Psyllid ID: psy13164

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MEPKVEESQEHVGASPSLYDPFRVIKREPLDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL
Secondary Structure (PSIPRED)
ccccccHHccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEccccHHHHHcccccccccccccccccccccccHHHHHccccccccccccccEccccHHHHHHHHcccccccccccHccHHHHHHHHHccccEEEcccccccEccccHHHHHHHHccccEEEcccccccEccccHHHHHHHHccccEEEcccccccEccccHHHHHHHHccccEEEEcc
Coil and Loop (DISEMBL)
mepkveesqehvgaspslydpfrvikrepldipyevtvkeesyegdsinveenngndavtRDCLEFFKShdstlknesdherrsinyncqqsykvgklnkiLHRGIRYkcdlcskeyfhkgsltehkkrhqgirykcdlcskeyfhkgyltdhkkihQGIRykcnlcskeflrKDILIEHKKIhqgirfkcdl
Flexible Loop (DISEMBL)
mepkveesqehvgaspslydpfrvIKREPLDIPYEVTvkeesyegdsinveenngndaVTRDCLEFFKSHDstlknesdherrsinyncqqsykvgklnkiLHRGIRYKCDLCSKEYFHkgsltehkkrhqgirykCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEhkkihqgirfkcdl
Low Complexity Region (SEG)
MEPKVEESQEHVGASPSLYDPFRVIKREPLDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL
Disordered region (IsUnstruct)
******************YDPFRVIKREPLDIPYEVTVK*******************VTRDCLEFF*****************INYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFK***
Disordered Region (DISOPRED)
**PKVEESQEHVGASPSLYDPFRVIKREPLDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL
Disordered Region (DISEMBL)
**************SPSLYDPFRVIKREPLDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSHDS*********RRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL
Disordered Region (DISPRO)
****VEESQEHVGASPSLYDPFRVIKREPLDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEPKVEESQEHVGASPSLYDPFRVIKREPLDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	193	2.2.26 [Sep-21-2011]
O43309	604	Zinc finger and SCAN doma	yes	N/A	0.880	0.281	0.336	3e-15
A1YEP8	604	Zinc finger and SCAN doma	N/A	N/A	0.880	0.281	0.336	3e-15
A2T6V8	604	Zinc finger and SCAN doma	yes	N/A	0.880	0.281	0.336	4e-15
A1YFW2	604	Zinc finger and SCAN doma	N/A	N/A	0.880	0.281	0.336	4e-15
A2T6E3	604	Zinc finger and SCAN doma	N/A	N/A	0.880	0.281	0.331	8e-15
A2T7F4	604	Zinc finger and SCAN doma	N/A	N/A	0.880	0.281	0.331	1e-14
Q8TF45	676	Zinc finger protein 418 O	no	N/A	0.471	0.134	0.421	1e-13
Q9H4T2	348	Zinc finger and SCAN doma	no	N/A	0.445	0.247	0.404	2e-13
Q99676	751	Zinc finger protein 184 O	no	N/A	0.471	0.121	0.431	2e-13
Q9UDV7	671	Zinc finger protein 282 O	no	N/A	0.564	0.162	0.381	2e-13

>sp|O43309|ZSC12_HUMAN Zinc finger and SCAN domain-containing protein 12 OS=Homo sapiens GN=ZSCAN12 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|A1YEP8|ZSC12_GORGO Zinc finger and SCAN domain-containing protein 12 OS=Gorilla gorilla gorilla GN=ZSCAN12 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

May be involved in transcriptional regulation.

Gorilla gorilla gorilla (taxid: 9595)

>sp|A2T6V8|ZSC12_PANTR Zinc finger and SCAN domain-containing protein 12 OS=Pan troglodytes GN=ZSCAN12 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTHCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

May be involved in transcriptional regulation.

Pan troglodytes (taxid: 9598)

>sp|A1YFW2|ZSC12_PANPA Zinc finger and SCAN domain-containing protein 12 OS=Pan paniscus GN=ZSCAN12 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTHCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

May be involved in transcriptional regulation.

Pan paniscus (taxid: 9597)

>sp|A2T6E3|ZSC12_MACNE Zinc finger and SCAN domain-containing protein 12 OS=Macaca nemestrina GN=ZSCAN12 PE=3 SV=1

 Score = 80.1 bits (196), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKC++C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCEVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

May be involved in transcriptional regulation.

Macaca nemestrina (taxid: 9545)

>sp|A2T7F4|ZSC12_PONPY Zinc finger and SCAN domain-containing protein 12 OS=Pongo pygmaeus GN=ZSCAN12 PE=3 SV=1

 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHKRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKC++C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCEVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

May be involved in transcriptional regulation.

Pongo pygmaeus (taxid: 9600)

>sp|Q8TF45|ZN418_HUMAN Zinc finger protein 418 OS=Homo sapiens GN=ZNF418 PE=1 SV=2

 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 4/95 (4%)

Query: 102 LHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
           +H G R Y+C  C K + HKGSL +H++ H G R Y+C  C K + HKG L  H+++H G
Sbjct: 251 VHTGKRPYECGECGKSFSHKGSLVQHQRVHTGKRPYECGECGKSFSHKGSLVQHQRVHTG 310

Query: 160 IR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
            R Y+C  C K F +   LI+H+++H G R ++C+
Sbjct: 311 ERPYECGECGKSFSQNGTLIKHQRVHTGERPYECE 345

Transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q9H4T2|ZSC16_HUMAN Zinc finger and SCAN domain-containing protein 16 OS=Homo sapiens GN=ZSCAN16 PE=1 SV=2

 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 3/89 (3%)

Query: 107 RYKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKC 164
           RYKCD C K + H   L++H++ H G + YKCD C K +  + +L  H ++H G++ YKC
Sbjct: 235 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGVKPYKC 294

Query: 165 NLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
             C K+F  +  LI+H++IH G + ++CD
Sbjct: 295 KECGKDFSGRTGLIQHQRIHTGEKPYECD 323

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q99676|ZN184_HUMAN Zinc finger protein 184 OS=Homo sapiens GN=ZNF184 PE=1 SV=4

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 4/95 (4%)

Query: 102 LHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
           +H G + YKCD C K +    SLT+H++ H G + YKCD C K +  + +L  H++IH G
Sbjct: 271 IHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKAFSQRTHLVQHQRIHTG 330

Query: 160 IR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
            + Y CN C K F ++   +EH+KIH G + FKCD
Sbjct: 331 EKPYTCNECGKAFSQRGHFMEHQKIHTGEKPFKCD 365

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UDV7|ZN282_HUMAN Zinc finger protein 282 OS=Homo sapiens GN=ZNF282 PE=2 SV=3

 Score = 75.1 bits (183), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 80  HERRSINYNCQQ---SYKVGKLNKILHRGIR----YKCDLCSKEYFHKGSLTEHKKRHQG 132
           H  RS  Y+C +   S+ V K   I HR       Y+C  C K +     L  H+  H+G
Sbjct: 511 HGARSKPYSCPECGKSFGVRKSLIIHHRSHTKERPYECAECEKSFNCHSGLIRHQMTHRG 570

Query: 133 IR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR 188
            R YKC  C K Y  K +L +H+++H G R ++C LC K F+RK  L++H++IH G R
Sbjct: 571 ERPYKCSECEKTYSRKEHLQNHQRLHTGERPFQCALCGKSFIRKQNLLKHQRIHTGER 628

Binds to the U5 repressive element (U5RE) of the human T cell leukemia virus type I long terminal repeat. It recognizes the 5'-TCCACCCC-3' sequence as a core motif and exerts a strong repressive effect on HTLV-I LTR-mediated expression.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
350582020	618	PREDICTED: zinc finger protein 2-like [S	0.699	0.218	0.335	3e-14
442759863	348	Putative zinc finger protein [Ixodes ric	0.544	0.301	0.410	4e-14
292626254	394	PREDICTED: zinc finger protein 226-like	0.803	0.393	0.364	6e-14
158260627	604	unnamed protein product [Homo sapiens]	0.880	0.281	0.336	1e-13
254281232	611	zinc finger and SCAN domain-containing p	0.880	0.278	0.342	1e-13
40788255	613	KIAA0426 [Homo sapiens]	0.880	0.277	0.336	1e-13
256085594	357	zinc finger protein [Schistosoma mansoni	0.481	0.260	0.416	2e-13
11135560	604	RecName: Full=Zinc finger and SCAN domai	0.880	0.281	0.336	2e-13
146328578	604	RecName: Full=Zinc finger and SCAN domai	0.880	0.281	0.336	2e-13
395537815	684	PREDICTED: zinc finger protein 84-like [	0.440	0.124	0.5	2e-13

>gi|350582020|ref|XP_003354739.2| PREDICTED: zinc finger protein 2-like [Sus scrofa]

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 11/146 (7%)

Query: 57  DAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIR-------YK 109
           D   RDC + F  H S ++++  H      Y+C +  K       L R +        Y+
Sbjct: 365 DQECRDCGKTFFDHSSLIRHQRTHTGEK-PYDCPECGKAFSHRSSLSRHLMSHTGESPYE 423

Query: 110 CDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLC 167
           C+ C K +F + SLT H++ H G + +KC+ C K +F +  LT H++IH G   Y+CN C
Sbjct: 424 CNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQC 483

Query: 168 SKEFLRKDILIEHKKIHQGIR-FKCD 192
            K F +K IL  H+ IH G + ++C+
Sbjct: 484 GKAFSQKSILTRHQLIHTGRKPYECN 509

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|442759863|gb|JAA72090.1| Putative zinc finger protein [Ixodes ricinus]

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 7/112 (6%)

Query: 89  CQQSYKVGKL---NKILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKE 143
           C Q++    L   + + H G + YKC LCSK + H  +L  HK+ H G + YKC+LC + 
Sbjct: 90  CPQAFAQNSLLRTHNLTHSGEKPYKCKLCSKAFAHISTLINHKRTHSGEKPYKCNLCPRA 149

Query: 144 YFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCDL 193
           + H G L  HK+ H G + +KC LC +EF  K+ LI HK+ H G++ F+C+L
Sbjct: 150 FAHSGGLIYHKRTHTGEKPFKCGLCPQEFAHKNGLIHHKQTHTGVKPFRCEL 201

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|292626254|ref|XP_001346347.3| PREDICTED: zinc finger protein 226-like [Danio rerio]

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 85/173 (49%), Gaps = 18/173 (10%)

Query: 30  LDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKSH-----DSTLKNESDHERRS 84
           ++ P    +K+E  E     +EEN   + +    +E  K H     + TL + S     +
Sbjct: 1   MNDPETSGIKQEDVEERIDLIEENKEIEGL----IELAKKHHDVNIEETLTSASWPSGET 56

Query: 85  INYNCQQSYKVGKLNKILHRGIR-------YKCDLCSKEYFHKGSLTEHKKRHQGIR-YK 136
           I Y C Q  +     + L+  I+       Y CDLC K + +KG+L EH KRH G R Y 
Sbjct: 57  ICYICPQCGRSFSCEQSLNLHIQFHNEVKPYACDLCEKIFSNKGNLKEHMKRHTGERPYM 116

Query: 137 CDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR 188
           CD C K + HKG L  H KIH G + Y CN C K F +K I  +H KIH G R
Sbjct: 117 CDQCGKSFAHKGNLNAHMKIHTGEKPYACNECGKRFKQKQIFNDHIKIHTGER 169

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|158260627|dbj|BAF82491.1| unnamed protein product [Homo sapiens]

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T  ++S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCDKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|254281232|ref|NP_001156863.1| zinc finger and SCAN domain-containing protein 12 [Homo sapiens]

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 101/184 (54%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQ---SYKVGKL--NKILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++   S+    L  ++ +H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|40788255|dbj|BAA24856.2| KIAA0426 [Homo sapiens]

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 383 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 441

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 442 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 501

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 502 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 561

Query: 189 FKCD 192
           ++CD
Sbjct: 562 YQCD 565

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|256085594|ref|XP_002579002.1| zinc finger protein [Schistosoma mansoni] gi|353233177|emb|CCD80532.1| putative zinc finger protein [Schistosoma mansoni]

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 65/96 (67%), Gaps = 3/96 (3%)

Query: 100 KILHRGIRYKCDLCSKEYFHKGSLTEHKKR-HQGIRYKCDLCSKEYFHKGYLTDH-KKIH 157
           K++H+GIR+ C++C+K++  KG+L  H K  H+GIRY C+ C +++  K  L  H K IH
Sbjct: 234 KVIHQGIRFICNVCNKQFAFKGNLDRHHKNIHEGIRYACNRCDRKFTTKYDLIGHIKVIH 293

Query: 158 QGIRYKCNLCSKEFLRKDILIEH-KKIHQGIRFKCD 192
           +G  Y+C+ C+++F  K  L EH + +H G+RF C+
Sbjct: 294 EGTEYRCDQCNRKFTSKANLNEHLRSVHTGVRFACE 329

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|11135560|sp|O43309.1|ZSC12_HUMAN RecName: Full=Zinc finger and SCAN domain-containing protein 12; AltName: Full=Zinc finger protein 305; AltName: Full=Zinc finger protein 96 gi|27371193|gb|AAH41661.1| Zinc finger and SCAN domain containing 12 [Homo sapiens] gi|119623566|gb|EAX03161.1| zinc finger protein 96, isoform CRA_a [Homo sapiens] gi|119623567|gb|EAX03162.1| zinc finger protein 96, isoform CRA_a [Homo sapiens] gi|168267360|dbj|BAG09736.1| zinc finger and SCAN domain-containing protein 12 [synthetic construct]

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|146328578|sp|A1YEP8.1|ZSC12_GORGO RecName: Full=Zinc finger and SCAN domain-containing protein 12; AltName: Full=Zinc finger protein 96 gi|120974013|gb|ABM46616.1| ZNF96 [Gorilla gorilla]

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 22  FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
           F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct: 374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query: 78  SDHERRSINYNCQQSYKVGKLNKIL-----HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
            +   +   Y C++  K    + ++     H G + YKCD+C K +  + SLTEH++ H 
Sbjct: 433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query: 132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
           G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct: 493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query: 189 FKCD 192
           ++CD
Sbjct: 553 YQCD 556

Source: Gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395537815|ref|XP_003770885.1| PREDICTED: zinc finger protein 84-like [Sarcophilus harrisii]

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 102 LHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
           +H G + YKC  C K +  +GSLTEH+K H G + Y CD C K +  KG LT+H+KIH G
Sbjct: 413 IHSGEKPYKCSECGKAFIQRGSLTEHQKTHSGEKPYVCDKCGKAFTQKGSLTEHQKIHSG 472

Query: 160 IR-YKCNLCSKEFLRKDILIEHKKIHQG 186
            + +KC+ C K F RK  L EH+KIH G
Sbjct: 473 EKPFKCSECGKAFPRKGKLNEHQKIHTG 500

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
UNIPROTKB|O43309	604	ZSCAN12 "Zinc finger and SCAN	0.880	0.281	0.342	4.2e-21
UNIPROTKB|F1S1R6	610	ZSCAN12 "Uncharacterized prote	0.880	0.278	0.331	4.1e-20
UNIPROTKB|Q08E61	613	ZSCAN12 "Zinc finger and SCAN	0.880	0.277	0.326	6.8e-20
UNIPROTKB|F1PFL5	609	ZSCAN12 "Uncharacterized prote	0.880	0.279	0.320	1.4e-19
UNIPROTKB|Q96PE6	472	ZIM3 "Zinc finger imprinted 3"	0.683	0.279	0.340	5.4e-19
UNIPROTKB|F1SU63	428	ZNF2 "Uncharacterized protein"	0.699	0.315	0.349	1.1e-18
UNIPROTKB|Q9H4T2	348	ZSCAN16 "Zinc finger and SCAN	0.979	0.543	0.298	1.4e-18
ZFIN|ZDB-GENE-030131-4589	449	zgc:174263 "zgc:174263" [Danio	0.538	0.231	0.415	1.7e-18
UNIPROTKB|J9NS60	426	ZNF2 "Uncharacterized protein"	0.792	0.359	0.313	1.8e-18
UNIPROTKB|Q3ZBI4	348	ZSCAN16 "Uncharacterized prote	0.984	0.545	0.275	2.3e-18

UNIPROTKB|O43309 ZSCAN12 "Zinc finger and SCAN domain-containing protein 12" [Homo sapiens (taxid:9606)]

 Score = 256 (95.2 bits), Expect = 4.2e-21, P = 4.2e-21
 Identities = 63/184 (34%), Positives = 101/184 (54%)

Query:    22 FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
             F  IK    D PY+ T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct:   374 FHHIKIHTRDKPYQCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 432

Query:    78 SDHERRSINYNCQQ---SYKVGKL--NKILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
              +   +   Y C++   S+    L  ++ +H G + YKCD+C K +  + SLTEH++ H 
Sbjct:   433 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHT 492

Query:   132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
             G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct:   493 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 552

Query:   189 FKCD 192
             ++CD
Sbjct:   553 YQCD 556

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1S1R6 ZSCAN12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
 Identities = 61/184 (33%), Positives = 99/184 (53%)

Query:    22 FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
             F  +K    D PY  T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct:   380 FHHLKIHTRDKPYHCTQCNKSFSRRSI-LTQHQGVHTGAKPYECNECGKAFVYNSSLVSH 438

Query:    78 SDHERRSINYNCQQ---SYKVGKL--NKILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
              +   +   Y C++   S+    L  ++ +H G + YKCD+C K +  + SL EH++ H 
Sbjct:   439 QEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCGKAFIQRTSLIEHQRIHT 498

Query:   132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
             G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct:   499 GERPYKCDTCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 558

Query:   189 FKCD 192
             ++CD
Sbjct:   559 YQCD 562

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q08E61 ZSCAN12 "Zinc finger and SCAN domain containing 12" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
 Identities = 60/184 (32%), Positives = 98/184 (53%)

Query:    22 FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS--HDSTLKNE 77
             F  +K    D PY  T   +S+   SI + ++ G    A   +C E  K+  ++S+L + 
Sbjct:   376 FHHLKIHTRDKPYHCTQCNKSFSRRSI-LTQHQGVHTGAKPYECSECGKAFVYNSSLVSH 434

Query:    78 SDHERRSINYNCQQ---SYKVGKL--NKILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
              +   +   Y C++   S+    L  ++ +H G + YKCD+C K +  + SL EH++ H 
Sbjct:   435 QEIHHKEKCYQCKECGKSFSQSGLTQHQRIHNGEKPYKCDVCGKAFIQRTSLIEHQRIHT 494

Query:   132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
             G R Y+CD C K +  +  L +H+K+H G R YKCN C   F     LI+H++IH G + 
Sbjct:   495 GERPYQCDKCGKAFTQRSVLKEHQKVHTGERPYKCNECGNAFRGITSLIQHQRIHTGEKP 554

Query:   189 FKCD 192
             ++CD
Sbjct:   555 YQCD 558

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PFL5 ZSCAN12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 59/184 (32%), Positives = 97/184 (52%)

Query:    22 FRVIKREPLDIPYEVTVKEESYEGDSINVEENNG--NDAVTRDCLEFFKS---HDSTLKN 76
             F  +K    D PY  T   +S+   SI + ++ G    A   +C +  K+   + S + +
Sbjct:   372 FHHLKIHTRDKPYHCTQCNKSFSRHSI-LTQHQGVHTGAKPYECSKCGKAFVYNSSLISH 430

Query:    77 ESDHERRSINY--NCQQSYKVGKL--NKILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQ 131
             +  H +   +    C +S+    L  ++ +H G + YKCD+C K +  + SL EH++ H 
Sbjct:   431 QEIHHKEKCHQCKECGKSFSQSGLAQHQRIHTGEKPYKCDVCGKAFIQRTSLREHQRIHT 490

Query:   132 GIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR- 188
             G R YKCD C K +  +  LT+H++IH G R YKC+ C   F     LI+H++IH G + 
Sbjct:   491 GERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKP 550

Query:   189 FKCD 192
             ++CD
Sbjct:   551 YQCD 554

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q96PE6 ZIM3 "Zinc finger imprinted 3" [Homo sapiens (taxid:9606)]

 Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
 Identities = 48/141 (34%), Positives = 82/141 (58%)

Query:    61 RDCLEFFKSHDSTLKNESDHE-RRSINYN-CQQSYKVGKL---NKILHRGIR-YKCDLCS 114
             + C + F    S + +E  H  ++S   N C++S++       +K +H G + ++C  C 
Sbjct:   254 KTCGKAFSWKSSCINHEKIHNAKKSYQCNECEKSFRQNSTLIQHKKVHTGQKPFQCTDCG 313

Query:   115 KEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFL 172
             K + +K  L +H++ H G + YKC +C K +  K  + DH+KIH G R Y+C+LC   F+
Sbjct:   314 KAFIYKSDLVKHQRIHTGEKPYKCSICEKAFSQKSNVIDHEKIHTGKRAYECDLCGNTFI 373

Query:   173 RKDILIEHKKIHQGIR-FKCD 192
             +K  LI+HKKIH G + ++C+
Sbjct:   374 QKKNLIQHKKIHTGEKPYECN 394

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1SU63 ZNF2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 230 (86.0 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 51/146 (34%), Positives = 80/146 (54%)

Query:    57 DAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKV----GKLNKIL--HRGIR-YK 109
             D   RDC + F  H S ++++  H      Y+C +  K       L++ L  H G   Y+
Sbjct:   175 DQECRDCGKTFFDHSSLIRHQRTHTGEK-PYDCPECGKAFSHRSSLSRHLMSHTGESPYE 233

Query:   110 CDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLC 167
             C+ C K +F + SLT H++ H G + +KC+ C K +F +  LT H++IH G   Y+CN C
Sbjct:   234 CNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQC 293

Query:   168 SKEFLRKDILIEHKKIHQGIR-FKCD 192
              K F +K IL  H+ IH G + ++C+
Sbjct:   294 GKAFSQKSILTRHQLIHTGRKPYECN 319

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9H4T2 ZSCAN16 "Zinc finger and SCAN domain-containing protein 16" [Homo sapiens (taxid:9606)]

 Score = 225 (84.3 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 62/208 (29%), Positives = 102/208 (49%)

Query:     1 MEPKVEESQEHVGASPSLYDPFRVIKREPLDIPYE-VTV----KEESYEGDSINVEENNG 55
             +E +++E  + V  +    D   + K  PL  PYE +TV    K+   E ++    + NG
Sbjct:   119 LERELDEPGKQVPGNSERRD-ILMDKLAPLGRPYESLTVQLHPKKTQLEQEA-GKPQRNG 176

Query:    56 NDAVTRDCLEFFKSHDSTLKNESDHERRS-INYNCQQSYKV-------GKLNKILHRGIR 107
             +   T++  E F+  D     E   E    +N +  Q  K        G+         R
Sbjct:   177 DKTRTKN-EELFQKEDMPKDKEFLGEINDRLNKDTPQHPKSKDIIENEGRSEWQQRERRR 235

Query:   108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
             YKCD C K + H   L++H++ H G + YKCD C K +  + +L  H ++H G++ YKC 
Sbjct:   236 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGVKPYKCK 295

Query:   166 LCSKEFLRKDILIEHKKIHQGIR-FKCD 192
              C K+F  +  LI+H++IH G + ++CD
Sbjct:   296 ECGKDFSGRTGLIQHQRIHTGEKPYECD 323

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

ZFIN|ZDB-GENE-030131-4589 zgc:174263 "zgc:174263" [Danio rerio (taxid:7955)]

 Score = 229 (85.7 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 47/113 (41%), Positives = 63/113 (55%)

Query:    87 YNCQQSYKVGKLNKILHRGIR-----YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLC 140
             + CQ+S+   K + + H  I      + CD C K + HK SL  H+K H G+R + C LC
Sbjct:   144 HQCQKSFTC-KDHLLHHYRIHTVEKPFPCDECGKSFIHKQSLKNHQKVHSGLRPFVCTLC 202

Query:   141 SKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKC 191
              K Y HK  LTDH +IH G + + C LC K F  K  L+ H KIH G++ F C
Sbjct:   203 GKSYIHKDNLTDHMRIHTGEKPHTCKLCGKSFTHKGSLLHHMKIHTGLKPFTC 255

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|J9NS60 ZNF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 228 (85.3 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 52/166 (31%), Positives = 90/166 (54%)

Query:    39 KEESYEGDSINVEEN--NGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKV- 95
             ++E+ + +S  ++++   G D    +C + F  H S ++++  H      Y+C +  K  
Sbjct:   153 QKENLQQESTPLKKSLTKGRDQECSNCGKTFFDHSSLIRHQRTHTGEK-PYDCHECGKAF 211

Query:    96 ---GKLNKIL--HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKG 148
                  L++ L  H G   Y+C+ C K +F + SLT H++ H G + +KC  C K +F + 
Sbjct:   212 SHRSSLSRHLMSHTGESPYECNACGKAFFDRSSLTVHQRIHTGEKPFKCSECGKAFFDRS 271

Query:   149 YLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
              LT H++IH G   Y+CN C K F +K IL  H+ IH G + ++C+
Sbjct:   272 SLTRHQRIHTGESPYECNQCGKAFSQKSILTRHQLIHTGRKPYECN 317

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q3ZBI4 ZSCAN16 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 223 (83.6 bits), Expect = 2.3e-18, P = 2.3e-18
 Identities = 57/207 (27%), Positives = 107/207 (51%)

Query:     1 MEPKVEESQEHVGASPSLYDPFRVIKREPLDIPYE-VTVK---EESYEGDSINVEENNGN 56
             +E +++E ++ V  +    D   + K  PL  P+E +T++   +++ +       + NG+
Sbjct:   119 LERELDEPRKQVPGNSERQDTL-LDKLAPLRRPHESLTIQLHPKKTCQEQKSGEAQRNGD 177

Query:    57 DAVTRDCLEFFKSHDSTLKNE-----SDHERRSI-NY-NCQQSYKVGKLNKILHRGIR-Y 108
             +  T +  E  +  D +   E     +D   + I  Y   + +++   + K   R  R Y
Sbjct:   178 ETKT-NTEELSQKEDKSKDMEFFGKINDRLNKDILQYPESKDAFESEGIFKWQQRKRRCY 236

Query:   109 KCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNL 166
             KCD C K + H   L++H++ H G + YKCD C K +  + +L  H ++H G++ YKC  
Sbjct:   237 KCDDCGKSFSHSSDLSKHRRTHTGEKPYKCDECGKSFIQRSHLIGHHRVHTGVKPYKCKE 296

Query:   167 CSKEFLRKDILIEHKKIHQGIR-FKCD 192
             C K+F  +  LI+H++IH G + ++CD
Sbjct:   297 CGKDFSGRTGLIQHQRIHTGEKPYECD 323

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.91
KOG1074|consensus	958		99.6
KOG3608|consensus	467		99.57
KOG3576|consensus	267		99.57
KOG3576|consensus	267		99.53
KOG1074|consensus	958		99.52
KOG3623|consensus	1007		99.5
KOG3608|consensus	467		99.47
KOG3623|consensus	1007		99.46
PHA00733	128	hypothetical protein	99.09
PHA02768	55	hypothetical protein; Provisional	99.08
PLN03086	567	PRLI-interacting factor K; Provisional	99.06
PHA02768	55	hypothetical protein; Provisional	98.89
PLN03086	567	PRLI-interacting factor K; Provisional	98.86
PHA00733	128	hypothetical protein	98.81
KOG3993|consensus	500		98.67
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.65
PHA00616	44	hypothetical protein	98.64
KOG3993|consensus	500		98.61
PHA00732	79	hypothetical protein	98.38
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.36
PHA00616	44	hypothetical protein	98.27
PHA00732	79	hypothetical protein	98.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.16
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.09
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.95
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.93
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.81
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.8
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.71
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.57
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.52
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.46
smart00355	26	ZnF_C2H2 zinc finger.	97.42
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.4
smart00355	26	ZnF_C2H2 zinc finger.	96.96
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.94
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.76
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.74
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.71
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.59
PRK04860	160	hypothetical protein; Provisional	96.49
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.47
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.15
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.83
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.83
PRK04860	160	hypothetical protein; Provisional	95.56
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.02
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.08
KOG1146|consensus	1406		92.93
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.92
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.01
KOG2186|consensus	276		90.86
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.19
COG5048	467	FOG: Zn-finger [General function prediction only]	90.05
COG5048	467	FOG: Zn-finger [General function prediction only]	89.77
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	88.54
KOG1146|consensus	1406		88.53
KOG2231|consensus	669		87.89
KOG2893|consensus	341		87.14
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.24
KOG2231|consensus	669		85.17
KOG2186|consensus	276		84.82
COG5236	493	Uncharacterized conserved protein, contains RING Z	83.54
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.43
KOG4173|consensus	253		83.06
KOG2482|consensus	423		82.94
COG5236	493	Uncharacterized conserved protein, contains RING Z	82.71
KOG2785|consensus	390		82.68
COG4049	65	Uncharacterized protein containing archaeal-type C	82.49
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	82.16
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	81.02

>KOG2462|consensus

Probab=99.93  E-value=1.2e-26  Score=168.75  Aligned_cols=129  Identities=19%  Similarity=0.431  Sum_probs=115.0

Q ss_pred             cCCCCcccchhHhhccCchhhccccccccc--CCCCccCCCCccc-------chhhhhhcCCCceecccccccccChhHH
Q psy13164         53 NNGNDAVTRDCLEFFKSHDSTLKNESDHER--RSINYNCQQSYKV-------GKLNKILHRGIRYKCDLCSKEYFHKGSL  123 (193)
Q Consensus        53 ~~~~~~~c~~c~~~f~~~~~~~~h~~~~~~--~~~~~~C~~c~~~-------~~~~~~~~~~~~~~C~~C~~~f~~~~~l  123 (193)
                      .....+.|..|++.+.+...|.+|.+.|..  ..+.+.|..|+++       ..|.++|.  .++.|.+||+.|.+..-|
T Consensus       126 ~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  126 AKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             ccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHh
Confidence            355678899999999999999999998876  3456999999985       45667775  569999999999999999


Q ss_pred             HHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHH
Q psy13164        124 TEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       124 ~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      +-|+++|+|+ ||.|++|+++|...++|+.||++|.+. +|+|..|+++|...+.|.+|...
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999998 999999999999999999999999996 99999999999999999999754

>KOG2462|consensus

Probab=99.91  E-value=3.2e-25  Score=161.42  Aligned_cols=108  Identities=22%  Similarity=0.476  Sum_probs=98.2

Q ss_pred             CCCccCCCCccc-------chhhhhhc---CCCceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHH
Q psy13164         84 SINYNCQQSYKV-------GKLNKILH---RGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDH  153 (193)
Q Consensus        84 ~~~~~C~~c~~~-------~~~~~~~~---~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H  153 (193)
                      ...|+|++|++.       .+|+.+|-   ..+.+.|+.|++.|.....|..|+++|.- ++.|.+|||.|.+.+.|+.|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l-~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL-PCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC-CcccccccccccchHHhhcc
Confidence            344999999984       46666663   35669999999999999999999999996 89999999999999999999


Q ss_pred             HHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        154 KKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       154 ~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+|+|+ ||.|..|+++|..+++|+.|+.+|.+.|.|.|
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC  246 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQC  246 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccC
Confidence            9999998 99999999999999999999999999999887

>KOG1074|consensus

Probab=99.60  E-value=2.2e-16  Score=129.96  Aligned_cols=38  Identities=16%  Similarity=0.223  Sum_probs=32.7

Q ss_pred             CCcccchhHhhccCchhhcccccccccCCCCccCCCCcc
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYK   94 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~   94 (193)
                      .+.+|.+|.++|.+.+.|..|.+.|.. ++||+|.+|+.
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTG-ERPfqCnvCG~  389 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTG-ERPFQCNVCGN  389 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCC-CCCeeeccccc
Confidence            455799999999999999999988874 88999999974

>KOG3608|consensus

Probab=99.57  E-value=3e-15  Score=112.80  Aligned_cols=130  Identities=20%  Similarity=0.368  Sum_probs=93.8

Q ss_pred             CCcccchhHhhccCchhhcccccccccCCCCccCCCCcc-------cchhhhh-hcCCCceecccccccccChhHHHHHH
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYK-------VGKLNKI-LHRGIRYKCDLCSKEYFHKGSLTEHK  127 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~-------~~~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~h~  127 (193)
                      .+|.|..|.+-|.++..|..|+..|-   ..|+|+.|+.       +..|++. |...+||+|+.|+..|.+...|.+|.
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHv---n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~  312 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHV---NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHV  312 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhh---hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHH
Confidence            35666666666666666666665553   2366776654       3455544 34467888888888888888888888


Q ss_pred             HhhCCcceeccc--cchhccChhHHHHHHHHhC-Cc---ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        128 KRHQGIRYKCDL--CSKEYFHKGYLTDHKKIHQ-GI---RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       128 ~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~---~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ..|...-|.|..  |...|.+...+.+|++-+. |.   +|.|-.|++.|++..+|.+|++.-+|-+
T Consensus       313 ~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  313 QVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             HhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhccc
Confidence            888865688877  8888888888888887654 43   6888889999988888888887655544

>KOG3576|consensus

Probab=99.57  E-value=7.6e-16  Score=107.78  Aligned_cols=111  Identities=26%  Similarity=0.480  Sum_probs=86.7

Q ss_pred             CCCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-
Q psy13164         55 GNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-  133 (193)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-  133 (193)
                      ...+.|..|++.|.-...|.+|++-|..                      -+.+.|..||+.|.....|++|+++|+|. 
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~----------------------vkr~lct~cgkgfndtfdlkrh~rthtgvr  172 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSD----------------------VKRHLCTFCGKGFNDTFDLKRHTRTHTGVR  172 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccH----------------------HHHHHHhhccCcccchhhhhhhhccccCcc
Confidence            3455566666666555555555554442                      34478999999999999999999999998 


Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc------------ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI------------RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~------------~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||.|..|+++|++.-.|..|++.-+|.            -|.|..||..-.....+..|+..|+.-
T Consensus       173 pykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  173 PYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             ccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            899999999999999999999865553            288999999988888899999887653

>KOG3576|consensus

Probab=99.53  E-value=1.6e-15  Score=106.12  Aligned_cols=82  Identities=32%  Similarity=0.630  Sum_probs=75.9

Q ss_pred             CCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHH
Q psy13164        105 GIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKK  182 (193)
Q Consensus       105 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~  182 (193)
                      ...|.|..|++.|.....|.+|++.|... .+.|..||+.|.....|++|+++|+|. ||+|..|+++|+++..|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            34599999999999999999999999987 799999999999999999999999998 9999999999999999999987


Q ss_pred             HcCC
Q psy13164        183 IHQG  186 (193)
Q Consensus       183 ~h~~  186 (193)
                      .-+|
T Consensus       195 kvhg  198 (267)
T KOG3576|consen  195 KVHG  198 (267)
T ss_pred             HHcC
Confidence            5333

>KOG1074|consensus

Probab=99.52  E-value=3.3e-15  Score=123.22  Aligned_cols=54  Identities=24%  Similarity=0.535  Sum_probs=50.3

Q ss_pred             eccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        136 KCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       136 ~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      .|..||+.|.+++.|..|+++|+|. ||.|.+|++.|..+.+|+.||.+|.+..|
T Consensus       881 ~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  881 VCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             hhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCC
Confidence            8999999999999999999999997 99999999999999999999999988664

>KOG3623|consensus

Probab=99.50  E-value=4.5e-15  Score=120.83  Aligned_cols=106  Identities=24%  Similarity=0.446  Sum_probs=85.1

Q ss_pred             cccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCC-----
Q psy13164         58 AVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG-----  132 (193)
Q Consensus        58 ~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-----  132 (193)
                      ..|.+|+..+....++..|..-.+.+.                    +..|.|..|..+|.+...|.+||.+|..     
T Consensus       211 ltcpycdrgykrltslkeHikyrhekn--------------------e~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa  270 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKN--------------------EPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQA  270 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhC--------------------CCCCcchhhhhhhhhHHHHHHHHHhhcCCCccc
Confidence            356666666666556655544433211                    2238899999999999999999998853     


Q ss_pred             ---------cceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHH
Q psy13164        133 ---------IRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       133 ---------~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                               +.|+|.+|||+|..+..|+-|+|+|.|+ ||.|+.|.++|..+..+..|+..
T Consensus       271 ~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  271 ISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence                     2599999999999999999999999998 99999999999999998888753

>KOG3608|consensus

Probab=99.47  E-value=3.7e-14  Score=106.96  Aligned_cols=139  Identities=22%  Similarity=0.372  Sum_probs=88.4

Q ss_pred             CCCCcccchhHhhccCchhhccccccccc-CCCCccCCCCcccch---hhhhhcCC--CceecccccccccChhHHHHHH
Q psy13164         54 NGNDAVTRDCLEFFKSHDSTLKNESDHER-RSINYNCQQSYKVGK---LNKILHRG--IRYKCDLCSKEYFHKGSLTEHK  127 (193)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~~~~h~~~~~~-~~~~~~C~~c~~~~~---~~~~~~~~--~~~~C~~C~~~f~~~~~l~~h~  127 (193)
                      ++....|..||..|++...+..|.+.... ...+|.|..|.+.+.   ..+.|...  ..|+|+.|+.+....+.|..|+
T Consensus       204 ~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~  283 (467)
T KOG3608|consen  204 NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHI  283 (467)
T ss_pred             CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHH
Confidence            33444577777777766666666554432 234577777766432   22222221  2377777777777777777777


Q ss_pred             Hh-hCCc-ceeccccchhccChhHHHHHHHHhCCccccccc--CcccccChHHHHHHHHHcC-CCC--CCCC
Q psy13164        128 KR-HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNL--CSKEFLRKDILIEHKKIHQ-GIR--FKCD  192 (193)
Q Consensus       128 ~~-h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~F~~~~~L~~H~~~h~-~~~--~~~c  192 (193)
                      +. |... ||+|..|.+.|.+.+.|.+|..+|...-|+|..  |..+|++...|++|++-++ |..  +|.|
T Consensus       284 r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~C  355 (467)
T KOG3608|consen  284 RYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYAC  355 (467)
T ss_pred             HhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceee
Confidence            65 4443 777877777777777777777777754677776  7777777777777776544 533  4554

>KOG3623|consensus

Probab=99.46  E-value=1.4e-14  Score=118.03  Aligned_cols=75  Identities=37%  Similarity=0.799  Sum_probs=72.2

Q ss_pred             ceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHH
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHK  181 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~  181 (193)
                      .|.|+.|+++|...+.|.+|.--|+|. ||+|.+|.|+|..+..|.-|+|.|.|+ ||+|..|+++|..+..+..||
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            499999999999999999999999998 999999999999999999999999998 999999999999999988886

>PHA00733 hypothetical protein

Probab=99.09  E-value=8.2e-11  Score=79.05  Aligned_cols=80  Identities=20%  Similarity=0.304  Sum_probs=64.3

Q ss_pred             CceecccccccccChhHHHHH------HHhhCCcceeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHHHH
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEH------KKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIE  179 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h------~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~~  179 (193)
                      +++.|.+|...|.+...|..+      +..+...||.|..|++.|.+...|..|++.| ..+|.|..|+++|.....|..
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~  117 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLD  117 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHH
Confidence            457788888777776655554      3334444899999999999999999999976 347999999999999999999


Q ss_pred             HHHHcCC
Q psy13164        180 HKKIHQG  186 (193)
Q Consensus       180 H~~~h~~  186 (193)
                      |+...++
T Consensus       118 H~~~~h~  124 (128)
T PHA00733        118 HVCKKHN  124 (128)
T ss_pred             HHHHhcC
Confidence            9987665

>PHA02768 hypothetical protein; Provisional

Probab=99.08  E-value=4.5e-11  Score=66.89  Aligned_cols=42  Identities=24%  Similarity=0.555  Sum_probs=29.2

Q ss_pred             eeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDIL  177 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L  177 (193)
                      |.|+.||+.|....+|..|+++|+ .+|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            667777777777777777777776 467777777777665544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.06  E-value=2.9e-10  Score=92.83  Aligned_cols=126  Identities=19%  Similarity=0.344  Sum_probs=82.0

Q ss_pred             CCcccchhHhhccCchhhcccccccccCCCCccCCC--CcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQ--SYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI  133 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~--c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~  133 (193)
                      ....|.-|..... ...+..|.....+  ..-.|+.  |+.+..   .......+.|+.|+..|. ...|..|+..|+ .
T Consensus       406 ~~V~C~NC~~~i~-l~~l~lHe~~C~r--~~V~Cp~~~Cg~v~~---r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H-k  477 (567)
T PLN03086        406 DTVECRNCKHYIP-SRSIALHEAYCSR--HNVVCPHDGCGIVLR---VEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH-E  477 (567)
T ss_pred             CeEECCCCCCccc-hhHHHHHHhhCCC--cceeCCcccccceee---ccccccCccCCCCCCccc-hHHHHHHHHhcC-C
Confidence            3446888876653 3445566544432  2245653  666542   111223367888888875 566888888875 4


Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccC----------hHHHHHHHHHcCCCCCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLR----------KDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~----------~~~L~~H~~~h~~~~~~~c  192 (193)
                      ++.|+ ||+.+ ....|..|+.+|.+. ++.|..|++.|..          .+.|..|..++ |.+++.|
T Consensus       478 pv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        478 PLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             CccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEc
Confidence            78888 88654 557888888888776 8888888888742          35788887775 7777666

>PHA02768 hypothetical protein; Provisional

Probab=98.89  E-value=6.8e-10  Score=62.15  Aligned_cols=43  Identities=23%  Similarity=0.609  Sum_probs=39.4

Q ss_pred             ceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHH
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYL  150 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l  150 (193)
                      .|.|+.||+.|.+..+|..|+++|+ .++.|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            3899999999999999999999999 589999999999877765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.86  E-value=5.2e-09  Score=85.63  Aligned_cols=109  Identities=17%  Similarity=0.357  Sum_probs=82.3

Q ss_pred             ccc--hhHhhccCchhhcccccccccCCCCccCCCCccc------chhhhhhcCCCceecccccccccChhHHHHHHHhh
Q psy13164         59 VTR--DCLEFFKSHDSTLKNESDHERRSINYNCQQSYKV------GKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus        59 ~c~--~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~------~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      .|.  .|+..|. ...+..|          +.|+.|++.      ..|.++++  .++.|+ |+..+ ....|..|+..|
T Consensus       435 ~Cp~~~Cg~v~~-r~el~~H----------~~C~~Cgk~f~~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~th  499 (567)
T PLN03086        435 VCPHDGCGIVLR-VEEAKNH----------VHCEKCGQAFQQGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAST  499 (567)
T ss_pred             eCCcccccceee-ccccccC----------ccCCCCCCccchHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhcc
Confidence            465  3888773 3334444          578888763      45666664  779999 99755 668899999988


Q ss_pred             CCc-ceeccccchhccC----------hhHHHHHHHHhCCcccccccCcccccChHHHHHHHHH
Q psy13164        131 QGI-RYKCDLCSKEYFH----------KGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       131 ~~~-~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      ... ++.|..|++.|..          ...|..|.......++.|..||+.|..+ .|..|+..
T Consensus       500 Cp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        500 CPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             CCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHH
Confidence            877 8999999999852          3589999998755599999999999876 56778754

>PHA00733 hypothetical protein

Probab=98.81  E-value=4.7e-09  Score=70.57  Aligned_cols=56  Identities=23%  Similarity=0.392  Sum_probs=49.4

Q ss_pred             cCCCceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCC
Q psy13164        103 HRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       103 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ++..+|.|..|++.|.+...|..|++.|. .+|.|..|+++|.....|..|+...++
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~-~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYTE-HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcCC-cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            34678999999999999999999999873 379999999999999999999987554

>KOG3993|consensus

Probab=98.67  E-value=1.4e-08  Score=78.86  Aligned_cols=22  Identities=23%  Similarity=0.561  Sum_probs=18.3

Q ss_pred             cccccCcccccChHHHHHHHHH
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      |.|.+|.-.|.++..|.+|...
T Consensus       459 f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  459 FTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             cccccchHhhhcCcchHhHhhh
Confidence            7888888888888888888654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.65  E-value=2.2e-08  Score=47.97  Aligned_cols=24  Identities=42%  Similarity=0.827  Sum_probs=18.0

Q ss_pred             HHHHHHHHhCCc-ccccccCccccc
Q psy13164        149 YLTDHKKIHQGI-RYKCNLCSKEFL  172 (193)
Q Consensus       149 ~l~~H~~~h~~~-~~~C~~C~~~F~  172 (193)
                      +|.+|+++|+|+ ||.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            467777777776 778888877775

...

>PHA00616 hypothetical protein

Probab=98.64  E-value=1.5e-08  Score=54.02  Aligned_cols=32  Identities=25%  Similarity=0.278  Sum_probs=18.8

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ||+|..||+.|...+.|..|++.|+|++++.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            35566666666666666666666666555443

>KOG3993|consensus

Probab=98.61  E-value=6.8e-09  Score=80.59  Aligned_cols=79  Identities=29%  Similarity=0.617  Sum_probs=61.6

Q ss_pred             eecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc--------------------------
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI--------------------------  160 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------  160 (193)
                      |.|..|...|.....|.+|.-.-.-. -|+|++|+|.|+-..+|..|.|.|.-+                          
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            77888888888888777776443333 478888888888888888887777421                          


Q ss_pred             --------ccccccCcccccChHHHHHHHHHcCC
Q psy13164        161 --------RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 --------~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                              -|.|..|++.|.....|+.|+.+|+.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                    18999999999999999999988763

>PHA00732 hypothetical protein

Probab=98.38  E-value=2.1e-07  Score=57.00  Aligned_cols=48  Identities=29%  Similarity=0.551  Sum_probs=31.4

Q ss_pred             ceecccccccccChhHHHHHHHh-hCCcceeccccchhccChhHHHHHHHHhCC
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKR-HQGIRYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.+...|..|++. |.  ++.|..|++.|.   .+..|.+++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC---ChhhhhcccCC
Confidence            36677777777777777777764 43  346777777776   36666655433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.36  E-value=3.4e-07  Score=43.77  Aligned_cols=24  Identities=38%  Similarity=0.841  Sum_probs=19.2

Q ss_pred             HHHHHHHhhCCc-ceeccccchhcc
Q psy13164        122 SLTEHKKRHQGI-RYKCDLCSKEYF  145 (193)
Q Consensus       122 ~l~~h~~~h~~~-~~~C~~C~~~f~  145 (193)
                      +|..|+++|+++ ||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            477888888887 788888888875

...

>PHA00616 hypothetical protein

Probab=98.27  E-value=4e-07  Score=48.61  Aligned_cols=38  Identities=16%  Similarity=0.218  Sum_probs=26.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEF  171 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F  171 (193)
                      ||+|+.||+.|...+.|..|++.|+|. ++.|..--..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            567778888888788888888777776 66665433333

>PHA00732 hypothetical protein

Probab=98.26  E-value=6e-07  Score=54.97  Aligned_cols=47  Identities=28%  Similarity=0.498  Sum_probs=39.2

Q ss_pred             ceeccccchhccChhHHHHHHHH-hCCcccccccCcccccChHHHHHHHHHcC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKI-HQGIRYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|..|++.|.+...|..|++. |.  ++.|+.|++.|.+   |..|.++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~~---l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYRR---LNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeCC---hhhhhcccC
Confidence            58899999999999999999984 65  3689999999984   777876543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.16  E-value=1.5e-06  Score=40.29  Aligned_cols=23  Identities=43%  Similarity=0.847  Sum_probs=15.2

Q ss_pred             cccccCcccccChHHHHHHHHHc
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      |.|+.|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666777777777777666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.09  E-value=6.1e-06  Score=46.88  Aligned_cols=48  Identities=29%  Similarity=0.595  Sum_probs=27.9

Q ss_pred             eeccccchhccChhHHHHHHHH-hCCc--ccccccCcccccChHHHHHHHHHcC
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKI-HQGI--RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~-h~~~--~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      |.|++|++ ..+...|..|... |...  .+.|++|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            56667776 3445566666553 4432  566777766543  36666766644

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.95  E-value=6.8e-06  Score=37.96  Aligned_cols=22  Identities=36%  Similarity=0.801  Sum_probs=12.5

Q ss_pred             eeccccchhccChhHHHHHHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4555555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.93  E-value=6.8e-06  Score=52.73  Aligned_cols=73  Identities=21%  Similarity=0.436  Sum_probs=21.1

Q ss_pred             ecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHHHHHHHHc
Q psy13164        109 KCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       109 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      +|..|+..|.+...|..|+...++....   ....+.....+..+++.-....+.|..|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4889999999999999999765553211   111222333444444433333689999999999999999999874

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.81  E-value=1.7e-05  Score=36.81  Aligned_cols=23  Identities=35%  Similarity=0.824  Sum_probs=13.4

Q ss_pred             cccccCcccccChHHHHHHHHHc
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      |.|+.|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.80  E-value=1.3e-05  Score=38.62  Aligned_cols=25  Identities=36%  Similarity=0.700  Sum_probs=18.4

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777777664

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.71  E-value=7e-05  Score=42.47  Aligned_cols=48  Identities=29%  Similarity=0.582  Sum_probs=38.3

Q ss_pred             eecccccccccChhHHHHHHHh-hCCc--ceeccccchhccChhHHHHHHHHhC
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKR-HQGI--RYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~-h~~~--~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      |.|+.|++ ..+...|..|... |...  .+.|++|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            89999999 5567789999765 5554  599999998654  48999998754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.57  E-value=7.1e-05  Score=34.57  Aligned_cols=23  Identities=30%  Similarity=0.804  Sum_probs=11.8

Q ss_pred             eeccccchhccChhHHHHHHHHh
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      |.|+.|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45555555555555555555544

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.52  E-value=6.4e-05  Score=41.07  Aligned_cols=29  Identities=17%  Similarity=0.252  Sum_probs=18.5

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      |..|++|+..+.+..+|++|+.++++.+|
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            77788888888777788888777776664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.46  E-value=0.0001  Score=47.22  Aligned_cols=24  Identities=25%  Similarity=0.225  Sum_probs=0.0

Q ss_pred             ccchhHhhccCchhhccccccccc
Q psy13164         59 VTRDCLEFFKSHDSTLKNESDHER   82 (193)
Q Consensus        59 ~c~~c~~~f~~~~~~~~h~~~~~~   82 (193)
                      +|..|+..|.+...+..|+...+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~   24 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG   24 (100)
T ss_dssp             ------------------------
T ss_pred             Cccccccccccccccccccccccc
Confidence            488999999999999999877664

>smart00355 ZnF_C2H2 zinc finger

Probab=97.42  E-value=0.00014  Score=34.09  Aligned_cols=24  Identities=42%  Similarity=0.796  Sum_probs=17.3

Q ss_pred             cccccCcccccChHHHHHHHHHcC
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      |.|..|++.|...+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777777654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.40  E-value=0.00012  Score=35.09  Aligned_cols=23  Identities=39%  Similarity=0.888  Sum_probs=11.7

Q ss_pred             eecccccccccChhHHHHHHHhh
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      |.|..|++.|.+...|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            44555555555555555555444

>smart00355 ZnF_C2H2 zinc finger

Probab=96.96  E-value=0.00072  Score=31.56  Aligned_cols=24  Identities=33%  Similarity=0.753  Sum_probs=15.1

Q ss_pred             eeccccchhccChhHHHHHHHHhC
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356666666666666666666553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.94  E-value=0.00024  Score=53.92  Aligned_cols=22  Identities=27%  Similarity=0.668  Sum_probs=18.5

Q ss_pred             cccccccCcccccChHHHHHHH
Q psy13164        160 IRYKCNLCSKEFLRKDILIEHK  181 (193)
Q Consensus       160 ~~~~C~~C~~~F~~~~~L~~H~  181 (193)
                      +||.|.+|++++.+...|+-|.
T Consensus       397 KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         397 KPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceeccccchhhccCccceecc
Confidence            3799999999999988887764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.76  E-value=0.00053  Score=52.16  Aligned_cols=51  Identities=35%  Similarity=0.748  Sum_probs=43.1

Q ss_pred             CCCceeccc--ccccccChhHHHHHHHh-hCC-------------------cceeccccchhccChhHHHHHH
Q psy13164        104 RGIRYKCDL--CSKEYFHKGSLTEHKKR-HQG-------------------IRYKCDLCSKEYFHKGYLTDHK  154 (193)
Q Consensus       104 ~~~~~~C~~--C~~~f~~~~~l~~h~~~-h~~-------------------~~~~C~~C~~~f~~~~~l~~H~  154 (193)
                      +++||+|++  |.+++.+...|+-|+.- |..                   +||+|.+|+|.+.+...|+-|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            358999987  99999999999999764 310                   3899999999999999999884

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.74  E-value=0.00089  Score=31.30  Aligned_cols=22  Identities=27%  Similarity=0.753  Sum_probs=14.7

Q ss_pred             cccccCcccccChHHHHHHHHH
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      |.|..|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566777777777777766654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.71  E-value=0.0011  Score=30.72  Aligned_cols=22  Identities=45%  Similarity=0.623  Sum_probs=11.6

Q ss_pred             cccccCcccccChHHHHHHHHHc
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      |+|+.|+.... ...|..|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            45666665555 55666666554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.59  E-value=0.0018  Score=35.54  Aligned_cols=26  Identities=19%  Similarity=0.314  Sum_probs=16.2

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      |..|++|+..+.+..+|.+|+.++++
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhc
Confidence            67777787777777777777765544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.49  E-value=0.0019  Score=45.09  Aligned_cols=37  Identities=27%  Similarity=0.792  Sum_probs=29.7

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccCh
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRK  174 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~  174 (193)
                      +|.|. |++   ....+.+|.++|++. +|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            68887 887   567788888888887 79999998887643

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.47  E-value=0.0019  Score=30.17  Aligned_cols=22  Identities=27%  Similarity=0.744  Sum_probs=14.5

Q ss_pred             eeccccchhccChhHHHHHHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      |.|..|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566677777777777666654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.15  E-value=0.0041  Score=28.71  Aligned_cols=21  Identities=43%  Similarity=0.599  Sum_probs=9.3

Q ss_pred             eeccccchhccChhHHHHHHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      |.|+.|+.... ...|..|++.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            34555554444 4455555544

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.83  E-value=0.0083  Score=28.08  Aligned_cols=20  Identities=40%  Similarity=0.908  Sum_probs=14.1

Q ss_pred             ccccCcccccChHHHHHHHHH
Q psy13164        163 KCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       163 ~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      .|+.||+.| ....|..|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            577788888 55677777654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.83  E-value=0.0023  Score=30.53  Aligned_cols=22  Identities=32%  Similarity=0.664  Sum_probs=15.7

Q ss_pred             cccccCcccccChHHHHHHHHH
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.56  E-value=0.009  Score=41.78  Aligned_cols=37  Identities=27%  Similarity=0.772  Sum_probs=31.9

Q ss_pred             ceecccccccccChhHHHHHHHhhCCc-ceeccccchhccCh
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHK  147 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~  147 (193)
                      +|.|. |+.   ...++.+|.++|.+. +|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            59998 987   677899999999997 89999999988654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.02  E-value=0.0054  Score=29.22  Aligned_cols=22  Identities=32%  Similarity=0.659  Sum_probs=14.9

Q ss_pred             eeccccchhccChhHHHHHHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      |.|..|++.|.+...+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777766653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.08  E-value=0.037  Score=27.88  Aligned_cols=23  Identities=26%  Similarity=0.459  Sum_probs=17.2

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            56788888888877777777653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=92.93  E-value=0.023  Score=51.27  Aligned_cols=129  Identities=14%  Similarity=0.131  Sum_probs=84.1

Q ss_pred             cCCCCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhh------hcCCCceecccccccccChhHHHHH
Q psy13164         53 NNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKI------LHRGIRYKCDLCSKEYFHKGSLTEH  126 (193)
Q Consensus        53 ~~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~------~~~~~~~~C~~C~~~f~~~~~l~~h  126 (193)
                      .....++|..|+..++....|..|++..+.....   ..|.....|.+.      -.+.++|.|..|...+..+.+|.+|
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~---~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsih  537 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS---AYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIH  537 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccch---hHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHH
Confidence            3346778888888888888888888774432222   233222222111      1235679999999999999999999


Q ss_pred             HHh--hCC-----------------------------------------c-ceeccccchhccChhHHHHHHHH-hCCc-
Q psy13164        127 KKR--HQG-----------------------------------------I-RYKCDLCSKEYFHKGYLTDHKKI-HQGI-  160 (193)
Q Consensus       127 ~~~--h~~-----------------------------------------~-~~~C~~C~~~f~~~~~l~~H~~~-h~~~-  160 (193)
                      +..  |..                                         + +|.|..|+.......+|+.||.. ++-. 
T Consensus       538 lqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~~  617 (1406)
T KOG1146|consen  538 LQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSSP  617 (1406)
T ss_pred             HHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCCC
Confidence            864  311                                         2 37888888887777788777753 3333 


Q ss_pred             ccccccCcccccChHHHHHHHHHc
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      |.-+-.++..+.....+..+.+.+
T Consensus       618 p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  618 PSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             hHHHhhhcchhhccccccCcCCCC
Confidence            466666777776666666665555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.92  E-value=0.082  Score=26.57  Aligned_cols=23  Identities=22%  Similarity=0.446  Sum_probs=18.1

Q ss_pred             ceeccccchhccChhHHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.01  E-value=0.35  Score=31.47  Aligned_cols=25  Identities=24%  Similarity=0.503  Sum_probs=23.1

Q ss_pred             ccc----ccCcccccChHHHHHHHHHcCC
Q psy13164        162 YKC----NLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       162 ~~C----~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      |.|    ..|+....+...|+.|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            999    9999999999999999998765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2186|consensus

Probab=90.86  E-value=0.19  Score=37.38  Aligned_cols=46  Identities=22%  Similarity=0.535  Sum_probs=32.0

Q ss_pred             eecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHH
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      |.|..||.... +..+..|+.+-++..|.|..|++.|.. ..+..|..
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            67777877543 344666777777767888888888876 56666754

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.19  E-value=0.2  Score=25.07  Aligned_cols=10  Identities=40%  Similarity=1.119  Sum_probs=5.1

Q ss_pred             eecccccccc
Q psy13164        108 YKCDLCSKEY  117 (193)
Q Consensus       108 ~~C~~C~~~f  117 (193)
                      |.|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            4555555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.05  E-value=0.051  Score=43.72  Aligned_cols=54  Identities=28%  Similarity=0.560  Sum_probs=30.2

Q ss_pred             ceecccccccccChhHHHHHHH--hhCCc---ceecc--ccchhccChhHHHHHHHHhCCc
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKK--RHQGI---RYKCD--LCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~--~h~~~---~~~C~--~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ++.|..|...|.....+..|..  .|.+.   ++.|+  .|++.|.....+..|..+|++.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            3555556666666655655555  45443   45555  4666666555555555555543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.77  E-value=0.063  Score=43.19  Aligned_cols=59  Identities=31%  Similarity=0.508  Sum_probs=52.9

Q ss_pred             ceeccccchhccChhHHHHHHH--HhCCc---ccccc--cCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK--IHQGI---RYKCN--LCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~---~~~C~--~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ++.|..|...|.....+..|.+  .|.+.   ++.|+  .|++.|.....+..|..+|++.++..+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            5889999999999999999999  78876   89999  799999999999999999998876543

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=88.54  E-value=0.073  Score=39.68  Aligned_cols=24  Identities=21%  Similarity=0.297  Sum_probs=12.2

Q ss_pred             ceeccccchhccChhHHHHHHHHh
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      ++.|+.||........|..-.|+|
T Consensus       209 ~~PCPKCg~et~eTkdLSmStR~h  232 (314)
T PF06524_consen  209 PIPCPKCGYETQETKDLSMSTRSH  232 (314)
T ss_pred             CCCCCCCCCcccccccceeeeecc
Confidence            566666665554444444333333

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>KOG1146|consensus

Probab=88.53  E-value=0.14  Score=46.46  Aligned_cols=116  Identities=14%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             CcccchhHhhccCchhhccccccccc---CCCCccCCCCcccchhh---hhhcCCCceecccccccccChhHHHHHHHhh
Q psy13164         57 DAVTRDCLEFFKSHDSTLKNESDHER---RSINYNCQQSYKVGKLN---KILHRGIRYKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus        57 ~~~c~~c~~~f~~~~~~~~h~~~~~~---~~~~~~C~~c~~~~~~~---~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      ...|..|...|........+-+....   ....+.|..+..+..-.   .+.....+|.|..|...|.....|..|++. 
T Consensus      1228 gl~~~~~e~~f~~~~~~~~~a~~~~~~~~~sGe~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~k- 1306 (1406)
T KOG1146|consen 1228 GLLPNALEQPFPQEPEPTATAPPKPPELPASGEGECGAVDELLTPSFGISTLDVTHRYLCRQCKMAFDGEAPLTAHQRK- 1306 (1406)
T ss_pred             cccHHhhhcCccCcccccccCCCCCCcCcCCCcchhhhccccccCccceeecccchhHHHHHHHhhhcchhHHHHHHHH-
Confidence            34566677777766666555433211   12225566665542211   122233458888888888888888877621 


Q ss_pred             CCcceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHH
Q psy13164        131 QGIRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       131 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                               |.+.+.......-|+..+... .| |..|...|.....|..|+++
T Consensus      1307 ---------~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~ 1350 (1406)
T KOG1146|consen 1307 ---------FCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRS 1350 (1406)
T ss_pred             ---------HHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHH
Confidence                     112222222222233333332 34 66666666666666666665

>KOG2231|consensus

Probab=87.89  E-value=0.8  Score=39.24  Aligned_cols=116  Identities=16%  Similarity=0.325  Sum_probs=67.8

Q ss_pred             cccchhHhhcc---------------CchhhcccccccccCCCCccCCCCcc----------------cchhhhhh-cCC
Q psy13164         58 AVTRDCLEFFK---------------SHDSTLKNESDHERRSINYNCQQSYK----------------VGKLNKIL-HRG  105 (193)
Q Consensus        58 ~~c~~c~~~f~---------------~~~~~~~h~~~~~~~~~~~~C~~c~~----------------~~~~~~~~-~~~  105 (193)
                      ..|.+|+..|.               +-..|..|+...|..   +.|..|..                +..|++.- .+.
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~  176 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDD  176 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCcc
Confidence            45777777763               455677788766643   55666542                12222111 101


Q ss_pred             C----ceecccccccccChhHHHHHHHhhCCcceecccc------chhccChhHHHHHHHHhCCcccccc--cCc-----
Q psy13164        106 I----RYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLC------SKEYFHKGYLTDHKKIHQGIRYKCN--LCS-----  168 (193)
Q Consensus       106 ~----~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~C~--~C~-----  168 (193)
                      .    .-.|..|...|.....|..|++.++.   .|..|      +..|.....|..|-+.++   |.|.  .|.     
T Consensus       177 ~s~rGhp~C~~C~~~fld~~el~rH~~~~h~---~chfC~~~~~~neyy~~~~dLe~HfR~~H---flCE~~~C~~~~f~  250 (669)
T KOG2231|consen  177 ESCRGHPLCKFCHERFLDDDELYRHLRFDHE---FCHFCDYKTGQNEYYNDYDDLEEHFRKGH---FLCEEEFCRTKKFY  250 (669)
T ss_pred             ccccCCccchhhhhhhccHHHHHHhhcccee---heeecCcccccchhcccchHHHHHhhhcC---ccccccccccceee
Confidence            0    14688899999998989988876655   44444      345666788888888654   4554  343     


Q ss_pred             ccccChHHHHHHHH
Q psy13164        169 KEFLRKDILIEHKK  182 (193)
Q Consensus       169 ~~F~~~~~L~~H~~  182 (193)
                      ..|.....|.+|-+
T Consensus       251 ~~~~~ei~lk~~~~  264 (669)
T KOG2231|consen  251 VAFELEIELKAHNR  264 (669)
T ss_pred             ehhHHHHHHHhhcc
Confidence            23344445555544

>KOG2893|consensus

Probab=87.14  E-value=0.18  Score=37.26  Aligned_cols=41  Identities=32%  Similarity=0.709  Sum_probs=22.0

Q ss_pred             cccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHH
Q psy13164        110 CDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDH  153 (193)
Q Consensus       110 C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H  153 (193)
                      |=.|++.|....-|..|++..   .|+|.+|-|...+...|..|
T Consensus        13 cwycnrefddekiliqhqkak---hfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK---HFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhc---cceeeeehhhhccCCCceee
Confidence            445666666665555554432   35566666555555555444

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.24  E-value=0.44  Score=31.02  Aligned_cols=12  Identities=33%  Similarity=0.708  Sum_probs=5.9

Q ss_pred             ccccccCccccc
Q psy13164        161 RYKCNLCSKEFL  172 (193)
Q Consensus       161 ~~~C~~C~~~F~  172 (193)
                      |..|+.||..|.
T Consensus        26 PivCP~CG~~~~   37 (108)
T PF09538_consen   26 PIVCPKCGTEFP   37 (108)
T ss_pred             CccCCCCCCccC
Confidence            444555555543

The function of members of this family is unknown.

