHHHHHhhccCC-CCccCCCHHHHHHHHHHhhCcccccccC
Q psy13131         75 VLTNEN-NDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNE-TAKVYSGPVDVVRKLVRQHGVTSVFKAR  148 (148)
Q Consensus        75 ~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~q~~~~~-~~~~~~~~~~~~~~i~~~~G~~gl~~G~  148 (148)
                      ++.+.. ....++..++.+++.||+++.++|+|++|+|||++.|... ....|++.++++++|+++||++|||||+
T Consensus        93 ~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rgLY~Gl  168 (299)
T KOG0764|consen   93 FITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRGLYKGL  168 (299)
T ss_pred             HHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHHHHhhh
Confidence            997643 3335888999999999999999999999999999998773 4459999999999999999999999996



>KOG0753|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query148
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-04
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 4/116 (3%) Query: 33 DCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVA 92 +C TKI +++ GLY+G + G+ A F Y K +L + N + + +A Sbjct: 158 NCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV-SWMIA 216 Query: 93 GSFSGITTAAITAPGERIKCLLQIQSNETAK--VYSGPVDVVRKLVRQHGVTSVFK 146 + + + ++ P + ++ + +QS +Y+G VD RK+ + G + FK Sbjct: 217 QTVTAV-AGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFK 271

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query148
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-19
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-14
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 9e-05
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-04
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-17
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-16
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-11
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 81.2 bits (201), Expect = 2e-19
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 2/118 (1%)

Query: 30  STFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQY 89
                   +VR E    LY G+ A +       ++    Y + K+  T   ++       
Sbjct: 49  GVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK-GSEHAGIGSR 107

Query: 90  FVAGSFSGITTAAITAPGERIKCLLQIQSN-ETAKVYSGPVDVVRKLVRQHGVTSVFK 146
            +AGS +G    A+  P + +K   Q Q+     + Y   V+  + + R+ G+  ++K
Sbjct: 108 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWK 165


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query148
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.97
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.97
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.97  E-value=1.3e-32  Score=198.66  Aligned_cols=139  Identities=18%  Similarity=0.214  Sum_probs=123.2

Q ss_pred             ccceeecCccchhhhhhccc-------CCCCHHHHHHHHHHhcCcceeccccchhhhcchhHHHHHHHhHHHHHHhhhcc
Q psy13131          7 VAFECHVPPSKLNGLVIEYN-------IFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNE   79 (148)
Q Consensus         7 v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (148)
                      +.+.++..|.|+.|+++|.+       +|+++++++++|+++||++|||||+.|+++++++..+++|.+||.+|+.+.+.
T Consensus       116 ~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~  195 (303)
T 2lck_A          116 ALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKA  195 (303)
T ss_dssp             HHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred             HHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34456677888888888743       58999999999999999999999999999999999999999999999988764


Q ss_pred             CCCCcchHHHHHHHHHHHHhhhhhcCcHHHHHHHHhhccCCCCccCCCHHHHHHHHHHhhCcccccccC
Q psy13131         80 NNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKAR  148 (148)
Q Consensus        80 ~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~~i~~~~G~~gl~~G~  148 (148)
                      ...+.+....+++|++++++++++++|+|+||+|+|++..   ..|.++++|+++|+++||++|||||+
T Consensus       196 ~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~---~~y~~~~~~~~~i~~~eG~~glyrG~  261 (303)
T 2lck_A          196 NLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL---GQYHSAGHCALTMLRKEGPRAFYKGF  261 (303)
T ss_dssp             TSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS---SSCCSHHHHHHHHHHSSCTHHHHSCC
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc---cccCCHHHHHHHHHHHcChHHhhccH
Confidence            4345567788999999999999999999999999999753   46999999999999999999999996



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 148
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-08
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 49.7 bits (117), Expect = 2e-08
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 81  NDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQ----SNETAKVYSGPVDVVRKLV 136
           +  L+  + F+AG  +   +    AP ER+K LLQ+Q         K Y G +D V ++ 
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 60

Query: 137 RQHGV 141
           ++ G 
Sbjct: 61  KEQGF 65


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query148
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.95
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.92
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.95  E-value=1.1e-28  Score=175.17  Aligned_cols=139  Identities=22%  Similarity=0.364  Sum_probs=119.6

Q ss_pred             cceeecCccchhhhhhcc--------cCCCCHHHHHHHHHHhcCcceeccccchhhhcchhHHHHHHHhHHHHHHhhhcc
Q psy13131          8 AFECHVPPSKLNGLVIEY--------NIFWSTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNE   79 (148)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (148)
                      .+.++..|.|+.+++++.        +++.++.+.+++++++||+++||+|+.++++++++.++++|..||.+|+.+.+.
T Consensus       124 ~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  203 (292)
T d1okca_         124 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP  203 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG
T ss_pred             hHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc
Confidence            345566677777777653        357789999999999999999999999999999999999999999999887643


Q ss_pred             CCCCcchHHHHHHHHHHHHhhhhhcCcHHHHHHHHhhccCC--CCccCCCHHHHHHHHHHhhCcccccccC
Q psy13131         80 NNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNE--TAKVYSGPVDVVRKLVRQHGVTSVFKAR  148 (148)
Q Consensus        80 ~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~q~~~~~--~~~~~~~~~~~~~~i~~~~G~~gl~~G~  148 (148)
                      .  .......++++.+++.++.++++|+|+||+|+|.+...  ....|.++++++++++++||++|||||+
T Consensus       204 ~--~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~  272 (292)
T d1okca_         204 K--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGA  272 (292)
T ss_dssp             G--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTH
T ss_pred             c--ccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccH
Confidence            3  34677888999999999999999999999999998652  2347899999999999999999999995



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure