Psyllid ID: psy13207
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | 2.2.26 [Sep-21-2011] | |||||||
| Q5RAN6 | 360 | Nucleoporin SEH1 OS=Pongo | yes | N/A | 0.847 | 0.463 | 0.471 | 3e-44 | |
| Q96EE3 | 360 | Nucleoporin SEH1 OS=Homo | yes | N/A | 0.847 | 0.463 | 0.471 | 3e-44 | |
| A7YY75 | 360 | Nucleoporin SEH1 OS=Bos t | yes | N/A | 0.847 | 0.463 | 0.466 | 7e-44 | |
| Q8R2U0 | 360 | Nucleoporin SEH1 OS=Mus m | yes | N/A | 0.857 | 0.469 | 0.461 | 2e-43 | |
| Q4FZW5 | 360 | Nucleoporin seh1-A OS=Xen | N/A | N/A | 0.857 | 0.469 | 0.461 | 2e-42 | |
| Q5U4Y8 | 360 | Nucleoporin seh1 OS=Xenop | yes | N/A | 0.857 | 0.469 | 0.461 | 2e-42 | |
| Q6GNF1 | 360 | Nucleoporin seh1-B OS=Xen | N/A | N/A | 0.857 | 0.469 | 0.456 | 1e-41 | |
| C1BK83 | 364 | Nucleoporin seh1 OS=Osmer | N/A | N/A | 0.868 | 0.469 | 0.436 | 3e-41 | |
| Q6TGU2 | 364 | Nucleoporin seh1 OS=Danio | yes | N/A | 0.857 | 0.464 | 0.411 | 4e-41 | |
| Q10099 | 339 | Nucleoporin seh1 OS=Schiz | yes | N/A | 0.837 | 0.486 | 0.337 | 3e-21 |
| >sp|Q5RAN6|SEH1_PONAB Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 41/208 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAY------DYYGLRMATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHY 153
+HD+A+ ++ L +AT D I ++T T+F+I + +F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAIAT--KDVRIFTLKPVRKELTSSGGPTKFEIHIVAHFDNHN 278
Query: 154 CTVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 279 SQVWRVSWNITGTVLASSGDDGCVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Pongo abelii (taxid: 9601) |
| >sp|Q96EE3|SEH1_HUMAN Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 128/208 (61%), Gaps = 41/208 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAY------DYYGLRMATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHY 153
+HD+A+ ++ L +AT D I ++T T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAIAT--KDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHN 278
Query: 154 CTVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 279 SQVWRVSWNITGTVLASSGDDGCVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Homo sapiens (taxid: 9606) |
| >sp|A7YY75|SEH1_BOVIN Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 128/208 (61%), Gaps = 41/208 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR ++ I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHAPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLLTVTD 220
Query: 108 LIHDVAY------DYYGLRMATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHY 153
+HD+A+ ++ L +AT D I ++T T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAIAT--KDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHN 278
Query: 154 CTVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 279 SQVWRVSWNITGTVLASSGDDGCVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Bos taurus (taxid: 9913) |
| >sp|Q8R2U0|SEH1_MOUSE Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 125/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VR+YEAPDVMNLSQW LQHEV+
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHEVS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR + I++ + S N+ K D
Sbjct: 161 CKLCCSCISWNPSSSRAHPPMIAVGSDDSSPNSMAKVQIFEYNENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I ++T T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGPTKFEIHIVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGCVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Mus musculus (taxid: 10090) |
| >sp|Q4FZW5|SEH1A_XENLA Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVMG--------TRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + + T+F+I T+ F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDG VRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGTVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Xenopus laevis (taxid: 8355) |
| >sp|Q5U4Y8|SEH1_XENTR Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1 | Back alignment and function description |
|---|
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVMG--------TRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + + T+F+I T+ F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDG VRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGTVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Xenopus tropicalis (taxid: 8364) |
| >sp|Q6GNF1|SEH1B_XENLA Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 123/206 (59%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVMG--------TRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + + T+F+ T+ F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFENHTVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDG VRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGTVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Xenopus laevis (taxid: 8355) |
| >sp|C1BK83|SEH1_OSMMO Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1 | Back alignment and function description |
|---|
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 122/211 (57%), Gaps = 40/211 (18%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68
++ L+ W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQ
Sbjct: 97 QRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ 156
Query: 69 HEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK---------------------- 106
HE++C SC++WN S SR +S I + N +
Sbjct: 157 HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSNTAYSGKVQIYEYVENTRKYAKVETLM 216
Query: 107 ---DLIHDVAY------DYYGLRMATCSSDQNI-------KVTRDVMGTRFDIETIGNFE 150
D +HD+A+ ++ L +AT D I K + T+ +++ F+
Sbjct: 217 TVTDPVHDIAFAPNLGRSFHVLAIAT--KDVRIFKLIPMRKESSSSGPTKLEVQLQAQFD 274
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
H VWRVSWNIT T++ASSGDDGCVRLWK
Sbjct: 275 GHNSQVWRVSWNITSTLLASSGDDGCVRLWK 305
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Osmerus mordax (taxid: 8014) |
| >sp|Q6TGU2|SEH1_DANRE Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2 | Back alignment and function description |
|---|
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 45/214 (21%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68
++ + W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQ
Sbjct: 97 QRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ 156
Query: 69 HEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK---------------------- 106
HE++C SC++WN S SR + I N +
Sbjct: 157 HEISCKLACSCISWNPSSSRAHPPMIAVGGDDSNGAYSGKVQIHEYNENTRKYAKAETLM 216
Query: 107 ---DLIHDVAY------DYYGLRMATCSSDQNIKVTR----------DVMGTRFDIETIG 147
D +HD+A+ ++ L +AT +++++ + T+F+++ +
Sbjct: 217 TVTDPVHDIAFAPNLGRSFHVLAIAT----KDVRIFKLLPLRRESANSSGPTKFEVQVMA 272
Query: 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
F+ H VWRVSWNIT T++ASSGDDGCVRLWK
Sbjct: 273 QFDSHNSQVWRVSWNITSTLLASSGDDGCVRLWK 306
|
Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. This subunit plays a role in recruitment of the Nup107-160 subcomplex to the kinetochore. Danio rerio (taxid: 7955) |
| >sp|Q10099|SEH1_SCHPO Nucleoporin seh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=seh1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 54/219 (24%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC- 73
W + L+D+R++V D+ F P Q G LA +AD +RIYEA + NL+ W L +E+A
Sbjct: 101 WVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPGNLTYWTLMNEIALM 160
Query: 74 PTLAS-------CLTWNHSFSRFNSISI-------MYEAHSIN-----AE---HKDLIHD 111
P+ S C+ W S R I++ +Y+ +S AE H DLI D
Sbjct: 161 PSPPSRNEQPAFCVNWCPSRWREQYIAVGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRD 220
Query: 112 VAY------DYYGLRMATCSSDQNIKVTR------DVMGTRFD----------------- 142
+ + YY +AT D N+++ + +V D
Sbjct: 221 ICWAPSMGSSYY--LIATACKDGNVRIFKVETLCEEVFQEEEDAGNSMTEDSNFNLNSLK 278
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+E IG +++H C VWR +N+TGTI++SSGDDGCVRLWK
Sbjct: 279 VELIGEYDNHKCQVWRCRFNVTGTILSSSGDDGCVRLWK 317
|
Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | ||||||
| 242009287 | 363 | nucleoporin seh1, putative [Pediculus hu | 0.928 | 0.504 | 0.461 | 5e-46 | |
| 170038326 | 344 | nucleoporin [Culex quinquefasciatus] gi| | 0.893 | 0.511 | 0.464 | 1e-44 | |
| 307212004 | 405 | Nucleoporin SEH1-like [Harpegnathos salt | 0.832 | 0.404 | 0.468 | 2e-44 | |
| 307187571 | 405 | Nucleoporin SEH1-like [Camponotus florid | 0.852 | 0.414 | 0.497 | 5e-44 | |
| 301775003 | 2971 | PREDICTED: centrosomal protein of 192 kD | 0.857 | 0.056 | 0.470 | 6e-44 | |
| 240848713 | 356 | nucleoporin SEH1-like [Acyrthosiphon pis | 0.842 | 0.466 | 0.464 | 1e-43 | |
| 157113074 | 361 | nucleoporin, putative [Aedes aegypti] gi | 0.893 | 0.487 | 0.469 | 2e-43 | |
| 334325923 | 2865 | PREDICTED: centrosomal protein of 192 kD | 0.857 | 0.058 | 0.461 | 4e-43 | |
| 383852726 | 408 | PREDICTED: nucleoporin seh1-A-like [Mega | 0.878 | 0.424 | 0.473 | 4e-43 | |
| 332026068 | 405 | Nucleoporin seh1-B [Acromyrmex echinatio | 0.852 | 0.414 | 0.487 | 6e-43 |
| >gi|242009287|ref|XP_002425421.1| nucleoporin seh1, putative [Pediculus humanus corporis] gi|212509238|gb|EEB12683.1| nucleoporin seh1, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 38/221 (17%)
Query: 1 MGPSPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM 60
+G E+ + W RR+NLVDSRTSVTDVKFGPK LGL+LAT +ADG+VRIYEAPD+M
Sbjct: 90 IGEGMGSGERGMRHWVRRTNLVDSRTSVTDVKFGPKSLGLILATSSADGVVRIYEAPDIM 149
Query: 61 NLSQWCLQHEVACPTLASCLTWNHSFSRF---------------NSISIMYEAHSINAEH 105
NLSQW LQHE+ C SCL+WN S SR N + +S N+
Sbjct: 150 NLSQWSLQHEILCKLPCSCLSWNTSLSRHHPPMLAIGSDDSNRSNGGKVFLYEYSENSRK 209
Query: 106 ----------KDLIHDVAY------DYYGLRMATCSSDQNIKVTRD-----VMGTRFDIE 144
+D +HD+++ Y+ L +AT D + R+ +RF+IE
Sbjct: 210 WIKSETLSSVQDPVHDISFAPNMGRSYHMLAVAT--KDVRVFTIRESSSVSSGSSRFEIE 267
Query: 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185
+ FEDHY +VWRV+WNITGT++AS+GDDGCVRLWK K
Sbjct: 268 SAAQFEDHYSSVWRVTWNITGTVLASTGDDGCVRLWKANYK 308
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170038326|ref|XP_001847002.1| nucleoporin [Culex quinquefasciatus] gi|167881912|gb|EDS45295.1| nucleoporin [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 130/213 (61%), Gaps = 37/213 (17%)
Query: 4 SPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS 63
SP S + +W RR+NLVDSRTSVTDVKF PK GLVLATC+ADG++RIYEAPD+MNLS
Sbjct: 79 SPTMSP--VKRWVRRTNLVDSRTSVTDVKFSPKSQGLVLATCSADGIIRIYEAPDIMNLS 136
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISI----------------MYEAHSINAEH-- 105
QW L HE+A SCL+WN S R ++ I ++E +S N+
Sbjct: 137 QWTLSHEIAAKIPLSCLSWNQSMFRLHAPMIAAGSDDSSQSSGGKVFIFE-YSENSRRWT 195
Query: 106 --------KDLIHDVAYDYYGLR----MATCSSDQNIKVTRDVM----GTRFDIETIGNF 149
D +HD+A+ R +A S D I + ++ +R DI+ + F
Sbjct: 196 KTDTINSITDPVHDIAFAPNVGRSYHILAVASKDVQIFNLKPILEPTSNSRLDIQAVATF 255
Query: 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182
DHYCTVWRV+WNITGT++AS+GDDGCVR+WK+
Sbjct: 256 GDHYCTVWRVTWNITGTMLASTGDDGCVRMWKM 288
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307212004|gb|EFN87899.1| Nucleoporin SEH1-like [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 43/207 (20%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73
W +R+NLVDSRTSVTDVKF PK LGL+LATC ADG +RIYEAPD+MNLSQW LQH++ C
Sbjct: 103 HWVKRTNLVDSRTSVTDVKFAPKTLGLLLATCNADGFIRIYEAPDIMNLSQWTLQHDINC 162
Query: 74 PTLASCLTWNHSFSRFNSISIMYEAHSINAEH-------------------------KDL 108
SCLTWN S SR + I + N D
Sbjct: 163 RLSLSCLTWNPSLSRLHPPMIAVGSDDTNTSSGAKVFIYEYSESSRRWTKAEALSSITDA 222
Query: 109 IHDVAY------DYYGLRMATCSSDQNIKV-----TRDVMG---TRFDIETIGNFEDHYC 154
+HD+A+ Y+ L +AT +++++ T+D M +R++I + F+DHYC
Sbjct: 223 VHDIAFAPNLGRSYHTLAIAT----KDVRIVTLTPTQDNMQSDVSRYEITVVAQFDDHYC 278
Query: 155 TVWRVSWNITGTIVASSGDDGCVRLWK 181
TVWRV WN+ GTI+ASSGDDGCVRLWK
Sbjct: 279 TVWRVCWNVMGTILASSGDDGCVRLWK 305
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307187571|gb|EFN72583.1| Nucleoporin SEH1-like [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 121/203 (59%), Gaps = 35/203 (17%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73
W +R+NLVDSRTSVTDVKF PK LGL+LATC+ADG +RIYEAPD+MNLSQW LQH++ C
Sbjct: 103 HWIKRTNLVDSRTSVTDVKFAPKTLGLLLATCSADGFIRIYEAPDIMNLSQWTLQHDINC 162
Query: 74 PTLASCLTWNHSFSRFNSISI----------------MYEAHS-----INAEHKDLIHDV 112
SCLTWN S SR +S I +YE + AE I D
Sbjct: 163 KLSCSCLTWNPSLSRLHSPMIAVGSDDSNPLLGAKIFIYEYSESSRRWVKAETLSSITDA 222
Query: 113 AYD----------YYGLRMATCSSD-QNIKVTRDVMGT---RFDIETIGNFEDHYCTVWR 158
YD ++ L +AT +K +D M T F+ + F+DHYCTVWR
Sbjct: 223 VYDIAFAPNLGRNFHTLAIATKDVRIVTLKPIQDNMQTGVSHFETNIVAQFDDHYCTVWR 282
Query: 159 VSWNITGTIVASSGDDGCVRLWK 181
VSWN GTI+ASSGDDGCVRLWK
Sbjct: 283 VSWNFMGTILASSGDDGCVRLWK 305
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|301775003|ref|XP_002922916.1| PREDICTED: centrosomal protein of 192 kDa-like [Ailuropoda melanoleuca] | Back alignment and taxonomy information |
|---|
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 125/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYSENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVM--------GTRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + V T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGCVRLWK 306
|
Source: Ailuropoda melanoleuca Species: Ailuropoda melanoleuca Genus: Ailuropoda Family: Ursidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|240848713|ref|NP_001155661.1| nucleoporin SEH1-like [Acyrthosiphon pisum] gi|239790508|dbj|BAH71811.1| ACYPI006367 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 122/209 (58%), Gaps = 43/209 (20%)
Query: 12 LNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71
L W RR+NLVDSRTSVTDVKFGPK GL+LATC+ADG++RIYEAPD MNL+QW LQHEV
Sbjct: 100 LRHWVRRANLVDSRTSVTDVKFGPKSFGLILATCSADGVMRIYEAPDAMNLAQWPLQHEV 159
Query: 72 ACPTLASCLTWNHSFSRFNSISIMYEAHSIN---------------------------AE 104
+ +SCLTWN S F + + M S + A
Sbjct: 160 SLKVPSSCLTWNPLLSNFRTPNAMIAVGSDDNSNTSNSKVFICEYNEVSRRWAKTESVAS 219
Query: 105 HKDLIHDVAY------DYYGLRMATCSSDQNIKVTR------DVMGTRFDIETIGNFEDH 152
+HD+ + +Y L +AT N+++ + G + IET F DH
Sbjct: 220 VAHPVHDMIFAPNMGRSFYLLAIAT----NNVRILKLKPILDATSGFPYTIETAAQFNDH 275
Query: 153 YCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+CTVWRV+WNITGT++ASSGDDGCVRLWK
Sbjct: 276 FCTVWRVAWNITGTVLASSGDDGCVRLWK 304
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157113074|ref|XP_001651880.1| nucleoporin, putative [Aedes aegypti] gi|157113076|ref|XP_001651881.1| nucleoporin, putative [Aedes aegypti] gi|108877883|gb|EAT42108.1| AAEL006311-PA [Aedes aegypti] gi|403182784|gb|EJY57629.1| AAEL006311-PB [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 37/213 (17%)
Query: 4 SPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS 63
SP S + +W RR+NLVDSRTSVTDVKF PK GLVLATC+ADG++RIYEAPD+MNLS
Sbjct: 95 SPTMSP--VKRWVRRTNLVDSRTSVTDVKFAPKSQGLVLATCSADGIIRIYEAPDIMNLS 152
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISI----------------MYE---------- 97
QW L HE+A SCL+WN S R ++ I ++E
Sbjct: 153 QWTLSHEIAVKIPLSCLSWNQSMFRLHAPMIAAGSDDSSQSSGGKVFIFEYSENSRRWAR 212
Query: 98 AHSINAEHKDLIHDVAYDYYGLR----MATCSSDQ---NIKVTRD-VMGTRFDIETIGNF 149
+IN+ + +HD+A+ R +A S D N+K T + +R DI+ + F
Sbjct: 213 TETINSI-IEPVHDIAFAPNVGRSYHILAVASKDVQIFNLKPTLEPTSNSRLDIQQMAQF 271
Query: 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182
DHYCTVWRV+WNITGT++AS+GDDGCVR+WK+
Sbjct: 272 GDHYCTVWRVTWNITGTMLASTGDDGCVRMWKM 304
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|334325923|ref|XP_001371539.2| PREDICTED: centrosomal protein of 192 kDa-like [Monodelphis domestica] | Back alignment and taxonomy information |
|---|
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 125/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + +S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDNSPNISAKVQIYEYNENTRKYAKAESLMTVTD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVM--------GTRFDIETIGNFEDHYCT 155
+HD+++ R +A + D I + V T+F+I + F++H
Sbjct: 221 PVHDISFAPNLGRSFHILAVATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGCVRLWK 306
|
Source: Monodelphis domestica Species: Monodelphis domestica Genus: Monodelphis Family: Didelphidae Order: Didelphimorphia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|383852726|ref|XP_003701876.1| PREDICTED: nucleoporin seh1-A-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 117/207 (56%), Gaps = 34/207 (16%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68
E+ + W RR+NLVDSR SVTDVKF PK LGL+LATC+ DG++RIYEAPDVMNLSQW LQ
Sbjct: 98 ERGMRHWVRRTNLVDSRKSVTDVKFAPKTLGLLLATCSEDGVIRIYEAPDVMNLSQWTLQ 157
Query: 69 HEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK---------------------- 106
H+++C SCLTWN S SR + I + N
Sbjct: 158 HDISCKLQCSCLTWNPSLSRLHPPMIAVGSDDPNPSAGGKVFIYEYSESSRRWAKTETLA 217
Query: 107 --DLIHDVAYDYYGLR----MATCSSDQNIKVTRDVM------GTRFDIETIGNFEDHYC 154
D +HD+A+ R +A S D I + M RF+I T F DH
Sbjct: 218 IVDPVHDIAFAPNLGRSFHTLAIASKDVRIITLKPTMDSVQSGAPRFEISTAAQFFDHDF 277
Query: 155 TVWRVSWNITGTIVASSGDDGCVRLWK 181
TVWRV WNI GTI+ASSGDDGCVRLWK
Sbjct: 278 TVWRVCWNIMGTILASSGDDGCVRLWK 304
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332026068|gb|EGI66219.1| Nucleoporin seh1-B [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 119/203 (58%), Gaps = 35/203 (17%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73
W +R+NLVDSRTSVTDVKF PK LGL+LATC+ADG +RIYEAPD+MNLSQW LQH++ C
Sbjct: 103 HWIKRTNLVDSRTSVTDVKFAPKTLGLLLATCSADGFIRIYEAPDIMNLSQWTLQHDINC 162
Query: 74 PTLASCLTWNHSFSR----------------FNSISIMYEAHS-----INAEHKDLIHDV 112
SCLTWN S SR F + +YE + AE I D
Sbjct: 163 KLSCSCLTWNPSLSRLHPPMIAVGSDDPNPTFGAKIFIYEYSENSRRWVKAETLSSITDA 222
Query: 113 AYD----------YYGLRMATCSSD-QNIKVTRDVMGT---RFDIETIGNFEDHYCTVWR 158
YD ++ L +AT +K T + T F+ + F+DHYCTVWR
Sbjct: 223 VYDIAFAPNLGRNFHTLAIATKDVRIVTLKPTDESTQTGVSHFETNVVAQFDDHYCTVWR 282
Query: 159 VSWNITGTIVASSGDDGCVRLWK 181
VSWN GTI+ASSGDDGCVRLWK
Sbjct: 283 VSWNCMGTILASSGDDGCVRLWK 305
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | ||||||
| UNIPROTKB|Q5RAN6 | 360 | SEH1L "Nucleoporin SEH1" [Pong | 0.477 | 0.261 | 0.614 | 5.9e-44 | |
| UNIPROTKB|Q96EE3 | 360 | SEH1L "Nucleoporin SEH1" [Homo | 0.477 | 0.261 | 0.614 | 7.6e-44 | |
| UNIPROTKB|I3LR40 | 324 | SEH1L "Uncharacterized protein | 0.385 | 0.234 | 0.710 | 7.6e-44 | |
| UNIPROTKB|E1BYP7 | 419 | SEH1L "Uncharacterized protein | 0.502 | 0.236 | 0.584 | 1.2e-43 | |
| UNIPROTKB|A7YY75 | 360 | SEH1L "Nucleoporin SEH1" [Bos | 0.477 | 0.261 | 0.604 | 1.6e-43 | |
| MGI|MGI:1919374 | 360 | Seh1l "SEH1-like (S. cerevisia | 0.385 | 0.211 | 0.697 | 2.5e-43 | |
| UNIPROTKB|Q5U4Y8 | 360 | seh1l "Nucleoporin seh1" [Xeno | 0.502 | 0.275 | 0.584 | 4.1e-43 | |
| UNIPROTKB|Q4FZW5 | 360 | seh1l-a "Nucleoporin seh1-A" [ | 0.502 | 0.275 | 0.584 | 4.1e-43 | |
| UNIPROTKB|Q6GNF1 | 360 | seh1l-b "Nucleoporin seh1-B" [ | 0.502 | 0.275 | 0.584 | 2.2e-42 | |
| ZFIN|ZDB-GENE-030131-6689 | 364 | seh1l "SEH1-like (S. cerevisia | 0.502 | 0.271 | 0.564 | 5.9e-42 |
| UNIPROTKB|Q5RAN6 SEH1L "Nucleoporin SEH1" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 59/96 (61%), Positives = 74/96 (77%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK 106
C SC++WN S SR +S I++ + S NA K
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAK 196
|
|
| UNIPROTKB|Q96EE3 SEH1L "Nucleoporin SEH1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 59/96 (61%), Positives = 74/96 (77%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK 106
C SC++WN S SR +S I++ + S NA K
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAK 196
|
|
| UNIPROTKB|I3LR40 SEH1L "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 302 (111.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 54/76 (71%), Positives = 64/76 (84%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHEV+
Sbjct: 64 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEVS 123
Query: 73 CPTLASCLTWNHSFSR 88
C SC++WN S SR
Sbjct: 124 CKLSCSCISWNPSSSR 139
|
|
| UNIPROTKB|E1BYP7 SEH1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 59/101 (58%), Positives = 77/101 (76%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + +S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDNSPNILAKVQIYE 201
|
|
| UNIPROTKB|A7YY75 SEH1L "Nucleoporin SEH1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 58/96 (60%), Positives = 74/96 (77%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK 106
C SC++WN S SR ++ I++ + S NA K
Sbjct: 161 CKLSCSCISWNPSSSRAHAPMIAVGSDDSSPNAMAK 196
|
|
| MGI|MGI:1919374 Seh1l "SEH1-like (S. cerevisiae" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 302 (111.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VR+YEAPDVMNLSQW LQHEV+
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHEVS 160
Query: 73 CPTLASCLTWNHSFSR 88
C SC++WN S SR
Sbjct: 161 CKLCCSCISWNPSSSR 176
|
|
| UNIPROTKB|Q5U4Y8 seh1l "Nucleoporin seh1" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYE 201
|
|
| UNIPROTKB|Q4FZW5 seh1l-a "Nucleoporin seh1-A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYE 201
|
|
| UNIPROTKB|Q6GNF1 seh1l-b "Nucleoporin seh1-B" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYE 201
|
|
| ZFIN|ZDB-GENE-030131-6689 seh1l "SEH1-like (S. cerevisiae)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 297 (109.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 57/101 (56%), Positives = 71/101 (70%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNSISIMYEAHSINAEH--KDLIHD 111
C SC++WN S SR + I N + K IH+
Sbjct: 161 CKLACSCISWNPSSSRAHPPMIAVGGDDSNGAYSGKVQIHE 201
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 197 | |||
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-09 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-08 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 4e-07 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-06 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-05 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-04 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 0.001 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.7 bits (130), Expect = 5e-09
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 17/188 (9%)
Query: 12 LNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71
L S L V+ + F P GL++A+ ++DG +R+++ L H
Sbjct: 185 LRTGKPLSTLAGHTDPVSSLAFSPD-GGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSD 243
Query: 72 ACPTLASCLTWNHSF----SRFNSISI-----MYEAHSINAEHKDLIHDVAYDYYGLRMA 122
+ S + + S S +I + + H + VA+ G +A
Sbjct: 244 SV---VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLA 300
Query: 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWK 181
+ SSD +++ G T + H V +S++ G+++ S G DDG +RLW
Sbjct: 301 SGSSDGTVRLWDLETGKLLSSLT---LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357
Query: 182 LKKKRKKK 189
L+ + K
Sbjct: 358 LRTGKPLK 365
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-08
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSW 161
H D ++ VA+ G +A+ S D IK+ +D+ T + H V V++
Sbjct: 134 HTDWVNSVAFSPDGTFVASSSQDGTIKL--------WDLRTGKCVATLTGHTGEVNSVAF 185
Query: 162 NITGTIVASSGDDGCVRLWKLKKKRKKK 189
+ G + SS DG ++LW L +
Sbjct: 186 SPDGEKLLSSSSDGTIKLWDLSTGKCLG 213
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 3e-08
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 50/168 (29%)
Query: 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84
VT V F P G +LAT + DG +++ W L+ TL
Sbjct: 9 TGGVTCVAFSPD--GKLLATGSGDGTIKV-----------WDLETGELLRTLK------- 48
Query: 85 SFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIE 144
H + DVA G +A+ SSD+ I++ +D+E
Sbjct: 49 -------------------GHTGPVRDVAASADGTYLASGSSDKTIRL--------WDLE 81
Query: 145 T---IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
T + H V V+++ G I++SS D +++W ++ +
Sbjct: 82 TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLT 129
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 48.9 bits (115), Expect = 4e-07
Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 20/181 (11%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86
SV V F P G +LA+ ++DG VR++ D+ S L+++
Sbjct: 286 SVLSVAFSPD--GKLLASGSSDGTVRLW---DLETGKLLSSLTLKGHEGPVSSLSFSPDG 340
Query: 87 SRFNSI----------SIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136
S S + E + V++ G +++ S+D +++
Sbjct: 341 SLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLS 400
Query: 137 MGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
G + N + H V + ++ G +AS D +RLW LK K + +
Sbjct: 401 TG-----SLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGK 455
Query: 197 N 197
Sbjct: 456 V 456
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 8e-06
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSW 161
H + VA+ G +AT S D IKV +D+ET + + H V V+
Sbjct: 8 HTGGVTCVAFSPDGKLLATGSGDGTIKV--------WDLETGELLRTLKGHTGPVRDVAA 59
Query: 162 NITGTIVASSGDDGCVRLWKLKKKRK 187
+ GT +AS D +RLW L+
Sbjct: 60 SADGTYLASGSSDKTIRLWDLETGEC 85
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-05
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSW 161
H ++ VA+ G ++ + SSD IK+ +D+ T +G H V V++
Sbjct: 176 HTGEVNSVAFSPDGEKLLSSSSDGTIKL--------WDLSTGKCLGTLRGHENGVNSVAF 227
Query: 162 NITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ G ++AS +DG +R+W L+ +
Sbjct: 228 SPDGYLLASGSEDGTIRVWDLRTGECVQT 256
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-05
Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 28/168 (16%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86
V V F P G +A+ + DG +++++ H + + ++
Sbjct: 137 WVNSVAFSPD--GTFVASSSQDGTIKLWDL-RTGKCVATLTGHTGEV----NSVAFSPDG 189
Query: 87 SRF------NSISI----MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136
+ +I + + H++ ++ VA+ G +A+ S D I+V
Sbjct: 190 EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRV---- 245
Query: 137 MGTRFDIET---IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+D+ T + H +V ++W+ G +AS DG +R+W
Sbjct: 246 ----WDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 1e-04
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+ + + H V V+++ G ++AS DDG VR+W
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 1e-04
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+ + H V V+++ G +AS DDG ++LW
Sbjct: 5 LKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.5 bits (88), Expect = 0.001
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 92 ISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151
+S+ + + H+D I +A+ G + + SSD IK+ D+ I+++
Sbjct: 51 VSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKL-WDLDNGEKLIKSL--EGL 107
Query: 152 HYCTVWRVSW---NITGTIVASSGDDGCVRLWKLKKKRKKKKE 191
H +V +++ + ++ASS DG V+LW L K +
Sbjct: 108 HDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRT 150
|
Length = 466 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0272|consensus | 459 | 99.97 | ||
| KOG0271|consensus | 480 | 99.97 | ||
| KOG0263|consensus | 707 | 99.97 | ||
| KOG0271|consensus | 480 | 99.97 | ||
| KOG0263|consensus | 707 | 99.97 | ||
| KOG0315|consensus | 311 | 99.97 | ||
| KOG0279|consensus | 315 | 99.97 | ||
| KOG0286|consensus | 343 | 99.96 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0273|consensus | 524 | 99.95 | ||
| KOG0645|consensus | 312 | 99.95 | ||
| KOG0284|consensus | 464 | 99.95 | ||
| KOG0645|consensus | 312 | 99.95 | ||
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0295|consensus | 406 | 99.94 | ||
| KOG0279|consensus | 315 | 99.94 | ||
| KOG0266|consensus | 456 | 99.94 | ||
| KOG0266|consensus | 456 | 99.93 | ||
| KOG0286|consensus | 343 | 99.93 | ||
| KOG0281|consensus | 499 | 99.93 | ||
| KOG0284|consensus | 464 | 99.93 | ||
| KOG0276|consensus | 794 | 99.93 | ||
| KOG0275|consensus | 508 | 99.92 | ||
| KOG0291|consensus | 893 | 99.92 | ||
| KOG0293|consensus | 519 | 99.92 | ||
| KOG0277|consensus | 311 | 99.92 | ||
| KOG0319|consensus | 775 | 99.92 | ||
| KOG0315|consensus | 311 | 99.92 | ||
| KOG0282|consensus | 503 | 99.92 | ||
| KOG0292|consensus | 1202 | 99.91 | ||
| KOG0318|consensus | 603 | 99.91 | ||
| KOG2445|consensus | 361 | 99.91 | ||
| KOG0276|consensus | 794 | 99.91 | ||
| KOG0291|consensus | 893 | 99.91 | ||
| KOG0643|consensus | 327 | 99.91 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| PTZ00421 | 493 | coronin; Provisional | 99.91 | |
| KOG0313|consensus | 423 | 99.91 | ||
| KOG0278|consensus | 334 | 99.9 | ||
| KOG0273|consensus | 524 | 99.9 | ||
| KOG0285|consensus | 460 | 99.9 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.9 | |
| KOG0640|consensus | 430 | 99.9 | ||
| KOG0281|consensus | 499 | 99.9 | ||
| KOG0283|consensus | 712 | 99.9 | ||
| KOG0316|consensus | 307 | 99.89 | ||
| KOG0302|consensus | 440 | 99.89 | ||
| KOG0264|consensus | 422 | 99.89 | ||
| KOG0306|consensus | 888 | 99.89 | ||
| KOG0265|consensus | 338 | 99.89 | ||
| KOG1407|consensus | 313 | 99.89 | ||
| KOG0313|consensus | 423 | 99.88 | ||
| KOG0296|consensus | 399 | 99.88 | ||
| KOG0289|consensus | 506 | 99.88 | ||
| KOG0318|consensus | 603 | 99.88 | ||
| KOG0277|consensus | 311 | 99.88 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.88 | |
| KOG0308|consensus | 735 | 99.88 | ||
| KOG0282|consensus | 503 | 99.88 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.88 | |
| KOG2096|consensus | 420 | 99.88 | ||
| KOG0316|consensus | 307 | 99.88 | ||
| KOG0292|consensus | 1202 | 99.87 | ||
| KOG0269|consensus | 839 | 99.87 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.87 | |
| KOG0274|consensus | 537 | 99.87 | ||
| KOG0295|consensus | 406 | 99.87 | ||
| KOG1446|consensus | 311 | 99.87 | ||
| KOG0264|consensus | 422 | 99.87 | ||
| KOG0308|consensus | 735 | 99.87 | ||
| KOG0772|consensus | 641 | 99.87 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.86 | |
| KOG0296|consensus | 399 | 99.86 | ||
| KOG0310|consensus | 487 | 99.86 | ||
| KOG0772|consensus | 641 | 99.86 | ||
| KOG0283|consensus | 712 | 99.86 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.86 | |
| KOG0265|consensus | 338 | 99.86 | ||
| KOG0289|consensus | 506 | 99.86 | ||
| KOG0275|consensus | 508 | 99.85 | ||
| KOG0267|consensus | 825 | 99.85 | ||
| KOG0293|consensus | 519 | 99.85 | ||
| KOG0294|consensus | 362 | 99.85 | ||
| KOG1332|consensus | 299 | 99.85 | ||
| KOG0305|consensus | 484 | 99.84 | ||
| KOG0973|consensus | 942 | 99.84 | ||
| KOG0268|consensus | 433 | 99.84 | ||
| KOG0640|consensus | 430 | 99.83 | ||
| KOG0647|consensus | 347 | 99.83 | ||
| KOG1332|consensus | 299 | 99.83 | ||
| KOG0274|consensus | 537 | 99.83 | ||
| KOG4283|consensus | 397 | 99.83 | ||
| KOG0288|consensus | 459 | 99.83 | ||
| KOG0639|consensus | 705 | 99.82 | ||
| KOG0646|consensus | 476 | 99.82 | ||
| KOG0305|consensus | 484 | 99.82 | ||
| KOG1446|consensus | 311 | 99.82 | ||
| KOG0268|consensus | 433 | 99.82 | ||
| KOG0973|consensus | 942 | 99.82 | ||
| KOG0303|consensus | 472 | 99.81 | ||
| KOG0641|consensus | 350 | 99.81 | ||
| KOG0300|consensus | 481 | 99.8 | ||
| KOG0301|consensus | 745 | 99.8 | ||
| KOG0310|consensus | 487 | 99.79 | ||
| KOG1188|consensus | 376 | 99.79 | ||
| KOG1007|consensus | 370 | 99.79 | ||
| KOG4283|consensus | 397 | 99.79 | ||
| KOG4378|consensus | 673 | 99.79 | ||
| KOG0294|consensus | 362 | 99.78 | ||
| KOG0301|consensus | 745 | 99.78 | ||
| KOG1407|consensus | 313 | 99.77 | ||
| KOG0269|consensus | 839 | 99.76 | ||
| KOG0278|consensus | 334 | 99.76 | ||
| KOG1036|consensus | 323 | 99.76 | ||
| KOG4328|consensus | 498 | 99.76 | ||
| KOG0302|consensus | 440 | 99.76 | ||
| KOG0306|consensus | 888 | 99.76 | ||
| KOG1539|consensus | 910 | 99.75 | ||
| KOG0300|consensus | 481 | 99.75 | ||
| KOG0307|consensus | 1049 | 99.75 | ||
| KOG0299|consensus | 479 | 99.75 | ||
| KOG0267|consensus | 825 | 99.75 | ||
| KOG1034|consensus | 385 | 99.75 | ||
| KOG0650|consensus | 733 | 99.74 | ||
| KOG0639|consensus | 705 | 99.74 | ||
| KOG0270|consensus | 463 | 99.74 | ||
| KOG0641|consensus | 350 | 99.73 | ||
| KOG0647|consensus | 347 | 99.73 | ||
| KOG2445|consensus | 361 | 99.73 | ||
| KOG0270|consensus | 463 | 99.73 | ||
| KOG1408|consensus | 1080 | 99.72 | ||
| KOG0642|consensus | 577 | 99.71 | ||
| KOG1445|consensus | 1012 | 99.71 | ||
| KOG1036|consensus | 323 | 99.7 | ||
| KOG0299|consensus | 479 | 99.7 | ||
| KOG1273|consensus | 405 | 99.7 | ||
| KOG1523|consensus | 361 | 99.7 | ||
| KOG1539|consensus | 910 | 99.69 | ||
| KOG0643|consensus | 327 | 99.69 | ||
| KOG2048|consensus | 691 | 99.68 | ||
| KOG1063|consensus | 764 | 99.67 | ||
| KOG1408|consensus | 1080 | 99.67 | ||
| KOG1274|consensus | 933 | 99.66 | ||
| KOG0307|consensus | 1049 | 99.66 | ||
| KOG1034|consensus | 385 | 99.65 | ||
| KOG1310|consensus | 758 | 99.65 | ||
| KOG1009|consensus | 434 | 99.64 | ||
| KOG2096|consensus | 420 | 99.64 | ||
| KOG2919|consensus | 406 | 99.64 | ||
| KOG1063|consensus | 764 | 99.64 | ||
| KOG2110|consensus | 391 | 99.63 | ||
| KOG1524|consensus | 737 | 99.63 | ||
| KOG2055|consensus | 514 | 99.62 | ||
| KOG1007|consensus | 370 | 99.61 | ||
| KOG2106|consensus | 626 | 99.61 | ||
| KOG0646|consensus | 476 | 99.6 | ||
| KOG0288|consensus | 459 | 99.6 | ||
| KOG0290|consensus | 364 | 99.59 | ||
| KOG2048|consensus | 691 | 99.59 | ||
| KOG2055|consensus | 514 | 99.58 | ||
| KOG0649|consensus | 325 | 99.58 | ||
| KOG0644|consensus | 1113 | 99.58 | ||
| KOG1274|consensus | 933 | 99.57 | ||
| KOG0321|consensus | 720 | 99.57 | ||
| KOG0322|consensus | 323 | 99.56 | ||
| KOG0771|consensus | 398 | 99.56 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.55 | |
| KOG0321|consensus | 720 | 99.55 | ||
| KOG4328|consensus | 498 | 99.54 | ||
| KOG2394|consensus | 636 | 99.54 | ||
| KOG0771|consensus | 398 | 99.53 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.53 | |
| KOG2106|consensus | 626 | 99.52 | ||
| KOG0290|consensus | 364 | 99.52 | ||
| KOG0303|consensus | 472 | 99.51 | ||
| KOG1273|consensus | 405 | 99.51 | ||
| KOG2394|consensus | 636 | 99.51 | ||
| KOG1523|consensus | 361 | 99.5 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.5 | |
| KOG1272|consensus | 545 | 99.49 | ||
| KOG1445|consensus | 1012 | 99.49 | ||
| KOG1538|consensus | 1081 | 99.47 | ||
| KOG4378|consensus | 673 | 99.45 | ||
| KOG4227|consensus | 609 | 99.45 | ||
| KOG1188|consensus | 376 | 99.45 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.44 | |
| KOG1587|consensus | 555 | 99.44 | ||
| KOG2111|consensus | 346 | 99.42 | ||
| KOG1009|consensus | 434 | 99.42 | ||
| KOG0974|consensus | 967 | 99.39 | ||
| KOG2139|consensus | 445 | 99.38 | ||
| KOG0649|consensus | 325 | 99.37 | ||
| KOG1963|consensus | 792 | 99.35 | ||
| KOG1240|consensus | 1431 | 99.33 | ||
| KOG1517|consensus | 1387 | 99.33 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.32 | |
| KOG1524|consensus | 737 | 99.31 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.3 | |
| KOG2919|consensus | 406 | 99.29 | ||
| KOG3881|consensus | 412 | 99.28 | ||
| KOG2110|consensus | 391 | 99.27 | ||
| KOG0644|consensus | 1113 | 99.24 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 99.24 | |
| KOG1538|consensus | 1081 | 99.23 | ||
| KOG1517|consensus | 1387 | 99.22 | ||
| KOG1587|consensus | 555 | 99.21 | ||
| KOG4497|consensus | 447 | 99.2 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 99.2 | |
| KOG2111|consensus | 346 | 99.2 | ||
| KOG0322|consensus | 323 | 99.2 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.19 | |
| KOG0642|consensus | 577 | 99.18 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.15 | |
| KOG4547|consensus | 541 | 99.11 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.1 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.09 | |
| KOG0280|consensus | 339 | 99.09 | ||
| KOG3914|consensus | 390 | 99.09 | ||
| KOG1064|consensus | 2439 | 99.07 | ||
| KOG4190|consensus | 1034 | 99.06 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.06 | |
| KOG4227|consensus | 609 | 99.06 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.06 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.05 | |
| KOG2139|consensus | 445 | 99.04 | ||
| KOG1963|consensus | 792 | 99.04 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.04 | |
| KOG0974|consensus | 967 | 99.02 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.01 | |
| KOG1272|consensus | 545 | 99.01 | ||
| KOG2321|consensus | 703 | 99.0 | ||
| KOG1334|consensus | 559 | 99.0 | ||
| KOG1310|consensus | 758 | 98.99 | ||
| KOG1409|consensus | 404 | 98.98 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.97 | |
| KOG1064|consensus | 2439 | 98.97 | ||
| KOG2321|consensus | 703 | 98.96 | ||
| KOG4714|consensus | 319 | 98.95 | ||
| KOG1240|consensus | 1431 | 98.94 | ||
| KOG1354|consensus | 433 | 98.89 | ||
| KOG1409|consensus | 404 | 98.88 | ||
| KOG1334|consensus | 559 | 98.87 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.86 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.81 | |
| KOG2695|consensus | 425 | 98.8 | ||
| KOG0309|consensus | 1081 | 98.8 | ||
| KOG0280|consensus | 339 | 98.78 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.77 | |
| KOG2315|consensus | 566 | 98.76 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.74 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.7 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.69 | |
| KOG1354|consensus | 433 | 98.68 | ||
| KOG3881|consensus | 412 | 98.68 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.64 | |
| KOG3914|consensus | 390 | 98.62 | ||
| KOG0882|consensus | 558 | 98.61 | ||
| KOG4497|consensus | 447 | 98.61 | ||
| KOG4547|consensus | 541 | 98.6 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.57 | |
| KOG4532|consensus | 344 | 98.57 | ||
| KOG0650|consensus | 733 | 98.56 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.54 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.52 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.51 | |
| KOG4714|consensus | 319 | 98.51 | ||
| KOG2066|consensus | 846 | 98.5 | ||
| KOG2041|consensus | 1189 | 98.47 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.45 | |
| KOG4190|consensus | 1034 | 98.43 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.37 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.36 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.35 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.33 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 98.31 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.3 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 98.27 | |
| KOG2041|consensus | 1189 | 98.23 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.2 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.19 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.19 | |
| KOG0309|consensus | 1081 | 98.14 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.07 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.07 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.07 | |
| KOG2695|consensus | 425 | 98.0 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.98 | |
| KOG1275|consensus | 1118 | 97.97 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 97.96 | |
| KOG1832|consensus | 1516 | 97.95 | ||
| KOG1645|consensus | 463 | 97.93 | ||
| KOG3617|consensus | 1416 | 97.93 | ||
| KOG1008|consensus | 783 | 97.91 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 97.91 | |
| KOG4532|consensus | 344 | 97.91 | ||
| KOG2315|consensus | 566 | 97.89 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 97.86 | |
| KOG4640|consensus | 665 | 97.83 | ||
| KOG1912|consensus | 1062 | 97.76 | ||
| KOG3621|consensus | 726 | 97.73 | ||
| KOG1645|consensus | 463 | 97.72 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.69 | |
| KOG1912|consensus | 1062 | 97.65 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.65 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.6 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.6 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.59 | |
| KOG1920|consensus | 1265 | 97.43 | ||
| KOG1008|consensus | 783 | 97.4 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.38 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.33 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.29 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.26 | |
| KOG1275|consensus | 1118 | 97.25 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.25 | |
| KOG4640|consensus | 665 | 97.25 | ||
| KOG2314|consensus | 698 | 97.25 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.24 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.22 | |
| KOG2314|consensus | 698 | 97.17 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.13 | |
| KOG4649|consensus | 354 | 97.12 | ||
| KOG2114|consensus | 933 | 97.09 | ||
| KOG1920|consensus | 1265 | 97.08 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.08 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.06 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.88 | |
| KOG2444|consensus | 238 | 96.87 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 96.85 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 96.75 | |
| KOG3617|consensus | 1416 | 96.67 | ||
| KOG0882|consensus | 558 | 96.64 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.55 | |
| KOG2114|consensus | 933 | 96.54 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.53 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 96.53 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.19 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 96.12 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.06 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.04 | |
| KOG2066|consensus | 846 | 96.02 | ||
| KOG2395|consensus | 644 | 95.96 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 95.81 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 95.71 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 95.7 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 95.7 | |
| KOG3621|consensus | 726 | 95.61 | ||
| KOG2079|consensus | 1206 | 95.5 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 95.36 | |
| KOG2079|consensus | 1206 | 95.36 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 95.34 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 95.07 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 94.8 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 94.72 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 94.71 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 94.63 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 94.52 | |
| KOG4499|consensus | 310 | 94.39 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 94.01 | |
| KOG1916|consensus | 1283 | 93.96 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 93.88 | |
| KOG1832|consensus | 1516 | 93.83 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 93.11 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 92.77 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 92.72 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 92.51 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 92.44 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 92.4 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 92.3 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 92.04 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 92.0 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 91.67 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 91.65 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 91.48 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 91.39 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 91.29 | |
| KOG2377|consensus | 657 | 91.06 | ||
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 91.04 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 90.26 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 90.14 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 89.4 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 89.16 | |
| KOG4649|consensus | 354 | 88.72 | ||
| KOG3630|consensus | 1405 | 88.59 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 88.14 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 88.11 | |
| KOG1897|consensus | 1096 | 87.44 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 87.27 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 87.13 | |
| KOG4460|consensus | 741 | 86.99 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 86.83 | |
| KOG4441|consensus | 571 | 86.73 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 86.43 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 86.02 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 85.94 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 85.05 | |
| KOG2280|consensus | 829 | 84.55 | ||
| KOG1916|consensus | 1283 | 84.55 | ||
| PF01436 | 28 | NHL: NHL repeat; InterPro: IPR001258 The NHL repea | 84.3 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 84.23 | |
| KOG4499|consensus | 310 | 83.72 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 83.31 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 83.03 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 82.8 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 82.46 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 82.1 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 81.04 | |
| KOG2444|consensus | 238 | 80.7 | ||
| PF12341 | 27 | DUF3639: Protein of unknown function (DUF3639) ; I | 80.51 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 80.25 | |
| PF01731 | 86 | Arylesterase: Arylesterase; InterPro: IPR002640 Th | 80.16 | |
| KOG4441|consensus | 571 | 80.02 |
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=197.64 Aligned_cols=179 Identities=20% Similarity=0.236 Sum_probs=158.5
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+...|+++++|+... .|.+|...|..++|+|+ |++|+|+|.|.+-++||+.++..+. ..--+...|.+
T Consensus 236 t~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPs--G~~L~TasfD~tWRlWD~~tk~ElL-----~QEGHs~~v~~ 308 (459)
T KOG0272|consen 236 TASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPS--GKFLGTASFDSTWRLWDLETKSELL-----LQEGHSKGVFS 308 (459)
T ss_pred eeccCCceeeeccCCCcchhhhhcchhhheeeeecCC--CceeeecccccchhhcccccchhhH-----hhcccccccce
Confidence 457899999999875 48899999999999999 9999999999999999999876442 22223789999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
++|.++|..++++ -++|| +-.+. +|..+|.+++|+|+...++||+.|++++|||++. ...+..
T Consensus 309 iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~-gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~-----r~~ly~ 382 (459)
T KOG0272|consen 309 IAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLA-GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM-----RSELYT 382 (459)
T ss_pred eEecCCCceeeccCccchhheeecccCcEEEEec-ccccceeeEeECCCceEEeecCCCCcEEEeeecc-----ccccee
Confidence 9999999998877 59999 55667 8999999999998888889999999999999986 567889
Q ss_pred ecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 149 FEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
+.+|.+-|+.+.|+| .|.+|+|++.|++++||..++..+.+.+..||+
T Consensus 383 ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~ 431 (459)
T KOG0272|consen 383 IPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEG 431 (459)
T ss_pred cccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCcc
Confidence 999999999999999 689999999999999999999888888888875
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=192.86 Aligned_cols=177 Identities=18% Similarity=0.198 Sum_probs=149.5
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.-.|.+++|+.. .+|.+|.+.|.++.|+|...+.-+|||+.||++++|++.+...+..+. .+..+|..++
T Consensus 194 swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~-----gH~~RVs~Va 268 (459)
T KOG0272|consen 194 SWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLE-----GHLARVSRVA 268 (459)
T ss_pred ecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhh-----cchhhheeee
Confidence 446778888754 579999999999999996336689999999999999998875544332 1256899999
Q ss_pred EccCCCcccce-----eEEEEe------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 82 WNHSFSRFNSI-----SIMYEA------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
|+|+|++|+++ -++||+ .... +|...|.+++|+++.-+++||+.|..-+|||+++ +.++..+.
T Consensus 269 fHPsG~~L~TasfD~tWRlWD~~tk~ElL~QE-GHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRt-----gr~im~L~ 342 (459)
T KOG0272|consen 269 FHPSGKFLGTASFDSTWRLWDLETKSELLLQE-GHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRT-----GRCIMFLA 342 (459)
T ss_pred ecCCCceeeecccccchhhcccccchhhHhhc-ccccccceeEecCCCceeeccCccchhheeeccc-----CcEEEEec
Confidence 99999999887 389992 2334 8999999999995554459999999999999998 78899999
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
+|..+|.+++|+|+|..|||||.|++++|||++......+++.|
T Consensus 343 gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH 386 (459)
T KOG0272|consen 343 GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAH 386 (459)
T ss_pred ccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccc
Confidence 99999999999999999999999999999999988877766654
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=189.85 Aligned_cols=180 Identities=17% Similarity=0.386 Sum_probs=146.5
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (197)
++..|.++|+|++.. +.++|...|.|++|+|+ |..||+|+.||+|++||.++++.+ ...+.+ ...|+
T Consensus 132 tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPD--gk~iASG~~dg~I~lwdpktg~~~-----g~~l~gH~K~It 204 (480)
T KOG0271|consen 132 TGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPD--GKKIASGSKDGSIRLWDPKTGQQI-----GRALRGHKKWIT 204 (480)
T ss_pred ecCCCceEEeeccCCCCcceeecCCccEEEEEEECCC--cchhhccccCCeEEEecCCCCCcc-----cccccCccccee
Confidence 467889999999864 57899999999999999 999999999999999999887643 223332 56677
Q ss_pred eEEEccC-----CCcccce-----e-----------------------------------------EEEE----------
Q psy13207 79 CLTWNHS-----FSRFNSI-----S-----------------------------------------IMYE---------- 97 (197)
Q Consensus 79 ~~~~~~~-----~~~~~~~-----~-----------------------------------------~~~~---------- 97 (197)
+++|.|- .++++++ + ++|+
T Consensus 205 ~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~l 284 (480)
T KOG0271|consen 205 ALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCREL 284 (480)
T ss_pred EEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhh
Confidence 7777653 2333332 2 3333
Q ss_pred ---------------------------------------------------------------------------eeEec
Q psy13207 98 ---------------------------------------------------------------------------AHSIN 102 (197)
Q Consensus 98 ---------------------------------------------------------------------------~~~~~ 102 (197)
+..+.
T Consensus 285 kGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmt 364 (480)
T KOG0271|consen 285 KGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMT 364 (480)
T ss_pred cccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhh
Confidence 22344
Q ss_pred ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 103 AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 103 ~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
+|...|+.+.|+|+..++++++.|+.|++||.++ ++.+..|++|-..|+.++|+.|.++|++||.|.++++|++
T Consensus 365 -gHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~t-----Gk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 365 -GHQALVNHVSFSPDGRYIASASFDKSVKLWDGRT-----GKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDV 438 (480)
T ss_pred -chhhheeeEEECCCccEEEEeecccceeeeeCCC-----cchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEe
Confidence 7888899999997777779999999999999987 7889999999999999999999999999999999999999
Q ss_pred CCCcchhhhhhhhhC
Q psy13207 183 KKKRKKKKEEEEEEN 197 (197)
Q Consensus 183 ~~~~~~~~~~~~~e~ 197 (197)
++.+....++.+++|
T Consensus 439 ~tkKl~~DLpGh~DE 453 (480)
T KOG0271|consen 439 RTKKLKQDLPGHADE 453 (480)
T ss_pred eeeeecccCCCCCce
Confidence 999888888877664
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=198.24 Aligned_cols=167 Identities=21% Similarity=0.370 Sum_probs=147.6
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..+|.++|+|.+.. .++||..||+++.|+|. |.+|||+|.|++.++|.......++.+. -+-..+.|+
T Consensus 469 cSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~--GyYFatas~D~tArLWs~d~~~PlRifa-----ghlsDV~cv 541 (707)
T KOG0263|consen 469 CSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR--GYYFATASHDQTARLWSTDHNKPLRIFA-----GHLSDVDCV 541 (707)
T ss_pred ccCCcceeeeecccceeEEEecCCCcceeeEEecCC--ceEEEecCCCceeeeeecccCCchhhhc-----ccccccceE
Confidence 46789999999874 47899999999999999 9999999999999999988765443322 114678999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+|+..+++++ +++|| ++.|. +|...|.+++|+|....|++|+.|+.|++||+.+ +..+..+
T Consensus 542 ~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~-GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~-----~~~v~~l 615 (707)
T KOG0263|consen 542 SFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT-GHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN-----GSLVKQL 615 (707)
T ss_pred EECCcccccccCCCCceEEEEEcCCCcEEEEec-CCCCceEEEEEcCCCceEeecccCCcEEEEEcCC-----Ccchhhh
Confidence 999999999987 79999 88888 9999999999995555559999999999999987 7889999
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.+|++.|.++.|+++|..||+|+.|.+|++||+.+.
T Consensus 616 ~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 616 KGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred hcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 999999999999999999999999999999999754
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=182.87 Aligned_cols=161 Identities=19% Similarity=0.353 Sum_probs=139.3
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
.+.||..+|.|++|+|+ |..|+||+.|.++++||+.+...+.+.+ .+..-|.|++|+||++.++++ |+
T Consensus 110 S~~GH~e~Vl~~~fsp~--g~~l~tGsGD~TvR~WD~~TeTp~~t~K-----gH~~WVlcvawsPDgk~iASG~~dg~I~ 182 (480)
T KOG0271|consen 110 SIAGHGEAVLSVQFSPT--GSRLVTGSGDTTVRLWDLDTETPLFTCK-----GHKNWVLCVAWSPDGKKIASGSKDGSIR 182 (480)
T ss_pred ccCCCCCcEEEEEecCC--CceEEecCCCceEEeeccCCCCcceeec-----CCccEEEEEEECCCcchhhccccCCeEE
Confidence 47899999999999998 9999999999999999999876543322 126789999999999999887 89
Q ss_pred EEE-------eeEecccCCCceeEEEEc-----CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 95 MYE-------AHSINAEHKDLIHDVAYD-----YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 95 ~~~-------~~~~~~~~~~~i~~~~~~-----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+|| ...+. +|...|++++|. +..-+|++++.||.++|||+.. +.++..+.+|+.+|+|+.|-
T Consensus 183 lwdpktg~~~g~~l~-gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~-----~~~~~~lsgHT~~VTCvrwG 256 (480)
T KOG0271|consen 183 LWDPKTGQQIGRALR-GHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL-----GTCVRTLSGHTASVTCVRWG 256 (480)
T ss_pred EecCCCCCccccccc-CcccceeEEeecccccCCCccceecccCCCCEEEEEccC-----ceEEEEeccCccceEEEEEc
Confidence 999 55677 999999999998 3333559999999999999975 78899999999999999997
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 163 ITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
-+| ++++||.|++|++|+...+....++..|
T Consensus 257 G~g-liySgS~DrtIkvw~a~dG~~~r~lkGH 287 (480)
T KOG0271|consen 257 GEG-LIYSGSQDRTIKVWRALDGKLCRELKGH 287 (480)
T ss_pred CCc-eEEecCCCceEEEEEccchhHHHhhccc
Confidence 655 8999999999999999988777777654
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=196.73 Aligned_cols=162 Identities=18% Similarity=0.244 Sum_probs=144.6
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
++.+|.++|..++|+|+ .++|++||+|+++++|.+.+...+..++ .+..+|..+.|+|-|-+++++ -+
T Consensus 446 ~L~GH~GPVyg~sFsPd--~rfLlScSED~svRLWsl~t~s~~V~y~-----GH~~PVwdV~F~P~GyYFatas~D~tAr 518 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPD--RRFLLSCSEDSSVRLWSLDTWSCLVIYK-----GHLAPVWDVQFAPRGYYFATASHDQTAR 518 (707)
T ss_pred EeecCCCceeeeeeccc--ccceeeccCCcceeeeecccceeEEEec-----CCCcceeeEEecCCceEEEecCCCceee
Confidence 47899999999999999 9999999999999999999876654433 226789999999999999877 48
Q ss_pred EEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 95 MYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 95 ~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
+|. ++.+. +|.+.|.|+.|+|+.-++++|+.|.+||+||..+ +..++.|.||.++|.+++|||+|++|
T Consensus 519 LWs~d~~~PlRifa-ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~-----G~~VRiF~GH~~~V~al~~Sp~Gr~L 592 (707)
T KOG0263|consen 519 LWSTDHNKPLRIFA-GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST-----GNSVRIFTGHKGPVTALAFSPCGRYL 592 (707)
T ss_pred eeecccCCchhhhc-ccccccceEEECCcccccccCCCCceEEEEEcCC-----CcEEEEecCCCCceEEEEEcCCCceE
Confidence 898 77777 9999999999996555559999999999999977 78899999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 169 ASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
++|+.||.|.+||+.++..+..+.+|
T Consensus 593 aSg~ed~~I~iWDl~~~~~v~~l~~H 618 (707)
T KOG0263|consen 593 ASGDEDGLIKIWDLANGSLVKQLKGH 618 (707)
T ss_pred eecccCCcEEEEEcCCCcchhhhhcc
Confidence 99999999999999999888877766
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-29 Score=169.12 Aligned_cols=179 Identities=18% Similarity=0.260 Sum_probs=151.1
Q ss_pred Ccccccccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 5 PLQSEKCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
.+.+|+++|+|+++. ....|.++|+++..+|+ ...|++|.++|.|++||+.......+... +...++.++
T Consensus 100 TgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpn--QteLis~dqsg~irvWDl~~~~c~~~liP----e~~~~i~sl 173 (311)
T KOG0315|consen 100 TGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPN--QTELISGDQSGNIRVWDLGENSCTHELIP----EDDTSIQSL 173 (311)
T ss_pred ecCCCceEEEEeccCcccchhccCCCCcceEEecCC--cceEEeecCCCcEEEEEccCCccccccCC----CCCcceeeE
Confidence 467899999999985 34568899999999998 88899999999999999987644332221 225789999
Q ss_pred EEccCCCcccce-----eEEEE------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
...|+|..++++ .++|+ +..++ .|...+..+.++|+.-+|++|+.|.+++||+.+. . .
T Consensus 174 ~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~-ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~---~-~ 248 (311)
T KOG0315|consen 174 TVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQ-AHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDD---F-F 248 (311)
T ss_pred EEcCCCcEEEEecCCccEEEEEccCCCccccceEhhhee-cccceEEEEEECCCCcEEEeecCCceEEEEecCC---c-e
Confidence 999999998766 68998 56677 8999999999997766669999999999999976 2 3
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
+....+.+|..+++.++||.||+||++++.|+.+++|++..++++...+.+
T Consensus 249 kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh 299 (311)
T KOG0315|consen 249 KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGH 299 (311)
T ss_pred eeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCc
Confidence 555678899999999999999999999999999999999999887766544
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=171.56 Aligned_cols=176 Identities=18% Similarity=0.251 Sum_probs=148.7
Q ss_pred Ccccccccceeeee----------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccC
Q psy13207 5 PLQSEKCLNQWTRR----------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74 (197)
Q Consensus 5 ~~~~~~~~~~w~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 74 (197)
+...|+++-.|++. ..|.||...|..+..+++ |++.++++.|+++++||+.+++..+++. -+.
T Consensus 33 sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~d--g~~alS~swD~~lrlWDl~~g~~t~~f~-----GH~ 105 (315)
T KOG0279|consen 33 SASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSD--GNFALSASWDGTLRLWDLATGESTRRFV-----GHT 105 (315)
T ss_pred EcccceEEEEEEeccCccccCceeeeeeccceEecceEEccC--CceEEeccccceEEEEEecCCcEEEEEE-----ecC
Confidence 45678888888764 358899999999999999 9999999999999999999986544333 126
Q ss_pred CCeeeEEEccCCCcccce-----eEEEE-----eeEec-ccCCCceeEEEEcCC--CeEEEEeeCCCeEEEEEccCCccc
Q psy13207 75 TLASCLTWNHSFSRFNSI-----SIMYE-----AHSIN-AEHKDLIHDVAYDYY--GLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~-~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
..+.+++|+++.+.+.++ +.+|+ ..++. ..+...|.|++|+|+ ...|++++.|++|++||+++
T Consensus 106 ~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~---- 181 (315)
T KOG0279|consen 106 KDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN---- 181 (315)
T ss_pred CceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC----
Confidence 789999999999999877 89999 22333 134789999999966 55669999999999999987
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+....+.+|...++.+++||||.++++|+.||.+.+||++.++....++
T Consensus 182 -~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~ 231 (315)
T KOG0279|consen 182 -CQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE 231 (315)
T ss_pred -cchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc
Confidence 67778889999999999999999999999999999999999988766554
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-27 Score=163.63 Aligned_cols=165 Identities=14% Similarity=0.170 Sum_probs=145.6
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
+...+|++|...|.++.|+++ .++|+++|+||.+.|||.-+.++...+.+. ..-|..++|+|++++++.+
T Consensus 46 ~~rr~LkGH~~Ki~~~~ws~D--sr~ivSaSqDGklIvWDs~TtnK~haipl~-----s~WVMtCA~sPSg~~VAcGGLd 118 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIYAMDWSTD--SRRIVSASQDGKLIVWDSFTTNKVHAIPLP-----SSWVMTCAYSPSGNFVACGGLD 118 (343)
T ss_pred eeEEEecccccceeeeEecCC--cCeEEeeccCCeEEEEEcccccceeEEecC-----ceeEEEEEECCCCCeEEecCcC
Confidence 344679999999999999999 999999999999999999887665444332 4578999999999999887
Q ss_pred --eEEEE------------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 93 --SIMYE------------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 93 --~~~~~------------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
..+|+ .+.+. +|...+.++.|. ...+ +|++.|.+.-+||+++ ++.+..+.+|.+.|.
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~-gHtgylScC~f~dD~~i--lT~SGD~TCalWDie~-----g~~~~~f~GH~gDV~ 190 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELA-GHTGYLSCCRFLDDNHI--LTGSGDMTCALWDIET-----GQQTQVFHGHTGDVM 190 (343)
T ss_pred ceeEEEecccccccccceeeeeec-CccceeEEEEEcCCCce--EecCCCceEEEEEccc-----ceEEEEecCCcccEE
Confidence 47777 34466 899999999998 7777 9999999999999988 788999999999999
Q ss_pred EEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 158 RVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 158 ~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
+++++| +++.+++|+.|++.++||++.+...+.++.++
T Consensus 191 slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghe 229 (343)
T KOG0286|consen 191 SLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHE 229 (343)
T ss_pred EEecCCCCCCeEEecccccceeeeeccCcceeEeecccc
Confidence 999999 99999999999999999999999999888776
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=171.78 Aligned_cols=165 Identities=16% Similarity=0.117 Sum_probs=144.3
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 92 (197)
.|++...+.+|.+.|.|+++.|. .++|+||+.|++++|||+.+++.. .++.+ ...+..+++++-..+++++
T Consensus 140 pwKl~rVi~gHlgWVr~vavdP~--n~wf~tgs~DrtikIwDlatg~Lk------ltltGhi~~vr~vavS~rHpYlFs~ 211 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVRSVAVDPG--NEWFATGSADRTIKIWDLATGQLK------LTLTGHIETVRGVAVSKRHPYLFSA 211 (460)
T ss_pred cceehhhhhhccceEEEEeeCCC--ceeEEecCCCceeEEEEcccCeEE------EeecchhheeeeeeecccCceEEEe
Confidence 46677778999999999999998 899999999999999999998643 33332 5678999999999998876
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
++.|| ++.+. +|-+.|.+++.+|..-+|++|++|..+|+||+++ ...+..+.+|..+|.++.+
T Consensus 212 gedk~VKCwDLe~nkvIR~Yh-GHlS~V~~L~lhPTldvl~t~grDst~RvWDiRt-----r~~V~~l~GH~~~V~~V~~ 285 (460)
T KOG0285|consen 212 GEDKQVKCWDLEYNKVIRHYH-GHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT-----RASVHVLSGHTNPVASVMC 285 (460)
T ss_pred cCCCeeEEEechhhhhHHHhc-cccceeEEEeccccceeEEecCCcceEEEeeecc-----cceEEEecCCCCcceeEEe
Confidence 79999 77788 9999999999997766669999999999999998 6788999999999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.|....+++||.|++|++||++.++....+-
T Consensus 286 ~~~dpqvit~S~D~tvrlWDl~agkt~~tlt 316 (460)
T KOG0285|consen 286 QPTDPQVITGSHDSTVRLWDLRAGKTMITLT 316 (460)
T ss_pred ecCCCceEEecCCceEEEeeeccCceeEeee
Confidence 9977789999999999999999887655443
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=172.21 Aligned_cols=179 Identities=20% Similarity=0.311 Sum_probs=148.9
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc------------
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH------------ 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~------------ 69 (197)
+..+|.+|+|+... +|..|.+||.++.|+.. |++|++++.|+++.+||..++...+++.+..
T Consensus 253 G~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~--G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~ 330 (524)
T KOG0273|consen 253 GSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKK--GTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND 330 (524)
T ss_pred eecCcEEEEEecCchhhhhhhccCCceEEEEEcCC--CCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCc
Confidence 46788999998764 57889999999999998 9999999999999999997765433332211
Q ss_pred -----------------------eec-cCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEE
Q psy13207 70 -----------------------EVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAY 114 (197)
Q Consensus 70 -----------------------~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~ 114 (197)
++. +...|.++.|+|.+..|+++ +++|. .+.+. .|...|..+.|
T Consensus 331 ~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~-~Hskei~t~~w 409 (524)
T KOG0273|consen 331 EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQ-AHSKEIYTIKW 409 (524)
T ss_pred eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhh-hhccceeeEee
Confidence 111 25678899999999998776 79999 66777 89999999999
Q ss_pred cC---------CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 115 DY---------YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 115 ~~---------~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+| ..+.+++++.|++|++||+.. +.++..+..|..+|++++|+|+|+|+|+|+.||.|.+|+.+++
T Consensus 410 sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~-----gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~ 484 (524)
T KOG0273|consen 410 SPTGPVTSNPNMNLMLASASFDSTVKLWDVES-----GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG 484 (524)
T ss_pred cCCCCccCCCcCCceEEEeecCCeEEEEEccC-----CceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch
Confidence 82 234559999999999999976 7889999999999999999999999999999999999999988
Q ss_pred cchhhhh
Q psy13207 186 RKKKKEE 192 (197)
Q Consensus 186 ~~~~~~~ 192 (197)
+.++.+.
T Consensus 485 ~l~~s~~ 491 (524)
T KOG0273|consen 485 KLVKSYQ 491 (524)
T ss_pred heeEeec
Confidence 7766543
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=157.23 Aligned_cols=169 Identities=25% Similarity=0.446 Sum_probs=143.9
Q ss_pred cccccccceeeee--------eee-cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CC
Q psy13207 6 LQSEKCLNQWTRR--------SNL-VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~--------~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~ 75 (197)
...|+.+|+|+.. ..+ .+|...|..++|+|. |++|+++|.|.++.||.-..+ .|.....+++ .+
T Consensus 33 cg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~--g~~La~aSFD~t~~Iw~k~~~----efecv~~lEGHEn 106 (312)
T KOG0645|consen 33 CGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPH--GRYLASASFDATVVIWKKEDG----EFECVATLEGHEN 106 (312)
T ss_pred ecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCC--CcEEEEeeccceEEEeecCCC----ceeEEeeeecccc
Confidence 4567888888766 223 379999999999999 999999999999999987654 3566777776 78
Q ss_pred CeeeEEEccCCCcccce-----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccc
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
.|.|++|+++|.+||++ +.+|+ ...++ .|...|..+.|+|..=+|++++.|++|++|+.... -
T Consensus 107 EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~-~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~d--d 183 (312)
T KOG0645|consen 107 EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQ-EHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDD--D 183 (312)
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeec-cccccccEEEEcCCcceeEEeccCCeEEEEeecCC--C
Confidence 99999999999999987 68888 56677 89999999999974444499999999999987531 3
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+..++..+.+|...|++++|+|.|..|++++.|++++||...
T Consensus 184 dW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 184 DWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred CeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 368899999999999999999999999999999999999843
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=173.61 Aligned_cols=178 Identities=12% Similarity=0.160 Sum_probs=149.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+...|+..+|+.. ..+++|.++|.++.|+++ +.+++||+.+|.|++|+.+..... .+. -.+...|+++
T Consensus 114 gs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~--g~wmiSgD~gG~iKyWqpnmnnVk-~~~----ahh~eaIRdl 186 (464)
T KOG0284|consen 114 GSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHN--GTWMISGDKGGMIKYWQPNMNNVK-IIQ----AHHAEAIRDL 186 (464)
T ss_pred ecccccEEEecCceeeHHHHhhhhcccceeEEEccC--CCEEEEcCCCceEEecccchhhhH-Hhh----Hhhhhhhhee
Confidence 3556777788753 347899999999999999 999999999999999998754321 111 1115789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+|+|....|+++ ++||| ...+. +|.-.|.+++|+|..-++++++.|..|++||.++ +.++.++
T Consensus 187 afSpnDskF~t~SdDg~ikiWdf~~~kee~vL~-GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS-----g~cl~tl 260 (464)
T KOG0284|consen 187 AFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLR-GHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS-----GSCLATL 260 (464)
T ss_pred ccCCCCceeEEecCCCeEEEEeccCCchhheec-cCCCCcceeccCCccceeEEccCCceeEeecCCC-----cchhhhh
Confidence 999987777665 89999 44556 9999999999996665569999999999999988 8899999
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
.+|+..|..+.|+|++++|+++|.|..++++|+++.++...+..|+.
T Consensus 261 h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkk 307 (464)
T KOG0284|consen 261 HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKK 307 (464)
T ss_pred hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchh
Confidence 99999999999999999999999999999999998888777776654
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-26 Score=154.69 Aligned_cols=166 Identities=20% Similarity=0.334 Sum_probs=138.1
Q ss_pred eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec--cCCCeeeEEEccCCCcccce--
Q psy13207 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA--CPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 17 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 92 (197)
..+.+.+|.+++..++|+|. .|..||||+.|+.|+||++..+. .+.....+. ++..|.+++|+|.|++|+++
T Consensus 6 ~~~~~~gh~~r~W~~awhp~-~g~ilAscg~Dk~vriw~~~~~~---s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPG-KGVILASCGTDKAVRIWSTSSGD---SWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eEEeecCCCCcEEEEEeccC-CceEEEeecCCceEEEEecCCCC---cEEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 45678999999999999994 36799999999999999998532 233333332 37899999999999998776
Q ss_pred ---eEEEE--------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 ---SIMYE--------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 ---~~~~~--------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
.-+|. +..+. +|...|.+++|+ +++| |+|++|+.|-+|..... -+.++...++.|.+.|..+
T Consensus 82 D~t~~Iw~k~~~efecv~~lE-GHEnEVK~Vaws~sG~~L--ATCSRDKSVWiWe~ded--dEfec~aVL~~HtqDVK~V 156 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLE-GHENEVKCVAWSASGNYL--ATCSRDKSVWIWEIDED--DEFECIAVLQEHTQDVKHV 156 (312)
T ss_pred cceEEEeecCCCceeEEeeee-ccccceeEEEEcCCCCEE--EEeeCCCeEEEEEecCC--CcEEEEeeeccccccccEE
Confidence 57777 77788 999999999999 7777 99999999999998643 2367888899999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.|+|...+|+++|+|.+|++|+-.....|...
T Consensus 157 ~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~ 188 (312)
T KOG0645|consen 157 IWHPTEDLLFSCSYDNTIKVYRDEDDDDWECV 188 (312)
T ss_pred EEcCCcceeEEeccCCeEEEEeecCCCCeeEE
Confidence 99999999999999999999987655555443
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-26 Score=172.97 Aligned_cols=185 Identities=17% Similarity=0.272 Sum_probs=155.1
Q ss_pred Ccccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc-eec--cce-e
Q psy13207 5 PLQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ-WCL--QHE-V 71 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~-~~~--~~~-~ 71 (197)
++.+|+++++|++.. ...+|+..|.+++++.. ...+|+++|.|+++++|++...+.... ..+ ... .
T Consensus 382 t~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~-~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~ 460 (775)
T KOG0319|consen 382 TGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKL-GASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTER 460 (775)
T ss_pred EecCCceEEEEEecCCcchhhhhhhhcccccccceeeeccc-CccEEEEecCCceEEEecCCCcccccccceehhhHHHH
Confidence 357899999998732 24689999999999774 257899999999999999987332221 111 111 1
Q ss_pred ccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc
Q psy13207 72 ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR 140 (197)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~ 140 (197)
.++..|.|++.+|+...++++ .++|+ +.++. +|...+.++.|++..-.++|+|.|++|++|.+.+
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLs-GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~--- 536 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLS-GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST--- 536 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCceEEEEee-CCccceEEEEeccccceeEeccCCceEEEEEecc---
Confidence 237889999999999999988 59999 77788 9999999999995433339999999999999977
Q ss_pred cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 141 FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 141 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
..++..+.||...|..+.|-.+|+.|++++.||-+++|++++..+...+..|++
T Consensus 537 --fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~D 590 (775)
T KOG0319|consen 537 --FSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHND 590 (775)
T ss_pred --ceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccc
Confidence 789999999999999999999999999999999999999999999999998875
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=161.27 Aligned_cols=174 Identities=20% Similarity=0.258 Sum_probs=148.7
Q ss_pred ccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
++|-++++|+... .+.+|.-.|.++.|-|. |.++++++.|.+|++|++.++-.+.++... ..-+..+
T Consensus 169 SsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~--gd~ilS~srD~tik~We~~tg~cv~t~~~h-----~ewvr~v 241 (406)
T KOG0295|consen 169 SSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPL--GDHILSCSRDNTIKAWECDTGYCVKTFPGH-----SEWVRMV 241 (406)
T ss_pred CCccchhheeHHHHHHHHHHhcCcccceeeEEEEec--CCeeeecccccceeEEecccceeEEeccCc-----hHhEEEE
Confidence 4555689998775 35689999999999998 999999999999999999998766554422 4578899
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc------------C-----CCeEEEEeeCCCeEEE
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD------------Y-----YGLRMATCSSDQNIKV 132 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~------------~-----~~~~~~s~~~d~~i~~ 132 (197)
..+.||..++++ +++|- ...+. .|.-.|.+++|. | +.+ .+++.|++|++
T Consensus 242 ~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR-~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l--~s~SrDktIk~ 318 (406)
T KOG0295|consen 242 RVNQDGTIIASCSNDQTLRVWVVATKQCKAELR-EHEHPVECIAWAPESSYPSISEATGSTNGGQVL--GSGSRDKTIKI 318 (406)
T ss_pred EecCCeeEEEecCCCceEEEEEeccchhhhhhh-ccccceEEEEecccccCcchhhccCCCCCccEE--EeecccceEEE
Confidence 999999999877 79998 34455 788999999986 2 244 89999999999
Q ss_pred EEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
||+.+ +.++.++.+|..+|..++|+|.|+||+++.+|+++++||+++.++.+.++.++
T Consensus 319 wdv~t-----g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~ 376 (406)
T KOG0295|consen 319 WDVST-----GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHE 376 (406)
T ss_pred EeccC-----CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCc
Confidence 99988 89999999999999999999999999999999999999999999887776543
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=153.20 Aligned_cols=174 Identities=11% Similarity=0.210 Sum_probs=138.1
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++..|+++|+|++.. .|.+|..-|.+++|+|+ ...++||+.|.+|++|+...... ++.....+ ..-|.|
T Consensus 80 S~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~d--n~qivSGSrDkTiklwnt~g~ck---~t~~~~~~-~~WVsc 153 (315)
T KOG0279|consen 80 SASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTD--NRQIVSGSRDKTIKLWNTLGVCK---YTIHEDSH-REWVSC 153 (315)
T ss_pred eccccceEEEEEecCCcEEEEEEecCCceEEEEecCC--CceeecCCCcceeeeeeecccEE---EEEecCCC-cCcEEE
Confidence 357899999999874 58899999999999999 88999999999999999876532 12221111 567999
Q ss_pred EEEccCC--Ccccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSF--SRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~--~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+.|+|.. .+++.+ +++|| ...+. +|...++.++++|+.-++++|+.||.+.+||++. .+.+
T Consensus 154 vrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~-gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~-----~k~l 227 (315)
T KOG0279|consen 154 VRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFI-GHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE-----GKNL 227 (315)
T ss_pred EEEcCCCCCcEEEEccCCceEEEEccCCcchhhccc-cccccEEEEEECCCCCEEecCCCCceEEEEEccC-----Ccee
Confidence 9999985 445443 89999 44556 8999999999996666669999999999999976 5555
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
..+ .|...|.+++|+|+.-.|+ ...+..|+|||+..+..+..+.
T Consensus 228 ysl-~a~~~v~sl~fspnrywL~-~at~~sIkIwdl~~~~~v~~l~ 271 (315)
T KOG0279|consen 228 YSL-EAFDIVNSLCFSPNRYWLC-AATATSIKIWDLESKAVVEELK 271 (315)
T ss_pred Eec-cCCCeEeeEEecCCceeEe-eccCCceEEEeccchhhhhhcc
Confidence 555 4688999999999865554 4456789999999887776654
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-25 Score=168.80 Aligned_cols=164 Identities=21% Similarity=0.341 Sum_probs=139.3
Q ss_pred ccceeeeeeeecCC-CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCeeeEEEccCCCc
Q psy13207 11 CLNQWTRRSNLVDS-RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLASCLTWNHSFSR 88 (197)
Q Consensus 11 ~~~~w~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (197)
..+.|.+...+..| ...|.++.|+|+ |..+++++.|+.+++|+....+. .....+ .+...|..++|+|++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~sv~~~~fs~~--g~~l~~~~~~~~i~~~~~~~~~~----~~~~~l~~h~~~v~~~~fs~d~~~ 217 (456)
T KOG0266|consen 144 SSRVFSLEQTLAGHECPSVTCVDFSPD--GRALAAASSDGLIRIWKLEGIKS----NLLRELSGHTRGVSDVAFSPDGSY 217 (456)
T ss_pred ccccceeeeeecccccCceEEEEEcCC--CCeEEEccCCCcEEEeecccccc----hhhccccccccceeeeEECCCCcE
Confidence 45666776666665 788999999999 99999999999999999965541 112222 23678999999999998
Q ss_pred ccce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecE
Q psy13207 89 FNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV 156 (197)
Q Consensus 89 ~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v 156 (197)
++++ +++|| ++++. +|...|++++|++..-++++|+.|++|++||+++ ++++..+.+|.+.|
T Consensus 218 l~s~s~D~tiriwd~~~~~~~~~~l~-gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-----~~~~~~l~~hs~~i 291 (456)
T KOG0266|consen 218 LLSGSDDKTLRIWDLKDDGRNLKTLK-GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-----GECVRKLKGHSDGI 291 (456)
T ss_pred EEEecCCceEEEeeccCCCeEEEEec-CCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-----CeEEEeeeccCCce
Confidence 8776 89999 67788 9999999999993333339999999999999987 78999999999999
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 157 WRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 157 ~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
.+++|++++++|++++.|+.|++||+.++.
T Consensus 292 s~~~f~~d~~~l~s~s~d~~i~vwd~~~~~ 321 (456)
T KOG0266|consen 292 SGLAFSPDGNLLVSASYDGTIRVWDLETGS 321 (456)
T ss_pred EEEEECCCCCEEEEcCCCccEEEEECCCCc
Confidence 999999999999999999999999999877
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-25 Score=168.35 Aligned_cols=178 Identities=20% Similarity=0.302 Sum_probs=141.8
Q ss_pred ccccccceeee-------eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-ccccceeccceeccCCCee
Q psy13207 7 QSEKCLNQWTR-------RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-MNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~-------~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~ 78 (197)
..++.++.|.. ..++.+|...|.+++|+|+ +.++++++.|++|+|||+... ..++.+. .+...++
T Consensus 178 ~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d--~~~l~s~s~D~tiriwd~~~~~~~~~~l~-----gH~~~v~ 250 (456)
T KOG0266|consen 178 SSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPD--GSYLLSGSDDKTLRIWDLKDDGRNLKTLK-----GHSTYVT 250 (456)
T ss_pred cCCCcEEEeecccccchhhccccccccceeeeEECCC--CcEEEEecCCceEEEeeccCCCeEEEEec-----CCCCceE
Confidence 45677778876 3456789999999999999 999999999999999999433 3332222 2267899
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
+++|+|+++.++++ +++|+ +..+. +|...|.+++|+++.-.|++++.|+.|++||+.+.... ++.
T Consensus 251 ~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~-~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~---~~~ 326 (456)
T KOG0266|consen 251 SVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLK-GHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKL---CLK 326 (456)
T ss_pred EEEecCCCCEEEEecCCCcEEEEeccCCeEEEeee-ccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCcee---eee
Confidence 99999999777665 89999 66777 99999999999944333499999999999999873111 455
Q ss_pred eecCceec--EEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 148 NFEDHYCT--VWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 148 ~~~~h~~~--v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
.+.++... ++++.|+|++.++++++.|+.+++||++......++..+.
T Consensus 327 ~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~ 376 (456)
T KOG0266|consen 327 LLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHS 376 (456)
T ss_pred cccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccC
Confidence 66666544 9999999999999999999999999999887666655443
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=150.12 Aligned_cols=180 Identities=16% Similarity=0.204 Sum_probs=147.9
Q ss_pred CcccccccceeeeeeeecC-----CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCee
Q psy13207 5 PLQSEKCLNQWTRRSNLVD-----SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~~~~~-----h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (197)
+...|+.+-+|+-.++.+. -...|..++|+|. |+++|+|+-|+...||++.+.+..........+.+ ...+.
T Consensus 72 SaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPS--g~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylS 149 (343)
T KOG0286|consen 72 SASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPS--GNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLS 149 (343)
T ss_pred eeccCCeEEEEEcccccceeEEecCceeEEEEEECCC--CCeEEecCcCceeEEEecccccccccceeeeeecCccceeE
Confidence 3567888889987655443 3578999999999 99999999999999999986543333333344444 67789
Q ss_pred eEEEccCCCcccce----eEEEE------eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI----SIMYE------AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
|+.|-+++..+... .-+|| +..+. +|...|.++.++| +.-.|++|+.|+..++||++. ..+++
T Consensus 150 cC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~-GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~-----~~c~q 223 (343)
T KOG0286|consen 150 CCRFLDDNHILTGSGDMTCALWDIETGQQTQVFH-GHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS-----GQCVQ 223 (343)
T ss_pred EEEEcCCCceEecCCCceEEEEEcccceEEEEec-CCcccEEEEecCCCCCCeEEecccccceeeeeccC-----cceeE
Confidence 99999977766433 78999 66788 9999999999994 333339999999999999987 78999
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.|.+|...|++++|.|+|.-+++|+.|+++++||++...++..++
T Consensus 224 tF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys 268 (343)
T KOG0286|consen 224 TFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYS 268 (343)
T ss_pred eecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeec
Confidence 999999999999999999999999999999999999987776655
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=159.10 Aligned_cols=172 Identities=17% Similarity=0.268 Sum_probs=139.1
Q ss_pred CCcccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 4 SPLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
.++.+|.++++|+... .|.||++.|.|+.|. .+.+++|+.|.+|++||.++++.+..+. .+-..|.
T Consensus 211 VSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd----~rviisGSSDsTvrvWDv~tge~l~tli-----hHceaVL 281 (499)
T KOG0281|consen 211 VSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD----ERVIVSGSSDSTVRVWDVNTGEPLNTLI-----HHCEAVL 281 (499)
T ss_pred hcccccCceEEeccccHHHHHhhhcCCCcEEeeecc----ceEEEecCCCceEEEEeccCCchhhHHh-----hhcceeE
Confidence 4678899999999764 588999999999985 4489999999999999999998765432 1234566
Q ss_pred eEEEccCCCcccc-----eeEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccccee
Q psy13207 79 CLTWNHSFSRFNS-----ISIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 79 ~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
.+.|+. .++++ ++.+|+ .+.+. +|...|+.+.|+..++ ++++.|.+|++|++.+ .+
T Consensus 282 hlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLv-GHrAaVNvVdfd~kyI--VsASgDRTikvW~~st-----~e 351 (499)
T KOG0281|consen 282 HLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDFDDKYI--VSASGDRTIKVWSTST-----CE 351 (499)
T ss_pred EEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHh-hhhhheeeeccccceE--EEecCCceEEEEeccc-----ee
Confidence 666643 22332 278888 33445 8999999999997788 9999999999999977 78
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
.+..+.+|...|.|+.+ .|+++++||.|.+|++||+..+.+...++.|||
T Consensus 352 fvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe 401 (499)
T KOG0281|consen 352 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 401 (499)
T ss_pred eehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHH
Confidence 88899999999888887 588999999999999999999999999888886
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-26 Score=162.96 Aligned_cols=175 Identities=17% Similarity=0.290 Sum_probs=145.9
Q ss_pred Ccccccccceeeeee----eecCC-CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCee
Q psy13207 5 PLQSEKCLNQWTRRS----NLVDS-RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~----~~~~h-~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (197)
+++.++.++.|+... .+.+| ...|++++|+|. ...|+|||.||+|+|||....+.... +.+ .-.+.
T Consensus 155 SgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpn--DskF~t~SdDg~ikiWdf~~~kee~v------L~GHgwdVk 226 (464)
T KOG0284|consen 155 SGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPN--DSKFLTCSDDGTIKIWDFRMPKEERV------LRGHGWDVK 226 (464)
T ss_pred EcCCCceEEecccchhhhHHhhHhhhhhhheeccCCC--CceeEEecCCCeEEEEeccCCchhhe------eccCCCCcc
Confidence 578899999998753 34454 489999999997 88999999999999999987654322 222 67899
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
++.|+|....++++ +++|| +.++. .|...|..+.|+++.-+|+|++.|..++++|+++ .+.++
T Consensus 227 svdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh-~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~-----mkEl~ 300 (464)
T KOG0284|consen 227 SVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLH-GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT-----MKELF 300 (464)
T ss_pred eeccCCccceeEEccCCceeEeecCCCcchhhhhh-hccceEEEEEEcCCCCeeEEccCCceEEEEehhH-----hHHHH
Confidence 99999999998877 79999 67777 8999999999994334449999999999999986 67788
Q ss_pred eecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 148 NFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
.+++|+..|+++.|+| ...+|.+|+.||.|..|.+...+....++.
T Consensus 301 ~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~ 347 (464)
T KOG0284|consen 301 TYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPP 347 (464)
T ss_pred HhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCc
Confidence 9999999999999999 678999999999999999985555555443
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=163.70 Aligned_cols=172 Identities=16% Similarity=0.217 Sum_probs=146.6
Q ss_pred cccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeee
Q psy13207 6 LQSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (197)
+..|..+|+++. .+.|.+|.+.|.|++.+|. .-+++|+|.|-+|++||.... |...+++++ .-.|++
T Consensus 73 GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt--~P~vLtsSDDm~iKlW~we~~-----wa~~qtfeGH~HyVMq 145 (794)
T KOG0276|consen 73 GSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPT--LPYVLTSSDDMTIKLWDWENE-----WACEQTFEGHEHYVMQ 145 (794)
T ss_pred ecCCceEEEEecccceeeEEeeccccceeeeeecCC--CCeEEecCCccEEEEeeccCc-----eeeeeEEcCcceEEEE
Confidence 456778888764 4579999999999999998 889999999999999998754 455666666 567999
Q ss_pred EEEccCC-Ccccce-----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 80 LTWNHSF-SRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 80 ~~~~~~~-~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
++|+|.. +.++++ +++|. ..++. +|...|+|+.|- ++.-+|+||+.|.++++||..+ ..+
T Consensus 146 v~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~-gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt-----k~C 219 (794)
T KOG0276|consen 146 VAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE-GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT-----KSC 219 (794)
T ss_pred EEecCCCccceeeeeccccEEEEEcCCCCCceeee-ccccCcceEEeccCCCcceEEecCCCceEEEeecch-----HHH
Confidence 9999965 455554 79999 66778 999999999998 6666669999999999999976 789
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.++.+|...|..+.|+|.-.++++||.||+++||+-.+.+...+
T Consensus 220 V~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~t 264 (794)
T KOG0276|consen 220 VQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKT 264 (794)
T ss_pred HHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhh
Confidence 999999999999999999999999999999999999887654443
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-25 Score=157.19 Aligned_cols=163 Identities=15% Similarity=0.250 Sum_probs=140.8
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce--ec-cCCCeeeEEEccCCCcccce-----eE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--VA-CPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
+..+-+.|..|+|+ |++|++|+.||.|.+||..+++..+.++.+.. +- .+.++.|+.|+.+...++++ ++
T Consensus 211 g~KSh~EcA~FSPD--gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPD--GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCC--CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEE
Confidence 45567889999999 99999999999999999999876554443322 22 27899999999999999887 89
Q ss_pred EEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 95 MYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 95 ~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
+|. ++.+..+|...|.++.|+ +..+ ++++.|.++++..+++ ++++.++++|...|+...|.++|.
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~Sqi--LS~sfD~tvRiHGlKS-----GK~LKEfrGHsSyvn~a~ft~dG~ 361 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQI--LSASFDQTVRIHGLKS-----GKCLKEFRGHSSYVNEATFTDDGH 361 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchh--hcccccceEEEecccc-----chhHHHhcCccccccceEEcCCCC
Confidence 999 555655899999999999 5566 8999999999999987 889999999999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
++++++.||+|++|+.++.++..++...
T Consensus 362 ~iisaSsDgtvkvW~~KtteC~~Tfk~~ 389 (508)
T KOG0275|consen 362 HIISASSDGTVKVWHGKTTECLSTFKPL 389 (508)
T ss_pred eEEEecCCccEEEecCcchhhhhhccCC
Confidence 9999999999999999998887776543
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=164.00 Aligned_cols=173 Identities=18% Similarity=0.276 Sum_probs=142.6
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.|++|+.. .+|..|++.|+++.|+.. |+.+++.|-||+|+.||+..-++-++++... +....|+
T Consensus 368 G~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~--g~~llssSLDGtVRAwDlkRYrNfRTft~P~----p~Qfscv 441 (893)
T KOG0291|consen 368 GAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR--GNVLLSSSLDGTVRAWDLKRYRNFRTFTSPE----PIQFSCV 441 (893)
T ss_pred ccCCCcEEEEeccCceEEEEeccCCCceEEEEEEec--CCEEEEeecCCeEEeeeecccceeeeecCCC----ceeeeEE
Confidence 5789999999976 478999999999999998 9999999999999999998877665554332 4467899
Q ss_pred EEccCCCcccce------eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 81 TWNHSFSRFNSI------SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 81 ~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+-.|.|..+.++ |.+|+ +..+. +|.++|.+++|+ ++.+ ++++.|++||+||+-.. ...+
T Consensus 442 avD~sGelV~AG~~d~F~IfvWS~qTGqllDiLs-GHEgPVs~l~f~~~~~~L--aS~SWDkTVRiW~if~s----~~~v 514 (893)
T KOG0291|consen 442 AVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILS-GHEGPVSGLSFSPDGSLL--ASGSWDKTVRIWDIFSS----SGTV 514 (893)
T ss_pred EEcCCCCEEEeeccceEEEEEEEeecCeeeehhc-CCCCcceeeEEccccCeE--EeccccceEEEEEeecc----Ccee
Confidence 999999987665 79999 55666 999999999999 5555 99999999999998431 1223
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.++ .+...+..++|+|+|+.|++++.||.|.+||.+...+...++
T Consensus 515 Etl-~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Id 559 (893)
T KOG0291|consen 515 ETL-EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSID 559 (893)
T ss_pred eeE-eeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeecccc
Confidence 333 356688999999999999999999999999998877665544
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=156.60 Aligned_cols=168 Identities=19% Similarity=0.266 Sum_probs=130.9
Q ss_pred Ccccccccceeee--------eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 5 PLQSEKCLNQWTR--------RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 5 ~~~~~~~~~~w~~--------~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
++.+|.+.-+|.+ .+++.+|..+|..+.|+|+ .++|++|+.|..+++||+.++.....+... ....
T Consensus 241 saSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPD--dryLlaCg~~e~~~lwDv~tgd~~~~y~~~----~~~S 314 (519)
T KOG0293|consen 241 SASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPD--DRYLLACGFDEVLSLWDVDTGDLRHLYPSG----LGFS 314 (519)
T ss_pred eccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCC--CCeEEecCchHheeeccCCcchhhhhcccC----cCCC
Confidence 4567777777865 3578899999999999999 999999999999999999998766544422 1467
Q ss_pred eeeEEEccCCCcccce-----e----------------------------------------------------------
Q psy13207 77 ASCLTWNHSFSRFNSI-----S---------------------------------------------------------- 93 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~---------------------------------------------------------- 93 (197)
+.+++|.||+..++++ +
T Consensus 315 ~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise 394 (519)
T KOG0293|consen 315 VSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISE 394 (519)
T ss_pred cceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccc
Confidence 8888899988887665 1
Q ss_pred -------------------------EEEE------eeEecccCCCc--eeEEEEc-CCCeEEEEeeCCCeEEEEEccCCc
Q psy13207 94 -------------------------IMYE------AHSINAEHKDL--IHDVAYD-YYGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 94 -------------------------~~~~------~~~~~~~~~~~--i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
.+|| +..+. +|... +..-+|- .+.-.+++|++|+.|++|+.++
T Consensus 395 ~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~-Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s-- 471 (519)
T KOG0293|consen 395 EQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYF-GHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS-- 471 (519)
T ss_pred cCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhh-cccccceEEEeccCCCCcceEEecCCCceEEEEEccC--
Confidence 3444 23333 55443 3334555 3322339999999999999977
Q ss_pred ccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCC
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~ 184 (197)
++++..+.||...|++++|+| +..++|++|+||+|+||....
T Consensus 472 ---gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 472 ---GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred ---CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 899999999999999999999 568999999999999998764
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=147.76 Aligned_cols=176 Identities=14% Similarity=0.181 Sum_probs=142.2
Q ss_pred ccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..||++++|+.. ..++.|...|.++.|++.. ++.++++|.|++|++|+...++.++++.- +...|...
T Consensus 80 ~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~-r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g-----h~~~Iy~a 153 (311)
T KOG0277|consen 80 SGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVR-RRIFLTSSWDGTIKLWDPNRPNSVQTFNG-----HNSCIYQA 153 (311)
T ss_pred ecCceEEEeccCCCCcchhHHHhhhhheEEecccccc-ceeEEeeccCCceEeecCCCCcceEeecC-----CccEEEEE
Confidence 468899999854 3478999999999999963 67788889999999999988877665432 25678999
Q ss_pred EEccCCCccc-ce-----eEEEE------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 81 TWNHSFSRFN-SI-----SIMYE------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 81 ~~~~~~~~~~-~~-----~~~~~------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
.|+|....++ ++ +++|| ...++ .|..+|.++.|+ ++.+ +||+.|+.|+.||+++- ..+
T Consensus 154 ~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~-ah~~Eil~cdw~ky~~~vl--~Tg~vd~~vr~wDir~~----r~p 226 (311)
T KOG0277|consen 154 AFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIE-AHNSEILCCDWSKYNHNVL--ATGGVDNLVRGWDIRNL----RTP 226 (311)
T ss_pred ecCCCCCCeEEEccCCceEEEEEecCCCceeEEE-eccceeEeecccccCCcEE--EecCCCceEEEEehhhc----ccc
Confidence 9999766543 32 79999 22366 899999999999 5555 99999999999999863 467
Q ss_pred eeeecCceecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCc-chhhhhhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKR-KKKKEEEEE 195 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~ 195 (197)
+.++.+|.-.|..++|||. ..+||+++.|-+++|||...+. .+++.+.|.
T Consensus 227 l~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~Ht 278 (311)
T KOG0277|consen 227 LFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHT 278 (311)
T ss_pred ceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccc
Confidence 8889999999999999995 5799999999999999998554 345544443
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=165.34 Aligned_cols=164 Identities=15% Similarity=0.238 Sum_probs=144.3
Q ss_pred Ccccccccceeeeee--------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce
Q psy13207 5 PLQSEKCLNQWTRRS--------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~--------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
+...|.++++|.+.. +...|...|+|++.+|+ ..++||||+|.+.+||++.... +...
T Consensus 429 svS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n--dkLiAT~SqDktaKiW~le~~~------l~~v 500 (775)
T KOG0319|consen 429 SVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN--DKLIATGSQDKTAKIWDLEQLR------LLGV 500 (775)
T ss_pred EecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC--CceEEecccccceeeecccCce------EEEE
Confidence 357889999998765 23579999999999998 9999999999999999998543 3455
Q ss_pred ecc-CCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEcc
Q psy13207 71 VAC-PTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 71 ~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~ 136 (197)
+.+ ...+.|+.|+|....++++ ++||. ++++. +|...|....|- +..+ ++|+.||.|++|+++
T Consensus 501 LsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e-GH~~aVlra~F~~~~~ql--iS~~adGliKlWnik 577 (775)
T KOG0319|consen 501 LSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE-GHTSAVLRASFIRNGKQL--ISAGADGLIKLWNIK 577 (775)
T ss_pred eeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeec-CccceeEeeeeeeCCcEE--EeccCCCcEEEEecc
Confidence 554 7899999999999998765 89999 78888 999999999998 6667 999999999999998
Q ss_pred CCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 137 MGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
+ .+++..+.+|++.|++++.+|...++++|+.||.|.+|.=.+
T Consensus 578 t-----~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 578 T-----NECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred c-----hhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 7 789999999999999999999999999999999999996444
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=141.34 Aligned_cols=169 Identities=15% Similarity=0.198 Sum_probs=135.1
Q ss_pred ccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 9 EKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 9 ~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
...+|+|++. .++.+|+..|.++.|..+ |+.++|||+||+++|||++.....+ .+....+|.++.
T Consensus 60 ~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~d--grWMyTgseDgt~kIWdlR~~~~qR------~~~~~spVn~vv 131 (311)
T KOG0315|consen 60 NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCD--GRWMYTGSEDGTVKIWDLRSLSCQR------NYQHNSPVNTVV 131 (311)
T ss_pred CCeeEEEEccCCCCCceeEEeccCCceEEEEEeec--CeEEEecCCCceEEEEeccCcccch------hccCCCCcceEE
Confidence 4567888765 368899999999999998 9999999999999999999854333 333367999999
Q ss_pred EccCCCcccce-----eEEEEeeE------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc-ccceeeeeee
Q psy13207 82 WNHSFSRFNSI-----SIMYEAHS------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT-RFDIETIGNF 149 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~-~~~~~~~~~~ 149 (197)
.+|+...|.++ +++||+.. +.+.....|.++...++.-.++.+...|..++|++-+.. ....+++..+
T Consensus 132 lhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~ 211 (311)
T KOG0315|consen 132 LHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKF 211 (311)
T ss_pred ecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhhe
Confidence 99998887665 89999332 111334567888777444444999999999999986521 2234677788
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+.|...+..+.+|||+++||++|.|.+++||+....
T Consensus 212 ~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 212 QAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred ecccceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence 999999999999999999999999999999998875
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-25 Score=160.47 Aligned_cols=182 Identities=17% Similarity=0.327 Sum_probs=142.3
Q ss_pred Ccccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 5 PLQSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
++.-|+.+++|++.. ++.+|+.+|.+++|+++ |..|.|+|.|+.|++||+.+++.+..+.. ...+.
T Consensus 232 S~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~--g~~fLS~sfD~~lKlwDtETG~~~~~f~~------~~~~~ 303 (503)
T KOG0282|consen 232 SGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNC--GTSFLSASFDRFLKLWDTETGQVLSRFHL------DKVPT 303 (503)
T ss_pred ecCCCceEEEEEEecCcceehhhhcchhhhhhhhcccc--CCeeeeeecceeeeeeccccceEEEEEec------CCCce
Confidence 356789999998764 68899999999999998 99999999999999999999987655543 56789
Q ss_pred eEEEccCCC-cccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccc-----
Q psy13207 79 CLTWNHSFS-RFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF----- 141 (197)
Q Consensus 79 ~~~~~~~~~-~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~----- 141 (197)
|+.|+|++. .++++ |+.|| ++.+. .|-..|..+.|-++.-+|++.++|+.+++|+.+.....
T Consensus 304 cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd-~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~ 382 (503)
T KOG0282|consen 304 CVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYD-RHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIAD 382 (503)
T ss_pred eeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHH-hhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcc
Confidence 999999994 44444 79999 55555 78889999999844444499999999999987632110
Q ss_pred ------------------------------------ceeeeeeecCce--ecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 142 ------------------------------------DIETIGNFEDHY--CTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 142 ------------------------------------~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
....-..+.+|. +.-..+.|||||++|++|..||.+.+||.+
T Consensus 383 ~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwk 462 (503)
T KOG0282|consen 383 PEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWK 462 (503)
T ss_pred hhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeech
Confidence 000111123553 334678999999999999999999999999
Q ss_pred CCcchhhhhhhh
Q psy13207 184 KKRKKKKEEEEE 195 (197)
Q Consensus 184 ~~~~~~~~~~~~ 195 (197)
+-+.+.+++.++
T Consensus 463 t~kl~~~lkah~ 474 (503)
T KOG0282|consen 463 TTKLVSKLKAHD 474 (503)
T ss_pred hhhhhhccccCC
Confidence 988887777663
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=164.29 Aligned_cols=181 Identities=14% Similarity=0.202 Sum_probs=152.3
Q ss_pred CCcccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 4 SPLQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
.++..|-.++.|+.. .+|.||-+.|..+.|++. --.++|+|.|-+|+||+..+.+.+...+- +.-.|+
T Consensus 67 VSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHhe--yPWIlSASDDQTIrIWNwqsr~~iavltG-----HnHYVM 139 (1202)
T KOG0292|consen 67 VSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHE--YPWILSASDDQTIRIWNWQSRKCIAVLTG-----HNHYVM 139 (1202)
T ss_pred EecCCccEEEEEecccceehhhhccccceeEEeeccCC--CceEEEccCCCeEEEEeccCCceEEEEec-----CceEEE
Confidence 357788889999754 368899999999999998 88999999999999999998876644331 145689
Q ss_pred eEEEccCCCcccce-----eEEEE-----------------------------------eeEecccCCCceeEEEEcCCC
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE-----------------------------------AHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~-----------------------------------~~~~~~~~~~~i~~~~~~~~~ 118 (197)
|..|+|..+.++++ +++|| .+.+. +|...|+-++|+|..
T Consensus 140 cAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLE-GHDRGVNwaAfhpTl 218 (1202)
T KOG0292|consen 140 CAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLE-GHDRGVNWAAFHPTL 218 (1202)
T ss_pred eeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeec-ccccccceEEecCCc
Confidence 99999998887766 79999 33445 899999999999877
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
-++++|+.|..|++|.+... ..-.+-.+.+|.+.|.++-|+|...++++.|.|++|++||+.+.+.++++...+
T Consensus 219 pliVSG~DDRqVKlWrmnet---KaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrren 292 (1202)
T KOG0292|consen 219 PLIVSGADDRQVKLWRMNET---KAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRREN 292 (1202)
T ss_pred ceEEecCCcceeeEEEeccc---cceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccC
Confidence 77799999999999998652 234567788999999999999999999999999999999999988887775544
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-23 Score=152.81 Aligned_cols=160 Identities=22% Similarity=0.428 Sum_probs=130.7
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce------
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI------ 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 92 (197)
.+.+|..+++-.+|+|. |.++|+|...|+|+|||....+-+ +..+++. ..+|..|+|+.+++++++.