>KOG2231|consensus

Probab=85.17  E-value=1.5  Score=37.64  Aligned_cols=47  Identities=21%  Similarity=0.463  Sum_probs=22.9

Q ss_pred             eeccccchhccChhHHHHHHHHhCCcccccccC------cccccChHHHHHHHHHc
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLC------SKEFLRKDILIEHKKIH  184 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C------~~~F~~~~~L~~H~~~h  184 (193)
                      -.|..|...|.....|.+|++.++   |.|..|      +.-|..-..|..|.+.+
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h---~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH---EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce---eheeecCcccccchhcccchHHHHHhhhc
Confidence            355555555555555555555432   223333      33444445555555543

>KOG2186|consensus

Probab=84.82  E-value=0.7  Score=34.50  Aligned_cols=50  Identities=22%  Similarity=0.419  Sum_probs=39.8

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHHHHHHHHcC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      -|.|..||-... ...+.+|+..-++.-|.|..|++.|.. .....|...-+
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHhccCCeeEEeeccccccc-chhhhhhhhcc
Confidence            478999998765 456778998888888999999999987 66777876433

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=83.54  E-value=0.82  Score=35.80  Aligned_cols=75  Identities=28%  Similarity=0.484  Sum_probs=43.2

Q ss_pred             eeccc--ccccccChhHHHHHHHhhCCcceeccccc---hh------ccChhHHHHHHHHhC-C---c-ccccccCcccc
Q psy13164        108 YKCDL--CSKEYFHKGSLTEHKKRHQGIRYKCDLCS---KE------YFHKGYLTDHKKIHQ-G---I-RYKCNLCSKEF  171 (193)
Q Consensus       108 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~C~~C~---~~------f~~~~~l~~H~~~h~-~---~-~~~C~~C~~~F  171 (193)
                      |.|+.  |..+......|..|.+..++ .+.|.+|-   +.      ..++..|..|.-... +   + --.|..|...|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~-~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~F  230 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG-FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYF  230 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC-cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcccee
Confidence            66754  55555556677777776555 34555443   22      234455565654321 1   1 23577777777


Q ss_pred             cChHHHHHHHHH
Q psy13164        172 LRKDILIEHKKI  183 (193)
Q Consensus       172 ~~~~~L~~H~~~  183 (193)
                      ..-..|..|+|.
T Consensus       231 YdDDEL~~HcR~  242 (493)
T COG5236         231 YDDDELRRHCRL  242 (493)
T ss_pred             cChHHHHHHHHh
Confidence            777777777765

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.43  E-value=1.2  Score=29.19  Aligned_cols=76  Identities=18%  Similarity=0.346  Sum_probs=43.4

Q ss_pred             ceecccccccccChhHHHHHHHhhCC--------cc-------eeccccchhccChhHHHHHHHHhCCcccccccCcccc
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQG--------IR-------YKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEF  171 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~--------~~-------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F  171 (193)
                      |..|+.|+-+......|.+..  |+-        .+       -.|--|...|........-. .-...+|+|+.|...|
T Consensus        15 P~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~~-~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFDE-LKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCcccccccc-cccccceeCCCCCCcc
Confidence            456777777766666665431  111        01       13777888776543211000 1111278888888888


Q ss_pred             cChHHHHHHHHHcC
Q psy13164        172 LRKDILIEHKKIHQ  185 (193)
Q Consensus       172 ~~~~~L~~H~~~h~  185 (193)
                      =..-....|..+|.
T Consensus        92 C~dCD~fiHe~Lh~  105 (112)
T TIGR00622        92 CVDCDVFVHESLHC  105 (112)
T ss_pred             ccccchhhhhhccC
Confidence            77777777777764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG4173|consensus

Probab=83.06  E-value=0.53  Score=34.00  Aligned_cols=73  Identities=18%  Similarity=0.461  Sum_probs=45.6

Q ss_pred             eeccc--ccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCC----------c-cccccc--Cccccc
Q psy13164        108 YKCDL--CSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQG----------I-RYKCNL--CSKEFL  172 (193)
Q Consensus       108 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~-~~~C~~--C~~~F~  172 (193)
                      +.|+.  |...|.....+..|..+-++  -.|..|.+.|.+...|..|+.-.+.          . -|+|-.  |+..|.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFk  157 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFK  157 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhh
Confidence            55655  66667666666666544222  2677777777777777777654322          1 267743  777777


Q ss_pred             ChHHHHHHHH
Q psy13164        173 RKDILIEHKK  182 (193)
Q Consensus       173 ~~~~L~~H~~  182 (193)
                      +...-..|+-
T Consensus       158 T~r~RkdH~I  167 (253)
T KOG4173|consen  158 TSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhHHH
Confidence            7766666654

>KOG2482|consensus

Probab=82.94  E-value=4  Score=32.10  Aligned_cols=56  Identities=29%  Similarity=0.547  Sum_probs=38.5

Q ss_pred             ceeccccchhc-cChhHHHHHHH-HhC---Ccc-------------------cccccCcccccChHHHHHHHHH--cCCC
Q psy13164        134 RYKCDLCSKEY-FHKGYLTDHKK-IHQ---GIR-------------------YKCNLCSKEFLRKDILIEHKKI--HQGI  187 (193)
Q Consensus       134 ~~~C~~C~~~f-~~~~~l~~H~~-~h~---~~~-------------------~~C~~C~~~F~~~~~L~~H~~~--h~~~  187 (193)
                      ..+|..|...+ .+.+.+..|+- .|.   |.|                   +.|-.|.+.|+.+..|+.||+.  |...
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            47888887554 34455666664 332   223                   8899999999999999999986  5443


Q ss_pred             CC
Q psy13164        188 RF  189 (193)
Q Consensus       188 ~~  189 (193)
                      .|
T Consensus       224 nP  225 (423)
T KOG2482|consen  224 NP  225 (423)
T ss_pred             CC
Confidence            34

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=82.71  E-value=1.8  Score=33.98  Aligned_cols=121  Identities=16%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             Ccccc--hhHhhccCchhhcccccccccCCCCccCCCCcc---cch---------hhhhhc----CCCc----eeccccc
Q psy13164         57 DAVTR--DCLEFFKSHDSTLKNESDHERRSINYNCQQSYK---VGK---------LNKILH----RGIR----YKCDLCS  114 (193)
Q Consensus        57 ~~~c~--~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~---~~~---------~~~~~~----~~~~----~~C~~C~  114 (193)
                      .|.|.  .|..+......+..|.+..+..   +.|.+|..   .+.         -.+.|.    .+..    -.|..|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            44443  4555555566777787765543   67777753   111         112221    1111    3588999


Q ss_pred             ccccChhHHHHHHHhhCCcceeccccc----hhccChhHHHHHHHHhCCccccccc--Cc----ccccChHHHHHHHHH
Q psy13164        115 KEYFHKGSLTEHKKRHQGIRYKCDLCS----KEYFHKGYLTDHKKIHQGIRYKCNL--CS----KEFLRKDILIEHKKI  183 (193)
Q Consensus       115 ~~f~~~~~l~~h~~~h~~~~~~C~~C~----~~f~~~~~l~~H~~~h~~~~~~C~~--C~----~~F~~~~~L~~H~~~  183 (193)
                      ..|-.-..|..|++..+..-+.|..-+    .-|.+-..|.+|.+.-   .|.|..  |.    ..|.....|..|+..
T Consensus       228 ~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~---hy~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         228 IYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNA---HYCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             ceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcC---ceEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            999999999999998777434443322    3466677777777632   255543  32    468888888888765

>KOG2785|consensus

Probab=82.68  E-value=3.9  Score=32.56  Aligned_cols=74  Identities=18%  Similarity=0.272  Sum_probs=42.6

Q ss_pred             ceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCcccccccCc---ccccChHHHHHHHHH
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCS---KEFLRKDILIEHKKI  183 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~---~~F~~~~~L~~H~~~  183 (193)
                      |-.|-.|+..+.+...-..||..+++. |.-..  .-......|...+..-.+.-|.|-.|+   +.|.+..+.+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~Hgf-fIPdr--eYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGF-FIPDR--EYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCC-cCCch--HhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            355666777766666666677666652 11000  011222333344443333347888888   888888888888865

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.49  E-value=0.74  Score=25.80  Aligned_cols=25  Identities=12%  Similarity=0.340  Sum_probs=15.5

Q ss_pred             CCceecccccccccChhHHHHHHHh
Q psy13164        105 GIRYKCDLCSKEYFHKGSLTEHKKR  129 (193)
Q Consensus       105 ~~~~~C~~C~~~f~~~~~l~~h~~~  129 (193)
                      +.-++|+.|+..|.....+.+|...
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHhhH
Confidence            3446666666666666666666543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=82.16  E-value=3.8  Score=26.58  Aligned_cols=26  Identities=23%  Similarity=0.447  Sum_probs=22.8

Q ss_pred             ceec----cccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKC----DLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C----~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      .|.|    ..|+..+.+...+..|++.++|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3899    9999999999999999987654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=81.02  E-value=1.9  Score=24.57  Aligned_cols=9  Identities=33%  Similarity=0.899  Sum_probs=5.2

Q ss_pred             ceeccccch
Q psy13164        134 RYKCDLCSK  142 (193)
Q Consensus       134 ~~~C~~C~~  142 (193)
                      +|.|+.||.
T Consensus        48 ~Y~CP~CGF   56 (59)
T PRK14890         48 PYTCPKCGF   56 (59)
T ss_pred             ceECCCCCC
Confidence            566666653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	193
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-08
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-07
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		7e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-04

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           Y C  C K + HK     H   H G+R Y C +C K++  K +L  H KIH GI+ Y+CN
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 166 LCSKEFLRKDILIEH 180
           +C+K F+ +D    H
Sbjct: 70  ICAKRFMWRDSFHRH 84

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           YKC  C K +    +L +H++ H G + YKC  C K +     L  H++ H G + YKC 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 166 LCSKEFLRKDILIEHKKIHQ 185
            C K F R D L  H++ HQ
Sbjct: 65  ECGKSFSRSDHLSRHQRTHQ 84

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           Y C  C K +     L EH++ H G + YKC  C K +  K  LT H++ H G + YKC 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 166 LCSKEFLRKDILIEHKKIHQG 186
            C K F ++  L  H++ H G
Sbjct: 82  ECGKSFSQRANLRAHQRTHTG 102

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 134 RYKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
           RYKCD C K + H   L+ H++ H G + YKC+ C K F+++  LI H ++H G
Sbjct: 18  RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
           YKCD C   + +KG L  HK +H G + Y+CN+C  +F R   L  H +IH G
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +   GSLT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +     LT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +     LT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y+CD   C + +     L  H++RH G++ ++C  C +++    +L  H + H G + + 
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS 96
Query: 164 CNL--CSKEFLRKDILIEHKKIH 184
           C    C K+F R D L+ H  +H
Sbjct: 97  CRWPSCQKKFARSDELVRHHNMH 119

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +    +LT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           + C +C K +    +L+ H   H   R Y C  C K +  K  +  H  IH G + +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 166 LCSKEFLRKDILIEHKKIHQG 186
           +C K F +   LI H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +     LT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 4   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 63
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 64  CDICGRKFARSDERKRHTKIH 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +     LT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +     LT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 164 CNLCSKEFLRKDILIEHKKIH 184
           C++C ++F R D    H KIH
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR----YKCDLCSKEYFHKGYLTDHKKIHQG-IRY 162
           ++C  C K YF K +L EH+ R+   R    + C +C + +  +  L  H   H G + Y
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95
Query: 163 KCNLCSKEFLRKDILIEHK-KIHQG 186
           KC+ CS++F++K  L  H  K+H G
Sbjct: 96  KCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           + C  C + +    +L  H++ H   R Y CD+C K +  + +L DH+ IH   + +KC 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 166 LCSKEFLRKDILIEHKKIH 184
            C K F +   L  HK +H
Sbjct: 78  ECGKGFCQSRTLAVHKTLH 96

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEH-KKIHQG 186
           + C++C++ +  + +L  H + H   + Y C LC++ F R+D+LI H +KIH G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	193
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-11
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	9e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.3 bits (176), Expect = 7e-17
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           +KC++C K +  K  L  H + H G++ YKC  C         L  H +IH   R +KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
           +C         L  H + H G
Sbjct: 69  ICPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
           +KC++C K +  K  L  H + H G++ YKC  C         L +H +IH   R FKC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.4 bits (166), Expect = 1e-15
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           + C +C K +    +L+ H   H   R Y C  C K +  K  +  H  IH G + +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
           +C K F +   LI H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.8 bits (167), Expect = 2e-15
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           + C  C + +    +L  H++ H   R Y CD+C K +  + +L DH+ IH   + +KC 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
            C K F +   L  HK +H  
Sbjct: 78  ECGKGFCQSRTLAVHKTLHMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.0 bits (144), Expect = 4e-12
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 120 KGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDIL 177
               +  +   +  + + C  C + +     L  H++ H   R Y C++C K F R+D L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 178 IEHKKIHQGIR-FKCD 192
            +H+ IH   + FKC 
Sbjct: 62  RDHRYIHSKEKPFKCQ 77

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 66.7 bits (164), Expect = 3e-15
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y C +  C + +   GSLT H + H G + ++C +C + +    +LT H + H G + + 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 164 CNLCSKEFLRKDILIEHKKIHQG 186
           C++C ++F R D    H KIH  
Sbjct: 65  CDICGRKFARSDERKRHTKIHLR 87

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 67.5 bits (166), Expect = 1e-14
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           YKC  C K +  + +L  H++ H G + Y C  C K +    +L  H++ H G + YKC 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
            C K F R+D L  H++ H G
Sbjct: 138 ECGKSFSREDNLHTHQRTHTG 158

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           Y C  C K +     L  H++ H G + YKC  C K +  +  L  H++ H G + YKC 
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
            C K F R+D L  H++ H G
Sbjct: 166 ECGKSFSRRDALNVHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 66.3 bits (163), Expect = 4e-14
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           Y C  C K +     L EH++ H G + YKC  C K +  K  LT H++ H G + YKC 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
            C K F ++  L  H++ H G
Sbjct: 82  ECGKSFSQRANLRAHQRTHTG 102

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 58.6 bits (143), Expect = 3e-11
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 118 FHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKD 175
           F   S         G + Y C  C K +    +L +H++ H G + YKC  C K F  K 
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63

Query: 176 ILIEHKKIHQG 186
            L  H++ H G
Sbjct: 64  DLTRHQRTHTG 74

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 64.4 bits (158), Expect = 3e-14
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR---YK 163
             C++C K +     L  HK  H G + Y C +C   +  K  ++ H + H G     Y 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 164 CNLCSKEFLRKDILIEH-KKIHQG 186
           C  C K F R D L  H K++H G
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIRFK 190
             C++C K +    +L  HK  H G + Y C +C   F RKD +  H + H G   K
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.5 bits (158), Expect = 4e-14
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 108 YKCD--LCSKEYFHKGSLTEHKKRHQGIR-YKCDL--CSKEYFHKGYLTDHKKIHQGIR- 161
           + C    C+K YF    L  H ++H G + Y+CD   C + +     L  H++ H G++ 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           ++C  C ++F R D L  H + H G
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 63.7 bits (156), Expect = 9e-14
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YK 163
           Y+CD   C + +     L  H++RH G++ ++C  C +++    +L  H + H G + + 
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS 96

Query: 164 CNL--CSKEFLRKDILIEHKKIH 184
           C    C K+F R D L+ H  +H
Sbjct: 97  CRWPSCQKKFARSDELVRHHNMH 119

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 63.3 bits (155), Expect = 6e-14
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 103 HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDL--CSKEYFHKGYLTDHKKIHQ 158
                      C K Y     L  H + H G + Y CD   C  ++     LT H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 159 GIR-YKCNLCSKEFLRKDILIEHKKIH 184
           G R ++C  C + F R D L  H K H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 125 EHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNL--CSKEFLRKDILIEHK 181
           +    H         C K Y    +L  H + H G + Y C+   C  +F R D L  H 
Sbjct: 1   KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

Query: 182 KIHQGIR-FKCDL 193
           + H G R F+C  
Sbjct: 58  RKHTGHRPFQCQK 70

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 63.2 bits (155), Expect = 1e-13
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           Y C  C K + HK     H   H G+R Y C +C K++  K +L  H KIH GI+ Y+CN
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 166 LCSKEFLRKDILIEHKKIHQG 186
           +C+K F+ +D    H+ +   
Sbjct: 70  ICAKRFMWRDSF--HRHVTSC 88

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.4 bits (127), Expect = 1e-09
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
           Y C  C K + HK     H  +H G+R Y C +C K+F  K  L+ H KIH GI+ ++C+
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.4 bits (127), Expect = 2e-09
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
           Y C +C K++  K  L  H K H GI+ Y+C++C+K +  +     H+ +    + Y+  
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAA 95

Query: 166 LCSKEFLRKDIL 177
              +        
Sbjct: 96  KAEQNTTEASGP 107

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKK---IHQGIR-Y 162
            +C  C K++  K  L  H ++H G + ++C  C K YF K  L +H+    +++  + +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 163 KCNLCSKEFLRKDILIEHKKIHQG 186
            C++C + F R+  L  H   H G
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTG 91

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.4 bits (150), Expect = 8e-13
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKR---HQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-Y 162
           ++C  C K YF K +L EH+ R   ++  + + C +C + +  +  L  H   H G   Y
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95

Query: 163 KCNLCSKEFLRKDILIEHK-KIHQG 186
           KC+ CS++F++K  L  H  K+H G
Sbjct: 96  KCSSCSQQFMQKKDLQSHMIKLHSG 120

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 60.9 bits (149), Expect = 4e-13
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 122 SLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIE 179
               H       + YKCD C   + +KG L  HK +H G + Y+CN+C  +F R   L  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 180 HKKIHQG 186
           H +IH G
Sbjct: 64  HTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.9 bits (123), Expect = 2e-09
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
           YKCD C   + +KG+L  HK  H G + Y+C++C  ++     L  H +IH G
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.9 bits (149), Expect = 4e-13
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 119 HKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDI 176
             GS    + + +  R YKCD C K + H   L+ H++ H G + YKC+ C K F+++  
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 177 LIEHKKIHQG 186
           LI H ++H G
Sbjct: 62  LIGHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 103 HRGIR-YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
            R  R YKCD C K + H   L++H++ H G + YKCD C K +  + +L  H ++H G
Sbjct: 13  QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 146 HKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
             G     +   +  R YKC+ C K F     L +H++ H G + +KCD
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD 50

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 60.3 bits (147), Expect = 1e-12
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDL--CSKEYFHKGYLTDHKKIHQGIR- 161
           + CD   C+K Y     L  H + H G + YKC    C   +     LT H + H G + 
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQ 185
           ++C +C++ F R D L  H K HQ
Sbjct: 76  FQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 119 HKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNL--CSKEFLRKD 175
             G   E ++ H         C+K Y    +L  H + H G + YKC    C   F R D
Sbjct: 5   SSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD 61

Query: 176 ILIEHKKIHQGIR-FKCD 192
            L  H + H G + F+C 
Sbjct: 62  ELTRHYRKHTGAKPFQCG 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNL 166
           ++C +C + +     LT H + H G + + CD+C +++        H+ I   +    + 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 167 CSKEFLRKDILIEHK---KIHQG 186
             +   +   L       K   G
Sbjct: 64  VEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIRFKCD 192
           ++C +C + +    +LT H + H G + + C++C ++F R D    H+ I   +    D
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILED 62

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 107 RYKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCD--LCSKEYFHKGYLTDHKKIHQGIR 161
           RY C    C   Y     L  H  +H G + + C    C K +    +LT H   H G +
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71

Query: 162 -YKCN--LCSKEFLRKDILIEHKKIHQG 186
            + C+   C   F  K  + +H      
Sbjct: 72  NFTCDSDGCDLRFTTKANMKKHFNRFHN 99

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 11/96 (11%)

Query: 108 YKCD--LCSKEYFHKGSLTEHKKRHQGIR---YKCDL--CSKEYFHKGYLTDHKKIHQGI 160
           + CD   C   +  K ++ +H  R   I+   Y C    C K +     L  H+  H   
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 161 R-YKCN--LCSKEFLRKDILIEHKKIHQGIR-FKCD 192
             Y+C    C K F     L  H+K+H G    K D
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 168

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKC--DLCSKEYFHKGYLTDHKKIHQGIR- 161
           Y C    C K +     L  H+  H     Y+C  + C K +     L  H+K+H G   
Sbjct: 105 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 164

Query: 162 YKCNLCSKEFLRKDILIEHKK-IHQ 185
            K + CS       + ++H    HQ
Sbjct: 165 KKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 6/67 (8%)

Query: 126 HKKRHQG-IRYKCDL--CSKEYFHKGYLTDHKKIHQGIR-YKCN--LCSKEFLRKDILIE 179
            K       RY C    C   Y     L  H   H G + + C    C K F     L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 180 HKKIHQG 186
           H   H G
Sbjct: 63  HSLTHTG 69

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 121 GSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-----YKCNLCSKEFLRK 174
           GS     + H G + Y C  C K +  K  L  H K +         + C+ C K F R+
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 175 DILIEHKKIHQG 186
           + +  H     G
Sbjct: 61  NTMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 55.2 bits (134), Expect = 6e-11
 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 6/70 (8%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-----YKCDLCSKEYFHKGYLTDHKKIHQGIR- 161
           Y C  C K +  K  L  H KR+         + C  C K +  +  +  H     G   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 162 YKCNLCSKEF 171
            +        
Sbjct: 76  VEGENSGPSS 85

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 123 LTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEH 180
            +     H G + Y C  C K +     L  H+++H G + YKC  C K F +   LI H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 181 KKIHQG 186
           ++IH  
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
           Y C  C K +     L +H++ H G + YKC  C K +     L +H++IH  
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.8 bits (102), Expect = 2e-06
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 150 LTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
            +    IH G + Y C  C K F R  IL++H+++H G + +KC 
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL 46

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDL--CSKEYFHKGYLTDHKKIHQGIR-YK 163
           + C  C K +     L  H+  H G + ++C    C K +     L  H +IH G R Y 
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94

Query: 164 CNL--CSKEFLRKDILIEHKKIHQG 186
           C    C+K+F +   L  H   H  
Sbjct: 95  CPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIR-YKC 164
             C    C+K +    ++ +H   H    + C  C K +     L  H+ +H G + ++C
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 165 NL--CSKEFLRKDILIEHKKIHQGIR-FKC 191
               C K F     L  H +IH G R + C
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 121 GSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR---YKCNLCSKEFLRKDI 176
           GS     + H G + Y+C +C   +   G +  H           + C  C     RK  
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 177 LIEH-KKIHQG 186
           L  H +K H  
Sbjct: 61  LGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR---YKCDLCSKEYFHKGYLTDH-KKIHQG 159
           Y+C +C   +   G++  H  +        + C  C      K  L  H +K H  
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 4/49 (8%)

Query: 148 GYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR---FKCD 192
           G      + H G + Y+C +C   F +   +  H           F C 
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP 49

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 53.7 bits (130), Expect = 2e-10
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKI--HQGIR-YKCNLCSKEFLRKDILIEHKKIHQGI 187
           Y+C +CS+ Y H      H      + ++ Y C  C KEF RKD +  H KI   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 108 YKCDLCSKEYFHKGSLTEHK--KRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGI 160
           Y+C +CS+ Y H  +   H      + ++ Y C  C KE+  K  +T H KI   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 14/98 (14%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG----------IRYKCDLCSKEYFHKGYLTDHKKIH 157
                C + +     L  H                   +C    K +  K  L +H ++H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 158 QGIR-YKCNL--CSKEFLRKDILIEHKKIHQGIR-FKC 191
            G + + C    C K F R + L  HK+ H G + FKC
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 7/105 (6%)

Query: 95  VGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDL--CSKEYFHKGYLT 151
           VG   +  H     +C    K +  K  L  H + H G + + C    C K +     L 
Sbjct: 50  VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLK 109

Query: 152 DHKKIHQGIR-YKCNL--CSKEFLRKDILIEHKKIHQGIR-FKCD 192
            HK+ H G + +KC    C + F       +H  +H   +     
Sbjct: 110 IHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 14/92 (15%), Positives = 23/92 (25%), Gaps = 12/92 (13%)

Query: 113 CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG----------IR 161
                         K   +         C + +     L  H  +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQGIR-FKCD 192
            +C    K F  K  L+ H ++H G + F C 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCP 94

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.8 bits (127), Expect = 5e-10
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR----YKCNLCSKEFLRKDILIEHKKIH 184
            +C++C      K  L  H++ H        + C  C K F + D +  H+   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 7e-10
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR----YKCDLCSKEYFHKGYLTDHKKIH 157
            +C++C      K SL  H+++H        + C+ C K +     +  H+   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.5 bits (127), Expect = 5e-10
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
            KC  CS     K  L  H++IH   R +KCN CS +  +   L +H K   G
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
            KC  CS     K +L  H++ H   R +KC+ CS +      L+ H K   G
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCD--LCSKEYFHKGYLTDHKKIHQGIR- 161
           Y C    C K +     L  H+  H     Y+C    C K +     L  H+K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 162 YKCNLCSKEFLRKDILIEH-KKIH 184
            K + CS       + ++H  + H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 135 YKCDL--CSKEYFHKGYLTDHKKIHQGIR-YKCN--LCSKEFLRKDILIEHKKIHQGIR- 188
           Y C    C K +     L  H+  H     Y+C    C K F     L  H+K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 189 FKCD 192
            K D
Sbjct: 62  KKDD 65

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 13/98 (13%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKR---HQGIR-YKCDLC-----SKEYFHKGYLTDHKKIHQ 158
            + D CS+E+  +  L  H      H   + + C         + +  +  L  H + H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 159 GIR-YKCNL--CSKEFLRKDILIEHKKIHQGIR-FKCD 192
           G + +KC    C K + R + L  H + H G + + C+
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 9/88 (10%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKC--DLCSKEYFHKGYLTDHKK-IHQGIR 161
           +KC    C K Y    +L  H + H G + Y C  + CSK + +      H+   H   +
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127

Query: 162 -YKCNL--CSKEFLRKDILIEHKKIHQG 186
            Y C L  C+K +     L +H K   G
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 48.6 bits (117), Expect = 1e-08
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEH-KKIHQG 186
           + C++C++ +  + +L  H + H   + Y C LC++ F R+D+LI H +KIH G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDH-KKIHQG 159
           + C++C++ +  +  L  H + H   + Y C LC++ +  +  L  H +KIH G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKK-RHQGIR-YKCD--LCSKEYFHKGYLTDHKKIHQGIR 161
             CD   C + + ++  L  HKK +H   + + C    C K +  K +L +H K+H   R
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 162 -YKCNLCSKEF 171
            Y C       
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 135 YKCDL--CSKEYFHKGYLTDHKKI-HQGIR-YKCN--LCSKEFLRKDILIEHKKIHQGIR 188
             CD   C + + ++ YL  HKK  H   + + C    C K F  K  L EH K+H   R
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 189 -FKCD 192
            + C+
Sbjct: 68  DYICE 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 44.6 bits (106), Expect = 5e-07
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 135 YKCDL--CSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIH 184
           Y C +  C + +     LT H +IH G + ++C +C + F R D L  H + H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIH 157
           Y C +  C + +     LT H + H G + ++C +C + +    +LT H + H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 5e-07
 Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 8/92 (8%)

Query: 97  KLNKILHRG-IRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKK 155
           KL   +  G  +++C  CS  Y     LT H       R            +      + 
Sbjct: 8   KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRS 67

Query: 156 IHQGIR-------YKCNLCSKEFLRKDILIEH 180
           + +           KC  C   F     L  H
Sbjct: 68  LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 1/66 (1%)

Query: 122 SLTEHKKRHQG-IRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEH 180
           S   +     G  +++C  CS  Y     LT H       R   +       ++      
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 181 KKIHQG 186
           + + + 
Sbjct: 66  RSLLEM 71

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 107 RYKCDLCSKEYFHKGSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
           +Y C+ C         L +H + H  +R Y C  C+  +  KG LT H K    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 8e-06
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 134 RYKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
           +Y C+ C         L  H + H  +R Y C  C+  F  K  L +H K    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.7 bits (100), Expect = 3e-06
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 121 GSLTEHKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIE 179
           GS  + +K H G R  KC  C   +  +  L+  K         C  C K+  ++  L +
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNK 57

Query: 180 HKKIHQG 186
            +    G
Sbjct: 58  DEGNESG 64

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 5e-06
 Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 107 RYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNL 166
            Y+C LC+ +         H++  +     C  CS  +F      +H+   +  +  C  
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLE 74

Query: 167 CSKEFLRKDILIEHKK 182
           C + F     +  H+ 
Sbjct: 75  CMRTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 7e-05
 Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 1/69 (1%)

Query: 123 LTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKK 182
            +          Y+C LC+ +         H+++ +     C  CS  F   ++  EH+ 
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHES 63

Query: 183 IHQGIRFKC 191
             +  +  C
Sbjct: 64  KCEYKKLTC 72

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIR-FKC 191
                 G R Y CN C K F R   LIEH K H   +    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 120 KGSLTEHKKRHQGIR-YKCDL--CSKEYFHKGYLTDHKKIHQGIR-YKCNL--CSKEFLR 173
               +  +     IR + C    C K YF   +L  H + H G + + C+   C + F R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 174 KDILIEHKKIH 184
            D L  H++ H
Sbjct: 62  SDELSRHRRTH 72

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                    + Y CN C K F R   L  H+KIH  
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R Y+C+ C K F RK  LI H++IH G
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F R   L +H+KIH G
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC+ C K +     L+ H+KIH G +    +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R ++C+ C K FL+    I+H++IH G
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 6e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC+ C K F R   L EH++IH G
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC  C K +    +L +H++IH G R    +
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + +KC++C K F  +  L  H  +H  
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + +KCD+C K +  +  L  H  +H   +    +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 9e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L  H +IH G
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC+ C K +    +LT+H +IH G +    +
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y C  C K F R   L++H+++H G
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R +KCN C K F++   LI+H++IH G
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                   + YKC  C K + R+  L  H+++H G
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y CN C K F++K  L  H++IH G
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L+ H+ IH G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G++ Y CN C K F     L  H+ IH G
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G++ Y C+ C K +     LT H+ IH G +    +
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G   Y+C+ C K F RK  LI H++ H G
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + +KCN C K F +   L  H++IH G
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + +KC+ C K +     LT H++IH G +    +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G   Y+C  C K F RKD L+ H+K H G
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F     L  H+ IH G
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC+ C K +     LT H+ IH G +    +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y CN+C K F+    L +H ++H  
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + ++C  C K F RK  L  H+KIH G
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC  C K F       +H+++H G
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC  C K +      T H+++H G R    +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L  H+ IH G
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L  H++IH G
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L  H++IH G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+CN C K F+ K +LI H++ H G
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G   + C+ C K F  K  LI H+KIH G
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R Y+C  C K F  K  LI H++ H G
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C  C K F +K  L +H++IH G
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R Y+C+ C K F++K  L  H++IH+G
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+CN C K F  K  L+ H++ H G
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                  G + YKC  C K F+ +  L  H  +H G
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC+ C K +  +  L  H  +H G +    +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC+ C K F R   L  H+ IH G
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC++C K F     L  H++IH G
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKCD+C K + +   LT H++IH G +    +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L  H+ IH G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F +   L  H+++H G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC++C KEF +   L  H+++H G
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKCD+C KE+    +L  H+++H G +    +
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC+ C K F RK  L  H++ H G
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R +KCN C K F R+  L  H ++H  
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G R Y C +C K F  +  LI+H+KIH G
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y C+ C K F     L+ H++IH G
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC +C K F     L++H  +H G
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + + C  C K F     L +H++IH G
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C+ C K F +K  LI H ++H G
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 3/49 (6%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDH-KKIHQGIR-YKCNLCSKEF 171
                   + Y C  C K +    +L  H K++H   R +KC +     
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y CN C K F +K IL  H++ H G
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + +KC  C K + ++  L +H+++H G
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+CN C K F  +  L  H+ IH G
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + ++C  C K F  K  L+ H++IH G
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y C  C K F+    L EH++IH G
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + Y C+ C K + H   L +H++IH G +    +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 4/44 (9%)

Query: 153 HKKIHQGIR-YKCN--LCSKEFLRKDILIEHKKIHQGIR-FKCD 192
                 G + + C    C   F R D L  H++ H G++     
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G++ Y C+ C+K F  K  LI H++ H G
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C++C K F     L +H+++H G
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + Y+CD+C K + H   LT H+++H G +    +
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+CN C K F +   L  H+++H G
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC+ C K F  K  L  H+K H G
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC  C K +  K  L  H+K H G R    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y C  C K F  +  LI+H+KIH  
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKC  C K +  K  L  H+K+H G
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC+ C K Y  K  L  H+K+H G R    +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C  C K F +   LI+H+++H G
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C+ C K F++K  L  H++IH G
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y C+ C K F  K  LI H + H G
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F     L  H++IH G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + YKC+ C K + H  YL+ H++IH G +    +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                  G + +KC  C K F +   L  H+++H G
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                  G + Y+C  C K F  +  L  H+KIH G
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                   + ++C+ C + F  K  L +H++IH G
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                  G + +KC  C K F R+  L  H K+H G
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + ++C+ C K F  K  LI H++ H G
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + YKCN C K F  +  L  H+  H G
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + ++C  C K F     LI H++IH G
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                  G + ++C  C K F +   L  H+++H G
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G++ Y CN C K F  K  LI H + H G
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + +KC  C K F +   L  H +IH G
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                +G + Y+C+ C K F     L +H   H  
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 152 DHKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                  G + YKC  C K + R+  L  H+++H G
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C++C K F  +  L  H++IH G
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGIR-YKCN 165
                 G + Y+C +C K + H+  L+ H++IH G +    +
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C +CSK F +K  L +H+K H G
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + +KC  C K F        H++ H G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y C  C K F     L++H+++H G
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + Y+C++C K F +K  L  H++IH G
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 154 KKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                G   Y+C+ C K F RKD LI H++ H G
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAG 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + ++C  C K F     L  H++IH G
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.9 bits (81), Expect = 8e-04
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
                 G + + C+ C K F     L  H+++H G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	193
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.78
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.76
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.73
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.72
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.66
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.64
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.63
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.63
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.62
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.61
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.58
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.53
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.53
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.52
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.52
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.51
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.51
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.5
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.5
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.49
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.46
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.46
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.45
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.45
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.43
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.41
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.4
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.36
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.33
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.33
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.29
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.27
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.24
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.23
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.22
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.22
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.21
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.14
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.1
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.99
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.98
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.97
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.94
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.93
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.93
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.91
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.89
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.88
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.79
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.77
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.75
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.75
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.74
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.68
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.67
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.64
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.58
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.57
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.56
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.56
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.55
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.53
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.53
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.53
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.53
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.52
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.51
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.51
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.47
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.85
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.46
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.44
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.42
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.38
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.73
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.37
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.35
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.35
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.32
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.31
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.21
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.48
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.17
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.17
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.16
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.11
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.11
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.06
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.04
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.03
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.01
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.0
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.22
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.97
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.95
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.93
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.16
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.1
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.82
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.24
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	97.11
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.84
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.69
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.68
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.4
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.57
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.29
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.21
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.16
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.0
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	86.16
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.33
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	83.81
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.17
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.14
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	82.73

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=1e-29  Score=182.72  Aligned_cols=161  Identities=24%  Similarity=0.482  Sum_probs=121.1

Q ss_pred             CCCCceeEEEecccccCCCccc----cccCCCCcccchhHhhccCchhhcccccccccCCCCccCCCCccc-------ch
Q psy13164         29 PLDIPYEVTVKEESYEGDSINV----EENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKV-------GK   97 (193)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~-------~~   97 (193)
                      ..+.++.|..+...+.....+.    .......+.|..|++.|.+...|..|+..+.. ..+|.|+.|++.       ..
T Consensus        17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~   95 (190)
T 2i13_A           17 PGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG-EKPYKCPECGKSFSQRANLRA   95 (190)
T ss_dssp             --------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHH
T ss_pred             CCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC-CCCccCcccCCccCCHHHHHH
Confidence            3445678888888877655432    22344678899999999999999999988764 678999999874       56


Q ss_pred             hhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChH
Q psy13164         98 LNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKD  175 (193)
Q Consensus        98 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~  175 (193)
                      |+++|.+.++|.|..|++.|.+...|..|+++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|++.|....
T Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~  175 (190)
T 2i13_A           96 HQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD  175 (190)
T ss_dssp             HHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             HHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHH
Confidence            778888889999999999999999999999999887 899999999999999999999999987 999999999999999


Q ss_pred             HHHHHHHHcCCCCCC
Q psy13164        176 ILIEHKKIHQGIRFK  190 (193)
Q Consensus       176 ~L~~H~~~h~~~~~~  190 (193)
                      .|..|+++|+|++||
T Consensus       176 ~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          176 ALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHTTC------
T ss_pred             HHHHHHHhcCCCCCC
Confidence            999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=1.4e-28  Score=176.64  Aligned_cols=139  Identities=26%  Similarity=0.500  Sum_probs=115.7

Q ss_pred             CCCCcccchhHhhccCchhhcccccccccCCCCccCCCCccc-------chhhhhhcCCCceecccccccccChhHHHHH
Q psy13164         54 NGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKV-------GKLNKILHRGIRYKCDLCSKEYFHKGSLTEH  126 (193)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~-------~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h  126 (193)
                      ...++.|..|++.|.+...|..|+..+.. ..+|.|+.|++.       ..|+++|.+.++|.|..|++.|.....|..|
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   96 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTG-EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH   96 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCC-CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHH
Confidence            45678999999999999999999988764 778999999874       5678888999999999999999999999999


Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      ++.|.+. +|.|..|++.|.+...|..|+++|++. +|.|..|++.|.....|..|+++|+|++||.|.
T Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           97 QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             HHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             HHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            9999887 899999999999999999999999987 999999999999999999999999999999873

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=8.8e-25  Score=151.80  Aligned_cols=131  Identities=23%  Similarity=0.449  Sum_probs=116.0

Q ss_pred             CCcccchhHhhccCchhhcccccc--cccCCCCccCCC--C---cc-------cchhhhhhcCCCceeccc--ccccccC
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNESD--HERRSINYNCQQ--S---YK-------VGKLNKILHRGIRYKCDL--CSKEYFH  119 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~~~--~~~~~~~~~C~~--c---~~-------~~~~~~~~~~~~~~~C~~--C~~~f~~  119 (193)
                      ..+.|..|++.|.+...|..|+..  .+.+.++|.|+.  |   ++       +..|+++|.+.++|.|..  |++.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            357899999999999999999884  234577888874  3   23       457888899999999985  9999999


Q ss_pred             hhHHHHHHHhhCCc-ceeccc--cchhccChhHHHHHH-HHhCCc-cccccc--CcccccChHHHHHHHHHcCC
Q psy13164        120 KGSLTEHKKRHQGI-RYKCDL--CSKEYFHKGYLTDHK-KIHQGI-RYKCNL--CSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       120 ~~~l~~h~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~-~~h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ...|..|+++|.+. +|.|..  |++.|.+...|..|+ ++|++. +|.|..  |++.|.+.+.|..|+++|+|
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            99999999999987 899998  999999999999999 789987 999998  99999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.91  E-value=1.8e-24  Score=155.19  Aligned_cols=132  Identities=22%  Similarity=0.403  Sum_probs=107.7

Q ss_pred             CCCCccc--chhHhhccCchhhcccccccccCCCCccC--CCCccc-------chhhhhhcCCCceecc--cccccccCh
Q psy13164         54 NGNDAVT--RDCLEFFKSHDSTLKNESDHERRSINYNC--QQSYKV-------GKLNKILHRGIRYKCD--LCSKEYFHK  120 (193)
Q Consensus        54 ~~~~~~c--~~c~~~f~~~~~~~~h~~~~~~~~~~~~C--~~c~~~-------~~~~~~~~~~~~~~C~--~C~~~f~~~  120 (193)
                      ....|.|  ..|++.|.+...|..|++.|.. .++|.|  ..|++.       ..|+++|.+.++|.|.  .|++.|.+.
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTG-EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHC-CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCC-CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence            3456778  6899999888888888887764 677888  778763       4677778888888998  799999999


Q ss_pred             hHHHHHH-HhhC-Cc-ceec--cccchhccChhHHHHHHHHhCCc-cccccc--CcccccChHHHHHHHHHcCC
Q psy13164        121 GSLTEHK-KRHQ-GI-RYKC--DLCSKEYFHKGYLTDHKKIHQGI-RYKCNL--CSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       121 ~~l~~h~-~~h~-~~-~~~C--~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ..|..|+ ..|. +. +|.|  ..|++.|.+...|..|+++|++. ||.|+.  |+++|.+.+.|..|+++|+|
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            9999998 5563 33 7888  88999999999999998888886 899977  99999999999999988888

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=1.9e-24  Score=150.22  Aligned_cols=129  Identities=19%  Similarity=0.332  Sum_probs=111.1

Q ss_pred             ccCCCCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhC
Q psy13164         52 ENNGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQ  131 (193)
Q Consensus        52 ~~~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  131 (193)
                      ......+.|..|++.|.+...|..|+..++.+..+.....|             ..|.|..|++.|.....|..|+++|.
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-------------~~~~C~~C~~~f~~~~~l~~H~~~h~   86 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------YWEECPREGKSFKAKYKLVNHIRVHT   86 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-------------CBTTCTTSSCCCSSHHHHHHHTHHHH
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-------------cccCCCCcccccCCHHHHHHHHHhcC
Confidence            34556889999999999999999998875443332222111             23789999999999999999999999


Q ss_pred             Cc-ceeccc--cchhccChhHHHHHHHHhCCc-cccccc--CcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        132 GI-RYKCDL--CSKEYFHKGYLTDHKKIHQGI-RYKCNL--CSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       132 ~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +. +|.|..  |++.|.....|..|+++|++. +|.|..  |++.|.....|..|+++|+|++||.|.
T Consensus        87 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           87 GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            87 899998  999999999999999999997 999997  999999999999999999999999884

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=2.1e-24  Score=146.19  Aligned_cols=92  Identities=28%  Similarity=0.525  Sum_probs=75.8

Q ss_pred             hhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHH
Q psy13164         99 NKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDI  176 (193)
Q Consensus        99 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~  176 (193)
                      ..++.|+++|.|.+|++.|.....|..|+++|.+. ||.|..|++.|.....|..|+++|+|+ ||.|.+|++.|...+.
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHH
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHH
Confidence            45566777888888888888888888888888876 788888888888888888888888876 8888888888888888


Q ss_pred             HHHHHHHcCCCCCC
Q psy13164        177 LIEHKKIHQGIRFK  190 (193)
Q Consensus       177 L~~H~~~h~~~~~~  190 (193)
                      |..|+++|++++|+
T Consensus        94 L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           94 MSSHIKSVHSQDPS  107 (133)
T ss_dssp             HHHHHHHHTCCCTT
T ss_pred             HHHHhHHhcCCCCC
Confidence            88888888776653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=1.6e-23  Score=150.23  Aligned_cols=152  Identities=20%  Similarity=0.315  Sum_probs=125.3

Q ss_pred             ceeE--EEecccccCCCcc----ccccCCCCccc--chhHhhccCchhhcccccccccCCCCccCC--CCccc-------
Q psy13164         33 PYEV--TVKEESYEGDSIN----VEENNGNDAVT--RDCLEFFKSHDSTLKNESDHERRSINYNCQ--QSYKV-------   95 (193)
Q Consensus        33 ~~~~--~~~~~~~~~~~~~----~~~~~~~~~~c--~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~--~c~~~-------   95 (193)
                      ++.|  ..+...+.....+    .......++.|  ..|++.|.+...|..|++.|.. .++|.|+  .|++.       
T Consensus        12 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG-EKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT-CCCEECCSSSCCCEESCHHHH
T ss_pred             ceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC-CCceeCCCCCCCCccCCHHHH
Confidence            3444  3566666544332    22335668999  8999999999999999988764 7789999  89874       


Q ss_pred             chhh-hhh-cCCCceec--ccccccccChhHHHHHHHhhCCc-ceeccc--cchhccChhHHHHHHHHhCCccccccc--
Q psy13164         96 GKLN-KIL-HRGIRYKC--DLCSKEYFHKGSLTEHKKRHQGI-RYKCDL--CSKEYFHKGYLTDHKKIHQGIRYKCNL--  166 (193)
Q Consensus        96 ~~~~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~--  166 (193)
                      ..|+ +.| .+..+|.|  ..|++.|.+...|..|+++|.+. ||.|+.  |++.|.....|..|+++|+|  |.|..  
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~  168 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDD  168 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTT
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCC
Confidence            4565 444 34678999  89999999999999999999987 899988  99999999999999999998  99999  


Q ss_pred             -CcccccChHHHHHHHHHcCCC
Q psy13164        167 -CSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       167 -C~~~F~~~~~L~~H~~~h~~~  187 (193)
                       |++.|.+...|..|+++|+|+
T Consensus       169 ~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          169 SCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             TCCCCCSCHHHHHHHHTTCC--
T ss_pred             cCCCccccHHHHHHHHHhhcCC
Confidence             999999999999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=5e-22  Score=132.68  Aligned_cols=111  Identities=27%  Similarity=0.507  Sum_probs=91.4

Q ss_pred             CCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhh---CC
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRH---QG  132 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h---~~  132 (193)
                      ..+.|..|++.|.+...|..|+                      ++|.+.++|.|..|++.|.....|..|+..|   .+
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~----------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   63 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHN----------------------RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS   63 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHH----------------------HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC
T ss_pred             CCCCCCCCCCcCCCHHHHHHHH----------------------HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC
Confidence            3455666666665555555554                      4445556799999999999999999999864   44


Q ss_pred             c-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHH-HcCCCC
Q psy13164        133 I-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKK-IHQGIR  188 (193)
Q Consensus       133 ~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~-~h~~~~  188 (193)
                      . +|.|..|++.|.....|..|+++|++. ||.|..|++.|.....|..|++ .|.|++
T Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           64 EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            4 899999999999999999999999987 9999999999999999999997 577764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=2.3e-22  Score=134.50  Aligned_cols=112  Identities=24%  Similarity=0.473  Sum_probs=91.8

Q ss_pred             CCcccc--hhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc
Q psy13164         56 NDAVTR--DCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI  133 (193)
Q Consensus        56 ~~~~c~--~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~  133 (193)
                      ..+.|.  .|++.|.+...|..|+..|                       +.++|.|..|++.|.....|..|++.|.+.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   60 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-----------------------GPRVHVCAECGKAFVESSKLKRHQLVHTGE   60 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-----------------------SCCCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-----------------------CCCCeECCCCCchhCCHHHHHHHHHHcCCC
Confidence            345666  6777776666666665544                       345699999999999999999999999987


Q ss_pred             -ceeccc--cchhccChhHHHHHHHHhCCc-ccccc--cCcccccChHHHHHHHHHcCCCCCC
Q psy13164        134 -RYKCDL--CSKEYFHKGYLTDHKKIHQGI-RYKCN--LCSKEFLRKDILIEHKKIHQGIRFK  190 (193)
Q Consensus       134 -~~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~--~C~~~F~~~~~L~~H~~~h~~~~~~  190 (193)
                       +|.|..  |++.|.....|..|+++|++. +|.|+  .|++.|.+.+.|..|+++|++++++
T Consensus        61 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence             899986  999999999999999999987 99996  5999999999999999999999875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=6.9e-22  Score=131.16  Aligned_cols=87  Identities=28%  Similarity=0.718  Sum_probs=79.3

Q ss_pred             hhhhhcCCCceecc--cccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc--ccCcccc
Q psy13164         98 LNKILHRGIRYKCD--LCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC--NLCSKEF  171 (193)
Q Consensus        98 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C--~~C~~~F  171 (193)
                      |+++|.+.++|.|.  .|++.|.+...|..|++.|.+. +|.|..|++.|.....|..|+++|++. +|.|  +.|++.|
T Consensus        27 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  106 (119)
T 2jp9_A           27 HSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF  106 (119)
T ss_dssp             HHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEE
T ss_pred             HHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCcccc
Confidence            44445556679999  7999999999999999999887 899999999999999999999999987 9999  8999999


Q ss_pred             cChHHHHHHHHHc
Q psy13164        172 LRKDILIEHKKIH  184 (193)
Q Consensus       172 ~~~~~L~~H~~~h  184 (193)
                      .+...|..|+++|
T Consensus       107 ~~~~~L~~H~~~H  119 (119)
T 2jp9_A          107 ARSDELVRHHNMH  119 (119)
T ss_dssp             SSHHHHHHHHHTC
T ss_pred             CCHHHHHHHHhcC
Confidence            9999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=1.8e-22  Score=136.71  Aligned_cols=100  Identities=21%  Similarity=0.401  Sum_probs=85.8

Q ss_pred             ccccccccCCCCccCCCCccc-------chhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccC
Q psy13164         75 KNESDHERRSINYNCQQSYKV-------GKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFH  146 (193)
Q Consensus        75 ~h~~~~~~~~~~~~C~~c~~~-------~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~  146 (193)
                      .|....+.|+++|.|++|++.       ..|+++|.+.++|.|..|++.|.....|..|+++|.++ ||.|..|++.|..
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            344444456788888888873       56778888889999999999999999999999999987 8999999999999


Q ss_pred             hhHHHHHHHHhCCc-------ccccccCcccccCh
Q psy13164        147 KGYLTDHKKIHQGI-------RYKCNLCSKEFLRK  174 (193)
Q Consensus       147 ~~~l~~H~~~h~~~-------~~~C~~C~~~F~~~  174 (193)
                      ...|..|+++|+++       +|.|..|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999998753       58999999988653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=3e-21  Score=125.60  Aligned_cols=89  Identities=27%  Similarity=0.585  Sum_probs=84.1

Q ss_pred             CCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHH
Q psy13164        104 RGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHK  181 (193)
Q Consensus       104 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~  181 (193)
                      ..++|.|..|++.|.....|..|++.|.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|.....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            456799999999999999999999999987 899999999999999999999999987 999999999999999999999


Q ss_pred             HHcCCCCCCCC
Q psy13164        182 KIHQGIRFKCD  192 (193)
Q Consensus       182 ~~h~~~~~~~c  192 (193)
                      ++|++++||..
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            99999998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=6.3e-21  Score=121.82  Aligned_cols=87  Identities=28%  Similarity=0.514  Sum_probs=82.3

Q ss_pred             cCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHH
Q psy13164        103 HRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEH  180 (193)
Q Consensus       103 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H  180 (193)
                      .+.++|.|..|++.|.....|..|++.|.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            4567899999999999999999999999987 899999999999999999999999987 99999999999999999999


Q ss_pred             HHHcCCCCC
Q psy13164        181 KKIHQGIRF  189 (193)
Q Consensus       181 ~~~h~~~~~  189 (193)
                      +++|+|+++
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            999999884

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.6e-21  Score=125.02  Aligned_cols=93  Identities=16%  Similarity=0.307  Sum_probs=85.6

Q ss_pred             hhhhhcCCCceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHH
Q psy13164         98 LNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDI  176 (193)
Q Consensus        98 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~  176 (193)
                      ++++|.+.++|.|..|++.|.....|..|+++|. .+|.|..|++.|.....|..|++ |++. +|.|..|++.|.....
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            4556777889999999999999999999999994 49999999999999999999996 9887 9999999999999999


Q ss_pred             HHHHHH-HcCCCCCCCC
Q psy13164        177 LIEHKK-IHQGIRFKCD  192 (193)
Q Consensus       177 L~~H~~-~h~~~~~~~c  192 (193)
                      |..|++ +|+++++|.+
T Consensus        85 L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCC
Confidence            999997 8999999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.83  E-value=5.6e-21  Score=120.58  Aligned_cols=84  Identities=31%  Similarity=0.716  Sum_probs=77.8

Q ss_pred             CCceecc--cccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHH
Q psy13164        105 GIRYKCD--LCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEH  180 (193)
Q Consensus       105 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H  180 (193)
                      .++|.|.  .|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|...+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4679998  6999999999999999999887 899999999999999999999999987 99999999999999999999


Q ss_pred             HHHcCCCC
Q psy13164        181 KKIHQGIR  188 (193)
Q Consensus       181 ~~~h~~~~  188 (193)
                      +++|+|++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            99999986

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=1e-20  Score=117.26  Aligned_cols=80  Identities=31%  Similarity=0.718  Sum_probs=76.1

Q ss_pred             ceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHc
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      ||.|..|++.|.....|..|++.|.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|...+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            589999999999999999999999877 899999999999999999999999987 999999999999999999999999


Q ss_pred             CC
Q psy13164        185 QG  186 (193)
Q Consensus       185 ~~  186 (193)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            86

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.6e-20  Score=130.14  Aligned_cols=108  Identities=22%  Similarity=0.343  Sum_probs=94.9

Q ss_pred             CCccCCCCccc-------chhhh---hhcCCCceeccc-----ccccccChhHHHHHHHhhCCc-ceeccc--cchhccC
Q psy13164         85 INYNCQQSYKV-------GKLNK---ILHRGIRYKCDL-----CSKEYFHKGSLTEHKKRHQGI-RYKCDL--CSKEYFH  146 (193)
Q Consensus        85 ~~~~C~~c~~~-------~~~~~---~~~~~~~~~C~~-----C~~~f~~~~~l~~h~~~h~~~-~~~C~~--C~~~f~~  146 (193)
                      .+|.|+.|++.       ..|++   ++.+.++|.|..     |++.|.....|..|++.|.+. +|.|..  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            46889999874       45665   456677888874     349999999999999999987 899985  9999999


Q ss_pred             hhHHHHHHHHhCCc-cccccc--CcccccChHHHHHHH-HHcCCCCCCCC
Q psy13164        147 KGYLTDHKKIHQGI-RYKCNL--CSKEFLRKDILIEHK-KIHQGIRFKCD  192 (193)
Q Consensus       147 ~~~l~~H~~~h~~~-~~~C~~--C~~~F~~~~~L~~H~-~~h~~~~~~~c  192 (193)
                      ...|..|+++|++. +|.|..  |++.|.+.+.|..|+ ++|+++++|.|
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  131 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC  131 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC
Confidence            99999999999987 999998  999999999999998 89999999877

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=2.3e-20  Score=123.70  Aligned_cols=89  Identities=29%  Similarity=0.692  Sum_probs=84.0

Q ss_pred             CCCceeccc--ccccccChhHHHHHHHhhCCc-ceecc--ccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHH
Q psy13164        104 RGIRYKCDL--CSKEYFHKGSLTEHKKRHQGI-RYKCD--LCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDIL  177 (193)
Q Consensus       104 ~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L  177 (193)
                      +.++|.|..  |++.|.....|..|++.|.+. +|.|.  .|++.|.+...|..|+++|++. +|.|..|++.|.....|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            457899987  999999999999999999887 89999  7999999999999999999987 99999999999999999


Q ss_pred             HHHHHHcCCCCCCCC
Q psy13164        178 IEHKKIHQGIRFKCD  192 (193)
Q Consensus       178 ~~H~~~h~~~~~~~c  192 (193)
                      ..|+++|+++++|.|
T Consensus        83 ~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHTCCCEEC
T ss_pred             HHHHHHhcCCCCeeC
Confidence            999999999998877

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=5.2e-20  Score=122.81  Aligned_cols=90  Identities=27%  Similarity=0.497  Sum_probs=83.3

Q ss_pred             CCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHh---CCc-ccccccCcccccChHHHH
Q psy13164        104 RGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIH---QGI-RYKCNLCSKEFLRKDILI  178 (193)
Q Consensus       104 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h---~~~-~~~C~~C~~~F~~~~~L~  178 (193)
                      +.++|.|..|++.|.....|..|++.|.+. +|.|..|++.|.....|..|++.|   .+. +|.|..|++.|.....|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            456799999999999999999999999987 899999999999999999999964   454 899999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q psy13164        179 EHKKIHQGIRFKCDL  193 (193)
Q Consensus       179 ~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++++||.|.
T Consensus        84 ~H~~~h~~~~~~~C~   98 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCS   98 (124)
T ss_dssp             HHHHHHSSSCSEECS
T ss_pred             HHHHHcCCCCCccCC
Confidence            999999999998873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.9e-19  Score=114.61  Aligned_cols=86  Identities=31%  Similarity=0.604  Sum_probs=79.4

Q ss_pred             cCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCC---cccccccCcccccChHHHH
Q psy13164        103 HRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG---IRYKCNLCSKEFLRKDILI  178 (193)
Q Consensus       103 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~C~~C~~~F~~~~~L~  178 (193)
                      .+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|++   .+|.|..|++.|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            3567899999999999999999999999887 89999999999999999999999987   4899999999999999999


Q ss_pred             HHHH-HcCCCC
Q psy13164        179 EHKK-IHQGIR  188 (193)
Q Consensus       179 ~H~~-~h~~~~  188 (193)
                      .|++ +|+++.
T Consensus        83 ~H~~~~H~~~~   93 (95)
T 2yt9_A           83 GHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHTSCCCS
T ss_pred             HHHHHhcCCCC
Confidence            9986 788754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=1.7e-19  Score=120.46  Aligned_cols=88  Identities=25%  Similarity=0.458  Sum_probs=81.2

Q ss_pred             CCceecc--cccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCc-cccccc--CcccccChHHHHH
Q psy13164        105 GIRYKCD--LCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNL--CSKEFLRKDILIE  179 (193)
Q Consensus       105 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~F~~~~~L~~  179 (193)
                      .++|.|+  .|++.|.+...|..|+++|...+|.|..|++.|.....|..|+++|++. +|.|..  |++.|.....|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            4569999  8999999999999999999444899999999999999999999999987 999986  9999999999999


Q ss_pred             HHHHcCCCCCCCC
Q psy13164        180 HKKIHQGIRFKCD  192 (193)
Q Consensus       180 H~~~h~~~~~~~c  192 (193)
                      |+++|+++++|.|
T Consensus        83 H~~~h~~~~~~~C   95 (124)
T 1ubd_C           83 HVRIHTGDRPYVC   95 (124)
T ss_dssp             HHHHHHCCCCCCC
T ss_pred             HHHHhCCCCceEC
Confidence            9999999998887

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=2e-19  Score=117.75  Aligned_cols=85  Identities=34%  Similarity=0.678  Sum_probs=79.8

Q ss_pred             hhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHH
Q psy13164        101 ILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILI  178 (193)
Q Consensus       101 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~  178 (193)
                      +|.+.++|.| .|++.|.....|..|++.|.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4567788999 9999999999999999999987 899999999999999999999999987 999999999999999999


Q ss_pred             HHHHHcCC
Q psy13164        179 EHKKIHQG  186 (193)
Q Consensus       179 ~H~~~h~~  186 (193)
                      .|+++|++
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99998764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.78  E-value=1.6e-19  Score=104.98  Aligned_cols=56  Identities=29%  Similarity=0.555  Sum_probs=47.4

Q ss_pred             cceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        133 IRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      +||.|.+||+.|...+.|..|+++|+|+ ||.|.+|+++|...+.|..|+++|+|++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4788888888888888888888888887 8888888888888888888888888874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=6.5e-20  Score=120.98  Aligned_cols=94  Identities=19%  Similarity=0.213  Sum_probs=84.3

Q ss_pred             cchhhhhhcCCCceecccccccccChhHHHHHHHh--hCCc-c-eeccccchhc--cChhHHHHHHHHhCCc-ccccccC
Q psy13164         95 VGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKR--HQGI-R-YKCDLCSKEY--FHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus        95 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~--h~~~-~-~~C~~C~~~f--~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +..|+++|.+.++|.|..|++.|.....|..|++.  |.+. + +.|..|++.|  .....|..|+++|++. ||.|.+|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            46677788888999999999999999999999998  6554 4 5699999999  8999999999999987 9999999


Q ss_pred             cccccChHHHHHHHHHcCCCC
Q psy13164        168 SKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       168 ~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ++.|.....|..|+++|+...
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999987644

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.76  E-value=3e-18  Score=110.01  Aligned_cols=82  Identities=34%  Similarity=0.645  Sum_probs=76.8

Q ss_pred             CCceeccc--ccccccChhHHHHHHHhhCCc-ceecc--ccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHH
Q psy13164        105 GIRYKCDL--CSKEYFHKGSLTEHKKRHQGI-RYKCD--LCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILI  178 (193)
Q Consensus       105 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~  178 (193)
                      .++|.|..  |++.|.....|..|++.|.+. +|.|.  .|++.|.....|..|+++|++. +|.|..|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            45699996  999999999999999999987 89996  6999999999999999999987 999999999999999999


Q ss_pred             HHHHHcCC
Q psy13164        179 EHKKIHQG  186 (193)
Q Consensus       179 ~H~~~h~~  186 (193)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.75  E-value=2.6e-18  Score=107.95  Aligned_cols=81  Identities=33%  Similarity=0.645  Sum_probs=75.9

Q ss_pred             CCceeccc--ccccccChhHHHHHHHhhCCc-ceecc--ccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHH
Q psy13164        105 GIRYKCDL--CSKEYFHKGSLTEHKKRHQGI-RYKCD--LCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILI  178 (193)
Q Consensus       105 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~  178 (193)
                      ..+|.|..  |++.|.....|..|++.|.+. +|.|.  .|++.|.....|..|+++|++. +|.|..|++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            34699999  999999999999999999987 89997  5999999999999999999987 999999999999999999


Q ss_pred             HHHHHcC
Q psy13164        179 EHKKIHQ  185 (193)
Q Consensus       179 ~H~~~h~  185 (193)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999984

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.74  E-value=2.4e-18  Score=119.26  Aligned_cols=89  Identities=25%  Similarity=0.378  Sum_probs=82.1

Q ss_pred             CCceecccccccccChhHHHHHHHh-hCCc-c--------eeccccchhccChhHHHHHHHHhCCc-cccccc--Ccccc
Q psy13164        105 GIRYKCDLCSKEYFHKGSLTEHKKR-HQGI-R--------YKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNL--CSKEF  171 (193)
Q Consensus       105 ~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~-~--------~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~F  171 (193)
                      ..+|.|..|++.|.+...|..|++. |.+. +        |.|..|++.|.....|..|+++|++. +|.|..  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            4569999999999999999999998 7665 3        78999999999999999999999987 999998  99999


Q ss_pred             cChHHHHHHHHHcCCCCCCCCC
Q psy13164        172 LRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       172 ~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .....|..|+++|++++||.|.
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~  124 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCE  124 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCS
T ss_pred             CCHHHHHHHHHhhCCCCCccCC
Confidence            9999999999999999998873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.74  E-value=3.2e-19  Score=112.15  Aligned_cols=80  Identities=16%  Similarity=0.401  Sum_probs=76.0

Q ss_pred             CceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHHHHHHHHc
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      ++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|++.+|.|..|++.|.....|..|++.+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHH
Confidence            6799999999999999999999999987 899999999999999999999999988999999999999999999999875


Q ss_pred             C
Q psy13164        185 Q  185 (193)
Q Consensus       185 ~  185 (193)
                      +
T Consensus        82 h   82 (88)
T 1llm_C           82 K   82 (88)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.73  E-value=2.4e-18  Score=99.89  Aligned_cols=57  Identities=26%  Similarity=0.574  Sum_probs=54.3

Q ss_pred             CCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCcc
Q psy13164        105 GIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGIR  161 (193)
Q Consensus       105 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~  161 (193)
                      ++||.|.+|++.|.....|..|+++|+++ ||.|.+||+.|...+.|..|+++|+|+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            68999999999999999999999999988 9999999999999999999999999975

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.72  E-value=1.1e-17  Score=104.03  Aligned_cols=77  Identities=27%  Similarity=0.551  Sum_probs=73.4

Q ss_pred             ceec--ccccccccChhHHHHHHHhhCCc-ceeccc--cchhccChhHHHHHHHHhCCccccccc---CcccccChHHHH
Q psy13164        107 RYKC--DLCSKEYFHKGSLTEHKKRHQGI-RYKCDL--CSKEYFHKGYLTDHKKIHQGIRYKCNL---CSKEFLRKDILI  178 (193)
Q Consensus       107 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~F~~~~~L~  178 (193)
                      ||.|  ..|++.|.....|..|+++|.+. +|.|..  |++.|.....|..|+++|++  |.|..   |++.|...+.|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHH
Confidence            5899  99999999999999999999987 899998  99999999999999999998  99999   999999999999


Q ss_pred             HHHHHcC
Q psy13164        179 EHKKIHQ  185 (193)
Q Consensus       179 ~H~~~h~  185 (193)
                      .|+++|+
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            9999885

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.9e-17  Score=106.16  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=65.1

Q ss_pred             cccChhHHHHHHHhhCCc-ceeccccchhcc-ChhHHHHHHHHhCC-c-ccccccCcccccChHHHHHHHHHcCCCCCC
Q psy13164        116 EYFHKGSLTEHKKRHQGI-RYKCDLCSKEYF-HKGYLTDHKKIHQG-I-RYKCNLCSKEFLRKDILIEHKKIHQGIRFK  190 (193)
Q Consensus       116 ~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~-~~~~l~~H~~~h~~-~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~  190 (193)
                      .+.....+..|+++|.+. +|.|..|++.|. ....|..|+++|++ . +|.|.+|++.|.....|..|+++|++++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            345556677889999887 899999999999 99999999999887 5 899999999999999999999999998875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=6.4e-17  Score=98.97  Aligned_cols=59  Identities=39%  Similarity=0.855  Sum_probs=54.5

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|.|..|++.|.....|..|+++|++. +|.|..|++.|.....|..|+++|+|++||.|
T Consensus        18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            799999999999999999999999887 89999999999999999999999999999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.1e-16  Score=100.83  Aligned_cols=77  Identities=13%  Similarity=0.089  Sum_probs=67.8

Q ss_pred             cccccChhHHHHHHHhhCCc-ceeccccchhc-cChhHHHHHHHHhCCc-ccccccCcccccChHHHHHH-HHHcCCCCC
Q psy13164        114 SKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEY-FHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEH-KKIHQGIRF  189 (193)
Q Consensus       114 ~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f-~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H-~~~h~~~~~  189 (193)
                      ..+|.....|..|++.|.+. +|.|..|++.| .....|..|+++| ++ +|.|.+|++.|...+.|..| +++|+++.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            34567788888999888876 89999999999 9999999999999 76 99999999999999999999 899998766


Q ss_pred             CC
Q psy13164        190 KC  191 (193)
Q Consensus       190 ~~  191 (193)
                      +-
T Consensus        92 ~~   93 (96)
T 2ctd_A           92 GP   93 (96)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=1.8e-16  Score=96.14  Aligned_cols=61  Identities=38%  Similarity=0.743  Sum_probs=55.0

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCC
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFK  190 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~  190 (193)
                      +.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|.....|..|+++|+|++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4444 799999999999999999999999987 899999999999999999999999999987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.64  E-value=4.2e-16  Score=101.01  Aligned_cols=89  Identities=22%  Similarity=0.446  Sum_probs=72.2

Q ss_pred             CCCCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc
Q psy13164         54 NGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI  133 (193)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~  133 (193)
                      ....+.|..|++.|.....|..|++                      +|.+.++|.|..|++.|.....|..|+++|.+.
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~----------------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   71 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHER----------------------THTDERPYTCDICHKAFRRQDHLRDHRYIHSKE   71 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHH----------------------HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHH----------------------HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCC
Confidence            3445666666666666666655544                      444556799999999999999999999999987


Q ss_pred             -ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        134 -RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       134 -~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                       +|.|..|++.|.....|..|+++|++. +|.+
T Consensus        72 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           72 KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence             899999999999999999999999987 6653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=3.4e-16  Score=96.61  Aligned_cols=80  Identities=25%  Similarity=0.481  Sum_probs=65.3

