Psyllid ID: psy13160

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccEEEcccccccccccccccccccccccccEEEEEcccEEEEccccccccccccccccccccccccccccccEEEcccccEEEEEEccccccccccccccccccccccccccccccEEccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccEEEccccEEEEcccccccccccccccccEEEcccccccHHccccccccccccccccEEEEEccccEEEccccccccccccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccccccccccccccccEEEcccccEEEcccccc
Coil and Loop (DISEMBL)
mftaylppypsndslackpnpcdpysscsvysehvamcdpcsgpqapwlphcrpeclcnsdcpfnmafpegdecspnpcgpytgcrvvsgsavcfclpeytgdppsvpctlplnpchnspcgpntqcslldngfaqctclpgyvespntirgcverrqpcepnvcgagavcdpnrapycfcpegtm
Flexible Loop (DISEMBL)
mftaylppypsndslackPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPnvcgagavcdpnRAPYCFCPEGTM
Low Complexity Region (SEG)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM
Disordered region (IsUnstruct)
*********************CDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFC*****
Disordered Region (DISOPRED)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM
Disordered Region (DISEMBL)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM
Disordered Region (DISPRO)
*FTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPE***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFTAYLPPYPSNDSLACKPNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
P13611	3396	Versican core protein OS=	yes	N/A	0.387	0.021	0.389	3e-07
Q9ESC1	738	EGF, latrophilin and seve	yes	N/A	0.559	0.140	0.336	4e-07
Q923X1	739	EGF, latrophilin seven tr	yes	N/A	0.586	0.147	0.327	6e-07
P81282	3381	Versican core protein OS=	yes	N/A	0.387	0.021	0.389	1e-06
Q62059	3357	Versican core protein OS=	no	N/A	0.387	0.021	0.389	1e-06
Q9ERB4	2738	Versican core protein (Fr	no	N/A	0.387	0.026	0.389	2e-06
Q8TDW7	4589	Protocadherin Fat 3 OS=Ho	no	N/A	0.381	0.015	0.363	1e-05
Q9VW71	4705	Fat-like cadherin-related	no	N/A	0.526	0.020	0.272	3e-05
P33450	5147	Cadherin-related tumor su	no	N/A	0.639	0.023	0.270	4e-05
Q8BNA6	4555	Protocadherin Fat 3 OS=Mu	no	N/A	0.381	0.015	0.350	5e-05

>sp|P13611|CSPG2_HUMAN Versican core protein OS=Homo sapiens GN=VCAN PE=1 SV=3

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 68   FPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQC 127
             P  D C  NPC     C     S VC C+P Y+GD     C L  + CH++PC     C
Sbjct: 3087 LPGPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSGD----QCELDFDECHSNPCRNGATC 3142

Query: 128  SLLDNGFAQCTCLPGYV 144
                N F +C CLP YV
Sbjct: 3143 VDGFNTF-RCLCLPSYV 3158

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.
Homo sapiens (taxid: 9606)

>sp|Q9ESC1|ELTD1_RAT EGF, latrophilin and seven transmembrane domain-containing protein 1 OS=Rattus norvegicus GN=Eltd1 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 78  PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH-NSPCGPNTQCSLLDNGFAQ 136
           PC P   C V+   A CFC   YTG+   +     ++ C+  S CG +  C   + GF+ 
Sbjct: 25  PCLPNAKCEVLDEVAACFCSTGYTGN--GITICEDVDECNETSVCGDHAVCENTNGGFS- 81

Query: 137 CTCLPGYVES-------PNTIRGCVERRQPCEPNVCGAGAVCDPNRAPY-CFCPEG 184
           C C+ GY  S       PN    C +  +  E +VCG  AVC+     + CFC EG
Sbjct: 82  CFCVEGYQTSTGKTQFTPNDGSYCQDVDECNETSVCGDHAVCENTNGGFSCFCVEG 137

Could be involved in cardiac development.

Rattus norvegicus (taxid: 10116)

>sp|Q923X1|ELTD1_MOUSE EGF, latrophilin seven transmembrane domain-containing protein 1 OS=Mus musculus GN=Eltd1 PE=2 SV=3

 Score = 53.9 bits (128), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 10/119 (8%)

Query: 74  CSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNG 133
           CS   C P   C V +G   CFC   Y+G+  ++ C        +S CG +  C  ++ G
Sbjct: 22  CSKTTCLPNAKCEVHNGVEACFCSQGYSGNGVTI-CEDIDECSESSVCGDHAVCENVNGG 80

Query: 134 FAQCTCLPGYVE-------SPNTIRGCVERRQPCEPNVCGAGAVCDP-NRAPYCFCPEG 184
           F+ C C  GY         +PN    C +  +  E +VCG  AVC+  N    CFC EG
Sbjct: 81  FS-CFCREGYQTATGKSQFTPNDGSYCQDIDECSESSVCGDHAVCENVNGGFSCFCREG 138

Could be involved in cardiac development.

Mus musculus (taxid: 10090)

>sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCAN PE=1 SV=2

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 68   FPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQC 127
             P  D C  NPC     C     S VC C+P Y+GD     C L  + CH++PC     C
Sbjct: 3072 LPGPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSGD----RCELDFDECHSNPCRNGATC 3127

Query: 128  SLLDNGFAQCTCLPGYV 144
                N F +C CLP YV
Sbjct: 3128 IDGFNTF-RCLCLPSYV 3143

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Bos taurus (taxid: 9913)

>sp|Q62059|CSPG2_MOUSE Versican core protein OS=Mus musculus GN=Vcan PE=1 SV=2

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 68   FPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQC 127
             P  D C  NPC     C     S VC C P Y+GD     C L  + CH++PC     C
Sbjct: 3049 LPGPDLCKTNPCLNGGTCYPTETSYVCTCAPGYSGD----QCELDFDECHSNPCRNGATC 3104

Query: 128  SLLDNGFAQCTCLPGYV 144
                N F +C CLP YV
Sbjct: 3105 VDGFNTF-RCLCLPSYV 3120

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Mus musculus (taxid: 10090)

>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus norvegicus GN=Vcan PE=2 SV=2

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 68   FPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQC 127
             P  D C  NPC     C     S VC C P Y+GD     C L  + CH++PC     C
Sbjct: 2429 LPGPDLCKTNPCLNGGTCYPTETSYVCTCAPGYSGD----QCELDFDECHSNPCRNGATC 2484

Query: 128  SLLDNGFAQCTCLPGYV 144
                N F +C CLP YV
Sbjct: 2485 VDGLNTF-RCLCLPSYV 2500

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Rattus norvegicus (taxid: 10116)

>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 109  CTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAG 168
            C L  + C  SPC     C+ L +G  QCTCL  +     T R C      C PN C  G
Sbjct: 4018 CVLYPDACKRSPCQHGGSCTGLPSGGYQCTCLSQF-----TGRNCESEITACFPNPCRNG 4072

Query: 169  AVCDPNRAPY-CFCPEG 184
              CDP    + C C  G
Sbjct: 4073 GSCDPIGNTFICNCKAG 4089

May play a role in the interactions between neurites derived from specific subsets of neurons during development.

Homo sapiens (taxid: 9606)

>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila melanogaster GN=kug PE=2 SV=2

 Score = 48.1 bits (113), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 12/110 (10%)

Query: 74   CSPNPCGPYTGCRVVSGSAV-CFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDN 132
            C   PC     C+ +      C C P Y+G      C + L+PC + PC    +C     
Sbjct: 4133 CGSQPCANSGICKELDTDVFECACQPRYSGKH----CEIDLDPCSSGPCLFGGRCDYHGP 4188

Query: 133  GFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRA-PYCFC 181
                CTC P ++      + C E  + C PN C  G +C+      +C C
Sbjct: 4189 NNYSCTC-PIHLSG----KRC-EYGKFCTPNPCKNGGICEEGDGISHCMC 4232

Required for the planar polarity of actin filament orientation at the basal side of ovarian follicle cells. Required for proper egg chamber shape; elongation of the egg chamber during oogenesis.

Drosophila melanogaster (taxid: 7227)

>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft PE=1 SV=3

 Score = 48.1 bits (113), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 46/133 (34%), Gaps = 14/133 (10%)

Query: 56   CLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNP 115
            C C S           D C PNPC     CR +     C C     G       +   + 
Sbjct: 3999 CQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEKERS---DV 4055

Query: 116  CHNSPCGPNTQCSLLDNGFAQ-CTCLPGYVESPNTIRG--CVERRQPCEPNVCGAGAVCD 172
            C++ PC     C    +G +  C C PG+       RG  C      C PN C  G +C 
Sbjct: 4056 CYSKPCRNGGSCQRSPDGSSYFCLCRPGF-------RGNQCESVSDSCRPNPCLHGGLCV 4108

Query: 173  PNRAPY-CFCPEG 184
              +  Y C C  G
Sbjct: 4109 SLKPGYKCNCTPG 4121

Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.

Drosophila melanogaster (taxid: 7227)

>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2

 Score = 47.4 bits (111), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 109  CTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAG 168
            C L  + C  SPC     CS L +G  QC+CL  +     T   C      C PN C  G
Sbjct: 4017 CVLYPDACQRSPCLHGGSCSSLPSGGYQCSCLSQF-----TGTNCESEITACFPNPCRNG 4071

Query: 169  AVCDPNRAPY-CFCPEG 184
              CDP    + C C  G
Sbjct: 4072 GSCDPIGNTFVCSCKAG 4088

May play a role in the interactions between neurites derived from specific subsets of neurons during development.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
328714521	16577	PREDICTED: hypothetical protein LOC10016	0.494	0.005	0.793	1e-47
157133855	5644	hypothetical protein AaeL_AAEL012910 [Ae	0.892	0.029	0.567	4e-46
270013391	21117	hypothetical protein TcasGA2_TC011986 [T	0.908	0.008	0.571	5e-45
195117710	7357	GI17886 [Drosophila mojavensis] gi|19391	0.892	0.022	0.545	9e-43
357612664	18906	hypothetical protein KGM_01730 [Danaus p	0.489	0.004	0.694	2e-42
386769088	15105	dumpy, isoform J [Drosophila melanogaste	0.510	0.006	0.685	5e-42
442625922	14825	dumpy, isoform X [Drosophila melanogaste	0.510	0.006	0.685	6e-42
386769086	15638	dumpy, isoform I [Drosophila melanogaste	0.510	0.006	0.685	6e-42
442625918	20404	dumpy, isoform V [Drosophila melanogaste	0.510	0.004	0.685	9e-42
442625928	19560	dumpy, isoform AA [Drosophila melanogast	0.510	0.004	0.685	1e-41

>gi|328714521|ref|XP_003245382.1| PREDICTED: hypothetical protein LOC100166039 [Acyrthosiphon pisum]

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 102/121 (84%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF    PEGDECSPNPCGPY+GCRVV GSAVCFCL EY GDPP  PC LP NPC  SPCG
Sbjct: 4256 PFKSCIPEGDECSPNPCGPYSGCRVVQGSAVCFCLSEYEGDPPITPCRLPTNPCTPSPCG 4315

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQC+LLDNGFA+CTCLPGY+ESPNTIRGCVE++ PCEPN CG  AVCDPNR P CFCP
Sbjct: 4316 PNTQCTLLDNGFAKCTCLPGYIESPNTIRGCVEKKNPCEPNPCGQSAVCDPNRQPSCFCP 4375

Query: 183  E 183
            E
Sbjct: 4376 E 4376

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157133855|ref|XP_001663042.1| hypothetical protein AaeL_AAEL012910 [Aedes aegypti] gi|108870666|gb|EAT34891.1| AAEL012910-PA [Aedes aegypti]

 Score =  189 bits (480), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/185 (56%), Positives = 125/185 (67%), Gaps = 19/185 (10%)

Query: 7    PPYPSNDSLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLC---NSD 61
            P Y  +  L C P  NPCDP + C +     AMC+  +G          P C C    + 
Sbjct: 2487 PGYKGDGRLGCNPPSNPCDP-NPCGLN----AMCEIDAG---------SPVCFCPKGLTG 2532

Query: 62   CPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPC 121
             PF    PEGDEC+PNPCGP TGCR ++G A CFCLPEY G+PP VPC LP NPC  SPC
Sbjct: 2533 NPFKNCIPEGDECTPNPCGPNTGCRKINGQAACFCLPEYEGNPPEVPCKLPHNPCEPSPC 2592

Query: 122  GPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFC 181
            GPNTQC++L NGFA+CTCL GY+ESPNTIRGC+E R PCEPN CG GA+CD +R P C+C
Sbjct: 2593 GPNTQCTILSNGFAKCTCLSGYIESPNTIRGCIEPRNPCEPNPCGFGAICDSSRNPVCYC 2652

Query: 182  PEGTM 186
            PEG++
Sbjct: 2653 PEGSI 2657

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum]

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/182 (57%), Positives = 125/182 (68%), Gaps = 13/182 (7%)

Query: 7    PPYPSNDSLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPF 64
            P Y  N +  C+P  NPCDP + C  +    A+C+   G    + P         +  PF
Sbjct: 7265 PGYEGNPATGCRPPANPCDP-NPCGTH----ALCEIDKGSAVCFCPKGL------TGNPF 7313

Query: 65   NMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPN 124
               FPEGD+CSPNPCGP +GC+VV G AVCFCLPE+ G PP  PC LP NPC+ SPCGPN
Sbjct: 7314 INCFPEGDDCSPNPCGPNSGCKVVGGKAVCFCLPEFEGTPPQTPCALPANPCNPSPCGPN 7373

Query: 125  TQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEG 184
            TQC++L NGFA+CTCLPGY+ESPNTIRGCVE + PCEPN CG GA+CDP R P C+CP G
Sbjct: 7374 TQCTILSNGFAKCTCLPGYLESPNTIRGCVEPKNPCEPNTCGQGALCDPLREPACYCPYG 7433

Query: 185  TM 186
            T+
Sbjct: 7434 TV 7435

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195117710|ref|XP_002003390.1| GI17886 [Drosophila mojavensis] gi|193913965|gb|EDW12832.1| GI17886 [Drosophila mojavensis]

 Score =  178 bits (451), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 101/185 (54%), Positives = 119/185 (64%), Gaps = 19/185 (10%)

Query: 7    PPYPSNDSLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLC---NSD 61
            P Y  N  + C P  NPCDP              +PC       L +  P C C    + 
Sbjct: 4129 PGYNGNPEVGCSPPQNPCDP--------------NPCGLNAQCELDNGNPICFCPKGLTG 4174

Query: 62   CPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPC 121
             PF    PEGDEC+PNPCGP +GCR V+G+ VCFCLPEY G PP +PC LP NPC  SPC
Sbjct: 4175 NPFKNCIPEGDECTPNPCGPNSGCRRVNGAPVCFCLPEYEGQPPQIPCELPTNPCEPSPC 4234

Query: 122  GPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFC 181
            GPNTQC++L NGF++CTCLPGYVESPNTIRGCVE   PCEPN CG GA+CD +R P C+C
Sbjct: 4235 GPNTQCAVLSNGFSKCTCLPGYVESPNTIRGCVEPINPCEPNPCGTGAICDSSRQPVCYC 4294

Query: 182  PEGTM 186
            P+  +
Sbjct: 4295 PDNKI 4299

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612664|gb|EHJ68109.1| hypothetical protein KGM_01730 [Danaus plexippus]

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 97/121 (80%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF +  PEG+ECSPNPCGP+TGCR+++    CFCLP Y G+PP  PC LP NPC  SPCG
Sbjct: 5104 PFKICIPEGNECSPNPCGPFTGCRIINNKPACFCLPNYEGNPPQQPCKLPNNPCQPSPCG 5163

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQC++L NGFA+CTCL G+VESPNT+RGCVE R PCEPN CG GA CDPNR P C+CP
Sbjct: 5164 PNTQCTILSNGFAKCTCLQGFVESPNTVRGCVEVRNPCEPNPCGIGARCDPNRTPSCYCP 5223

Query: 183  E 183
            E
Sbjct: 5224 E 5224

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769088|ref|NP_001245876.1| dumpy, isoform J [Drosophila melanogaster] gi|383291324|gb|AFH03552.1| dumpy, isoform J [Drosophila melanogaster]

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 98/124 (79%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF    PEGDEC+PNPCGP +GCR V G+ VCFCLPEY G PPS+PC LP NPC  SPCG
Sbjct: 8766 PFKNCIPEGDECTPNPCGPNSGCRRVGGNPVCFCLPEYEGQPPSIPCELPSNPCDPSPCG 8825

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQCS+L NGF++CTCLP YVESPNTIRGCVE   PC+PN CG GA+CD +R P C+CP
Sbjct: 8826 PNTQCSVLSNGFSKCTCLPNYVESPNTIRGCVEPINPCDPNPCGTGAICDSSRHPVCYCP 8885

Query: 183  EGTM 186
            +  +
Sbjct: 8886 DNKI 8889

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625922|ref|NP_001260039.1| dumpy, isoform X [Drosophila melanogaster] gi|440213324|gb|AGB92575.1| dumpy, isoform X [Drosophila melanogaster]

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 98/124 (79%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF    PEGDEC+PNPCGP +GCR V G+ VCFCLPEY G PPS+PC LP NPC  SPCG
Sbjct: 8486 PFKNCIPEGDECTPNPCGPNSGCRRVGGNPVCFCLPEYEGQPPSIPCELPSNPCDPSPCG 8545

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQCS+L NGF++CTCLP YVESPNTIRGCVE   PC+PN CG GA+CD +R P C+CP
Sbjct: 8546 PNTQCSVLSNGFSKCTCLPNYVESPNTIRGCVEPINPCDPNPCGTGAICDSSRHPVCYCP 8605

Query: 183  EGTM 186
            +  +
Sbjct: 8606 DNKI 8609

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769086|ref|NP_001245875.1| dumpy, isoform I [Drosophila melanogaster] gi|383291323|gb|AFH03551.1| dumpy, isoform I [Drosophila melanogaster]

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 98/124 (79%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF    PEGDEC+PNPCGP +GCR V G+ VCFCLPEY G PPS+PC LP NPC  SPCG
Sbjct: 8766 PFKNCIPEGDECTPNPCGPNSGCRRVGGNPVCFCLPEYEGQPPSIPCELPSNPCDPSPCG 8825

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQCS+L NGF++CTCLP YVESPNTIRGCVE   PC+PN CG GA+CD +R P C+CP
Sbjct: 8826 PNTQCSVLSNGFSKCTCLPNYVESPNTIRGCVEPINPCDPNPCGTGAICDSSRHPVCYCP 8885

Query: 183  EGTM 186
            +  +
Sbjct: 8886 DNKI 8889

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625918|ref|NP_001260037.1| dumpy, isoform V [Drosophila melanogaster] gi|440213322|gb|AGB92573.1| dumpy, isoform V [Drosophila melanogaster]

 Score =  175 bits (443), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 98/124 (79%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF    PEGDEC+PNPCGP +GCR V G+ VCFCLPEY G PPS+PC LP NPC  SPCG
Sbjct: 6221 PFKNCIPEGDECTPNPCGPNSGCRRVGGNPVCFCLPEYEGQPPSIPCELPSNPCDPSPCG 6280

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQCS+L NGF++CTCLP YVESPNTIRGCVE   PC+PN CG GA+CD +R P C+CP
Sbjct: 6281 PNTQCSVLSNGFSKCTCLPNYVESPNTIRGCVEPINPCDPNPCGTGAICDSSRHPVCYCP 6340

Query: 183  EGTM 186
            +  +
Sbjct: 6341 DNKI 6344

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625928|ref|NP_001260042.1| dumpy, isoform AA [Drosophila melanogaster] gi|440213327|gb|AGB92578.1| dumpy, isoform AA [Drosophila melanogaster]

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 98/124 (79%)

Query: 63   PFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG 122
            PF    PEGDEC+PNPCGP +GCR V G+ VCFCLPEY G PPS+PC LP NPC  SPCG
Sbjct: 8766 PFKNCIPEGDECTPNPCGPNSGCRRVGGNPVCFCLPEYEGQPPSIPCELPSNPCDPSPCG 8825

Query: 123  PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCP 182
            PNTQCS+L NGF++CTCLP YVESPNTIRGCVE   PC+PN CG GA+CD +R P C+CP
Sbjct: 8826 PNTQCSVLSNGFSKCTCLPNYVESPNTIRGCVEPINPCDPNPCGTGAICDSSRHPVCYCP 8885

Query: 183  EGTM 186
            +  +
Sbjct: 8886 DNKI 8889

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.892	7.545	0.569	9.4e-53
UNIPROTKB|J9PA37	1672	NOTCH4 "Uncharacterized protei	0.817	0.090	0.317	7.8e-13
UNIPROTKB|F1PLX4	1822	NOTCH4 "Uncharacterized protei	0.817	0.083	0.317	8.6e-13
WB|WBGene00007170	1183	B0393.5 [Caenorhabditis elegan	0.672	0.105	0.340	1.4e-12
UNIPROTKB|A5A8X3	1994	NOTCH4 "Uncharacterized protei	0.817	0.076	0.311	2e-12
UNIPROTKB|B0S882	2002	NOTCH4 "Notch 4 intracellular	0.817	0.075	0.293	3.3e-12
UNIPROTKB|Q99466	2003	NOTCH4 "Neurogenic locus notch	0.817	0.075	0.293	3.3e-12
UNIPROTKB|Q5SPL1	2003	NOTCH4 "Notch 4 intracellular	0.817	0.075	0.293	3.3e-12
UNIPROTKB|Q5STG5	2005	NOTCH4 "Notch 4 intracellular	0.817	0.075	0.293	3.3e-12
UNIPROTKB|F1P3N1	1259	Gga.53999 "Uncharacterized pro	0.790	0.116	0.3	5e-12

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 573 (206.8 bits), Expect = 9.4e-53, P = 9.4e-53
 Identities = 102/179 (56%), Positives = 125/179 (69%)

Query:     7 PPYPSNDSLACKP--NPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPF 64
             P Y  N  + C P  +PCDP + C +     A+C+  +G   P + +C P+ L  +  PF
Sbjct:  8719 PGYNGNPKVGCSPPQDPCDP-NPCGLN----ALCELDNGN--P-ICYC-PKGLTGN--PF 8767

Query:    65 NMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPN 124
                 PEGDEC+PNPCGP +GCR V G+ VCFCLPEY G PPS+PC LP NPC  SPCGPN
Sbjct:  8768 KNCIPEGDECTPNPCGPNSGCRRVGGNPVCFCLPEYEGQPPSIPCELPSNPCDPSPCGPN 8827

Query:   125 TQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPE 183
             TQCS+L NGF++CTCLP YVESPNTIRGCVE   PC+PN CG GA+CD +R P C+CP+
Sbjct:  8828 TQCSVLSNGFSKCTCLPNYVESPNTIRGCVEPINPCDPNPCGTGAICDSSRHPVCYCPD 8886

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|J9PA37 NOTCH4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 185 (70.2 bits), Expect = 7.8e-13, P = 7.8e-13
 Identities = 53/167 (31%), Positives = 65/167 (38%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC           E DEC+  P
Sbjct:   334 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGQFCEVETDECASAP 392

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C     C     S +C CLP +TG      C   +N C +SPC    QC      F  C 
Sbjct:   393 CLNQADCHDGLNSFLCVCLPGFTGSQ----CEEDINECASSPCANGGQCQDQPGSF-HCE 447

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P+    C      C    C  GA C D   A  C CP G
Sbjct:   448 CLPGF-EGPH----CQAEVDECLSGPCPTGASCLDLPGAFSCLCPSG 489

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1PLX4 NOTCH4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 185 (70.2 bits), Expect = 8.6e-13, P = 8.6e-13
 Identities = 53/167 (31%), Positives = 65/167 (38%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC           E DEC+  P
Sbjct:   457 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGQFCEVETDECASAP 515

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C     C     S +C CLP +TG      C   +N C +SPC    QC      F  C 
Sbjct:   516 CLNQADCHDGLNSFLCVCLPGFTGSQ----CEEDINECASSPCANGGQCQDQPGSF-HCE 570

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P+    C      C    C  GA C D   A  C CP G
Sbjct:   571 CLPGF-EGPH----CQAEVDECLSGPCPTGASCLDLPGAFSCLCPSG 612

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00007170 B0393.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 47/138 (34%), Positives = 62/138 (44%)

Query:    55 ECLCNSDCPFNMAFPEG-DECS--PNPCG-PYTGCRVVS--GSAVCFCLPEYTGDPPSVP 108
             EC C+    F     E  DEC   P  CG P  G + ++  G+  C C   Y GDP S  
Sbjct:   504 ECTCHGGYRFEDGKCEDVDECRELPKICGDPNKGTKCINKDGTFECLCKDGYEGDPSS-E 562

Query:   109 CTLPLNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGA 167
             C   +N C N   CGPN+QC+    G+ +C CL G+         C +R + C    C  
Sbjct:   563 CR-DVNECKNPDACGPNSQCTNTQGGY-ECECLAGFERIAEGAH-CTDRDE-CAVEPCHP 618

Query:   168 GAVCDPNRAPY-CFCPEG 184
              A+C   R  Y C C +G
Sbjct:   619 AAICSNTRGSYKCECRDG 636

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A5A8X3 NOTCH4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 182 (69.1 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 52/167 (31%), Positives = 66/167 (39%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC       +   E DEC+  P
Sbjct:   461 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGRLCEVETDECASAP 519

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C     C  +     C C P +TG  P   C   +N C +SPC    QC      F  C 
Sbjct:   520 CLNQADCHDLPNGFRCVCQPGFTG--PR--CEEDINECRSSPCANGGQCQDQPGSF-HCE 574

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P     C      C  + C +GA C D   A  C CP G
Sbjct:   575 CLPGF-EGPR----CQTEVDECLSSPCPSGASCLDLPGAFLCLCPSG 616

GO:0030879 "mammary gland development" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|B0S882 NOTCH4 "Notch 4 intracellular domain" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 49/167 (29%), Positives = 67/167 (40%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC       +   E +EC+  P
Sbjct:   462 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGQLCEVETNECASAP 520

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C  +  C  +     C CLP ++G      C   ++ C +SPC    QC      F  C 
Sbjct:   521 CLNHADCHDLLNGFQCICLPGFSG----TRCEEDIDECRSSPCANGGQCQDQPGAF-HCK 575

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P     C      C  + C  GA C D   A +C CP G
Sbjct:   576 CLPGF-EGPR----CQTEVDECLSDPCPVGASCLDLPGAFFCLCPSG 617

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

UNIPROTKB|Q99466 NOTCH4 "Neurogenic locus notch homolog protein 4" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 49/167 (29%), Positives = 67/167 (40%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC       +   E +EC+  P
Sbjct:   463 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGQLCEVETNECASAP 521

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C  +  C  +     C CLP ++G      C   ++ C +SPC    QC      F  C 
Sbjct:   522 CLNHADCHDLLNGFQCICLPGFSG----TRCEEDIDECRSSPCANGGQCQDQPGAF-HCK 576

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P     C      C  + C  GA C D   A +C CP G
Sbjct:   577 CLPGF-EGPR----CQTEVDECLSDPCPVGASCLDLPGAFFCLCPSG 618

GO:0001886 "endothelial cell morphogenesis" evidence=IEA

GO:0001763 "morphogenesis of a branching structure" evidence=ISS

GO:0009790 "embryo development" evidence=ISS

GO:0001569 "patterning of blood vessels" evidence=ISS

GO:0045602 "negative regulation of endothelial cell differentiation" evidence=ISS

GO:0004872 "receptor activity" evidence=TAS

GO:0030154 "cell differentiation" evidence=NAS

GO:0045596 "negative regulation of cell differentiation" evidence=NAS

GO:0009986 "cell surface" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0005509 "calcium ion binding" evidence=TAS

GO:0001709 "cell fate determination" evidence=TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=TAS

GO:0046982 "protein heterodimerization activity" evidence=TAS

GO:0005634 "nucleus" evidence=TAS

GO:0030097 "hemopoiesis" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0030879 "mammary gland development" evidence=IDA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS

GO:0007219 "Notch signaling pathway" evidence=TAS

GO:0007220 "Notch receptor processing" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0007221 "positive regulation of transcription of Notch receptor target" evidence=TAS

UNIPROTKB|Q5SPL1 NOTCH4 "Notch 4 intracellular domain" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 49/167 (29%), Positives = 67/167 (40%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC       +   E +EC+  P
Sbjct:   463 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGQLCEVETNECASAP 521

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C  +  C  +     C CLP ++G      C   ++ C +SPC    QC      F  C 
Sbjct:   522 CLNHADCHDLLNGFQCICLPGFSG----TRCEEDIDECRSSPCANGGQCQDQPGAF-HCK 576

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P     C      C  + C  GA C D   A +C CP G
Sbjct:   577 CLPGF-EGPR----CQTEVDECLSDPCPVGASCLDLPGAFFCLCPSG 618

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

UNIPROTKB|Q5STG5 NOTCH4 "Notch 4 intracellular domain" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 49/167 (29%), Positives = 67/167 (40%)

Query:    22 CDP-YSSCSVYSEH-VAMCDPCSGPQAPWLPHCRP-ECLCNSDCPFNMAFPEGDECSPNP 78
             C P Y+     ++H   +  PC  P +  L       CLC       +   E +EC+  P
Sbjct:   465 CPPGYTGSRCEADHNECLSQPCH-PGSTCLDLLATFHCLCPPGLEGQLCEVETNECASAP 523

Query:    79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCT 138
             C  +  C  +     C CLP ++G      C   ++ C +SPC    QC      F  C 
Sbjct:   524 CLNHADCHDLLNGFQCICLPGFSG----TRCEEDIDECRSSPCANGGQCQDQPGAF-HCK 578

Query:   139 CLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
             CLPG+ E P     C      C  + C  GA C D   A +C CP G
Sbjct:   579 CLPGF-EGPR----CQTEVDECLSDPCPVGASCLDLPGAFFCLCPSG 620

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0050793 "regulation of developmental process" evidence=IEA

UNIPROTKB|F1P3N1 Gga.53999 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 176 (67.0 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 51/170 (30%), Positives = 74/170 (43%)

Query:     7 PPYPSNDSLACKPNPCDPYSSCS-VYSEHVAMC---DPCSGPQAPWLPHCRPE-----CL 57
             P Y  NDS +C  +PC+   SC  + + +  +C   D C+         CR       C 
Sbjct:     3 PSYSENDS-SCSSSPCENGGSCKDLEAGYQCICHNIDECASNPCQNGAICRDRVNEYSCF 61

Query:    58 CNSDCP-FNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPC 116
             C      +N    + +EC+  PC     C       +C C+P YTG    V C   ++ C
Sbjct:    62 CVPGFQGYNCEI-DINECASRPCKNNGTCLNEMDHYLCKCIPGYTG----VNCEAEIDEC 116

Query:   117 HNSPCGPNTQCSLLDN-GFAQCTCLPGY--VESPNTIRGCVERRQPCEPN 163
              + PC     CS  D+ GF  CTC+PGY  ++    I  C+   QPC+ N
Sbjct:   117 DSYPCQNGALCS--DHIGFYTCTCMPGYQGIQCEVDINECIS--QPCQHN 162

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
KOG1214|consensus	1289		99.61
KOG1219|consensus	4289		99.58
KOG1219|consensus	4289		99.58
KOG4289|consensus	2531		99.32
KOG1214|consensus	1289		99.31
KOG1217|consensus	487		99.1
KOG4289|consensus	2531		99.08
KOG1217|consensus	487		98.67
KOG1225|consensus	525		98.65
KOG1225|consensus	525		98.48
KOG4260|consensus	350		98.45
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.33
KOG4260|consensus	350		98.17
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.98
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.82
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.8
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.69
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.66
PF12662	24	cEGF: Complement Clr-like EGF-like	97.62
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.43
PF12662	24	cEGF: Complement Clr-like EGF-like	97.4
KOG1226|consensus	783		97.36
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.28
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.21
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.2
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.75
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.69
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.68
smart00181	35	EGF Epidermal growth factor-like domain.	96.57
smart00181	35	EGF Epidermal growth factor-like domain.	96.44
KOG1226|consensus	783		96.39
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.84
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.82
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.38
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	93.62
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	93.5
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	92.65
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	92.1
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	89.53
KOG0994|consensus	1758		88.98
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	88.32
KOG0994|consensus	1758		82.28
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	81.65

>KOG1214|consensus

Probab=99.61  E-value=1.2e-14  Score=116.12  Aligned_cols=128  Identities=28%  Similarity=0.660  Sum_probs=100.1

Q ss_pred             ceeeCCCCCC--CCCccCCCCCCCC--CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcC-----CCCCCCC--CCCC
Q psy13160         54 PECLCNSDCP--FNMAFPEGDECSP--NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTL-----PLNPCHN--SPCG  122 (186)
Q Consensus        54 ~~C~C~~g~~--~~~c~~~~~~C~~--~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~-----~~~~C~~--~~C~  122 (186)
                      |.|.|..||.  ++.|. ++++|..  ..|+..++|++.+++|.|.|..+|....++.+|..     .++.|..  ..|.
T Consensus       716 ~tcecs~g~~gdgr~c~-d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~  794 (1289)
T KOG1214|consen  716 YTCECSSGYQGDGRNCV-DENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCA  794 (1289)
T ss_pred             eEEEEeeccCCCCCCCC-ChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccC
Confidence            6778888998  67784 8888874  45999999999999999999998876655546652     2344542  3465


Q ss_pred             CCC--eeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        123 PNT--QCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       123 ~~~--~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ..+  .|+...++.+.|.|.|||.|+   |..|. ++|+|.++-|+..+.|+|+ +++.|.|.+||.
T Consensus       795 i~g~a~c~~hGgs~y~C~CLPGfsGD---G~~c~-dvDeC~psrChp~A~CyntpgsfsC~C~pGy~  857 (1289)
T KOG1214|consen  795 IAGQARCVHHGGSTYSCACLPGFSGD---GHQCT-DVDECSPSRCHPAATCYNTPGSFSCRCQPGYY  857 (1289)
T ss_pred             cCCceEEEecCCceEEEeecCCccCC---ccccc-cccccCccccCCCceEecCCCcceeecccCcc
Confidence            444  455555543399999999998   67884 8999999999999999999 999999999984

>KOG1219|consensus

Probab=99.58  E-value=5.2e-15  Score=127.29  Aligned_cols=105  Identities=35%  Similarity=0.843  Sum_probs=97.2

Q ss_pred             CCCCCCCCCCCCeeeecC-CCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCC
Q psy13160         72 DECSPNPCGPYTGCRVVS-GSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTI  150 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~-~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~  150 (186)
                      +.|..+||.+++.|...+ +.|.|.|++.|.|.    .|+.+++.|.++||..+++|+...++| .|.|+.||+|.    
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~----~CEi~~epC~snPC~~GgtCip~~n~f-~CnC~~gyTG~---- 3935 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGN----HCEIDLEPCASNPCLTGGTCIPFYNGF-LCNCPNGYTGK---- 3935 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCc----ccccccccccCCCCCCCCEEEecCCCe-eEeCCCCccCc----
Confidence            778889999999999877 68999999999999    998889999999999999999999999 99999999976    


Q ss_pred             CCCccC-CCCCCCCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        151 RGCVER-RQPCEPNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       151 ~~c~~~-~~~C~~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                       .|+.+ +++|..++|..+|.|.|. |+|.|.|.+||.
T Consensus      3936 -~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~ 3972 (4289)
T KOG1219|consen 3936 -RCEARGISECSKNVCGTGGQCINIPGSFHCNCTPGIL 3972 (4289)
T ss_pred             -eeecccccccccccccCCceeeccCCceEeccChhHh
Confidence             78777 899999999999999999 899999999874

>KOG1219|consensus

Probab=99.58  E-value=1.1e-14  Score=125.47  Aligned_cols=113  Identities=27%  Similarity=0.551  Sum_probs=100.9

Q ss_pred             CCCCCCCCCCCCCCCCCCeecc--CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCCCCCCCCCCCCCCeee
Q psy13160          9 YPSNDSLACKPNPCDPYSSCSV--YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCR   86 (186)
Q Consensus         9 ~~~~~~~~c~~~~C~~~~~C~~--~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~   86 (186)
                      .|..-.+.|..+||.++|.|..  .|.|.|.                    |++.|+|..|+.++.+|.++||..+++|+
T Consensus      3859 gC~l~~d~C~~npCqhgG~C~~~~~ggy~Ck--------------------CpsqysG~~CEi~~epC~snPC~~GgtCi 3918 (4289)
T KOG1219|consen 3859 GCSLLTDPCNDNPCQHGGTCISQPKGGYKCK--------------------CPSQYSGNHCEIDLEPCASNPCLTGGTCI 3918 (4289)
T ss_pred             cccccccccccCcccCCCEecCCCCCceEEe--------------------CcccccCcccccccccccCCCCCCCCEEE
Confidence            3544348899999999999998  5566665                    45589999999999999999999999999


Q ss_pred             ecCCCeEeeCCCCCcCCCCCCCCcCC-CCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160         87 VVSGSAVCFCLPEYTGDPPSVPCTLP-LNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus        87 ~~~~~~~C~c~~g~~~~~~~~~c~~~-~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ...+.|.|.|+.||+|.    .|+.+ +++|..++|.+++.|++..|+| +|-|.+||.|.
T Consensus      3919 p~~n~f~CnC~~gyTG~----~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf-~CncT~g~~gr 3974 (4289)
T KOG1219|consen 3919 PFYNGFLCNCPNGYTGK----RCEARGISECSKNVCGTGGQCINIPGSF-HCNCTPGILGR 3974 (4289)
T ss_pred             ecCCCeeEeCCCCccCc----eeecccccccccccccCCceeeccCCce-EeccChhHhcc
Confidence            99999999999999999    99866 8999999999999999999999 99999999875

>KOG4289|consensus

Probab=99.32  E-value=1.8e-12  Score=108.64  Aligned_cols=85  Identities=34%  Similarity=0.899  Sum_probs=76.7

Q ss_pred             CCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCC--CCCCCCCCC
Q psy13160         90 GSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQ--PCEPNVCGA  167 (186)
Q Consensus        90 ~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~--~C~~~~C~~  167 (186)
                      +.+.|.|++||+++    .|+..+|.|.++||.+++.|....++| .|.|.+||+|.     .|+.++.  .|.+..|.+
T Consensus      1220 nglrCrCPpGFTgd----~CeTeiDlCYs~pC~nng~C~srEggY-tCeCrpg~tGe-----hCEvs~~agrCvpGvC~n 1289 (2531)
T KOG4289|consen 1220 NGLRCRCPPGFTGD----YCETEIDLCYSGPCGNNGRCRSREGGY-TCECRPGFTGE-----HCEVSARAGRCVPGVCKN 1289 (2531)
T ss_pred             CceeEeCCCCCCcc----cccchhHhhhcCCCCCCCceEEecCce-eEEecCCcccc-----ceeeecccCccccceecC
Confidence            45899999999999    998899999999999999999999999 99999999986     7866543  688999999


Q ss_pred             CCeecCC--CCCeeeCCCC
Q psy13160        168 GAVCDPN--RAPYCFCPEG  184 (186)
Q Consensus       168 ~~~C~~~--~~~~C~C~~g  184 (186)
                      +++|++.  |++.|.|+.|
T Consensus      1290 ggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1290 GGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             CCEEeecCCCceeccCCCc
Confidence            9999987  7899999986

>KOG1214|consensus

Probab=99.31  E-value=1e-11  Score=99.75  Aligned_cols=119  Identities=25%  Similarity=0.586  Sum_probs=86.3

Q ss_pred             CCCCCCCCC--CCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCC--CCCccC-----CCCCCCC--C
Q psy13160         10 PSNDSLACK--PNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCP--FNMAFP-----EGDECSP--N   77 (186)
Q Consensus        10 ~~~~~~~c~--~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~--~~~c~~-----~~~~C~~--~   77 (186)
                      ...|+++|.  .+.|+.+++|+| +++|.|+|..                  --.|.  +.+|..     .++.|..  .
T Consensus       730 ~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~------------------gy~F~dd~~tCV~i~~pap~n~Ce~g~h  791 (1289)
T KOG1214|consen  730 NCVDENECATGFHRCGPNSVCINLPGSYRCECRS------------------GYEFADDRHTCVLITPPAPANPCEDGSH  791 (1289)
T ss_pred             CCCChhhhccCCCCCCCCceeecCCCceeEEEee------------------cceeccCCcceEEecCCCCCCccccCcc
Confidence            446888996  455999999999 9999998764                  00111  122321     1233332  2


Q ss_pred             CCCC--CCeeeecC-CCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160         78 PCGP--YTGCRVVS-GSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus        78 ~c~~--~~~C~~~~-~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      .|.-  .+.|+... ++|.|.|.+||.|.+.  .|. ++|+|.++.|+..++|.++.+++ .|+|.+||.|+   |..|
T Consensus       792 ~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~--~c~-dvDeC~psrChp~A~Cyntpgsf-sC~C~pGy~GD---Gf~C  863 (1289)
T KOG1214|consen  792 TCAIAGQARCVHHGGSTYSCACLPGFSGDGH--QCT-DVDECSPSRCHPAATCYNTPGSF-SCRCQPGYYGD---GFQC  863 (1289)
T ss_pred             ccCcCCceEEEecCCceEEEeecCCccCCcc--ccc-cccccCccccCCCceEecCCCcc-eeecccCccCC---Ccee
Confidence            2332  24555444 5799999999999876  787 88999999999999999999999 99999999997   5666

>KOG1217|consensus

Probab=99.10  E-value=6e-09  Score=82.49  Aligned_cols=175  Identities=26%  Similarity=0.582  Sum_probs=122.9

Q ss_pred             CCCCCCCCCCCCCCCC--CCCCCCCCeecc-CCCeeEecCC------CCCC-------------------CCCCCC----
Q psy13160          3 TAYLPPYPSNDSLACK--PNPCDPYSSCSV-YSEHVAMCDP------CSGP-------------------QAPWLP----   50 (186)
Q Consensus         3 ~~~~~~~~~~~~~~c~--~~~C~~~~~C~~-~~~~~C~C~~------c~~~-------------------~~~C~~----   50 (186)
                      .+|.+..+..+.++|.  ..+|.+.+.|.+ .++|.|.|..      +...                   ...|..    
T Consensus       158 ~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~  237 (487)
T KOG1217|consen  158 EGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVE  237 (487)
T ss_pred             CCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCccccccc
Confidence            4566666666557886  445988999999 8889999987      3321                   111111    


Q ss_pred             -----C-Cc-----ceeeCCCCCCCCC--ccCCCCCCCCCC-CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCC
Q psy13160         51 -----H-CR-----PECLCNSDCPFNM--AFPEGDECSPNP-CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPC  116 (186)
Q Consensus        51 -----~-C~-----~~C~C~~g~~~~~--c~~~~~~C~~~~-c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C  116 (186)
                           . |.     +.|.+..||.+..  ...++++|.... |.+++.|++..+.|.|.|.++|.+... ..+. +..+|
T Consensus       238 ~~~~~~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~-~~~~-~~~~C  315 (487)
T KOG1217|consen  238 CASGDGTCVNTVGSYTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLC-TECV-DVDEC  315 (487)
T ss_pred             ccCCCCcccccCCceeeeCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCC-cccc-ccccc
Confidence                 2 22     6888899999775  223678887654 888899999888899999999999832 1122 44566


Q ss_pred             C----CCCCCCCCee--eeCCCCeeeeeCCCCCccCCCCCCCCccCC-CCCCCCCCCCCCeecC-C-CCCeeeCCCCCC
Q psy13160        117 H----NSPCGPNTQC--SLLDNGFAQCTCLPGYVESPNTIRGCVERR-QPCEPNVCGAGAVCDP-N-RAPYCFCPEGTM  186 (186)
Q Consensus       117 ~----~~~C~~~~~C--~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~-~~C~~~~C~~~~~C~~-~-~~~~C~C~~g~~  186 (186)
                      .    ..+|..+..|  ....+.+ .|.|.++|.+     ..|+ .. ++|...++..++.|.+ . ++|+|.|+.+|.
T Consensus       316 ~~~~~~~~c~~g~~C~~~~~~~~~-~C~c~~~~~g-----~~C~-~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~  387 (487)
T KOG1217|consen  316 SPRNAGGPCANGGTCNTLGSFGGF-RCACGPGFTG-----RRCE-DSNDECASSPCCPGGTCVNETPGSYRCACPAGFA  387 (487)
T ss_pred             cccccCCcCCCCcccccCCCCCCC-CcCCCCCCCC-----Cccc-cCCccccCCccccCCEeccCCCCCeEecCCCccc
Confidence            3    3457776677  3334456 7999998655     4785 44 4898777888899998 5 789999999873

>KOG4289|consensus

Probab=99.08  E-value=2.4e-10  Score=96.43  Aligned_cols=84  Identities=32%  Similarity=0.699  Sum_probs=75.4

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCC--CCCCCCCCCCCCeeeeCC
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPL--NPCHNSPCGPNTQCSLLD  131 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~--~~C~~~~C~~~~~C~~~~  131 (186)
                      +.|.|++||+|..|+.++|.|-+.||.+++.|....+.|.|.|.++|+|.    .|+.+.  -.|.++.|.++++|++..
T Consensus      1222 lrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGe----hCEvs~~agrCvpGvC~nggtC~~~~ 1297 (2531)
T KOG4289|consen 1222 LRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGE----HCEVSARAGRCVPGVCKNGGTCVNLL 1297 (2531)
T ss_pred             eeEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCcccc----ceeeecccCccccceecCCCEEeecC
Confidence            88999999999999999999999999999999999999999999999999    996332  367788899999999876


Q ss_pred             C-CeeeeeCCCC
Q psy13160        132 N-GFAQCTCLPG  142 (186)
Q Consensus       132 ~-~~~~C~C~~g  142 (186)
                      . ++ .|.|+.|
T Consensus      1298 nggf-~c~Cp~g 1308 (2531)
T KOG4289|consen 1298 NGGF-CCHCPYG 1308 (2531)
T ss_pred             CCce-eccCCCc
Confidence            4 66 8999988

>KOG1217|consensus

Probab=98.67  E-value=2.4e-07  Score=73.39  Aligned_cols=125  Identities=26%  Similarity=0.589  Sum_probs=92.7

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCC--CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCC-------------------
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSP--NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLP-------------------  112 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~--~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~-------------------  112 (186)
                      +.|.|..||.+..+....++|..  .+|.+.+.|.+..+.|.|.|.++|.+.    .+...                   
T Consensus       152 ~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~----~~~~~~~~~~c~~~~~~~~~~g~~  227 (487)
T KOG1217|consen  152 FRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGS----TCETTGNGGTCVDSVACSCPPGAR  227 (487)
T ss_pred             eeeeeCCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCC----cCcCCCCCceEecceeccCCCCCC
Confidence            67999999999888644467863  458888999998888999999999887    33211                   


Q ss_pred             CCCCCC--CCCCCC-CeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCC-CCCCCeecCC-CCCeeeCCCCCC
Q psy13160        113 LNPCHN--SPCGPN-TQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNV-CGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       113 ~~~C~~--~~C~~~-~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~-C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ...|..  ..+... +.|++..+++ .|.+++||.+...  ..+ .++++|.... |.++++|.+. +.|.|.|++||+
T Consensus       228 ~~~c~~~~~~~~~~~~~c~~~~~~~-~C~~~~g~~~~~~--~~~-~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~  302 (487)
T KOG1217|consen  228 GPECEVSIVECASGDGTCVNTVGSY-TCRCPEGYTGDAC--VTC-VDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFT  302 (487)
T ss_pred             CCCcccccccccCCCCcccccCCce-eeeCCCCcccccc--cee-eeccccCCCCccCCCCeeecCCCcceeeCCCCCC
Confidence            112211  123322 7889999999 9999999987620  234 4788998653 8888999988 569999999985

>KOG1225|consensus

Probab=98.65  E-value=1.7e-07  Score=73.79  Aligned_cols=98  Identities=27%  Similarity=0.688  Sum_probs=71.4

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNG  133 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~  133 (186)
                      .+|+|++||.|..|.  ...|... |..++.+++.    .|.|.++|.|+    .|+  +..|. .+|..++.|+..   
T Consensus       265 G~CIC~~Gf~G~dC~--e~~Cp~~-cs~~g~~~~g----~CiC~~g~~G~----dCs--~~~cp-adC~g~G~Ci~G---  327 (525)
T KOG1225|consen  265 GRCICPPGFTGDDCD--ELVCPVD-CSGGGVCVDG----ECICNPGYSGK----DCS--IRRCP-ADCSGHGKCIDG---  327 (525)
T ss_pred             CeEeCCCCCcCCCCC--cccCCcc-cCCCceecCC----EeecCCCcccc----ccc--cccCC-ccCCCCCcccCC---
Confidence            789999999999995  2346434 7666666533    79999999999    885  33453 679888999833   


Q ss_pred             eeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecCCCCCeeeCCCCCC
Q psy13160        134 FAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       134 ~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~C~C~~g~~  186 (186)
                        +|.|.+||+|.     .|...       .|..++.|+|.    |.|..||+
T Consensus       328 --~C~C~~Gy~G~-----~C~~~-------~C~~~g~cv~g----C~C~~Gw~  362 (525)
T KOG1225|consen  328 --ECLCDEGYTGE-----LCIQR-------ACSGGGQCVNG----CKCKKGWR  362 (525)
T ss_pred             --ceEeCCCCcCC-----ccccc-------ccCCCceeccC----ceeccCcc
Confidence              89999999876     67532       26667777652    78888874

>KOG1225|consensus

Probab=98.48  E-value=1.5e-06  Score=68.65  Aligned_cols=103  Identities=29%  Similarity=0.657  Sum_probs=75.3

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNG  133 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~  133 (186)
                      ..|.|..+|.+..|.  ...| +..|...+.|+..    .|.|.+||.|.    .|.  +-.|... |..++.+++.   
T Consensus       234 ~ic~c~~~~~g~~c~--~~~C-~~~c~~~g~c~~G----~CIC~~Gf~G~----dC~--e~~Cp~~-cs~~g~~~~g---  296 (525)
T KOG1225|consen  234 GICECPEGYFGPLCS--TIYC-PGGCTGRGQCVEG----RCICPPGFTGD----DCD--ELVCPVD-CSGGGVCVDG---  296 (525)
T ss_pred             ceeecCCceeCCccc--cccC-CCCCcccceEeCC----eEeCCCCCcCC----CCC--cccCCcc-cCCCceecCC---
Confidence            468999999988885  2335 3445555677643    79999999999    885  3446543 7766666655   


Q ss_pred             eeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecCCCCCeeeCCCCCC
Q psy13160        134 FAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       134 ~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~C~C~~g~~  186 (186)
                        .|.|++||.|.     .|+  +..| +.+|+.++.|+.   -+|.|.+||+
T Consensus       297 --~CiC~~g~~G~-----dCs--~~~c-padC~g~G~Ci~---G~C~C~~Gy~  336 (525)
T KOG1225|consen  297 --ECICNPGYSGK-----DCS--IRRC-PADCSGHGKCID---GECLCDEGYT  336 (525)
T ss_pred             --EeecCCCcccc-----ccc--cccC-CccCCCCCcccC---CceEeCCCCc
Confidence              89999999876     774  3456 468999999983   2599999985

>KOG4260|consensus

Probab=98.45  E-value=1.8e-07  Score=66.77  Aligned_cols=80  Identities=24%  Similarity=0.553  Sum_probs=58.2

Q ss_pred             eCCCCCcCCCCCCCCcCCCCCCCC--CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeec
Q psy13160         95 FCLPEYTGDPPSVPCTLPLNPCHN--SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCD  172 (186)
Q Consensus        95 ~c~~g~~~~~~~~~c~~~~~~C~~--~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~  172 (186)
                      .|+.||.....  .|. +||+|..  .+|..+..|+|+.|+| .|..++||...   -..|+...+-|+    ..+..|+
T Consensus       221 kCkkGW~lde~--gCv-DvnEC~~ep~~c~~~qfCvNteGSf-~C~dk~Gy~~g---~d~C~~~~d~~~----~kn~~c~  289 (350)
T KOG4260|consen  221 KCKKGWKLDEE--GCV-DVNECQNEPAPCKAHQFCVNTEGSF-KCEDKEGYKKG---VDECQFCADVCA----SKNRPCM  289 (350)
T ss_pred             hhcccceeccc--ccc-cHHHHhcCCCCCChhheeecCCCce-EecccccccCC---hHHhhhhhhhcc----cCCCCcc
Confidence            68899986643  677 9999984  5788889999999999 99999998642   113332222222    2355788


Q ss_pred             CC-CCCeeeCCCCC
Q psy13160        173 PN-RAPYCFCPEGT  185 (186)
Q Consensus       173 ~~-~~~~C~C~~g~  185 (186)
                      |+ +.|+|+|.+|+
T Consensus       290 ni~~~~r~v~f~~~  303 (350)
T KOG4260|consen  290 NIDGQYRCVCFSGL  303 (350)
T ss_pred             cCCccEEEEecccc
Confidence            88 88999998875

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.33  E-value=1.3e-07  Score=49.19  Aligned_cols=31  Identities=23%  Similarity=0.558  Sum_probs=26.8

Q ss_pred             CCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        156 RRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      |||||+.  +.|..++.|+|+ |+|+|.|++||+
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            5788874  569888999999 999999999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG4260|consensus

Probab=98.17  E-value=3.4e-06  Score=60.36  Aligned_cols=119  Identities=26%  Similarity=0.438  Sum_probs=75.5

Q ss_pred             eCCCCCCCCCccCCCCCCCCCCCCCCCeeeec---CCCeEeeCCCCCcCCCCCCCCcC-C-------CCCCCC--CCCCC
Q psy13160         57 LCNSDCPFNMAFPEGDECSPNPCGPYTGCRVV---SGSAVCFCLPEYTGDPPSVPCTL-P-------LNPCHN--SPCGP  123 (186)
Q Consensus        57 ~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~---~~~~~C~c~~g~~~~~~~~~c~~-~-------~~~C~~--~~C~~  123 (186)
                      -|+.|..|+.|.+-..- ...||..++.|...   .|+-.|.|.+||.|.    .|.. .       .++-..  ..|+.
T Consensus       131 CCp~gtyGpdCl~Cpgg-ser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp----~C~~Cg~eyfes~Rne~~lvCt~Ch~  205 (350)
T KOG4260|consen  131 CCPDGTYGPDCLQCPGG-SERPCFGNGSCHGDGSREGSGKCKCETGYTGP----LCRYCGIEYFESSRNEQHLVCTACHE  205 (350)
T ss_pred             ccCCCCcCCccccCCCC-CcCCcCCCCcccCCCCCCCCCcccccCCCCCc----cccccchHHHHhhcccccchhhhhhh
Confidence            37778778887521110 13578777888643   256789999999988    6530 0       010000  01221


Q ss_pred             C--CeeeeCCCCeeee-eCCCCCccCCCCCCCCccCCCCCC--CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        124 N--TQCSLLDNGFAQC-TCLPGYVESPNTIRGCVERRQPCE--PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       124 ~--~~C~~~~~~~~~C-~C~~g~~~~~~~~~~c~~~~~~C~--~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      .  +.|... ++. .| .|..||..+   ...| +|||+|.  +.+|..+..|+|+ |+|.|.+++||.
T Consensus       206 ~C~~~Csg~-~~k-~C~kCkkGW~ld---e~gC-vDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~  268 (350)
T KOG4260|consen  206 GCLGVCSGE-SSK-GCSKCKKGWKLD---EEGC-VDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYK  268 (350)
T ss_pred             hhhcccCCC-CCC-Chhhhcccceec---cccc-ccHHHHhcCCCCCChhheeecCCCceEeccccccc
Confidence            1  134222 222 44 589999876   3468 6999997  4679888899999 999999999984

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.98  E-value=5.7e-06  Score=42.95  Aligned_cols=33  Identities=27%  Similarity=0.817  Sum_probs=28.4

Q ss_pred             CCCCCCC--CCCCCCCeeeeCCCCeeeeeCCCCCcc
Q psy13160        112 PLNPCHN--SPCGPNTQCSLLDNGFAQCTCLPGYVE  145 (186)
Q Consensus       112 ~~~~C~~--~~C~~~~~C~~~~~~~~~C~C~~g~~~  145 (186)
                      +|+||..  ..|..++.|+|+.|+| .|.|++||..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy-~C~C~~Gy~~   35 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSY-SCSCPPGYEL   35 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEE-EEEESTTEEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCE-EeeCCCCcEE
Confidence            4788875  3688889999999999 9999999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.82  E-value=3.1e-05  Score=39.28  Aligned_cols=31  Identities=29%  Similarity=0.673  Sum_probs=25.8

Q ss_pred             CCCCCCC-CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        156 RRQPCEP-NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~-~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ++++|.. .+|..++.|++. ++|.|.|++||+
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            3577776 689888899988 889999999984

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.80  E-value=1.3e-05  Score=38.90  Aligned_cols=30  Identities=37%  Similarity=1.028  Sum_probs=25.9

Q ss_pred             CCCCCCCCCCeeeeCC-CCeeeeeCCCCCccC
Q psy13160        116 CHNSPCGPNTQCSLLD-NGFAQCTCLPGYVES  146 (186)
Q Consensus       116 C~~~~C~~~~~C~~~~-~~~~~C~C~~g~~~~  146 (186)
                      |.+++|.++++|+... ++| .|.|++||+|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y-~C~C~~G~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGY-TCECPPGYTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEE-EEEEBTTEEST
T ss_pred             CCCCcCCCCeEEEeCCCCCE-EeECCCCCccC
Confidence            4456899999999998 888 99999999874

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.69  E-value=9.7e-05  Score=37.36  Aligned_cols=31  Identities=29%  Similarity=0.933  Sum_probs=26.9

Q ss_pred             CCCCCC-CCCCCCCeeeeCCCCeeeeeCCCCCc
Q psy13160        113 LNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYV  144 (186)
Q Consensus       113 ~~~C~~-~~C~~~~~C~~~~~~~~~C~C~~g~~  144 (186)
                      +++|.. .+|.+++.|+++.++| .|.|++||.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~-~C~C~~g~~   33 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSY-RCECPPGYT   33 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCe-EeECCCCCc
Confidence            566766 6898888999999999 999999997

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.66  E-value=3.1e-05  Score=37.56  Aligned_cols=30  Identities=43%  Similarity=0.923  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCeeeecC-CCeEeeCCCCCcCC
Q psy13160         74 CSPNPCGPYTGCRVVS-GSAVCFCLPEYTGD  103 (186)
Q Consensus        74 C~~~~c~~~~~C~~~~-~~~~C~c~~g~~~~  103 (186)
                      |.+++|.++++|+... ..|.|.|.+||.|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            4467899999999998 89999999999875

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.62  E-value=9.1e-05  Score=33.14  Aligned_cols=24  Identities=29%  Similarity=0.688  Sum_probs=20.4

Q ss_pred             CeEeeCCCCCcCCCCCCCCcCCCCC
Q psy13160         91 SAVCFCLPEYTGDPPSVPCTLPLNP  115 (186)
Q Consensus        91 ~~~C~c~~g~~~~~~~~~c~~~~~~  115 (186)
                      +|.|+|.+||...+.++.|. +|||
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~-DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCE-DIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccc-cCCC
Confidence            58899999999888878897 8875

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.43  E-value=0.00011  Score=36.53  Aligned_cols=27  Identities=37%  Similarity=0.972  Sum_probs=21.9

Q ss_pred             CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ..|+.++.|+++.++| .|+|++||.|+
T Consensus         6 ~~C~~nA~C~~~~~~~-~C~C~~Gy~Gd   32 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSY-TCTCKPGYEGD   32 (36)
T ss_dssp             GGS-TTCEEEE-TTSE-EEEE-CEEECC
T ss_pred             CCCCCCcEeecCCCCE-EeECCCCCccC
Confidence            4688899999999999 99999999987

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.40  E-value=0.00022  Score=31.89  Aligned_cols=24  Identities=42%  Similarity=0.952  Sum_probs=18.7

Q ss_pred             CeeeeeCCCCCccCCCCCCCCccCCCC
Q psy13160        133 GFAQCTCLPGYVESPNTIRGCVERRQP  159 (186)
Q Consensus       133 ~~~~C~C~~g~~~~~~~~~~c~~~~~~  159 (186)
                      +| .|.|++||...+ +++.| .||||
T Consensus         1 sy-~C~C~~Gy~l~~-d~~~C-~DIdE   24 (24)
T PF12662_consen    1 SY-TCSCPPGYQLSP-DGRSC-EDIDE   24 (24)
T ss_pred             CE-EeeCCCCCcCCC-CCCcc-ccCCC
Confidence            46 899999998654 46788 48875

>KOG1226|consensus

Probab=97.36  E-value=0.0022  Score=52.66  Aligned_cols=106  Identities=23%  Similarity=0.547  Sum_probs=63.2

Q ss_pred             ceeeCCCCCCCCCccCCCC---------CCCC----CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC--
Q psy13160         54 PECLCNSDCPFNMAFPEGD---------ECSP----NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN--  118 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~---------~C~~----~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~--  118 (186)
                      ..|.|.+||.|+.|+-..+         .|..    .+|...+.|+=.    .|.|.+...+...+..|+-+.-.|..  
T Consensus       478 G~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG----qC~C~~~~~~~i~G~fCECDnfsC~r~~  553 (783)
T KOG1226|consen  478 GQCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG----QCVCHKPDNGKIYGKFCECDNFSCERHK  553 (783)
T ss_pred             cceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC----ceEecCCCCCceeeeeeeccCccccccc
Confidence            7899999999999873222         2321    146656666421    56777665533233377633333432  


Q ss_pred             -CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCC---CCCCCCCee
Q psy13160        119 -SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEP---NVCGAGAVC  171 (186)
Q Consensus       119 -~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~---~~C~~~~~C  171 (186)
                       ..|..++.|.=.     +|+|.+||+|...   +|+.+.+.|..   ..|...+.|
T Consensus       554 g~lC~g~G~C~CG-----~CvC~~GwtG~~C---~C~~std~C~~~~G~iCSGrG~C  602 (783)
T KOG1226|consen  554 GVLCGGHGRCECG-----RCVCNPGWTGSAC---NCPLSTDTCESSDGQICSGRGTC  602 (783)
T ss_pred             CcccCCCCeEeCC-----cEEcCCCCccCCC---CCCCCCccccCCCCceeCCCcee
Confidence             248877888544     8999999998733   45556677753   234444444

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.28  E-value=0.00069  Score=33.75  Aligned_cols=33  Identities=27%  Similarity=0.882  Sum_probs=27.2

Q ss_pred             CCCCCC-CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        113 LNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       113 ~~~C~~-~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      +++|.. .+|..++.|.+..++| .|.|++||.+.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~-~C~C~~g~~g~   35 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSY-RCSCPPGYTGR   35 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCe-EeECCCCCcCC
Confidence            456665 6788788999999999 99999999764

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.21  E-value=4.2e-05  Score=52.02  Aligned_cols=120  Identities=30%  Similarity=0.630  Sum_probs=67.1

Q ss_pred             eeCCCCCC---CCCccCCCCCCC-----CCCCCCCCeeeecC-----CCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCC
Q psy13160         56 CLCNSDCP---FNMAFPEGDECS-----PNPCGPYTGCRVVS-----GSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCG  122 (186)
Q Consensus        56 C~C~~g~~---~~~c~~~~~~C~-----~~~c~~~~~C~~~~-----~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~  122 (186)
                      |.|..||.   ...|+ ...+|.     ..+|...+.|.+..     ..|.|.|.+||.....  .|.  .+.|....|.
T Consensus        22 C~Cnegfvl~~EntCE-~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~--vCv--p~~C~~~~Cg   96 (197)
T PF06247_consen   22 CKCNEGFVLKNENTCE-EKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQG--VCV--PNKCNNKDCG   96 (197)
T ss_dssp             EEESTTEEEEETTEEE-E----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSS--SEE--EGGGSS---T
T ss_pred             EEcCCCcEEccccccc-cceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCC--eEc--hhhcCceecC
Confidence            34455776   44565 444453     35788899998765     4699999999986633  453  4567666777


Q ss_pred             CCCeeeeCC---CCeeeeeCCCCCccCCCCCCCCccCC-CCCCCCCCCCCCeecCC-CCCeeeCCCCC
Q psy13160        123 PNTQCSLLD---NGFAQCTCLPGYVESPNTIRGCVERR-QPCEPNVCGAGAVCDPN-RAPYCFCPEGT  185 (186)
Q Consensus       123 ~~~~C~~~~---~~~~~C~C~~g~~~~~~~~~~c~~~~-~~C~~~~C~~~~~C~~~-~~~~C~C~~g~  185 (186)
                       .+.|+..+   ... .|+|..|+..+  ....|..+- ..|+ ..|..+.+|... +-|+|.+.+|+
T Consensus        97 -~GKCI~d~~~~~~~-~CSC~IGkV~~--dn~kCtk~G~T~C~-LKCk~nE~CK~~~~~Y~C~~~~~~  159 (197)
T PF06247_consen   97 -SGKCILDPDNPNNP-TCSCNIGKVPD--DNKKCTKTGETKCS-LKCKENEECKLVDGYYKCVCKEGF  159 (197)
T ss_dssp             -TEEEEEEEGGGSEE-EEEE-TEEETT--TTTESEEEE---------TTTEEEEEETTEEEEEE-TT-
T ss_pred             -CCeEEecCCCCCCc-eeEeeeceEec--cCCcccCCCcccee-eecCCCcceeeeCcEEEeecCCCC
Confidence             46786443   345 89999998732  233453322 2443 346677789887 45899998876

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.20  E-value=0.001  Score=33.08  Aligned_cols=33  Identities=45%  Similarity=0.846  Sum_probs=27.4

Q ss_pred             CCCCCC-CCCCCCCeeeecCCCeEeeCCCCCcCC
Q psy13160         71 GDECSP-NPCGPYTGCRVVSGSAVCFCLPEYTGD  103 (186)
Q Consensus        71 ~~~C~~-~~c~~~~~C~~~~~~~~C~c~~g~~~~  103 (186)
                      +++|.. .+|.+.+.|.+..+.|.|.|..+|.+.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~   35 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGR   35 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCcCC
Confidence            456665 678878899998899999999999886

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.75  E-value=0.0026  Score=31.04  Aligned_cols=25  Identities=32%  Similarity=0.784  Sum_probs=20.8

Q ss_pred             CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        162 PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       162 ~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ..+|..++.|++. ++|.|.|+.||.
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCc
Confidence            4567778899988 789999999984

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.69  E-value=0.0038  Score=30.42  Aligned_cols=28  Identities=29%  Similarity=0.892  Sum_probs=23.6

Q ss_pred             CCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        118 NSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       118 ~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ..+|.+++.|+++.++| .|.|+.||.+.
T Consensus         5 ~~~C~~~~~C~~~~~~~-~C~C~~g~~g~   32 (36)
T cd00053           5 SNPCSNGGTCVNTPGSY-RCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCEEecCCCCe-EeECCCCCccc
Confidence            45677778999999999 99999999764

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.68  E-value=0.0014  Score=32.53  Aligned_cols=29  Identities=38%  Similarity=0.802  Sum_probs=22.5

Q ss_pred             CCCCCCCeeeecCCCeEeeCCCCCcCCCC
Q psy13160         77 NPCGPYTGCRVVSGSAVCFCLPEYTGDPP  105 (186)
Q Consensus        77 ~~c~~~~~C~~~~~~~~C~c~~g~~~~~~  105 (186)
                      ..|...+.|.++.++|.|+|.+||.|++.
T Consensus         6 ~~C~~nA~C~~~~~~~~C~C~~Gy~GdG~   34 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSYTCTCKPGYEGDGF   34 (36)
T ss_dssp             GGS-TTCEEEE-TTSEEEEE-CEEECCST
T ss_pred             CCCCCCcEeecCCCCEEeECCCCCccCCc
Confidence            35778899999999999999999998743

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.57  E-value=0.0048  Score=30.19  Aligned_cols=25  Identities=32%  Similarity=0.978  Sum_probs=21.8

Q ss_pred             CCCCCCCeeeeCCCCeeeeeCCCCCcc
Q psy13160        119 SPCGPNTQCSLLDNGFAQCTCLPGYVE  145 (186)
Q Consensus       119 ~~C~~~~~C~~~~~~~~~C~C~~g~~~  145 (186)
                      .+|.++ .|+++.++| .|.|++||.+
T Consensus         6 ~~C~~~-~C~~~~~~~-~C~C~~g~~g   30 (35)
T smart00181        6 GPCSNG-TCINTPGSY-TCSCPPGYTG   30 (35)
T ss_pred             CCCCCC-EEECCCCCe-EeECCCCCcc
Confidence            467776 899999999 9999999987

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.44  E-value=0.0087  Score=29.24  Aligned_cols=25  Identities=44%  Similarity=0.925  Sum_probs=21.8

Q ss_pred             CCCCCCCeeeecCCCeEeeCCCCCcC
Q psy13160         77 NPCGPYTGCRVVSGSAVCFCLPEYTG  102 (186)
Q Consensus        77 ~~c~~~~~C~~~~~~~~C~c~~g~~~  102 (186)
                      .+|.++ .|++..+.|.|.|.+||.+
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCcc
Confidence            567776 8998889999999999988

>KOG1226|consensus

Probab=96.39  E-value=0.076  Score=44.12  Aligned_cols=80  Identities=25%  Similarity=0.622  Sum_probs=49.0

Q ss_pred             ceeeCCCCCC----CCCccCCCCCCCC---CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc--CCCCCCCCC---CC
Q psy13160         54 PECLCNSDCP----FNMAFPEGDECSP---NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT--LPLNPCHNS---PC  121 (186)
Q Consensus        54 ~~C~C~~g~~----~~~c~~~~~~C~~---~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~--~~~~~C~~~---~C  121 (186)
                      ..|.|.....    |+.|+-+.-.|..   ..|..++.|.=.    .|+|.+||+|+    .|.  .+.+.|.+.   .|
T Consensus       525 GqC~C~~~~~~~i~G~fCECDnfsC~r~~g~lC~g~G~C~CG----~CvC~~GwtG~----~C~C~~std~C~~~~G~iC  596 (783)
T KOG1226|consen  525 GQCVCHKPDNGKIYGKFCECDNFSCERHKGVLCGGHGRCECG----RCVCNPGWTGS----ACNCPLSTDTCESSDGQIC  596 (783)
T ss_pred             CceEecCCCCCceeeeeeeccCcccccccCcccCCCCeEeCC----cEEcCCCCccC----CCCCCCCCccccCCCCcee
Confidence            7778876665    7778644433432   246666666422    68899999988    664  344556531   36


Q ss_pred             CCCCeeeeCCCCeeeeeCCCC-CccC
Q psy13160        122 GPNTQCSLLDNGFAQCTCLPG-YVES  146 (186)
Q Consensus       122 ~~~~~C~~~~~~~~~C~C~~g-~~~~  146 (186)
                      ...++|.=.     +|+|... |.|.
T Consensus       597 SGrG~C~Cg-----~C~C~~~~~sG~  617 (783)
T KOG1226|consen  597 SGRGTCECG-----RCKCTDPPYSGE  617 (783)
T ss_pred             CCCceeeCC-----ceEcCCCCcCcc
Confidence            666666443     6777655 6654

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.84  E-value=0.003  Score=23.87  Aligned_cols=13  Identities=15%  Similarity=0.314  Sum_probs=8.5

Q ss_pred             eeeCCCCCCCCCc
Q psy13160         55 ECLCNSDCPFNMA   67 (186)
Q Consensus        55 ~C~C~~g~~~~~c   67 (186)
                      .|+|++||+|..|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            3677888877765

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.82  E-value=0.007  Score=30.03  Aligned_cols=25  Identities=28%  Similarity=0.436  Sum_probs=19.3

Q ss_pred             CeeeecCCCeEeeCCCCCcCCCCCC
Q psy13160         83 TGCRVVSGSAVCFCLPEYTGDPPSV  107 (186)
Q Consensus        83 ~~C~~~~~~~~C~c~~g~~~~~~~~  107 (186)
                      ..|++.+++|.|.|++||....+++
T Consensus        10 h~C~~~~g~~~C~C~~Gy~L~~D~~   34 (36)
T PF14670_consen   10 HICVNTPGSYRCSCPPGYKLAEDGR   34 (36)
T ss_dssp             SEEEEETTSEEEE-STTEEE-TTSS
T ss_pred             CCCccCCCceEeECCCCCEECcCCC
Confidence            3899999999999999998775543

...

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.38  E-value=0.017  Score=28.64  Aligned_cols=21  Identities=29%  Similarity=0.817  Sum_probs=17.2

Q ss_pred             CeeeeCCCCeeeeeCCCCCccC
Q psy13160        125 TQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       125 ~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ..|++++++| +|.|++||...
T Consensus        10 h~C~~~~g~~-~C~C~~Gy~L~   30 (36)
T PF14670_consen   10 HICVNTPGSY-RCSCPPGYKLA   30 (36)
T ss_dssp             SEEEEETTSE-EEE-STTEEE-
T ss_pred             CCCccCCCce-EeECCCCCEEC
Confidence            4799999999 99999999865

...

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=93.62  E-value=0.078  Score=38.05  Aligned_cols=34  Identities=32%  Similarity=0.669  Sum_probs=26.3

Q ss_pred             CCCCccCCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        150 IRGCVERRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       150 ~~~c~~~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +..|. ++++|..  +.|.  ..|.+. |+|.|.|++||+
T Consensus       181 ~~~C~-~~~~C~~~~~~c~--~~C~~~~g~~~c~c~~g~~  217 (224)
T cd01475         181 GKICV-VPDLCATLSHVCQ--QVCISTPGSYLCACTEGYA  217 (224)
T ss_pred             cccCc-CchhhcCCCCCcc--ceEEcCCCCEEeECCCCcc
Confidence            35684 7888974  4564  479988 899999999985

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=93.50  E-value=0.16  Score=24.44  Aligned_cols=24  Identities=25%  Similarity=0.639  Sum_probs=19.2

Q ss_pred             CCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        120 PCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       120 ~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      .|..+++|+...+   +|+|.+||+|.
T Consensus         7 ~C~~~G~C~~~~g---~C~C~~g~~G~   30 (32)
T PF07974_consen    7 ICSGHGTCVSPCG---RCVCDSGYTGP   30 (32)
T ss_pred             ccCCCCEEeCCCC---EEECCCCCcCC
Confidence            5778899986633   89999999875

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=92.65  E-value=0.023  Score=38.98  Aligned_cols=119  Identities=20%  Similarity=0.482  Sum_probs=64.5

Q ss_pred             CCCCCCCeecc-CCCeeEecCC---------CCCCCCCCC----------CC--Cc----------ceeeCCCCCC--CC
Q psy13160         20 NPCDPYSSCSV-YSEHVAMCDP---------CSGPQAPWL----------PH--CR----------PECLCNSDCP--FN   65 (186)
Q Consensus        20 ~~C~~~~~C~~-~~~~~C~C~~---------c~~~~~~C~----------~~--C~----------~~C~C~~g~~--~~   65 (186)
                      ..| ++|..+. .++|.|.|.+         |+ ...+|.          .-  |.          |.|.|..||.  ..
T Consensus         6 T~C-KNG~LiQMSNHfEC~Cnegfvl~~EntCE-~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~   83 (197)
T PF06247_consen    6 TIC-KNGYLIQMSNHFECKCNEGFVLKNENTCE-EKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQG   83 (197)
T ss_dssp             ----BTEEEEEESSEEEEEESTTEEEEETTEEE-E----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSS
T ss_pred             ccc-cCCEEEEccCceEEEcCCCcEEccccccc-cceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCC
Confidence            346 4677788 8889999977         33 222222          11  22          8899999998  33


Q ss_pred             CccCCCCCCCCCCCCCCCeeeecCC---CeEeeCCCCCcCCCCCCCCcC-CCCCCCCCCCCCCCeeeeCCCCeeeeeCCC
Q psy13160         66 MAFPEGDECSPNPCGPYTGCRVVSG---SAVCFCLPEYTGDPPSVPCTL-PLNPCHNSPCGPNTQCSLLDNGFAQCTCLP  141 (186)
Q Consensus        66 ~c~~~~~~C~~~~c~~~~~C~~~~~---~~~C~c~~g~~~~~~~~~c~~-~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~  141 (186)
                      .|.  .+.|....|+ .+.|+..+.   ...|+|.-|+... +...|.. ...+|+. .|..+..|....+=| .|.+..
T Consensus        84 vCv--p~~C~~~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~-dn~kCtk~G~T~C~L-KCk~nE~CK~~~~~Y-~C~~~~  157 (197)
T PF06247_consen   84 VCV--PNKCNNKDCG-SGKCILDPDNPNNPTCSCNIGKVPD-DNKKCTKTGETKCSL-KCKENEECKLVDGYY-KCVCKE  157 (197)
T ss_dssp             SEE--EGGGSS---T-TEEEEEEEGGGSEEEEEE-TEEETT-TTTESEEEE---------TTTEEEEEETTEE-EEEE-T
T ss_pred             eEc--hhhcCceecC-CCeEEecCCCCCCceeEeeeceEec-cCCcccCCCccceee-ecCCCcceeeeCcEE-EeecCC
Confidence            453  3446666677 578875542   3589998888721 2124431 1234543 477778898888777 999999


Q ss_pred             CCccC
Q psy13160        142 GYVES  146 (186)
Q Consensus       142 g~~~~  146 (186)
                      ++.++
T Consensus       158 ~~~~~  162 (197)
T PF06247_consen  158 GFPGD  162 (197)
T ss_dssp             T-EEE
T ss_pred             CCCCC
Confidence            98765

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=92.10  E-value=0.32  Score=34.91  Aligned_cols=40  Identities=20%  Similarity=0.243  Sum_probs=29.2

Q ss_pred             CCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCC
Q psy13160         64 FNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDP  104 (186)
Q Consensus        64 ~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~  104 (186)
                      +..|. +.++|...+......|.++.++|.|.|.+||...+
T Consensus       181 ~~~C~-~~~~C~~~~~~c~~~C~~~~g~~~c~c~~g~~~~~  220 (224)
T cd01475         181 GKICV-VPDLCATLSHVCQQVCISTPGSYLCACTEGYALLE  220 (224)
T ss_pred             cccCc-CchhhcCCCCCccceEEcCCCCEEeECCCCccCCC
Confidence            45675 67778643322335899999999999999998753

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=89.53  E-value=0.22  Score=24.68  Aligned_cols=30  Identities=33%  Similarity=0.813  Sum_probs=19.7

Q ss_pred             CCCCCCCCCCeeeeCC-CCeeeeeCCCCCccC
Q psy13160        116 CHNSPCGPNTQCSLLD-NGFAQCTCLPGYVES  146 (186)
Q Consensus       116 C~~~~C~~~~~C~~~~-~~~~~C~C~~g~~~~  146 (186)
                      |....|+.++.|++.. |.+ .|+|..||...
T Consensus         2 C~~~~cP~NA~C~~~~dG~e-ecrCllgyk~~   32 (37)
T PF12946_consen    2 CIDTKCPANAGCFRYDDGSE-ECRCLLGYKKV   32 (37)
T ss_dssp             -SSS---TTEEEEEETTSEE-EEEE-TTEEEE
T ss_pred             ccCccCCCCcccEEcCCCCE-EEEeeCCcccc
Confidence            3345678888998887 677 99999999754

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>KOG0994|consensus

Probab=88.98  E-value=6.9  Score=35.05  Aligned_cols=54  Identities=30%  Similarity=0.656  Sum_probs=30.8

Q ss_pred             eeeCCCCeeee-eCCCCCccCCCCCCCCccCCCCCCCCCCCC-------C-CeecC---CCCCeeeCCCCCC
Q psy13160        127 CSLLDNGFAQC-TCLPGYVESPNTIRGCVERRQPCEPNVCGA-------G-AVCDP---NRAPYCFCPEGTM  186 (186)
Q Consensus       127 C~~~~~~~~~C-~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~-------~-~~C~~---~~~~~C~C~~g~~  186 (186)
                      |.+...++ .| +|..||.|++.-|.     ...|.+=+|..       + -.|..   +....|.|.+||+
T Consensus       878 CqD~T~G~-~CdrCl~GyyGdP~lg~-----g~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~  943 (1758)
T KOG0994|consen  878 CQDSTTGH-SCDRCLDGYYGDPRLGS-----GIGCRPCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYS  943 (1758)
T ss_pred             cccccccc-chhhhhccccCCcccCC-----CCCCCCCCCCCCCccchhccccccccccccceeeecccCcc
Confidence            55666677 67 69999999874322     12232222221       1 13432   1356899999985