T Consensus 54 iYtEH~~~vtVAkySPs--G~yiASGD~sG~vRIWdtt~~~hi----LKnef~v~aG~I~Di~Wd~ds~RI~avGEGrer 127 (603)
T KOG0318|consen 54 IYTEHAHQVTVAKYSPS--GFYIASGDVSGKVRIWDTTQKEHI----LKNEFQVLAGPIKDISWDFDSKRIAAVGEGRER 127 (603)
T ss_pred eeccccceeEEEEeCCC--ceEEeecCCcCcEEEEeccCccee----eeeeeeecccccccceeCCCCcEEEEEecCccc
Confidence 36789999999999999 999999999999999998764321 2233333 6889999999999987543
Q ss_pred ---eEEEE-----------------------------------------------eeEecccCCCceeEEEEcCCCeEEE
Q psy13207 93 ---SIMYE-----------------------------------------------AHSINAEHKDLIHDVAYDYYGLRMA 122 (197)
Q Consensus 93 ---~~~~~-----------------------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~ 122 (197)
..+|| ...+. .|..-|+++.|+|+.-+|+
T Consensus 128 fg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r-~HskFV~~VRysPDG~~Fa 206 (603)
T KOG0318|consen 128 FGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFR-EHSKFVNCVRYSPDGSRFA 206 (603)
T ss_pred eeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeeccc-ccccceeeEEECCCCCeEE
Confidence 45555 22223 5788899999996666669
Q ss_pred EeeCCCeEEEEEccCCcccceeeeeeec---CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 123 TCSSDQNIKVTRDVMGTRFDIETIGNFE---DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 123 s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+.+.||++.+||-++ ++.+..+. +|.+.|++++|+||++.++++|.|.+++|||+.+.+..+++
T Consensus 207 t~gsDgki~iyDGkt-----ge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~ 273 (603)
T KOG0318|consen 207 TAGSDGKIYIYDGKT-----GEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTW 273 (603)
T ss_pred EecCCccEEEEcCCC-----ccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEe
Confidence 999999999999977 67777776 89999999999999999999999999999999987665544
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-23 Score=143.96 Aligned_cols=184 Identities=44% Similarity=0.754 Sum_probs=149.4
Q ss_pred ccccccceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec--------cCCCee
Q psy13207 7 QSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA--------CPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~--------~~~~~~ 78 (197)
..+..-+.|...+++...++.|+++.|.|...|-.||+++.||+++||+......+.+|++++.+. ...+..
T Consensus 94 ~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~ 173 (361)
T KOG2445|consen 94 SEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCF 173 (361)
T ss_pred ccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcce
Confidence 344455677788889999999999999997668899999999999999999998899999888877 477889
Q ss_pred eEEEccCCC---cccce----------eEEEE----------eeEecccCCCceeEEEEcC----CCeEEEEeeCCCeEE
Q psy13207 79 CLTWNHSFS---RFNSI----------SIMYE----------AHSINAEHKDLIHDVAYDY----YGLRMATCSSDQNIK 131 (197)
Q Consensus 79 ~~~~~~~~~---~~~~~----------~~~~~----------~~~~~~~~~~~i~~~~~~~----~~~~~~s~~~d~~i~ 131 (197)
|+.|+|... .++.+ ..||. +..+. +|..+|+.|+|.| .+-++++++.|| |+
T Consensus 174 CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~-d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~ 251 (361)
T KOG2445|consen 174 CVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELP-DHTDPIRDISWAPNIGRSYHLLAVATKDG-VR 251 (361)
T ss_pred EEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcC-CCCCcceeeeeccccCCceeeEEEeecCc-EE
Confidence 999997643 34443 46666 66677 8999999999992 223449999999 99
Q ss_pred EEEccC---------------CcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 132 VTRDVM---------------GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 132 ~~d~~~---------------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
||.++. ...++.+.+..+..|.+.|+.+.|+-.|..|++.+.||.|++|...-..+|++..
T Consensus 252 I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~s 327 (361)
T KOG2445|consen 252 IFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTS 327 (361)
T ss_pred EEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeee
Confidence 998873 1224456777889999999999999999999999999999999887666665543
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=157.52 Aligned_cols=174 Identities=15% Similarity=0.187 Sum_probs=150.5
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..|.+.+|+-.+ .+.-..-||.+..|-+. .+.+++|+.|..|++|+.++.+.+.++.- ++..+.+++.
T Consensus 33 ynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaR--knWiv~GsDD~~IrVfnynt~ekV~~FeA-----H~DyIR~iav 105 (794)
T KOG0276|consen 33 YNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIAR--KNWIVTGSDDMQIRVFNYNTGEKVKTFEA-----HSDYIRSIAV 105 (794)
T ss_pred ecCeeEEEecccceeeeeeeecccchhhheeeec--cceEEEecCCceEEEEecccceeeEEeec-----cccceeeeee
Confidence 467788887543 35556779999999998 89999999999999999999887665542 2678999999
Q ss_pred ccCCCcccce-----eEEEE-------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 83 NHSFSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 83 ~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
+|...++.++ +++|+ ..++. +|...|.+++|+ ++.+ ++++-|++|++|.+.+ ..+.+
T Consensus 106 HPt~P~vLtsSDDm~iKlW~we~~wa~~qtfe-GH~HyVMqv~fnPkD~ntF--aS~sLDrTVKVWslgs-----~~~nf 177 (794)
T KOG0276|consen 106 HPTLPYVLTSSDDMTIKLWDWENEWACEQTFE-GHEHYVMQVAFNPKDPNTF--ASASLDRTVKVWSLGS-----PHPNF 177 (794)
T ss_pred cCCCCeEEecCCccEEEEeeccCceeeeeEEc-CcceEEEEEEecCCCccce--eeeeccccEEEEEcCC-----CCCce
Confidence 9999998765 78888 77888 999999999999 6777 9999999999999976 67888
Q ss_pred eecCceecEEEEEEccC--CCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 148 NFEDHYCTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
++.+|...|+|+++-+- ..+|++|++|.++++||+.+..++++++.|-.
T Consensus 178 Tl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~ 228 (794)
T KOG0276|consen 178 TLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTN 228 (794)
T ss_pred eeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccc
Confidence 99999999999999874 46999999999999999999999999987753
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=157.93 Aligned_cols=165 Identities=18% Similarity=0.220 Sum_probs=133.8
Q ss_pred ccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.+-+++-.|+-+. ..++|...+++++++|| |+++|||+.||.|++||..++-+..++. ++...++.+.
T Consensus 327 ~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpD--gq~iaTG~eDgKVKvWn~~SgfC~vTFt-----eHts~Vt~v~ 399 (893)
T KOG0291|consen 327 SKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPD--GQLIATGAEDGKVKVWNTQSGFCFVTFT-----EHTSGVTAVQ 399 (893)
T ss_pred CccceEEEEEeeccceeeeccccccceeeEEECCC--CcEEEeccCCCcEEEEeccCceEEEEec-----cCCCceEEEE
Confidence 3456777777654 35689999999999999 9999999999999999999886655444 2367899999
Q ss_pred EccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCC-eEEEEEccCCcccceeeee
Q psy13207 82 WNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQ-NIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~-~i~~~d~~~~~~~~~~~~~ 147 (197)
|+..++.+.+. ++.|| .+++.........|++.. +..+ .+|+.|. .|.+|++.+ ++.+-
T Consensus 400 f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV--~AG~~d~F~IfvWS~qT-----GqllD 472 (893)
T KOG0291|consen 400 FTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELV--CAGAQDSFEIFVWSVQT-----GQLLD 472 (893)
T ss_pred EEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEE--EeeccceEEEEEEEeec-----Ceeee
Confidence 99999886554 89999 444443344456677776 4444 7777764 789999987 89999
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.+.||.++|.+++|+|.+..|+++|.|.+|++||+-..
T Consensus 473 iLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 473 ILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred hhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 99999999999999999999999999999999998543
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-23 Score=139.98 Aligned_cols=170 Identities=12% Similarity=0.128 Sum_probs=142.3
Q ss_pred ccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.+|.++..|-- ..++.+|+++|+|+..+-+ ...++||+.|.+++|||+.+++.+..+.. +.++..+.
T Consensus 29 aKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~--s~~liTGSAD~t~kLWDv~tGk~la~~k~------~~~Vk~~~ 100 (327)
T KOG0643|consen 29 AKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWD--SKHLITGSADQTAKLWDVETGKQLATWKT------NSPVKRVD 100 (327)
T ss_pred cCCCCceEEEecCCceeeeecCCCceEEEEEecCC--cceeeeccccceeEEEEcCCCcEEEEeec------CCeeEEEe
Confidence 56777777743 3578999999999999988 89999999999999999999988766654 55889999
Q ss_pred EccCCCcccce----------eEEEE-------------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEcc
Q psy13207 82 WNHSFSRFNSI----------SIMYE-------------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 82 ~~~~~~~~~~~----------~~~~~-------------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~ 136 (197)
|++.+++++.. +.+++ ...+. .+.+.++..-|. ++.+ ++|.+||.|..||.+
T Consensus 101 F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~-t~~skit~a~Wg~l~~~i--i~Ghe~G~is~~da~ 177 (327)
T KOG0643|consen 101 FSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIP-TPDSKITSALWGPLGETI--IAGHEDGSISIYDAR 177 (327)
T ss_pred eccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEec-CCccceeeeeecccCCEE--EEecCCCcEEEEEcc
Confidence 99999886433 67777 33444 567888999998 7777 999999999999998
Q ss_pred CCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 137 MGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
++ .+.+.....|...|+.+.++||..+++++|.|.+-++||+.+....+++
T Consensus 178 ~g----~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty 228 (327)
T KOG0643|consen 178 TG----KELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTY 228 (327)
T ss_pred cC----ceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEe
Confidence 74 3566677789999999999999999999999999999999987665554
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.8e-22 Score=153.53 Aligned_cols=172 Identities=16% Similarity=0.174 Sum_probs=127.1
Q ss_pred cccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-ccce-eccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-LSQW-CLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-~~~~-~~~~~~~-~~~~~ 77 (197)
+...+.+++|+. ...+.+|.++|.+++|+|+. +.+|+||+.||+|+|||+.+... .... .....+. +...|
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~-~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V 128 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCF-SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI 128 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCC-CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence 455677888864 34688999999999999952 68999999999999999976432 1110 1111222 36789
Q ss_pred eeEEEccCCCcc-cce-----eEEEEe------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 78 SCLTWNHSFSRF-NSI-----SIMYEA------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 78 ~~~~~~~~~~~~-~~~-----~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
.+++|+|++..+ +++ +++||+ ..+ .|...|.+++|+++.-+|++++.|+.|++||.++ ...
T Consensus 129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i--~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs-----g~~ 201 (568)
T PTZ00420 129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI--NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK-----QEI 201 (568)
T ss_pred EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE--ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCC-----CcE
Confidence 999999998765 333 899992 223 2567899999994433449999999999999987 566
Q ss_pred eeeecCceecEE-----EEEEccCCCEEEEEeCCC----cEEEEEcCCC
Q psy13207 146 IGNFEDHYCTVW-----RVSWNITGTIVASSGDDG----CVRLWKLKKK 185 (197)
Q Consensus 146 ~~~~~~h~~~v~-----~~~~~p~~~~l~~~~~dg----~i~iw~~~~~ 185 (197)
+..+.+|.+.+. ...|++++.+|++++.|+ +|+|||+++.
T Consensus 202 i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~ 250 (568)
T PTZ00420 202 ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT 250 (568)
T ss_pred EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC
Confidence 777888876543 334568999999988774 7999999864
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-23 Score=158.07 Aligned_cols=133 Identities=17% Similarity=0.230 Sum_probs=109.2
Q ss_pred ecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 21 LVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
+.+|.++|.+++|+| + +++|++|+.|++|++||+.+....... ... +.
T Consensus 71 l~GH~~~V~~v~fsP~d--~~~LaSgS~DgtIkIWdi~~~~~~~~~--------~~~---------------------l~ 119 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFD--PQKLFTASEDGTIMGWGIPEEGLTQNI--------SDP---------------------IV 119 (493)
T ss_pred EeCCCCCEEEEEEcCCC--CCEEEEEeCCCEEEEEecCCCcccccc--------Ccc---------------------eE
Confidence 678999999999999 6 889999999999999999764321000 000 22
Q ss_pred EecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 100 SINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
.+. +|...|.+++|+| +.+ ++++.|+.|++||+++ ...+..+.+|...|.+++|+|+|++|++++.|++
T Consensus 120 ~L~-gH~~~V~~l~f~P~~~~iL--aSgs~DgtVrIWDl~t-----g~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~ 191 (493)
T PTZ00421 120 HLQ-GHTKKVGIVSFHPSAMNVL--ASAGADMVVNVWDVER-----GKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKK 191 (493)
T ss_pred Eec-CCCCcEEEEEeCcCCCCEE--EEEeCCCEEEEEECCC-----CeEEEEEcCCCCceEEEEEECCCCEEEEecCCCE
Confidence 344 8999999999994 345 9999999999999976 5667788899999999999999999999999999
Q ss_pred EEEEEcCCCcchhhhh
Q psy13207 177 VRLWKLKKKRKKKKEE 192 (197)
Q Consensus 177 i~iw~~~~~~~~~~~~ 192 (197)
|++||+++++....+.
T Consensus 192 IrIwD~rsg~~v~tl~ 207 (493)
T PTZ00421 192 LNIIDPRDGTIVSSVE 207 (493)
T ss_pred EEEEECCCCcEEEEEe
Confidence 9999999877655443
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-23 Score=146.51 Aligned_cols=150 Identities=17% Similarity=0.278 Sum_probs=129.1
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
++.||+.+|.++.|++. ..+.+++.|.+|+.||+.++... .++.++..+.|+..+|..+.++++ ++
T Consensus 255 tl~GHt~~Vs~V~w~d~---~v~yS~SwDHTIk~WDletg~~~------~~~~~~ksl~~i~~~~~~~Ll~~gssdr~ir 325 (423)
T KOG0313|consen 255 TLEGHTEPVSSVVWSDA---TVIYSVSWDHTIKVWDLETGGLK------STLTTNKSLNCISYSPLSKLLASGSSDRHIR 325 (423)
T ss_pred EecccccceeeEEEcCC---CceEeecccceEEEEEeecccce------eeeecCcceeEeecccccceeeecCCCCcee
Confidence 47899999999999984 47899999999999999988643 334447789999999999998877 89
Q ss_pred EEE---------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 95 MYE---------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 95 ~~~---------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+|| ...+. +|...|.++.|+ .+.+.|++++.|+++++||+|+. ..++..+.+|...|.++.|. +
T Consensus 326 l~DPR~~~gs~v~~s~~-gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~----k~plydI~~h~DKvl~vdW~-~ 399 (423)
T KOG0313|consen 326 LWDPRTGDGSVVSQSLI-GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST----KAPLYDIAGHNDKVLSVDWN-E 399 (423)
T ss_pred ecCCCCCCCceeEEeee-cchhhhhheecCCCCceEEEEEecCCeEEEEEeccC----CCcceeeccCCceEEEEecc-C
Confidence 999 56677 999999999999 55566699999999999999972 33788999999999999998 5
Q ss_pred CCEEEEEeCCCcEEEEEcCC
Q psy13207 165 GTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~~ 184 (197)
+.++++|+.|.+|+++.-..
T Consensus 400 ~~~IvSGGaD~~l~i~~~~~ 419 (423)
T KOG0313|consen 400 GGLIVSGGADNKLRIFKGSP 419 (423)
T ss_pred CceEEeccCcceEEEecccc
Confidence 67899999999999997543
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.3e-23 Score=139.89 Aligned_cols=167 Identities=16% Similarity=0.222 Sum_probs=130.9
Q ss_pred ccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++-+|++++.. .+.+|++.|..+.|... .+-+++.+.|++|++||.+++...+. ++.+.+++++
T Consensus 119 g~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~e--D~~iLSSadd~tVRLWD~rTgt~v~s------L~~~s~VtSl 190 (334)
T KOG0278|consen 119 GQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHE--DKCILSSADDKTVRLWDHRTGTEVQS------LEFNSPVTSL 190 (334)
T ss_pred chHHHhhhhhccCCCCCchhhcCCCCcceeEEEecc--CceEEeeccCCceEEEEeccCcEEEE------EecCCCCcce
Confidence 4456667777653 47899999999999987 77788889999999999999876543 3346789999
Q ss_pred EEccCCCcccc----eeEEEEeeEecc--c--CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee-cC
Q psy13207 81 TWNHSFSRFNS----ISIMYEAHSINA--E--HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF-ED 151 (197)
Q Consensus 81 ~~~~~~~~~~~----~~~~~~~~~~~~--~--~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~ 151 (197)
..+++|+++.+ ++.+||...+.. . -...|.+...+|+.-.|++|++|..++.||..+ ++.+..+ ++
T Consensus 191 Evs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~T-----geEi~~~nkg 265 (334)
T KOG0278|consen 191 EVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNT-----GEEIGSYNKG 265 (334)
T ss_pred eeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccC-----CceeeecccC
Confidence 99999999754 489999322220 1 233455555665544459999999999999987 5556555 89
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|.++|.|+.|+|+|..-++||.||+|++|....++
T Consensus 266 h~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 266 HFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred CCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 99999999999999999999999999999986544
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=147.97 Aligned_cols=174 Identities=23% Similarity=0.366 Sum_probs=142.2
Q ss_pred cccccccceeeeee------e---ec------C----CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccccee
Q psy13207 6 LQSEKCLNQWTRRS------N---LV------D----SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWC 66 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------~---~~------~----h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 66 (197)
+..+-+.|+|++.. + |+ + .+..|++++|+.+ |..||+|+.||.++||+..... +
T Consensus 197 g~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~--G~~LatG~~~G~~riw~~~G~l-~---- 269 (524)
T KOG0273|consen 197 GSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND--GTLLATGSEDGEARIWNKDGNL-I---- 269 (524)
T ss_pred cCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC--CCeEEEeecCcEEEEEecCchh-h----
Confidence 45566778887753 1 11 1 2357999999998 9999999999999999976542 1
Q ss_pred ccceec-cCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEE
Q psy13207 67 LQHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVT 133 (197)
Q Consensus 67 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~ 133 (197)
.++. ++.+|.++.|+..|.+++++ +.+|| ...+. -|..+...+.|- .+.+ ++++.|+.|+|+
T Consensus 270 --~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~-~~s~~~lDVdW~~~~~F--~ts~td~~i~V~ 344 (524)
T KOG0273|consen 270 --STLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFE-FHSAPALDVDWQSNDEF--ATSSTDGCIHVC 344 (524)
T ss_pred --hhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeee-eccCCccceEEecCceE--eecCCCceEEEE
Confidence 2222 37899999999999998766 78999 34455 567777888897 7888 999999999999
Q ss_pred EccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
.+.. ..++..+.+|.+.|.++.|+|.|.+|+++|.|++++||+.........+..|..
T Consensus 345 kv~~-----~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hsk 402 (524)
T KOG0273|consen 345 KVGE-----DRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSK 402 (524)
T ss_pred EecC-----CCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcc
Confidence 9965 678889999999999999999999999999999999999998888887777663
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=147.03 Aligned_cols=174 Identities=14% Similarity=0.196 Sum_probs=149.3
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
.+..|.++++|++.. ++.||...|..+++++. ..++++++.|+.|+.||+...+.++.+- .+-..|.|
T Consensus 168 tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~r--HpYlFs~gedk~VKCwDLe~nkvIR~Yh-----GHlS~V~~ 240 (460)
T KOG0285|consen 168 TGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKR--HPYLFSAGEDKQVKCWDLEYNKVIRHYH-----GHLSGVYC 240 (460)
T ss_pred ecCCCceeEEEEcccCeEEEeecchhheeeeeeeccc--CceEEEecCCCeeEEEechhhhhHHHhc-----cccceeEE
Confidence 367889999999764 68899999999999998 8899999999999999999887665432 12468999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
++.+|.-+.++++ +++|| +..+. +|...|..+.+. .-.+ ++|+.|++|++||++. ++..
T Consensus 241 L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~-GH~~~V~~V~~~~~dpqv--it~S~D~tvrlWDl~a-----gkt~ 312 (460)
T KOG0285|consen 241 LDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLS-GHTNPVASVMCQPTDPQV--ITGSHDSTVRLWDLRA-----GKTM 312 (460)
T ss_pred EeccccceeEEecCCcceEEEeeecccceEEEec-CCCCcceeEEeecCCCce--EEecCCceEEEeeecc-----Ccee
Confidence 9999999988766 89999 77888 999999999998 4445 8999999999999987 7788
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
..+..|+..|.+++.+|....+|+++.| .|+-|++..+.-...+..+
T Consensus 313 ~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh 359 (460)
T KOG0285|consen 313 ITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGH 359 (460)
T ss_pred EeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccc
Confidence 8889999999999999999999999987 7899999887766665444
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-22 Score=164.75 Aligned_cols=169 Identities=14% Similarity=0.208 Sum_probs=137.2
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|.+.|++++|+| + +.+|+||+.||+|++||++++..+..+ .....+.+
T Consensus 551 ~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~--~~~L~Sgs~Dg~v~iWd~~~~~~~~~~------~~~~~v~~ 622 (793)
T PLN00181 551 SNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSAD--PTLLASGSDDGSVKLWSINQGVSIGTI------KTKANICC 622 (793)
T ss_pred EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCC--CCEEEEEcCCCEEEEEECCCCcEEEEE------ecCCCeEE
Confidence 3568999999864 35789999999999997 5 889999999999999999877554332 22457889
Q ss_pred EEEc-cCCCcccce-----eEEEEe-------eEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCc-cccee
Q psy13207 80 LTWN-HSFSRFNSI-----SIMYEA-------HSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGT-RFDIE 144 (197)
Q Consensus 80 ~~~~-~~~~~~~~~-----~~~~~~-------~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~-~~~~~ 144 (197)
+.|. +++..++++ +++||+ ..+. +|...|.++.|. +..+ ++++.|+.|++||++... .....