Q ss_pred             cccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-cee
Q psy13164         58 AVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYK  136 (193)
Q Consensus        58 ~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~  136 (193)
                      +.|..|++.|.+...|..|+                      ++|.+.++|.|..|++.|.....|..|++.|.+. +|.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~----------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   59 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHL----------------------LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK   59 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHH----------------------HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             ccCCCCcccccCchhHHHHH----------------------HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCc
Confidence            45666666665555555554                      4444566799999999999999999999999887 899


Q ss_pred             ccccchhccChhHHHHHHHHhCC
Q psy13164        137 CDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       137 C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      |..|++.|.+...|..|+++|+|
T Consensus        60 C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           60 CQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhhCChHHHHHHHHhhCC
Confidence            99999999999999999999975

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.3e-16  Score=95.56  Aligned_cols=69  Identities=26%  Similarity=0.555  Sum_probs=62.5

Q ss_pred             CCCceeccc--ccccccChhHHHHHHH-hhCCc-ceeccc--cchhccChhHHHHHHHHhCCc-ccccccCccccc
Q psy13164        104 RGIRYKCDL--CSKEYFHKGSLTEHKK-RHQGI-RYKCDL--CSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFL  172 (193)
Q Consensus       104 ~~~~~~C~~--C~~~f~~~~~l~~h~~-~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~  172 (193)
                      +.++|.|..  |++.|.+...|..|++ .|.+. +|.|..  |++.|.....|..|+++|++. ||.|..|+++|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            456788886  9999999999999999 68876 899998  999999999999999999987 999999999984

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=5.5e-16  Score=96.57  Aligned_cols=77  Identities=19%  Similarity=0.345  Sum_probs=63.4

Q ss_pred             cchhhhhhcCCCceecccccccccChhHHHHHHHhhCC-----cceeccccchhccChhHHHHHHHHhCCc-ccccccCc
Q psy13164         95 VGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG-----IRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCS  168 (193)
Q Consensus        95 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~  168 (193)
                      +..|+++|.+.++|.|..|++.|.....|..|++.|..     .+|.|..|++.|.....|..|+++|++. ++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            45677788888888899999989888888888877554     3688888888888888888888888886 88888888


Q ss_pred             ccc
Q psy13164        169 KEF  171 (193)
Q Consensus       169 ~~F  171 (193)
                      .+|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=8.2e-16  Score=97.80  Aligned_cols=85  Identities=24%  Similarity=0.371  Sum_probs=71.1

Q ss_pred             CCCCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc
Q psy13164         54 NGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI  133 (193)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~  133 (193)
                      ...++.|..|++.|.+...|..|++.+                      .+.++|.|..|++.|.....|..|++.|.+.
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h----------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   62 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCH----------------------TGVKPYKCKTCDYAAADSSSLNKHLRIHSDE   62 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGC----------------------CCCCSEECSSSCCEESSHHHHHHHHHHSCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhc----------------------CCCCCEeCCCCCCccCCHHHHHHHHHHhCCC
Confidence            344567777777777766666665544                      3456799999999999999999999999987


Q ss_pred             -ceeccccchhccChhHHHHHHHHhCCc
Q psy13164        134 -RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 -~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                       +|.|..|++.|.....|..|+++|++.
T Consensus        63 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           63 RPFKCQICPYASRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence             899999999999999999999999986

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.61  E-value=7.4e-16  Score=96.80  Aligned_cols=64  Identities=23%  Similarity=0.570  Sum_probs=56.9

Q ss_pred             hhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc
Q psy13164         97 KLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus        97 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      .|+++|.+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|+++
T Consensus        24 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           24 RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             HHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhccc
Confidence            4445555667899999999999999999999999887 899999999999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.6e-16  Score=100.52  Aligned_cols=65  Identities=23%  Similarity=0.326  Sum_probs=45.0

Q ss_pred             cCCCceecccccccccChhHHHHHHH-hh---CCc-ceeccccchhccChhHHHHH-HHHhCCc-ccccccC
Q psy13164        103 HRGIRYKCDLCSKEYFHKGSLTEHKK-RH---QGI-RYKCDLCSKEYFHKGYLTDH-KKIHQGI-RYKCNLC  167 (193)
Q Consensus       103 ~~~~~~~C~~C~~~f~~~~~l~~h~~-~h---~~~-~~~C~~C~~~f~~~~~l~~H-~~~h~~~-~~~C~~C  167 (193)
                      .++++|.|..|++.|.....|..|++ .|   .+. ||.|..||+.|...+.|..| +++|+|+ ||.|.++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            45566777777777777777777776 36   333 67777777777777777777 6677775 7777653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.61  E-value=1.6e-16  Score=106.77  Aligned_cols=80  Identities=20%  Similarity=0.323  Sum_probs=68.4

Q ss_pred             Cceeccccccccc------ChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHHH
Q psy13164        106 IRYKCDLCSKEYF------HKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILI  178 (193)
Q Consensus       106 ~~~~C~~C~~~f~------~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~  178 (193)
                      +.+.|..|...|.      ....|..|+ .|++. ||.|..|++.|.....|..|+++| ..||.|..|++.|...+.|.
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHH
Confidence            3466777776665      556677777 46655 999999999999999999999999 66999999999999999999


Q ss_pred             HHHHHcCCC
Q psy13164        179 EHKKIHQGI  187 (193)
Q Consensus       179 ~H~~~h~~~  187 (193)
                      .|+++|+|.
T Consensus       118 ~H~~~h~~~  126 (129)
T 2wbt_A          118 DHVCKKHNI  126 (129)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHCCc
Confidence            999999986

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=4.2e-16  Score=97.13  Aligned_cols=70  Identities=24%  Similarity=0.424  Sum_probs=63.9

Q ss_pred             HHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCC-----cccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        123 LTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG-----IRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       123 l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~-----~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +.+|+++|.+. +|.|..|++.|.....|..|++.|++     .+|.|..|++.|.....|..|+++|++++++.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCccc
Confidence            56688899987 89999999999999999999987665     379999999999999999999999999998876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.2e-15  Score=91.52  Aligned_cols=61  Identities=30%  Similarity=0.348  Sum_probs=49.8

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCC
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFK  190 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~  190 (193)
                      |.+. +|.|..|++.|.....|..|+++|++. +|.|..|++.|.....|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3444 788888888888888888888888876 888888888888888888888888887764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.8e-15  Score=98.31  Aligned_cols=87  Identities=17%  Similarity=0.183  Sum_probs=70.5

Q ss_pred             CCCCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc
Q psy13164         54 NGNDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI  133 (193)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~  133 (193)
                      ....+.|..|++.|.....|..|++.|.                        ++|.|..|++.|.....|..|++ |.+.
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~------------------------~~~~C~~C~~~f~~~~~l~~H~~-H~~~   67 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR------------------------NAAVCPYCSLRFFSPELKQEHES-KCEY   67 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH------------------------HSBCCTTTCCCBSSHHHHHHHHH-HCST
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC------------------------CCccCCCCCCccCCHHHHHHHHH-cCCC
Confidence            3445667777777766666666655542                        25899999999999999999996 8887


Q ss_pred             -ceeccccchhccChhHHHHHHH-HhCCc-ccccc
Q psy13164        134 -RYKCDLCSKEYFHKGYLTDHKK-IHQGI-RYKCN  165 (193)
Q Consensus       134 -~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~  165 (193)
                       +|.|..|++.|.....|..|++ .|+++ +|.+.
T Consensus        68 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           68 KKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             GGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence             8999999999999999999997 88887 78765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.57  E-value=2.4e-15  Score=86.33  Aligned_cols=55  Identities=25%  Similarity=0.554  Sum_probs=48.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|.....|..|+++|++. +|.|..|++.|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            578899999999999999999988886 8999999999999999999999988765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.1e-15  Score=90.90  Aligned_cols=60  Identities=35%  Similarity=0.686  Sum_probs=39.8

Q ss_pred             hhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        129 RHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       129 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      +|.+. +|.|..|++.|.....|..|+++|++. ||.|..|++.|.....|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45554 666666666666666666666666655 6777777777777777777777666654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=7.3e-15  Score=93.17  Aligned_cols=83  Identities=22%  Similarity=0.452  Sum_probs=65.7

Q ss_pred             CCcccchhHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecccccccccChhHHHHHHHhhCC---
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG---  132 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---  132 (193)
                      ..+.|..|++.|.+...|..|+                      ++|.+.++|.|..|++.|.....|..|++.|.+   
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~----------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   63 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHK----------------------LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG   63 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHH----------------------HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCC
T ss_pred             CCeECCCCCCccCChHHHHHHH----------------------HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            4455666666665555555544                      444456679999999999999999999999987   


Q ss_pred             cceeccccchhccChhHHHHHHH-HhCCc
Q psy13164        133 IRYKCDLCSKEYFHKGYLTDHKK-IHQGI  160 (193)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  160 (193)
                      .+|.|..|++.|.....|..|++ .|.+.
T Consensus        64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           64 KPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999996 68764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=3.3e-15  Score=91.21  Aligned_cols=64  Identities=34%  Similarity=0.752  Sum_probs=59.2

Q ss_pred             hhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        101 ILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       101 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      .+.+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            445567899999999999999999999999987 899999999999999999999999997 8887

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=6.8e-15  Score=91.36  Aligned_cols=55  Identities=22%  Similarity=0.471  Sum_probs=39.5

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHH-HHcCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHK-KIHQGIR  188 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~-~~h~~~~  188 (193)
                      +|.|++|++.|.....|..|+++|+++ ||.|..|+++|.....|.+|+ ++|++|.
T Consensus        28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            577777777777777777777777765 777777777777777777775 4566653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.2e-14  Score=94.74  Aligned_cols=63  Identities=25%  Similarity=0.538  Sum_probs=55.8

Q ss_pred             hhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCC
Q psy13164         97 KLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus        97 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      .|+++|.+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|..
T Consensus        27 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           27 RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            3444555567799999999999999999999999987 89999999999999999999998865

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1e-14  Score=87.89  Aligned_cols=64  Identities=28%  Similarity=0.517  Sum_probs=59.1

Q ss_pred             hhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCcc
Q psy13164         98 LNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGIR  161 (193)
Q Consensus        98 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~  161 (193)
                      +.++|.+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|+++|
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            356778889999999999999999999999999987 8999999999999999999999998864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.5e-14  Score=92.12  Aligned_cols=68  Identities=13%  Similarity=0.146  Sum_probs=61.6

Q ss_pred             ccchhhhhhcCCCceecccccccc-cChhHHHHHHHhhCCc-ceeccccchhccChhHHHHH-HHHhCCccc
Q psy13164         94 KVGKLNKILHRGIRYKCDLCSKEY-FHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDH-KKIHQGIRY  162 (193)
Q Consensus        94 ~~~~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  162 (193)
                      .+..+++.+.+.++|.|..|++.| .....|..|+++| +. +|.|.+|++.|.....|..| +++|+++||
T Consensus        21 ~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           21 LEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             HHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            345677788888999999999999 9999999999999 76 89999999999999999999 899998754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.6e-15  Score=98.71  Aligned_cols=89  Identities=16%  Similarity=0.101  Sum_probs=68.3

Q ss_pred             hhhcccccccccCCCCccCCCCccc-------chhhhh--hcCCCc-eecccccccc--cChhHHHHHHHhhCCc-ceec
Q psy13164         71 DSTLKNESDHERRSINYNCQQSYKV-------GKLNKI--LHRGIR-YKCDLCSKEY--FHKGSLTEHKKRHQGI-RYKC  137 (193)
Q Consensus        71 ~~~~~h~~~~~~~~~~~~C~~c~~~-------~~~~~~--~~~~~~-~~C~~C~~~f--~~~~~l~~h~~~h~~~-~~~C  137 (193)
                      ..|..|++.|.. .++|.|+.|++.       ..|+++  +....+ +.|..|++.|  .....|..|+++|.+. ||.|
T Consensus         5 ~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            5 SSGKLYGSIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCC-CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             hhhhhheeeeCC-CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            446666665543 566777777763       345555  444444 4599999988  8999999999999987 8999


Q ss_pred             cccchhccChhHHHHHHHHhCCc
Q psy13164        138 DLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       138 ~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ..|++.|.....|..|+++|...
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCCc
Confidence            99999999999999999987654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=2.3e-14  Score=86.77  Aligned_cols=61  Identities=36%  Similarity=0.791  Sum_probs=56.2

Q ss_pred             hcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cc
Q psy13164        102 LHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RY  162 (193)
Q Consensus       102 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~  162 (193)
                      +.+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|+++ ||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            44567899999999999999999999999987 899999999999999999999999986 54

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.4e-14  Score=93.06  Aligned_cols=62  Identities=27%  Similarity=0.266  Sum_probs=56.7

Q ss_pred             CCc-ceeccccchhccChhHHHHHHH-Hh---CCc-ccccccCcccccChHHHHHH-HHHcCCCCCCCC
Q psy13164        131 QGI-RYKCDLCSKEYFHKGYLTDHKK-IH---QGI-RYKCNLCSKEFLRKDILIEH-KKIHQGIRFKCD  192 (193)
Q Consensus       131 ~~~-~~~C~~C~~~f~~~~~l~~H~~-~h---~~~-~~~C~~C~~~F~~~~~L~~H-~~~h~~~~~~~c  192 (193)
                      +|+ ||.|..|++.|...+.|..|++ .|   +++ ||.|..|+++|...+.|..| +++|+|++||.|
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C   82 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKL   82 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeC
Confidence            444 8999999999999999999998 58   445 89999999999999999999 899999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.8e-15  Score=90.96  Aligned_cols=61  Identities=23%  Similarity=0.501  Sum_probs=37.3

Q ss_pred             HHHHhhCCc-ceeccccchhccChhHHHHHHH-HhCC--cccccccCcccccChHHHHHHHHHcC
Q psy13164        125 EHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKK-IHQG--IRYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       125 ~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~-~h~~--~~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      +|+++|.+. ||.|..|++.|.....|..|++ .|.+  .+|.|..|++.|.....|..|+++|+
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            355555554 5666666666666666666665 4554  26666666666666666666666543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9e-15  Score=86.51  Aligned_cols=58  Identities=36%  Similarity=0.732  Sum_probs=37.3

Q ss_pred             hhCCc-ceeccccchhccChhHHHHHHHH-h-CCc-ccccccCcccccChHHHHHHHHHcCC
Q psy13164        129 RHQGI-RYKCDLCSKEYFHKGYLTDHKKI-H-QGI-RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       129 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~-h-~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      +|.+. ||.|..|++.|.....|..|+++ | .+. ||.|+.|++.|...+.|..|+++|+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            34444 56666666666666666666665 4 243 67777777777777777777666655

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.5e-14  Score=87.58  Aligned_cols=60  Identities=33%  Similarity=0.560  Sum_probs=56.4

Q ss_pred             ceeccc--cchhccChhHHHHHHH-HhCCc-cccccc--CcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKK-IHQGI-RYKCNL--CSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~-~h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|.|..  |++.|.....|..|++ .|++. +|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            788887  9999999999999999 79887 999999  999999999999999999999999883

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=1.9e-14  Score=91.27  Aligned_cols=60  Identities=22%  Similarity=0.301  Sum_probs=48.2

Q ss_pred             ceeccccchhccChhHHHHHHHH-hCCc-c--------cccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKI-HQGI-R--------YKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~--------~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .+.|..|++.|.....|..|+++ |.+. +        |.|..|++.|.....|..|+++|+|++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35677777777777777777776 6665 4        89999999999999999999999999999883

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.6e-14  Score=82.88  Aligned_cols=53  Identities=30%  Similarity=0.545  Sum_probs=39.2

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      +|.|..|++.|.....|..|+++|++. ||.|..|++.|.....|..|+++|++
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            677777777777777777777777765 77777777777777777777777653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.49  E-value=3.2e-14  Score=90.96  Aligned_cols=83  Identities=20%  Similarity=0.417  Sum_probs=67.4

Q ss_pred             CCCcccch--hHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecc--cccccccChhHHHHHHHhh
Q psy13164         55 GNDAVTRD--CLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCD--LCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus        55 ~~~~~c~~--c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h  130 (193)
                      ...+.|..  |++.|.....|..|++.                      |.+.++|.|.  .|++.|.....|..|+++|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   70 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRT----------------------HTGEKPYKCTWEGCDWRFARSDELTRHYRKH   70 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHH----------------------HSCCCCEECCSSSCCCEESSHHHHHHHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHH----------------------hCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence            34566664  77777666666555544                      4445678996  6999999999999999999


Q ss_pred             CCc-ceeccccchhccChhHHHHHHHHhCC
Q psy13164        131 QGI-RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       131 ~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      .+. +|.|..|++.|.....|..|+++|++
T Consensus        71 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           71 TGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             TSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            987 89999999999999999999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.49  E-value=3.8e-14  Score=88.67  Aligned_cols=81  Identities=20%  Similarity=0.394  Sum_probs=65.5

Q ss_pred             CCcccch--hHhhccCchhhcccccccccCCCCccCCCCcccchhhhhhcCCCceecc--cccccccChhHHHHHHHhhC
Q psy13164         56 NDAVTRD--CLEFFKSHDSTLKNESDHERRSINYNCQQSYKVGKLNKILHRGIRYKCD--LCSKEYFHKGSLTEHKKRHQ  131 (193)
Q Consensus        56 ~~~~c~~--c~~~f~~~~~~~~h~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~  131 (193)
                      ..+.|..  |++.|.....|..|+..                      |.+.++|.|+  .|++.|.....|..|++.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~----------------------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   61 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRT----------------------HTGEKPYHCDWDGCGWKFARSDELTRHYRKHT   61 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTT----------------------SCSSCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHh----------------------cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence            3456666  66666666666555444                      4455679997  69999999999999999999


Q ss_pred             Cc-ceeccccchhccChhHHHHHHHHhC
Q psy13164        132 GI-RYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       132 ~~-~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      +. +|.|..|++.|.....|..|+++|.
T Consensus        62 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           62 GHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            87 8999999999999999999999884

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.2e-14  Score=91.73  Aligned_cols=68  Identities=19%  Similarity=0.251  Sum_probs=62.7

Q ss_pred             cchhhhhhcCCCceeccccccccc-ChhHHHHHHHhhCC-c-ceeccccchhccChhHHHHHHHHhCCc-cc
Q psy13164         95 VGKLNKILHRGIRYKCDLCSKEYF-HKGSLTEHKKRHQG-I-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RY  162 (193)
Q Consensus        95 ~~~~~~~~~~~~~~~C~~C~~~f~-~~~~l~~h~~~h~~-~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~  162 (193)
                      ...|+++|.+.++|.|..|++.|. ....|..|+++|.+ . +|.|.+|++.|.....|..|+++|++. |+
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            467888888899999999999999 99999999999997 5 899999999999999999999999986 54

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=3.9e-14  Score=86.60  Aligned_cols=61  Identities=26%  Similarity=0.599  Sum_probs=37.5

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCC---c-ccccccCcccccChHHHHHHH-HHcCCCCCC
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG---I-RYKCNLCSKEFLRKDILIEHK-KIHQGIRFK  190 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~---~-~~~C~~C~~~F~~~~~L~~H~-~~h~~~~~~  190 (193)
                      |++. +|.|..|++.|.....|..|+++|++   . +|.|..|++.|.....|..|+ +.|.++++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3444 56666666666666666666666653   2 666666666666666666666 345555543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.6e-14  Score=81.76  Aligned_cols=54  Identities=35%  Similarity=0.853  Sum_probs=42.1

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHH-HHcCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHK-KIHQGI  187 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~-~~h~~~  187 (193)
                      ||.|..|++.|.....|..|+++|++. +|.|..|++.|.....|..|+ ++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            577888888888888888888887776 788888888888888888885 567664

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=7.6e-14  Score=83.48  Aligned_cols=59  Identities=29%  Similarity=0.414  Sum_probs=55.3

Q ss_pred             hcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc
Q psy13164        102 LHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       102 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      +.+.++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|+++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            45678899999999999999999999999987 899999999999999999999999886

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.46  E-value=1.5e-14  Score=90.53  Aligned_cols=62  Identities=10%  Similarity=0.153  Sum_probs=54.9

Q ss_pred             hhhhhhcCCCceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhC
Q psy13164         97 KLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus        97 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      .|+++|.+.++|.|..|++.|.....|..|++.|++.+|.|..|++.|.....|..|++.+.
T Consensus        21 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           21 THIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            44555566678999999999999999999999999879999999999999999999998653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=9.4e-14  Score=84.66  Aligned_cols=67  Identities=18%  Similarity=0.427  Sum_probs=59.8

Q ss_pred             ccchhhhhhcCCCceecccccccccChhHHHHHHH-hhCC--cceeccccchhccChhHHHHHHHHhCCc
Q psy13164         94 KVGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKK-RHQG--IRYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus        94 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      .+..|+++|.+.++|.|..|++.|.....|..|++ .|.+  .+|.|..|++.|.....|..|+++|++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            34678889999999999999999999999999997 6776  3899999999999999999999987653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.45  E-value=7.2e-14  Score=80.03  Aligned_cols=55  Identities=27%  Similarity=0.475  Sum_probs=49.3

Q ss_pred             CCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCC
Q psy13164        105 GIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       105 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      .++|.|..|++.|.....|..|+++|.+. ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46799999999999999999999999987 89999999999999999999999864

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=9.9e-14  Score=81.92  Aligned_cols=60  Identities=30%  Similarity=0.600  Sum_probs=54.8

Q ss_pred             hhhcCCCceecccccccccChhHHHHHHHh-h-CCc-ceeccccchhccChhHHHHHHHHhCC
Q psy13164        100 KILHRGIRYKCDLCSKEYFHKGSLTEHKKR-H-QGI-RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       100 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h-~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ++|.+.++|.|..|++.|.....|..|++. | .+. +|.|..|++.|.....|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            567788999999999999999999999998 6 355 89999999999999999999999876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=1.2e-13  Score=85.65  Aligned_cols=61  Identities=18%  Similarity=0.411  Sum_probs=54.3

Q ss_pred             hhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHH-HhCCc
Q psy13164        100 KILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKK-IHQGI  160 (193)
Q Consensus       100 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~-~h~~~  160 (193)
                      ..+...++|.|++|++.|.+...|..|+++|++. ||.|.+|++.|.....|..|++ .|+++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3445567799999999999999999999999987 9999999999999999999975 68764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.41  E-value=2.3e-13  Score=77.87  Aligned_cols=54  Identities=28%  Similarity=0.588  Sum_probs=51.1

Q ss_pred             ceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            589999999999999999999999987 899999999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.40  E-value=3.3e-13  Score=83.48  Aligned_cols=60  Identities=23%  Similarity=0.361  Sum_probs=52.9

Q ss_pred             hhhhhhcCCCceeccc--ccccccChhHHHHHHHhhCCcceeccc---cchhccChhHHHHHHHHhC
Q psy13164         97 KLNKILHRGIRYKCDL--CSKEYFHKGSLTEHKKRHQGIRYKCDL---CSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus        97 ~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~C~~---C~~~f~~~~~l~~H~~~h~  158 (193)
                      .|+++|.+.++|.|+.  |++.|.....|..|+++|.+  |.|..   |++.|.....|..|+++|+
T Consensus        21 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           21 VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            3444555667799988  99999999999999999998  99999   9999999999999999874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.5e-16  Score=93.91  Aligned_cols=63  Identities=19%  Similarity=0.328  Sum_probs=29.3

Q ss_pred             HHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCcccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        124 TEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       124 ~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ..|+++|.+. +|.|..|++.|.....|..      ..+|.|..|++.|...+.|..|+++|+|++||.|
T Consensus         7 ~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            7 GKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             HHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            3344444433 4444444444444444433      2245555555555555555555555555554444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.3e-13  Score=81.94  Aligned_cols=56  Identities=30%  Similarity=0.708  Sum_probs=41.3

Q ss_pred             hCCc-ceecc--ccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcC
Q psy13164        130 HQGI-RYKCD--LCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       130 h~~~-~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      |.+. +|.|+  .|++.|.....|..|+++|++. +|.|..|++.|.....|..|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3444 67776  4777777777777777777765 7778888888877777877777764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=6.4e-13  Score=76.83  Aligned_cols=55  Identities=27%  Similarity=0.728  Sum_probs=50.8

Q ss_pred             CceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHH-HHhCCc
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHK-KIHQGI  160 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~-~~h~~~  160 (193)
                      ++|.|..|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+ ++|++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4699999999999999999999999987 899999999999999999997 678764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.36  E-value=4.5e-13  Score=89.68  Aligned_cols=59  Identities=22%  Similarity=0.353  Sum_probs=55.0

Q ss_pred             hhcCCCceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCc
Q psy13164        101 ILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       101 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      .|++.++|.|..|++.|.....|..|+++| ..||.|..|++.|.....|..|+++|+|.
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            467788999999999999999999999999 55999999999999999999999999875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.33  E-value=2.4e-13  Score=77.05  Aligned_cols=51  Identities=14%  Similarity=0.107  Sum_probs=46.4

Q ss_pred             chhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCC
Q psy13164        141 SKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKC  191 (193)
Q Consensus       141 ~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~  191 (193)
                      ++.|.....|..|+++|++. +|.|..|++.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            46788888999999999987 9999999999999999999999999999873

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=6.6e-13  Score=78.44  Aligned_cols=54  Identities=19%  Similarity=0.300  Sum_probs=41.8

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccc-cCcccccChHHHHHHHHHcCCCCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN-LCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~-~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      ||.|..|++.|. ...|..|+++ ++. ||.|. .|++.|...+.|..|+++|...+|
T Consensus        10 ~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           10 TQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            677888888888 7778888777 665 78888 788888888888888888776654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.1e-12  Score=80.09  Aligned_cols=59  Identities=22%  Similarity=0.568  Sum_probs=53.1

Q ss_pred             hcCCCceecccccccccChhHHHHHHHhhCC---c-ceeccccchhccChhHHHHHHH-HhCCc
Q psy13164        102 LHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG---I-RYKCDLCSKEYFHKGYLTDHKK-IHQGI  160 (193)
Q Consensus       102 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~-~~~C~~C~~~f~~~~~l~~H~~-~h~~~  160 (193)
                      |.+.++|.|..|++.|.....|..|+++|.+   . +|.|..|++.|.....|..|++ .|.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            5678899999999999999999999999984   3 8999999999999999999995 56554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.3e-14  Score=87.31  Aligned_cols=67  Identities=19%  Similarity=0.303  Sum_probs=58.7

Q ss_pred             cchhhhhhcCCCceecccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164         95 VGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus        95 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +..|+++|.+.++|.|..|++.|.....|..      ..+|.|..|++.|.....|..|+++|+++ +|.|..|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4567777888888999999999998887776      45899999999999999999999999987 9999887

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=1.6e-12  Score=82.19  Aligned_cols=59  Identities=20%  Similarity=0.276  Sum_probs=54.8

Q ss_pred             ceecccccccccChhHHHHHHHh-hCCc-c--------eeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKR-HQGI-R--------YKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~-~--------~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      .+.|..|++.|.....|..|+++ |.+. +        |.|..|++.|.....|..|+++|+++ ||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            37899999999999999999998 8876 5        89999999999999999999999997 99986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.1e-12  Score=77.70  Aligned_cols=59  Identities=24%  Similarity=0.603  Sum_probs=53.2

Q ss_pred             hhhcCCCceecc--cccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhC
Q psy13164        100 KILHRGIRYKCD--LCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       100 ~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      .++.+.++|.|+  .|++.|.....|..|+++|.+. +|.|..|++.|.....|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345567789997  6999999999999999999987 8999999999999999999999885

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.27  E-value=1.2e-12  Score=69.98  Aligned_cols=41  Identities=34%  Similarity=0.516  Sum_probs=36.4

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45678886 899999999999999999999999999999884

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=69.57  Aligned_cols=40  Identities=23%  Similarity=0.407  Sum_probs=36.0

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45678886 99999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.9e-12  Score=70.73  Aligned_cols=41  Identities=29%  Similarity=0.450  Sum_probs=32.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. +|.|..|++.|...+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            366677776 78888888888888888888888888887777

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.9e-12  Score=70.70  Aligned_cols=42  Identities=29%  Similarity=0.439  Sum_probs=36.2

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            367788886 899999999999999999999999999988884

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=70.47  Aligned_cols=41  Identities=29%  Similarity=0.524  Sum_probs=36.6

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|+++ ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            66788886 899999999999999999999999999999884

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=1.5e-12  Score=71.16  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=35.9

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366778876 899999999999999999999999999988873

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.24  E-value=1.9e-12  Score=70.75  Aligned_cols=42  Identities=26%  Similarity=0.510  Sum_probs=32.9

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            366677776 788888888888888888888888888887773

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=8.1e-13  Score=70.70  Aligned_cols=40  Identities=30%  Similarity=0.555  Sum_probs=36.8

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66788887 99999999999999999999999999999987

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-12  Score=70.13  Aligned_cols=42  Identities=29%  Similarity=0.434  Sum_probs=37.4

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            467788887 999999999999999999999999999999884

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=71.03  Aligned_cols=42  Identities=29%  Similarity=0.434  Sum_probs=36.0

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            366778876 899999999999999999999999999988883

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.8e-12  Score=70.76  Aligned_cols=42  Identities=21%  Similarity=0.451  Sum_probs=37.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            467788887 899999999999999999999999999999884

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-12  Score=70.89  Aligned_cols=42  Identities=26%  Similarity=0.478  Sum_probs=37.2

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            467788887 899999999999999999999999999999884

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=71.14  Aligned_cols=42  Identities=31%  Similarity=0.519  Sum_probs=36.6

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            367788886 899999999999999999999999999998883

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-12  Score=70.84  Aligned_cols=42  Identities=29%  Similarity=0.492  Sum_probs=36.5

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788886 899999999999999999999999999998883

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=70.36  Aligned_cols=42  Identities=31%  Similarity=0.471  Sum_probs=37.8

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            467788887 999999999999999999999999999999884

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=71.28  Aligned_cols=42  Identities=29%  Similarity=0.498  Sum_probs=34.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            366778776 888888888888888888888888888888773

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-12  Score=70.69  Aligned_cols=42  Identities=31%  Similarity=0.493  Sum_probs=33.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            356677776 888888888888888888888888888888773

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.8e-12  Score=70.08  Aligned_cols=42  Identities=19%  Similarity=0.419  Sum_probs=37.6

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|+++ ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            467788887 999999999999999999999999999999884

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-12  Score=71.06  Aligned_cols=42  Identities=24%  Similarity=0.441  Sum_probs=36.0

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367778876 899999999999999999999999999988883

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-12  Score=71.04  Aligned_cols=42  Identities=33%  Similarity=0.472  Sum_probs=35.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            467778876 899999999999999999999999999988873

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-12  Score=71.05  Aligned_cols=42  Identities=33%  Similarity=0.574  Sum_probs=36.4

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788886 899999999999999999999999999998884

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-12  Score=70.69  Aligned_cols=42  Identities=31%  Similarity=0.525  Sum_probs=35.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366778876 899999999999999999999999999988874

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=1.9e-12  Score=70.72  Aligned_cols=42  Identities=21%  Similarity=0.320  Sum_probs=33.8

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            366777776 888888888888888888888888888888773

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.23  E-value=2.4e-12  Score=68.83  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=36.1

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            55678876 99999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=70.84  Aligned_cols=41  Identities=27%  Similarity=0.539  Sum_probs=30.9

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            356667765 77788888888877788888777877777776

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=70.49  Aligned_cols=42  Identities=31%  Similarity=0.559  Sum_probs=32.8

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            356677776 788888888888888888888888888887773

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.4e-12  Score=70.28  Aligned_cols=41  Identities=27%  Similarity=0.514  Sum_probs=32.6

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            56677776 788888888888888888888888888887773

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=70.37  Aligned_cols=42  Identities=21%  Similarity=0.413  Sum_probs=32.8

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            356677776 788888888888888888888888888887773

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.9e-12  Score=69.29  Aligned_cols=40  Identities=25%  Similarity=0.469  Sum_probs=36.5

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56778887 99999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=1.7e-12  Score=70.84  Aligned_cols=42  Identities=29%  Similarity=0.532  Sum_probs=33.0

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            366677776 788888888888888888888888888888773

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=70.86  Aligned_cols=42  Identities=31%  Similarity=0.488  Sum_probs=36.8

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            367788886 899999999999999999999999999998884

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=70.49  Aligned_cols=40  Identities=33%  Similarity=0.554  Sum_probs=29.7

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            55667665 77777777777777777777777777777766

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.4e-12  Score=70.24  Aligned_cols=41  Identities=34%  Similarity=0.485  Sum_probs=31.9

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            356677776 78888888888888888888888888887776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.3e-12  Score=69.62  Aligned_cols=40  Identities=23%  Similarity=0.390  Sum_probs=29.0

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34566665 77777777777777777777777777777766

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=70.65  Aligned_cols=42  Identities=26%  Similarity=0.433  Sum_probs=36.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366778876 899999999999999999999999999988883

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=70.56  Aligned_cols=42  Identities=29%  Similarity=0.526  Sum_probs=36.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366788887 899999999999999999999999999998884

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=70.52  Aligned_cols=40  Identities=33%  Similarity=0.513  Sum_probs=30.3

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            56667765 77777777777777777777777777777776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.22  E-value=1.8e-12  Score=70.77  Aligned_cols=41  Identities=39%  Similarity=0.612  Sum_probs=31.4