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=88.32  E-value=0.52  Score=22.78  Aligned_cols=17  Identities=59%  Similarity=1.368  Sum_probs=11.7

Q ss_pred             eecCCCCCeeeCCCCCC
Q psy13160        170 VCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       170 ~C~~~~~~~C~C~~g~~  186 (186)
                      .|.....+.|.|++||+
T Consensus        11 ~CDpn~~~~C~CPeGyI   27 (34)
T PF09064_consen   11 DCDPNSPGQCFCPEGYI   27 (34)
T ss_pred             ccCCCCCCceeCCCceE
Confidence            55443345799999985

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>KOG0994|consensus

Probab=82.28  E-value=8.6  Score=34.50  Aligned_cols=11  Identities=45%  Similarity=1.168  Sum_probs=8.6

Q ss_pred             eeeCCCCCccC
Q psy13160        136 QCTCLPGYVES  146 (186)
Q Consensus       136 ~C~C~~g~~~~  146 (186)
                      .|+|.|||-|.
T Consensus      1085 QCqCkpGfGGR 1095 (1758)
T KOG0994|consen 1085 QCQCKPGFGGR 1095 (1758)
T ss_pred             ceeccCCCCCc
Confidence            68899988654

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=81.65  E-value=2.3  Score=26.80  Aligned_cols=31  Identities=29%  Similarity=0.886  Sum_probs=23.2

Q ss_pred             CCCCCCC-CCCCCCCeecCCCCCeeeCCCCCC
Q psy13160        156 RRQPCEP-NVCGAGAVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~-~~C~~~~~C~~~~~~~C~C~~g~~  186 (186)
                      ..+.|.. ..|+..+.|.......|.|.+||.
T Consensus        76 p~d~Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~  107 (110)
T PF00954_consen   76 PKDQCDVYGFCGPNGICNSNNSPKCSCLPGFE  107 (110)
T ss_pred             cccCCCCccccCCccEeCCCCCCceECCCCcC
Confidence            3456753 679999999644556799999984

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	186
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	6e-07
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	2e-06
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	2e-06
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	2e-05
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	6e-05
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	4e-05
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	6e-05
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-04

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 23/108 (21%), Positives = 29/108 (26%), Gaps = 5/108 (4%)

Query: 71  GDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLL 130
           G  C   PC     C+       C C P Y G      C L  N CH           L 
Sbjct: 5   GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSN----CELAKNECHPERTDGCQHFCLP 60

Query: 131 DNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPY 178
                 C+C  GY    +  +     +  C           D    P+
Sbjct: 61  GQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSE-KRAPDLQDLPW 107

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 12/106 (11%)

Query: 70  EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPC---GPNTQ 126
           +GD+C+ +PC     C+    S +CFCLP + G      C    +          G    
Sbjct: 46  DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRN----CETHKDDQLICVNENGGCEQY 101

Query: 127 CSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCD 172
           CS        C C  GY     ++        P     CG   + +
Sbjct: 102 CSDHTGTKRSCRCHEGY-----SLLADGVSCTPTVEYPCGKIPILE 142

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 10/102 (9%)

Query: 70  EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSL 129
           +GD+C PNPC     C+    S  C+C   + G      C L       +        + 
Sbjct: 47  DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKN----CELDATCNIKNGRCKQFCKTG 102

Query: 130 LDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC 171
            D+    C+C  GY      +    +  +P  P  CG  +V 
Sbjct: 103 ADSKV-LCSCTTGY-----RLAPDQKSCKPAVPFPCGRVSVS 138

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 28/137 (20%), Positives = 41/137 (29%), Gaps = 12/137 (8%)

Query: 52  CRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTL 111
                  +    F   + +GD+C  +PC     C+   G   C CL  + G      C L
Sbjct: 23  REVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK----NCEL 78

Query: 112 PLN-PCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAV 170
                C       +  C    N    C+C  GY     T+    +   P  P  CG   +
Sbjct: 79  FTRKLCSLDNGDCDQFCHEEQNSV-VCSCARGY-----TLADNGKACIPTGPYPCGKQTL 132

Query: 171 CDPNRAPY-CFCPEGTM 186
               R+        G  
Sbjct: 133 ERRKRSVAQATSSSGEA 149

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 40.9 bits (96), Expect = 6e-05
 Identities = 17/100 (17%), Positives = 22/100 (22%), Gaps = 9/100 (9%)

Query: 72  DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLD 131
             CS +       C     S VC C   YT             P    PCG  T      
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLAD----NGKACIPTGPYPCGKQTLERRKR 137

Query: 132 NGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC 171
           +   Q T   G            +     + +        
Sbjct: 138 SVA-QATSSSGEAPDSI----TWKPYDAADLDPTENPFDL 172

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 72  DECS--PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSL 129
           DECS   NPC     C    GS  C CL  YTG      C + +N C ++PC  +  C  
Sbjct: 6   DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPR----CEIDVNECVSNPCQNDATCLD 61

Query: 130 LDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC-DPNRAPYCFCPEG 184
               F QC C+PGY         C      C  + C     C D      C CP G
Sbjct: 62  QIGEF-QCICMPGY-----EGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTG 111

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 72  DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLD 131
           +EC  NPC     C    G   C C+P Y G    V C +  + C +SPC  N +C    
Sbjct: 46  NECVSNPCQNDATCLDQIGEFQCICMPGYEG----VHCEVNTDECASSPCLHNGRCLDKI 101

Query: 132 NGFAQCTCLPGY 143
           N F QC C  G+
Sbjct: 102 NEF-QCECPTGF 112

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 70  EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLN-PCHNSPCGPNTQCS 128
           +GD+C  +PC     C+   G   C CL  + G      C L     C       +  C 
Sbjct: 41  DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK----NCELFTRKLCSLDNGDCDQFCH 96

Query: 129 LLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVC 171
              N    C+C  GY     T+    +   P  P  CG   + 
Sbjct: 97  EEQNSV-VCSCARGY-----TLADNGKACIPTGPYPCGKQTLE 133

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	186
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.9
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.87
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.86
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.81
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.8
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.78
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.67
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.66
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.64
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.64
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.63
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.59
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.56
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.54
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.52
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.5
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.49
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.44
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.43
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.43
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.42
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.41
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.34
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.33
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.32
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.3
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.3
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.29
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.29
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.29
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.28
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.27
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.26
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.25
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.25
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.23
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.22
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.22
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.18
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.16
2vh0_B	134	Activated factor XA light chain; serine protease,	99.15
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.14
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.13
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.1
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.08
2vh0_B	134	Activated factor XA light chain; serine protease,	99.04
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.99
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.93
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.92
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.85
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.83
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.79
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.77
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.72
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.69
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.66
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.65
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.57
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.56
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.55
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.41
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.4
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.31
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.31
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.23
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.17
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.1
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.09
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.08
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.04
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.97
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.97
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.88
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.85
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.83
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.74
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.61
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.57
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.56
1ob1_C	99	Major merozoite surface protein; immune system, im	97.48
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.48
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.44
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.38
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.36
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.34
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.33
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.31
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.29
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.25
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.06
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.01
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.99
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.88
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.79
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	96.7
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.65
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.62
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.59
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.58
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.57
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.48
1ob1_C	99	Major merozoite surface protein; immune system, im	96.36
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.12
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.08
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.61
2wph_E	59	Coagulation factor IXA light chain; serine proteas	95.59
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.53
1szb_A	170	Mannose binding lectin-associated serine protease-	95.5
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.42
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.28
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.25
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	95.18
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.13
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	94.84
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.84
2wph_E	59	Coagulation factor IXA light chain; serine proteas	94.74
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.44
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	94.04
1szb_A	170	Mannose binding lectin-associated serine protease-	93.98
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	93.78
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.74
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	91.85
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.82
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	90.23
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	89.95
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	89.69
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	89.55
1nzi_A	159	Complement C1S component; calcium, innate immunity	89.43
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	89.31
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	89.25
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	88.33
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	87.26
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	86.8
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	86.64
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	86.44
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	85.82
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	85.35
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	84.91
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	83.06
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	82.36
1nzi_A	159	Complement C1S component; calcium, innate immunity	82.36
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	81.81
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	80.6

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.90  E-value=1.7e-23  Score=137.66  Aligned_cols=121  Identities=27%  Similarity=0.562  Sum_probs=105.7

Q ss_pred             CCCCCCC--CCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeec
Q psy13160         12 NDSLACK--PNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVV   88 (186)
Q Consensus        12 ~~~~~c~--~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~   88 (186)
                      .|||+|.  +++|.++++|++ .++|.|.|                    .+||.|..|+.++++|...+|.+.+.|++.
T Consensus         3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C--------------------~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~   62 (135)
T 2vj3_A            3 QDVDECSLGANPCEHAGKCINTLGSFECQC--------------------LQGYTGPRCEIDVNECVSNPCQNDATCLDQ   62 (135)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEEC--------------------CTTEESTTSCEECCTTTTCCCCSSCEEEEC
T ss_pred             cccccccCCCCCCCCCCEeECCCCCEEEEC--------------------CCCCcCCcccccCccCCCCCCCCCCEEeCC
Confidence            5899997  789999999999 99888765                    459999999778899998999999999999


Q ss_pred             CCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCC
Q psy13160         89 SGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEP  162 (186)
Q Consensus        89 ~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~  162 (186)
                      .++|.|.|.+||.+.    .|+.++++|...+|.++++|+++.++| .|.|++||+|.     .|+.++++|..
T Consensus        63 ~g~~~C~C~~G~~G~----~C~~~~~~C~~~~C~~~g~C~~~~g~~-~C~C~~G~~G~-----~C~~~i~~C~~  126 (135)
T 2vj3_A           63 IGEFQCICMPGYEGV----HCEVNTDECASSPCLHNGRCLDKINEF-QCECPTGFTGH-----LCQVDLHHILD  126 (135)
T ss_dssp             SSCEEEECCTTEESS----SSCEECCTTTTCCSTTTCEEEECSSCE-EEECCTTEESS-----SSCEECC----
T ss_pred             CCCceeeCCCCCcCC----cceecCCcccCCCcCCCCEeECCCCCe-EEECCCCCcCC-----ccCccCccccC
Confidence            999999999999998    887578999989999999999999999 99999999875     89778999974

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.87  E-value=1.1e-23  Score=145.94  Aligned_cols=141  Identities=23%  Similarity=0.526  Sum_probs=116.4

Q ss_pred             CCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCC---CccCCCCCCC----CCCCCCCCeeeec
Q psy13160         17 CKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFN---MAFPEGDECS----PNPCGPYTGCRVV   88 (186)
Q Consensus        17 c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~---~c~~~~~~C~----~~~c~~~~~C~~~   88 (186)
                      ..++||. +++|++ .++|.|.|+                    +||+|.   .|+ ++++|.    ..+|.+++.|++.
T Consensus         8 ~~~~pC~-ng~C~~~~g~~~C~C~--------------------~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~   65 (186)
T 1z1y_A            8 TVDTICX-NGQLVQMSNHFXCMCN--------------------EGLVHLSENTCE-EXNECXXETLGXACGEFGQCIEN   65 (186)
T ss_dssp             CTTCCCB-TEEEEECSSCEEEEEC--------------------TTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEEC
T ss_pred             CCCCCCC-CCEeECCCCCeEeECC--------------------CCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecC
Confidence            3578897 569999 998888654                    499865   787 789998    6789988999999


Q ss_pred             C-----CCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeee----eCCCCeeeeeCCCCCccCCCCCCCCccC--C
Q psy13160         89 S-----GSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCS----LLDNGFAQCTCLPGYVESPNTIRGCVER--R  157 (186)
Q Consensus        89 ~-----~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~----~~~~~~~~C~C~~g~~~~~~~~~~c~~~--~  157 (186)
                      .     ++|.|.|.+||.+...  .|  .+++|...+|.+++.|+    ++.++| +|.|++||++...++..|+ +  +
T Consensus        66 ~~~~~~g~y~C~C~~G~~g~~~--~C--~~d~C~~~~C~~~g~C~~~~~~~~g~~-~C~C~~Gy~g~~~~~~~C~-~~~~  139 (186)
T 1z1y_A           66 PDPAQVNMYXCGCIEGYTLXED--TC--VLDVCQYXNCGESGECIVEYLSEIQSA-GCSCAIGXVPNPEDEXXCT-XTGE  139 (186)
T ss_dssp             SSTTSSCSEEEEECTTEEEETT--EE--EEGGGTTCCCCTTEEEEEEEETTEEEE-EEEECTEEEEETTTTTEEE-EEEC
T ss_pred             CCCcCCCCEECCCCCCCccCCC--CC--CCCcCcCCCCCCCCEEeeCCcCCCCCc-eEECCCCCcccCCCCCcce-EcCC
Confidence            8     8999999999998732  34  47899988999889998    888899 9999999998433356885 4  4


Q ss_pred             CCCCCCCC-CCCCeecCC-CCCeeeCCCCCC
Q psy13160        158 QPCEPNVC-GAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       158 ~~C~~~~C-~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ++|. .+| .++++|+++ ++|+|.|++||+
T Consensus       140 ~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~  169 (186)
T 1z1y_A          140 TACQ-LXCNTDNEVCXNVEGVYXCQCMEGFT  169 (186)
T ss_dssp             CCCC-CCCCTTTEEEEEETTEEEEEECTTCE
T ss_pred             Cccc-ccccccCcceecCCCCeeeECCCCCc
Confidence            7897 489 888999988 899999999994

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.86  E-value=3.5e-21  Score=126.52  Aligned_cols=107  Identities=35%  Similarity=0.763  Sum_probs=97.5

Q ss_pred             CCCCCC--CCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCC
Q psy13160         70 EGDECS--PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESP  147 (186)
Q Consensus        70 ~~~~C~--~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~  147 (186)
                      ++++|.  ..+|.++++|++..++|.|.|.+||.+.    .|+.++++|...+|..+++|++..++| .|.|++||+|. 
T Consensus         4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~----~C~~~~~~C~~~~C~~~~~C~~~~g~~-~C~C~~G~~G~-   77 (135)
T 2vj3_A            4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP----RCEIDVNECVSNPCQNDATCLDQIGEF-QCICMPGYEGV-   77 (135)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST----TSCEECCTTTTCCCCSSCEEEECSSCE-EEECCTTEESS-
T ss_pred             ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC----cccccCccCCCCCCCCCCEEeCCCCCc-eeeCCCCCcCC-
Confidence            788997  5789999999999999999999999998    886578999989999999999999999 99999999875 


Q ss_pred             CCCCCCccCCCCCCCCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        148 NTIRGCVERRQPCEPNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       148 ~~~~~c~~~~~~C~~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                          .|+.++++|...+|.++++|++. ++|+|.|++||+
T Consensus        78 ----~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~  113 (135)
T 2vj3_A           78 ----HCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFT  113 (135)
T ss_dssp             ----SSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEE
T ss_pred             ----cceecCCcccCCCcCCCCEeECCCCCeEEECCCCCc
Confidence                78778899998999999999988 889999999984

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.81  E-value=1.1e-19  Score=120.62  Aligned_cols=105  Identities=30%  Similarity=0.675  Sum_probs=87.5

Q ss_pred             CCCCCCCCCCCCeeeecC--CCeEeeCCCCCcCCCCCCCCcC------------CCCCCCCCCCCCCCeee-------eC
Q psy13160         72 DECSPNPCGPYTGCRVVS--GSAVCFCLPEYTGDPPSVPCTL------------PLNPCHNSPCGPNTQCS-------LL  130 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~--~~~~C~c~~g~~~~~~~~~c~~------------~~~~C~~~~C~~~~~C~-------~~  130 (186)
                      |+|.++||.++++|++..  ++|.|.|.+||.+.    .|+.            ++++|...+|.++++|+       ++
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~----~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~   76 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDP----NCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDT   76 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCTT----TTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTE
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCC----CCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCC
Confidence            467788999999999765  57999999999987    6652            35678888899999999       66


Q ss_pred             CCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        131 DNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       131 ~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      .++| .|.|++||.|.     .|+.++++|..++|.++++|++. ++|+|.|++||+
T Consensus        77 ~~~~-~C~C~~G~~G~-----~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  127 (143)
T 4d90_A           77 FIGY-VCKCPRGFNGI-----HCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM  127 (143)
T ss_dssp             ECCE-EEECCTTEEST-----TSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred             CCCe-EeECcCCCcCC-----CcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence            6789 99999999865     88668999998999999999987 889999999995

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.80  E-value=3e-19  Score=118.53  Aligned_cols=107  Identities=24%  Similarity=0.564  Sum_probs=89.4

Q ss_pred             CCCCCCCCCCCCeecc-C--CCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccC------------CCCCCCCCCC
Q psy13160         15 LACKPNPCDPYSSCSV-Y--SEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFP------------EGDECSPNPC   79 (186)
Q Consensus        15 ~~c~~~~C~~~~~C~~-~--~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~------------~~~~C~~~~c   79 (186)
                      |+|.++||.++++|++ .  ++|.|.|                    ++||+|..|+.            ++++|...+|
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C--------------------~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C   60 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCEC--------------------PDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC   60 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEEC--------------------CTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCC
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeEC--------------------CCCCCCCCCccCccccccccccccCCcCCCCCC
Confidence            5788999999999998 5  5667654                    55888888863            4577888899


Q ss_pred             CCCCeee-------ecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160         80 GPYTGCR-------VVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus        80 ~~~~~C~-------~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      .+++.|+       ++.++|.|.|.+||.+.    .|+.++++|...+|.++++|+++.++| +|.|++||+|.
T Consensus        61 ~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~----~C~~~i~~C~~~~C~~~~~C~~~~g~~-~C~C~~G~~G~  129 (143)
T 4d90_A           61 HNGGTCEISEAYRGDTFIGYVCKCPRGFNGI----HCQHNINECEVEPCKNGGICTDLVANY-SCECPGEFMGR  129 (143)
T ss_dssp             CTTCEEEECCCEETTEECCEEEECCTTEEST----TSCEECCTTTTCCSCTTCEEEEETTEE-EEECCTTCBST
T ss_pred             CCCCEecCCCccccCCCCCeEeECcCCCcCC----CcccCCCcCCCCCCCCCCEeECCCCCe-EeECCCCCccC
Confidence            9999998       56678999999999988    897689999989999999999999999 99999999986

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.78  E-value=7.8e-19  Score=139.77  Aligned_cols=124  Identities=28%  Similarity=0.603  Sum_probs=101.3

Q ss_pred             CCCCCCCCCCCCCCCeecc-C-CCeeE-ecCCCCCCCCCCCCCCcceeeCCCCCCC--CCccCCCCCCCCCC--CCCCC-
Q psy13160         12 NDSLACKPNPCDPYSSCSV-Y-SEHVA-MCDPCSGPQAPWLPHCRPECLCNSDCPF--NMAFPEGDECSPNP--CGPYT-   83 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~-~~~~C-~C~~c~~~~~~C~~~C~~~C~C~~g~~~--~~c~~~~~~C~~~~--c~~~~-   83 (186)
                      +|||+|.++||.++++|++ . ++|.| .|                    ++||+|  ..|+ ++++|...+  |.+++ 
T Consensus         1 ~DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C--------------------~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~   59 (634)
T 1yo8_A            1 ADPDGCLSNPCFPGAQCSSFPDGSWSCGFC--------------------PVGFLGNGTHCE-DLDECALVPDICFSTSK   59 (634)
T ss_dssp             ---CGGGGCCSCTTCCEEECTTSCEEECCC--------------------CTTBCSCSSSCC-BCCTTTTSCCCSCCCSS
T ss_pred             CcccccCCCCCCCCCEEecCCCCCeECCcC--------------------CCccCCCCCCcc-ccccccCCCCcccCCcc
Confidence            4789999999999999999 6 45887 65                    459996  7897 899998777  99888 


Q ss_pred             --eeeecCCCeEee-CCCCCcCCCC-----------CCCCcCCCCCCCC--CCCCCCCeeeeCC----CCeeeeeCCCCC
Q psy13160         84 --GCRVVSGSAVCF-CLPEYTGDPP-----------SVPCTLPLNPCHN--SPCGPNTQCSLLD----NGFAQCTCLPGY  143 (186)
Q Consensus        84 --~C~~~~~~~~C~-c~~g~~~~~~-----------~~~c~~~~~~C~~--~~C~~~~~C~~~~----~~~~~C~C~~g~  143 (186)
                        .|+++.++|.|. |.+||.+...           +..|. ++++|..  ++|.++++|+++.    ++| +|.|++||
T Consensus        60 ~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~-dideC~~~~~pC~~~~~Cvnt~~~~~GsY-~C~C~~Gy  137 (634)
T 1yo8_A           60 VPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCE-PENPCKDKTHNCHKHAECIYLGHFSDPMY-KCECQTGY  137 (634)
T ss_dssp             SCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEE-ECCTTTTTCCCCCTTEEEEECCTTCSSSE-EEEECTTE
T ss_pred             ccceeeccCceecccCCCCcccCccccccccccccCCCccc-ccccccCCCcccccCccccccccccccce-eeeccCCc
Confidence              999999999998 9999987631           22466 7899985  5899999999998    899 99999999


Q ss_pred             ccCCCCCCCCcc--CCCCCC
Q psy13160        144 VESPNTIRGCVE--RRQPCE  161 (186)
Q Consensus       144 ~~~~~~~~~c~~--~~~~C~  161 (186)
                      .+.   ++.|+.  ++++|.
T Consensus       138 ~Gd---G~~Ce~d~DiDeC~  154 (634)
T 1yo8_A          138 AGD---GLICGEDSDLDGWP  154 (634)
T ss_dssp             EES---SSSEEECTTSSSSC
T ss_pred             ccc---CcccccccCccccc
Confidence            986   568853  678886

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.67  E-value=2.9e-17  Score=108.85  Aligned_cols=105  Identities=24%  Similarity=0.623  Sum_probs=86.0

Q ss_pred             CCCCCCCCeeeecCCCeEeeCCCCCcCCC-----CCCCCcCCCCCCCCC---CCCCCCeeeeCCCCeeeeeCCCCCccCC
Q psy13160         76 PNPCGPYTGCRVVSGSAVCFCLPEYTGDP-----PSVPCTLPLNPCHNS---PCGPNTQCSLLDNGFAQCTCLPGYVESP  147 (186)
Q Consensus        76 ~~~c~~~~~C~~~~~~~~C~c~~g~~~~~-----~~~~c~~~~~~C~~~---~C~~~~~C~~~~~~~~~C~C~~g~~~~~  147 (186)
                      ..+|.+++.|++.   |.|.|.+||.+..     .+..|+ ++++|...   +|.+++.|+++.++| .|.|++||++..
T Consensus         6 ~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y-~C~C~~Gy~g~~   80 (143)
T 2bou_A            6 ARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSY-DCVCSPGYEPVS   80 (143)
T ss_dssp             CTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCE-EEEECTTEEETT
T ss_pred             cCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCe-EeECCCCcccCc
Confidence            4678888999764   7999999999842     223787 89999864   798889999999999 999999999863


Q ss_pred             CC-------CCCCccCCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        148 NT-------IRGCVERRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       148 ~~-------~~~c~~~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ..       +..|. ++++|..  ++|.++++|+|+ ++|+|.|++||+
T Consensus        81 ~~~~~~~~~~~~C~-dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~  128 (143)
T 2bou_A           81 GAKTFKNESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWK  128 (143)
T ss_dssp             CCSCBSSGGGCCEE-ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSC
T ss_pred             CccccccCCCCCcC-CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcc
Confidence            21       34784 8999973  789988999998 899999999995

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.66  E-value=1.4e-16  Score=126.86  Aligned_cols=112  Identities=30%  Similarity=0.680  Sum_probs=93.5

Q ss_pred             CCCCCCCCCCCCCCeeeecCC-CeEe-eCCCCCcCCCCCCCCcCCCCCCCCCC--CCCCC---eeeeCCCCeeeee-CCC
Q psy13160         70 EGDECSPNPCGPYTGCRVVSG-SAVC-FCLPEYTGDPPSVPCTLPLNPCHNSP--CGPNT---QCSLLDNGFAQCT-CLP  141 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~-~~~C-~c~~g~~~~~~~~~c~~~~~~C~~~~--C~~~~---~C~~~~~~~~~C~-C~~  141 (186)
                      ++++|..+||.+++.|+++.+ +|.| .|++||++...  .|+ ++++|...+  |.+++   +|+++.++| +|. |++
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~--~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY-~C~~C~~   77 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT--HCE-DLDECALVPDICFSTSKVPRCVNTQPGF-HCLPCPP   77 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS--SCC-BCCTTTTSCCCSCCCSSSCCEEECSSSE-EECCCCT
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC--Ccc-ccccccCCCCcccCCccccceeeccCce-ecccCCC
Confidence            578898899999999999885 5999 99999998543  898 899999777  99888   899999999 999 999


Q ss_pred             CCccCCC----------CCCCCccCCCCCCC--CCCCCCCeecCC-----CCCeeeCCCCCC
Q psy13160        142 GYVESPN----------TIRGCVERRQPCEP--NVCGAGAVCDPN-----RAPYCFCPEGTM  186 (186)
Q Consensus       142 g~~~~~~----------~~~~c~~~~~~C~~--~~C~~~~~C~~~-----~~~~C~C~~g~~  186 (186)
                      ||++...          .+..| .++++|..  ++|+++++|+++     ++|+|.|++||+
T Consensus        78 Gy~G~~c~g~g~~~~~~dg~~C-~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~  138 (634)
T 1yo8_A           78 RYRGNQPVGVGLEAAKTEKQVC-EPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYA  138 (634)
T ss_dssp             TEEECCCEESSSHHHHSCCCCE-EECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEE
T ss_pred             CcccCccccccccccccCCCcc-cccccccCCCcccccCccccccccccccceeeeccCCcc
Confidence            9998742          13457 48999985  589999999975     579999999984

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.64  E-value=6.3e-18  Score=114.34  Aligned_cols=131  Identities=23%  Similarity=0.492  Sum_probs=93.4

Q ss_pred             CCCCCCC-CCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCC----CCCccCCCCC--CCCC--CC--
Q psy13160         12 NDSLACK-PNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCP----FNMAFPEGDE--CSPN--PC--   79 (186)
Q Consensus        12 ~~~~~c~-~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~----~~~c~~~~~~--C~~~--~c--   79 (186)
                      +|||||. +++|. +++|+| +++|.|.|+                    +||.    |..|+ ++++  |...  ++  
T Consensus         1 ~dideC~~~~~C~-~~~C~n~~gsy~C~C~--------------------~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~   58 (162)
T 1uzk_A            1 TDVNECLDPTTCI-SGNCVNTPGSYICDCP--------------------PDFELNPTRVGCV-DTRSGNCYLDIRPRGD   58 (162)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTEEEEECC--------------------TTCEECTTSSBEE-CCCCEEEEEEC-----
T ss_pred             CccccCCCCCCCC-CCEeECCCCCEEEeCC--------------------CCCeECCCCCccc-CCCCCcccCCCcccCC
Confidence            4899997 58896 799999 999888654                    4897    78887 7776  7542  33  


Q ss_pred             CCCCeeeecCC----CeEeeCCCCCc-CCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCC--CCccCCCCCCC
Q psy13160         80 GPYTGCRVVSG----SAVCFCLPEYT-GDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLP--GYVESPNTIRG  152 (186)
Q Consensus        80 ~~~~~C~~~~~----~~~C~c~~g~~-~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~--g~~~~~~~~~~  152 (186)
                      ...+.|++..+    .|.|.|.+||. +.    .|+         .|..     +..++| .|.|++  ||++.. .+..
T Consensus        59 ~~~~~C~~~~~~~~~~~~C~C~~G~~~~~----~C~---------~C~~-----~~~~~y-~C~C~~g~G~~~~~-~~~~  118 (162)
T 1uzk_A           59 NGDTACSNEIGVGVSKASCCCSLGKAWGT----PCE---------MCPA-----VNTSEY-KILCPGGEGFRPNP-ITVI  118 (162)
T ss_dssp             -----CEEEEEEEECHHHHHTTTCCEETT----TTE---------ECCC-----TTSHHH-HHHCTTCTTEEECT-TTCC
T ss_pred             CCCCcccCCcCCcccCceeeCCCCCCcCC----Ccc---------cCCC-----CCCCCc-eeECCCCCCcccCC-CCCc
Confidence            24678888766    78999999997 43    453         1221     245678 999988  898763 1234


Q ss_pred             CccCCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        153 CVERRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       153 c~~~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      | ++||+|..  ++|.+ ++|+|+ ++|+|.|++||+
T Consensus       119 c-~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~  153 (162)
T 1uzk_A          119 L-EDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYY  153 (162)
T ss_dssp             E-EECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCC
T ss_pred             c-CccccccCCCCCcCC-CEeEcCCCCEEeeCCCCcc
Confidence            5 59999974  56974 799998 899999999995

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.64  E-value=5.6e-18  Score=117.14  Aligned_cols=119  Identities=19%  Similarity=0.434  Sum_probs=94.8

Q ss_pred             CCCCC---CCCCCCCCCC----CCCCCCCCeecc-C-----CCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCC
Q psy13160          4 AYLPP---YPSNDSLACK----PNPCDPYSSCSV-Y-----SEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPE   70 (186)
Q Consensus         4 ~~~~~---~~~~~~~~c~----~~~C~~~~~C~~-~-----~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~   70 (186)
                      +|+|.   .| +|||+|.    +++|.+++.|++ .     ++|.|.|+                    +||.|..+.-.
T Consensus        32 G~~g~~~~~C-~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~--------------------~G~~g~~~~C~   90 (186)
T 1z1y_A           32 GLVHLSENTC-EEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCI--------------------EGYTLXEDTCV   90 (186)
T ss_dssp             TEEEEETTEE-EECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEEC--------------------TTEEEETTEEE
T ss_pred             CCccCCCCcc-CCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCC--------------------CCCccCCCCCC
Confidence            45554   45 3789998    788999999999 7     78887654                    59987644324


Q ss_pred             CCCCCCCCCCCCCeee----ecCCCeEeeCCCCCcCCC-CCCCCcCC--CCCCCCCCC-CCCCeeeeCCCCeeeeeCCCC
Q psy13160         71 GDECSPNPCGPYTGCR----VVSGSAVCFCLPEYTGDP-PSVPCTLP--LNPCHNSPC-GPNTQCSLLDNGFAQCTCLPG  142 (186)
Q Consensus        71 ~~~C~~~~c~~~~~C~----~~~~~~~C~c~~g~~~~~-~~~~c~~~--~~~C~~~~C-~~~~~C~~~~~~~~~C~C~~g  142 (186)
                      +++|...+|.+++.|+    +..++|.|.|.+||.+.+ .+..|+ +  +++|. .+| ..+++|+++.++| +|.|++|
T Consensus        91 ~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~-~~~~~~C~-~~C~~~~~~C~n~~g~y-~C~C~~G  167 (186)
T 1z1y_A           91 LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCT-XTGETACQ-LXCNTDNEVCXNVEGVY-XCQCMEG  167 (186)
T ss_dssp             EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEE-EEECCCCC-CCCCTTTEEEEEETTEE-EEEECTT
T ss_pred             CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcce-EcCCCccc-ccccccCcceecCCCCe-eeECCCC
Confidence            7889888999889998    666899999999999832 222787 4  47897 489 8889999999999 9999999


Q ss_pred             CccC
Q psy13160        143 YVES  146 (186)
Q Consensus       143 ~~~~  146 (186)
                      |++.
T Consensus       168 ~~g~  171 (186)
T 1z1y_A          168 FTFD  171 (186)
T ss_dssp             CEEE
T ss_pred             CccC
Confidence            9986

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.63  E-value=2.8e-16  Score=104.11  Aligned_cols=115  Identities=25%  Similarity=0.598  Sum_probs=87.3

Q ss_pred             CCCCCCCCeeccCCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCC---------CCccCCCCCCCCC---CCCCCCeee
Q psy13160         19 PNPCDPYSSCSVYSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPF---------NMAFPEGDECSPN---PCGPYTGCR   86 (186)
Q Consensus        19 ~~~C~~~~~C~~~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~---------~~c~~~~~~C~~~---~c~~~~~C~   86 (186)
                      +++|..++.|++  .|.                    |.|.+||+|         ..|+ ++++|...   +|.+++.|+
T Consensus         6 ~~~C~~~~~C~~--~~~--------------------C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~   62 (143)
T 2bou_A            6 ARWCPQDSSCVN--ATA--------------------CRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCW   62 (143)
T ss_dssp             CTTCCTTEEESS--SSC--------------------EEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEE
T ss_pred             cCcCCCCCEEcC--CCE--------------------EeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEE
Confidence            356777788866  344                    456668886         5785 88999864   898889999


Q ss_pred             ecCCCeEeeCCCCCcCCCC--------CCCCcCCCCCCCC--CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccC
Q psy13160         87 VVSGSAVCFCLPEYTGDPP--------SVPCTLPLNPCHN--SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVER  156 (186)
Q Consensus        87 ~~~~~~~C~c~~g~~~~~~--------~~~c~~~~~~C~~--~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~  156 (186)
                      ++.++|.|.|.+||.+...        +..|+ ++++|..  .+|.++++|+++.++| +|.|++||++.. .++.|. +
T Consensus        63 n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~-dideC~~~~~~C~~~~~C~n~~g~y-~C~C~~Gy~g~~-~~~~C~-~  138 (143)
T 2bou_A           63 NTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSY-SCRCRPGWKPRH-GIPNNQ-K  138 (143)
T ss_dssp             ECSSCEEEEECTTEEETTCCSCBSSGGGCCEE-ECCHHHHTCCCCCTTSEEEECSSCE-EEECCSSSCBCT-TCCSSB-T
T ss_pred             cCCCCeEeECCCCcccCcCccccccCCCCCcC-CccCccCcCCCCCCCCEEECCCCCE-EeeCCCCcccCC-CCccCc-c
Confidence            9999999999999987632        22676 8899974  6899889999999999 999999999864 234452 4


Q ss_pred             CCCC
Q psy13160        157 RQPC  160 (186)
Q Consensus       157 ~~~C  160 (186)
                      ++.|
T Consensus       139 ~~~C  142 (143)
T 2bou_A          139 DTVC  142 (143)
T ss_dssp             TCCB
T ss_pred             CCcc
Confidence            4433

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.59  E-value=1.4e-16  Score=102.00  Aligned_cols=100  Identities=23%  Similarity=0.571  Sum_probs=80.5

Q ss_pred             CCCCCCCCCCCCCCeeeec-CCCeEeeCCCCCcCCCCCCCCcCCCC----CCCCCCCCCCCeeeeCCCCeeeeeCCCCCc
Q psy13160         70 EGDECSPNPCGPYTGCRVV-SGSAVCFCLPEYTGDPPSVPCTLPLN----PCHNSPCGPNTQCSLLDNGFAQCTCLPGYV  144 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~-~~~~~C~c~~g~~~~~~~~~c~~~~~----~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~  144 (186)
                      ++|+|.++||.+  +|+++ .++|.|.|.+||.+.    ..  +++    +|...+|.  +.|++ .++| .|.|++||+
T Consensus         3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~----~~--~~~~C~~~C~~~~C~--~~C~~-~~~y-~C~C~~Gy~   70 (118)
T 1dx5_I            3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPI----PH--EPHRCQMFCNQTACP--ADCDP-NTQA-SCECPEGYI   70 (118)
T ss_dssp             CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEE----TT--EEEEEEECCCSSEEE--CEECT-TSTT-CEECCTTEE
T ss_pred             ccccCCCCCCCC--CCCCCCCCCEEeECCCCcccc----CC--CCCccccccCCCCCC--CcccC-CCCe-EeECCCCcc
Confidence            678898889974  99999 899999999999987    22  233    34445555  57887 5789 999999999


Q ss_pred             cCCCCCCCCccCCCCCCC-CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        145 ESPNTIRGCVERRQPCEP-NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       145 ~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +..  +..| .++++|.. ++|  +++|+|+ ++|+|.|++||+
T Consensus        71 ~~~--g~~C-~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~  109 (118)
T 1dx5_I           71 LDD--GFIC-TDIDECENGGFC--SGVCHNLPGTFECICGPDSA  109 (118)
T ss_dssp             EET--TTEE-EECCHHHHCSSC--SSEEEECSSSEEEEECSSSS
T ss_pred             CCC--CCcc-ccccccCCCCCC--cCeEEeCCCCEEEECCCCCc
Confidence            653  4588 59999986 889  6799998 899999999995

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.56  E-value=5.6e-15  Score=110.04  Aligned_cols=141  Identities=26%  Similarity=0.644  Sum_probs=61.2

Q ss_pred             CCCCCCCCCCCeeccCCCeeEecCC------CCCC--CCCCCCC--Cc--ceeeCCCCCCCCCccCCCCCCCCCCCCCCC
Q psy13160         16 ACKPNPCDPYSSCSVYSEHVAMCDP------CSGP--QAPWLPH--CR--PECLCNSDCPFNMAFPEGDECSPNPCGPYT   83 (186)
Q Consensus        16 ~c~~~~C~~~~~C~~~~~~~C~C~~------c~~~--~~~C~~~--C~--~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~   83 (186)
                      +| +++|.+++.|.+  .+.|.|.+      |+.+  ...|...  |.  +.|.|.+||.|..|+  .+.| ..+|.+++
T Consensus       150 ~C-~~~C~~~G~C~~--~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~--~~~C-~~~C~~~G  223 (324)
T 2ygq_A          150 EC-PGGCRNGGFCNE--RRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCD--KANC-STTCFNGG  223 (324)
T ss_dssp             CC-SSCCCSSCEECT--TSCEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTC--BCCC-SSCCCSSC
T ss_pred             CC-CCCCCCCCEECC--CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcc--cCcC-CCCCCCCC
Confidence            45 467888899965  57899988      5422  1234433  55  889999999999996  3457 46788889


Q ss_pred             eeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCC
Q psy13160         84 GCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPN  163 (186)
Q Consensus        84 ~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~  163 (186)
                      .|+.   .+.|.|.+||.|.    .|+  +++|. .+|.+++.|..   .+ .|.|++||.|.     .|+  ++.|. .
T Consensus       224 ~C~~---~~~C~C~~G~~G~----~C~--~~~C~-~~C~~~g~C~~---~~-~C~C~~G~~G~-----~C~--~~~C~-~  281 (324)
T 2ygq_A          224 TCFY---PGKCICPPGLEGE----QCE--ISKCP-QPCRNGGKCIG---KS-KCKCSKGYQGD-----LCS--KPVCE-P  281 (324)
T ss_dssp             CBSC---SSCBCCCTTCCTT----TTC-----------------------------------------------------
T ss_pred             eeCC---CCeeeCCCCccCC----CCC--cCcCC-CcCCCCCEECC---CC-EEECCCCCcCC-----CCc--CCCCC-C
Confidence            9965   3689999999998    885  56675 68888889974   46 89999999876     774  36674 5


Q ss_pred             CCCCCCeecCCCCCeeeCCCCCC
Q psy13160        164 VCGAGAVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       164 ~C~~~~~C~~~~~~~C~C~~g~~  186 (186)
                      +|.++++|.+  .++|.|++||+
T Consensus       282 ~C~~~g~C~~--~~~C~C~~G~~  302 (324)
T 2ygq_A          282 GCGAHGTCHE--PNKCQCQEGWH  302 (324)
T ss_dssp             -----------------------
T ss_pred             CCCCCCEECC--CCEeECCCCCc
Confidence            7888889986  46899999985

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.54  E-value=3e-18  Score=122.53  Aligned_cols=165  Identities=4%  Similarity=-0.188  Sum_probs=120.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCeecc-CCCeeEecCC------CCCCCCCCC------CC-Cc--ceeeCCCCCCCCCcc
Q psy13160          5 YLPPYPSNDSLACKPNPCDPYSSCSV-YSEHVAMCDP------CSGPQAPWL------PH-CR--PECLCNSDCPFNMAF   68 (186)
Q Consensus         5 ~~~~~~~~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~------c~~~~~~C~------~~-C~--~~C~C~~g~~~~~c~   68 (186)
                      ++|-++..+++++. .+|.++++|++ .++|+|.|+.      |++++++|.      .. |.  ..|     |.|..|+
T Consensus        24 ~~g~~~~~n~~~~~-~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc-----~~G~~c~   97 (267)
T 4fbr_A           24 LIGARDKQNVVALD-IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW-----VLGARDK   97 (267)
T ss_dssp             ECCCCSSCCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEE-----ECCCCSS
T ss_pred             eeccccccccccCC-CCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCee-----eccCccc
Confidence            45566666665554 37889999999 9999999998      887777743      32 33  333     4577886


Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCC------CC-----------------------CC
Q psy13160         69 PEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNP------CH-----------------------NS  119 (186)
Q Consensus        69 ~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~------C~-----------------------~~  119 (186)
                       ..++|.+.||.++++|++...+|.|.|+.||++.    .|+.++++      +.                       +.
T Consensus        98 -~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~----~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~  172 (267)
T 4fbr_A           98 -QNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSE----VTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDA  172 (267)
T ss_dssp             -CCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE----ECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEE
T ss_pred             -cccccCCCCCCCCCEEecCCccEEeeCCCCcccc----CCCCCcccccccCCcCCccccCCcceecccccccccccCCC
Confidence             5568888999999999999899999999999887    56544433      11                       22


Q ss_pred             CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCC------CCC-----------------------CCCCCCe
Q psy13160        120 PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPC------EPN-----------------------VCGAGAV  170 (186)
Q Consensus       120 ~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C------~~~-----------------------~C~~~~~  170 (186)
                      +|.++++|++...+| +|.|++||++.     .|+.++++|      ...                       +|.++++
T Consensus       173 ~c~ngg~C~dg~~~y-~C~Cp~Gf~G~-----~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGt  246 (267)
T 4fbr_A          173 KSNDGGKTLSGTMTY-NGEGPIGFRGT-----LTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGK  246 (267)
T ss_dssp             ECSSTTSEEEEEEEE-TTSCCEEEEEE-----EEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTS
T ss_pred             CCCCCCEeeCCCCCe-EEeCCCCcccc-----ccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCE
Confidence            477778898888899 99999999975     665555552      111                       4556677


Q ss_pred             ecCC-CCCeeeCCCCCC
Q psy13160        171 CDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       171 C~~~-~~~~C~C~~g~~  186 (186)
                      |++. .+|.|.|++||+
T Consensus       247 C~dg~~sy~CeCp~GF~  263 (267)
T 4fbr_A          247 TLAGTMIYNGEGPIGFR  263 (267)
T ss_dssp             EEEEEEEETTSCCEEEE
T ss_pred             eeCCCcceeecCCCCcc
Confidence            7765 678899998874

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.52  E-value=5.3e-16  Score=99.29  Aligned_cols=103  Identities=23%  Similarity=0.534  Sum_probs=78.4

Q ss_pred             CCCCCCCCCCCCCCCeecc--CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCCCC----CCCCCCCCCCee
Q psy13160         12 NDSLACKPNPCDPYSSCSV--YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDE----CSPNPCGPYTGC   85 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~--~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~~~----C~~~~c~~~~~C   85 (186)
                      +|||+|.++||..  +|++  .++|.|.|                    ++||.|...  ++++    |...+|.  +.|
T Consensus         2 ~dideC~~~pC~~--~C~~~~~g~y~C~C--------------------~~Gy~g~~~--~~~~C~~~C~~~~C~--~~C   55 (118)
T 1dx5_I            2 EPVDPCFRANCEY--QCQPLDQTSYLCVC--------------------AEGFAPIPH--EPHRCQMFCNQTACP--ADC   55 (118)
T ss_dssp             CCCCGGGGCCCSS--EEEECSSSCEEEEC--------------------CTTEEEETT--EEEEEEECCCSSEEE--CEE
T ss_pred             CccccCCCCCCCC--CCCCCCCCCEEeEC--------------------CCCccccCC--CCCccccccCCCCCC--Ccc
Confidence            4899999999973  9998  56777755                    458887643  2233    4344554  578


Q ss_pred             eecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC-CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160         86 RVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus        86 ~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ++ .++|.|.|.+||.+.. +..|+ ++++|.. ++|  +++|+++.++| +|.|++||++.
T Consensus        56 ~~-~~~y~C~C~~Gy~~~~-g~~C~-dideC~~~~~C--~~~C~n~~g~y-~C~C~~G~~g~  111 (118)
T 1dx5_I           56 DP-NTQASCECPEGYILDD-GFICT-DIDECENGGFC--SGVCHNLPGTF-ECICGPDSALA  111 (118)
T ss_dssp             CT-TSTTCEECCTTEEEET-TTEEE-ECCHHHHCSSC--SSEEEECSSSE-EEEECSSSSCE
T ss_pred             cC-CCCeEeECCCCccCCC-CCccc-cccccCCCCCC--cCeEEeCCCCE-EEECCCCCccC
Confidence            77 5889999999998432 22887 8999986 788  68999999999 99999999875

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.50  E-value=2.6e-14  Score=87.06  Aligned_cols=86  Identities=16%  Similarity=0.458  Sum_probs=70.4

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc-CCCCCCCCCCCCCCCeeeeCC-
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT-LPLNPCHNSPCGPNTQCSLLD-  131 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~-~~~~~C~~~~C~~~~~C~~~~-  131 (186)
                      |.|.|..||.|..|  ++++|...||.      +..+.|.|.|.+||.      .|+ .++++|.++||.++++|++.. 
T Consensus         2 y~C~C~~g~~g~~c--~~~~c~~~pC~------n~~~~y~C~C~~G~~------~C~~~~~~~C~~~pC~ngg~C~~~~~   67 (91)
T 1tpg_A            2 YQVICRDEKTQMIY--QQHQSWLRPVL------RSNRVEYCWCNSGRA------QCHSVPVKSCSEPRCFNGGTCQQALY   67 (91)
T ss_dssp             CCCCCBCSSSCCBC--CSSCEEEEECS------SSSCEEEEECSSSCC------BCCEECEEECSSCCSCTTCEEEEESS
T ss_pred             eeeECCCCCcCCeE--CCCcccCCccc------cCCCCcEeECCCCCc------ccccCcCCcccCCCCCCCCEeecCCC
Confidence            67899999999988  47778666654      446789999999995      464 367899999999999999987 


Q ss_pred             -CCeeeeeCCCCCccCCCCCCCCccCCCC
Q psy13160        132 -NGFAQCTCLPGYVESPNTIRGCVERRQP  159 (186)
Q Consensus       132 -~~~~~C~C~~g~~~~~~~~~~c~~~~~~  159 (186)
                       ++| .|.|++||+|.     .|+.++++
T Consensus        68 ~~~~-~C~C~~G~~G~-----~Ce~~ide   90 (91)
T 1tpg_A           68 FSDF-VCQCPEGFAGK-----SCEIDTRA   90 (91)
T ss_dssp             SSCE-EEECCTTCBSS-----SCCBCSSC
T ss_pred             CCCe-EeECCCCCcCC-----cCCcCCCC
Confidence             899 99999999875     78767664

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.49  E-value=1.2e-13  Score=111.48  Aligned_cols=138  Identities=22%  Similarity=0.572  Sum_probs=106.9

Q ss_pred             CCCCCCCCCCCeecc-CCCee---EecCC------CCCCC--------CCCCC----C-Cc-------ceeeCC----CC
Q psy13160         16 ACKPNPCDPYSSCSV-YSEHV---AMCDP------CSGPQ--------APWLP----H-CR-------PECLCN----SD   61 (186)
Q Consensus        16 ~c~~~~C~~~~~C~~-~~~~~---C~C~~------c~~~~--------~~C~~----~-C~-------~~C~C~----~g   61 (186)
                      +|...+|.+++.|.+ .|.+.   |.|.+      |+.++        ++|..    . |.       +.|.|.    .|
T Consensus       436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~G  515 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGK  515 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSSCC
T ss_pred             CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCCCC
Confidence            467888988899998 88888   99988      65444        45653    1 43       889999    99


Q ss_pred             CCCCCccCCCCCCCC---CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc--CCCCCCCC---CCCCCCCeeeeCCCC
Q psy13160         62 CPFNMAFPEGDECSP---NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT--LPLNPCHN---SPCGPNTQCSLLDNG  133 (186)
Q Consensus        62 ~~~~~c~~~~~~C~~---~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~--~~~~~C~~---~~C~~~~~C~~~~~~  133 (186)
                      |.|..|+.+.++|..   .+|..++.|..    +.|.|.+||.|.    .|+  .++++|..   .+|.+++.|.+.   
T Consensus       516 y~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~----~CeC~~~~~~C~~~~g~~C~~~G~C~~g---  584 (690)
T 3fcs_B          516 ITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGY----YCNCTTRTDTCMSSNGLLCSGRGKCECG---  584 (690)
T ss_dssp             CBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESS----SSCEECCCTTTBCTTSSBTSSSCEEETT---
T ss_pred             eeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCC----CCccCCCCCcccCCCCCCCCCCCEEeCC---
Confidence            999999867788864   46888889965    689999999999    886  45778875   579999999763   


Q ss_pred             eeeeeC-CCCCccCCCCCCCCccCCCCCCCCCCCCCCeecC
Q psy13160        134 FAQCTC-LPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDP  173 (186)
Q Consensus       134 ~~~C~C-~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~  173 (186)
                        .|.| .+||+|.     .|+. -..| +.+|.+++.|++
T Consensus       585 --~C~C~~~Gy~G~-----~Ce~-C~~C-~~~C~~~g~Cv~  616 (690)
T 3fcs_B          585 --SCVCIQPGSYGD-----TCEK-CPTC-PDACTFKKECVE  616 (690)
T ss_dssp             --EEECCSTTCBST-----TSCB-CTTS-CCTTTSCCGGGT
T ss_pred             --EEECCCCCccCC-----CcCc-CCCC-CCCCCCCCCccc
Confidence              8999 9999876     7852 2345 567888888874

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.44  E-value=9.2e-16  Score=102.05  Aligned_cols=111  Identities=28%  Similarity=0.542  Sum_probs=76.3

Q ss_pred             CCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCC-----------CCCC--CCCCCCCeeeeCCCC--
Q psy13160         69 PEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLN-----------PCHN--SPCGPNTQCSLLDNG--  133 (186)
Q Consensus        69 ~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~-----------~C~~--~~C~~~~~C~~~~~~--  133 (186)
                      .++|+|.++||.+ ++|+++.++|.|.|.+||.+...+..|. ++.           .|..  ..|.....|.+..+.  
T Consensus         2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~-~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~   79 (147)
T 2w86_A            2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICI-ETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAW   79 (147)
T ss_dssp             CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEE-ECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEE
T ss_pred             CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeec-CCCCCcccCCCCCCccccCCCccccCCccccCcCccc
Confidence            4788998899975 6999999999999999999874443453 221           1110  011111112222222  


Q ss_pred             --------eeeeeCCCCCccCCCCCCCCccCCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        134 --------FAQCTCLPGYVESPNTIRGCVERRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       134 --------~~~C~C~~g~~~~~~~~~~c~~~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                              | .|.|++||++.  .++.|+ +||+|..  ++|.+ ++|+|+ ++|+|.|++||+
T Consensus        80 g~~C~~c~~-~C~C~~Gy~~~--~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~  138 (147)
T 2w86_A           80 GSPCTLCQV-DPICGKGYSRI--KGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT  138 (147)
T ss_dssp             TTTTEECCC-CTTTCTTEEEE--ETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred             CCCcccCCC-cccCCCccccC--CCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence                    6 78999999742  245895 9999974  56974 699998 899999999995

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.43  E-value=9.4e-14  Score=82.96  Aligned_cols=70  Identities=27%  Similarity=0.667  Sum_probs=59.4

Q ss_pred             CcCCCCCCCC-CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCC-CCCCCCCCeecCC-CCCeeeCCCCC
Q psy13160        109 CTLPLNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCE-PNVCGAGAVCDPN-RAPYCFCPEGT  185 (186)
Q Consensus       109 c~~~~~~C~~-~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~  185 (186)
                      |. ++++|.. .+|.+ +.|+++.++| +|.|++||.+.   +..| .++++|. .++|.+ ++|+|+ ++|+|.|++||
T Consensus         2 C~-dideC~~~~~C~~-g~C~n~~g~y-~C~C~~Gy~~~---g~~C-~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~   73 (82)
T 1emn_A            2 AV-DMDECKEPDVCKH-GQCINTDGSY-RCECPFGYILA---GNEC-VDTDECSVGNPCGN-GTCKNVIGGFECTCEEGF   73 (82)
T ss_dssp             CC-CCCSSSSTTSCSS-SEECCCSSCC-CEECCTTEEEE---TTEE-EECCGGGTCCTTSS-SCEEECSSSEEECCSSSS
T ss_pred             CC-ccccCCCCCCcCC-CEEEecCCCE-EEECCCCeECC---CCcc-CCcccccCCCCCCC-CEeECCCCCEEeECCCCe
Confidence            44 7889985 78975 8999999999 99999999864   5589 5999997 678974 699998 89999999999


Q ss_pred             C
Q psy13160        186 M  186 (186)
Q Consensus       186 ~  186 (186)
                      +
T Consensus        74 ~   74 (82)
T 1emn_A           74 E   74 (82)
T ss_dssp             C
T ss_pred             E
Confidence            5

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.43  E-value=2.7e-14  Score=97.01  Aligned_cols=109  Identities=23%  Similarity=0.523  Sum_probs=83.6

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCC-CCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCC-CCCCCeeeeCC
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCG-PYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSP-CGPNTQCSLLD  131 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~-~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~-C~~~~~C~~~~  131 (186)
                      ..|.|.+||+|..|+  .++|. ..|. ..+.|++   .+.|.|.+||.|.    .|+    +|...+ |.+ ++|+   
T Consensus        50 g~C~C~~G~~G~~C~--~~~C~-~~C~~~~g~C~~---~~~C~C~~G~~G~----~C~----~C~~~~~C~~-g~C~---  111 (169)
T 2vj2_A           50 GNKTCMEGWMGPECN--RAICR-QGCSPKHGSCKL---PGDCRCQYGWQGL----YCD----KCIPHPGCVH-GICN---  111 (169)
T ss_dssp             CCEEECTTEESTTSC--EECCC-TTCCTTTEECSS---TTCCEECTTEESS----SSC----EECCCTTCSS-EECS---
T ss_pred             CeeECCCCCcCCCCC--CCCCC-CCCCCCCcccCC---CCeeECCCCCCCC----Ccc----cCCCCCCCCC-CCcC---
Confidence            467889999999996  34464 3454 4566754   5789999999988    774    255444 664 4776   


Q ss_pred             CCeeeeeCCCCCccCCCCCCCCccCCCCCCC-CCCCCCCeecCC--CCCeeeCCCCCC
Q psy13160        132 NGFAQCTCLPGYVESPNTIRGCVERRQPCEP-NVCGAGAVCDPN--RAPYCFCPEGTM  186 (186)
Q Consensus       132 ~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~--~~~~C~C~~g~~  186 (186)
                      +++ .|.|++||+|.     .|+.++++|.. .+|.++++|+++  ++|+|.|++||+
T Consensus       112 ~~~-~C~C~~G~~G~-----~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~  163 (169)
T 2vj2_A          112 EPW-QCLCETNWGGQ-----LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYS  163 (169)
T ss_dssp             STT-CCEECTTEETT-----TTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred             CCC-EEeCCCCCCCC-----cccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence            467 99999999875     78768899974 789999999985  789999999995

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.42  E-value=2.9e-15  Score=99.64  Aligned_cols=125  Identities=18%  Similarity=0.349  Sum_probs=75.7

Q ss_pred             CCCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCc--ceeeCCCCCCCCCccCCCCCCCCC-------CCC
Q psy13160         11 SNDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCR--PECLCNSDCPFNMAFPEGDECSPN-------PCG   80 (186)
Q Consensus        11 ~~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~--~~C~C~~g~~~~~c~~~~~~C~~~-------~c~   80 (186)
                      ++|||+|.++||. +++|++ +++|.|.|++-.. .+.+...|.  ....|..+|.+..|+..+++|...       ...
T Consensus         1 ~~dideC~~~pC~-ng~C~n~~g~y~C~C~~G~~-g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~   78 (147)
T 2w86_A            1 SADIDECESSPCI-NGVCKNSPGSFICECSSEST-LDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAA   78 (147)
T ss_dssp             CCCCCGGGGCCSB-TSEEEEETTEEEEECCTTEE-ECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSE
T ss_pred             CCcCccCcCCCCC-CCEeECCCCCEEeECCCCcc-cCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcc
Confidence            3689999999997 579999 9999998765000 000000011  112233333344443333332110       000


Q ss_pred             CCCeeeecCCCeEeeCCCCCc---CCCCCCCCcCCCCCCCC--CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160         81 PYTGCRVVSGSAVCFCLPEYT---GDPPSVPCTLPLNPCHN--SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus        81 ~~~~C~~~~~~~~C~c~~g~~---~~~~~~~c~~~~~~C~~--~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      .+..|..  -.|.|.|.+||.   +.    .|+ +|++|..  .+|.+ ++|+++.++| +|.|++||++.
T Consensus        79 ~g~~C~~--c~~~C~C~~Gy~~~~g~----~C~-dideC~~~~~~C~~-g~C~n~~g~y-~C~C~~Gy~g~  140 (147)
T 2w86_A           79 WGSPCTL--CQVDPICGKGYSRIKGT----QCE-DIDECEVFPGVCKN-GLCVNTRGSF-KCQCPSGMTLD  140 (147)
T ss_dssp             ETTTTEE--CCCCTTTCTTEEEEETT----EEE-ECCHHHHSTTCSSS-SEEEEETTEE-EEECCTTCCBC
T ss_pred             cCCCccc--CCCcccCCCccccCCCC----ccC-ccccccCCCCCCCC-CEEECCCCCE-EeeCCCCCccC
Confidence            0111110  126788999996   55    898 8999984  45885 5999999999 99999999876

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.41  E-value=6.3e-14  Score=84.54  Aligned_cols=71  Identities=31%  Similarity=0.797  Sum_probs=58.6

Q ss_pred             CCCCCCCCC--CCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCC--CCCCCeecCC-CCCeeeCCCCCC
Q psy13160        112 PLNPCHNSP--CGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNV--CGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       112 ~~~~C~~~~--C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~--C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ++++|...+  |.+ ++|+++.++| .|.|++||.+....+..|. +|++|...+  |. +++|+|+ ++|+|.|++||+
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~y-~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~   77 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGDF-ECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ   77 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTEE-EECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred             ccccccCCCCCCCC-CEEECCCCCE-EeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcc
Confidence            678898655  864 5999999999 9999999986544467895 999997554  75 5799998 899999999995

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.34  E-value=6.1e-17  Score=115.76  Aligned_cols=135  Identities=3%  Similarity=-0.205  Sum_probs=91.2

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCeecc-CCCeeEecCC------CCCCCCCCCCC-CcceeeC---CCCCCCCCccCCCCC
Q psy13160          5 YLPPYPSNDSLACKPNPCDPYSSCSV-YSEHVAMCDP------CSGPQAPWLPH-CRPECLC---NSDCPFNMAFPEGDE   73 (186)
Q Consensus         5 ~~~~~~~~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~------c~~~~~~C~~~-C~~~C~C---~~g~~~~~c~~~~~~   73 (186)
                      |+|..+.. +++|.+.||.++++|++ .++|.|.|+.      |+.++++|... +.....|   ...+.|.+|+..++ 
T Consensus        91 ~~G~~c~~-~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~-  168 (267)
T 4fbr_A           91 VLGARDKQ-NIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVI-  168 (267)
T ss_dssp             ECCCCSSC-CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEE-
T ss_pred             eccCcccc-ccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccc-
Confidence            45666654 35788888888899999 8889999888      77666664432 1111111   12234677764443 


Q ss_pred             CCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCC------CC-----------------------CCCCC
Q psy13160         74 CSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH------NS-----------------------PCGPN  124 (186)
Q Consensus        74 C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~------~~-----------------------~C~~~  124 (186)
                      +.+.+|.++++|++...+|+|.|++||++.    .|+.+++++.      ..                       +|..+
T Consensus       169 c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~----~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ng  244 (267)
T 4fbr_A          169 NVDAKSNDGGKTLSGTMTYNGEGPIGFRGT----LTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDG  244 (267)
T ss_dssp             EEEEECSSTTSEEEEEEEETTSCCEEEEEE----EEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSST
T ss_pred             cCCCCCCCCCEeeCCCCCeEEeCCCCcccc----ccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCC
Confidence            446778899999998899999999999987    6765555421      11                       35556


Q ss_pred             CeeeeCCCCeeeeeCCCCCccC
Q psy13160        125 TQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       125 ~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ++|++...+| .|.|++||+|.
T Consensus       245 GtC~dg~~sy-~CeCp~GF~G~  265 (267)
T 4fbr_A          245 GKTLAGTMIY-NGEGPIGFRAR  265 (267)
T ss_dssp             TSEEEEEEEE-TTSCCEEEEEE
T ss_pred             CEeeCCCcce-eecCCCCcccc
Confidence            6777766777 78888887763

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.33  E-value=1.5e-12  Score=77.68  Aligned_cols=69  Identities=33%  Similarity=0.809  Sum_probs=60.5

Q ss_pred             CCCCCCC-CCCCCCCeeeecCCCeEeeCCCCCc--CCCCCCCCcCCCCCCC-CCCCCCCCeeeeCCCCeeeeeCCCCCcc
Q psy13160         70 EGDECSP-NPCGPYTGCRVVSGSAVCFCLPEYT--GDPPSVPCTLPLNPCH-NSPCGPNTQCSLLDNGFAQCTCLPGYVE  145 (186)
Q Consensus        70 ~~~~C~~-~~c~~~~~C~~~~~~~~C~c~~g~~--~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~~~~~~~C~C~~g~~~  145 (186)
                      ++++|.. .+|.+ +.|+++.++|.|.|.+||.  +.    .|+ ++++|. .++|.+ ++|+++.++| .|.|++||++
T Consensus         4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~----~C~-dideC~~~~~C~~-~~C~n~~g~y-~C~C~~G~~g   75 (82)
T 1emn_A            4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGN----ECV-DTDECSVGNPCGN-GTCKNVIGGF-ECTCEEGFEP   75 (82)
T ss_dssp             CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETT----EEE-ECCGGGTCCTTSS-SCEEECSSSE-EECCSSSSCC
T ss_pred             ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCC----ccC-CcccccCCCCCCC-CEeECCCCCE-EeECCCCeEe
Confidence            7889975 78875 8999999999999999997  55    897 899997 678975 6999999999 9999999987


Q ss_pred             C
Q psy13160        146 S  146 (186)
Q Consensus       146 ~  146 (186)
                      .
T Consensus        76 ~   76 (82)
T 1emn_A           76 G   76 (82)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.32  E-value=1.2e-12  Score=78.88  Aligned_cols=75  Identities=27%  Similarity=0.579  Sum_probs=59.4

Q ss_pred             CCCCCCCCCC--CCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCC-----CCCccCCCCCCCCCC--CCC
Q psy13160         12 NDSLACKPNP--CDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCP-----FNMAFPEGDECSPNP--CGP   81 (186)
Q Consensus        12 ~~~~~c~~~~--C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~-----~~~c~~~~~~C~~~~--c~~   81 (186)
                      +|||+|..++  |. ++.|++ .++|.|.|+                    +||.     +..|+ ++++|...+  |. 
T Consensus         1 ~dideC~~~~~~C~-~g~C~n~~g~y~C~C~--------------------~Gy~~~~~~g~~C~-dideC~~~~~~C~-   57 (86)
T 1lmj_A            1 TDIDECRISPDLCG-RGQCVNTPGDFECKCD--------------------EGYESGFMMMKNCM-DIDECQRDPLLCR-   57 (86)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTEEEECCC--------------------SSEEECTTTSSSEE-ECCHHHHCSSTTT-
T ss_pred             CccccccCCCCCCC-CCEEECCCCCEEeeCC--------------------CCcCccCCCCCccC-CcccccCCCCcCC-
Confidence            3799998665  95 469999 999888654                    4776     67886 899997665  54 


Q ss_pred             CCeeeecCCCeEeeCCCCCcCCCCCCCC
Q psy13160         82 YTGCRVVSGSAVCFCLPEYTGDPPSVPC  109 (186)
Q Consensus        82 ~~~C~~~~~~~~C~c~~g~~~~~~~~~c  109 (186)
                      .+.|+++.++|.|.|.+||.+.+.++.|
T Consensus        58 ~~~C~n~~g~y~C~C~~G~~~~~~~~~C   85 (86)
T 1lmj_A           58 GGVCHNTEGSYRCECPPGHQLSPNISAC   85 (86)
T ss_dssp             TSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence            5799999999999999999987554333

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.30  E-value=6.8e-13  Score=80.12  Aligned_cols=70  Identities=29%  Similarity=0.725  Sum_probs=58.3

Q ss_pred             CCCCCCCCC--CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCC--CCCc
Q psy13160         70 EGDECSPNP--CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCL--PGYV  144 (186)
Q Consensus        70 ~~~~C~~~~--c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~--~g~~  144 (186)
                      ++++|...+  | +.+.|+++.++|.|.|.+||.+.+.+..|+ ++++|..++|.  ++|+++.++| .|.|+  +||.
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y-~C~C~g~~G~~   75 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGY-TCYCDGKKGFK   75 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSC-CEECCSSSCCB
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCE-EEECCCCcCCc
Confidence            578888766  7 678999999999999999999654444897 89999888887  6899999999 99995  4543

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.30  E-value=8e-13  Score=80.39  Aligned_cols=76  Identities=24%  Similarity=0.367  Sum_probs=62.6

Q ss_pred             CeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCc-cCCCCCCCCCCCCCC
Q psy13160         91 SAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCV-ERRQPCEPNVCGAGA  169 (186)
Q Consensus        91 ~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~-~~~~~C~~~~C~~~~  169 (186)
                      +|.|.|.+||.+.    .|  ++++|+..||.      +..++| .|.|++||+       .|+ .++++|..++|.+++
T Consensus         1 sy~C~C~~g~~g~----~c--~~~~c~~~pC~------n~~~~y-~C~C~~G~~-------~C~~~~~~~C~~~pC~ngg   60 (91)
T 1tpg_A            1 SYQVICRDEKTQM----IY--QQHQSWLRPVL------RSNRVE-YCWCNSGRA-------QCHSVPVKSCSEPRCFNGG   60 (91)
T ss_dssp             CCCCCCBCSSSCC----BC--CSSCEEEEECS------SSSCEE-EEECSSSCC-------BCCEECEEECSSCCSCTTC
T ss_pred             CeeeECCCCCcCC----eE--CCCcccCCccc------cCCCCc-EeECCCCCc-------ccccCcCCcccCCCCCCCC
Confidence            4789999999988    77  57788766654      456788 999999995       575 478999989999999


Q ss_pred             eecCC---CCCeeeCCCCCC
Q psy13160        170 VCDPN---RAPYCFCPEGTM  186 (186)
Q Consensus       170 ~C~~~---~~~~C~C~~g~~  186 (186)
                      +|++.   ++|+|.|++||+
T Consensus        61 ~C~~~~~~~~~~C~C~~G~~   80 (91)
T 1tpg_A           61 TCQQALYFSDFVCQCPEGFA   80 (91)
T ss_dssp             EEEEESSSSCEEEECCTTCB
T ss_pred             EeecCCCCCCeEeECCCCCc
Confidence            99964   689999999984

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.29  E-value=4.9e-12  Score=94.22  Aligned_cols=106  Identities=24%  Similarity=0.549  Sum_probs=64.2

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNG  133 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~  133 (186)
                      +.|.|.+||.|..|+.  +.|. .+|.+++.|+.   .+.|.|.+||.|.    .|+  .+.|. .+|.++++|.+.   
T Consensus       165 ~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~----~C~--~~~C~-~~C~~~G~C~~~---  228 (324)
T 2ygq_A          165 RICECPDGFHGPHCEK--ALCT-PRCMNGGLCVT---PGFCICPPGFYGV----NCD--KANCS-TTCFNGGTCFYP---  228 (324)
T ss_dssp             SCEECCTTEESSSSCE--ESSS-SCCCTTCEECS---SCCEECCTTCBTT----TTC--BCCCS-SCCCSSCCBSCS---
T ss_pred             CeEECCCCCcCCCCCC--CCCC-CCCCCCCEEcC---CCEEeCCCCccCC----Ccc--cCcCC-CCCCCCCeeCCC---
Confidence            8899999999999963  4574 57888899965   4689999999998    885  34575 679888999763   


Q ss_pred             eeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecCCCCCeeeCCCCCC
Q psy13160        134 FAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       134 ~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~C~C~~g~~  186 (186)
                      + .|.|++||+|.     .|+  +++|. .+|.+++.|.+  .++|.|++||+
T Consensus       229 ~-~C~C~~G~~G~-----~C~--~~~C~-~~C~~~g~C~~--~~~C~C~~G~~  270 (324)
T 2ygq_A          229 G-KCICPPGLEGE-----QCE--ISKCP-QPCRNGGKCIG--KSKCKCSKGYQ  270 (324)
T ss_dssp             S-CBCCCTTCCTT-----TTC--------------------------------
T ss_pred             C-eeeCCCCccCC-----CCC--cCcCC-CcCCCCCEECC--CCEEECCCCCc
Confidence            5 89999999876     784  46674 67888888974  57899999985

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.29  E-value=3.6e-12  Score=80.89  Aligned_cols=92  Identities=24%  Similarity=0.367  Sum_probs=63.0

Q ss_pred             CCCCCCCCCC--------CCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCC--CCCCCCC--C
Q psy13160         12 NDSLACKPNP--------CDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPE--GDECSPN--P   78 (186)
Q Consensus        12 ~~~~~c~~~~--------C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~--~~~C~~~--~   78 (186)
                      +|+|+|..+|        |.++++|++ .++|.|.|                    ..||.|..|+..  +++|...  +
T Consensus         4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C--------------------~~G~~G~~C~~~~~~~~C~~~~~~   63 (114)
T 1aut_L            4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDC--------------------RSGWEGRFCQREVSFLNCSLDNGG   63 (114)
T ss_dssp             ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEE--------------------CTTEESTTSCEECCSSSSSSGGGG
T ss_pred             eecccccCCCccccccccCCCcCCCCCCCCCcEeeC--------------------CCCCcCCCcCcCCcCCcCcCCCCC
Confidence            5889999888        989999999 88877765                    459999999733  2467643  3


Q ss_pred             CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeee
Q psy13160         79 CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSL  129 (186)
Q Consensus        79 c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~  129 (186)
                      |..  .|+++.++|.|.|.+||.+...++.|. ++.   ..+|...+.++.
T Consensus        64 C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~-~~~---~~pC~~~~~~i~  108 (114)
T 1aut_L           64 CTH--YCLEEVGWRRCSCAPGYKLGDDLLQCH-PAV---KFPCGRPWKRME  108 (114)
T ss_dssp             CSS--EEEECSSSEEEECCTTEEECTTSSCEE-ECS---SSCTTCCC----
T ss_pred             CCC--EeECCCCCEEeECCCCeeECCCCCccC-cCc---ccCCCCCCccCC
Confidence            443  899999999999999999776555775 332   346766555543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.29  E-value=2.1e-12  Score=85.18  Aligned_cols=83  Identities=20%  Similarity=0.307  Sum_probs=63.6

Q ss_pred             CCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCCCCCCCCCCCCCC---eeee
Q psy13160         12 NDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSPNPCGPYT---GCRV   87 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~---~C~~   87 (186)
                      +|||+|.++||.+++.|++ .++|.|.|                    ..||.|..|+.++++|...++.+++   .|++
T Consensus        45 ~did~C~~~pC~n~g~C~~~~g~y~C~C--------------------~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~  104 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKDQLQSYICFC--------------------LPAFEGRNCETHKDDQLICVNENGGCEQYCSD  104 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEEETTEEEEEC--------------------CTTEESTTSCEEGGGCCSTTTGGGGCSSEEEC
T ss_pred             CccCcCcCCCcCCCCEEeCCCCCEEeeC--------------------CCCccCCccccCccccccccCCCCCccCEeEC
Confidence            5899999999999999999 99988765                    4599999997445665333333333   8999


Q ss_pred             cCC-CeEeeCCCCCcCCCCCCCCcCCCCC
Q psy13160         88 VSG-SAVCFCLPEYTGDPPSVPCTLPLNP  115 (186)
Q Consensus        88 ~~~-~~~C~c~~g~~~~~~~~~c~~~~~~  115 (186)
                      ..+ +|.|.|.+||.+..+++.|. ++++
T Consensus       105 ~~g~~y~C~C~~Gy~l~~dG~~C~-~~~e  132 (142)
T 2c4f_L          105 HTGTKRSCRCHEGYSLLADGVSCT-PTVE  132 (142)
T ss_dssp             CTTSCCEEECCTTEEECTTSSCEE-ESSS
T ss_pred             CCCCCEEEECCCCceECCCCCCCC-CCCc
Confidence            998 99999999999555555887 5543

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.28  E-value=4.5e-12  Score=83.85  Aligned_cols=85  Identities=28%  Similarity=0.659  Sum_probs=65.3

Q ss_pred             CCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCC--CCCCCCee-eeCCCCeeeeeCCC
Q psy13160         65 NMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNS--PCGPNTQC-SLLDNGFAQCTCLP  141 (186)
Q Consensus        65 ~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~--~C~~~~~C-~~~~~~~~~C~C~~  141 (186)
                      ..|. ++++|.++||.+++.|++..++|.|.|.+||.|.    .|+ ++++|...  +|.+  +| +++.++| .|.|++
T Consensus        43 ~~c~-dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~----~C~-~~deC~~~~~~C~~--~C~~n~~g~y-~C~C~~  113 (146)
T 1x7a_L           43 KQYV-DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK----NCE-LDATCNIKNGRCKQ--FCKTGADSKV-LCSCTT  113 (146)
T ss_dssp             --------CCSSCSSCTTCEEEECSSCEEEECCSSEEST----TTC-EECCTTSGGGSCSS--BCCCCSSSCC-CCBCCT
T ss_pred             ccCC-CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC----cCC-CCccccCCCCCCcC--CCCCCCCCCE-EeEcCC
Confidence            3464 8899999999999999999999999999999988    998 77999864  5654  89 9999999 999999


Q ss_pred             CCccCCCCCCCCccCCCCC
Q psy13160        142 GYVESPNTIRGCVERRQPC  160 (186)
Q Consensus       142 g~~~~~~~~~~c~~~~~~C  160 (186)
                      ||++.. .|+.|. ++++.
T Consensus       114 Gy~l~~-dG~~C~-~~~~~  130 (146)
T 1x7a_L          114 GYRLAP-DQKSCK-PAVPF  130 (146)
T ss_dssp             TEEECT-TSSSEE-ECSSS
T ss_pred             CcEeCC-CCCcCC-CCCCC
Confidence            998542 356784 55543

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.27  E-value=1.3e-12  Score=88.64  Aligned_cols=126  Identities=24%  Similarity=0.528  Sum_probs=89.8

Q ss_pred             CCCCCCCCCCCCCCCCCC-CCCCCCeeccCCCeeEecCC------CCCC--CCCCC--CC-Cc--ceeeCCCCCCCCCcc
Q psy13160          3 TAYLPPYPSNDSLACKPN-PCDPYSSCSVYSEHVAMCDP------CSGP--QAPWL--PH-CR--PECLCNSDCPFNMAF   68 (186)
Q Consensus         3 ~~~~~~~~~~~~~~c~~~-~C~~~~~C~~~~~~~C~C~~------c~~~--~~~C~--~~-C~--~~C~C~~g~~~~~c~   68 (186)
                      .+|+|..|+.   +|.+. .|..++.|..  .+.|+|.+      |+..  ...|.  .. |.  +.|.|.+||.|..|+
T Consensus        23 ~g~~G~~C~~---~C~~~~~c~~~g~C~~--~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~   97 (169)
T 2vj2_A           23 DYYYGFGCNK---FCRPRDDFFGHYACDQ--NGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD   97 (169)
T ss_dssp             TTEETTTTCE---ECCCEEETTEEEEECS--SCCEEECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSC
T ss_pred             CcCcCCCccc---ccCCCCCcCCCCEeCC--CCeeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCcc
Confidence            3567777642   35432 3656667743  34678877      5421  12232  22 55  899999999999995


Q ss_pred             CCCCCCCCCC-CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC-CCCCCCCeeeeC-CCCeeeeeCCCCCcc
Q psy13160         69 PEGDECSPNP-CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN-SPCGPNTQCSLL-DNGFAQCTCLPGYVE  145 (186)
Q Consensus        69 ~~~~~C~~~~-c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~-~~~~~~C~C~~g~~~  145 (186)
                          +|...+ |.++ +|+   +++.|.|.+||.+.    .|+.++++|.. .+|.++++|+++ .++| +|.|++||+|
T Consensus        98 ----~C~~~~~C~~g-~C~---~~~~C~C~~G~~G~----~C~~~~~~C~~~~~C~~~g~C~~~~~~~~-~C~C~~G~~G  164 (169)
T 2vj2_A           98 ----KCIPHPGCVHG-ICN---EPWQCLCETNWGGQ----LCDKDLNYCGTHQPCLNGGTCSNTGPDKY-QCSCPEGYSG  164 (169)
T ss_dssp             ----EECCCTTCSSE-ECS---STTCCEECTTEETT----TTCEESCHHHHTCCCCTTCEEEECSTTCE-EEECCTTCCS
T ss_pred             ----cCCCCCCCCCC-CcC---CCCEEeCCCCCCCC----cccCCCCCCCCCCCCCCCCEEcCCCCCCc-EeECCCCCcC
Confidence                255554 6654 786   56899999999998    89756888874 789999999996 7889 9999999987


Q ss_pred             C
Q psy13160        146 S  146 (186)
Q Consensus       146 ~  146 (186)
                      .
T Consensus       165 ~  165 (169)
T 2vj2_A          165 P  165 (169)
T ss_dssp             T
T ss_pred             c
Confidence            5

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.26  E-value=2.6e-12  Score=77.55  Aligned_cols=68  Identities=24%  Similarity=0.482  Sum_probs=55.1

Q ss_pred             CCCCCCCCCC--CCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCC----CCCccCCCCCCCCCCCCCCCe
Q psy13160         12 NDSLACKPNP--CDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCP----FNMAFPEGDECSPNPCGPYTG   84 (186)
Q Consensus        12 ~~~~~c~~~~--C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~----~~~c~~~~~~C~~~~c~~~~~   84 (186)
                      +|||+|..++  | .++.|++ .++|.|.|                    .+||.    +..|+ ++++|...+|.  +.
T Consensus         1 ~dideC~~~~~~C-~~~~C~n~~g~y~C~C--------------------~~G~~~~~~g~~C~-dideC~~~~C~--~~   56 (87)
T 1z6c_A            1 KDVDECSLKPSIC-GTAVCKNIPGDFECEC--------------------PEGYRYNLKSKSCE-DIDECSENMCA--QL   56 (87)
T ss_dssp             CCSCSSSSSSSSB-TTSSCCCBTTBCCCSS--------------------STTCEEETTTTEEE-CCCHHHHSCCS--SE
T ss_pred             CccccccCCCCCC-CCCEeECCCCCEEEEC--------------------CCCceECCCCCcCC-CcCeeCCCCCC--CE
Confidence            3789998777  8 7899999 99877765                    45898    78896 89999888886  69


Q ss_pred             eeecCCCeEeeCC--CCCcCC
Q psy13160         85 CRVVSGSAVCFCL--PEYTGD  103 (186)
Q Consensus        85 C~~~~~~~~C~c~--~g~~~~  103 (186)
                      |+++.++|.|.|+  .||...
T Consensus        57 C~n~~g~y~C~C~g~~G~~~~   77 (87)
T 1z6c_A           57 CVNYPGGYTCYCDGKKGFKLA   77 (87)
T ss_dssp             ECCCSSSCCEECCSSSCCBCC
T ss_pred             EEccCCCEEEECCCCcCCccc
Confidence            9999999999995  555443

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.25  E-value=1.8e-11  Score=98.94  Aligned_cols=112  Identities=26%  Similarity=0.567  Sum_probs=89.4

Q ss_pred             ceeeCCCCCCCCCccCCC--------CCCCC----CCCCCCCeeeecCCCeEeeCC----CCCcCCCCCCCCcCCCCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEG--------DECSP----NPCGPYTGCRVVSGSAVCFCL----PEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~--------~~C~~----~~c~~~~~C~~~~~~~~C~c~----~g~~~~~~~~~c~~~~~~C~  117 (186)
                      ..|.|.+||.|..|+..+        ++|..    .+|.+++.|+.    +.|.|.    +||.|.    .|+.++++|.
T Consensus       458 G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~----~Ce~~~~~C~  529 (690)
T 3fcs_B          458 GVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGKITGK----YCECDDFSCV  529 (690)
T ss_dssp             TEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCBST----TSCBCSSCCC
T ss_pred             CceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCeeCC----CcCcccCcCc
Confidence            349999999999997554        66864    34888889973    589999    999999    8975677887