T Consensus 623 v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~~~V~~v~f~~~~~l--vs~s~D~~ikiWd~~~~~~~~~~~ 699 (793)
T PLN00181 623 VQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHSKTVSYVRFVDSSTL--VSSSTDNTLKLWDLSMSISGINET 699 (793)
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCCCCEEEEEEeCCCEE--EEEECCCEEEEEeCCCCccccCCc
Confidence 9995 467777765 799992 3445 799999999998 6777 999999999999997421 11235
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
++..+.+|...+.+++|+|++.+|++|+.|+.|++|+....
T Consensus 700 ~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 700 PLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred ceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence 67788999999999999999999999999999999997654
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=147.16 Aligned_cols=161 Identities=20% Similarity=0.291 Sum_probs=131.3
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+|..|.+.|+++.|+|. ...|++|+.|++|+++|+......+.++ .+....++.++.|+|.|.+++.+ +
T Consensus 166 RTlYDH~devn~l~FHPr--e~ILiS~srD~tvKlFDfsK~saKrA~K---~~qd~~~vrsiSfHPsGefllvgTdHp~~ 240 (430)
T KOG0640|consen 166 RTLYDHVDEVNDLDFHPR--ETILISGSRDNTVKLFDFSKTSAKRAFK---VFQDTEPVRSISFHPSGEFLLVGTDHPTL 240 (430)
T ss_pred eehhhccCcccceeecch--hheEEeccCCCeEEEEecccHHHHHHHH---HhhccceeeeEeecCCCceEEEecCCCce
Confidence 357789999999999998 9999999999999999997654333333 22335689999999999998876 7
Q ss_pred EEEEeeEec--------ccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-Cce-ecEEEEEE
Q psy13207 94 IMYEAHSIN--------AEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DHY-CTVWRVSW 161 (197)
Q Consensus 94 ~~~~~~~~~--------~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h~-~~v~~~~~ 161 (197)
++||+.+++ ..|...|+++.++ +... ++++.||.|++||--+ .+++..+. +|. ..|.+..|
T Consensus 241 rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lY--vTaSkDG~IklwDGVS-----~rCv~t~~~AH~gsevcSa~F 313 (430)
T KOG0640|consen 241 RLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLY--VTASKDGAIKLWDGVS-----NRCVRTIGNAHGGSEVCSAVF 313 (430)
T ss_pred eEEeccceeEeeecCcccccccceeEEEecCCccEE--EEeccCCcEEeecccc-----HHHHHHHHhhcCCceeeeEEE
Confidence 999944332 2688999999999 5555 9999999999999755 56666653 454 57899999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+|+|+++.+.|..+++|.+.++..++.+
T Consensus 314 tkn~kyiLsSG~DS~vkLWEi~t~R~l~~Y 343 (430)
T KOG0640|consen 314 TKNGKYILSSGKDSTVKLWEISTGRMLKEY 343 (430)
T ss_pred ccCCeEEeecCCcceeeeeeecCCceEEEE
Confidence 999999999999999999999988766554
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-24 Score=152.03 Aligned_cols=164 Identities=16% Similarity=0.291 Sum_probs=137.6
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (197)
++.+|.++++|+..+ ++-+|..+|..+.|+.. +++|++.|.++.+||+..+..+ .+...+.+ ...|.
T Consensus 252 sGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng----~mvtcSkDrsiaVWdm~sps~i---t~rrVLvGHrAaVN 324 (499)
T KOG0281|consen 252 SGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNG----YMVTCSKDRSIAVWDMASPTDI---TLRRVLVGHRAAVN 324 (499)
T ss_pred ecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCC----EEEEecCCceeEEEeccCchHH---HHHHHHhhhhhhee
Confidence 578999999999764 57789999999999864 8999999999999999876532 22223332 56777
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
.+.|+.. +++++ +++|+ ++++. +|...|-|+.+.+.++ ++|+.|.+|++||+.. +.++.
T Consensus 325 vVdfd~k--yIVsASgDRTikvW~~st~efvRtl~-gHkRGIAClQYr~rlv--VSGSSDntIRlwdi~~-----G~cLR 394 (499)
T KOG0281|consen 325 VVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLN-GHKRGIACLQYRDRLV--VSGSSDNTIRLWDIEC-----GACLR 394 (499)
T ss_pred eeccccc--eEEEecCCceEEEEeccceeeehhhh-cccccceehhccCeEE--EecCCCceEEEEeccc-----cHHHH
Confidence 8887655 55443 89999 77788 9999999999999999 9999999999999987 78999
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+.||..-|.|+.| |.+.+++|+.||+|++||+.....
T Consensus 395 vLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aald 432 (499)
T KOG0281|consen 395 VLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALD 432 (499)
T ss_pred HHhchHHhhhheee--cCceeeeccccceEEEEecccccC
Confidence 99999999999999 477899999999999999987543
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=160.47 Aligned_cols=156 Identities=21% Similarity=0.258 Sum_probs=109.5
Q ss_pred eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc-eeccc----eeccCCCeeeEEE-----------
Q psy13207 20 NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ-WCLQH----EVACPTLASCLTW----------- 82 (197)
Q Consensus 20 ~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~----------- 82 (197)
.+. +|.++|+++.|+++ |++||+||+|+.|+||.+...+.... ..... .+.....+.-+.-
T Consensus 261 e~~~ah~gaIw~mKFS~D--GKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHD--GKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred ccccccCCcEEEEEeCCC--CceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 455 89999999999999 99999999999999999876221100 00000 0000000000000
Q ss_pred ccCCCcccc-----eeEEE-E--eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce
Q psy13207 83 NHSFSRFNS-----ISIMY-E--AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY 153 (197)
Q Consensus 83 ~~~~~~~~~-----~~~~~-~--~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~ 153 (197)
...+..... ...++ + +..+. +|...|..|.|+ .++| ++++.|++||+|++.. ..++..|. |.
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~-GHt~DILDlSWSKn~fL--LSSSMDKTVRLWh~~~-----~~CL~~F~-Hn 409 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFK-GHTADILDLSWSKNNFL--LSSSMDKTVRLWHPGR-----KECLKVFS-HN 409 (712)
T ss_pred cccccCCccccCCCccccccccchhhhh-ccchhheecccccCCee--EeccccccEEeecCCC-----cceeeEEe-cC
Confidence 000000000 01111 1 66677 999999999999 8888 9999999999999976 67777764 89
Q ss_pred ecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 154 CTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 154 ~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+.|+|++|+| |.+||++||.||.|+||++...+
T Consensus 410 dfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~ 443 (712)
T KOG0283|consen 410 DFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK 443 (712)
T ss_pred CeeEEEEecccCCCcEeecccccceEEeecCcCe
Confidence 9999999999 88999999999999999997654
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=136.33 Aligned_cols=172 Identities=14% Similarity=0.165 Sum_probs=145.7
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.+|.++|+|++. +++.+|...|..++.+.+ ...|++|+.|..+.+||+.+++.++.|.- +...|..+.
T Consensus 36 GsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~D--nskf~s~GgDk~v~vwDV~TGkv~Rr~rg-----H~aqVNtV~ 108 (307)
T KOG0316|consen 36 GSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSD--NSKFASCGGDKAVQVWDVNTGKVDRRFRG-----HLAQVNTVR 108 (307)
T ss_pred CCCceEEeecccccceeeeecCCCceeeecccccc--ccccccCCCCceEEEEEcccCeeeeeccc-----ccceeeEEE
Confidence 578899999864 578899999999999998 88999999999999999999987765542 256789999
Q ss_pred EccCCCcccce-----eEEEE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 82 WNHSFSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
|+.+...++++ +++|| ++.+. .....|.++..+.+.+ ++|+.||++|.||++. +.....
T Consensus 109 fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQild-ea~D~V~Si~v~~heI--vaGS~DGtvRtydiR~-----G~l~sD 180 (307)
T KOG0316|consen 109 FNEESSVVASGSFDSSVRLWDCRSRSFEPIQILD-EAKDGVSSIDVAEHEI--VAGSVDGTVRTYDIRK-----GTLSSD 180 (307)
T ss_pred ecCcceEEEeccccceeEEEEcccCCCCccchhh-hhcCceeEEEecccEE--EeeccCCcEEEEEeec-----ceeehh
Confidence 99998887655 89999 55555 5667899999999999 9999999999999986 555555
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
+-+ .+|++++|+++++..+.++.|+++++.|-.+++..+.+..+.
T Consensus 181 y~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhk 225 (307)
T KOG0316|consen 181 YFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHK 225 (307)
T ss_pred hcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccc
Confidence 554 489999999999999999999999999999988777766553
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=143.95 Aligned_cols=141 Identities=19% Similarity=0.407 Sum_probs=111.3
Q ss_pred cccccceeeeee--------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 8 SEKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 8 ~~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
-.+.+++|.+.. .|.+|+..|-.++|+|.. ...|+|||-||+|+|||++.+.... .
T Consensus 232 c~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE-~~vfaScS~DgsIrIWDiRs~~~~~-------------~-- 295 (440)
T KOG0302|consen 232 CVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE-DGVFASCSCDGSIRIWDIRSGPKKA-------------A-- 295 (440)
T ss_pred cccceEeeeeccCceeecCccccccccchhhhccCCcc-CceEEeeecCceEEEEEecCCCccc-------------e--
Confidence 344556665542 377899999999999974 6789999999999999999863211 1
Q ss_pred EEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 80 LTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+ ..+ .|...|+.|.|+.+.-+|++|+.||+++|||+|+-+ ...++..++.|+.+|+++
T Consensus 296 ~-------------------~~k-Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~--~~~pVA~fk~Hk~pItsi 353 (440)
T KOG0302|consen 296 V-------------------STK-AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFK--SGQPVATFKYHKAPITSI 353 (440)
T ss_pred e-------------------Eee-ccCCceeeEEccCCcceeeecCCCceEEEEEhhhcc--CCCcceeEEeccCCeeEE
Confidence 0 112 899999999999333244999999999999998732 146888999999999999
Q ss_pred EEccC-CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 160 SWNIT-GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 160 ~~~p~-~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
.|+|. ...|++++.|..|.+||+....
T Consensus 354 eW~p~e~s~iaasg~D~QitiWDlsvE~ 381 (440)
T KOG0302|consen 354 EWHPHEDSVIAASGEDNQITIWDLSVEA 381 (440)
T ss_pred EeccccCceEEeccCCCcEEEEEeeccC
Confidence 99994 5788889999999999997644
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-22 Score=144.47 Aligned_cols=165 Identities=16% Similarity=0.270 Sum_probs=131.9
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceecc-CCCeeeEEEccCCCcccce-----
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVAC-PTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 92 (197)
+|.+|.+.-.++.|++.. .-.|++++.|++|.+||++..... ........+.+ ...|..++|++....++++
T Consensus 172 ~L~gH~~eg~glsWn~~~-~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~ 250 (422)
T KOG0264|consen 172 RLKGHEKEGYGLSWNRQQ-EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDG 250 (422)
T ss_pred EEEeeccccccccccccc-ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCC
Confidence 578999888999999964 457899999999999999865432 22222333333 7789999999988876554
Q ss_pred -eEEEEee--------EecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 -SIMYEAH--------SINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 -~~~~~~~--------~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+.+||.+ ... +|...++|++|+ .+...||||+.|++|.+||+|+. ..++..+.+|...|.++.|+
T Consensus 251 ~L~iwD~R~~~~~~~~~~~-ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL----~~~lh~~e~H~dev~~V~WS 325 (422)
T KOG0264|consen 251 KLMIWDTRSNTSKPSHSVK-AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNL----NKPLHTFEGHEDEVFQVEWS 325 (422)
T ss_pred eEEEEEcCCCCCCCccccc-ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhc----ccCceeccCCCcceEEEEeC
Confidence 7999955 233 789999999999 44455599999999999999973 45788999999999999999
Q ss_pred cC-CCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 163 IT-GTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 163 p~-~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
|. ...||+++.|+.+.+||+..-+..+.
T Consensus 326 Ph~etvLASSg~D~rl~vWDls~ig~eq~ 354 (422)
T KOG0264|consen 326 PHNETVLASSGTDRRLNVWDLSRIGEEQS 354 (422)
T ss_pred CCCCceeEecccCCcEEEEeccccccccC
Confidence 95 68999999999999999987665544
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-22 Score=152.78 Aligned_cols=171 Identities=19% Similarity=0.239 Sum_probs=120.8
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-----ccceec--cceecc
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-----LSQWCL--QHEVAC 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-----~~~~~~--~~~~~~ 73 (197)
+.+.|.+.++++.. +..+|.++|+.++.+|+ +..++|||.|.+|++||..-... .+.+.+ ..+++-
T Consensus 430 G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD--~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel 507 (888)
T KOG0306|consen 430 GTKNGELQVFDLASASLVETIRAHDGAIWSISLSPD--NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLEL 507 (888)
T ss_pred eccCCceEEEEeehhhhhhhhhccccceeeeeecCC--CCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEec
Confidence 45566666666543 46789999999999999 99999999999999999853221 111222 234444
Q ss_pred CCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEE---------
Q psy13207 74 PTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVT--------- 133 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~--------- 133 (197)
...+.|+.++|++++++.+ +.+|- .-.+. +|.-+|.|+..+++.-+++||+.|+.|++|
T Consensus 508 ~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHK 586 (888)
T KOG0306|consen 508 EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHK 586 (888)
T ss_pred cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhh
Confidence 7889999999999998776 34443 22233 455555555555222222555555555555
Q ss_pred ---------------------------------EccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 134 ---------------------------------RDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 134 ---------------------------------d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
|-+. -+.+..+.+|...|+|++.+|+|.+++++|+|.+|++|
T Consensus 587 S~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k-----Fe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlw 661 (888)
T KOG0306|consen 587 SFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK-----FEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLW 661 (888)
T ss_pred hhhcccCceeEEEEcccceeEEEecCcceEEeechhh-----hhhheeeccchheeeeeEEcCCCCeEEeccCCceeEee
Confidence 4332 45677788999999999999999999999999999999
Q ss_pred EcCC
Q psy13207 181 KLKK 184 (197)
Q Consensus 181 ~~~~ 184 (197)
....
T Consensus 662 E~td 665 (888)
T KOG0306|consen 662 ERTD 665 (888)
T ss_pred eccC
Confidence 8765
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-22 Score=137.41 Aligned_cols=164 Identities=16% Similarity=0.214 Sum_probs=133.8
Q ss_pred Ccccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 5 PLQSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
++..|..+-+|++.. .+++|.++|..+.|.++ +..+++++.|.+++.||+++++....++... ..+.
T Consensus 64 SgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d--~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~-----~~vN 136 (338)
T KOG0265|consen 64 SGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRD--GSHILSCGTDKTVRGWDAETGKRIRKHKGHT-----SFVN 136 (338)
T ss_pred ecCCcceEEEEeccccccceeeeccccceeEeeeeccC--CCEEEEecCCceEEEEecccceeeehhcccc-----ceee
Confidence 467889999998642 58899999999999999 9999999999999999999998765544322 2344
Q ss_pred eEEEccCCCcccc------eeEEEEee------EecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCccccee
Q psy13207 79 CLTWNHSFSRFNS------ISIMYEAH------SINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 79 ~~~~~~~~~~~~~------~~~~~~~~------~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
++.-+.-|..++. .+++||++ ++. ....++++.|. ++.+ .+|+-|+.|++||++. ..
T Consensus 137 s~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~--~kyqltAv~f~d~s~qv--~sggIdn~ikvWd~r~-----~d 207 (338)
T KOG0265|consen 137 SLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE--NKYQLTAVGFKDTSDQV--ISGGIDNDIKVWDLRK-----ND 207 (338)
T ss_pred ecCccccCCeEEEecCCCceEEEEeecccchhhccc--cceeEEEEEecccccce--eeccccCceeeecccc-----Cc
Confidence 4442223333332 37999944 333 46789999999 7888 9999999999999976 67
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+..+.+|.++|+.+..+|+|.++.+-+.|.++++||++-
T Consensus 208 ~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 208 GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred ceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence 8889999999999999999999999999999999999974
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.6e-22 Score=135.50 Aligned_cols=175 Identities=17% Similarity=0.166 Sum_probs=138.3
Q ss_pred Ccccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 5 PLQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
++..+++++.|++.. ...+|.+.|-.+.|.|.+ ...|++++.|.+|++||++.++...+.. ....=
T Consensus 37 sgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~-~d~~atas~dk~ir~wd~r~~k~~~~i~------~~~en 109 (313)
T KOG1407|consen 37 SGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH-PDLFATASGDKTIRIWDIRSGKCTARIE------TKGEN 109 (313)
T ss_pred ecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC-CcceEEecCCceEEEEEeccCcEEEEee------ccCcc
Confidence 567889999998763 367899999999999964 6789999999999999999887654332 12233
Q ss_pred eeEEEccCCCcccce-----e----------------------EEEE-------------------------eeEecccC
Q psy13207 78 SCLTWNHSFSRFNSI-----S----------------------IMYE-------------------------AHSINAEH 105 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~-----~----------------------~~~~-------------------------~~~~~~~~ 105 (197)
.-+.|+|++.+++.+ + ..|. +..++ +|
T Consensus 110 i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~-AH 188 (313)
T KOG1407|consen 110 INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIK-AH 188 (313)
T ss_pred eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccc-cC
Confidence 456778887776544 1 1111 45566 89
Q ss_pred CCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 106 KDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 106 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...+.||.|+|..-+||+|+.|-.+-+||+.. .-+++.+..+.=+|..++|+.||++||++|.|..|-|=++.++
T Consensus 189 ~snCicI~f~p~GryfA~GsADAlvSLWD~~E-----LiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetG 263 (313)
T KOG1407|consen 189 PSNCICIEFDPDGRYFATGSADALVSLWDVDE-----LICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETG 263 (313)
T ss_pred CcceEEEEECCCCceEeeccccceeeccChhH-----hhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccC
Confidence 99999999995555559999999999999964 6677888888889999999999999999999999999999888
Q ss_pred cchhhhh
Q psy13207 186 RKKKKEE 192 (197)
Q Consensus 186 ~~~~~~~ 192 (197)
.++-+++
T Consensus 264 d~~~eI~ 270 (313)
T KOG1407|consen 264 DRVWEIP 270 (313)
T ss_pred CeEEEee
Confidence 7655443
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.6e-22 Score=140.72 Aligned_cols=186 Identities=16% Similarity=0.153 Sum_probs=137.7
Q ss_pred cccccccceeeee----eeecCCCcceeEEEECCC-CCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR----SNLVDSRTSVTDVKFGPK-QLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~----~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+|+|+.. ..+.+|.++|.+++|.-. .....|++++.|.++++|..+.++......... ..++..|.++
T Consensus 121 gsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~-~GHk~~V~sV 199 (423)
T KOG0313|consen 121 GSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVC-RGHKRSVDSV 199 (423)
T ss_pred eecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHh-cccccceeEE
Confidence 5789999999875 457899999998888543 113469999999999999998775432221111 1237889999
Q ss_pred EEccCCCcccce-----eEEEE-------------------------------eeEecccCCCceeEEEEc-CCCeEEEE
Q psy13207 81 TWNHSFSRFNSI-----SIMYE-------------------------------AHSINAEHKDLIHDVAYD-YYGLRMAT 123 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~-------------------------------~~~~~~~~~~~i~~~~~~-~~~~~~~s 123 (197)
+-.+++..+.++ +.+|+ +..+. +|...|.++.|+ +..+ .+
T Consensus 200 sv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~-GHt~~Vs~V~w~d~~v~--yS 276 (423)
T KOG0313|consen 200 SVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE-GHTEPVSSVVWSDATVI--YS 276 (423)
T ss_pred EecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEec-ccccceeeEEEcCCCce--Ee
Confidence 999999888665 78888 44556 888888888888 5656 77
Q ss_pred eeCCCeEEEEEccCCcc--------------------------------------cc-eeeeeeecCceecEEEEEEcc-
Q psy13207 124 CSSDQNIKVTRDVMGTR--------------------------------------FD-IETIGNFEDHYCTVWRVSWNI- 163 (197)
Q Consensus 124 ~~~d~~i~~~d~~~~~~--------------------------------------~~-~~~~~~~~~h~~~v~~~~~~p- 163 (197)
++-|.+|+.||+.++.. .+ .-...++.+|.+.|.++.|+|
T Consensus 277 ~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~ 356 (423)
T KOG0313|consen 277 VSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPT 356 (423)
T ss_pred ecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCC
Confidence 77777777777663211 01 123345679999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCc-chhhhhhhh
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKR-KKKKEEEEE 195 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~ 195 (197)
+..+|++++.|+++++||++..+ ....+..|+
T Consensus 357 ~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~ 389 (423)
T KOG0313|consen 357 NEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHN 389 (423)
T ss_pred CceEEEEEecCCeEEEEEeccCCCcceeeccCC
Confidence 45788999999999999999876 566665554
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=137.46 Aligned_cols=161 Identities=13% Similarity=0.152 Sum_probs=132.7
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+|..|.+.|.+++.+|+ .++++||+.|..-.+|++.++..+.+ ...++..|+++.|+.++.+|+++ +
T Consensus 58 ~tF~~H~~svFavsl~P~--~~l~aTGGgDD~AflW~~~~ge~~~e-----ltgHKDSVt~~~FshdgtlLATGdmsG~v 130 (399)
T KOG0296|consen 58 VTFDKHTDSVFAVSLHPN--NNLVATGGGDDLAFLWDISTGEFAGE-----LTGHKDSVTCCSFSHDGTLLATGDMSGKV 130 (399)
T ss_pred eehhhcCCceEEEEeCCC--CceEEecCCCceEEEEEccCCcceeE-----ecCCCCceEEEEEccCceEEEecCCCccE
Confidence 568899999999999997 99999999999999999998864322 22348899999999999999887 7
Q ss_pred EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
++|+ ...+. .....|.=+.|+|....|+.|+.||.+-+|.+.+ ....+.+.+|..++++-.|.|+|+.