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            356677776 78888888888888888888888888887776

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.8e-12  Score=70.75  Aligned_cols=42  Identities=31%  Similarity=0.529  Sum_probs=36.3

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            367788876 899999999999999999999999999998883

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.5e-12  Score=70.23  Aligned_cols=42  Identities=29%  Similarity=0.546  Sum_probs=36.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            367788876 899999999999999999999999999988873

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=70.53  Aligned_cols=40  Identities=33%  Similarity=0.538  Sum_probs=29.9

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            55667765 77777777777777777777777777777776

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.3e-12  Score=70.35  Aligned_cols=41  Identities=29%  Similarity=0.553  Sum_probs=31.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            356667766 78888888888888888888888888777776

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=70.04  Aligned_cols=42  Identities=29%  Similarity=0.473  Sum_probs=36.5

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366778886 899999999999999999999999999998884

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.5e-12  Score=70.23  Aligned_cols=41  Identities=32%  Similarity=0.500  Sum_probs=32.1

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677776 788888888888888888888888888887773

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.3e-12  Score=70.38  Aligned_cols=40  Identities=38%  Similarity=0.610  Sum_probs=30.5

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            56667765 77787788888777778778777777777776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.22  E-value=2.8e-12  Score=70.00  Aligned_cols=40  Identities=30%  Similarity=0.483  Sum_probs=30.3

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            55667765 77777777777777777777777777777776

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.6e-12  Score=69.56  Aligned_cols=40  Identities=28%  Similarity=0.443  Sum_probs=36.4

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56778887 99999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.22  E-value=9e-12  Score=74.67  Aligned_cols=51  Identities=33%  Similarity=0.778  Sum_probs=35.7

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCCc-cccccc--CcccccChHHHHHHHHHc
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQGI-RYKCNL--CSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h  184 (193)
                      +|.|..  |++.|.....|..|+++|++. ||.|..  |++.|.....|..|+++|
T Consensus        17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            567766  777777777777777777665 677753  777777777777776654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=70.13  Aligned_cols=42  Identities=33%  Similarity=0.459  Sum_probs=36.6

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788876 899999999999999999999999999998883

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-12  Score=70.47  Aligned_cols=42  Identities=31%  Similarity=0.457  Sum_probs=36.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788886 899999999999999999999999999998884

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.2e-12  Score=70.39  Aligned_cols=41  Identities=27%  Similarity=0.388  Sum_probs=32.1

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            356677776 78888888888888888888888888888777

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=69.57  Aligned_cols=42  Identities=33%  Similarity=0.495  Sum_probs=37.9

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            467888887 999999999999999999999999999999884

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.1e-12  Score=70.47  Aligned_cols=42  Identities=29%  Similarity=0.514  Sum_probs=36.3

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            367788876 899999999999999999999999999988884

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.1e-12  Score=70.52  Aligned_cols=41  Identities=29%  Similarity=0.470  Sum_probs=30.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            356667765 77777777777777777777777777777776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.9e-12  Score=70.67  Aligned_cols=40  Identities=33%  Similarity=0.576  Sum_probs=30.3

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            56667765 77777777777777777777777777777776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.1e-12  Score=69.77  Aligned_cols=40  Identities=28%  Similarity=0.493  Sum_probs=30.2

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            56667765 77777777777777777777777777777776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.2e-12  Score=70.46  Aligned_cols=40  Identities=33%  Similarity=0.505  Sum_probs=30.5

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            55667765 77888888888888888888777877777776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=70.04  Aligned_cols=40  Identities=33%  Similarity=0.537  Sum_probs=30.1

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            56667765 77777777777777777777777777777776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.2e-12  Score=70.42  Aligned_cols=40  Identities=23%  Similarity=0.390  Sum_probs=30.0

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56667765 77777777777777777777777777777766

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.4e-12  Score=69.55  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=37.6

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            467788887 999999999999999999999999999999884

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=69.67  Aligned_cols=42  Identities=24%  Similarity=0.467  Sum_probs=32.6

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366777776 788888888888888888888888888877773

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-12  Score=69.96  Aligned_cols=41  Identities=29%  Similarity=0.528  Sum_probs=36.2

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            56778886 899999999999999999999999999998883

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.1e-12  Score=70.56  Aligned_cols=41  Identities=34%  Similarity=0.440  Sum_probs=30.2

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            356667765 77777777777777777777777777777766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.3e-12  Score=70.35  Aligned_cols=41  Identities=22%  Similarity=0.379  Sum_probs=31.5

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      +|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            356677776 78888888888888888888888888887776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=69.43  Aligned_cols=40  Identities=30%  Similarity=0.467  Sum_probs=31.9

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCC
Confidence            56677776 78888888888888888888888888888777

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.8e-12  Score=69.46  Aligned_cols=41  Identities=27%  Similarity=0.415  Sum_probs=33.3

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677776 888888888888888888888888888888773

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.2e-12  Score=69.71  Aligned_cols=42  Identities=29%  Similarity=0.524  Sum_probs=36.0

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            367788876 899999999999999999999999999988874

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3e-12  Score=69.87  Aligned_cols=40  Identities=28%  Similarity=0.399  Sum_probs=30.4

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56667765 77787788888777777778777777777776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.7e-12  Score=70.02  Aligned_cols=41  Identities=32%  Similarity=0.542  Sum_probs=32.2

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            356677776 78888888888888888888888888887777

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.8e-12  Score=69.48  Aligned_cols=41  Identities=24%  Similarity=0.339  Sum_probs=32.6

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56677776 888888888888888888888888888888773

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=69.40  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=31.4

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            56667775 788888888888888888888888888877773

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.7e-12  Score=69.52  Aligned_cols=40  Identities=28%  Similarity=0.479  Sum_probs=31.2

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56667776 78888888888888888888888888887776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.9e-12  Score=69.00  Aligned_cols=40  Identities=23%  Similarity=0.345  Sum_probs=30.2

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            55667765 77777777777777777777777777777776

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3e-12  Score=69.84  Aligned_cols=42  Identities=29%  Similarity=0.480  Sum_probs=36.7

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788886 899999999999999999999999999998884

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.19  E-value=4.2e-12  Score=69.25  Aligned_cols=40  Identities=25%  Similarity=0.517  Sum_probs=31.6

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCC
Confidence            56677776 78888888888888888888888888887776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.3e-12  Score=68.87  Aligned_cols=40  Identities=23%  Similarity=0.418  Sum_probs=30.6

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            55667765 78888888888888888888888888777776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.3e-12  Score=69.69  Aligned_cols=40  Identities=33%  Similarity=0.543  Sum_probs=29.8

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCC
Confidence            55667765 77777777777777777777777777777776

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.6e-12  Score=69.15  Aligned_cols=41  Identities=24%  Similarity=0.524  Sum_probs=36.3

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56678886 899999999999999999999999999999884

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.2e-12  Score=70.43  Aligned_cols=40  Identities=30%  Similarity=0.535  Sum_probs=30.7

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            56667766 78888888888888888888888887777776

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.5e-12  Score=68.13  Aligned_cols=41  Identities=24%  Similarity=0.366  Sum_probs=36.5

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            56678876 899999999999999999999999999999884

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.5e-12  Score=69.20  Aligned_cols=41  Identities=27%  Similarity=0.428  Sum_probs=31.8

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            55667776 788888888888888888888888888877773

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=4.7e-12  Score=69.11  Aligned_cols=40  Identities=28%  Similarity=0.484  Sum_probs=30.1

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. +|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            45667765 77777777777777777777777777777776

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-12  Score=69.99  Aligned_cols=41  Identities=29%  Similarity=0.391  Sum_probs=36.3

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367788886 89999999999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.5e-12  Score=70.22  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=36.5

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .|+++|++. ||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788887 899999999999999999999999999988883

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.4e-12  Score=70.28  Aligned_cols=42  Identities=17%  Similarity=0.266  Sum_probs=36.0

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|+++|+++ ||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367778876 899999999999999999999999999988884

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.3e-11  Score=71.68  Aligned_cols=55  Identities=18%  Similarity=0.297  Sum_probs=50.1

Q ss_pred             CCCceecccccccccChhHHHHHHHhhCCc-ceecc-ccchhccChhHHHHHHHHhCCc
Q psy13164        104 RGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCD-LCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       104 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~-~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      +.++|.|..|++.|. ...|..|+++ .+. ||.|. .|++.|...+.|..|+++|...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            456899999999999 9999999999 666 89999 9999999999999999998654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.2e-12  Score=69.26  Aligned_cols=40  Identities=33%  Similarity=0.436  Sum_probs=30.2

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            55667765 77777777777777777777777777777776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.4e-12  Score=70.28  Aligned_cols=40  Identities=23%  Similarity=0.477  Sum_probs=30.0

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCS
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            55667765 77777777777777777777777777777766

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.6e-12  Score=67.60  Aligned_cols=41  Identities=32%  Similarity=0.619  Sum_probs=36.6

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .|+++|++. ||.|.+|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367788887 99999999999999999999999999998876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=5.8e-12  Score=68.73  Aligned_cols=41  Identities=27%  Similarity=0.427  Sum_probs=35.6

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCC-CCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQG-IRFKCDL  193 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~-~~~~~c~  193 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            66778876 89999999999999999999999999 8988883

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.6e-12  Score=68.50  Aligned_cols=40  Identities=28%  Similarity=0.458  Sum_probs=28.2

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |+++|++. +|.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            45566665 77777777777777777777777777777766

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=67.97  Aligned_cols=40  Identities=28%  Similarity=0.489  Sum_probs=31.4

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHH-HcCCCCCCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKK-IHQGIRFKCD  192 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~-~h~~~~~~~c  192 (193)
                      |+++|++. ||.|..|++.|...+.|..|++ +|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            56677776 7888888888888888888888 7888887776

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.5e-11  Score=64.44  Aligned_cols=38  Identities=32%  Similarity=0.532  Sum_probs=34.3

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357776 99999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.8e-11  Score=66.70  Aligned_cols=42  Identities=24%  Similarity=0.408  Sum_probs=23.2

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445544 555555555555555555555555554 5555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.6e-11  Score=66.20  Aligned_cols=41  Identities=22%  Similarity=0.370  Sum_probs=24.1

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445544 566666666666666666666666654 5666554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.8e-11  Score=65.97  Aligned_cols=40  Identities=28%  Similarity=0.476  Sum_probs=34.3

Q ss_pred             HHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        154 KKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       154 ~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +++|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3567776 899999999999999999999999999988883

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=66.16  Aligned_cols=42  Identities=24%  Similarity=0.344  Sum_probs=24.0

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|++. ||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455544 566666666666666666666666554 5665544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.11  E-value=1.9e-11  Score=66.66  Aligned_cols=41  Identities=24%  Similarity=0.379  Sum_probs=21.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=6.7e-11  Score=70.78  Aligned_cols=55  Identities=27%  Similarity=0.666  Sum_probs=49.8

Q ss_pred             cCCCceeccc--ccccccChhHHHHHHHhhCCc-ceeccc--cchhccChhHHHHHHHHh
Q psy13164        103 HRGIRYKCDL--CSKEYFHKGSLTEHKKRHQGI-RYKCDL--CSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       103 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h  157 (193)
                      ...++|.|..  |++.|.....|..|+++|.+. +|.|.+  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4456799988  999999999999999999987 899975  999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2e-11  Score=66.50  Aligned_cols=42  Identities=29%  Similarity=0.447  Sum_probs=23.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|++. ||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34445544 556666666666666666666555554 5555554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=4.8e-11  Score=64.04  Aligned_cols=38  Identities=18%  Similarity=0.204  Sum_probs=33.1

Q ss_pred             HhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        156 IHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       156 ~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      +|++. +|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            56776 899999999999999999999999999998883

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=1.9e-11  Score=66.60  Aligned_cols=42  Identities=21%  Similarity=0.407  Sum_probs=23.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445544 556666666666666666666655554 5555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.1e-11  Score=66.39  Aligned_cols=42  Identities=26%  Similarity=0.463  Sum_probs=23.1

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445544 555555555555555555555555554 5555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=66.59  Aligned_cols=42  Identities=21%  Similarity=0.384  Sum_probs=22.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444 555555555555555555555555554 5555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=66.58  Aligned_cols=42  Identities=26%  Similarity=0.516  Sum_probs=23.3

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445544 555555555555555555555555554 5555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=66.77  Aligned_cols=41  Identities=27%  Similarity=0.426  Sum_probs=21.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            4 GSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444 555555555555555555555555554 5555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.2e-11  Score=66.30  Aligned_cols=42  Identities=21%  Similarity=0.419  Sum_probs=23.6

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445544 556666666666666666666555554 5555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=66.63  Aligned_cols=42  Identities=26%  Similarity=0.407  Sum_probs=22.9

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445444 555555555555555555555555554 5555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=66.66  Aligned_cols=42  Identities=21%  Similarity=0.274  Sum_probs=23.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|...+.|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34445544 555666666666666666665555554 5555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=66.57  Aligned_cols=42  Identities=26%  Similarity=0.458  Sum_probs=23.0

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34445544 555555555555555555555555554 5555544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.09  E-value=1.7e-11  Score=66.72  Aligned_cols=42  Identities=24%  Similarity=0.441  Sum_probs=23.1

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445544 555555555555555555555555554 5555554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.2e-11  Score=66.04  Aligned_cols=40  Identities=28%  Similarity=0.511  Sum_probs=34.0

Q ss_pred             HHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        154 KKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       154 ~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      .++|++. +|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3467776 899999999999999999999999999988884

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=65.82  Aligned_cols=42  Identities=21%  Similarity=0.449  Sum_probs=23.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445544 555555666665555566665555554 5555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=9.2e-11  Score=66.19  Aligned_cols=40  Identities=25%  Similarity=0.446  Sum_probs=24.2

Q ss_pred             ceeccccchhccChhHHHHHHH-HhCCc-ccccccCcccccC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK-IHQGI-RYKCNLCSKEFLR  173 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~~C~~~F~~  173 (193)
                      ||.|..|++.|.....|..|++ +|+++ ||.|.+|++.|.+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            5666666666666666666654 56554 6666666666643

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=63.56  Aligned_cols=41  Identities=27%  Similarity=0.514  Sum_probs=20.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3344443 455555555555555555555555544 5555544

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.7e-11  Score=65.42  Aligned_cols=38  Identities=32%  Similarity=0.559  Sum_probs=27.4

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ++|++. +|.|..|++.|...+.|..|+++|++++||.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            456665 77777777777777777777777777777766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=63.49  Aligned_cols=41  Identities=24%  Similarity=0.383  Sum_probs=21.7

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=63.48  Aligned_cols=41  Identities=27%  Similarity=0.519  Sum_probs=21.6

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=63.62  Aligned_cols=40  Identities=28%  Similarity=0.415  Sum_probs=19.8

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344443 455555555555555555555555544 5555444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.4e-11  Score=63.76  Aligned_cols=41  Identities=32%  Similarity=0.582  Sum_probs=21.5

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|...+.|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=63.19  Aligned_cols=41  Identities=29%  Similarity=0.403  Sum_probs=21.6

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=62.95  Aligned_cols=42  Identities=26%  Similarity=0.408  Sum_probs=22.3

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444 555555555555555555555555554 5555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.03  E-value=1.1e-10  Score=63.46  Aligned_cols=41  Identities=32%  Similarity=0.523  Sum_probs=21.8

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.6e-11  Score=63.72  Aligned_cols=41  Identities=27%  Similarity=0.447  Sum_probs=21.8

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=63.57  Aligned_cols=42  Identities=19%  Similarity=0.326  Sum_probs=22.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444 455555555555555555555555554 5555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.03  E-value=9.4e-11  Score=63.75  Aligned_cols=41  Identities=20%  Similarity=0.281  Sum_probs=21.1

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3444443 455555555555555555555555554 5555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.5e-11  Score=65.09  Aligned_cols=38  Identities=24%  Similarity=0.336  Sum_probs=27.7

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ++|++. +|.|..|++.|...+.|..|+++|++++||.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            456665 77777777777777777777777777777766

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.1e-10  Score=63.42  Aligned_cols=41  Identities=24%  Similarity=0.415  Sum_probs=20.8

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344443 455555555555555555555555544 5555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.6e-10  Score=62.83  Aligned_cols=40  Identities=20%  Similarity=0.422  Sum_probs=20.3

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344443 455555555555555555555555544 5555544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=63.15  Aligned_cols=41  Identities=24%  Similarity=0.441  Sum_probs=21.8

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=63.26  Aligned_cols=40  Identities=28%  Similarity=0.434  Sum_probs=20.2

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344443 455555555555555555555555544 5555444

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=63.32  Aligned_cols=41  Identities=22%  Similarity=0.327  Sum_probs=20.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344443 455555555555555555555555544 5555544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.8e-10  Score=62.63  Aligned_cols=41  Identities=17%  Similarity=0.271  Sum_probs=21.2

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444 455555555555555555555555554 5555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=62.91  Aligned_cols=41  Identities=22%  Similarity=0.281  Sum_probs=21.4

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=63.23  Aligned_cols=41  Identities=22%  Similarity=0.320  Sum_probs=21.3

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.3e-10  Score=63.19  Aligned_cols=41  Identities=22%  Similarity=0.306  Sum_probs=20.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344443 455555555555555555555555554 5555444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.02  E-value=1.3e-10  Score=63.13  Aligned_cols=41  Identities=22%  Similarity=0.412  Sum_probs=20.8

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3344443 455555555555555555555555544 5555544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.02  E-value=1.8e-10  Score=62.65  Aligned_cols=40  Identities=25%  Similarity=0.385  Sum_probs=20.0

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344443 455555555555555555555555544 5555444

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=63.42  Aligned_cols=41  Identities=27%  Similarity=0.468  Sum_probs=21.3

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2.1e-10  Score=64.66  Aligned_cols=46  Identities=24%  Similarity=0.333  Sum_probs=41.4

Q ss_pred             hhcCCCceecccccccccChhHHHHHHH-hhCCc-ceeccccchhccC
Q psy13164        101 ILHRGIRYKCDLCSKEYFHKGSLTEHKK-RHQGI-RYKCDLCSKEYFH  146 (193)
Q Consensus       101 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~-~~~C~~C~~~f~~  146 (193)
                      .+.+.++|.|..|++.|.....|..|++ +|.+. ||.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3556788999999999999999999997 89887 8999999999975

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=63.37  Aligned_cols=41  Identities=24%  Similarity=0.344  Sum_probs=21.0

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444 455555555555555555555555544 5555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=63.32  Aligned_cols=40  Identities=33%  Similarity=0.455  Sum_probs=19.4

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|++. ||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            344443 455555555555555555555555443 4555444

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=63.45  Aligned_cols=41  Identities=24%  Similarity=0.451  Sum_probs=21.4

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444 455555555555555555555555544 5555544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=63.10  Aligned_cols=40  Identities=25%  Similarity=0.404  Sum_probs=20.9

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344443 455555555555555555555555544 5555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=62.62  Aligned_cols=40  Identities=28%  Similarity=0.373  Sum_probs=19.8

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            334443 455555555555555555555555444 4555444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.99  E-value=8.6e-11  Score=66.30  Aligned_cols=49  Identities=16%  Similarity=0.172  Sum_probs=40.0

Q ss_pred             cccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cc
Q psy13164        114 SKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RY  162 (193)
Q Consensus       114 ~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~  162 (193)
                      ++.|.....|..|+++|.+. +|.|..|++.|...+.|..|+++|+++ ||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45677777788888888877 788888888888888888888888876 55

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.99  E-value=3.2e-10  Score=59.31  Aligned_cols=36  Identities=25%  Similarity=0.462  Sum_probs=30.6

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      |++. ||.|..|++.|...+.|..|+++|+|++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4555 89999999999999999999999999998865

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.1e-10  Score=62.29  Aligned_cols=40  Identities=28%  Similarity=0.481  Sum_probs=20.6

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNL  166 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  166 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 555543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1e-10  Score=63.57  Aligned_cols=41  Identities=27%  Similarity=0.459  Sum_probs=21.8

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555555554 5555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.98  E-value=8.3e-12  Score=72.73  Aligned_cols=46  Identities=15%  Similarity=0.444  Sum_probs=22.7

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccCh
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRK  174 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~  174 (193)
                      |+++|.+. ||.|+.|++.|.....|.   ++|++. ||.|..|++.|...
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            34444444 455555555555444443   445544 55555555555443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.97  E-value=1.4e-10  Score=61.78  Aligned_cols=37  Identities=27%  Similarity=0.531  Sum_probs=21.4

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|+++ ||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            345544 566666666666666666666666554 5555

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4e-10  Score=61.19  Aligned_cols=40  Identities=25%  Similarity=0.399  Sum_probs=20.1

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNL  166 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  166 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3344443 455555555555555555555555544 555543

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=4.4e-10  Score=60.74  Aligned_cols=32  Identities=34%  Similarity=0.585  Sum_probs=16.3

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      ||.|..|++.|...+.|..|+++|+++++|.|
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C   41 (45)
T 2epq_A           10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG   41 (45)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHccCCCCCCC
Confidence            45555555555555555555555555554444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=3.9e-10  Score=60.95  Aligned_cols=39  Identities=21%  Similarity=0.416  Sum_probs=22.2

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCc
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCS  168 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~  168 (193)
                      |++. ||.|..|++.|.....|..|+++|++. +|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3443 556666666666666666666666554 56665554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=61.93  Aligned_cols=41  Identities=22%  Similarity=0.346  Sum_probs=21.3

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHH-HhCCc-ccccccC
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKK-IHQGI-RYKCNLC  167 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~~C  167 (193)
                      +++|.+. ||.|..|++.|.....|..|++ +|++. ||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3444444 4555555555555555555555 55554 5555544

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=60.94  Aligned_cols=37  Identities=22%  Similarity=0.433  Sum_probs=21.7

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|++. ||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345544 566666666666666666666666554 5555

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=3.8e-10  Score=61.94  Aligned_cols=35  Identities=29%  Similarity=0.486  Sum_probs=16.0

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCS  168 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~  168 (193)
                      +|.|.+|++.|.....|..|+++|+++ ||.|.+|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            344444444444444444444444443 44444444

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.6e-10  Score=58.88  Aligned_cols=35  Identities=20%  Similarity=0.356  Sum_probs=30.4

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      ++|++. ||.|..|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457776 89999999999999999999999998875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=8e-10  Score=64.55  Aligned_cols=37  Identities=22%  Similarity=0.289  Sum_probs=30.0

Q ss_pred             hCCc-cccccc--CcccccChHHHHHHH-HHcCCCCCCCCC
Q psy13164        157 HQGI-RYKCNL--CSKEFLRKDILIEHK-KIHQGIRFKCDL  193 (193)
Q Consensus       157 h~~~-~~~C~~--C~~~F~~~~~L~~H~-~~h~~~~~~~c~  193 (193)
                      .+|+ ||.|..  |+++|...+.|..|+ ++|+++|||-|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3454 899965  999999999999997 689999988774

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.93  E-value=1.2e-10  Score=67.75  Aligned_cols=53  Identities=13%  Similarity=0.291  Sum_probs=45.4

Q ss_pred             cchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHH
Q psy13164         95 VGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYL  150 (193)
Q Consensus        95 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l  150 (193)
                      +..|+++|.+.++|.|+.|++.|.....|.   ++|.+. ||.|..|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            456788888999999999999999988776   788887 89999999999876654

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=62.95  Aligned_cols=39  Identities=26%  Similarity=0.480  Sum_probs=28.7

Q ss_pred             HHHhCCc-ccccc--cCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        154 KKIHQGI-RYKCN--LCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       154 ~~~h~~~-~~~C~--~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .++|++. +|.|.  .|++.|...+.|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3456665 77776  677777777777777777777777776

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=61.25  Aligned_cols=39  Identities=26%  Similarity=0.471  Sum_probs=21.2

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            33445444 555555555555555555555555554 5554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.2e-10  Score=62.17  Aligned_cols=40  Identities=28%  Similarity=0.500  Sum_probs=22.2

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445444 555555666665555666665555554 55554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.5e-10  Score=62.07  Aligned_cols=40  Identities=20%  Similarity=0.487  Sum_probs=22.5

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34445544 566666666666666666666666554 55554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2e-10  Score=62.48  Aligned_cols=39  Identities=23%  Similarity=0.270  Sum_probs=22.5

Q ss_pred             hhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        129 RHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       129 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +|.+. +|.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 566666666666666666666666554 5666554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.4e-11  Score=72.37  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=35.8

Q ss_pred             HHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        123 LTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       123 l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      |..|+..|.+. ++.|..|++.|. ...|..|+ .|.+. |+.|..|++.|. ...|..|+++|.+++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            33444444444 566666666663 56666666 55554 666666666655 356666666666543

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.5e-10  Score=60.31  Aligned_cols=34  Identities=35%  Similarity=0.563  Sum_probs=17.3

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +|.|..|++.|.....|..|+++|++. ||.|..|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           12 PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            455555555555555555555555544 4555444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.90  E-value=8.3e-10  Score=59.92  Aligned_cols=39  Identities=23%  Similarity=0.445  Sum_probs=19.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3344443 455555555555555555555555544 55553

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.6e-10  Score=61.27  Aligned_cols=39  Identities=28%  Similarity=0.551  Sum_probs=21.7

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            34445544 555666666666556666665555554 5555

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.7e-10  Score=61.89  Aligned_cols=40  Identities=30%  Similarity=0.484  Sum_probs=21.7

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444 555555555555555555555555554 55554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=8.5e-10  Score=59.87  Aligned_cols=39  Identities=26%  Similarity=0.403  Sum_probs=20.4

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             ccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3444444 455555555555555555555555554 55554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.89  E-value=4.8e-10  Score=57.83  Aligned_cols=35  Identities=31%  Similarity=0.586  Sum_probs=29.4

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      |+++|++. ||.|..|++.|...+.|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            56778876 889999999999888999998888874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=9.9e-10  Score=59.56  Aligned_cols=39  Identities=31%  Similarity=0.557  Sum_probs=20.0

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3344444 455555555555555555555555544 55553

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.4e-10  Score=59.90  Aligned_cols=38  Identities=29%  Similarity=0.525  Sum_probs=18.2

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|++. ||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344443 455555555555555555555555443 44443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.88  E-value=1.2e-09  Score=55.51  Aligned_cols=33  Identities=30%  Similarity=0.495  Sum_probs=28.5

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      |++. ||.|..|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5665 89999999999999999999999998875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.88  E-value=1.5e-09  Score=54.58  Aligned_cols=31  Identities=29%  Similarity=0.626  Sum_probs=28.0

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRFKC  191 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~  191 (193)
                      ||.|..|++.|...+.|..|+++|+|++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6889999999999999999999999999875

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=8.4e-10  Score=60.52  Aligned_cols=41  Identities=24%  Similarity=0.381  Sum_probs=37.4

Q ss_pred             hcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccch
Q psy13164        102 LHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSK  142 (193)
Q Consensus       102 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~  142 (193)
                      +...++|.|..|++.|.....|..|+++|+++ ||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45567899999999999999999999999987 899999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.88  E-value=4.7e-10  Score=59.59  Aligned_cols=37  Identities=22%  Similarity=0.402  Sum_probs=19.7

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344444 555555555555555555555555554 5544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=59.39  Aligned_cols=39  Identities=26%  Similarity=0.437  Sum_probs=20.1

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            3344444 455555555555555555555555554 55553

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=3.8e-10  Score=60.68  Aligned_cols=39  Identities=21%  Similarity=0.376  Sum_probs=22.3

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      |+++|.+. +|.|..|++.|.....|..|+++|+++ ||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34445544 566666666666666666666666554 5555

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1e-09  Score=59.47  Aligned_cols=38  Identities=24%  Similarity=0.437  Sum_probs=19.0

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344443 455555555555555555555555544 45543

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.9e-10  Score=59.76  Aligned_cols=39  Identities=28%  Similarity=0.494  Sum_probs=19.4

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            3344443 455555555555555555555555544 45543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9e-10  Score=59.72  Aligned_cols=39  Identities=28%  Similarity=0.612  Sum_probs=19.2

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            3344443 455555555555555555555555444 45543

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=59.21  Aligned_cols=39  Identities=28%  Similarity=0.566  Sum_probs=19.1

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            3344443 455555555555555555555555544 45443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.1e-09  Score=59.47  Aligned_cols=37  Identities=30%  Similarity=0.617  Sum_probs=18.0

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344443 455555555555555555555555443 4444

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1e-09  Score=59.51  Aligned_cols=38  Identities=32%  Similarity=0.480  Sum_probs=18.1

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|+++ ||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334433 455555555555555555555555443 44443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.86  E-value=1.4e-09  Score=55.25  Aligned_cols=33  Identities=24%  Similarity=0.460  Sum_probs=28.5

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      |++. ||.|..|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5665 89999999999999999999999998875

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=59.35  Aligned_cols=39  Identities=28%  Similarity=0.551  Sum_probs=19.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            3344443 455555555555555555555555544 55553

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=58.94  Aligned_cols=39  Identities=28%  Similarity=0.494  Sum_probs=20.0

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3344444 455555555555555555555555554 55553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.4e-09  Score=58.36  Aligned_cols=37  Identities=22%  Similarity=0.544  Sum_probs=17.7

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            344443 455555555555555555555555443 4444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.5e-10  Score=60.15  Aligned_cols=37  Identities=27%  Similarity=0.497  Sum_probs=19.6

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344444 555555555555555555555555554 5544

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-09  Score=59.19  Aligned_cols=38  Identities=32%  Similarity=0.613  Sum_probs=18.6

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      ++|.+. +|.|..|++.|.....|..|+++|+++ ||.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344443 455555555555555555555555444 45443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=59.11  Aligned_cols=39  Identities=31%  Similarity=0.569  Sum_probs=19.4

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3344443 455555555555555555555555544 45543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=4e-10  Score=59.92  Aligned_cols=37  Identities=27%  Similarity=0.553  Sum_probs=20.6

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|++. ||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444 556666666666666666665555554 5544

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.9e-10  Score=59.57  Aligned_cols=39  Identities=28%  Similarity=0.499  Sum_probs=20.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            3444444 555555555555555555555555554 55554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=58.89  Aligned_cols=40  Identities=20%  Similarity=0.421  Sum_probs=21.0

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33444444 555555555555555555555555554 55553

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=59.42  Aligned_cols=39  Identities=23%  Similarity=0.490  Sum_probs=20.7

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3444444 455555555555555555555555554 55554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=58.77  Aligned_cols=39  Identities=28%  Similarity=0.428  Sum_probs=20.6

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3444444 455555555555555555555555554 55553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4e-10  Score=60.55  Aligned_cols=39  Identities=26%  Similarity=0.376  Sum_probs=22.6

Q ss_pred             HHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        126 HKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       126 h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      |+++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34445544 566666666666666666666666554 5555

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=58.47  Aligned_cols=38  Identities=29%  Similarity=0.476  Sum_probs=18.2

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            4 GSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             ccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            3344443 455555555555555555555555443 4444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.3e-09  Score=59.09  Aligned_cols=39  Identities=21%  Similarity=0.386  Sum_probs=18.3

Q ss_pred             hhhhcCCCceecccccccccChhHHHHHHHhhCC-c-ceec
Q psy13164         99 NKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG-I-RYKC  137 (193)
Q Consensus        99 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-~-~~~C  137 (193)
                      +++|.+.++|.|..|++.|.....|..|+++|.+ . ||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            3344444444444454444444444444444444 3 4444

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=59.31  Aligned_cols=38  Identities=26%  Similarity=0.516  Sum_probs=19.0

Q ss_pred             HhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        128 KRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       128 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      ++|.+. ||.|..|++.|.....|..|+++|++. ||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344443 455555555555555555555555544 45543

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.79  E-value=2.9e-09  Score=56.84  Aligned_cols=36  Identities=14%  Similarity=0.257  Sum_probs=21.8

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      |.+. +|.|..|++.|.....|..|+++|++. ||.|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4444 566666666666666666666666655 66654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.9e-09  Score=57.12  Aligned_cols=36  Identities=22%  Similarity=0.444  Sum_probs=18.0

Q ss_pred             hhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        129 RHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       129 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      +|.+. +|.|..|++.|.....|..|+++|+++ ||.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34433 455555555555555555555555544 4544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.1e-09  Score=58.17  Aligned_cols=39  Identities=28%  Similarity=0.514  Sum_probs=19.7

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|++. ||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3344443 455555555555555555555555544 55543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=58.70  Aligned_cols=38  Identities=16%  Similarity=0.278  Sum_probs=18.7

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|++. ||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3344443 455555555555555555555555443 4544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.4e-09  Score=58.05  Aligned_cols=37  Identities=32%  Similarity=0.677  Sum_probs=18.3

Q ss_pred             hhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        129 RHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       129 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +|.+. +|.|..|++.|.....|..|+++|+++ ||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34443 455555555555555555555555544 45443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=57.62  Aligned_cols=38  Identities=32%  Similarity=0.601  Sum_probs=20.4

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3444444 555555555555555555555555554 5544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-09  Score=58.63  Aligned_cols=39  Identities=21%  Similarity=0.400  Sum_probs=19.9

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +++|.+. +|.|..|++.|.....|..|+++|+++ ||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444 455555555555555555555555544 55543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5e-09  Score=54.42  Aligned_cols=32  Identities=25%  Similarity=0.313  Sum_probs=25.4