Q ss_pred             C---CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCc--cCCCCCCC---CCCCCCCeecCCCCCeeeC-CCCCC
Q psy13160        118 N---SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCV--ERRQPCEP---NVCGAGAVCDPNRAPYCFC-PEGTM  186 (186)
Q Consensus       118 ~---~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~--~~~~~C~~---~~C~~~~~C~~~~~~~C~C-~~g~~  186 (186)
                      .   .+|..++.|.+    + .|.|.+||+|.     .|+  .+++.|..   .+|.+++.|.+   .+|.| .+||+
T Consensus       530 ~~~~~~C~~~G~C~~----g-~C~C~~Gy~G~-----~CeC~~~~~~C~~~~g~~C~~~G~C~~---g~C~C~~~Gy~  594 (690)
T 3fcs_B          530 RYKGEMCSGHGQCSC----G-DCLCDSDWTGY-----YCNCTTRTDTCMSSNGLLCSGRGKCEC---GSCVCIQPGSY  594 (690)
T ss_dssp             BSSSSBGGGSEEEET----T-EEEECTTEESS-----SSCEECCCTTTBCTTSSBTSSSCEEET---TEEECCSTTCB
T ss_pred             CCCCCCCCCCCEecC----C-eeECcCCCcCC-----CCccCCCCCcccCCCCCCCCCCCEEeC---CEEECCCCCcc
Confidence            4   37888899976    4 89999999986     675  46788875   56988999975   38999 89984

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.25  E-value=5.2e-12  Score=83.53  Aligned_cols=69  Identities=22%  Similarity=0.541  Sum_probs=55.2

Q ss_pred             CCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCC--CCCCCCCee-cCC-CCCeeeCCC
Q psy13160        108 PCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEP--NVCGAGAVC-DPN-RAPYCFCPE  183 (186)
Q Consensus       108 ~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~--~~C~~~~~C-~~~-~~~~C~C~~  183 (186)
                      .|. ++++|.+++|.++++|+++.++| .|.|++||+|.     .|+ ++++|..  .+|.+  .| +++ ++|+|.|++
T Consensus        44 ~c~-dideC~~~pC~n~g~C~~~~~~y-~C~C~~G~~G~-----~C~-~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~  113 (146)
T 1x7a_L           44 QYV-DGDQCEPNPCLNGGLCKDDINSY-ECWCQVGFEGK-----NCE-LDATCNIKNGRCKQ--FCKTGADSKVLCSCTT  113 (146)
T ss_dssp             -------CCSSCSSCTTCEEEECSSCE-EEECCSSEEST-----TTC-EECCTTSGGGSCSS--BCCCCSSSCCCCBCCT
T ss_pred             cCC-CcCcCCCCCCCCCCEeECCCCCE-EEecCCCCcCC-----cCC-CCccccCCCCCCcC--CCCCCCCCCEEeEcCC
Confidence            565 89999999999999999999999 99999999865     895 7799985  35754  89 888 899999999


Q ss_pred             CCC
Q psy13160        184 GTM  186 (186)
Q Consensus       184 g~~  186 (186)
                      ||+
T Consensus       114 Gy~  116 (146)
T 1x7a_L          114 GYR  116 (146)
T ss_dssp             TEE
T ss_pred             CcE
Confidence            984

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.23  E-value=1.4e-11  Score=81.21  Aligned_cols=83  Identities=25%  Similarity=0.536  Sum_probs=65.1

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCC---eeeeCCC-CeeeeeCCCCCcc
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNT---QCSLLDN-GFAQCTCLPGYVE  145 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~---~C~~~~~-~~~~C~C~~g~~~  145 (186)
                      ++++|.++||.+++.|++..++|.|.|.+||.|.    .|+.+++++...++.+++   +|+++.+ +| .|.|++||++
T Consensus        46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~----~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y-~C~C~~Gy~l  120 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR----NCETHKDDQLICVNENGGCEQYCSDHTGTKR-SCRCHEGYSL  120 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST----TSCEEGGGCCSTTTGGGGCSSEEECCTTSCC-EEECCTTEEE
T ss_pred             ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC----ccccCccccccccCCCCCccCEeECCCCCCE-EEECCCCceE
Confidence            7889998999999999999999999999999988    897335665333333333   8999999 99 9999999985


Q ss_pred             CCCCCCCCccCCCC
Q psy13160        146 SPNTIRGCVERRQP  159 (186)
Q Consensus       146 ~~~~~~~c~~~~~~  159 (186)
                      .. +|+.|. ++++
T Consensus       121 ~~-dG~~C~-~~~e  132 (142)
T 2c4f_L          121 LA-DGVSCT-PTVE  132 (142)
T ss_dssp             CT-TSSCEE-ESSS
T ss_pred             CC-CCCCCC-CCCc
Confidence            42 356785 5554

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.22  E-value=2.8e-12  Score=88.33  Aligned_cols=77  Identities=23%  Similarity=0.419  Sum_probs=29.3

Q ss_pred             CCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCC-CCCCCC--CCCCCCeeee
Q psy13160         12 NDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEG-DECSPN--PCGPYTGCRV   87 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~-~~C~~~--~c~~~~~C~~   87 (186)
                      +|||+|.++||.+++.|++ .++|.|.|                    .+||.|..|+..+ ++|...  +|.+  .|++
T Consensus        40 ~dideC~~~pC~ngg~C~n~~g~y~C~C--------------------~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n   97 (195)
T 1nfu_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTC--------------------LEGFEGKNCELFTRKLCSLDNGDCDQ--FCHE   97 (195)
T ss_dssp             -------------------------------------------------------------CCGGGTGGGGCSS--EEEE
T ss_pred             CCCcccCCCCCCCCCEeECCCCCeeEeC--------------------CCCceeccccccccccccCCCCCCCC--EeEC
Confidence            5899999999999999999 88887765                    4599999998556 789763  5654  9999


Q ss_pred             cCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         88 VSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        88 ~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ..++|.|.|.+||.+...+..|.
T Consensus        98 ~~gsy~C~C~~Gy~l~~dG~~C~  120 (195)
T 1nfu_B           98 EQNSVVCSCARGYTLADNGKACI  120 (195)
T ss_dssp             ETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCeEEECCCCceeCCCCCccc
Confidence            99999999999999554444887

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.22  E-value=2.8e-11  Score=90.18  Aligned_cols=83  Identities=22%  Similarity=0.429  Sum_probs=67.8

Q ss_pred             CCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCCCCCCC---CCCCCCCeeee
Q psy13160         12 NDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEGDECSP---NPCGPYTGCRV   87 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~~~C~~---~~c~~~~~C~~   87 (186)
                      .|+|+|.++||.+++.|.+ .++|.|.                    |.+||.|..|+.++++|..   .+|.+  .|++
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~--------------------C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~   60 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDSIWGYTCT--------------------CSPGYEGSNCELAKNECHPERTDGCQH--FCLP   60 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCCSSSCCCC--------------------CSSSCCSSSSCCCSSSCCTTCTTSCSS--EEEC
T ss_pred             ccCCcCCCCCCCCCCEeECCCCCeEEE--------------------CCCCCcCCccccCcccCCCCCCCCCcC--cccc
Confidence            4789999999999999999 8887765                    4569999999878999986   67876  9999


Q ss_pred             cCCCeEeeCCCCCcCCCCCCCCcCCCCCCC
Q psy13160         88 VSGSAVCFCLPEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        88 ~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~  117 (186)
                      ..++|.|.|.+||.+......|. ++++|.
T Consensus        61 ~~g~~~C~C~~g~~~~~~~~~C~-~~~~c~   89 (317)
T 3h5c_B           61 GQESYTCSCAQGYRLGEDHKQCV-PHDQCA   89 (317)
T ss_dssp             CSSSCEEECCTTEECCTTSSCCE-ECSSCC
T ss_pred             CCCeeEEeccccccccccccccc-cccccc
Confidence            99999999999999876666776 666553

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.18  E-value=2.4e-11  Score=77.08  Aligned_cols=92  Identities=25%  Similarity=0.449  Sum_probs=64.8

Q ss_pred             CCCCCCCCC--------CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCC--CCCCCCC--CCCCCCeeeeCCCCeeee
Q psy13160         70 EGDECSPNP--------CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLP--LNPCHNS--PCGPNTQCSLLDNGFAQC  137 (186)
Q Consensus        70 ~~~~C~~~~--------c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~--~~~C~~~--~C~~~~~C~~~~~~~~~C  137 (186)
                      ++++|..+|        |.++++|++..++|.|.|.+||.|.    .|+..  +++|...  .|..  +|+++.++| +|
T Consensus         5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~----~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y-~C   77 (114)
T 1aut_L            5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR----FCQREVSFLNCSLDNGGCTH--YCLEEVGWR-RC   77 (114)
T ss_dssp             ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEEST----TSCEECCSSSSSSGGGGCSS--EEEECSSSE-EE
T ss_pred             ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCC----CcCcCCcCCcCcCCCCCCCC--EeECCCCCE-Ee
Confidence            567777777        8888999999999999999999998    88732  2467643  3543  899999999 99


Q ss_pred             eCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecC
Q psy13160        138 TCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDP  173 (186)
Q Consensus       138 ~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~  173 (186)
                      .|++||++.. .++.|. +++   ..+|...+.++.
T Consensus        78 ~C~~G~~~~~-~g~~C~-~~~---~~pC~~~~~~i~  108 (114)
T 1aut_L           78 SCAPGYKLGD-DLLQCH-PAV---KFPCGRPWKRME  108 (114)
T ss_dssp             ECCTTEEECT-TSSCEE-ECS---SSCTTCCC----
T ss_pred             ECCCCeeECC-CCCccC-cCc---ccCCCCCCccCC
Confidence            9999999653 345674 332   346777776654

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.16  E-value=7.6e-12  Score=78.30  Aligned_cols=77  Identities=25%  Similarity=0.561  Sum_probs=36.4

Q ss_pred             CCCCCcCCCCCCCCcCCCCCCCCC--CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCC-CCCCCCCeec
Q psy13160         96 CLPEYTGDPPSVPCTLPLNPCHNS--PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEP-NVCGAGAVCD  172 (186)
Q Consensus        96 c~~g~~~~~~~~~c~~~~~~C~~~--~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~-~~C~~~~~C~  172 (186)
                      ...+|.+.    .|  ++++|...  .|.  ..|+++.++| .|.|++||.+.  .+..|+ +|++|.. ++|.  +.|+
T Consensus        18 ~~~~~~~~----~C--d~neC~~~~~~C~--~~C~n~~g~y-~C~C~~Gy~g~--~g~~C~-dideC~~~~~C~--~~C~   83 (107)
T 2w2n_E           18 TENLYFQG----AM--GTNECLDNNGGCS--YVCNDLKIGY-ECLCPDGFQLV--AQRRCE-DIDECQDPDTCS--QLCV   83 (107)
T ss_dssp             --CCCCSC----CB--SCCGGGTGGGGCS--SEEECCSBSC-EEECCTTCEEE--TTTEEE-C-----------------
T ss_pred             cCCCcCCC----CC--cCccCcCCCCCCC--CEeEeCCCCe-EEECCCCcccc--CCCccc-cccccCCCCCcC--Ceee
Confidence            34566666    77  68888753  464  5899999999 99999999984  246896 9999974 7785  6999


Q ss_pred             CC-CCCeeeCCCCCC
Q psy13160        173 PN-RAPYCFCPEGTM  186 (186)
Q Consensus       173 ~~-~~~~C~C~~g~~  186 (186)
                      |+ ++|+|.|++||+
T Consensus        84 n~~gsy~C~C~~Gy~   98 (107)
T 2w2n_E           84 NLEGGYKCQCEEGFQ   98 (107)
T ss_dssp             ---------------
T ss_pred             cCCCCEEEECCCCce
Confidence            98 899999999985

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.15  E-value=6.2e-12  Score=82.05  Aligned_cols=77  Identities=23%  Similarity=0.419  Sum_probs=28.9

Q ss_pred             CCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCC-CCCCCC--CCCCCCeeee
Q psy13160         12 NDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEG-DECSPN--PCGPYTGCRV   87 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~-~~C~~~--~c~~~~~C~~   87 (186)
                      +|+|+|.++||.+++.|++ .++|.|.|                    +.||.|..|+..+ ++|...  +|.+  .|++
T Consensus        40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C--------------------~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~   97 (134)
T 2vh0_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTC--------------------LEGFEGKNCELFTRKLCSLDNGDCDQ--FCHE   97 (134)
T ss_dssp             -------------------------------------------------------------CCGGGTGGGGCSS--EEEE
T ss_pred             CCcCcCCCCCCCCcCCcccCCCCEEeeC--------------------CCCccCCccccCCCCccccCCCCCCC--EeEC
Confidence            5899999999999999999 88877754                    5599999997546 788753  4654  9999


Q ss_pred             cCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         88 VSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        88 ~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ..++|.|.|.+||.+.+++..|.
T Consensus        98 ~~g~y~C~C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B           98 EQNSVVCSCARGYTLADNGKACI  120 (134)
T ss_dssp             ETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCEEEECCCCcEECCCCCccC
Confidence            99999999999999554444786

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.14  E-value=3.4e-11  Score=97.17  Aligned_cols=112  Identities=23%  Similarity=0.560  Sum_probs=85.0

Q ss_pred             ceeeCCCCCCCCCccCCCC---------CCCCC----CCCCCCeeeecCCCeEeeCC------CCCcCCCCCCCCcCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEGD---------ECSPN----PCGPYTGCRVVSGSAVCFCL------PEYTGDPPSVPCTLPLN  114 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~---------~C~~~----~c~~~~~C~~~~~~~~C~c~------~g~~~~~~~~~c~~~~~  114 (186)
                      ..|.|.+||.|..|+...+         .|...    +|.+++.|+.  +  .|.|.      +||.|.    .|+.++.
T Consensus       446 g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~----~Ce~~~~  517 (687)
T 3k6s_B          446 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKLIYGQ----YCECDTI  517 (687)
T ss_dssp             SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCCEEST----TSCEESS
T ss_pred             CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCCcccc----ccccccc
Confidence            6789999999999973333         46532    4888889973  2  89999      999999    8965567


Q ss_pred             CCCC---CCCCC--CCeeeeCCCCeeeeeCCCCCccCCCCCCCCc--cCCCCCCCC---CCCCCCeecCCCCCeeeCCCC
Q psy13160        115 PCHN---SPCGP--NTQCSLLDNGFAQCTCLPGYVESPNTIRGCV--ERRQPCEPN---VCGAGAVCDPNRAPYCFCPEG  184 (186)
Q Consensus       115 ~C~~---~~C~~--~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~--~~~~~C~~~---~C~~~~~C~~~~~~~C~C~~g  184 (186)
                      .|..   .+|..  ++.|...     .|.|.+||+|.     .|+  .+++.|...   +|.+++.|..   .+|.|.+|
T Consensus       518 ~C~~~~~~~C~~~~~G~C~~g-----~C~C~~G~~G~-----~Cec~~~~~~C~~~~g~~Cs~~G~C~~---g~C~C~~G  584 (687)
T 3k6s_B          518 NCERYNGQVCGGPGRGLCFCG-----KCRCHPGFEGS-----ACQCERTTEGCLNPRRVECSGRGRCRC---NVCECHSG  584 (687)
T ss_dssp             CSCEETTEETSHHHHEEEETT-----EEEECTTCCST-----TSCSCCSSCTTBCTTCSBTSSSCCBCS---SCBCCSTT
T ss_pred             cccCCCCcCcCCCCCCeEECC-----EEEcCCCCcCC-----CCccCCCCCCCCCCCCCCCCCCCcCCC---CEEECCCC
Confidence            7863   35877  7889752     89999999986     664  335788753   6888888875   46999999


Q ss_pred             CC
Q psy13160        185 TM  186 (186)
Q Consensus       185 ~~  186 (186)
                      |+
T Consensus       585 y~  586 (687)
T 3k6s_B          585 YQ  586 (687)
T ss_dssp             CC
T ss_pred             Cc
Confidence            85

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.13  E-value=1.1e-10  Score=86.92  Aligned_cols=83  Identities=29%  Similarity=0.711  Sum_probs=69.1

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC---CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN---SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~---~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ++++|.++||.+++.|++..+.|.|.|.+||.|.    .|+.++++|..   ++|.+  .|+++.++| .|.|++||.+.
T Consensus         4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~----~C~~~~~eC~~~~~~~C~~--~C~~~~g~~-~C~C~~g~~~~   76 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGS----NCELAKNECHPERTDGCQH--FCLPGQESY-TCSCAQGYRLG   76 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSS----SSCCCSSSCCTTCTTSCSS--EEECCSSSC-EEECCTTEECC
T ss_pred             cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCC----ccccCcccCCCCCCCCCcC--ccccCCCee-EEecccccccc
Confidence            5788989999999999998899999999999998    99778999986   68876  899999999 99999999875


Q ss_pred             CCCCCCCccCCCCCC
Q psy13160        147 PNTIRGCVERRQPCE  161 (186)
Q Consensus       147 ~~~~~~c~~~~~~C~  161 (186)
                      . .++.|. ++++|.
T Consensus        77 ~-~~~~C~-~~~~c~   89 (317)
T 3h5c_B           77 E-DHKQCV-PHDQCA   89 (317)
T ss_dssp             T-TSSCCE-ECSSCC
T ss_pred             c-cccccc-cccccc
Confidence            3 245673 666663

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.10  E-value=2.3e-11  Score=76.11  Aligned_cols=80  Identities=20%  Similarity=0.528  Sum_probs=36.5

Q ss_pred             CCCCCCCCCccCCCCCCCCC--CCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC-CCCCCCCeeeeCCCCe
Q psy13160         58 CNSDCPFNMAFPEGDECSPN--PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN-SPCGPNTQCSLLDNGF  134 (186)
Q Consensus        58 C~~g~~~~~c~~~~~~C~~~--~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~~~~~  134 (186)
                      ...+|.+..|  ++++|...  +|.  +.|+++.++|.|.|.+||.+. .+..|+ ++++|.. .+|.  +.|+++.++|
T Consensus        18 ~~~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~-~g~~C~-dideC~~~~~C~--~~C~n~~gsy   89 (107)
T 2w2n_E           18 TENLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLV-AQRRCE-DIDECQDPDTCS--QLCVNLEGGY   89 (107)
T ss_dssp             --CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEE-TTTEEE-C-----------------------
T ss_pred             cCCCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCcccc-CCCccc-cccccCCCCCcC--CeeecCCCCE
Confidence            3457888888  57889753  454  589999999999999999873 112888 8999984 6786  6899999999


Q ss_pred             eeeeCCCCCccC
Q psy13160        135 AQCTCLPGYVES  146 (186)
Q Consensus       135 ~~C~C~~g~~~~  146 (186)
                       .|.|++||.+.
T Consensus        90 -~C~C~~Gy~~~  100 (107)
T 2w2n_E           90 -KCQCEEGFQLD  100 (107)
T ss_dssp             ------------
T ss_pred             -EEECCCCceEC
Confidence             99999999875

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.08  E-value=2.4e-11  Score=83.70  Aligned_cols=80  Identities=28%  Similarity=0.681  Sum_probs=28.7

Q ss_pred             CccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCC-CCCCCC--CCCCCCeeeeCCCCeeeeeCCCC
Q psy13160         66 MAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPL-NPCHNS--PCGPNTQCSLLDNGFAQCTCLPG  142 (186)
Q Consensus        66 ~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~-~~C~~~--~C~~~~~C~~~~~~~~~C~C~~g  142 (186)
                      .|. ++++|.++||.+++.|++..++|.|.|.+||.|.    .|..++ ++|...  +|.+  .|+++.++| .|.|++|
T Consensus        38 ~c~-dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~----~Ce~~i~deC~~~~~~C~~--~C~n~~gsy-~C~C~~G  109 (195)
T 1nfu_B           38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK----NCELFTRKLCSLDNGDCDQ--FCHEEQNSV-VCSCARG  109 (195)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEE-EEECCTT
T ss_pred             cCC-CCcccCCCCCCCCCEeECCCCCeeEeCCCCceec----cccccccccccCCCCCCCC--EeECCCCCe-EEECCCC
Confidence            464 8899999999999999999999999999999988    897446 789763  5664  899999999 9999999


Q ss_pred             CccCCCCCCCCc
Q psy13160        143 YVESPNTIRGCV  154 (186)
Q Consensus       143 ~~~~~~~~~~c~  154 (186)
                      |++.. .|..|.
T Consensus       110 y~l~~-dG~~C~  120 (195)
T 1nfu_B          110 YTLAD-NGKACI  120 (195)
T ss_dssp             EEECT-TSSCEE
T ss_pred             ceeCC-CCCccc
Confidence            98432 356785

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.04  E-value=3.4e-11  Score=78.55  Aligned_cols=83  Identities=27%  Similarity=0.648  Sum_probs=29.5

Q ss_pred             CccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCC-CCCCCC--CCCCCCeeeeCCCCeeeeeCCCC
Q psy13160         66 MAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPL-NPCHNS--PCGPNTQCSLLDNGFAQCTCLPG  142 (186)
Q Consensus        66 ~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~-~~C~~~--~C~~~~~C~~~~~~~~~C~C~~g  142 (186)
                      .|. ++++|.++||.+++.|++..++|.|.|.+||.|.    .|...+ ++|...  +|.+  +|+++.++| .|.|++|
T Consensus        38 ~c~-d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~----~C~~~i~d~C~~~~~~C~~--~C~~~~g~y-~C~C~~G  109 (134)
T 2vh0_B           38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK----NCELFTRKLCSLDNGDCDQ--FCHEEQNSV-VCSCARG  109 (134)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEE-EEECCTT
T ss_pred             cCC-CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC----ccccCCCCccccCCCCCCC--EeECCCCCE-EEECCCC
Confidence            454 7899998999999999999999999999999988    897446 778753  4654  899999999 9999999


Q ss_pred             CccCCCCCCCCccCCC
Q psy13160        143 YVESPNTIRGCVERRQ  158 (186)
Q Consensus       143 ~~~~~~~~~~c~~~~~  158 (186)
                      |++.. .|+.|. +++
T Consensus       110 y~l~~-~g~~C~-~~~  123 (134)
T 2vh0_B          110 YTLAD-NGKACI-PTG  123 (134)
T ss_dssp             EEECT-TSSCEE-ESS
T ss_pred             cEECC-CCCccC-cCC
Confidence            98542 355774 443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.99  E-value=4.4e-10  Score=92.86  Aligned_cols=117  Identities=21%  Similarity=0.449  Sum_probs=65.4

Q ss_pred             CCCCCCCCCccCCCCCCC---CCCCCCCCeeeecCC--CeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCC
Q psy13160         58 CNSDCPFNMAFPEGDECS---PNPCGPYTGCRVVSG--SAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDN  132 (186)
Q Consensus        58 C~~g~~~~~c~~~~~~C~---~~~c~~~~~C~~~~~--~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~  132 (186)
                      |..|.-+..|. .+++|.   ..+|.+ +.|+....  ...+.|..++-....  .|  .+++|..+...-...|.++.+
T Consensus       258 C~dgsDE~~C~-~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~--~C--~~~~C~~~~~~C~~~C~~~~~  331 (791)
T 3m0c_C          258 CKDMSDEVGCV-NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIK--EC--GTNECLDNNGGCSHVCNDLKI  331 (791)
T ss_dssp             ----------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCT--TB--SCCSTTTGGGGCSSEEEECSB
T ss_pred             cccccccCccc-ccccccCCCccccCC-CcccccccccCCccccccccCcccc--cc--ccccccccccCccccccCCCC
Confidence            55555455554 334442   124543 45654322  123456555433211  34  456665432112248999999


Q ss_pred             CeeeeeCCCCCccCCCCCCCCccCCCCCC-CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        133 GFAQCTCLPGYVESPNTIRGCVERRQPCE-PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       133 ~~~~C~C~~g~~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +| .|.|++||.+.  .++.|+ ++++|. +..|.  +.|+|+ ++|+|.|++||+
T Consensus       332 ~y-~C~C~~Gy~l~--~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~  381 (791)
T 3m0c_C          332 GY-ECLCPDGFQLV--AQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ  381 (791)
T ss_dssp             SE-EEECCTTCEEE--TTTEEE-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEE
T ss_pred             Cc-ccCCCCCCccC--CCCccc-cCcccCCCCCCC--CeeecCCCCceeecCCCCE
Confidence            99 99999999862  366895 999997 35674  489998 899999999984

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.93  E-value=5.6e-10  Score=90.21  Aligned_cols=98  Identities=29%  Similarity=0.659  Sum_probs=72.3

Q ss_pred             eeeCC------CCCCCCCccCCCCCCCC---CCCCC--CCeeeecCCCeEeeCCCCCcCCCCCCCCc--CCCCCCCCC--
Q psy13160         55 ECLCN------SDCPFNMAFPEGDECSP---NPCGP--YTGCRVVSGSAVCFCLPEYTGDPPSVPCT--LPLNPCHNS--  119 (186)
Q Consensus        55 ~C~C~------~g~~~~~c~~~~~~C~~---~~c~~--~~~C~~~~~~~~C~c~~g~~~~~~~~~c~--~~~~~C~~~--  119 (186)
                      .|.|.      .||.|..|+.+...|..   .+|..  ++.|..  +  .|.|.+||.|.    .|+  ..++.|...  
T Consensus       494 ~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~G~----~Cec~~~~~~C~~~~g  565 (687)
T 3k6s_B          494 QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFEGS----ACQCERTTEGCLNPRR  565 (687)
T ss_dssp             EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET--T--EEEECTTCCST----TSCSCCSSCTTBCTTC
T ss_pred             EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCcCC----CCccCCCCCCCCCCCC
Confidence            45666      79999999756677863   35776  788873  2  79999999999    886  225677653  


Q ss_pred             -CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeec
Q psy13160        120 -PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCD  172 (186)
Q Consensus       120 -~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~  172 (186)
                       +|..++.|..    . .|.|.+||.|.     .|+. -..| +.+|.+++.|+
T Consensus       566 ~~Cs~~G~C~~----g-~C~C~~Gy~G~-----~Ce~-c~~C-~~~C~~~g~Cv  607 (687)
T 3k6s_B          566 VECSGRGRCRC----N-VCECHSGYQLP-----LCQE-CPGC-PSPCGKYISCA  607 (687)
T ss_dssp             SBTSSSCCBCS----S-CBCCSTTCCTT-----TTCC-CTTS-CCCCTTTHHHH
T ss_pred             CCCCCCCcCCC----C-EEECCCCCcCC-----CCCC-CCCC-CcccCCCCCCC
Confidence             7888899976    3 89999999876     7752 2356 45787777775

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.92  E-value=1.6e-09  Score=83.50  Aligned_cols=112  Identities=22%  Similarity=0.561  Sum_probs=78.4

Q ss_pred             ceeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCC----------CCCC-CCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPL----------NPCH-NSPCG  122 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~----------~~C~-~~~C~  122 (186)
                      +.|.|..||.|..|+.   .|  .+|.+++.|.+  ..+.|.|.+||.|.    .|+...          ++|. .++|.
T Consensus       185 ~~c~C~~g~~G~~C~~---~C--~~C~~~G~C~~--~~g~C~C~~G~~G~----~Ce~~C~~g~~g~~C~~~C~~~~~C~  253 (423)
T 2gy5_A          185 IVRRCEAQKWGPECNH---LC--TACMNNGVCHE--DTGECICPPGFMGR----TCEKACELHTFGRTCKERCSGQEGCK  253 (423)
T ss_dssp             EECSSCTTEESTTSCE---EC--CCCCTTCEECT--TTCCEECCTTEEST----TSCEECCTTEESTTSCEECCSTTTTT
T ss_pred             cCCcCCCCCCCCCCCC---CC--CCCCCCCEEEC--CCCcEeCCCCccCC----CcccccCCCCCCCCcCccCCCCCCCC
Confidence            4578999999998862   24  47888899975  46789999999998    886221          2343 34577


Q ss_pred             CCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccC------CCCCCC-CCCCCCCeecCCCCCeeeCCCCCC
Q psy13160        123 PNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVER------RQPCEP-NVCGAGAVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       123 ~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~------~~~C~~-~~C~~~~~C~~~~~~~C~C~~g~~  186 (186)
                      +++.|.  .+++ .|.|++||.|.     .|+..      -+.|.. -+|.+++.|.+..  .|.|++||+
T Consensus       254 ~~g~C~--~~~~-~C~C~~G~~G~-----~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~--~C~C~~G~~  314 (423)
T 2gy5_A          254 SYVFCL--PDPY-GCSCATGWKGL-----QCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ--GCLCSPGWQ  314 (423)
T ss_dssp             TCCEEE--TTTT-EEECCBTCBSG-----GGCBCCCTTBCSBTTCCBCCCTTCCEEETTT--EEECCTTCB
T ss_pred             CCCEEC--CCCC-eEEeCCCcccc-----cccCccCCCCcCCcccccccCCCCCEecCCC--ceECCCCCc
Confidence            777784  4567 99999999876     56310      012221 1577888998653  499999984

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.85  E-value=2.9e-09  Score=81.71  Aligned_cols=67  Identities=28%  Similarity=0.679  Sum_probs=55.4

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCC-CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        114 NPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCE-PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +||...++...+.|.++.++| .|.|++||.+.  .++.|+ ++++|. +.+|.+  .|+|+ ++|+|.|.+||+
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y-~C~C~~G~~~~--~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~   69 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGY-ECLCPDGFQLV--AQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQ   69 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSE-EEECCTTEEEC--SSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCC
T ss_pred             CcccCCCCCCCCEeECCCCCe-EEECCCCCCcC--CCCccc-CchhhhccCCCCC--ccCCCccceeeecccccc
Confidence            467666665567999999999 99999999863  467895 999997 467864  89998 899999999985

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.83  E-value=1.5e-10  Score=77.99  Aligned_cols=73  Identities=29%  Similarity=0.588  Sum_probs=53.8

Q ss_pred             CCCCCC-CCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCC--CCCC--CC--CCCCeeeeCCC----Ceeeee
Q psy13160         70 EGDECS-PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNP--CHNS--PC--GPNTQCSLLDN----GFAQCT  138 (186)
Q Consensus        70 ~~~~C~-~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~--C~~~--~C--~~~~~C~~~~~----~~~~C~  138 (186)
                      ++|+|. .++|. .+.|+++.++|.|.|.+||.+.+.++.|+ ++++  |...  +|  ..++.|+++.+    +| .|.
T Consensus         2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~-~C~   78 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKA-SCC   78 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHH-HHH
T ss_pred             ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCc-eee
Confidence            678887 47886 68999999999999999999665555887 7776  7642  33  24678888876    78 999


Q ss_pred             CCCCCcc
Q psy13160        139 CLPGYVE  145 (186)
Q Consensus       139 C~~g~~~  145 (186)
                      |++||.+
T Consensus        79 C~~G~~~   85 (162)
T 1uzk_A           79 CSLGKAW   85 (162)
T ss_dssp             TTTCCEE
T ss_pred             CCCCCCc
Confidence            9999974

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.79  E-value=4.2e-08  Score=80.35  Aligned_cols=67  Identities=28%  Similarity=0.708  Sum_probs=54.1

Q ss_pred             CCCCCCCC--CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCC-CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        112 PLNPCHNS--PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCE-PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       112 ~~~~C~~~--~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ++++|..+  .|.  ..|.++.++| .|.|++||.+.  .++.|+ ++++|. ..+|.  +.|+|+ ++|+|.|++||+
T Consensus       293 ~~~eC~~~~~~C~--~~C~~~~~~~-~C~C~~G~~~~--~~~~C~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~  363 (699)
T 1n7d_A          293 GTNECLDNNGGCS--HVCNDLKIGY-ECLCPDGFQLV--AQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ  363 (699)
T ss_dssp             CCCCTTSSTTTSC--TTCCCCTTCC-CCCCCSSSCCC--SSSCCC-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCB
T ss_pred             ccccccccccCcC--CCcccCCCCc-EEeCCCCeEcC--CCCccc-CccccCCCCccc--cccccCCCCeeeeeecccc
Confidence            56777643  353  5799999999 99999999863  467895 999997 46785  489998 899999999984

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.77  E-value=3.8e-09  Score=57.31  Aligned_cols=45  Identities=9%  Similarity=-0.034  Sum_probs=34.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCeec-----c-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCccCCC
Q psy13160          7 PPYPSNDSLACKPNPCDPYSSCS-----V-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAFPEG   71 (186)
Q Consensus         7 ~~~~~~~~~~c~~~~C~~~~~C~-----~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~~~~   71 (186)
                      |+.|.++||+|.++||.++|+|.     + .++|.|.                    |++||+|..|+..+
T Consensus         1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~--------------------C~~g~~G~~CE~~v   51 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCK--------------------CPNEFTGDRCQNYV   51 (55)
T ss_dssp             --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEE--------------------ECTTEESTTSCEEC
T ss_pred             CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEe--------------------CCCCCcCCCcCccC
Confidence            56788999999999999999994     5 5666665                    45599999997544

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.72  E-value=3e-08  Score=82.02  Aligned_cols=71  Identities=20%  Similarity=0.589  Sum_probs=54.8

Q ss_pred             CeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCC-CCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCC
Q psy13160         83 TGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH-NSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPC  160 (186)
Q Consensus        83 ~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C  160 (186)
                      ..|+++.++|.|.|.+||.+ ..+..|+ ++++|. +.+|.  ..|+++.++| .|.|++||.+.. .++.|. +++++
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l-~~g~~C~-dideC~~~~~C~--~~C~n~~gsy-~C~C~~Gy~l~~-~~~~C~-~~~~~  395 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQL-VAQRRCE-DIDECQDPDTCS--QLCVNLEGGY-KCQCEEGFQLDP-HTKACK-AVGSI  395 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEE-ETTTEEE-CCCCCSSSSSCT--TTCCBCSSCB-CCCCCSSEECCS-SCCCCE-ETTSC
T ss_pred             ccccCCCCCcccCCCCCCcc-CCCCccc-cCcccCCCCCCC--CeeecCCCCc-eeecCCCCEeCC-CCceee-ecccc
Confidence            48999999999999999974 2223898 899997 34564  5899999999 999999998653 345673 55544

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.69  E-value=2.5e-08  Score=76.52  Aligned_cols=76  Identities=24%  Similarity=0.664  Sum_probs=60.2

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC-CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCC
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTI  150 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~  150 (186)
                      +||...++...+.|+++.++|.|.|.+||.+ ..+..|+ +++||.. .+|..  .|+++.++| .|.|.+||.+.. .+
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~-dideC~~~~~C~~--~C~n~~g~~-~C~C~~g~~~~~-~~   74 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCE-DIDECQDPDTCSQ--LCVNLEGGY-KCQCEEGFQLDP-HT   74 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEE-ECCCCSTTSSCSS--CCBCCSSSC-BCCCCTTCCCCT-TT
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCccc-CchhhhccCCCCC--ccCCCccce-eeeccccccccc-cc
Confidence            4676666666679999999999999999985 2233897 9999973 67764  899999999 999999998753 23


Q ss_pred             CCC
Q psy13160        151 RGC  153 (186)
Q Consensus       151 ~~c  153 (186)
                      +.|
T Consensus        75 ~~C   77 (400)
T 3p5b_L           75 KAC   77 (400)
T ss_dssp             SSC
T ss_pred             cce
Confidence            455

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.66  E-value=3.5e-09  Score=80.85  Aligned_cols=70  Identities=26%  Similarity=0.614  Sum_probs=14.5

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCC-CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        112 PLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCE-PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       112 ~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ++++|..+++.....|.+..++| .|.|++||.+.. .++.| .++++|. ..+|.+  .|+|+ ++|+|.|++||+
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~-~C~C~~G~~l~~-~~~~C-~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~   73 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAV-QCTCHTGYRLTE-DGRTC-QDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYE   73 (386)
T ss_dssp             -----------------------------------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred             CcCcccCCCCCCCCCCcCCCCCc-EeECCCCceECC-CCCcc-CccceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence            57888766644445898888899 999999998542 35689 5999997 578975  59998 899999999983

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.65  E-value=5.3e-09  Score=79.86  Aligned_cols=80  Identities=28%  Similarity=0.665  Sum_probs=19.4

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCC-CCCCCCCCeeeeCCCCeeeeeCCCCCccCCC
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH-NSPCGPNTQCSLLDNGFAQCTCLPGYVESPN  148 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~  148 (186)
                      ++++|..+++.....|.+..++|.|.|.+||.+.+++..|+ ++++|. ..+|.+  .|+++.++| .|.|++||...+ 
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~--~C~~~~g~~-~C~C~~g~~l~~-   76 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQ--GCTNSEGAF-QCWCEAGYELRP-   76 (386)
T ss_dssp             ---------------------------------------------------CCTT--EEC-----C-CEECCTTEEECT-
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCcccC--cCCCCCCCC-eEEECCCceEcC-
Confidence            56788766654445898888899999999999665555897 999997 467875  499999999 999999998543 


Q ss_pred             CCCCCc
Q psy13160        149 TIRGCV  154 (186)
Q Consensus       149 ~~~~c~  154 (186)
                      .++.|.
T Consensus        77 d~~~C~   82 (386)
T 3v65_B           77 DRRSCK   82 (386)
T ss_dssp             TSSCEE
T ss_pred             CCCeEC
Confidence            345663

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.57  E-value=5.2e-08  Score=52.79  Aligned_cols=45  Identities=11%  Similarity=0.271  Sum_probs=35.9

Q ss_pred             CCcCCCCCCCCCCCCCCCeee-----eCCCCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        108 PCTLPLNPCHNSPCGPNTQCS-----LLDNGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       108 ~c~~~~~~C~~~~C~~~~~C~-----~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      .|..++++|.++||.++++|.     +..++| .|.|++||+|.     .|+..|.
T Consensus         3 ~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y-~C~C~~g~~G~-----~CE~~v~   52 (55)
T 3u7u_G            3 SHLVKCAEKEKTFCVNGGECFMVKDLSNPSRY-LCKCPNEFTGD-----RCQNYVM   52 (55)
T ss_dssp             CCEEECCSTTTTTSCTTCEEEEECCC--CCCE-EEEECTTEEST-----TSCEECC
T ss_pred             CCcccCCCCcCCCCCCCCCcCCCCccCCCCCE-eEeCCCCCcCC-----CcCccCc
Confidence            566678999999999999994     566789 99999999976     7865443

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.56  E-value=1.1e-07  Score=47.88  Aligned_cols=37  Identities=22%  Similarity=0.269  Sum_probs=31.2

Q ss_pred             CCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCcc
Q psy13160         12 NDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAF   68 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~   68 (186)
                      +|+|+|.++||.+++.|++ .++|.|.|+                    .||.|..|+
T Consensus         1 ~d~d~C~~~pC~ngg~C~~~~~~~~C~C~--------------------~G~~G~~Ce   38 (39)
T 1edm_B            1 VDGDQCESNPCLNGGSCKDDINSYECWCP--------------------FGFEGKNCE   38 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEEETTEEEEECC--------------------TTCCSTTSC
T ss_pred             CccccCCCCCCCCCCEeEcCCCceEeECC--------------------CCCcCCccC
Confidence            3789999999999999999 998888654                    488888875

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.55  E-value=2.5e-07  Score=71.32  Aligned_cols=86  Identities=23%  Similarity=0.596  Sum_probs=56.0

Q ss_pred             eeeCCCCCCCCCccCCC----------CCCC-CCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCC------CCCC
Q psy13160         55 ECLCNSDCPFNMAFPEG----------DECS-PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPL------NPCH  117 (186)
Q Consensus        55 ~C~C~~g~~~~~c~~~~----------~~C~-~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~------~~C~  117 (186)
                      .|.|.+||.|..|+...          ++|. ..+|.+.+.|.  .+.+.|.|.+||.|.    .|+..-      +.|.
T Consensus       217 ~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~----~C~~~C~~G~~G~~C~  290 (423)
T 2gy5_A          217 ECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGL----QCNEACHPGFYGPDCK  290 (423)
T ss_dssp             CEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSG----GGCBCCCTTBCSBTTC
T ss_pred             cEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccc----cccCccCCCCcCCccc
Confidence            44555677777665211          2343 34677777884  567899999999988    775100      1232