Q ss_pred             hCCc-cccccc--CcccccChHHHHHHHHHcCCCC
Q psy13164        157 HQGI-RYKCNL--CSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       157 h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ++++ ||.|..  |+++|...+.|.+|+++|+|+.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4455 888875  8888888888888888888763

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4e-09  Score=57.56  Aligned_cols=34  Identities=18%  Similarity=0.399  Sum_probs=16.8

Q ss_pred             ceecc--ccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        134 RYKCD--LCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      +|.|.  .|++.|.....|..|+++|++. ||.|..|
T Consensus        12 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           12 PFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45554  4555555555555555555443 4555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=4.3e-09  Score=54.46  Aligned_cols=34  Identities=24%  Similarity=0.317  Sum_probs=29.4

Q ss_pred             hCCc-ccccc--cCcccccChHHHHHHHHHcCCCCCC
Q psy13164        157 HQGI-RYKCN--LCSKEFLRKDILIEHKKIHQGIRFK  190 (193)
Q Consensus       157 h~~~-~~~C~--~C~~~F~~~~~L~~H~~~h~~~~~~  190 (193)
                      |++. ||.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4555 89999  5999999999999999999999887

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=5.3e-09  Score=56.08  Aligned_cols=38  Identities=26%  Similarity=0.579  Sum_probs=18.5

Q ss_pred             HHhhCCc-ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        127 KKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       127 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      +++|.+. ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3344443 455555555555555555555555543 4443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.5e-09  Score=52.99  Aligned_cols=33  Identities=30%  Similarity=0.342  Sum_probs=27.0

Q ss_pred             HhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        156 IHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       156 ~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      +|++. ||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            35665 8888888888888888888888888764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.9e-09  Score=56.47  Aligned_cols=32  Identities=31%  Similarity=0.668  Sum_probs=16.3

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +|.|..|++.|.....|..|+++|+++ ||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           12 PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             SEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            455555555555555555555555544 45443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.5e-09  Score=53.71  Aligned_cols=33  Identities=18%  Similarity=0.306  Sum_probs=27.0

Q ss_pred             HhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        156 IHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       156 ~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      .|++. ||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35565 8889899999988888988988888765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.3e-09  Score=53.12  Aligned_cols=33  Identities=24%  Similarity=0.331  Sum_probs=27.1

Q ss_pred             HhCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        156 IHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       156 ~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      .|++. ||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            45665 8889889999988888888988888764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6.8e-09  Score=56.20  Aligned_cols=37  Identities=22%  Similarity=0.457  Sum_probs=20.2

Q ss_pred             hhCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        129 RHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       129 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      +|.+. +|.|..|++.|.....|..|+++|+++ ||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            34443 555555555555555555555555554 55553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.4e-09  Score=54.07  Aligned_cols=33  Identities=24%  Similarity=0.446  Sum_probs=26.8

Q ss_pred             HhCCc-ccccccCcccccCh-HHHHHHHHHcCCCC
Q psy13164        156 IHQGI-RYKCNLCSKEFLRK-DILIEHKKIHQGIR  188 (193)
Q Consensus       156 ~h~~~-~~~C~~C~~~F~~~-~~L~~H~~~h~~~~  188 (193)
                      +|++. ||.|..|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46665 88888888888888 88888888888764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=52.01  Aligned_cols=32  Identities=28%  Similarity=0.460  Sum_probs=26.9

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      |++. +|.|..|++.|.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5555 8899999999999999999999988875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=9.4e-10  Score=68.52  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=20.0

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCCc-ccccccC
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLC  167 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  167 (193)
                      |.+. ||.|..|++.|.....|..|+++|+++ ||.|..|
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ   59 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh
Confidence            4443 455555555555555555555555554 5555443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=5.1e-09  Score=53.95  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=25.8

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHH-HHHcCCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEH-KKIHQGI  187 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H-~~~h~~~  187 (193)
                      ++|+++ ||.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            356665 88888888888888888888 7888764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=6e-09  Score=62.85  Aligned_cols=63  Identities=17%  Similarity=0.176  Sum_probs=54.0

Q ss_pred             cchhhhhhcCCCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHhCCc
Q psy13164         95 VGKLNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus        95 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      +..|++++.+.+++.|..|+..|. ...|..|+ .|.+. |+.|..|++.|. ...|..|+++|++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            456677777888999999999995 88899999 77776 899999999887 58999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.6e-08  Score=51.53  Aligned_cols=32  Identities=28%  Similarity=0.482  Sum_probs=25.9

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      |.+. ||.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4454 8888888888888888888888888764

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.2e-08  Score=53.66  Aligned_cols=31  Identities=39%  Similarity=0.703  Sum_probs=16.7

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ||.|..|++.|.....|..|+++|+++ ||.|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A           10 VYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            455555555555555555555555554 4544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.64  E-value=1.1e-09  Score=54.60  Aligned_cols=30  Identities=30%  Similarity=0.514  Sum_probs=27.2

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRFK  190 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~  190 (193)
                      ||.|..|++.|...+.|..|+++|++++|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            688999999999999999999999999886

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=7.1e-10  Score=69.08  Aligned_cols=39  Identities=21%  Similarity=0.282  Sum_probs=35.7

Q ss_pred             HHHhCCc-ccccccCcccccChHHHHHHHHHcCCCCCCCC
Q psy13164        154 KKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRFKCD  192 (193)
Q Consensus       154 ~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~c  192 (193)
                      .++|++. ||.|..|++.|...+.|..|+++|++++||.|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            4568876 99999999999999999999999999999887

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=3.5e-09  Score=57.73  Aligned_cols=38  Identities=24%  Similarity=0.315  Sum_probs=30.1

Q ss_pred             HHHHHHhCCc-ccccc--cCcccccChHHHHHHHHHcCCCC
Q psy13164        151 TDHKKIHQGI-RYKCN--LCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       151 ~~H~~~h~~~-~~~C~--~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ..|+..|+++ ||.|.  .|++.|...+.|..|+++|+|++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445567776 89995  69999999999999999998875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.56  E-value=4.8e-08  Score=46.92  Aligned_cols=28  Identities=25%  Similarity=0.704  Sum_probs=23.2

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            5788888888888888888888888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.56  E-value=2.9e-08  Score=54.27  Aligned_cols=32  Identities=22%  Similarity=0.414  Sum_probs=19.1

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHH-HcCCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKK-IHQGIR  188 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~-~h~~~~  188 (193)
                      |++. ||.|.+|++.|.....|..|++ +|+|+.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4554 6666666666666666666666 666543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.55  E-value=3.2e-08  Score=50.81  Aligned_cols=32  Identities=25%  Similarity=0.453  Sum_probs=25.6

Q ss_pred             hCCc-cccccc--CcccccChHHHHHHHHHcCCCC
Q psy13164        157 HQGI-RYKCNL--CSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       157 h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      |++. ||.|..  |++.|...+.|..|+++|+|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4555 888884  8888888888888888888865

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.53  E-value=5.9e-08  Score=50.36  Aligned_cols=31  Identities=23%  Similarity=0.487  Sum_probs=19.7

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-cccc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKC  164 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  164 (193)
                      ||.|..|++.|...+.|..|+++|+++ ||.+
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            566666666666666666666666665 5543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.53  E-value=3.6e-08  Score=47.43  Aligned_cols=28  Identities=32%  Similarity=0.735  Sum_probs=22.2

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            5778888888888888888888887764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.53  E-value=5.1e-08  Score=49.87  Aligned_cols=33  Identities=21%  Similarity=0.429  Sum_probs=16.1

Q ss_pred             hhhhcCCCceecccccccccChhHHHHHHHhhC
Q psy13164         99 NKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQ  131 (193)
Q Consensus        99 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  131 (193)
                      .++|.+.++|.|+.|++.|.....|..|+++|.
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            334444444555555555555555555554444

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.53  E-value=5e-08  Score=46.08  Aligned_cols=27  Identities=37%  Similarity=0.936  Sum_probs=20.9

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||.|..|++.|...+.|..|+++|+|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            478888888888888888888888764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.52  E-value=4e-08  Score=47.19  Aligned_cols=28  Identities=36%  Similarity=0.675  Sum_probs=22.9

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|.....|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            6788888888888888888888888764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.51  E-value=6.3e-08  Score=47.46  Aligned_cols=28  Identities=39%  Similarity=0.823  Sum_probs=23.6

Q ss_pred             ccccc--cCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCN--LCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~--~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|.  .|++.|...+.|..|+++|+|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            67887  88888888888888888888875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=6e-08  Score=46.87  Aligned_cols=28  Identities=21%  Similarity=0.585  Sum_probs=23.0

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..|+++|+|++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            6788888888888888888888888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=8.5e-08  Score=46.31  Aligned_cols=29  Identities=21%  Similarity=0.336  Sum_probs=23.7

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      +|.|..|++.|...+.|..|+++|+++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            57888888888888888888888887653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=6.1e-08  Score=46.43  Aligned_cols=28  Identities=36%  Similarity=0.482  Sum_probs=22.5

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            5788888888888888888888887764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.9e-08  Score=48.50  Aligned_cols=28  Identities=32%  Similarity=0.697  Sum_probs=22.6

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            5788888888888888888888887764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.46  E-value=1.1e-07  Score=47.49  Aligned_cols=29  Identities=21%  Similarity=0.607  Sum_probs=19.1

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-cc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RY  162 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~  162 (193)
                      ||.|..|++.|...+.|..|+++|+++ +|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            466666666666666666666666665 44

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1.3e-07  Score=46.66  Aligned_cols=28  Identities=46%  Similarity=0.793  Sum_probs=23.3

Q ss_pred             ccccc--cCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCN--LCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~--~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|.  .|++.|...+.|..|+++|+|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            68888  78888888888888888888764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.42  E-value=1.8e-07  Score=54.68  Aligned_cols=35  Identities=20%  Similarity=0.359  Sum_probs=21.2

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCcccccccCc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGIRYKCNLCS  168 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~  168 (193)
                      ||.|..|++.|.....|..|+++|++....+..++
T Consensus        13 py~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A           13 ILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            56666666666666666666666666544444433

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.1e-07  Score=48.19  Aligned_cols=26  Identities=31%  Similarity=0.422  Sum_probs=14.9

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..  |++.|...+.|..|+++|++
T Consensus         9 p~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            9 LLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            555554  55555555555555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=1.4e-07  Score=45.64  Aligned_cols=28  Identities=50%  Similarity=1.062  Sum_probs=23.4

Q ss_pred             ccccccCcccccChHHHHHH-HHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEH-KKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H-~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..| +++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            68888888888888888888 68888764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=4.4e-08  Score=47.45  Aligned_cols=28  Identities=32%  Similarity=0.695  Sum_probs=22.4

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            6788888888888888888888887764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.1e-07  Score=47.51  Aligned_cols=30  Identities=20%  Similarity=0.479  Sum_probs=15.9

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCC
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      |.+. ||.|..|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            3433 45555555555555555555555554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.37  E-value=1.4e-07  Score=48.20  Aligned_cols=21  Identities=29%  Similarity=0.591  Sum_probs=14.4

Q ss_pred             ccccccCcccccChHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHK  181 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~  181 (193)
                      ||.|..|+++|.+.++|.+|+
T Consensus         8 p~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCEETTTTEECSCHHHHHHHH
T ss_pred             CeECCCCCCccCCHhHccCcC
Confidence            666666666666666666666

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.9e-07  Score=44.37  Aligned_cols=26  Identities=35%  Similarity=0.813  Sum_probs=18.9

Q ss_pred             ccccccCcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ||.|..|++.|...+.|..|+++|+|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcCC
Confidence            57777777777777777777777764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=3e-07  Score=53.73  Aligned_cols=35  Identities=17%  Similarity=0.183  Sum_probs=18.9

Q ss_pred             CCCceeccc--ccccccChhHHHHHH-HhhCCc-ceecc
Q psy13164        104 RGIRYKCDL--CSKEYFHKGSLTEHK-KRHQGI-RYKCD  138 (193)
Q Consensus       104 ~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~~-~~~C~  138 (193)
                      +.+||+|..  |++.|.+..+|..|+ ++|++. |+.|.
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            445555543  555555555555554 345554 55554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.34  E-value=4.3e-07  Score=45.56  Aligned_cols=26  Identities=31%  Similarity=0.602  Sum_probs=14.2

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      +|.|..|++.|.....|..|+++|++
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            7 GYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CeECCCCcchhCCHHHHHHHHHHHcC
Confidence            45555555555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.32  E-value=3.2e-07  Score=43.22  Aligned_cols=25  Identities=20%  Similarity=0.534  Sum_probs=18.0

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|..|++.|...+.|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHcc
Confidence            5777777777777777777777664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.31  E-value=4.6e-07  Score=45.52  Aligned_cols=26  Identities=23%  Similarity=0.590  Sum_probs=14.1

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         7 ~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            7 PFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            45555555555555555555555544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3.5e-07  Score=46.78  Aligned_cols=30  Identities=27%  Similarity=0.492  Sum_probs=14.6

Q ss_pred             hcCCCceecccccccccChhHHHHH-HHhhC
Q psy13164        102 LHRGIRYKCDLCSKEYFHKGSLTEH-KKRHQ  131 (193)
Q Consensus       102 ~~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~  131 (193)
                      |.+.++|.|..|++.|.....|..| ++.|+
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            3344445555555555555555555 44444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=2.5e-07  Score=43.75  Aligned_cols=25  Identities=24%  Similarity=0.490  Sum_probs=18.0

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|..|++.|...+.|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhcC
Confidence            6777777777777777777777664

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=8.1e-07  Score=51.86  Aligned_cols=37  Identities=19%  Similarity=0.368  Sum_probs=22.2

Q ss_pred             cCCCceecccccccccChhHHHHHHHhhCCcceeccc
Q psy13164        103 HRGIRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDL  139 (193)
Q Consensus       103 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~  139 (193)
                      ..+++|.|..|++.|.+...|..|+++|++....+..
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~   45 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGY   45 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCS
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccc
Confidence            3455666666666666666666666666665333333

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=8.8e-07  Score=44.78  Aligned_cols=26  Identities=31%  Similarity=0.537  Sum_probs=13.3

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            9 PFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcc
Confidence            45555555555555555555555443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=9.9e-07  Score=44.51  Aligned_cols=26  Identities=38%  Similarity=0.584  Sum_probs=13.6

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHccC
Confidence            45555555555555555555555544

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=7.5e-07  Score=45.04  Aligned_cols=26  Identities=19%  Similarity=0.534  Sum_probs=13.3

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhcC
Confidence            45555555555555555555555443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=7.9e-07  Score=44.88  Aligned_cols=26  Identities=38%  Similarity=0.786  Sum_probs=14.6

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      +|.|..|++.|.....|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            9 THLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CeecCcCCCCcCchHHHHHHHHHhcC
Confidence            45555555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=7e-07  Score=45.46  Aligned_cols=26  Identities=27%  Similarity=0.546  Sum_probs=12.9

Q ss_pred             ceeccccchhccCh-hHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHK-GYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~-~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|... ..|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            9 AMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CeECCCCChhhccCHHHHHHHHHhcCC
Confidence            45555555555554 455555554443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.21  E-value=6.6e-07  Score=48.69  Aligned_cols=31  Identities=29%  Similarity=0.505  Sum_probs=16.8

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHH-HhCCc
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKK-IHQGI  160 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~-~h~~~  160 (193)
                      |++. ||.|..|++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            3443 5555556655555555555655 55553

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.2e-07  Score=43.44  Aligned_cols=25  Identities=32%  Similarity=0.737  Sum_probs=17.1

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|..|++.|...+.|..|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            5667777777777777777766653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.17  E-value=6.9e-07  Score=41.89  Aligned_cols=26  Identities=35%  Similarity=0.952  Sum_probs=15.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35566666666666666666666554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=9.8e-07  Score=45.18  Aligned_cols=27  Identities=22%  Similarity=0.485  Sum_probs=15.9

Q ss_pred             ceecc--ccchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCD--LCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|.  .|++.|...+.|..|+++|++.
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   34 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKHKHEMT   34 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHHTT
T ss_pred             ceECCCCCCCcccCCHHHHHHHHHHhCCC
Confidence            56665  3666666666666666666554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.16  E-value=1e-06  Score=41.99  Aligned_cols=26  Identities=42%  Similarity=0.810  Sum_probs=19.1

Q ss_pred             ccccc--cCcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCN--LCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~--~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      +|.|.  .|++.|...+.|..|+++|+|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            46777  777777777777777777764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=2e-06  Score=43.36  Aligned_cols=26  Identities=31%  Similarity=0.680  Sum_probs=13.6

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CEECCCCCceeCCHHHHHHHHHHhCC
Confidence            45555555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.14  E-value=8.6e-07  Score=45.17  Aligned_cols=21  Identities=24%  Similarity=0.548  Sum_probs=11.4

Q ss_pred             ceeccccchhccChhHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHK  154 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~  154 (193)
                      ||.|..|++.|...++|..|+
T Consensus         8 p~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCEETTTTEECSCHHHHHHHH
T ss_pred             CeECCCCCCccCCHhHccCcC
Confidence            455555555555555555554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.11  E-value=1.8e-06  Score=41.05  Aligned_cols=26  Identities=19%  Similarity=0.664  Sum_probs=15.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            45566666666666666666665554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.11  E-value=1.3e-06  Score=41.68  Aligned_cols=26  Identities=27%  Similarity=0.659  Sum_probs=15.5

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            45566666666666666666665554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=2.5e-06  Score=40.26  Aligned_cols=25  Identities=28%  Similarity=0.736  Sum_probs=13.0

Q ss_pred             ceeccccchhccChhHHHHHHHHhC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      ||.|..|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            4555555555555555555555444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=3.2e-06  Score=39.56  Aligned_cols=24  Identities=25%  Similarity=0.585  Sum_probs=12.5

Q ss_pred             ceeccccchhccChhHHHHHHHHh
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      ||.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            455555555555555555555544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.05  E-value=1.4e-07  Score=46.61  Aligned_cols=27  Identities=22%  Similarity=0.522  Sum_probs=18.3

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            566777777777667777776666664

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.04  E-value=2.4e-06  Score=43.50  Aligned_cols=26  Identities=31%  Similarity=0.609  Sum_probs=14.9

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|.+  |++.|...+.|..|+++|++
T Consensus         8 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            8 QHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            555653  66666666666666555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=2.1e-06  Score=40.75  Aligned_cols=26  Identities=38%  Similarity=0.802  Sum_probs=15.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            45566666666666666666665554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=2.4e-06  Score=40.12  Aligned_cols=24  Identities=25%  Similarity=0.526  Sum_probs=12.1

Q ss_pred             ceeccccchhccChhHHHHHHHHh
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      ||.|..|++.|...+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            445555555555555555555444

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=4.7e-06  Score=39.77  Aligned_cols=26  Identities=23%  Similarity=0.588  Sum_probs=13.8

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.2e-06  Score=40.67  Aligned_cols=26  Identities=38%  Similarity=0.678  Sum_probs=15.7

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45566666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.00  E-value=2.9e-06  Score=41.16  Aligned_cols=26  Identities=31%  Similarity=0.749  Sum_probs=15.9

Q ss_pred             ceecc--ccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCD--LCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|.  .|++.|...+.|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            45565  566666666666666666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.3e-07  Score=42.24  Aligned_cols=26  Identities=27%  Similarity=0.636  Sum_probs=16.5

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45666666666666666666666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.97  E-value=4.1e-06  Score=39.99  Aligned_cols=26  Identities=23%  Similarity=0.493  Sum_probs=16.9

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      +|.|..|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            45666666666666666666666655

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=4.8e-06  Score=40.65  Aligned_cols=26  Identities=42%  Similarity=0.744  Sum_probs=15.8

Q ss_pred             ceecc--ccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCD--LCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|.  .|++.|...+.|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            45565  566666666666666666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.93  E-value=4.5e-06  Score=45.02  Aligned_cols=32  Identities=16%  Similarity=0.312  Sum_probs=16.4

Q ss_pred             hhcCCCceecc--cccccccChhHHHHHHHhhCC
Q psy13164        101 ILHRGIRYKCD--LCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       101 ~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      +|.+.++|.|.  .|++.|.....|..|+++|++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            34444555553  455555555555555555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.16  E-value=1.3e-06  Score=40.59  Aligned_cols=24  Identities=29%  Similarity=0.765  Sum_probs=13.9

Q ss_pred             ceeccccchhccChhHHHHHHHHh
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      ||.|..|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455566666666656666665554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.10  E-value=1.8e-06  Score=41.45  Aligned_cols=26  Identities=35%  Similarity=0.787  Sum_probs=16.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|.....|..|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            46666666666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=8.1e-06  Score=38.64  Aligned_cols=25  Identities=36%  Similarity=0.752  Sum_probs=13.5

Q ss_pred             ceecc--ccchhccChhHHHHHHHHhC
Q psy13164        134 RYKCD--LCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~H~~~h~  158 (193)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34555  55555555555555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.82  E-value=5.7e-06  Score=39.60  Aligned_cols=26  Identities=38%  Similarity=0.953  Sum_probs=14.4

Q ss_pred             ceeccccchhccChhHHHHH-HHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDH-KKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  159 (193)
                      ||.|..|++.|...+.|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 345544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.24  E-value=0.00054  Score=39.44  Aligned_cols=44  Identities=18%  Similarity=0.137  Sum_probs=23.9

Q ss_pred             cchhccChhHHHHHHH-HhCCc-------ccccc--cCcccccChHHHHHHHHH
Q psy13164        140 CSKEYFHKGYLTDHKK-IHQGI-------RYKCN--LCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       140 C~~~f~~~~~l~~H~~-~h~~~-------~~~C~--~C~~~F~~~~~L~~H~~~  183 (193)
                      |++.|.+...|..|+. .|.+.       +|.|.  .|++.+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            5555555555555542 34321       35554  566666666666666655

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.11  E-value=0.00023  Score=37.52  Aligned_cols=24  Identities=25%  Similarity=0.390  Sum_probs=18.1

Q ss_pred             ccccccCcccccChHHHHHHHHHc
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      +|.|+.|+..|+....|+.||+.-
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhhc
Confidence            677888888888777888887743

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.84  E-value=0.0025  Score=36.55  Aligned_cols=49  Identities=16%  Similarity=0.173  Sum_probs=40.9

Q ss_pred             ecccccccccChhHHHHHHH-hhCCc-------ceecc--ccchhccChhHHHHHHHHh
Q psy13164        109 KCDLCSKEYFHKGSLTEHKK-RHQGI-------RYKCD--LCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       109 ~C~~C~~~f~~~~~l~~h~~-~h~~~-------~~~C~--~C~~~f~~~~~l~~H~~~h  157 (193)
                      ++..|++.|.+...|..|+. .|.+.       +|.|.  .|++.+.....|..|++..
T Consensus         5 ~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            5 KWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            34679999999999999984 67642       59997  6999999999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.69  E-value=0.00042  Score=45.17  Aligned_cols=26  Identities=23%  Similarity=0.414  Sum_probs=15.4

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHH
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKK  182 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~  182 (193)
                      |+|. ||.|..|++.|.+.+.|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4444 5666666666666666666654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.68  E-value=0.0031  Score=43.60  Aligned_cols=83  Identities=14%  Similarity=0.193  Sum_probs=57.9

Q ss_pred             CCceec--ccccccccChhHHHHHHHhhCCcceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHH
Q psy13164        105 GIRYKC--DLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHK  181 (193)
Q Consensus       105 ~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~  181 (193)
                      .....|  .-|+..+. ...+..|...-.-.+..|+.|+..+ ....|..|+...-.. +-.|+.|+..|.. ..|..|.
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~  156 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHD  156 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHH
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHH
Confidence            345677  45776554 4567778643333478999999887 567788998755554 6789999998855 5789999


Q ss_pred             HHcCCCCCC
Q psy13164        182 KIHQGIRFK  190 (193)
Q Consensus       182 ~~h~~~~~~  190 (193)
                      .+++|..++
T Consensus       157 ~~~~~~~~~  165 (170)
T 3hcs_A          157 QNCPLALEH  165 (170)
T ss_dssp             TTCCC----
T ss_pred             HhCcChhhh
Confidence            999998865

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.40  E-value=0.00061  Score=44.92  Aligned_cols=73  Identities=16%  Similarity=0.245  Sum_probs=47.7

Q ss_pred             CceecccccccccChhHHHHHH--HhhCCc--ceeccc------cchhccChhHHHHHHHHhCCc-ccccccCcccccCh
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHK--KRHQGI--RYKCDL------CSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRK  174 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~--~~h~~~--~~~C~~------C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~  174 (193)
                      .++.|..|+..|.+...+..|.  +.|...  .+.+..      -++.+....    +...+.+. .|.|..|++.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4588999999999999999998  456543  233311      012222111    11122333 68899999999999


Q ss_pred             HHHHHHHH
Q psy13164        175 DILIEHKK  182 (193)
Q Consensus       175 ~~L~~H~~  182 (193)
                      ..|..|..
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.57  E-value=0.0026  Score=41.43  Aligned_cols=27  Identities=19%  Similarity=0.359  Sum_probs=17.1

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHH
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      |+|. +|.|..|++.|.+.+.|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            4444 66676777777766666666653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.29  E-value=0.027  Score=29.65  Aligned_cols=24  Identities=21%  Similarity=0.301  Sum_probs=19.0

Q ss_pred             CceecccccccccChhHHHHHHHh
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKR  129 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~  129 (193)
                      ..|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            347888888888888888888873

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.21  E-value=0.0039  Score=41.00  Aligned_cols=22  Identities=18%  Similarity=0.288  Sum_probs=19.2

Q ss_pred             CCcccchhHhhccCchhhcccc
Q psy13164         56 NDAVTRDCLEFFKSHDSTLKNE   77 (193)
Q Consensus        56 ~~~~c~~c~~~f~~~~~~~~h~   77 (193)
                      ..+.|..|+..|.+...+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHH
Confidence            4578999999999999888887

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.16  E-value=0.48  Score=23.35  Aligned_cols=24  Identities=21%  Similarity=0.451  Sum_probs=18.2

Q ss_pred             ccccccCcccccChHHHHHHHHHc
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      .+.|..|+.+|....++..|.+.-
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCeeccccceehhhHHHhhhheec
Confidence            577888888888888888886543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.00  E-value=0.46  Score=23.23  Aligned_cols=23  Identities=26%  Similarity=0.494  Sum_probs=14.7

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      .|.|+.|-+.|.+...|..|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHh
Confidence            46666666666666666666543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=86.16  E-value=0.78  Score=22.40  Aligned_cols=23  Identities=22%  Similarity=0.388  Sum_probs=17.7

Q ss_pred             ceecccccccccChhHHHHHHHh
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKR  129 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~  129 (193)
                      .|.|+.|.+.|.+...|..|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHh
Confidence            37788888888888888887654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.33  E-value=0.36  Score=29.11  Aligned_cols=22  Identities=23%  Similarity=0.425  Sum_probs=11.5

Q ss_pred             eeccccchhccChhHHHHHHHHhCC
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ..|.+||+.|.   .|.+|+.+|+|
T Consensus        22 iiClecGK~fK---~LkRHL~~~hg   43 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHS   43 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTC
T ss_pred             eEecccchhhH---HHHHHHHHccC
Confidence            45555555554   24455555444

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=83.81  E-value=1.3  Score=30.18  Aligned_cols=53  Identities=15%  Similarity=0.208  Sum_probs=40.5

Q ss_pred             CceecccccccccChhHHHHHHHhhCC-cceeccccchhccChhHHHHHHHHhCCc
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRHQG-IRYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      .+..|+.|+..+ ....|..|....-. ++..|+.|+..+. ...|..|..++.|.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~  162 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLA  162 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC-
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcCh
Confidence            457899999877 55668889865444 3688999998775 46789999988886

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.17  E-value=0.89  Score=26.79  Aligned_cols=44  Identities=18%  Similarity=0.480  Sum_probs=27.9

Q ss_pred             eecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHH
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDH  153 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H  153 (193)
                      |.|..|+.++. +..+..|...-++- .|.|..|++.|.. ..++.|
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            77888886544 44577776655553 5778888887764 334444

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.14  E-value=0.6  Score=28.14  Aligned_cols=22  Identities=23%  Similarity=0.468  Sum_probs=16.2

Q ss_pred             eecccccccccChhHHHHHHHhhCC
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      ..|-+||+.|..   |.+|...|+|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hg   43 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHS   43 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTC
T ss_pred             eEecccchhhHH---HHHHHHHccC
Confidence            678888887764   6678777666

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=82.73  E-value=0.53  Score=24.65  Aligned_cols=12  Identities=33%  Similarity=0.960  Sum_probs=5.7

Q ss_pred             eecccccccccC
Q psy13164        108 YKCDLCSKEYFH  119 (193)
Q Consensus       108 ~~C~~C~~~f~~  119 (193)
                      |.|-.||..|+.
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            455555555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	193
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 5e-05
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG-IRYKCNLCSKEFLRKDILIEHKKIH 184
           Y C  C K + HK     H  +H G   Y C +C K+F  K  L+ H KIH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG-IRYKCDLCSKEYFHKGYLTDHKKIH 157
           Y C  C K + HK     H   H G   Y C +C K++  K +L  H KIH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 156 IHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
           IH G + Y C  C K F R  IL++H+++H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 9e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 155 KIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIRF 189
           + H G + Y C+ C K F +K +L  H K +    F
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           ++C +C + F R D L  H + H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
            +   +  R YKC+ C K F     L +H++ H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.002
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGI 187
             +   GI+ ++C  C + F R D L  H+K H  +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           + C +C++ F R++ L  H + H  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTN 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	193
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.4
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.38
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.34
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.27
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.18
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.15
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.08
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.07
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.06
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.02
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.92
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.92
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.91
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.88
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.8
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.75
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.67
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.53
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.49
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.39
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.37
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.37
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.35
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.35
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.34
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.1
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.05
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.91
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.89
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.84
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.83
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.72
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.66
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.61
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.56
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.41
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.33
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.32
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.31
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.28
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.27
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.24
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.24
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.05
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.01
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.99
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.96
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.92
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.82
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.76
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.71
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.71
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.66
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.49
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.47
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.37
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.32
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.3
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.28
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.18
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.87
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.59
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.4
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.36
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.23
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.09
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.01
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.94
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.92
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.92
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.71
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.56
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.18
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.98
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.64
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.15
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.06
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.74
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.24
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.58
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.24
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.83
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.23
d1fu9a_	36	U-shaped transcription factor, different fingers {	86.85
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.78
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.26
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.95
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.59
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	83.96

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5e-17  Score=90.58  Aligned_cols=50  Identities=40%  Similarity=0.826  Sum_probs=37.8

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc-ccccccCcccccChHHHHHHHHHc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      ||.| .||+.|.....|..|+++|+|+ ||.|.+|+++|...+.|..|+++|
T Consensus         3 ~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6777 4777777777777777777776 777777777777777777777765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.6e-16  Score=87.01  Aligned_cols=52  Identities=37%  Similarity=0.727  Sum_probs=49.4

Q ss_pred             CCceecccccccccChhHHHHHHHhhCCc-ceeccccchhccChhHHHHHHHHh
Q psy13164        105 GIRYKCDLCSKEYFHKGSLTEHKKRHQGI-RYKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       105 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      +++|.| .||+.|.....|..|+++|+++ ||.|..||+.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            478999 5999999999999999999998 999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9.3e-14  Score=70.84  Aligned_cols=35  Identities=37%  Similarity=0.509  Sum_probs=30.9

Q ss_pred             CcccccccCcccccChHHHHHHHH-HcCCCCCCCCC
Q psy13164        159 GIRYKCNLCSKEFLRKDILIEHKK-IHQGIRFKCDL  193 (193)
Q Consensus       159 ~~~~~C~~C~~~F~~~~~L~~H~~-~h~~~~~~~c~  193 (193)
                      ++||.|..||++|...++|..|++ +|+|+|||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            458999999999999999999975 79999999883

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.7e-14  Score=73.00  Aligned_cols=36  Identities=31%  Similarity=0.585  Sum_probs=32.3

Q ss_pred             HHHHHhCCc-ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        152 DHKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       152 ~H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      +|+++|+++ ||.|.+||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            477889987 999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.6e-13  Score=66.50  Aligned_cols=32  Identities=44%  Similarity=0.913  Sum_probs=28.3

Q ss_pred             HhCCc-ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        156 IHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       156 ~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      +|+|+ ||.|..|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            47887 999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1e-12  Score=66.09  Aligned_cols=35  Identities=34%  Similarity=0.599  Sum_probs=29.9

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHHHHHcCCCCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQGIRF  189 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~~~  189 (193)
                      |+|+|+ ||.|.+|+++|...+.|..|+++|+++.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~f   36 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF   36 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCCC
Confidence            478887 99999999999999999999999987753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.27  E-value=1.2e-12  Score=62.21  Aligned_cols=28  Identities=25%  Similarity=0.704  Sum_probs=25.6

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|.+|+++|..++.|.+|+++|+|||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            7899999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.5e-12  Score=61.04  Aligned_cols=28  Identities=39%  Similarity=0.802  Sum_probs=25.4

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|.+|+++|.+++.|.+|+++|+|+|
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            7899999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=2.5e-12  Score=65.02  Aligned_cols=34  Identities=32%  Similarity=0.573  Sum_probs=28.7

Q ss_pred             HHHHhCCc-ccccccCcccccChHHHHHHHHHcCC
Q psy13164        153 HKKIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       153 H~~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      |.|+|+|+ ||.|.+|+++|..++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56788887 88888888888888888888888865

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.7e-12  Score=63.28  Aligned_cols=32  Identities=34%  Similarity=0.453  Sum_probs=28.2

Q ss_pred             ccccc--CcccccChHHHHHHHHHcCCCCCCCCC
Q psy13164        162 YKCNL--CSKEFLRKDILIEHKKIHQGIRFKCDL  193 (193)
Q Consensus       162 ~~C~~--C~~~F~~~~~L~~H~~~h~~~~~~~c~  193 (193)
                      |.|+.  |+++|..++.|.+|+++|+|+|||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67775  999999999999999999999999883

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.1e-11  Score=61.36  Aligned_cols=31  Identities=26%  Similarity=0.544  Sum_probs=26.4

Q ss_pred             hCCc-ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        157 HQGI-RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       157 h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      |+|+ ||+|.+|++.|.++++|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            6776 899999999999999999999888865

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=7.5e-12  Score=58.72  Aligned_cols=27  Identities=33%  Similarity=0.815  Sum_probs=20.7

Q ss_pred             cccccccCcccccChHHHHHHHHHcCC
Q psy13164        160 IRYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       160 ~~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      +||+|.+|+++|..++.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            377777777777777777777777776

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.9e-11  Score=62.13  Aligned_cols=35  Identities=34%  Similarity=0.701  Sum_probs=18.3

Q ss_pred             hhhhhcCCCceecccccccccChhHHHHHHHhhCC
Q psy13164         98 LNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus        98 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      |+++|.+++||.|+.|++.|...++|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            44445555555555555555555555555555544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.5e-11  Score=58.71  Aligned_cols=30  Identities=33%  Similarity=0.781  Sum_probs=17.8

Q ss_pred             hCCc-ceeccccchhccChhHHHHHHHHhCC
Q psy13164        130 HQGI-RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       130 h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      |+++ ||.|..||+.|...+.|..|+++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4554 56666666666666666666666655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.9e-11  Score=60.90  Aligned_cols=33  Identities=30%  Similarity=0.589  Sum_probs=21.6

Q ss_pred             cceeccccchhccChhHHHHHHH-HhCCc-ccccc
Q psy13164        133 IRYKCDLCSKEYFHKGYLTDHKK-IHQGI-RYKCN  165 (193)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~  165 (193)
                      +||.|..||+.|...++|..|++ +|+|+ ||.|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            36666666666666666666654 56665 66664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.06  E-value=3.4e-12  Score=67.90  Aligned_cols=40  Identities=25%  Similarity=0.423  Sum_probs=32.9

Q ss_pred             hHHHHHHHHhCCc-cccccc--CcccccChHHHHHHHHHcCCCC
Q psy13164        148 GYLTDHKKIHQGI-RYKCNL--CSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       148 ~~l~~H~~~h~~~-~~~C~~--C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ..|..|+. |+|+ ||.|..  |+++|..+++|..|+++|+|+|
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34556664 8887 999976  9999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=4.2e-11  Score=54.71  Aligned_cols=25  Identities=44%  Similarity=0.842  Sum_probs=19.5

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||+|.+||++|..++.|..|+++|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            6778888888888888888887774

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5e-11  Score=59.61  Aligned_cols=32  Identities=22%  Similarity=0.528  Sum_probs=24.6

Q ss_pred             HHhCCc-ccccccCcccccChHHHHHHHHHcCC
Q psy13164        155 KIHQGI-RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       155 ~~h~~~-~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ++|+|+ ||.|+.|+++|..+++|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            467887 88888888888888888888765443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.7e-10  Score=57.69  Aligned_cols=32  Identities=28%  Similarity=0.417  Sum_probs=15.7

Q ss_pred             hhcCCCceecccccccccChhHHHHHHHhhCC
Q psy13164        101 ILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       101 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      +|.+++||.|.+|++.|.....|..|+++|.+
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            34444455555555555555555555544443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.6e-10  Score=55.00  Aligned_cols=27  Identities=33%  Similarity=0.628  Sum_probs=22.5

Q ss_pred             cccccc--CcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||.|..  |+++|..++.|.+|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            688877  888888888888888888876

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.2e-10  Score=55.06  Aligned_cols=28  Identities=39%  Similarity=0.823  Sum_probs=24.5

Q ss_pred             ccccc--cCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCN--LCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~--~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      ||.|+  .|+++|...++|.+|+++|+|+|
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            78885  59999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.8e-10  Score=54.92  Aligned_cols=27  Identities=33%  Similarity=0.647  Sum_probs=21.3

Q ss_pred             cccccc--CcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||.|+.  |+++|...+.|.+|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            677866  888888888888888888775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=2.8e-10  Score=57.31  Aligned_cols=34  Identities=21%  Similarity=0.396  Sum_probs=18.8

Q ss_pred             hhhhhcCCCceecccccccccChhHHHHHHHhhC
Q psy13164         98 LNKILHRGIRYKCDLCSKEYFHKGSLTEHKKRHQ  131 (193)
Q Consensus        98 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  131 (193)
                      |.++|.+++||.|..|++.|.+..+|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3445555555555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=2.9e-10  Score=53.15  Aligned_cols=26  Identities=27%  Similarity=0.761  Sum_probs=15.0

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..|++.|..+++|..|+++|+|
T Consensus         3 Py~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           3 PFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCcCEecccccccccCCCccC
Confidence            55555555555555555555555554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.91  E-value=2.8e-10  Score=53.83  Aligned_cols=27  Identities=19%  Similarity=0.607  Sum_probs=19.1

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|++|++.|...+.|.+|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            567777777777777777777777664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=5.3e-10  Score=55.19  Aligned_cols=25  Identities=24%  Similarity=0.612  Sum_probs=12.8

Q ss_pred             ceeccccchhccChhHHHHHHHHhC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      ||.|.+|++.|...++|.+|+++|+
T Consensus         7 Py~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           7 PFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             cccCCCCCCcccChHHHHHHccccC
Confidence            4555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5e-10  Score=52.86  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=19.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|++|++.|..++.|..|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            567777777777777777777777764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=7.9e-10  Score=50.37  Aligned_cols=24  Identities=38%  Similarity=0.783  Sum_probs=13.9

Q ss_pred             ceeccccchhccChhHHHHHHHHh
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h  157 (193)
                      ||.|.+|||+|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            455555555555555555555555

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1e-09  Score=54.53  Aligned_cols=31  Identities=32%  Similarity=0.765  Sum_probs=23.2

Q ss_pred             eeccc--cchhccChhHHHHHHHHhCCc-ccccc
Q psy13164        135 YKCDL--CSKEYFHKGYLTDHKKIHQGI-RYKCN  165 (193)
Q Consensus       135 ~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~  165 (193)
                      |.|+.  |++.|.....|.+|+++|+|+ ||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  777777777777777777776 77775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.8e-09  Score=53.06  Aligned_cols=28  Identities=18%  Similarity=0.469  Sum_probs=13.9

Q ss_pred             hhcCCCceecccccccccChhHHHHHHH
Q psy13164        101 ILHRGIRYKCDLCSKEYFHKGSLTEHKK  128 (193)
Q Consensus       101 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~  128 (193)
                      +|.+++||.|+.|++.|.+..+|..|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            3444455555555555555555555543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.7e-09  Score=50.11  Aligned_cols=27  Identities=33%  Similarity=0.598  Sum_probs=19.8

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|.+  |++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            677766  777777777777777777763

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=2.2e-09  Score=50.45  Aligned_cols=26  Identities=38%  Similarity=0.853  Sum_probs=19.5

Q ss_pred             cccccc--CcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ||.|..  |+++|...+.|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            677766  77777777777777777775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.1e-09  Score=50.06  Aligned_cols=27  Identities=30%  Similarity=0.650  Sum_probs=19.4

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|.+  |++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            677766  777777777777777777763

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=8.2e-10  Score=58.48  Aligned_cols=31  Identities=16%  Similarity=0.357  Sum_probs=17.5

Q ss_pred             hCCc-ceeccc--cchhccChhHHHHHHHHhCCc
Q psy13164        130 HQGI-RYKCDL--CSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       130 h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      |.++ ||.|.+  |++.|...++|..|+++|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            4444 566654  666666666666666666553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=2.2e-08  Score=48.12  Aligned_cols=27  Identities=48%  Similarity=0.860  Sum_probs=19.7

Q ss_pred             cccccc--CcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||.|..  |+++|...++|.+|+++|+.+
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            677766  777777777777777777653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.2e-08  Score=47.33  Aligned_cols=25  Identities=32%  Similarity=0.644  Sum_probs=17.4

Q ss_pred             cccccc--CcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|+.  |+++|...++|.+|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            566665  7777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.5e-08  Score=47.66  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=19.3

Q ss_pred             ceecc--ccchhccChhHHHHHHHHhCCc
Q psy13164        134 RYKCD--LCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ||.|+  .|++.|...++|..|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            56774  4777777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4e-08  Score=42.48  Aligned_cols=26  Identities=46%  Similarity=0.800  Sum_probs=16.3

Q ss_pred             ccccccCcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      |++|..|++.|+.+..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=2e-08  Score=47.12  Aligned_cols=26  Identities=35%  Similarity=0.824  Sum_probs=18.3

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|.+  |++.|...++|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            567765  77777777777777777765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=5.6e-08  Score=42.02  Aligned_cols=26  Identities=35%  Similarity=0.708  Sum_probs=15.4

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      |..|..|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666666554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=9.8e-08  Score=42.08  Aligned_cols=26  Identities=31%  Similarity=0.616  Sum_probs=21.2

Q ss_pred             cccccCcccccChHHHHHHHHHcCCC
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      +.|..||++|.-++.|.+|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46888888888888888888888875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.8e-07  Score=41.67  Aligned_cols=28  Identities=25%  Similarity=0.618  Sum_probs=24.3

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      +|.|+.|+.....++-|..|+|.|+++|
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3788999999999999999999999876

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.35  E-value=1.3e-07  Score=45.27  Aligned_cols=26  Identities=42%  Similarity=0.776  Sum_probs=17.4

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|.+  |++.|....+|.+|+++|+.
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            666665  67777777777777666654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.2e-07  Score=44.02  Aligned_cols=31  Identities=29%  Similarity=0.424  Sum_probs=26.9

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIRFKC  191 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~  191 (193)
                      ...|..||+.|...-.|.+|...|+|++||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4578899999999999999999999999883

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=6.8e-08  Score=44.72  Aligned_cols=25  Identities=28%  Similarity=0.640  Sum_probs=17.5

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~  158 (193)
                      ||.|.+  |++.|....+|.+|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            566766  7777777777777777764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=1.2e-06  Score=39.03  Aligned_cols=25  Identities=36%  Similarity=0.833  Sum_probs=17.6

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||.|.+||+.|..+....+|.++|.
T Consensus         3 Pf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           3 PFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             Ccccchhhhhhhcchhhhhhhhhcc
Confidence            6777777777777777777777664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.05  E-value=1.6e-06  Score=37.00  Aligned_cols=24  Identities=42%  Similarity=1.068  Sum_probs=22.2

Q ss_pred             cccccCcccccChHHHHHHHHHcC
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-06  Score=38.31  Aligned_cols=27  Identities=26%  Similarity=0.511  Sum_probs=21.4

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||+|..|...-..++.|..|+|.|+|.
T Consensus         3 pfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             cceeeecccccCCchheEEeeecccCc
Confidence            778888888888888888888888773

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=2.7e-06  Score=36.81  Aligned_cols=26  Identities=38%  Similarity=0.727  Sum_probs=20.9

Q ss_pred             ccccCcccccChHHHHHHHHHcCCCC
Q psy13164        163 KCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       163 ~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      +|+.|.+.|.++-.|..|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57888888888888888888888875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.6e-06  Score=38.01  Aligned_cols=26  Identities=38%  Similarity=0.791  Sum_probs=18.0

Q ss_pred             ccccccCcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ||.|++|+..|..+..+.-|.+.|.|
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CcccchHHHHhhccccceEeeecccC
Confidence            66777777777777767667776665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.6e-06  Score=37.42  Aligned_cols=25  Identities=28%  Similarity=0.647  Sum_probs=16.9

Q ss_pred             eeccccchhccChhHHHHHHHHhCC
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ..|..||++|.-++.|++|+..|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3566677777777777777666665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=6.4e-06  Score=36.62  Aligned_cols=25  Identities=24%  Similarity=0.687  Sum_probs=13.2

Q ss_pred             CceecccccccccChhHHHHHHHhh
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      +||.|..||+.|.......+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            3455555555555555555555544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.1e-06  Score=37.50  Aligned_cols=27  Identities=26%  Similarity=0.680  Sum_probs=18.4

Q ss_pred             CceecccccccccChhHHHHHHHhhCC
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      +||.|++|+..|.++..+..|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            566677777777777777777766655

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=6e-06  Score=37.27  Aligned_cols=26  Identities=35%  Similarity=0.708  Sum_probs=19.7

Q ss_pred             cccccc--CcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~~  186 (193)
                      ||.|..  |++++..+++|+.|++.++|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            677766  77888888888888877654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.83  E-value=5.3e-06  Score=40.34  Aligned_cols=28  Identities=32%  Similarity=0.701  Sum_probs=24.4

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGIR  188 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~~  188 (193)
                      .|.|..|++.|.+..+|-.|++.|..+|
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcchH
Confidence            5889999999999999999999988766

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=7e-06  Score=37.93  Aligned_cols=26  Identities=31%  Similarity=0.538  Sum_probs=14.6

Q ss_pred             eeccccchhccChhHHHHHHHHhCCc
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ..|..||++|.....|.+|...|+|+
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~e   31 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGE   31 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCC
Confidence            44555555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.8e-05  Score=34.54  Aligned_cols=25  Identities=32%  Similarity=0.603  Sum_probs=18.5

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      ||+|..|+.+-..+++|..|+|+|.
T Consensus         3 p~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CcccccccchhcchhhHhhhhhccc
Confidence            6777777777777777777777774

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.66  E-value=1.4e-05  Score=35.32  Aligned_cols=24  Identities=38%  Similarity=0.755  Sum_probs=19.3

Q ss_pred             cccccc--CcccccChHHHHHHHHHc
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h  184 (193)
                      ||.|+.  |++.|..++.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            677764  888888888888888877

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.2e-05  Score=34.81  Aligned_cols=26  Identities=23%  Similarity=0.537  Sum_probs=20.6

Q ss_pred             eeccccchhccChhHHHHHHHHhCCc
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      |.|++||.....++.|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67888888888888888888888764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=2.9e-05  Score=34.17  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=14.0

Q ss_pred             ceeccccchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||+|..|.....+++.|..|++.|+|
T Consensus         3 pfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             cceeeecccccCCchheEEeeecccC
Confidence            45555555555555555555555554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.41  E-value=5.9e-05  Score=33.32  Aligned_cols=27  Identities=30%  Similarity=0.575  Sum_probs=21.9

Q ss_pred             ccccccCcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      .|.|..|...|..+..|+.|+-.|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            477888888888888888888888875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=7.2e-05  Score=33.08  Aligned_cols=23  Identities=35%  Similarity=0.647  Sum_probs=16.2

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      ||.|..|+.+|.++.+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=9.8e-05  Score=32.80  Aligned_cols=23  Identities=26%  Similarity=0.463  Sum_probs=15.2

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      ||+|..|......+++|..|.++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            56666666666666666666665

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.00012  Score=31.93  Aligned_cols=24  Identities=33%  Similarity=0.628  Sum_probs=12.2

Q ss_pred             ceecccccccccChhHHHHHHHhh
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      ||+|..|...-...++|..|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            445555555555555555555544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.31  E-value=0.00016  Score=31.87  Aligned_cols=27  Identities=22%  Similarity=0.570  Sum_probs=21.7

Q ss_pred             CceecccccccccChhHHHHHHHhhCC
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      ..|.|..|..+|.+...|..||..|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            347888888888888888888888876

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=9.3e-05  Score=31.86  Aligned_cols=25  Identities=36%  Similarity=0.784  Sum_probs=15.3

Q ss_pred             eccccchhccChhHHHHHHHHhCCc
Q psy13164        136 KCDLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       136 ~C~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      +|+.|.+.|.++..|..|.+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666666666666666666666653

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=5.9e-05  Score=33.44  Aligned_cols=27  Identities=30%  Similarity=0.567  Sum_probs=17.0

Q ss_pred             cccccc--CcccccChHHHHHHHHHcCCC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      ||.|..  |.+.|.+.-.|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455544  666666666666666666664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00012  Score=32.96  Aligned_cols=25  Identities=36%  Similarity=0.695  Sum_probs=15.5

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~  158 (193)
                      ||.|..  |++.+...++|+.|+++++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            556654  6666666666666666544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.24  E-value=0.00011  Score=32.42  Aligned_cols=24  Identities=33%  Similarity=0.754  Sum_probs=14.5

Q ss_pred             ceeccc--cchhccChhHHHHHHHHh
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIH  157 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h  157 (193)
                      ||.|+.  |++.|...+-|++|..+|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            455654  666666666666666554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00019  Score=31.67  Aligned_cols=21  Identities=43%  Similarity=0.902  Sum_probs=11.7

Q ss_pred             eecccccccccChhHHHHHHH
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKK  128 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~  128 (193)
                      |.|..|+..|..+.+|..||.
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            555555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.0001  Score=33.45  Aligned_cols=25  Identities=32%  Similarity=0.646  Sum_probs=14.6

Q ss_pred             cccccc--CcccccChHHHHHHH-HHcC
Q psy13164        161 RYKCNL--CSKEFLRKDILIEHK-KIHQ  185 (193)
Q Consensus       161 ~~~C~~--C~~~F~~~~~L~~H~-~~h~  185 (193)
                      ||.|..  |+++|++.+.-..|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455554  666666666666665 5554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.99  E-value=0.0002  Score=32.42  Aligned_cols=26  Identities=50%  Similarity=1.155  Sum_probs=15.7

Q ss_pred             ccccccCcccccChHHHHHHHH-HcCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKK-IHQG  186 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~-~h~~  186 (193)
                      ||.|.+|++.|..+..|-+|+. +|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            4666666666666666666643 3443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00027  Score=30.83  Aligned_cols=26  Identities=35%  Similarity=0.454  Sum_probs=21.9

Q ss_pred             ccccccCcccccChHHHHHHHHHcCC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      |-+|+.|..+..++..|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            45788999999999999999998853

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.92  E-value=0.00029  Score=29.75  Aligned_cols=23  Identities=39%  Similarity=1.037  Sum_probs=14.6

Q ss_pred             eecccccccccChhHHHHHHHhh
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      |+|..|...|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00038  Score=29.40  Aligned_cols=22  Identities=41%  Similarity=0.807  Sum_probs=18.9

Q ss_pred             ccccccCcccccChHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKK  182 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~  182 (193)
                      ||+|..|...|.++..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6889999999999988888874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.76  E-value=0.00067  Score=32.73  Aligned_cols=25  Identities=28%  Similarity=0.709  Sum_probs=13.4

Q ss_pred             eecccccccccChhHHHHHHHhhCC
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      |.|..|++.|.+...|--||+.|..
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             cCCCCCCCccCCcccccchHhhhcc
Confidence            5555555555555555555555543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00063  Score=33.07  Aligned_cols=21  Identities=38%  Similarity=0.963  Sum_probs=11.8

Q ss_pred             ccccccCcccccChHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHK  181 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~  181 (193)
                      ||.|..|++.|..+.++.+|.
T Consensus         5 PYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           5 PYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CEECSSSCCEESCHHHHHHHH
T ss_pred             ceeccchhhhhhhHHHHHHhh
Confidence            555555555555555555554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.71  E-value=0.00046  Score=30.47  Aligned_cols=26  Identities=31%  Similarity=0.591  Sum_probs=15.7

Q ss_pred             ceeccc--cchhccChhHHHHHHHHhCC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  159 (193)
                      ||.|..  |.|.|.+...|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  66666666666666666655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.66  E-value=0.00049  Score=31.13  Aligned_cols=22  Identities=27%  Similarity=0.810  Sum_probs=15.0

Q ss_pred             ceeccccchhccChhHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      ||.|.+|++.|+....|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            5667777777777766666664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00051  Score=31.09  Aligned_cols=25  Identities=28%  Similarity=0.668  Sum_probs=15.0

Q ss_pred             ceeccc--cchhccChhHHHHHH-HHhC
Q psy13164        134 RYKCDL--CSKEYFHKGYLTDHK-KIHQ  158 (193)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~H~-~~h~  158 (193)
                      ||.|..  |.|+|++.+.-..|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            556655  666666666666665 5554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0011  Score=29.37  Aligned_cols=25  Identities=24%  Similarity=0.507  Sum_probs=17.5

Q ss_pred             ceeccccchhccChhHHHHHHHHhC
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKIHQ  158 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~h~  158 (193)
                      ||.|..|......+++|..|+.+-+
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            6777777777777777777776533

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0014  Score=30.33  Aligned_cols=25  Identities=28%  Similarity=0.723  Sum_probs=18.5

Q ss_pred             cccccCcccccChHHHHHHHHHcCC
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKIHQG  186 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~h~~  186 (193)
                      |.|..|++.|..+..+.+|.-..+|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            6777888888877777777666554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.32  E-value=0.0016  Score=27.39  Aligned_cols=22  Identities=36%  Similarity=0.819  Sum_probs=14.5

Q ss_pred             ceecccccccccChhHHHHHHH
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKK  128 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~  128 (193)
                      ||+|+-|...|.++..|+.||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4666666666666666666654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0016  Score=31.57  Aligned_cols=22  Identities=23%  Similarity=0.809  Sum_probs=18.9

Q ss_pred             ceeccccchhccChhHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      ||.|..|+|.|....++.+|..
T Consensus         5 PYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           5 PYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             ceeccchhhhhhhHHHHHHhhh
Confidence            8999999999999888888854

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0013  Score=29.03  Aligned_cols=23  Identities=35%  Similarity=0.569  Sum_probs=13.7

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      ||+|..|..--.++++|..|++.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            45666666555666666666554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0018  Score=27.98  Aligned_cols=23  Identities=35%  Similarity=0.807  Sum_probs=18.4

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      ||+|..||+.+..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68888888888888888888643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0013  Score=30.81  Aligned_cols=19  Identities=26%  Similarity=0.487  Sum_probs=11.1

Q ss_pred             ccccChHHHHHHHHHcCCC
Q psy13164        169 KEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       169 ~~F~~~~~L~~H~~~h~~~  187 (193)
                      +.|...-.|..|+|+||||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3455556666666666654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0026  Score=31.99  Aligned_cols=25  Identities=32%  Similarity=0.588  Sum_probs=20.6

Q ss_pred             ccccccCcccccChHHHHHHHHHcC
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      -|.|..|++.|+....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5788888888888888888887764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.66  E-value=0.0037  Score=26.92  Aligned_cols=22  Identities=36%  Similarity=0.830  Sum_probs=16.3

Q ss_pred             ceeccccchhccChhHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      ||.|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5777888888777777777754

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0038  Score=27.49  Aligned_cols=22  Identities=32%  Similarity=0.643  Sum_probs=11.9

Q ss_pred             ceeccccchhccChhHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      ||+|..|.....+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4555555555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.40  E-value=0.0067  Score=25.55  Aligned_cols=22  Identities=55%  Similarity=0.976  Sum_probs=15.7

Q ss_pred             cccccCcccccChHHHHHHHHH
Q psy13164        162 YKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      |.|+.|-+.|+.+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777665

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.003  Score=29.49  Aligned_cols=20  Identities=20%  Similarity=0.240  Sum_probs=14.0

Q ss_pred             chhccChhHHHHHHHHhCCc
Q psy13164        141 SKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       141 ~~~f~~~~~l~~H~~~h~~~  160 (193)
                      ++.|.....|..|+|+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            35677777777777777763

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.0086  Score=25.92  Aligned_cols=23  Identities=35%  Similarity=0.543  Sum_probs=13.5

Q ss_pred             eecccccccccChhHHHHHHHhh
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRH  130 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h  130 (193)
                      -+|+.|....+++..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45666666666666666665555

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.0085  Score=27.59  Aligned_cols=25  Identities=20%  Similarity=0.594  Sum_probs=17.4

Q ss_pred             eeccccchhccChhHHHHHHHHhCC
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKIHQG  159 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~h~~  159 (193)
                      |.|..|||.|...+.+.+|-..-+|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            6777777777777777777655444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.011  Score=28.11  Aligned_cols=27  Identities=22%  Similarity=0.646  Sum_probs=19.1

Q ss_pred             CCceeccc--ccccccChhHHHHHHHhhC
Q psy13164        105 GIRYKCDL--CSKEYFHKGSLTEHKKRHQ  131 (193)
Q Consensus       105 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~  131 (193)
                      .+||.|..  |+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            56777743  7777777777777776654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0079  Score=28.67  Aligned_cols=26  Identities=31%  Similarity=0.595  Sum_probs=19.4

Q ss_pred             ccccc--ccCcccccChHHHHHHHHHcC
Q psy13164        160 IRYKC--NLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       160 ~~~~C--~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      +||.|  +.|+.+|.+-..|..|...|.
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHhhhhhe
Confidence            37888  448888888888888877663

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.0089  Score=25.79  Aligned_cols=23  Identities=26%  Similarity=0.491  Sum_probs=18.0

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      .|+|+.|+.....++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36788888888888888888775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0079  Score=30.16  Aligned_cols=25  Identities=28%  Similarity=0.624  Sum_probs=19.8

Q ss_pred             eecccccccccChhHHHHHHHhhCC
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      |.|..|++.|.....|+.|...|..
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeccccccccCCHHHHhHhHHhcCc
Confidence            7788888888888888888777754

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.012  Score=25.31  Aligned_cols=22  Identities=23%  Similarity=0.421  Sum_probs=13.3

Q ss_pred             eeccccchhccChhHHHHHHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      |+|+.|+.....++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5566666666666666666553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.71  E-value=0.0082  Score=25.71  Aligned_cols=19  Identities=32%  Similarity=0.562  Sum_probs=14.0

Q ss_pred             CcccccChHHHHHHHHHcC
Q psy13164        167 CSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       167 C~~~F~~~~~L~~H~~~h~  185 (193)
                      |+++|.....|..|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            7777777777777777664

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.56  E-value=0.011  Score=26.39  Aligned_cols=21  Identities=24%  Similarity=0.378  Sum_probs=11.5

Q ss_pred             CcccccChHHHHHHHHHcCCC
Q psy13164        167 CSKEFLRKDILIEHKKIHQGI  187 (193)
Q Consensus       167 C~~~F~~~~~L~~H~~~h~~~  187 (193)
                      |+..|...-.|..|+-.|+||
T Consensus        11 C~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHCC
T ss_pred             cchhhccchhhhHHhhhhcCC
Confidence            555555555555555555553

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.18  E-value=0.018  Score=26.16  Aligned_cols=22  Identities=27%  Similarity=0.558  Sum_probs=14.7

Q ss_pred             ccccccCcccccChHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKK  182 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~  182 (193)
                      +|.|.-||-.|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4667777777777777766643

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.017  Score=25.08  Aligned_cols=20  Identities=25%  Similarity=0.423  Sum_probs=16.2

Q ss_pred             cCcccccChHHHHHHHHHcC
Q psy13164        166 LCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       166 ~C~~~F~~~~~L~~H~~~h~  185 (193)
                      .|++.|+..+.++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48888888888888887773

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.64  E-value=0.033  Score=23.35  Aligned_cols=21  Identities=43%  Similarity=0.888  Sum_probs=12.6

Q ss_pred             eecccccccccChhHHHHHHH
Q psy13164        108 YKCDLCSKEYFHKGSLTEHKK  128 (193)
Q Consensus       108 ~~C~~C~~~f~~~~~l~~h~~  128 (193)
                      |.|+.|-+.|.++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            456666666666666665554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.15  E-value=0.074  Score=26.41  Aligned_cols=23  Identities=17%  Similarity=0.362  Sum_probs=11.1

Q ss_pred             ccccccCcccccChHHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~  183 (193)
                      |-.|+.|+....++.+|++|+..
T Consensus        24 patcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHH
Confidence            44455555555555555555443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.06  E-value=0.03  Score=25.41  Aligned_cols=22  Identities=23%  Similarity=0.517  Sum_probs=17.2

Q ss_pred             ceeccccchhccChhHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4788888888888888887753

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.74  E-value=0.056  Score=23.99  Aligned_cols=26  Identities=31%  Similarity=0.512  Sum_probs=17.6

Q ss_pred             eec--cccchhccChhHHHHHHHHhCCc
Q psy13164        135 YKC--DLCSKEYFHKGYLTDHKKIHQGI  160 (193)
Q Consensus       135 ~~C--~~C~~~f~~~~~l~~H~~~h~~~  160 (193)
                      |.|  +.|+..|...+.|..|+-.|+|+
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455  34777777777777777777763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.033  Score=30.61  Aligned_cols=22  Identities=23%  Similarity=0.489  Sum_probs=16.0

Q ss_pred             ccccccCcccccChHHHHHHHH
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKK  182 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~  182 (193)
                      .|-|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            4677777777777777777765

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.58  E-value=0.17  Score=23.13  Aligned_cols=21  Identities=24%  Similarity=0.676  Sum_probs=11.6

Q ss_pred             cccccCcccccChHHHHHHHH
Q psy13164        162 YKCNLCSKEFLRKDILIEHKK  182 (193)
Q Consensus       162 ~~C~~C~~~F~~~~~L~~H~~  182 (193)
                      |.|..|.+.++.-+++.+|.-
T Consensus         9 yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHHH
Confidence            555555555555555555543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.24  E-value=0.14  Score=23.46  Aligned_cols=23  Identities=30%  Similarity=0.723  Sum_probs=18.5

Q ss_pred             ceeccccchhccChhHHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      -|.|..|.+.+...+++-+|..+
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHHh
Confidence            47888888888888888888654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.83  E-value=0.053  Score=29.23  Aligned_cols=35  Identities=17%  Similarity=0.482  Sum_probs=17.5

Q ss_pred             CceecccccccccChhHHHHHHHhhCCcceeccccch
Q psy13164        106 IRYKCDLCSKEYFHKGSLTEHKKRHQGIRYKCDLCSK  142 (193)
Q Consensus       106 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~C~~C~~  142 (193)
                      ..|.|+.|++.|.....++.  .......|.|..|+.
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCC
T ss_pred             CceECCCCCCCcchhhHHHh--cCcCCCeEEecCCCC
Confidence            34677777766655443332  111112566666653

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.23  E-value=0.059  Score=29.56  Aligned_cols=23  Identities=17%  Similarity=0.421  Sum_probs=19.8

Q ss_pred             ceeccccchhccChhHHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKKI  156 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~~  156 (193)
                      .|-|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            48899999999999999999763

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.85  E-value=0.35  Score=22.34  Aligned_cols=23  Identities=22%  Similarity=0.427  Sum_probs=17.9

Q ss_pred             ccccCcccccChHHHHHHHHHcC
Q psy13164        163 KCNLCSKEFLRKDILIEHKKIHQ  185 (193)
Q Consensus       163 ~C~~C~~~F~~~~~L~~H~~~h~  185 (193)
                      -|..|+-+|...+.+..|.+..-
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~YC   32 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTS
T ss_pred             HHhhCCceehhHHHHHHHHHhcc
Confidence            48888889988888888866533

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.78  E-value=0.24  Score=26.39  Aligned_cols=24  Identities=29%  Similarity=0.672  Sum_probs=15.3

Q ss_pred             ccccccCcccccChHHHHHHHHHc
Q psy13164        161 RYKCNLCSKEFLRKDILIEHKKIH  184 (193)
Q Consensus       161 ~~~C~~C~~~F~~~~~L~~H~~~h  184 (193)
                      -|+|..|...|.+...|..|+..|
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhc
Confidence            366666666666666666666554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.26  E-value=0.38  Score=23.75  Aligned_cols=22  Identities=18%  Similarity=0.327  Sum_probs=10.5

Q ss_pred             ceeccccchhccChhHHHHHHH
Q psy13164        134 RYKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      |..|+.|+....++.+|.+|+.
T Consensus        24 patcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHH
Confidence            4444444444444444444443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.95  E-value=0.32  Score=21.00  Aligned_cols=19  Identities=32%  Similarity=0.492  Sum_probs=14.7

Q ss_pred             ccCcccccChHHHHHHHHH
Q psy13164        165 NLCSKEFLRKDILIEHKKI  183 (193)
Q Consensus       165 ~~C~~~F~~~~~L~~H~~~  183 (193)
                      +.|++.|+++..|..|.+.
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            3488889888888887664

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=0.36  Score=25.68  Aligned_cols=26  Identities=27%  Similarity=0.583  Sum_probs=22.9

Q ss_pred             ceecccccccccChhHHHHHHHhhCC
Q psy13164        107 RYKCDLCSKEYFHKGSLTEHKKRHQG  132 (193)
Q Consensus       107 ~~~C~~C~~~f~~~~~l~~h~~~h~~  132 (193)
                      -|+|..|...|.....|..|...|-.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhccH
Confidence            49999999999999999999888754

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.96  E-value=0.77  Score=19.80  Aligned_cols=21  Identities=19%  Similarity=0.414  Sum_probs=12.1

Q ss_pred             eeccccchhccChhHHHHHHH
Q psy13164        135 YKCDLCSKEYFHKGYLTDHKK  155 (193)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~H~~  155 (193)
                      |.|..||+...+...++-|..
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            456666666665555555543