Q ss_pred             C-CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCcc
Q psy13160        118 N-SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVE  155 (186)
Q Consensus       118 ~-~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~  155 (186)
                      . -+|.+++.|.+..    .|.|++||+|.     .|+.
T Consensus       291 ~~C~C~ngg~C~~~~----~C~C~~G~~G~-----~Ce~  320 (423)
T 2gy5_A          291 LRCSCNNGEMCDRFQ----GCLCSPGWQGL-----QCER  320 (423)
T ss_dssp             CBCCCTTCCEEETTT----EEECCTTCBST-----TSCB
T ss_pred             ccccCCCCCEecCCC----ceECCCCCcCC-----CCcc
Confidence            1 1577888997653    69999999976     6753

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.41  E-value=1.1e-06  Score=71.91  Aligned_cols=92  Identities=21%  Similarity=0.498  Sum_probs=63.7

Q ss_pred             eeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCC-CCCCCCCCeeeeCCCCe
Q psy13160         56 CLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH-NSPCGPNTQCSLLDNGF  134 (186)
Q Consensus        56 C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~-~~~C~~~~~C~~~~~~~  134 (186)
                      +.|..|+.+....-++++|..........|+++.++|.|.|.+||.+ ..+..|+ ++++|. ..+|.  ..|+++.++|
T Consensus       279 ~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~-dideC~~~~~C~--~~C~n~~g~y  354 (699)
T 1n7d_A          279 RDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCE-DIDECQDPDTCS--QLCVNLEGGY  354 (699)
T ss_dssp             CCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCC-CCCCCSSSSSCT--TTCCBCSSCB
T ss_pred             ceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCccc-CccccCCCCccc--cccccCCCCe
Confidence            34444443322222466675432112357999999999999999986 3344898 999997 46785  4799999999


Q ss_pred             eeeeCCCCCccCCCCCCCC
Q psy13160        135 AQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       135 ~~C~C~~g~~~~~~~~~~c  153 (186)
                       .|.|++||.+.. .++.|
T Consensus       355 -~C~C~~G~~~~~-~~~~C  371 (699)
T 1n7d_A          355 -KCQCEEGFQLDP-HTKAC  371 (699)
T ss_dssp             -CCCCCSSCBCCS-SCCCC
T ss_pred             -eeeeecccccCC-CCCcc
Confidence             999999998753 23456

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.40  E-value=6.6e-07  Score=44.99  Aligned_cols=37  Identities=32%  Similarity=0.794  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++++|.++||.+++.|++..++|.|.|++||.|.    .|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~----~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK----NCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST----TSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC----ccC
Confidence            5788988999999999999999999999999988    764

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.31  E-value=3e-07  Score=72.94  Aligned_cols=81  Identities=16%  Similarity=0.334  Sum_probs=28.4

Q ss_pred             eCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeC----CCCeeeeeCCCCCccCCCCCCCCc----------cCCCCC
Q psy13160         95 FCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLL----DNGFAQCTCLPGYVESPNTIRGCV----------ERRQPC  160 (186)
Q Consensus        95 ~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~----~~~~~~C~C~~g~~~~~~~~~~c~----------~~~~~C  160 (186)
                      +|.+||.+.    .+. ....|...+|...+.|.+.    ...+ .|.|++||.|.     .|+          .+++.|
T Consensus       422 ~C~~Gy~G~----~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg-~C~C~~g~~G~-----~Ce~C~~G~~g~~~~~~~C  490 (525)
T 4aqs_A          422 VCKEGFYDL----SAE-DPYGCKSCACNPLGTIPGGNPCDSETG-YCYCKRLVTGQ-----RCDQCLPQHWGLSNDLDGC  490 (525)
T ss_dssp             EECTTEECC----CTT-STTSSEECCCCTTTBCCSSCCBCTTTC-CBCBCTTCCST-----TTCC---------------
T ss_pred             CCCCCCcCC----CCC-CCCCCccCCCCCCceecCCCcccCCCC-EEECCCCCcCC-----CcccCCCCccCCCCCCCCC
Confidence            466666665    443 3445554455554444332    2344 79999999876     553          244667


Q ss_pred             CCCCCCCCCeecCC---CCCeeeCCCCCC
Q psy13160        161 EPNVCGAGAVCDPN---RAPYCFCPEGTM  186 (186)
Q Consensus       161 ~~~~C~~~~~C~~~---~~~~C~C~~g~~  186 (186)
                      .+-+|.+++.+.+.   ..++|.|++||+
T Consensus       491 ~~C~C~~~gs~~~~C~~~tG~C~C~~G~~  519 (525)
T 4aqs_A          491 RPCDCDLGGALNNSCSEDSGQCSCLPHMI  519 (525)
T ss_dssp             -----------------------------
T ss_pred             cCCCCCCCCccCCccCCCCCeeECCCCCc
Confidence            66677776666543   345799999985

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.31  E-value=3e-07  Score=64.40  Aligned_cols=80  Identities=23%  Similarity=0.520  Sum_probs=59.6

Q ss_pred             ceeeCCCCCCCCCccCCCC---------CCC----CCCCCCCCeeeecCCCeEeeCCCC------CcCCCCCCCCcCCCC
Q psy13160         54 PECLCNSDCPFNMAFPEGD---------ECS----PNPCGPYTGCRVVSGSAVCFCLPE------YTGDPPSVPCTLPLN  114 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~~~~~---------~C~----~~~c~~~~~C~~~~~~~~C~c~~g------~~~~~~~~~c~~~~~  114 (186)
                      ..|.|.+||.|..|+...+         .|.    ..+|..++.|+.    ..|.|.+|      |.|.    .|+.+++
T Consensus       107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~----~Ce~~~~  178 (217)
T 2p28_B          107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIYGQ----YCECDTI  178 (217)
T ss_dssp             TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCEEST----TSCEESS
T ss_pred             CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccEECC----CcccCCc
Confidence            6788999999999973332         243    246777788873    37999999      5777    8864566


Q ss_pred             CCCCC---CCCCC--CeeeeCCCCeeeeeCCCCCccC
Q psy13160        115 PCHNS---PCGPN--TQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       115 ~C~~~---~C~~~--~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      .|...   +|..+  ++|...     .|.|.+||+|.
T Consensus       179 ~C~~~~g~~C~~~~~G~C~~g-----~C~C~~G~~G~  210 (217)
T 2p28_B          179 NCERYNGQVCGGPGRGLCFCG-----KCRCHPGFEGS  210 (217)
T ss_dssp             CSCEETTEETTCTTTEEEETT-----EEEECTTEEST
T ss_pred             cCCCCCCCCCCCCCCcEEeCC-----eeECCCCCccC
Confidence            78643   68777  899852     89999999976

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.23  E-value=2.5e-06  Score=45.94  Aligned_cols=41  Identities=24%  Similarity=0.559  Sum_probs=33.5

Q ss_pred             CCCCCCCC---CCCCCCeee--eCCCCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        112 PLNPCHNS---PCGPNTQCS--LLDNGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       112 ~~~~C~~~---~C~~~~~C~--~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      ++++|.+.   ||.++++|+  +..++| .|.|++||+|.     .|+.++.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~-~C~C~~G~~G~-----~Ce~~~~   47 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSY-TCNCVIGYSGD-----RCQTRDL   47 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCE-EEECCTTCCSS-----SSCCCSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCE-EEECCCCCcCC-----cCCccCc
Confidence            46778775   999999999  788899 99999999875     7865443

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.17  E-value=2.6e-06  Score=44.19  Aligned_cols=38  Identities=21%  Similarity=0.403  Sum_probs=29.9

Q ss_pred             CCCCC---CCCCCCeee--eCCCCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        115 PCHNS---PCGPNTQCS--LLDNGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       115 ~C~~~---~C~~~~~C~--~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      +|.+.   ||.++++|+  +..++| .|.|++||+|.     .|+.+++
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~-~C~C~~G~~G~-----~Ce~~~~   44 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSY-TCNCVIGYSGD-----RCQTRDL   44 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSE-EEECCTTEETT-----TTCEECC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCE-EEEcCCCCcCC-----cCCcccC
Confidence            45555   899999998  677889 99999999876     7865443

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.10  E-value=4.2e-07  Score=50.30  Aligned_cols=34  Identities=32%  Similarity=0.926  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCC--CeeeeCCCCeeeeeCCCCCc-cC
Q psy13160        112 PLNPCHNSPCGPN--TQCSLLDNGFAQCTCLPGYV-ES  146 (186)
Q Consensus       112 ~~~~C~~~~C~~~--~~C~~~~~~~~~C~C~~g~~-~~  146 (186)
                      .+++|.++||.++  ++|+++.++| .|.|++||+ |.
T Consensus        10 ~~d~C~snPC~nga~gtC~~~~g~y-~C~C~~Gy~~G~   46 (61)
T 2k2s_B           10 TPAACSSNPCGPEAAGTCKETNSGY-ICRCNQGYRISL   46 (61)
T ss_dssp             SCCHHHHCSSCSSSCCEEEECSSEE-EEECCTTEEEEE
T ss_pred             CCCcCcCCCCcCCCccccccCCCce-EeECCCCCccCC
Confidence            6788988999988  7999999999 999999998 76

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.09  E-value=7.2e-06  Score=44.09  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=33.0

Q ss_pred             CCCCCCCC---CCCCCCeee--ecCCCeEeeCCCCCcCCCCCCCCcCCC
Q psy13160         70 EGDECSPN---PCGPYTGCR--VVSGSAVCFCLPEYTGDPPSVPCTLPL  113 (186)
Q Consensus        70 ~~~~C~~~---~c~~~~~C~--~~~~~~~C~c~~g~~~~~~~~~c~~~~  113 (186)
                      ++++|.+.   ||.++++|+  +..++|.|.|++||.|.    .|+..+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~----~Ce~~~   46 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD----RCQTRD   46 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS----SSCCCS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC----cCCccC
Confidence            45778765   999999999  67789999999999998    886433

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.08  E-value=1.1e-06  Score=61.57  Aligned_cols=94  Identities=24%  Similarity=0.463  Sum_probs=64.8

Q ss_pred             CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCC---------CCC----CCCCCCCCeeeeCCCCeeeeeCCCCC
Q psy13160         77 NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLN---------PCH----NSPCGPNTQCSLLDNGFAQCTCLPGY  143 (186)
Q Consensus        77 ~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~---------~C~----~~~C~~~~~C~~~~~~~~~C~C~~g~  143 (186)
                      ..|..++.|+.    ..|.|.+||.|.    .|+.+++         .|.    ..+|..+++|+..     .|.|.+||
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G~~G~----~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g-----~C~C~~gw  162 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTGYIGK----NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-----QCLCHTSD  162 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTTEEST----TSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT-----EEEECCCC
T ss_pred             CccCCCceEEC----CEEECCCCccCC----cccccCcccccccCCCcCCCCCCCCCCCCCCEEeCC-----ceECCCCC
Confidence            45777788863    379999999999    7763322         243    2468778899742     89999995


Q ss_pred             ccCC-CCCCCCccCCCCCCCC---CCCCC--CeecCCCCCeeeCCCCCC
Q psy13160        144 VESP-NTIRGCVERRQPCEPN---VCGAG--AVCDPNRAPYCFCPEGTM  186 (186)
Q Consensus       144 ~~~~-~~~~~c~~~~~~C~~~---~C~~~--~~C~~~~~~~C~C~~g~~  186 (186)
                      .+.. +.|..|+.+++.|...   +|..+  ++|..   .+|.|.+||+
T Consensus       163 ~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~---g~C~C~~G~~  208 (217)
T 2p28_B          163 VPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC---GKCRCHPGFE  208 (217)
T ss_dssp             STTCCEESTTSCEESSCSCEETTEETTCTTTEEEET---TEEEECTTEE
T ss_pred             CCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC---CeeECCCCCc
Confidence            2110 1134887667788653   68776  88875   3799999984

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.04  E-value=1.4e-06  Score=48.77  Aligned_cols=42  Identities=19%  Similarity=0.485  Sum_probs=34.8

Q ss_pred             CCCCCCCCCCCCeeee-----CCCCeeeeeCCCCCccCCCCCCCCccCCCCCC
Q psy13160        114 NPCHNSPCGPNTQCSL-----LDNGFAQCTCLPGYVESPNTIRGCVERRQPCE  161 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~-----~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~  161 (186)
                      ++|.++||.++++|++     ..++| .|.|++||+|.     .|+.+++++.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y-~C~C~~Gf~G~-----~Ce~~i~~~~   53 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRY-LCKCQPGFTGA-----RCTENVPMKV   53 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCE-EEECCTTEEST-----TSCEECCSSC
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCE-EEECCCCCcCC-----ccCcCcCccc
Confidence            5566789999999986     66789 99999999876     8977788775

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.97  E-value=9.4e-07  Score=48.88  Aligned_cols=37  Identities=32%  Similarity=0.710  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCCC--CeeeecCCCeEeeCCCCCc-CCCCCCCCc
Q psy13160         70 EGDECSPNPCGPY--TGCRVVSGSAVCFCLPEYT-GDPPSVPCT  110 (186)
Q Consensus        70 ~~~~C~~~~c~~~--~~C~~~~~~~~C~c~~g~~-~~~~~~~c~  110 (186)
                      .+++|.++||.++  ++|++..++|.|.|++||. |.    .|+
T Consensus        10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~----~C~   49 (61)
T 2k2s_B           10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL----DGT   49 (61)
T ss_dssp             SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE----CSS
T ss_pred             CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC----CCC
Confidence            6788988999998  7999999999999999999 88    786

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.97  E-value=9e-06  Score=42.10  Aligned_cols=37  Identities=22%  Similarity=0.289  Sum_probs=29.7

Q ss_pred             CCCCC---CCCCCCeee--ecCCCeEeeCCCCCcCCCCCCCCcCCC
Q psy13160         73 ECSPN---PCGPYTGCR--VVSGSAVCFCLPEYTGDPPSVPCTLPL  113 (186)
Q Consensus        73 ~C~~~---~c~~~~~C~--~~~~~~~C~c~~g~~~~~~~~~c~~~~  113 (186)
                      +|.+.   ||.++++|+  +..++|.|.|++||.|.    .|+.++
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~----~Ce~~~   43 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGD----RCQTRD   43 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETT----TTCEEC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCC----cCCccc
Confidence            45555   899999998  56689999999999998    886333

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.88  E-value=1.1e-05  Score=41.97  Aligned_cols=36  Identities=14%  Similarity=0.187  Sum_probs=28.2

Q ss_pred             CCCCCCCC---CCCCCCCeecc-C--CCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCcc
Q psy13160         12 NDSLACKP---NPCDPYSSCSV-Y--SEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAF   68 (186)
Q Consensus        12 ~~~~~c~~---~~C~~~~~C~~-~--~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~   68 (186)
                      ++|++|.+   +||.+ |.|++ .  ++|.|.                    |.+||+|.+|+
T Consensus         1 ~~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~--------------------C~~GytG~~Ce   42 (46)
T 1k36_A            1 VSITKCSSDMNGYCLH-GQCIYLVDMSQNYCR--------------------CEVGYTGVRCE   42 (46)
T ss_dssp             CCEECCCTTCCSSCSS-EEEEEETTTTEEEEE--------------------ECTTCSSTTSC
T ss_pred             CccccCCCCCCCCCCC-CEeeccCCCCCEEEE--------------------CCCCCccCCCC
Confidence            36888987   89987 89987 4  566665                    55699999997

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.85  E-value=5e-06  Score=46.45  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=35.0

Q ss_pred             CCCCCCCCCCCCeeee-----cCCCeEeeCCCCCcCCCCCCCCcCCCCCCCC
Q psy13160         72 DECSPNPCGPYTGCRV-----VSGSAVCFCLPEYTGDPPSVPCTLPLNPCHN  118 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~-----~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~  118 (186)
                      ++|.++||.++++|++     ..+.|.|.|.+||.|.    .|+.+++++..
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~----~Ce~~i~~~~~   54 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA----RCTENVPMKVQ   54 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST----TSCEECCSSCT
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC----ccCcCcCcccc
Confidence            4566789999999986     4578999999999999    99756776653

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.83  E-value=1.8e-06  Score=67.41  Aligned_cols=77  Identities=26%  Similarity=0.624  Sum_probs=37.4

Q ss_pred             eeeCCCCCCCCCccCCCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCe
Q psy13160         55 ECLCNSDCPFNMAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGF  134 (186)
Q Consensus        55 ~C~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~  134 (186)
                      ...|..+|.+..|+  +++|.. +|.+ +.|+..   +.|.|.+||.+.    .|+  +++|.+ +|.++++|++.   +
T Consensus       378 p~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~----~C~--~~~C~~-~C~~~g~C~~~---~  440 (463)
T 2wg3_C          378 PEECRATVQPAQTL--TSECSR-LCRN-GYCTPT---GKCCCSPGWEGD----FCR--TAKCEP-ACRHGGVCVRP---N  440 (463)
T ss_dssp             CGGGCCCCCCCCCC--CCHHHH-HCCS-EEECTT---SCEEECTTEEST----TSC--EECC------------------
T ss_pred             cccCCCCCcCCCCc--cccccC-CCCC-CccCCC---CeECCCCCcCCC----cCC--cCcCCC-CCCCCCEECCC---C
Confidence            45788899998885  456753 5876 789643   479999999999    894  567876 89998999865   5


Q ss_pred             eeeeCCCCCccCCCCCCCCc
Q psy13160        135 AQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       135 ~~C~C~~g~~~~~~~~~~c~  154 (186)
                       .|.|.+||+|.     .|+
T Consensus       441 -~C~C~~G~~G~-----~C~  454 (463)
T 2wg3_C          441 -KCLCKKGYLGP-----QCE  454 (463)
T ss_dssp             --------------------
T ss_pred             -EEECCCCcccC-----CCC
Confidence             89999999876     775

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.74  E-value=3.7e-06  Score=65.63  Aligned_cols=71  Identities=27%  Similarity=0.649  Sum_probs=34.0

Q ss_pred             eeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecC
Q psy13160         94 CFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDP  173 (186)
Q Consensus        94 C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~  173 (186)
                      ..|..+|.+.    .|.  +++|.. +|.+ +.|.+.   + .|.|.+||+|.     .|+  ++.|.+ +|.++++|++
T Consensus       379 ~~C~~~~~g~----~c~--~~~C~~-~C~n-G~C~~~---~-~C~C~~G~~G~-----~C~--~~~C~~-~C~~~g~C~~  438 (463)
T 2wg3_C          379 EECRATVQPA----QTL--TSECSR-LCRN-GYCTPT---G-KCCCSPGWEGD-----FCR--TAKCEP-ACRHGGVCVR  438 (463)
T ss_dssp             GGGCCCCCCC----CCC--CCHHHH-HCCS-EEECTT---S-CEEECTTEEST-----TSC--EECC-------------
T ss_pred             ccCCCCCcCC----CCc--cccccC-CCCC-CccCCC---C-eECCCCCcCCC-----cCC--cCcCCC-CCCCCCEECC
Confidence            4567777776    663  456653 5875 789753   3 89999999976     784  467876 8988899986


Q ss_pred             CCCCeeeCCCCCC
Q psy13160        174 NRAPYCFCPEGTM  186 (186)
Q Consensus       174 ~~~~~C~C~~g~~  186 (186)
                      .  ++|.|++||+
T Consensus       439 ~--~~C~C~~G~~  449 (463)
T 2wg3_C          439 P--NKCLCKKGYL  449 (463)
T ss_dssp             -------------
T ss_pred             C--CEEECCCCcc
Confidence            4  6899999985

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.61  E-value=3.1e-05  Score=41.92  Aligned_cols=43  Identities=30%  Similarity=0.572  Sum_probs=32.9

Q ss_pred             CCCCC--CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCC
Q psy13160         72 DECSP--NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        72 ~~C~~--~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~  117 (186)
                      |+|..  .+|.  ..|+++.++|.|.|.+||....+++.|. ++++|.
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~-didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACI-PTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEE-ESSSSC
T ss_pred             ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeec-cCcccc
Confidence            45543  3464  3899999999999999998776666887 788764

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.57  E-value=3.7e-05  Score=41.58  Aligned_cols=43  Identities=23%  Similarity=0.557  Sum_probs=31.9

Q ss_pred             CCCCC--CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCC
Q psy13160        114 NPCHN--SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCE  161 (186)
Q Consensus       114 ~~C~~--~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~  161 (186)
                      ++|..  ..|.  ..|+|+.++| .|.|++||.... +++.| .++++|+
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gsy-~C~C~~Gy~L~~-d~~~C-~didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNSV-VCSCARGYTLAD-NGKAC-IPTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTEE-EEECCTTEEECT-TSSCE-EESSSSC
T ss_pred             ccccCCCCCcC--cEeEcCCCCe-EEeCCCCCEECC-CCCee-ccCcccc
Confidence            45543  3465  3899999999 999999998543 46678 4888874

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.56  E-value=5.9e-05  Score=39.11  Aligned_cols=36  Identities=28%  Similarity=0.548  Sum_probs=29.5

Q ss_pred             CCCCCCC---CCCCCCCeeeecC--CCeEeeCCCCCcCCCCCCCCc
Q psy13160         70 EGDECSP---NPCGPYTGCRVVS--GSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        70 ~~~~C~~---~~c~~~~~C~~~~--~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++++|.+   +||.+ ++|....  +.|.|.|.+||+|.    .|+
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~----~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGV----RCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSST----TSC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccC----CCC
Confidence            4566766   89998 7998754  57999999999999    886

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.48  E-value=0.00015  Score=43.53  Aligned_cols=67  Identities=28%  Similarity=0.618  Sum_probs=48.9

Q ss_pred             CCCCCCCCCCeeeeC-CCCeeeeeCCCCCccCCCCCCCCccCC-CCCCC--CCCCCCCeecCCC------CCeeeCCCCC
Q psy13160        116 CHNSPCGPNTQCSLL-DNGFAQCTCLPGYVESPNTIRGCVERR-QPCEP--NVCGAGAVCDPNR------APYCFCPEGT  185 (186)
Q Consensus       116 C~~~~C~~~~~C~~~-~~~~~~C~C~~g~~~~~~~~~~c~~~~-~~C~~--~~C~~~~~C~~~~------~~~C~C~~g~  185 (186)
                      |....|..++.|.+. .+.. .|+|.+||.++   +..|..+. +.|..  .-|+.+|+|...+      ...|.|.+||
T Consensus         7 C~~~~C~~NA~C~r~~~g~e-~C~C~~gy~gd---g~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C            7 CVKKQCPQNSGCFRHLDERE-ECKCLLNYKQE---GDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             CCSCCCCTTEEEECCTTSCC-EEEECTTEEEE---TTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred             eccCCCCCCCCeEEcCCCCE-EEEecCCeecC---CCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence            333457778889874 5566 89999999987   56784322 57875  3499999998552      4899999997


Q ss_pred             C
Q psy13160        186 M  186 (186)
Q Consensus       186 ~  186 (186)
                      .
T Consensus        83 ~   83 (99)
T 1ob1_C           83 S   83 (99)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.48  E-value=0.0003  Score=42.54  Aligned_cols=66  Identities=27%  Similarity=0.527  Sum_probs=50.2

Q ss_pred             CCCCCCCCCCeeee-CCCCeeeeeCCCCCccCCCCCCCCccCCCC-CCC--CCCCCCCeecCCC--CCeeeCCCCCC
Q psy13160        116 CHNSPCGPNTQCSL-LDNGFAQCTCLPGYVESPNTIRGCVERRQP-CEP--NVCGAGAVCDPNR--APYCFCPEGTM  186 (186)
Q Consensus       116 C~~~~C~~~~~C~~-~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~-C~~--~~C~~~~~C~~~~--~~~C~C~~g~~  186 (186)
                      |....|..++.|.+ ..+.. .|+|..||.++   +..|. .++. |..  .-|+.+|+|...+  ...|.|.++|.
T Consensus        13 C~~t~Cp~NA~C~r~~~G~e-~CrCl~gY~~d---g~~Cv-~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           13 CIDTNVPENAACYRYLDGTE-EWRCLLGFKEV---GGKCV-PASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             CCSSCCCTTEEEEECTTSCE-EEEECTTEEEC---SSSEE-ECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             ecCCCCCCCCCeEECCCCCE-eEEEECCeecc---CCEEE-ECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            44445777889988 55666 89999999987   67784 4476 754  3499999998763  67999999873

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.44  E-value=0.00015  Score=38.76  Aligned_cols=39  Identities=28%  Similarity=0.637  Sum_probs=29.3

Q ss_pred             CCCCCCC----------CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         70 EGDECSP----------NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        70 ~~~~C~~----------~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++++|..          .+|.  ..|+++.++|.|.|.+||.+...++.|.
T Consensus         3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECCCCCccC
Confidence            5667753          4565  4899999999999999998775544553

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.38  E-value=0.00011  Score=41.72  Aligned_cols=46  Identities=24%  Similarity=0.437  Sum_probs=35.6

Q ss_pred             CCCCCCCCC--CCCCCCeeeecCC-CeEeeCCCCCcCCCCCCCCcCCCCCCC
Q psy13160         69 PEGDECSPN--PCGPYTGCRVVSG-SAVCFCLPEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        69 ~~~~~C~~~--~c~~~~~C~~~~~-~~~C~c~~g~~~~~~~~~c~~~~~~C~  117 (186)
                      .++++|...  .|.  ..|+++.+ +|.|.|.+||....+++.|. +++++.
T Consensus         3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~-d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSSC
T ss_pred             cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCccc-Cccccc
Confidence            367788643  354  48999998 89999999999877777887 787764

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.36  E-value=6.9e-05  Score=42.76  Aligned_cols=25  Identities=16%  Similarity=0.445  Sum_probs=21.5

Q ss_pred             CCCCCCC--CCCCCCCeecCC-CCCeee
Q psy13160        156 RRQPCEP--NVCGAGAVCDPN-RAPYCF  180 (186)
Q Consensus       156 ~~~~C~~--~~C~~~~~C~~~-~~~~C~  180 (186)
                      +||+|..  ++|..++.|+|+ ++|+|.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~   29 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCL   29 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEec
Confidence            6889974  579878899999 999999

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.34  E-value=0.00024  Score=37.92  Aligned_cols=32  Identities=31%  Similarity=0.834  Sum_probs=26.2

Q ss_pred             CCCCCCC----------CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        112 PLNPCHN----------SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       112 ~~~~C~~----------~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      +|++|..          .+|.  ..|+++.++| .|.|++||.+.
T Consensus         3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy-~C~C~~Gy~~~   44 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGY-FCSCRPGYELQ   44 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEE-EEECSTTCEEC
T ss_pred             ccccccCcccccccccCCCCC--CEeECCCCCe-EEECCCCCeEC
Confidence            5677764          4575  4899999999 99999999875

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.33  E-value=0.00015  Score=57.57  Aligned_cols=87  Identities=23%  Similarity=0.489  Sum_probs=33.2

Q ss_pred             cee-eCCCCCCCCCccCCCCCCCCCCCCCCCeeeec----CCCeEeeCCCCCcCCCCCCCCcC----------CCCCCCC
Q psy13160         54 PEC-LCNSDCPFNMAFPEGDECSPNPCGPYTGCRVV----SGSAVCFCLPEYTGDPPSVPCTL----------PLNPCHN  118 (186)
Q Consensus        54 ~~C-~C~~g~~~~~c~~~~~~C~~~~c~~~~~C~~~----~~~~~C~c~~g~~~~~~~~~c~~----------~~~~C~~  118 (186)
                      ..| .|..||.|..+. ..+.|..-+|...+.|.+.    ..++.|.|.+||.|.    .|+.          .++.|.+
T Consensus       418 ~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~----~Ce~C~~G~~g~~~~~~~C~~  492 (525)
T 4aqs_A          418 ERCDVCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQ----RCDQCLPQHWGLSNDLDGCRP  492 (525)
T ss_dssp             TTTCEECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCST----TTCC-----------------
T ss_pred             CcccCCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCC----CcccCCCCccCCCCCCCCCcC
Confidence            344 577777777664 4455655556555554432    234579999999988    7741          3455665


Q ss_pred             CCCCCCCeeeeC--CCCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCSLL--DNGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~~~--~~~~~~C~C~~g~~~~  146 (186)
                      .+|..++.+...  .... .|.|++||.|.
T Consensus       493 C~C~~~gs~~~~C~~~tG-~C~C~~G~~G~  521 (525)
T 4aqs_A          493 CDCDLGGALNNSCSEDSG-QCSCLPHMIGR  521 (525)
T ss_dssp             ------------------------------
T ss_pred             CCCCCCCccCCccCCCCC-eeECCCCCcCC
Confidence            566665544332  2234 79999999876

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.31  E-value=4.6e-05  Score=55.07  Aligned_cols=43  Identities=26%  Similarity=0.689  Sum_probs=34.5

Q ss_pred             CCCCCC--CCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCC
Q psy13160        112 PLNPCH--NSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQP  159 (186)
Q Consensus       112 ~~~~C~--~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~  159 (186)
                      ++|||.  ..+|..++.|+|+.++| .|.|++||.++   |+.|. ++|.
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gsy-~C~C~~Gy~Gn---G~~C~-d~d~   48 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATGF-CCRCVANYTGN---GRQCV-AEGS   48 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSCE-EEEECTTEEEC---SSSEE-ETTC
T ss_pred             cchhccCCCCCCCCCCEeEcCCCCe-EEEcCCCCCCC---CCcCC-CCCC
Confidence            678897  46799889999999999 99999999987   67884 7765

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.29  E-value=0.00015  Score=41.05  Aligned_cols=45  Identities=22%  Similarity=0.355  Sum_probs=34.1

Q ss_pred             CCCCCCC--CCCCCCCeeeeCCC-CeeeeeCCCCCccCCCCCCCCccCCCCCC
Q psy13160        112 PLNPCHN--SPCGPNTQCSLLDN-GFAQCTCLPGYVESPNTIRGCVERRQPCE  161 (186)
Q Consensus       112 ~~~~C~~--~~C~~~~~C~~~~~-~~~~C~C~~g~~~~~~~~~~c~~~~~~C~  161 (186)
                      ++++|..  +.|.  ..|+++.+ +| .|.|++||.... +++.| .++++|.
T Consensus         4 d~~eC~~~nggC~--h~C~n~~g~s~-~C~C~~Gy~L~~-D~~tC-~d~dec~   51 (69)
T 1kli_L            4 DQLICVNENGGCE--QYCSDHTGTKR-SCRCHEGYSLLA-DGVSC-TPTVEYP   51 (69)
T ss_dssp             CCCCTTSGGGGCS--SEEEEETTTEE-EEECCTTEEECT-TSSCE-EECSSSC
T ss_pred             ccccccCCCCCcC--CEeEcCCCCCE-EEeCCCCCeECC-CCCcc-cCccccc
Confidence            6788864  3464  47999998 78 999999998653 46788 4888874

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.25  E-value=2.4e-05  Score=41.85  Aligned_cols=31  Identities=23%  Similarity=0.400  Sum_probs=25.4

Q ss_pred             CCCCCCCCeeeec----CCCeEeeCCCCCcCCCCCCCCc
Q psy13160         76 PNPCGPYTGCRVV----SGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        76 ~~~c~~~~~C~~~----~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++||.++++|+..    .+.|.|.|.+||.|.    .|+
T Consensus        13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~----~Ce   47 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQ----RCE   47 (52)
T ss_dssp             HHTSCTTCEEEEEEETTEEEEEEECCTTEEST----TSC
T ss_pred             CCcCCCCCEEecCccCCCCCEEEECCCCCcCC----CCc
Confidence            3578889999863    457899999999998    886

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.06  E-value=0.00023  Score=47.41  Aligned_cols=43  Identities=19%  Similarity=0.617  Sum_probs=34.2

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCC
Q psy13160        113 LNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEP  162 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~  162 (186)
                      .++|...+|.++++|.+..++| .|.|++||.|.     .|+ .+++|.+
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~-~c~C~~g~~G~-----~Ce-~~~~c~~  161 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNY-TCSCYPGFYGP-----ECE-YVRDDDD  161 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSE-EEEECTTEEST-----TSC-EECC---
T ss_pred             eCCCcCCCCCCCCEEecCCCCc-eEeCCCCCcCc-----ccc-cCcccCC
Confidence            4567778898889999999999 99999999976     896 6678853

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.01  E-value=0.0006  Score=38.82  Aligned_cols=34  Identities=18%  Similarity=0.473  Sum_probs=26.7

Q ss_pred             CCCCCCC--CCCCCCCeeeeCCCCeeeee-CCCCCccC
Q psy13160        112 PLNPCHN--SPCGPNTQCSLLDNGFAQCT-CLPGYVES  146 (186)
Q Consensus       112 ~~~~C~~--~~C~~~~~C~~~~~~~~~C~-C~~g~~~~  146 (186)
                      +|+||..  .+|..++.|+|+.++| +|. +..||.+.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy-~C~~~~~g~~~~   38 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGY-LCLPRSAAVIND   38 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCE-EEEETTSCCCSC
T ss_pred             ccccccCCCCCCCCCCEeECCCCCe-EecccCCccccc
Confidence            6788874  4688778999999999 998 44577654

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.99  E-value=0.00027  Score=37.75  Aligned_cols=32  Identities=22%  Similarity=0.624  Sum_probs=26.5

Q ss_pred             CCCCCCCCeee--eCCCCeeeeeCCCCCccCCCCCCCCcc
Q psy13160        118 NSPCGPNTQCS--LLDNGFAQCTCLPGYVESPNTIRGCVE  155 (186)
Q Consensus       118 ~~~C~~~~~C~--~~~~~~~~C~C~~g~~~~~~~~~~c~~  155 (186)
                      .+||.++++|+  +..++| .|.|++||+|.     .|+.
T Consensus        11 ~~pC~nGG~C~~~~~~~~~-~C~C~~GytG~-----~Ce~   44 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKY-ACNCVVGYIGE-----RCQY   44 (53)
T ss_dssp             CCEECTTCEEEEETTTTEE-EEEECTTEEST-----TSCE
T ss_pred             CCCCCCCeEEeeecCCCCE-EEecCCCCcCC-----CCCc
Confidence            46899999998  667788 99999999976     7754

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.88  E-value=0.00033  Score=37.14  Aligned_cols=32  Identities=22%  Similarity=0.372  Sum_probs=27.3

Q ss_pred             eeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCC
Q psy13160         84 GCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPC  116 (186)
Q Consensus        84 ~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C  116 (186)
                      .|+++.++|.|.|.+||...++++.|. +++++
T Consensus        11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~-dide~   42 (51)
T 1kig_L           11 FCREERSEVRCSCAHGYVLGDDSKSCV-STERF   42 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEE-ECSSS
T ss_pred             EeEcCCCCeEEeCCCCcEECCCCCccc-cCCcc
Confidence            689999999999999998777666887 77775

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.79  E-value=0.00064  Score=35.98  Aligned_cols=32  Identities=22%  Similarity=0.541  Sum_probs=26.1

Q ss_pred             eeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCC
Q psy13160        126 QCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPC  160 (186)
Q Consensus       126 ~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C  160 (186)
                      .|+++.++| +|.|++||.... +++.| .+++++
T Consensus        11 ~C~n~~gs~-~C~C~~Gy~L~~-d~~tC-~dide~   42 (51)
T 1kig_L           11 FCREERSEV-RCSCAHGYVLGD-DSKSC-VSTERF   42 (51)
T ss_dssp             CCCEETTEE-CCCCCTTEEECT-TSSCE-EECSSS
T ss_pred             EeEcCCCCe-EEeCCCCcEECC-CCCcc-ccCCcc
Confidence            689999999 999999998543 46778 488877

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=96.70  E-value=0.0042  Score=37.59  Aligned_cols=69  Identities=22%  Similarity=0.568  Sum_probs=52.8

Q ss_pred             CCCCCCCCCCCeeee-cCCCeEeeCCCCCcCCCCCCCCcCCCCC-CCC--CCCCCCCeeeeCC-CCeeeeeCCCCCcc
Q psy13160         73 ECSPNPCGPYTGCRV-VSGSAVCFCLPEYTGDPPSVPCTLPLNP-CHN--SPCGPNTQCSLLD-NGFAQCTCLPGYVE  145 (186)
Q Consensus        73 ~C~~~~c~~~~~C~~-~~~~~~C~c~~g~~~~~~~~~c~~~~~~-C~~--~~C~~~~~C~~~~-~~~~~C~C~~g~~~  145 (186)
                      .|....|...+.|.. ..+...|+|..+|.+...  .|. .++. |..  +-|..++.|..+. ... .|.|..+|+-
T Consensus        12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~--~Cv-~~Np~C~~nNGGCd~nAeC~~~~~~ki-~C~C~~~~~~   85 (105)
T 1n1i_A           12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGG--KCV-PASITCEENNGGCAPEAECTMDDKKEV-ECKCTKEGSE   85 (105)
T ss_dssp             SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSS--SEE-ECCCCTTSGGGGSCTTSEEEECTTSCE-EEECCSTTCC
T ss_pred             EecCCCCCCCCCeEECCCCCEeEEEECCeeccCC--EEE-ECCcchhhcCCCcCCCcEeEECCCCEE-EeECCCCCCc
Confidence            355556777889988 558889999999998755  787 4476 653  4599999999886 556 8999999753

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.65  E-value=0.00088  Score=35.73  Aligned_cols=34  Identities=26%  Similarity=0.455  Sum_probs=28.5

Q ss_pred             CeeeecCC-CeEeeCCCCCcCCCCCCCCcCCCCCCC
Q psy13160         83 TGCRVVSG-SAVCFCLPEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        83 ~~C~~~~~-~~~C~c~~g~~~~~~~~~c~~~~~~C~  117 (186)
                      ..|+++.+ +|.|.|.+||....+++.|. ++++|.
T Consensus        11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec~   45 (53)
T 2bz6_L           11 QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEYP   45 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSSC
T ss_pred             CEeEcCCCCCEEeeCCCCCEECCCCCccc-CCcccc
Confidence            37999998 79999999999877777887 888773

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.62  E-value=0.00072  Score=44.90  Aligned_cols=41  Identities=22%  Similarity=0.571  Sum_probs=33.6

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCC
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~  117 (186)
                      ++|...+|.+++.|.+..++|.|.|.+||.|.    .|+ .+++|.
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~----~Ce-~~~~c~  160 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGP----ECE-YVRDDD  160 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEEST----TSC-EECC--
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCCCcCc----ccc-cCcccC
Confidence            44667788888999999999999999999998    998 666775

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.59  E-value=0.00085  Score=35.79  Aligned_cols=31  Identities=23%  Similarity=0.491  Sum_probs=26.8

Q ss_pred             CCCCCCCCeee--ecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         76 PNPCGPYTGCR--VVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        76 ~~~c~~~~~C~--~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++||.++++|+  ...+.|.|.|.+||+|.    .|+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~----~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGE----RCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEEST----TSC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCC----CCC
Confidence            57899999998  45678999999999999    886

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.58  E-value=0.0012  Score=35.15  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=27.0

Q ss_pred             CeeeeCCC-CeeeeeCCCCCccCCCCCCCCccCCCCCC
Q psy13160        125 TQCSLLDN-GFAQCTCLPGYVESPNTIRGCVERRQPCE  161 (186)
Q Consensus       125 ~~C~~~~~-~~~~C~C~~g~~~~~~~~~~c~~~~~~C~  161 (186)
                      ..|+++.+ +| .|.|++||.... +++.| .++++|.
T Consensus        11 ~~C~n~~ggs~-~C~C~~Gy~L~~-Dg~tC-~d~dec~   45 (53)
T 2bz6_L           11 QYCSDHTGTKR-SCRCHEGYSLLA-DGVSC-TPTVEYP   45 (53)
T ss_dssp             SEEEEETTTEE-EEECCTTEEECT-TSSCE-EECSSSC
T ss_pred             CEeEcCCCCCE-EeeCCCCCEECC-CCCcc-cCCcccc
Confidence            36999998 68 999999998643 46788 4888883

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.57  E-value=0.001  Score=44.29  Aligned_cols=20  Identities=40%  Similarity=0.750  Sum_probs=13.9

Q ss_pred             CCCCCCeecc-C--CCeeE-ecCC
Q psy13160         21 PCDPYSSCSV-Y--SEHVA-MCDP   40 (186)
Q Consensus        21 ~C~~~~~C~~-~--~~~~C-~C~~   40 (186)
                      +|.+++.|.. .  +.++| .|+.
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~   25 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPT   25 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCT
T ss_pred             cCcCcCcccccCCCCCEEeCCCCC
Confidence            4777888987 5  56777 4655

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.48  E-value=0.0005  Score=49.72  Aligned_cols=43  Identities=23%  Similarity=0.617  Sum_probs=33.4

Q ss_pred             CCCCCC--CCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCC
Q psy13160         70 EGDECS--PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNP  115 (186)
Q Consensus        70 ~~~~C~--~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~  115 (186)
                      ++|||.  ..+|...+.|+|+.++|.|.|.+||.+++.  .|. ++++
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~--~C~-d~d~   48 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR--QCV-AEGS   48 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS--SEE-ETTC
T ss_pred             cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC--cCC-CCCC
Confidence            678886  467888899999999999999999997655  786 6654

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.36  E-value=0.003  Score=37.92  Aligned_cols=67  Identities=22%  Similarity=0.607  Sum_probs=50.2

Q ss_pred             CCCCCCCCCCeeeec-CCCeEeeCCCCCcCCCCCCCCcCCC--CCCCC--CCCCCCCeeeeCC-----CCeeeeeCCCCC
Q psy13160         74 CSPNPCGPYTGCRVV-SGSAVCFCLPEYTGDPPSVPCTLPL--NPCHN--SPCGPNTQCSLLD-----NGFAQCTCLPGY  143 (186)
Q Consensus        74 C~~~~c~~~~~C~~~-~~~~~C~c~~g~~~~~~~~~c~~~~--~~C~~--~~C~~~~~C~~~~-----~~~~~C~C~~g~  143 (186)
                      |....|...+.|.+. .+...|+|.+||.+...  .|. .+  ..|..  +-|..++.|....     +.. .|.|.+||
T Consensus         7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~--~Cv-~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki-~C~C~~g~   82 (99)
T 1ob1_C            7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGD--KCV-ENPNPTCNENNGGCDADAKCTEEDSGSNGKKI-TCECTKPD   82 (99)
T ss_dssp             CCSCCCCTTEEEECCTTSCCEEEECTTEEEETT--EEE-ECSCCCSTTGGGGCCTTEEEECCSCSSSSCCC-EEEECSTT
T ss_pred             eccCCCCCCCCeEEcCCCCEEEEecCCeecCCC--eEe-eCCCCChhhcCCCcCCCceeEecCCcccCCce-EeEeCCCC
Confidence            445567778889774 47889999999998654  676 33  46764  3588899998775     456 89999997


Q ss_pred             c
Q psy13160        144 V  144 (186)
Q Consensus       144 ~  144 (186)
                      .
T Consensus        83 ~   83 (99)
T 1ob1_C           83 S   83 (99)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.12  E-value=0.0029  Score=33.50  Aligned_cols=27  Identities=19%  Similarity=0.448  Sum_probs=22.2

Q ss_pred             CCCCCCCeeee----CCCCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCSL----LDNGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~~----~~~~~~~C~C~~g~~~~  146 (186)
                      +||.++++|++    ..++| .|.|++||+|.
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y-~C~C~~Gf~G~   44 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVY-SCECAIGFMGQ   44 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEE-EEECCTTEEST
T ss_pred             CcCCCCCEEecCccCCCCCE-EEECCCCCcCC
Confidence            47888899986    34578 99999999976

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.08  E-value=0.0046  Score=41.17  Aligned_cols=29  Identities=31%  Similarity=0.809  Sum_probs=20.4

Q ss_pred             CCCCCCeeeecC--CCeEe-eCCCCCcCCCCCCCCc
Q psy13160         78 PCGPYTGCRVVS--GSAVC-FCLPEYTGDPPSVPCT  110 (186)
Q Consensus        78 ~c~~~~~C~~~~--~~~~C-~c~~g~~~~~~~~~c~  110 (186)
                      ||.+++.|+...  +.+.| .|.++|.|.    .|+
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~----~Ce   33 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGK----RCE   33 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEEST----TSC
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCC----CCc
Confidence            456677887654  46788 688888877    664

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.61  E-value=0.0056  Score=48.79  Aligned_cols=37  Identities=32%  Similarity=0.790  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCCCeeee-CCCCeeeeeCC-CCCccCCCCCCCCcc
Q psy13160        113 LNPCHNSPCGPNTQCSL-LDNGFAQCTCL-PGYVESPNTIRGCVE  155 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~-~~~~~~~C~C~-~g~~~~~~~~~~c~~  155 (186)
                      +++|.++||.++++|.+ ..++| .|.|. +||+|.     .|+.
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y-~C~C~~~G~~G~-----~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRY-QCDCTRTGYSGP-----NCTI   40 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEE-EEECTTSSEETT-----TTCE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCce-EeeCCCCCcCCC-----CCCC
Confidence            46788899999999999 88899 99999 999976     7854

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=95.59  E-value=0.018  Score=31.31  Aligned_cols=42  Identities=26%  Similarity=0.540  Sum_probs=29.1

Q ss_pred             CeeeeCC-CCeeeeeCCCCCccCCCCCCCCccCCCCCCCCCCCCCCeecCC
Q psy13160        125 TQCSLLD-NGFAQCTCLPGYVESPNTIRGCVERRQPCEPNVCGAGAVCDPN  174 (186)
Q Consensus       125 ~~C~~~~-~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~  174 (186)
                      ..|+++. ++| .|.|++||.... +++.|. ++++   .+|..  .|+|.
T Consensus        11 ~~C~n~~~gs~-~C~C~~Gy~L~~-D~~tC~-d~~~---~pC~~--~c~n~   53 (59)
T 2wph_E           11 QFCKNSADNKV-VCSCTEGYRLAE-NQKSCE-PAVP---FPCGR--VSVSQ   53 (59)
T ss_dssp             SEEEECSTTCE-EEECCTTEEECT-TSSCEE-ESSS---SCTTC--CCSCC
T ss_pred             CEeEeCCCCCE-EeeCCCCcEECC-CCCccc-CCCC---CCCCC--ccccc
Confidence            3799998 599 999999998643 466774 5543   45643  56654

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.53  E-value=0.011  Score=45.23  Aligned_cols=42  Identities=24%  Similarity=0.498  Sum_probs=0.0

Q ss_pred             CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCCCCCCCCCCCeeeeCCC
Q psy13160         77 NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPCHNSPCGPNTQCSLLDN  132 (186)
Q Consensus        77 ~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~~  132 (186)
                      .+|.+++.|....   .|.|++||.|.    .|+       .-.|.+++.|....|
T Consensus       371 ~~C~ngg~C~~~~---~C~C~~G~~G~----~Ce-------~c~C~~~g~C~~~~G  412 (426)
T 3zyj_B          371 LHCQNGGTCHNNV---RCLCPAAYTGI----LCE-------KLRCEEAGSCGSDSG  412 (426)
T ss_dssp             --------------------------------------------------------
T ss_pred             ccCCCCCCcCCCC---CCcCCCCCcCC----CCc-------CCCCCCCCcccCCCC
Confidence            4677777887554   78999999998    674       124555666765554

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.50  E-value=0.0027  Score=42.50  Aligned_cols=49  Identities=24%  Similarity=0.458  Sum_probs=35.4

Q ss_pred             CCCCCCCccCCCCCCCCCC-----CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         60 SDCPFNMAFPEGDECSPNP-----CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        60 ~g~~~~~c~~~~~~C~~~~-----c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      .||.+.....++++|...+     |.+  .|.++.++|.|.|.+||.+..+++.|.
T Consensus       113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~  166 (170)
T 1szb_A          113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCS  166 (170)
T ss_dssp             CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCccc
Confidence            5666555444678887543     654  799999999999999998665544664

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.42  E-value=0.0089  Score=47.63  Aligned_cols=36  Identities=28%  Similarity=0.540  Sum_probs=32.7

Q ss_pred             CCCCCCCCCCCCCeeee-cCCCeEeeCC-CCCcCCCCCCCCc
Q psy13160         71 GDECSPNPCGPYTGCRV-VSGSAVCFCL-PEYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~~~c~~~~~C~~-~~~~~~C~c~-~g~~~~~~~~~c~  110 (186)
                      +++|.++||.+++.|.+ ..+.|.|.|. +||.|.    .|+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~----~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP----NCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT----TTC
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCC----CCC
Confidence            46788999999999999 7789999999 999999    886

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.28  E-value=0.01  Score=47.50  Aligned_cols=37  Identities=27%  Similarity=0.818  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCCeeee-CCCCeeeeeCC-CCCccCCCCCCCCcc
Q psy13160        113 LNPCHNSPCGPNTQCSL-LDNGFAQCTCL-PGYVESPNTIRGCVE  155 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~-~~~~~~~C~C~-~g~~~~~~~~~~c~~  155 (186)
                      +++|.++||.++++|++ ..++| .|.|+ +||+|.     .|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y-~C~C~~~G~~G~-----~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQY-KCDCTRTGFYGE-----NCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEE-EEECTTSSEETT-----TTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCe-EEecCCCCccCC-----CCCC
Confidence            46788999999999996 44789 99999 999875     7753

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.25  E-value=0.0082  Score=32.54  Aligned_cols=29  Identities=21%  Similarity=0.553  Sum_probs=23.4

Q ss_pred             CCCCCCeeee----CCCCeeeeeCCCCCccCCCCCCCCc
Q psy13160        120 PCGPNTQCSL----LDNGFAQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       120 ~C~~~~~C~~----~~~~~~~C~C~~g~~~~~~~~~~c~  154 (186)
                      +|.++++|+.    ....| .|.|++||+|.     .|+
T Consensus        15 pC~NGGtC~~~~~~~~~~~-~C~C~~Gf~G~-----~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVY-SCECAIGFMGQ-----RCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEE-EEEECTTEESS-----SSC
T ss_pred             cCCCCCEEeCCccCCCCCE-EeECCCCCccC-----CCc
Confidence            7999999983    34567 89999999976     775

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=95.18  E-value=0.042  Score=34.61  Aligned_cols=37  Identities=16%  Similarity=0.426  Sum_probs=27.3

Q ss_pred             CCCCCCeeeeCC--CCeeeeeCCCCCccCCCCCCCCccCCC-CCC
Q psy13160        120 PCGPNTQCSLLD--NGFAQCTCLPGYVESPNTIRGCVERRQ-PCE  161 (186)
Q Consensus       120 ~C~~~~~C~~~~--~~~~~C~C~~g~~~~~~~~~~c~~~~~-~C~  161 (186)
                      ||.++++|++..  .+++.|.|++||+|.     .|+++++ +|.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~-----~Ce~~~~~~C~   41 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ-----HCEIDKSKTCY   41 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEEST-----TSCEESSCCSB
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCc-----cccccCcCCCc
Confidence            688889998874  444389999999876     7866554 454

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.13  E-value=0.017  Score=46.26  Aligned_cols=36  Identities=28%  Similarity=0.673  Sum_probs=31.4

Q ss_pred             CCCCCCCCCCCCCeeee-cCCCeEeeCC-CCCcCCCCCCCCc
Q psy13160         71 GDECSPNPCGPYTGCRV-VSGSAVCFCL-PEYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~~~c~~~~~C~~-~~~~~~C~c~-~g~~~~~~~~~c~  110 (186)
                      +++|.++||.+++.|.. ..+.|.|.|. +||.|.    .|+
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~----~Ce   38 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE----NCT   38 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT----TTC
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCC----CCC
Confidence            36788999999999995 4478999999 999998    886

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=94.84  E-value=0.012  Score=31.93  Aligned_cols=29  Identities=21%  Similarity=0.393  Sum_probs=24.4

Q ss_pred             CCCCCCeeee----cCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         78 PCGPYTGCRV----VSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        78 ~c~~~~~C~~----~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +|.++++|+.    ....|.|.|.+||.|.    .|+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~----~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ----RCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESS----SSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccC----CCc
Confidence            7999999984    2356899999999999    886

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=94.74  E-value=0.019  Score=31.14  Aligned_cols=31  Identities=23%  Similarity=0.479  Sum_probs=25.3

Q ss_pred             CeeeecC-CCeEeeCCCCCcCCCCCCCCcCCCC
Q psy13160         83 TGCRVVS-GSAVCFCLPEYTGDPPSVPCTLPLN  114 (186)
Q Consensus        83 ~~C~~~~-~~~~C~c~~g~~~~~~~~~c~~~~~  114 (186)
                      ..|+++. ++|.|.|.+||...++++.|. +++
T Consensus        11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~-d~~   42 (59)
T 2wph_E           11 QFCKNSADNKVVCSCTEGYRLAENQKSCE-PAV   42 (59)
T ss_dssp             SEEEECSTTCEEEECCTTEEECTTSSCEE-ESS
T ss_pred             CEeEeCCCCCEEeeCCCCcEECCCCCccc-CCC
Confidence            3799988 699999999999877777886 543

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.44  E-value=0.074  Score=33.47  Aligned_cols=32  Identities=19%  Similarity=0.455  Sum_probs=25.5

Q ss_pred             CCCCCCeeeecC--CCe-EeeCCCCCcCCCCCCCCcCCC
Q psy13160         78 PCGPYTGCRVVS--GSA-VCFCLPEYTGDPPSVPCTLPL  113 (186)
Q Consensus        78 ~c~~~~~C~~~~--~~~-~C~c~~g~~~~~~~~~c~~~~  113 (186)
                      ||.+++.|++..  ..+ .|.|.++|.|.    .|+.++
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~----~Ce~~~   36 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ----HCEIDK   36 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEEST----TSCEES
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCc----cccccC
Confidence            688899998764  445 99999999998    886444

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=94.04  E-value=0.043  Score=42.09  Aligned_cols=21  Identities=29%  Similarity=0.438  Sum_probs=13.7

Q ss_pred             CeeeecCCCeEeeCCCCCcCC
Q psy13160         83 TGCRVVSGSAVCFCLPEYTGD  103 (186)
Q Consensus        83 ~~C~~~~~~~~C~c~~g~~~~  103 (186)
                      ..|....+.+.|.|..++.|.
T Consensus       304 s~C~~~~g~~~C~C~~~ttG~  324 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTGP  324 (426)
T ss_dssp             SCEEEETTEEEECCCTTEESS
T ss_pred             hhcCCCCCCceeeCCCCCcCC
Confidence            457666566777777666655

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=93.98  E-value=0.012  Score=39.26  Aligned_cols=38  Identities=34%  Similarity=0.871  Sum_probs=28.4

Q ss_pred             CCCCCCCCC-----CCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        112 PLNPCHNSP-----CGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       112 ~~~~C~~~~-----C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      ++++|...+     |.+  .|.++.++| .|.|++||.+.. +++.|
T Consensus       123 di~eC~~~~~~~~~C~~--~C~n~~g~~-~C~C~~Gy~l~~-d~~~C  165 (170)
T 1szb_A          123 DIDECQVAPGEAPTCDH--HCHNHLGGF-YCSCRAGYVLHR-NKRTC  165 (170)
T ss_dssp             ECCTTCCCTTSCCSSSS--EEEEETTEE-EEECCTTEEECT-TSSCE
T ss_pred             ccCcccCCCCCCCccCC--ccccCCCCE-EEeCCCCcEECC-CCCcc
Confidence            678887533     654  799999999 999999998643 24455

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=93.78  E-value=0.019  Score=37.63  Aligned_cols=37  Identities=27%  Similarity=0.759  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCcc
Q psy13160        113 LNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVE  155 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~  155 (186)
                      ..+|.+.+|..++.|.+....| .|.|.+||.|.     .|+.
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~-~c~C~~g~~g~-----~Ce~  155 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNY-TCKCDPGFSGL-----KCEQ  155 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEE-EEEECTTEEST-----TSCE
T ss_pred             cCCCCCCCCCCCCEeecCCCCe-eEECCCCccCc-----cccc
Confidence            3556667888889999999999 99999999976     7754

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=91.85  E-value=0.054  Score=35.40  Aligned_cols=35  Identities=23%  Similarity=0.632  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      .+|.+.||.+.+.|.+....|.|.|.+||.|.    .|+
T Consensus       120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~----~Ce  154 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETINNYTCKCDPGFSGL----KCE  154 (157)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEEST----TSC
T ss_pred             CCCCCCCCCCCCEeecCCCCeeEECCCCccCc----ccc
Confidence            34556778888999999999999999999999    885

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.82  E-value=0.11  Score=29.88  Aligned_cols=27  Identities=26%  Similarity=0.586  Sum_probs=20.0

Q ss_pred             CCCCCCCCeeee--CCCCeeeeeCCCCCccC
Q psy13160        118 NSPCGPNTQCSL--LDNGFAQCTCLPGYVES  146 (186)
Q Consensus       118 ~~~C~~~~~C~~--~~~~~~~C~C~~g~~~~  146 (186)
                      .+.|.++ +|+.  ..+.+ .|.|.+||+|.
T Consensus        45 ~~yClnG-~C~~i~~~~~~-~C~C~~GYtG~   73 (79)
T 1xdt_R           45 KDFCIHG-ECKYVKELRAP-SCICHPGYHGE   73 (79)
T ss_dssp             TTCCSSE-EECCBGGGTBC-CEEECTTEEST
T ss_pred             cCcCCCC-EeeeecCCCCe-EEEcCCCcccc
Confidence            4678875 8843  33466 89999999986

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=90.23  E-value=0.35  Score=25.10  Aligned_cols=26  Identities=31%  Similarity=0.752  Sum_probs=19.8

Q ss_pred             CCCCCCCeeeeC--CCCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCSLL--DNGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~~~--~~~~~~C~C~~g~~~~  146 (186)
                      +.|.++ +|...  .+.+ .|.|++||+|.
T Consensus        14 ~yC~nG-~C~~~~~~~~~-~C~C~~gy~G~   41 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKP-ACVCHSGYVGA   41 (50)
T ss_pred             CcccCC-EEeeccCCCCe-EEECCCCCccc
Confidence            567765 88753  3567 99999999986

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=89.95  E-value=0.38  Score=36.67  Aligned_cols=41  Identities=17%  Similarity=0.380  Sum_probs=33.5

Q ss_pred             CccCCCCCCCCCCCCCCCeeeecCCCeEeeCCC-CCcCCCCCCCCc
Q psy13160         66 MAFPEGDECSPNPCGPYTGCRVVSGSAVCFCLP-EYTGDPPSVPCT  110 (186)
Q Consensus        66 ~c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~~-g~~~~~~~~~c~  110 (186)
                      .|....+.|...||.+++.|+.....|.|.|.. +|.|.    .|+
T Consensus       180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~----~C~  221 (410)
T 3asi_A          180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP----LCN  221 (410)
T ss_dssp             SCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEEST----TSC
T ss_pred             CCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCC----CCC
Confidence            353344678889999999999988899999996 89888    775

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=89.69  E-value=0.26  Score=25.61  Aligned_cols=26  Identities=23%  Similarity=0.646  Sum_probs=19.4

Q ss_pred             CCCCCCCeee--eCCCCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCS--LLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~--~~~~~~~~C~C~~g~~~~  146 (186)
                      +.|.+ ++|.  ...+.+ .|+|++||+|.
T Consensus        14 ~yC~n-G~C~~~~~~~~~-~C~C~~gy~G~   41 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTP-SCVCDEGYIGA   41 (50)
T ss_dssp             TSCTT-CCEEEETTTTEE-EECCCTTEETT
T ss_pred             CcccC-CEEEeEcCCCCe-EEECCCCcccC
Confidence            56777 6785  344456 89999999987

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=89.55  E-value=0.46  Score=36.24  Aligned_cols=37  Identities=24%  Similarity=0.688  Sum_probs=30.4

Q ss_pred             CcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCC-CCccC
Q psy13160        109 CTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLP-GYVES  146 (186)
Q Consensus       109 c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~-g~~~~  146 (186)
                      |....+.|...||.+++.|.....+| .|.|+. +|.|.
T Consensus       181 C~~~~~~C~~~pC~n~g~C~~~~~~~-~C~C~~~~~~G~  218 (410)
T 3asi_A          181 CEGPSTTCQEDSCSNQGVCLQQWDGF-SCDCSMTSFSGP  218 (410)
T ss_dssp             CCCCSSCCCTTSSSTTCEEEECSSSE-EEECTTTSEEST
T ss_pred             CCCCCCCcccccCCCCCEecCCCCCc-eEeccCCcccCC
Confidence            43234678889999999999999999 999996 88765

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=89.43  E-value=0.11  Score=34.11  Aligned_cols=49  Identities=24%  Similarity=0.489  Sum_probs=32.7

Q ss_pred             CCCCCCCccCCCCCCCC---CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         60 SDCPFNMAFPEGDECSP---NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        60 ~g~~~~~c~~~~~~C~~---~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      .||.......++++|..   .+|.  ..|.+..+++.|.|.+||.+..+++.|.
T Consensus       106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence            35553333336678864   2454  4799999999999999998664444553

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=89.31  E-value=0.17  Score=29.11  Aligned_cols=34  Identities=32%  Similarity=0.807  Sum_probs=24.5

Q ss_pred             CCCC---CCCCCCCCeeeec--CCCeEeeCCCCCcCCCCCCCCc
Q psy13160         72 DECS---PNPCGPYTGCRVV--SGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~---~~~c~~~~~C~~~--~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++|.   .+.|.++ .|+..  .+.+.|.|.+||.|.    .|+
T Consensus        38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~----RCE   76 (79)
T 1xdt_R           38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGE----RCH   76 (79)
T ss_dssp             -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEEST----TCC
T ss_pred             CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccc----ccc
Confidence            4454   4678775 89533  357889999999999    885

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=89.25  E-value=0.17  Score=36.55  Aligned_cols=43  Identities=28%  Similarity=0.622  Sum_probs=29.7

Q ss_pred             CCCCCCC---CCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCC
Q psy13160         71 GDECSPN---PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPC  116 (186)
Q Consensus        71 ~~~C~~~---~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C  116 (186)
                      .|||...   .|.  ..|.++.++|.|.|..||....++..|. ..++|
T Consensus         2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~d~~sC~-p~~~c   47 (283)
T 3f1s_B            2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLGEDHKQCV-PHDQC   47 (283)
T ss_dssp             -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEECTTSSCEE-ECSTT
T ss_pred             CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccCCCCCccc-ccccc
Confidence            4567533   344  4788888999999999998766656776 55544

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=88.33  E-value=0.64  Score=24.12  Aligned_cols=30  Identities=27%  Similarity=0.669  Sum_probs=23.4

Q ss_pred             CCCCCCCCeeeecC--CCeEeeCCCCCcCCCCCCCCc
Q psy13160         76 PNPCGPYTGCRVVS--GSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        76 ~~~c~~~~~C~~~~--~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ...|.++ +|....  ..+.|.|.+||.|.    .|+
T Consensus        13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~----RCe   44 (50)
T 3e50_C           13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGA----RCE   44 (50)
T ss_pred             cCcccCC-EEeeccCCCCeEEECCCCCccc----CCC
Confidence            3567775 887533  57899999999999    886

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=87.26  E-value=0.65  Score=30.09  Aligned_cols=34  Identities=15%  Similarity=0.377  Sum_probs=25.2

Q ss_pred             CCCCCCeeeeCC--CCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        120 PCGPNTQCSLLD--NGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       120 ~C~~~~~C~~~~--~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      +|.++++|+...  ..+.+|.|++||.|.     .|+++++
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~-----~Cei~~~   49 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ-----HCEIDKS   49 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEEST-----TSCEESS
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCC-----ceecccc
Confidence            799999997652  344379999999876     7765554

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=86.80  E-value=0.22  Score=37.14  Aligned_cols=37  Identities=30%  Similarity=0.799  Sum_probs=22.1

Q ss_pred             CCCC-CCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         72 DECS-PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~-~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +||. ...|.+  .|.++.++|.|.|.+||...++++.|.
T Consensus         2 ~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~~d~~~C~   39 (349)
T 3v64_C            2 NECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCK   39 (349)
T ss_dssp             -------CCSS--EECCC---CCEECCTTEEECTTSSCEE
T ss_pred             cccCCCCCCcC--eeecCCCCeEEECCCCccCCCCCCccc
Confidence            4564 234554  899999999999999998776666775

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=86.64  E-value=0.91  Score=23.51  Aligned_cols=29  Identities=31%  Similarity=0.682  Sum_probs=22.2

Q ss_pred             CCCCCCCeeee--cCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         77 NPCGPYTGCRV--VSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        77 ~~c~~~~~C~~--~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +.|.+ ++|..  ..+.+.|.|..+|.|.    .|+
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~----RCe   48 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGE----RCG   48 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSS----SCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccc----ccc
Confidence            46776 48973  3356899999999999    875

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=86.44  E-value=1.4  Score=25.94  Aligned_cols=66  Identities=23%  Similarity=0.468  Sum_probs=44.8

Q ss_pred             CCCCCCCCCCeeeeCCC-CeeeeeCCCCCccCCCCCCCCccC-CCCCCC--CCCCCCCeecCC--CCCeeeCCCCC
Q psy13160        116 CHNSPCGPNTQCSLLDN-GFAQCTCLPGYVESPNTIRGCVER-RQPCEP--NVCGAGAVCDPN--RAPYCFCPEGT  185 (186)
Q Consensus       116 C~~~~C~~~~~C~~~~~-~~~~C~C~~g~~~~~~~~~~c~~~-~~~C~~--~~C~~~~~C~~~--~~~~C~C~~g~  185 (186)
                      |....|+.++.|.+... .- .|+|..+|.-.   +..|-.+ ...|..  .-|..++.|...  ..-.|.|...+
T Consensus         7 C~~tkcp~NA~Cyr~~dg~E-ecRCllnykk~---~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~   78 (95)
T 1b9w_A            7 CIDTNVPENAACYRYLDGTE-EWRCLLYFKED---AGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG   78 (95)
T ss_dssp             CSSCCCCTTEEEEECTTSCE-EEEECTTEEEE---TTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             cccCCCCCCcCeEEEcCCCE-EEEEECCeEec---CCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence            44446777888988654 45 89999999754   3456322 125654  348889999855  35789998764

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=85.82  E-value=0.55  Score=33.87  Aligned_cols=43  Identities=28%  Similarity=0.723  Sum_probs=29.3

Q ss_pred             CCCCCC---CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCC
Q psy13160        113 LNPCHN---SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPC  160 (186)
Q Consensus       113 ~~~C~~---~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C  160 (186)
                      .|||..   ..|.  ..|.++.++| .|.|.+||.... +++.|. +.++|
T Consensus         2 ~~eC~~~~~~~C~--~~C~~~~~~~-~C~C~~G~~l~~-d~~sC~-p~~~c   47 (283)
T 3f1s_B            2 KNECHPERTDGCQ--HFCLPGQESY-TCSCAQGYRLGE-DHKQCV-PHDQC   47 (283)
T ss_dssp             -CCCCSSCSSSCS--SBCCCCTTSC-CCBCCTTEEECT-TSSCEE-ECSTT
T ss_pred             CCccCCCCCCCCC--CEeeCCCCCe-EecCCCCcccCC-CCCccc-ccccc
Confidence            356653   3454  4699999999 999999997643 355673 55655

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=85.35  E-value=0.73  Score=40.49  Aligned_cols=38  Identities=21%  Similarity=0.622  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeeeeeCC-CCCccCCCCCCCCccC
Q psy13160        113 LNPCHNSPCGPNTQCSLLDNGFAQCTCL-PGYVESPNTIRGCVER  156 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~~~~~~~~C~C~-~g~~~~~~~~~~c~~~  156 (186)
                      .+.|...||.++++|.....+| .|.|+ ++|.|.     .|+.+
T Consensus      1017 ~~~C~~~pC~ngG~C~~~~~~~-~C~C~~~g~~G~-----~C~~~ 1055 (1245)
T 3qcw_A         1017 STTCQEDSCSNQGVCLQQWDGF-SCDCSMTSFSGP-----LCNDP 1055 (1245)
T ss_dssp             CCCCCTTSSSSSCEEEEETTEE-EEECTTSSCBST-----TSCBC
T ss_pred             cCceECCcCCCCCEeCCCCCCC-EEECCCCCCCCC-----CccCC
Confidence            4678888999999999999999 99999 699875     67543

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=84.91  E-value=0.94  Score=39.81  Aligned_cols=40  Identities=18%  Similarity=0.439  Sum_probs=33.9

Q ss_pred             ccCCCCCCCCCCCCCCCeeeecCCCeEeeCC-CCCcCCCCCCCCc
Q psy13160         67 AFPEGDECSPNPCGPYTGCRVVSGSAVCFCL-PEYTGDPPSVPCT  110 (186)
Q Consensus        67 c~~~~~~C~~~~c~~~~~C~~~~~~~~C~c~-~g~~~~~~~~~c~  110 (186)
                      |....+.|..+||.+++.|......|.|.|. ++|.|.    .|.
T Consensus      1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~----~C~ 1053 (1245)
T 3qcw_A         1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP----LCN 1053 (1245)
T ss_dssp             SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBST----TSC
T ss_pred             eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCC----Ccc
Confidence            5434467888999999999988889999999 699998    886

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=83.06  E-value=0.59  Score=34.76  Aligned_cols=37  Identities=35%  Similarity=0.819  Sum_probs=20.9

Q ss_pred             CCCC-CCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCc
Q psy13160        114 NPCH-NSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       114 ~~C~-~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~  154 (186)
                      +||. ...|.  ..|.++.++| .|.|++||...+ +++.|.
T Consensus         2 ~ec~~~~~C~--~~C~n~~g~~-~C~C~~g~~l~~-d~~~C~   39 (349)
T 3v64_C            2 NECAEEGYCS--QGCTNSEGAF-QCWCEAGYELRP-DRRSCK   39 (349)
T ss_dssp             -------CCS--SEECCC---C-CEECCTTEEECT-TSSCEE
T ss_pred             cccCCCCCCc--CeeecCCCCe-EEECCCCccCCC-CCCccc
Confidence            5565 23465  3799999999 999999998643 355673

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=82.36  E-value=1.4  Score=29.69  Aligned_cols=30  Identities=30%  Similarity=0.770  Sum_probs=24.4

Q ss_pred             CCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         73 ECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        73 ~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      .| ..+|.+++.|+.   ...|.|++||.|.    .|+
T Consensus       150 ~C-~~~C~ngG~Cv~---P~~C~C~~Gw~G~----~C~  179 (188)
T 2ygo_A          150 EC-PGGCRNGGFCNE---RRICECPDGFHGP----HCE  179 (188)
T ss_dssp             CC-TTCCCTTCEECT---TSCEECCTTCBTT----TTC
T ss_pred             cc-CCCCCCCCEeCC---CCcccCcCCCCCC----CCc
Confidence            36 467999999963   4489999999999    886

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=82.36  E-value=1.3  Score=28.73  Aligned_cols=38  Identities=29%  Similarity=0.892  Sum_probs=27.6

Q ss_pred             CCCCCCC---CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        112 PLNPCHN---SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       112 ~~~~C~~---~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      ++++|..   .+|.  ..|.++.+++ .|.|.+||.+.. +++.|
T Consensus       116 d~~eC~~~~~~~C~--~~C~n~~g~~-~C~C~~Gy~l~~-~~~~C  156 (159)
T 1nzi_A          116 DINECTDFVDVPCS--HFCNNFIGGY-FCSCPPEYFLHD-DMKNC  156 (159)
T ss_dssp             ECCTTTC-CCCCSS--SEEEEETTEE-EEECCTTCEECT-TSSCE
T ss_pred             cCcccCCCCCCCCC--CcccCcCCCE-EEecCCCcEECC-CCCcc
Confidence            5678864   2464  4799999999 999999998643 24445

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=81.81  E-value=1.2  Score=30.00  Aligned_cols=31  Identities=23%  Similarity=0.585  Sum_probs=23.6

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCc
Q psy13160        114 NPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~  154 (186)
                      ..|. .+|.++|.|+.-   . .|.|++||.|.     .|+
T Consensus       149 ~~C~-~~C~ngG~Cv~P---~-~C~C~~Gw~G~-----~C~  179 (188)
T 2ygo_A          149 AECP-GGCRNGGFCNER---R-ICECPDGFHGP-----HCE  179 (188)
T ss_dssp             CCCT-TCCCTTCEECTT---S-CEECCTTCBTT-----TTC
T ss_pred             CccC-CCCCCCCEeCCC---C-cccCcCCCCCC-----CCc
Confidence            3464 579999999653   2 89999999876     775

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=80.60  E-value=1.6  Score=28.24  Aligned_cols=32  Identities=19%  Similarity=0.455  Sum_probs=25.1

Q ss_pred             CCCCCCeeeecC--CCe-EeeCCCCCcCCCCCCCCcCCC
Q psy13160         78 PCGPYTGCRVVS--GSA-VCFCLPEYTGDPPSVPCTLPL  113 (186)
Q Consensus        78 ~c~~~~~C~~~~--~~~-~C~c~~g~~~~~~~~~c~~~~  113 (186)
                      ||.+++.|+...  ..+ .|.|.+||.|.    .|+.++
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~----~Cei~~   48 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ----HCEIDK   48 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEEST----TSCEES
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCC----ceeccc
Confidence            799999997652  345 89999999998    886443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	186
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.88
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.77
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.75
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.7
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.66
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.64
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.62
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.62
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.58
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.57
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.52
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.48
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.48
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.42
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.36
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.33
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.33
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.3
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.25
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.25
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.2
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.2
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.14
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.12
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.11
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.1
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.0
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.97
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.95
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.94
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.92
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.91
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.91
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.9
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.85
d1nt0a3	45	Mannose-binding protein associated serine protease	97.8
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.79
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.74
d1szba2	45	Mannose-binding protein associated serine protease	97.74
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.74
d1nt0a3	45	Mannose-binding protein associated serine protease	97.7
d1szba2	45	Mannose-binding protein associated serine protease	97.62
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.6
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.39
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.38
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.33
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.19
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.09
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.04
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.0
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	96.9
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.84
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.67
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.92
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	95.7
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	95.54
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	95.49
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	95.47
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	95.37
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	95.32
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	94.96
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	93.65
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	93.37
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	92.71
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	92.03
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	91.97
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	91.38
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	90.58
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	89.89
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	85.77
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	83.16

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=1.5e-09  Score=53.29  Aligned_cols=37  Identities=22%  Similarity=0.267  Sum_probs=32.2

Q ss_pred             CCCCCCCCCCCCCCCeecc-CCCeeEecCCCCCCCCCCCCCCcceeeCCCCCCCCCcc
Q psy13160         12 NDSLACKPNPCDPYSSCSV-YSEHVAMCDPCSGPQAPWLPHCRPECLCNSDCPFNMAF   68 (186)
Q Consensus        12 ~~~~~c~~~~C~~~~~C~~-~~~~~C~C~~c~~~~~~C~~~C~~~C~C~~g~~~~~c~   68 (186)
                      +|+|+|.++||.+++.|++ .++|.|.|                    .+||.|+.|+
T Consensus         1 id~d~C~~~PC~ngg~C~~~~~~y~C~C--------------------~~g~~G~~Ce   38 (39)
T d1edmb_           1 VDGDQCESNPCLNGGSCKDDINSYECWC--------------------PFGFEGKNCE   38 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEEETTEEEEEC--------------------CTTCCSTTSC
T ss_pred             CccccCCCCCCCCCcEEEcCCCCEEEEC--------------------CCCCCCCCCC
Confidence            4889999999999999999 99888765                    4599999885

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=4.6e-09  Score=51.38  Aligned_cols=36  Identities=36%  Similarity=0.901  Sum_probs=32.8

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCc
Q psy13160        113 LNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~  154 (186)
                      ||+|.++||.++++|++..++| .|.|++||+|.     .|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y-~C~C~~G~~G~-----~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEF-QCICMPGYEGV-----HCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCE-EEECCTTEESS-----SSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCE-EEeCCCCCccC-----cCe
Confidence            5789999999999999999999 99999999976     775

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=5.2e-09  Score=52.33  Aligned_cols=34  Identities=29%  Similarity=0.820  Sum_probs=30.9

Q ss_pred             CCCCCC--CCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        112 PLNPCH--NSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       112 ~~~~C~--~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      +|++|.  ++||.++++|+++.++| +|.|++||+|.
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y-~C~C~~G~~G~   37 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSF-ECQCLQGYTGP   37 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSE-EEECCTTEEST
T ss_pred             CCccccCCCCCCCCCcEeECCCCCE-EeECCCCCcCC
Confidence            688887  57999999999999999 99999999875

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.6e-08  Score=49.45  Aligned_cols=37  Identities=32%  Similarity=0.794  Sum_probs=34.4

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++|+|.++||.++++|++..+.|.|.|.+||.|.    .|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~----~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK----NCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST----TSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCC----CCC
Confidence            6789999999999999999999999999999998    774

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.66  E-value=6.1e-09  Score=50.38  Aligned_cols=34  Identities=26%  Similarity=0.675  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        112 PLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       112 ~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      ++|+|.++||.++++|++..++| .|.|++||+|.
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y-~C~C~~g~~G~   34 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSY-ICFCLPAFEGR   34 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEE-EEECCTTEEST
T ss_pred             CcccCCCCCCCCCCEEECCCCCe-EEECCCCCcCC
Confidence            47889999999999999999999 99999999875

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=2.2e-08  Score=48.92  Aligned_cols=36  Identities=36%  Similarity=0.856  Sum_probs=33.4

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         71 GDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ||+|.++||.+++.|++..++|.|.|.+||.|.    .|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~----~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGV----HCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESS----SSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccC----cCe
Confidence            578999999999999999999999999999999    885

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.62  E-value=1.2e-08  Score=49.24  Aligned_cols=34  Identities=38%  Similarity=1.026  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCC
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGD  103 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~  103 (186)
                      ++|+|.++||.++++|++..+.|.|.|.+||.|.
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   34 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR   34 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCcCC
Confidence            4688999999999999999999999999999998

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=2.8e-08  Score=49.56  Aligned_cols=37  Identities=46%  Similarity=0.881  Sum_probs=33.4

Q ss_pred             CCCCCC--CCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         70 EGDECS--PNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        70 ~~~~C~--~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ++++|.  ++||.++++|+++.++|.|.|++||.|.    .|+
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~----~Ce   40 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP----RCE   40 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST----TSC
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC----CCc
Confidence            678886  5789999999999999999999999998    885

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=2.2e-08  Score=48.91  Aligned_cols=36  Identities=31%  Similarity=0.779  Sum_probs=32.0

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCcc
Q psy13160        114 NPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVE  155 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~  155 (186)
                      |+|.++||.++++|++..++| .|.|++||+|.     .|++
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y-~C~C~~G~~G~-----~Cei   36 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEY-TCTCLEGFEGK-----NCEL   36 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSC-CEECCTTEETT-----TTCE
T ss_pred             CcCCCCCCCCCcEEECCCCCE-EEECCCCCCcC-----cCeE
Confidence            578889999999999999999 99999999876     7753

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.2e-08  Score=51.04  Aligned_cols=32  Identities=19%  Similarity=0.341  Sum_probs=27.4

Q ss_pred             cCCCCCCCCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        155 ERRQPCEPNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       155 ~~~~~C~~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +|||||+...+..++.|+|+ |+|.|.|++||+
T Consensus         3 vDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~   35 (43)
T d1emoa1           3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYI   35 (43)
T ss_dssp             CCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEE
T ss_pred             cceeccCCcCCCCCCEeECCCCCeEeECCCCcc
Confidence            58999986666567899999 999999999984

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=7.9e-08  Score=45.76  Aligned_cols=32  Identities=38%  Similarity=0.801  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        114 NPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      |+|.++||.++++|++..++| +|.|++||.|.
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y-~C~C~~g~~G~   32 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEF-QCECPTGFTGH   32 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCE-EEECCTTEESS
T ss_pred             CCCCCCCCCCCcEEECCCCCe-EEECCCCCCCC
Confidence            568889999999999999999 99999999875

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.3e-08  Score=49.00  Aligned_cols=36  Identities=22%  Similarity=0.624  Sum_probs=30.8

Q ss_pred             CcCCCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        109 CTLPLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       109 c~~~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      |. +||||...++..++.|+|+.|+| .|.|++||.+.
T Consensus         2 Cv-DidEC~~~~~~~~~~C~Nt~Gsy-~C~C~~Gy~~~   37 (43)
T d1emoa1           2 AV-DMDECKEPDVCKHGQCINTDGSY-RCECPFGYILA   37 (43)
T ss_dssp             CC-CCCSSSSTTSCSSSCCCCCSSCC-CCCCCTTEEES
T ss_pred             Cc-ceeccCCcCCCCCCEeECCCCCe-EeECCCCcccC
Confidence            44 89999876666678999999999 99999999875

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1e-07  Score=45.36  Aligned_cols=32  Identities=31%  Similarity=0.653  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCC
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGD  103 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~  103 (186)
                      |+|.++||.++++|++...+|.|.|.++|.|.
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   32 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGH   32 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCC
Confidence            57889999999999999899999999999998

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=9.1e-08  Score=46.63  Aligned_cols=35  Identities=31%  Similarity=0.847  Sum_probs=32.3

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      |+|.++||.++++|++..+.|.|.|.+||.|.    .|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~----~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK----NCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETT----TTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcC----cCe
Confidence            57889999999999998899999999999999    885

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=4.7e-08  Score=47.74  Aligned_cols=36  Identities=28%  Similarity=0.792  Sum_probs=31.5

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCcc
Q psy13160        114 NPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVE  155 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~  155 (186)
                      +.|.++||.++++|++..++| .|.|++||+|.     .|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~-~C~C~~g~~G~-----~Ce~   37 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNY-TCKCDPGFSGL-----KCEQ   37 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEE-EEEECTTEEST-----TSCE
T ss_pred             CcccCCcCCCCcEEECCCCCE-EEeCCCCCcCc-----CcCc
Confidence            467789999999999999999 99999999976     7753

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2e-07  Score=46.57  Aligned_cols=39  Identities=28%  Similarity=0.670  Sum_probs=30.2

Q ss_pred             CCCCCCCC--CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCC
Q psy13160        112 PLNPCHNS--PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRG  152 (186)
Q Consensus       112 ~~~~C~~~--~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~  152 (186)
                      +||||...  .|. ++.|+|+.|+| .|.|++||.+....++.
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~Gsy-~C~C~~Gy~~~~~~g~~   42 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTPGDF-ECKCDEGYESGFMMMKN   42 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTEE-EECCCSSEEECTTTSSS
T ss_pred             cccccCCCCCCCC-CCEeEcCCCCe-EEeCCCCCccCCCCCCc
Confidence            78999853  464 47899999999 99999999876433443

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=5e-07  Score=44.51  Aligned_cols=37  Identities=22%  Similarity=0.603  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCeeeeC--CCCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        116 CHNSPCGPNTQCSLL--DNGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       116 C~~~~C~~~~~C~~~--~~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      |.++||.++++|+..  ..+| .|.|++||+|.     .|+.+++
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y-~C~C~~g~~G~-----~Ce~~~~   39 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDF-VCQCPEGFAGK-----SCEIDTR   39 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCE-EEECCTTCBSS-----SCCBCSS
T ss_pred             CcCCCCCCCCEEecCCCCCCe-EECCCCCCCCC-----CcCcCcC
Confidence            457899999999875  4578 99999999976     8876654

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2e-07  Score=47.46  Aligned_cols=40  Identities=25%  Similarity=0.536  Sum_probs=34.0

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        112 PLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       112 ~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      .+++|.++||.+ ++|++..++| .|.|++||+|.     .|+.+|.
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y-~C~C~~G~~G~-----~Ce~~I~   46 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSF-SCDCRSGWEGR-----FCQREVS   46 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCC-CEEECTTEEST-----TSCEECC
T ss_pred             CCCcccCCCCCC-CEEECCCCCC-eEeCCCCCcCC-----CcccccC
Confidence            467899999986 7999999999 99999999876     8876553

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.4e-07  Score=46.32  Aligned_cols=40  Identities=28%  Similarity=0.608  Sum_probs=30.9

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCC
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPC  109 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c  109 (186)
                      ++|||+.......+.|+|+.++|.|.|.+||.+.+.++.|
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C   41 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC   41 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBE
T ss_pred             CccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCcc
Confidence            6888875443345799999999999999999877554444

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=9.8e-08  Score=47.75  Aligned_cols=30  Identities=27%  Similarity=0.587  Sum_probs=25.0

Q ss_pred             CCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        156 RRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      |||||+.  ..|. +++|+|+ |+|+|.|++||+
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~   34 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYE   34 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEE
T ss_pred             cccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCc
Confidence            7899974  4575 5799999 999999999984

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.3e-07  Score=46.17  Aligned_cols=35  Identities=23%  Similarity=0.632  Sum_probs=32.0

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +.|.++||.+++.|++..+.|.|.|.+||.|.    .|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~----~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGL----KCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEEST----TSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCc----CcC
Confidence            45788999999999999999999999999999    886

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=5.9e-08  Score=48.26  Aligned_cols=30  Identities=30%  Similarity=0.755  Sum_probs=24.2

Q ss_pred             CCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        156 RRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      |||||+.  ..|. ++.|+|+ |+|+|.|++||+
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~   33 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ   33 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEeCCCCCe
Confidence            4677863  4574 6799999 999999999995

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3e-07  Score=45.95  Aligned_cols=34  Identities=18%  Similarity=0.504  Sum_probs=27.5

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        112 PLNPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       112 ~~~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      +|+||+......++.|+|+.++| .|.|++||.+.
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y-~C~C~~Gy~l~   35 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSY-ICDCPPDFELN   35 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEE-EEECCTTCEEC
T ss_pred             CccccCCCCcCcCCEeECCCCCE-EEecCCCCEEC
Confidence            68888754333457999999999 99999999875

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.8e-06  Score=42.42  Aligned_cols=37  Identities=24%  Similarity=0.582  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCeeeecC--CCeEeeCCCCCcCCCCCCCCcCCCC
Q psy13160         74 CSPNPCGPYTGCRVVS--GSAVCFCLPEYTGDPPSVPCTLPLN  114 (186)
Q Consensus        74 C~~~~c~~~~~C~~~~--~~~~C~c~~g~~~~~~~~~c~~~~~  114 (186)
                      |.++||.++++|+...  ..|.|.|++||.|.    .|+.+++
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~----~Ce~~~~   39 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGK----SCEIDTR   39 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBSS----SCCBCSS
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCCC----CcCcCcC
Confidence            4578999999999754  57999999999999    9975554

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.2e-07  Score=44.97  Aligned_cols=35  Identities=23%  Similarity=0.810  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCCc
Q psy13160        114 NPCHNSPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~  154 (186)
                      +.|.++||.++++|++..++| .|.|++||.|.     .|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y-~C~C~~g~~G~-----~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNY-TCSCYPGFYGP-----ECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSE-EEEECTTEEST-----TSC
T ss_pred             CcccCCcCCCCcEEECCCCCe-EEeCCCCccCC-----CCC
Confidence            457789999999999999999 99999999976     775

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=1.4e-07  Score=45.92  Aligned_cols=29  Identities=24%  Similarity=0.591  Sum_probs=23.4

Q ss_pred             CCCCCC-CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        156 RRQPCE-PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      |||||+ .++|.  +.|+|+ |+|+|.|++||+
T Consensus         1 DidEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~   31 (40)
T d1dx5i3           1 DIDECENGGFCS--GVCHNLPGTFECICGPDSA   31 (40)
T ss_dssp             ECCHHHHCSSCS--SEEEECSSSEEEEECSSSS
T ss_pred             CccccCCCcCcc--CEeeCCCCCeEeECCCCCe
Confidence            467776 35674  499999 999999999995

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.7e-07  Score=44.33  Aligned_cols=35  Identities=26%  Similarity=0.712  Sum_probs=31.9

Q ss_pred             CCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         72 DECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +.|.++||.+++.|+...+.|.|.|.+||.|.    .|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~----~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGP----ECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEEST----TSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCC----CCC
Confidence            45778999999999999999999999999999    886

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=6.2e-07  Score=45.59  Aligned_cols=39  Identities=26%  Similarity=0.493  Sum_probs=33.7

Q ss_pred             CCCCCCCCCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCcCCC
Q psy13160         70 EGDECSPNPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCTLPL  113 (186)
Q Consensus        70 ~~~~C~~~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~  113 (186)
                      ..++|.++||.+ ++|++..++|.|.|.+||.|.    .|+.+|
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~----~Ce~~I   45 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGR----FCQREV   45 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCCCEEECTTEEST----TSCEEC
T ss_pred             CCCcccCCCCCC-CEEECCCCCCeEeCCCCCcCC----Cccccc
Confidence            457899999987 799998899999999999999    887444

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.4e-07  Score=47.15  Aligned_cols=30  Identities=27%  Similarity=0.691  Sum_probs=24.6

Q ss_pred             CCCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        156 RRQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      |||||+.  ..|. ++.|+|+ |+|+|.|++||+
T Consensus         2 DinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~   34 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYY   34 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCC
T ss_pred             CcccccCCCCCcC-CCEEECCCCCeEeECCCCCe
Confidence            7888873  4564 5699999 999999999995

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=4.5e-07  Score=44.11  Aligned_cols=32  Identities=28%  Similarity=0.700  Sum_probs=25.3

Q ss_pred             CCCCCCC-CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        112 PLNPCHN-SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       112 ~~~~C~~-~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      +||||+. .+|.  ..|+|+.|+| +|.|++||++.
T Consensus         1 DidEC~~~~~C~--~~C~N~~Gsy-~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECENGGFCS--GVCHNLPGTF-ECICGPDSALA   33 (40)
T ss_dssp             ECCHHHHCSSCS--SEEEECSSSE-EEEECSSSSCE
T ss_pred             CccccCCCcCcc--CEeeCCCCCe-EeECCCCCeeC
Confidence            3566653 4564  5899999999 99999999865

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.2e-06  Score=43.29  Aligned_cols=38  Identities=32%  Similarity=0.566  Sum_probs=28.3

Q ss_pred             CCCCCCC--CCCCCCeeeecCCCeEeeCCCCCcCCCCCCCC
Q psy13160         71 GDECSPN--PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPC  109 (186)
Q Consensus        71 ~~~C~~~--~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c  109 (186)
                      +|||...  .|. .+.|+|+.|+|.|.|.+||...+.++.|
T Consensus         2 idEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           2 IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             ccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            5667533  354 5799999999999999999877544343

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=4.1e-06  Score=43.70  Aligned_cols=29  Identities=24%  Similarity=0.504  Sum_probs=24.0

Q ss_pred             CCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         82 YTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        82 ~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ...|+|++|+|.|.|.+||.+..+++.|+
T Consensus        23 ~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_          23 QHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             cCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            45899999999999999998776555554

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.95  E-value=3.1e-06  Score=41.75  Aligned_cols=36  Identities=28%  Similarity=0.563  Sum_probs=31.2

Q ss_pred             CCCCCCCCCCCCCeeeec-CCCeEeeCCC-CCcCCCCCCCCc
Q psy13160         71 GDECSPNPCGPYTGCRVV-SGSAVCFCLP-EYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~~~c~~~~~C~~~-~~~~~C~c~~-g~~~~~~~~~c~  110 (186)
                      +++|.++||.++++|+.. .+.|.|.|.+ ||.|.    .|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~----~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP----NCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT----TTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCc----CcC
Confidence            577889999999999875 5789999986 89999    885

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=5.3e-06  Score=43.26  Aligned_cols=40  Identities=25%  Similarity=0.615  Sum_probs=28.3

Q ss_pred             CCCCCCCC--CC------CCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        112 PLNPCHNS--PC------GPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       112 ~~~~C~~~--~C------~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      +||||...  .|      .....|+|+.|+| +|.|++||++.. +++.|
T Consensus         3 DidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY-~C~C~~Gy~l~~-d~~tC   50 (53)
T d1apqa_           3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGY-FCSCRPGYELQE-DRHSC   50 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTSSEEEEETTEE-EEECSTTCEECT-TSSCE
T ss_pred             ecccccCCCCCcccCCCCCccCEeEcCCCCe-EeECCCCCeECC-CCCce
Confidence            67788642  22      2345799999999 999999998652 24445

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.3e-06  Score=42.03  Aligned_cols=28  Identities=25%  Similarity=0.621  Sum_probs=22.1

Q ss_pred             CCCCCC-CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        157 RQPCEP-NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       157 ~~~C~~-~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      ||||+. +.|.  ..|+|+ |+|+|.|++||+
T Consensus         1 idEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~   30 (41)
T d1i0ua2           1 IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ   30 (41)
T ss_dssp             CCTTTTTTSCS--SCEECSSSCCEECCCTTEE
T ss_pred             CccCCCCCCCC--CEeECCCCCEEeECCCCCe
Confidence            477763 4574  489999 999999999984

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.91  E-value=2.9e-06  Score=41.89  Aligned_cols=36  Identities=33%  Similarity=0.887  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCCeeeeC-CCCeeeeeCCC-CCccCCCCCCCCc
Q psy13160        113 LNPCHNSPCGPNTQCSLL-DNGFAQCTCLP-GYVESPNTIRGCV  154 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~~~-~~~~~~C~C~~-g~~~~~~~~~~c~  154 (186)
                      +++|.++||.++++|++. .++| .|.|++ ||.|.     .|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y-~C~C~~~G~~G~-----~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRY-QCDCTRTGYSGP-----NCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEE-EEECTTSSEETT-----TTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCE-EEECCCCCcCCc-----CcC
Confidence            578888999999999875 5778 999986 89876     775

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=7.9e-07  Score=44.27  Aligned_cols=39  Identities=28%  Similarity=0.465  Sum_probs=29.3

Q ss_pred             CCCCCCCC--CCCCCCeeeecCCCeEeeCCCCCcCCCCCCCC
Q psy13160         70 EGDECSPN--PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPC  109 (186)
Q Consensus        70 ~~~~C~~~--~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c  109 (186)
                      ++|||...  .|. .+.|+|++|+|.|.|.+||.....++.|
T Consensus         2 DinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CcccccCCCCCcC-CCEEECCCCCeEeECCCCCeECcCCCcc
Confidence            57778633  354 4689999999999999999877554444

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=2.9e-06  Score=41.30  Aligned_cols=31  Identities=29%  Similarity=0.815  Sum_probs=27.0

Q ss_pred             CCCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        119 SPCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       119 ~~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      ..|..++.|+|+.++| .|+|++||.|+   |+.|
T Consensus         7 ~~C~~~A~C~Nt~Gsy-~C~C~~Gy~Gd---G~~C   37 (40)
T d1gl4a2           7 HQCSVHAECRDYATGF-CCRCVANYTGN---GRQC   37 (40)
T ss_dssp             GGSCTTEEEEECSSCE-EEEECTTEEEC---SSSE
T ss_pred             CCCCCCCEeecCCCCe-EeECCCCCcCC---CCEe
Confidence            3577789999999999 99999999987   6666

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.2e-06  Score=40.74  Aligned_cols=38  Identities=29%  Similarity=0.675  Sum_probs=29.1

Q ss_pred             CCCCCC-CCCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         71 GDECSP-NPCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~-~~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +|||.. .+|.  ..|+++.++|.|.|.+||...++++.|+
T Consensus         1 idEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~   39 (41)
T d1i0ua2           1 IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACK   39 (41)
T ss_dssp             CCTTTTTTSCS--SCEECSSSCCEECCCTTEEECTTTCCEE
T ss_pred             CccCCCCCCCC--CEeECCCCCEEeECCCCCeECCCCCccc
Confidence            467753 3454  4899999999999999999876665664

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.80  E-value=5.8e-06  Score=41.46  Aligned_cols=40  Identities=23%  Similarity=0.376  Sum_probs=27.8

Q ss_pred             CCCCCCC---CCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         71 GDECSPN---PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~~---~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ||||...   .......|+++.++|.|.|.+||....+++.|+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccc
Confidence            4666532   122345899999999999999998776655654

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=1.4e-05  Score=39.11  Aligned_cols=35  Identities=29%  Similarity=0.719  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCeeeec-CCCeEeeCC-CCCcCCCCCCCCc
Q psy13160         72 DECSPNPCGPYTGCRVV-SGSAVCFCL-PEYTGDPPSVPCT  110 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~~-~~~~~C~c~-~g~~~~~~~~~c~  110 (186)
                      |+|.++||.++++|++. .+.|.|.|. +||.|.    .|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~----~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE----NCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT----TTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCc----CcC
Confidence            56888999999999875 578999996 699999    885

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=1.5e-05  Score=38.96  Aligned_cols=35  Identities=29%  Similarity=0.906  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCCeeeeC-CCCeeeeeCC-CCCccCCCCCCCCc
Q psy13160        114 NPCHNSPCGPNTQCSLL-DNGFAQCTCL-PGYVESPNTIRGCV  154 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~~-~~~~~~C~C~-~g~~~~~~~~~~c~  154 (186)
                      |+|.++||.++++|++. .++| .|.|+ +||+|.     .|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y-~C~C~~~gy~G~-----~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQY-KCDCTRTGFYGE-----NCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEE-EEECTTSSEETT-----TTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCE-EEeCcCCCcCCc-----CcC
Confidence            57888999999999875 5678 99996 699876     775

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.3e-05  Score=40.19  Aligned_cols=40  Identities=25%  Similarity=0.412  Sum_probs=29.2

Q ss_pred             CCCCCCCC---CCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         71 GDECSPNP---CGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        71 ~~~C~~~~---c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ||||....   ......|+|+.++|.|.|.+||....+++.|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~   43 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS   43 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCcc
Confidence            46675432   23356899999999999999998776655554

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=6.6e-06  Score=44.50  Aligned_cols=44  Identities=18%  Similarity=0.413  Sum_probs=33.8

Q ss_pred             CCCCCCCCCCCCCeee-----eCCCCeeeeeCCCCCccCCCCCCCCccCCCCCCC
Q psy13160        113 LNPCHNSPCGPNTQCS-----LLDNGFAQCTCLPGYVESPNTIRGCVERRQPCEP  162 (186)
Q Consensus       113 ~~~C~~~~C~~~~~C~-----~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C~~  162 (186)
                      .++|..++|.++++|.     +..++| .|.|++||+|.     .|+..+.....
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y-~C~C~~gy~G~-----~Ce~~~~~~~~   54 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRY-LCKCQPGFTGA-----RCTENVPMKVQ   54 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCE-EEECCTTEEST-----TSCEECCSSCT
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCE-EeECCCCCCCC-----CcCCCCCcccc
Confidence            4566678999999995     456788 99999999976     88766655543

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.70  E-value=1.3e-05  Score=40.15  Aligned_cols=39  Identities=23%  Similarity=0.625  Sum_probs=26.1

Q ss_pred             CCCCCCC---CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        113 LNPCHNS---PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       113 ~~~C~~~---~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      ||||+..   .......|+|+.++| +|.|++||.... +++.|
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy-~C~C~~Gy~L~~-d~~tC   42 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGY-YCSCRVGYILHQ-NKHTC   42 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEE-EEECCTTEEECT-TSSCE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCE-EEeCCCCCEECC-CCCcc
Confidence            4666532   223346899999999 999999998653 34445

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=2.9e-05  Score=38.78  Aligned_cols=39  Identities=28%  Similarity=0.657  Sum_probs=27.2

Q ss_pred             CCCCCCC---CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        113 LNPCHNS---PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       113 ~~~C~~~---~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      ||||+..   .......|+|+.++| .|.|++||.... +++.|
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy-~C~C~~Gy~l~~-d~~tC   42 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGF-YCSCRAGYVLHR-NKRTC   42 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEE-EEECCTTEEECT-TSSCE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCe-EEECCCCCeECC-CCCCc
Confidence            4666642   123356899999999 999999998653 34445

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=4.1e-06  Score=40.72  Aligned_cols=24  Identities=21%  Similarity=0.443  Sum_probs=21.3

Q ss_pred             CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        163 NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       163 ~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +.|+.++.|+|+ |+|.|.|++||+
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~   31 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYT   31 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCc
Confidence            468889999999 899999999984

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=3.6e-05  Score=41.47  Aligned_cols=42  Identities=24%  Similarity=0.382  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCCeeee-----cCCCeEeeCCCCCcCCCCCCCCcCCCCCCC
Q psy13160         72 DECSPNPCGPYTGCRV-----VSGSAVCFCLPEYTGDPPSVPCTLPLNPCH  117 (186)
Q Consensus        72 ~~C~~~~c~~~~~C~~-----~~~~~~C~c~~g~~~~~~~~~c~~~~~~C~  117 (186)
                      ++|..++|.+++.|..     ..+.|.|.|.+||.|.    .|+..+....
T Consensus         7 ~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~----~Ce~~~~~~~   53 (63)
T d1haea_           7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA----RCTENVPMKV   53 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST----TSCEECCSSC
T ss_pred             CCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCC----CcCCCCCccc
Confidence            4566789999999953     3468999999999999    9974444433

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=2.7e-05  Score=37.79  Aligned_cols=28  Identities=29%  Similarity=0.721  Sum_probs=21.7

Q ss_pred             CCCCCC--CCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        157 RQPCEP--NVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       157 ~~~C~~--~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      +|+|+.  ..|.  ..|+|+ ++|+|.|++||+
T Consensus         2 ~neC~~~nggC~--h~C~n~~g~~~C~C~~Gy~   32 (40)
T d3bpse1           2 TNECLDNNGGCS--HVCNDLKIGYECLCPDGFQ   32 (40)
T ss_dssp             SCGGGTGGGGCS--SEEEECSSSEEEECCTTCC
T ss_pred             cccCCCCCCCCc--CEEEcCCCCEEEECCCCCE
Confidence            466764  3464  489998 899999999995

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00013  Score=35.62  Aligned_cols=31  Identities=32%  Similarity=0.672  Sum_probs=25.4

Q ss_pred             CCCCCCeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         78 PCGPYTGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        78 ~c~~~~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +|.  ..|++++++|.|.|..||...++++.|.
T Consensus        10 ~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2          10 PCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCC--CEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            454  4899999999999999999876665653

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.00032  Score=36.09  Aligned_cols=35  Identities=20%  Similarity=0.529  Sum_probs=27.7

Q ss_pred             CCCCCCCCCCCCeeee--CCCCeeeeeCCCCCccCCCCCCCCc
Q psy13160        114 NPCHNSPCGPNTQCSL--LDNGFAQCTCLPGYVESPNTIRGCV  154 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~--~~~~~~~C~C~~g~~~~~~~~~~c~  154 (186)
                      +++..++|.++++|+.  ...+| .|.|++||+|.     .|+
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~-~C~C~~gy~G~-----~Ce   43 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSY-TCNCVIGYSGD-----RCQ   43 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCE-EEECCTTCCSS-----SSC
T ss_pred             CCCCCCCCCCCcEeeccCCCCCe-EeECCCCCcCC-----CCc
Confidence            3455678999999974  44578 99999999876     775

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00033  Score=34.16  Aligned_cols=30  Identities=30%  Similarity=0.933  Sum_probs=23.3

Q ss_pred             CCCCCCeeeeCCCCeeeeeCCCCCccCCCCCCCC
Q psy13160        120 PCGPNTQCSLLDNGFAQCTCLPGYVESPNTIRGC  153 (186)
Q Consensus       120 ~C~~~~~C~~~~~~~~~C~C~~g~~~~~~~~~~c  153 (186)
                      +|.  ..|+++.++| +|.|++||.... +++.|
T Consensus        10 ~C~--~~C~n~~Gsy-~C~C~~Gy~L~~-d~~tC   39 (42)
T d1nzia2          10 PCS--HFCNNFIGGY-FCSCPPEYFLHD-DMKNC   39 (42)
T ss_dssp             CSS--SEEEEETTEE-EEECCTTCEECT-TSSCE
T ss_pred             CCC--CEeecCCCCE-EEeCCCCCEECC-CCCee
Confidence            464  4899999999 999999998653 34444

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00012  Score=33.58  Aligned_cols=28  Identities=32%  Similarity=0.711  Sum_probs=22.2

Q ss_pred             CCCC-CCCCCCCCeecCC-CCCeeeCCCCCC
Q psy13160        158 QPCE-PNVCGAGAVCDPN-RAPYCFCPEGTM  186 (186)
Q Consensus       158 ~~C~-~~~C~~~~~C~~~-~~~~C~C~~g~~  186 (186)
                      |+|+ .++|. +++|.|. |+|.|.|.+||.
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSC
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcC
Confidence            4555 36786 5799998 999999999983

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.00088  Score=34.39  Aligned_cols=34  Identities=26%  Similarity=0.525  Sum_probs=28.5

Q ss_pred             CCCCCCCCCCCeeeecC--CCeEeeCCCCCcCCCCCCCCc
Q psy13160         73 ECSPNPCGPYTGCRVVS--GSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        73 ~C~~~~c~~~~~C~~~~--~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +|..++|.++++|+...  ..|.|.|.++|.|.    .|+
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~----~Ce   43 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD----RCQ   43 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTTCCSS----SSC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCCCcCC----CCc
Confidence            45578899999998543  57999999999999    887

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00022  Score=34.44  Aligned_cols=31  Identities=29%  Similarity=0.767  Sum_probs=23.8

Q ss_pred             CCCCCC--CCCCCCCeeeeCCCCeeeeeCCCCCccC
Q psy13160        113 LNPCHN--SPCGPNTQCSLLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       113 ~~~C~~--~~C~~~~~C~~~~~~~~~C~C~~g~~~~  146 (186)
                      +|||..  ..|.  ..|++++++| .|.|++||...
T Consensus         2 ~neC~~~nggC~--h~C~n~~g~~-~C~C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGCS--HVCNDLKIGY-ECLCPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGCS--SEEEECSSSE-EEECCTTCCEE
T ss_pred             cccCCCCCCCCc--CEEEcCCCCE-EEECCCCCEEC
Confidence            356654  3464  4899999999 99999999763

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00033  Score=35.29  Aligned_cols=32  Identities=22%  Similarity=0.618  Sum_probs=25.6

Q ss_pred             CCCCCCCCCCCCeeee--CCCCeeeeeCCCCCccC
Q psy13160        114 NPCHNSPCGPNTQCSL--LDNGFAQCTCLPGYVES  146 (186)
Q Consensus       114 ~~C~~~~C~~~~~C~~--~~~~~~~C~C~~g~~~~  146 (186)
                      ++|..++|.++++|+.  ...+| .|.|++||+|.
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~-~C~C~~gy~G~   38 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKY-ACNCVVGYIGE   38 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEE-EEEECTTEEST
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCe-EEeCCCCcccC
Confidence            3456678999999975  44568 99999999976

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00053  Score=34.46  Aligned_cols=34  Identities=21%  Similarity=0.479  Sum_probs=28.2

Q ss_pred             CCCCCCCCCCCeeeecC--CCeEeeCCCCCcCCCCCCCCc
Q psy13160         73 ECSPNPCGPYTGCRVVS--GSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        73 ~C~~~~c~~~~~C~~~~--~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      +|..++|.++++|+...  ..|+|.|.++|.|.    .|+
T Consensus         6 ~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~----~Ce   41 (48)
T d1nqlb_           6 LSHDGYCLHDGVCMYIEALDKYACNCVVGYIGE----RCQ   41 (48)
T ss_dssp             STTCCEECTTCEEEEETTTTEEEEEECTTEEST----TSC
T ss_pred             CCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccC----CCC
Confidence            45567899999998643  57999999999999    886

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.003  Score=28.76  Aligned_cols=30  Identities=37%  Similarity=1.019  Sum_probs=23.7

Q ss_pred             CCCC-CCCCCCCCeeeeCCCCeeeeeCCCCCcc
Q psy13160        114 NPCH-NSPCGPNTQCSLLDNGFAQCTCLPGYVE  145 (186)
Q Consensus       114 ~~C~-~~~C~~~~~C~~~~~~~~~C~C~~g~~~  145 (186)
                      ++|+ .++|.+ ++|.|..++| .|.|..||..
T Consensus         2 dECsignpCGn-GTCtNviGgF-ec~C~~GFep   32 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGF-ECTCEEGFEP   32 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSE-EECCSSSSCC
T ss_pred             CccccCCccCC-ceeeecccce-EEeecCCcCC
Confidence            3454 357775 6899999999 9999999964

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.0024  Score=30.06  Aligned_cols=29  Identities=31%  Similarity=0.716  Sum_probs=22.6

Q ss_pred             CCCCCCCCCCCCCCeecCC--CCCeeeCCCCCC
Q psy13160        156 RRQPCEPNVCGAGAVCDPN--RAPYCFCPEGTM  186 (186)
Q Consensus       156 ~~~~C~~~~C~~~~~C~~~--~~~~C~C~~g~~  186 (186)
                      .+|.|...+|..  +|...  ++|+|.|.+||.
T Consensus         3 ~vDPCf~~~CE~--qCqP~~~~~Y~CiCaeGFa   33 (43)
T d1dx5i1           3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFA   33 (43)
T ss_dssp             CCCGGGGCCCSS--EEEECSSSCEEEECCTTEE
T ss_pred             ccccccCCCcce--eeeeCCCCcceEEeccccc
Confidence            457787777865  78765  589999999983

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.54  E-value=0.0022  Score=32.53  Aligned_cols=32  Identities=22%  Similarity=0.372  Sum_probs=26.6

Q ss_pred             eeeecCCCeEeeCCCCCcCCCCCCCCcCCCCCC
Q psy13160         84 GCRVVSGSAVCFCLPEYTGDPPSVPCTLPLNPC  116 (186)
Q Consensus        84 ~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~~C  116 (186)
                      .|+++.++|.|.|..||....+++.|. +++++
T Consensus        11 ~C~~~~~~~~C~C~~Gy~L~~D~~tC~-~~~~~   42 (51)
T d1kigl_          11 FCREERSEVRCSCAHGYVLGDDSKSCV-STERF   42 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEE-ECSSS
T ss_pred             EeEcCCCcEEeEcCCCCEECCCCCccc-cCCcc
Confidence            688889999999999999887777887 55554

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0043  Score=31.27  Aligned_cols=28  Identities=25%  Similarity=0.472  Sum_probs=24.9

Q ss_pred             CeeeecCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         83 TGCRVVSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        83 ~~C~~~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ..|+++.++|.|.|..||....+++.|.
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~~tC~   38 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDLLQCH   38 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTSSCEE
T ss_pred             cEeecCCCCeEEECCCCCEECCCCCccc
Confidence            4899999999999999999887777886

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.47  E-value=0.0037  Score=31.67  Aligned_cols=32  Identities=25%  Similarity=0.596  Sum_probs=25.3

Q ss_pred             eeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCCC
Q psy13160        126 QCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQPC  160 (186)
Q Consensus       126 ~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~C  160 (186)
                      .|+++.++| +|.|++||.... +++.|. +++++
T Consensus        11 ~C~~~~~~~-~C~C~~Gy~L~~-D~~tC~-~~~~~   42 (51)
T d1kigl_          11 FCREERSEV-RCSCAHGYVLGD-DSKSCV-STERF   42 (51)
T ss_dssp             CCCEETTEE-CCCCCTTEEECT-TSSCEE-ECSSS
T ss_pred             EeEcCCCcE-EeEcCCCCEECC-CCCccc-cCCcc
Confidence            588999999 999999998653 567784 66665

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.012  Score=29.57  Aligned_cols=31  Identities=23%  Similarity=0.433  Sum_probs=24.2

Q ss_pred             CeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCC
Q psy13160        125 TQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQ  158 (186)
Q Consensus       125 ~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~  158 (186)
                      ..|+++.++| +|.|++||.... +++.|. .++
T Consensus        11 ~~C~~~~g~~-~C~C~~Gy~L~~-D~~tC~-~~~   41 (50)
T d1autl2          11 HYCLEEVGWR-RCSCAPGYKLGD-DLLQCH-PAV   41 (50)
T ss_dssp             SEEEECSSSE-EEECCTTEEECT-TSSCEE-ECS
T ss_pred             cEeecCCCCe-EEECCCCCEECC-CCCccc-cCC
Confidence            4799999999 999999998763 466774 443

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0043  Score=31.38  Aligned_cols=31  Identities=29%  Similarity=0.509  Sum_probs=26.2

Q ss_pred             CeeeecCCCeEeeCCCCCcCCCCCCCCcCCCC
Q psy13160         83 TGCRVVSGSAVCFCLPEYTGDPPSVPCTLPLN  114 (186)
Q Consensus        83 ~~C~~~~~~~~C~c~~g~~~~~~~~~c~~~~~  114 (186)
                      ..|+++.++|.|.|..||...++++.|. +++
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~D~~tC~-~~~   42 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLADNGKACI-PTG   42 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSCEE-ESS
T ss_pred             cEeecCCCCeEeEcCCCCEECCCCCccc-cCC
Confidence            4899999999999999999887777886 443

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0076  Score=30.44  Aligned_cols=32  Identities=25%  Similarity=0.631  Sum_probs=24.8

Q ss_pred             CeeeeCCCCeeeeeCCCCCccCCCCCCCCccCCCC
Q psy13160        125 TQCSLLDNGFAQCTCLPGYVESPNTIRGCVERRQP  159 (186)
Q Consensus       125 ~~C~~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~  159 (186)
                      ..|.++.++| +|.|++||.... +++.|. ++++
T Consensus        12 h~C~n~~g~~-~C~C~~Gy~L~~-D~~tC~-~~~~   43 (51)
T d2p3ua1          12 QFCHEEQNSV-VCSCARGYTLAD-NGKACI-PTGP   43 (51)
T ss_dssp             SEEEEETTEE-EEECCTTEEECT-TSSCEE-ESSS
T ss_pred             cEeecCCCCe-EeEcCCCCEECC-CCCccc-cCCc
Confidence            4799999999 999999998763 466774 4443

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.033  Score=27.29  Aligned_cols=27  Identities=30%  Similarity=0.484  Sum_probs=20.2

Q ss_pred             CCCCCCCCeee--eCCCCeeeeeCCCCCccC
Q psy13160        118 NSPCGPNTQCS--LLDNGFAQCTCLPGYVES  146 (186)
Q Consensus       118 ~~~C~~~~~C~--~~~~~~~~C~C~~g~~~~  146 (186)
                      .++|.+ +.|.  .....+ .|.|++||+|.
T Consensus        11 ~~yC~n-G~C~~~~~~~~~-~C~C~~gY~G~   39 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQN-YCRCEVGYTGV   39 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEE-EEEECTTCSST
T ss_pred             CCcCcC-CEEEEeCCCCcc-EeECCCCceec
Confidence            357887 6674  344567 99999999986

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.059  Score=26.85  Aligned_cols=27  Identities=19%  Similarity=0.427  Sum_probs=20.9

Q ss_pred             CCCCCCCeeeeC-CCCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCSLL-DNGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~~~-~~~~~~C~C~~g~~~~  146 (186)
                      +.|.+++.|... ...+ .|.|+.||+|.
T Consensus        14 ~yC~nGgcc~~~~~~~~-~C~C~~gy~G~   41 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTP-SCVCDEGYIGA   41 (50)
T ss_dssp             TSCTTCCEEEETTTTEE-EECCCTTEETT
T ss_pred             CCccCCeEEEeCCCCCc-EeECCCCCeeC
Confidence            578888888544 4455 99999999986

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.043  Score=27.37  Aligned_cols=26  Identities=19%  Similarity=0.221  Sum_probs=19.6

Q ss_pred             eeee------cCCCeEeeCCCCCcCCCCCCCC
Q psy13160         84 GCRV------VSGSAVCFCLPEYTGDPPSVPC  109 (186)
Q Consensus        84 ~C~~------~~~~~~C~c~~g~~~~~~~~~c  109 (186)
                      .|+.      ..++|.|.|+.||...++++.|
T Consensus        17 ~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tC   48 (50)
T d1ijqa2          17 LCLPAPQINPHSPKFTCACPDGMLLARDMRSC   48 (50)
T ss_dssp             EEEECCCCSTTCCSEEEECCTTCEECTTSSCE
T ss_pred             ccCCCcCcccCCCCEEEeCCCCCEECCCCCcc
Confidence            7763      3468999999999987665555

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.1  Score=25.42  Aligned_cols=30  Identities=27%  Similarity=0.469  Sum_probs=23.2

Q ss_pred             CCCCCCCCeeee--cCCCeEeeCCCCCcCCCCCCCCc
Q psy13160         76 PNPCGPYTGCRV--VSGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        76 ~~~c~~~~~C~~--~~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      .+.|.+ +.|..  ....+.|.|.+||.|.    .|+
T Consensus        11 ~~yC~n-G~C~~~~~~~~~~C~C~~gY~G~----RCe   42 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQNYCRCEVGYTGV----RCE   42 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEEEEEECTTCSST----TSC
T ss_pred             CCcCcC-CEEEEeCCCCccEeECCCCceec----Cce
Confidence            357887 66753  3367899999999999    886

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.087  Score=26.06  Aligned_cols=27  Identities=30%  Similarity=0.501  Sum_probs=20.2

Q ss_pred             CCCCCCCeeeeCC-CCeeeeeCCCCCccC
Q psy13160        119 SPCGPNTQCSLLD-NGFAQCTCLPGYVES  146 (186)
Q Consensus       119 ~~C~~~~~C~~~~-~~~~~C~C~~g~~~~  146 (186)
                      +.|.+++.|.... ..+ .|.|++||+|.
T Consensus        13 ~yClnGgcc~~~~~~~~-~C~C~~gy~G~   40 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKP-ACVCHSGYVGA   40 (49)
T ss_dssp             CSSTTEEEEEETTTTEE-EEEECTTEEST
T ss_pred             CEeeCCeEEecCCCCCc-EeECCCCCEec
Confidence            5688877774443 455 99999999987

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.38  E-value=0.11  Score=25.79  Aligned_cols=31  Identities=26%  Similarity=0.441  Sum_probs=24.6

Q ss_pred             CCCCCCCCeeeec-CCCeEeeCCCCCcCCCCCCCCc
Q psy13160         76 PNPCGPYTGCRVV-SGSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        76 ~~~c~~~~~C~~~-~~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      .+.|.+++.|... ...+.|.|..||.|.    .|+
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~G~----rCe   44 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGA----RCE   44 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETT----TTC
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCeeC----CCc
Confidence            3568888888543 367899999999999    886

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.2  Score=22.74  Aligned_cols=28  Identities=21%  Similarity=0.496  Sum_probs=22.0

Q ss_pred             CCCCCeeeecC---CCeEeeCCCCCcCCCCCCCCc
Q psy13160         79 CGPYTGCRVVS---GSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        79 c~~~~~C~~~~---~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      |.+++.|+...   .-.+|.|+.+|.|.    .|+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~----HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQ----HCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEEST----TSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCce----eEE
Confidence            56788888643   34679999999999    886

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.89  E-value=0.1  Score=26.70  Aligned_cols=28  Identities=21%  Similarity=0.481  Sum_probs=23.4

Q ss_pred             CeeeecC-CCeEeeCCCCCcCCCCCCCCc
Q psy13160         83 TGCRVVS-GSAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        83 ~~C~~~~-~~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ..|+++. +.|.|.|..||....+++.|.
T Consensus        12 h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~   40 (57)
T d1rfnb_          12 QFCKNSADNKVVCSCTEGYRLAENQKSCE   40 (57)
T ss_dssp             SEEEECTTSCEEEECCTTEEECTTSSSEE
T ss_pred             cEeeeCCCCCeEeECCCCCEECCCCCccc
Confidence            4898886 479999999999887777886

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.77  E-value=0.1  Score=24.75  Aligned_cols=15  Identities=20%  Similarity=0.625  Sum_probs=12.0

Q ss_pred             ceeeCCCCCCCCCcc
Q psy13160         54 PECLCNSDCPFNMAF   68 (186)
Q Consensus        54 ~~C~C~~g~~~~~c~   68 (186)
                      +.|.|..||+|.+|+
T Consensus        24 ~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_          24 PSCICHPGYHGERCH   38 (41)
T ss_dssp             CCEEECTTEESTTCC
T ss_pred             ceeECCCCCeecCcc
Confidence            467788899999885

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.16  E-value=0.31  Score=24.39  Aligned_cols=28  Identities=29%  Similarity=0.528  Sum_probs=22.7

Q ss_pred             CeeeecCC-CeEeeCCCCCcCCCCCCCCc
Q psy13160         83 TGCRVVSG-SAVCFCLPEYTGDPPSVPCT  110 (186)
Q Consensus        83 ~~C~~~~~-~~~C~c~~g~~~~~~~~~c~  110 (186)
                      ..|+++.+ .|.|.|..||....+++.|.
T Consensus        11 h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~   39 (53)
T d2bz6l1          11 QYCSDHTGTKRSCRCHEGYSLLADGVSCT   39 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTSSCEE
T ss_pred             CEeeeCCCCCEEeECCCCCEECCCCCccc
Confidence            37888875 58899999999887777775