T Consensus 131 ~v~~~stg~~~~~~~-~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~-----~~~~kv~~Gh~~~ct~G~f~pdGKr 204 (399)
T KOG0296|consen 131 LVFKVSTGGEQWKLD-QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS-----QALCKVMSGHNSPCTCGEFIPDGKR 204 (399)
T ss_pred EEEEcccCceEEEee-cccCceEEEEecccccEEEeecCCCcEEEEECCC-----cceeeEecCCCCCcccccccCCCce
Confidence 8888 12221 2334555677775555559999999999999975 4667788999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
++++..||+|++||++++.....+.
T Consensus 205 ~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 205 ILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred EEEEecCceEEEEecCCCceeEEec
Confidence 9999999999999999987655544
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=141.32 Aligned_cols=176 Identities=19% Similarity=0.246 Sum_probs=139.6
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++-+++.. .+|.||+..|+.+.|+|+ ...+++++.|-.|++|........ .....+..+|+.+
T Consensus 237 GG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~--~~~v~~aSad~~i~vws~~~~s~~-----~~~~~h~~~V~~l 309 (506)
T KOG0289|consen 237 GGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKD--LDTVITASADEIIRVWSVPLSSEP-----TSSRPHEEPVTGL 309 (506)
T ss_pred cCCCCceEEEecchhhhhhhccCcceEEEEEEeccc--hhheeecCCcceEEeeccccccCc-----cccccccccceee
Confidence 4555566666544 358999999999999998 888999999999999998765321 2222347899999
Q ss_pred EEccCCCcccce----eEEEE-------eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI----SIMYE-------AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~~-------~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
..+|.|.||..+ ...|. +.... ....-.+++.+|+|+.+.|.+|..|+.+++||+++ ...+..
T Consensus 310 s~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks-----~~~~a~ 384 (506)
T KOG0289|consen 310 SLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS-----QTNVAK 384 (506)
T ss_pred eeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC-----cccccc
Confidence 999999998765 12222 22222 01234588999999999889999999999999987 567788
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
|.+|.++|..++|+-+|-+|++++.|+.|++||+++.+.++++.-
T Consensus 385 Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l 429 (506)
T KOG0289|consen 385 FPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQL 429 (506)
T ss_pred CCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeec
Confidence 999999999999999999999999999999999999887776653
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-21 Score=141.92 Aligned_cols=162 Identities=16% Similarity=0.226 Sum_probs=133.8
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
++..++..|..-|+|++|+|+ |.+++|++.||++.+||-.+++.+..+. ....++..|..++|+||+..+++.
T Consensus 181 KFk~s~r~HskFV~~VRysPD--G~~Fat~gsDgki~iyDGktge~vg~l~--~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 181 KFKSSFREHSKFVNCVRYSPD--GSRFATAGSDGKIYIYDGKTGEKVGELE--DSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred eeeecccccccceeeEEECCC--CCeEEEecCCccEEEEcCCCccEEEEec--CCCCccccEEEEEECCCCceEEEecCC
Confidence 455567889999999999999 9999999999999999999988765443 233458899999999999998765
Q ss_pred --eEEEE------eeEecccC--CCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 --SIMYE------AHSINAEH--KDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 --~~~~~------~~~~~~~~--~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+++|| +.++.-+. ...-..+.|..+.+ ++.+.+|.|..++... ...+..+.+|...|+++..+
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~l--ItVSl~G~in~ln~~d-----~~~~~~i~GHnK~ITaLtv~ 329 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHL--ITVSLSGTINYLNPSD-----PSVLKVISGHNKSITALTVS 329 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeE--EEEEcCcEEEEecccC-----CChhheecccccceeEEEEc
Confidence 79999 33443111 13345566777778 9999999999999865 56888899999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 163 ITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
|++++|++|+.||.|.-|+..++..-
T Consensus 330 ~d~~~i~SgsyDG~I~~W~~~~g~~~ 355 (603)
T KOG0318|consen 330 PDGKTIYSGSYDGHINSWDSGSGTSD 355 (603)
T ss_pred CCCCEEEeeccCceEEEEecCCcccc
Confidence 99999999999999999999876543
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-22 Score=135.16 Aligned_cols=162 Identities=16% Similarity=0.303 Sum_probs=133.4
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (197)
.=|+++++|+.. .++.+|.+.|....|+|. .++.++++|.|++++|||++....... ++ +...+.|+
T Consensus 124 SWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~-~~nlfas~Sgd~~l~lwdvr~~gk~~~------i~ah~~Eil~c 196 (311)
T KOG0277|consen 124 SWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPH-IPNLFASASGDGTLRLWDVRSPGKFMS------IEAHNSEILCC 196 (311)
T ss_pred ccCCceEeecCCCCcceEeecCCccEEEEEecCCC-CCCeEEEccCCceEEEEEecCCCceeE------EEeccceeEee
Confidence 458899999864 469999999999999996 488999999999999999987643211 22 24689999
Q ss_pred EEccCCCcc-cce-----eEEEE-------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCccccee
Q psy13207 81 TWNHSFSRF-NSI-----SIMYE-------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 81 ~~~~~~~~~-~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
.|++....+ +++ ++.|| +..+. +|.-.|+.++|+ .+.+ ++++.|-++++||...+ ..
T Consensus 197 dw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~-gh~~AVRkvk~Sph~~~lL--aSasYDmT~riw~~~~~----ds 269 (311)
T KOG0277|consen 197 DWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELN-GHGLAVRKVKFSPHHASLL--ASASYDMTVRIWDPERQ----DS 269 (311)
T ss_pred cccccCCcEEEecCCCceEEEEehhhccccceeec-CCceEEEEEecCcchhhHh--hhccccceEEecccccc----hh
Confidence 999987765 333 89999 56667 899999999999 4556 99999999999998632 44
Q ss_pred eeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEc
Q psy13207 145 TIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~ 182 (197)
.+.....|+.-+..+.|++ ++.++|+++-|+.++||+.
T Consensus 270 ~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 270 AIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 5666778999999999998 6789999999999999985
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=146.02 Aligned_cols=172 Identities=14% Similarity=0.168 Sum_probs=125.3
Q ss_pred cccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc
Q psy13207 6 LQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 73 (197)
+..|+++++|++. ..+.+|...|.+++|+|+. +++|++++.|++|+|||+.+++.+..+. .+
T Consensus 94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~-~~iLaSgs~DgtVrIWDl~tg~~~~~l~-----~h 167 (493)
T PTZ00421 94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA-MNVLASAGADMVVNVWDVERGKAVEVIK-----CH 167 (493)
T ss_pred EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC-CCEEEEEeCCCEEEEEECCCCeEEEEEc-----CC
Confidence 4678999999863 3578999999999999972 3689999999999999998875432221 12
Q ss_pred CCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCc-eeEEEEcCCCeEEEEee----CCCeEEEEEccC
Q psy13207 74 PTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDL-IHDVAYDYYGLRMATCS----SDQNIKVTRDVM 137 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~-i~~~~~~~~~~~~~s~~----~d~~i~~~d~~~ 137 (197)
...|.+++|+|++..++++ +++|| +..+. +|... ...+.|.++.-.+++++ .|+.|++||+++
T Consensus 168 ~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~-~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 168 SDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVE-AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred CCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEe-cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 5679999999999998766 89999 44555 67654 34567773221225543 479999999975
Q ss_pred CcccceeeeeeecC-ceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcch
Q psy13207 138 GTRFDIETIGNFED-HYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRKK 188 (197)
Q Consensus 138 ~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~ 188 (197)
. ..++..... +...+....|++++++|++++ .|+.|++||+.++...
T Consensus 247 ~----~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 247 M----ASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLT 295 (493)
T ss_pred C----CCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceE
Confidence 2 122332222 234566678999999999887 5999999999886643
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=151.67 Aligned_cols=180 Identities=18% Similarity=0.291 Sum_probs=147.1
Q ss_pred cccccccceeeeee-----------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-cc
Q psy13207 6 LQSEKCLNQWTRRS-----------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-AC 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~ 73 (197)
+.+|+.++.|+..+ .++.|.+.|+++....+ ++.|+++|.|-+|++|+..... .+. ..++ .+
T Consensus 43 gGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~--~~tlIS~SsDtTVK~W~~~~~~---~~c-~stir~H 116 (735)
T KOG0308|consen 43 GGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGN--GKTLISASSDTTVKVWNAHKDN---TFC-MSTIRTH 116 (735)
T ss_pred cCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcC--CCceEEecCCceEEEeecccCc---chh-Hhhhhcc
Confidence 67899999998753 36679999999999887 8899999999999999987653 112 1222 23
Q ss_pred CCCeeeEEE-ccCCCcccce-----eEEEEeeEe----------------cccCCCceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 74 PTLASCLTW-NHSFSRFNSI-----SIMYEAHSI----------------NAEHKDLIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 74 ~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
...|.|+++ .++...++++ |.+||+... ..++...|++++.++....|++|+.++.++
T Consensus 117 ~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr 196 (735)
T KOG0308|consen 117 KDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLR 196 (735)
T ss_pred cchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceE
Confidence 778999999 6666666665 899993321 126778899999996655559999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
+||.++ .+.+..+++|+..|.++..++||+.++++|.||+|++||+....+..++..|+|
T Consensus 197 ~wDprt-----~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e 256 (735)
T KOG0308|consen 197 LWDPRT-----CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKE 256 (735)
T ss_pred Eecccc-----ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccC
Confidence 999988 677888889999999999999999999999999999999999988888776665
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=148.10 Aligned_cols=162 Identities=19% Similarity=0.254 Sum_probs=134.4
Q ss_pred eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-cccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-VMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 18 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..++.+|+..|.++.|.|.. +.+|++++.|+.|+||++.. .+.+++|.- +..+|..++|++++..+.++
T Consensus 207 ~~~~~gH~kgvsai~~fp~~-~hLlLS~gmD~~vklW~vy~~~~~lrtf~g-----H~k~Vrd~~~s~~g~~fLS~sfD~ 280 (503)
T KOG0282|consen 207 SHNLSGHTKGVSAIQWFPKK-GHLLLSGGMDGLVKLWNVYDDRRCLRTFKG-----HRKPVRDASFNNCGTSFLSASFDR 280 (503)
T ss_pred eeeccCCccccchhhhccce-eeEEEecCCCceEEEEEEecCcceehhhhc-----chhhhhhhhccccCCeeeeeecce
Confidence 35688999999999999932 89999999999999999976 444443331 26789999999999987665
Q ss_pred -eEEEE------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 -SIMYE------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 -~~~~~------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+++|| +..+. ....+.|+.|+ ++.+ ++|+.|+.|+.||+++ ++.+.++..|-+.|..+.|-
T Consensus 281 ~lKlwDtETG~~~~~f~--~~~~~~cvkf~pd~~n~f--l~G~sd~ki~~wDiRs-----~kvvqeYd~hLg~i~~i~F~ 351 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFH--LDKVPTCVKFHPDNQNIF--LVGGSDKKIRQWDIRS-----GKVVQEYDRHLGAILDITFV 351 (503)
T ss_pred eeeeeccccceEEEEEe--cCCCceeeecCCCCCcEE--EEecCCCcEEEEeccc-----hHHHHHHHhhhhheeeeEEc
Confidence 89999 33333 34567899999 3555 9999999999999998 78889999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 163 ITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
++|+++++++.|++++||+.+.+-.++.+.+.
T Consensus 352 ~~g~rFissSDdks~riWe~~~~v~ik~i~~~ 383 (503)
T KOG0282|consen 352 DEGRRFISSSDDKSVRIWENRIPVPIKNIADP 383 (503)
T ss_pred cCCceEeeeccCccEEEEEcCCCccchhhcch
Confidence 99999999999999999999887666655443
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=134.40 Aligned_cols=173 Identities=19% Similarity=0.290 Sum_probs=138.0
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.+++|+.. ..+..|...+..+.|+|+ ++.+++++.||.+++|++.+.+....+. .+...+.++.
T Consensus 28 ~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~i~~~~~~~~~~~~~-----~~~~~i~~~~ 100 (289)
T cd00200 28 SGDGTIKVWDLETGELLRTLKGHTGPVRDVAASAD--GTYLASGSSDKTIRLWDLETGECVRTLT-----GHTSYVSSVA 100 (289)
T ss_pred ecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCC--CCEEEEEcCCCeEEEEEcCcccceEEEe-----ccCCcEEEEE
Confidence 347889999876 357789999999999998 8899999999999999998764433222 1245799999
Q ss_pred EccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 82 WNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
|++++..++++ +.+|+ ...+. .|...+.+++|+++..++++++.|+.|++||+++ .+.+..+.
T Consensus 101 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~-----~~~~~~~~ 174 (289)
T cd00200 101 FSPDGRILSSSSRDKTIKVWDVETGKCLTTLR-GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT-----GKCVATLT 174 (289)
T ss_pred EcCCCCEEEEecCCCeEEEEECCCcEEEEEec-cCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc-----cccceeEe
Confidence 99997776544 78898 44455 6888999999995333336666799999999975 55666777
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.|...+.+++|+|+++.+++++.|+.+++||++..+....+.
T Consensus 175 ~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~ 216 (289)
T cd00200 175 GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR 216 (289)
T ss_pred cCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchh
Confidence 888899999999999999999999999999998766655553
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=135.42 Aligned_cols=162 Identities=19% Similarity=0.276 Sum_probs=118.7
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------e
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------S 93 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 93 (197)
.|++|.+.|++++|+.+ |..|+|++.|+.|++|++++-.....-.+..+++.+ ..+.+.|.||.+.++.. +
T Consensus 81 ~LKgH~~~vt~~~FsSd--GK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d-hpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSD--GKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD-HPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhccCCceeeeEEcCC--CceeEEEeCCceEEEEecchhhhhhhhHhhccccCC-CceEEEECCCcceEEEEEccCCEE
Confidence 47899999999999999 999999999999999999875433222223333333 67889999998876443 5
Q ss_pred EEEE-----------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC-------------------
Q psy13207 94 IMYE-----------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM------------------- 137 (197)
Q Consensus 94 ~~~~-----------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~------------------- 137 (197)
++|. -..+...|...+..+-..++..++++++.|..|.+|+++.
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavS 237 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVS 237 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeC
Confidence 6666 1112224455555555554444559999999999998761
Q ss_pred -------------------------CcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 138 -------------------------GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 138 -------------------------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
++.++...+.++++|...|..++|+|+.+.+++.|.||++++||.+-
T Consensus 238 P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 238 PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence 11122334556779999999999999999999999999999999863
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.4e-21 Score=129.45 Aligned_cols=155 Identities=17% Similarity=0.193 Sum_probs=132.1
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
..+.+|.++|.+++|+-+ |++.++|+.|.+|++|+...+..++++.- +...|..++.+.++..++++ +
T Consensus 11 ~~l~~~qgaV~avryN~d--GnY~ltcGsdrtvrLWNp~rg~liktYsg-----hG~EVlD~~~s~Dnskf~s~GgDk~v 83 (307)
T KOG0316|consen 11 SILDCAQGAVRAVRYNVD--GNYCLTCGSDRTVRLWNPLRGALIKTYSG-----HGHEVLDAALSSDNSKFASCGGDKAV 83 (307)
T ss_pred eeecccccceEEEEEccC--CCEEEEcCCCceEEeecccccceeeeecC-----CCceeeeccccccccccccCCCCceE
Confidence 457899999999999999 99999999999999999988876655542 25678888888888888765 8
Q ss_pred EEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG 165 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 165 (197)
.+|| ++.+. +|...|+.++|+ ...+ ++|+.|..+++||.++ ...++++.+......|.++... +
T Consensus 84 ~vwDV~TGkv~Rr~r-gH~aqVNtV~fNeesSVv--~SgsfD~s~r~wDCRS---~s~ePiQildea~D~V~Si~v~--~ 155 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFR-GHLAQVNTVRFNEESSVV--ASGSFDSSVRLWDCRS---RSFEPIQILDEAKDGVSSIDVA--E 155 (307)
T ss_pred EEEEcccCeeeeecc-cccceeeEEEecCcceEE--EeccccceeEEEEccc---CCCCccchhhhhcCceeEEEec--c
Confidence 9999 77788 999999999999 5555 9999999999999987 3356777787778889888885 7
Q ss_pred CEEEEEeCCCcEEEEEcCCCcch
Q psy13207 166 TIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 166 ~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
..+++||.||+++.||++.+...
T Consensus 156 heIvaGS~DGtvRtydiR~G~l~ 178 (307)
T KOG0316|consen 156 HEIVAGSVDGTVRTYDIRKGTLS 178 (307)
T ss_pred cEEEeeccCCcEEEEEeecceee
Confidence 78999999999999999987643
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=152.79 Aligned_cols=153 Identities=16% Similarity=0.210 Sum_probs=136.9
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
.|..-++.|..++|+|. .-.++++-..|.|.+||.+.+..+..|. +++.+|..+.|+|+...++++ |+
T Consensus 4 kfEskSsRvKglsFHP~--rPwILtslHsG~IQlWDYRM~tli~rFd-----eHdGpVRgv~FH~~qplFVSGGDDykIk 76 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPK--RPWILTSLHSGVIQLWDYRMGTLIDRFD-----EHDGPVRGVDFHPTQPLFVSGGDDYKIK 76 (1202)
T ss_pred hhhcccccccceecCCC--CCEEEEeecCceeeeehhhhhhHHhhhh-----ccCCccceeeecCCCCeEEecCCccEEE
Confidence 45566788999999998 8999999999999999999886654443 347899999999999999887 89
Q ss_pred EEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 95 MYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 95 ~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
+|+ +.++. +|-..|+.+.|++.+-+++++|.|.+|++|+..+ .+++..+.||...|.|..|+|...++
T Consensus 77 VWnYk~rrclftL~-GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs-----r~~iavltGHnHYVMcAqFhptEDlI 150 (1202)
T KOG0292|consen 77 VWNYKTRRCLFTLL-GHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS-----RKCIAVLTGHNHYVMCAQFHPTEDLI 150 (1202)
T ss_pred EEecccceehhhhc-cccceeEEeeccCCCceEEEccCCCeEEEEeccC-----CceEEEEecCceEEEeeccCCccceE
Confidence 999 66777 9999999999998888889999999999999966 88999999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCC
Q psy13207 169 ASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~~ 185 (197)
+++|.|.+|++||+.-.
T Consensus 151 VSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 151 VSASLDQTVRVWDISGL 167 (1202)
T ss_pred EEecccceEEEEeecch
Confidence 99999999999999643
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-22 Score=153.47 Aligned_cols=136 Identities=15% Similarity=0.295 Sum_probs=114.8
Q ss_pred ccccccceeeeee--------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 7 QSEKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
...+.+..|++.. .|..|...++++.|++.. ..+|+|||+||+|++||++..+....+.
T Consensus 107 s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~te-p~iliSGSQDg~vK~~DlR~~~S~~t~~------------ 173 (839)
T KOG0269|consen 107 STNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTE-PNILISGSQDGTVKCWDLRSKKSKSTFR------------ 173 (839)
T ss_pred cCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCC-ccEEEecCCCceEEEEeeeccccccccc------------
Confidence 4567888998765 477899999999999863 6899999999999999999876543222
Q ss_pred eEEEccCCCcccceeEEEEeeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceec
Q psy13207 79 CLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCT 155 (197)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~ 155 (197)
+....|+.++|+ ++.+ +++.+.|.+++||+|.. ..+...+.+|.++
T Consensus 174 -------------------------~nSESiRDV~fsp~~~~~F--~s~~dsG~lqlWDlRqp----~r~~~k~~AH~Gp 222 (839)
T KOG0269|consen 174 -------------------------SNSESIRDVKFSPGYGNKF--ASIHDSGYLQLWDLRQP----DRCEKKLTAHNGP 222 (839)
T ss_pred -------------------------ccchhhhceeeccCCCceE--EEecCCceEEEeeccCc----hhHHHHhhcccCc
Confidence 456778888888 5556 99999999999999853 5677888999999
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 156 VWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|.|+.|+|++.+|||||.|+.|+|||+...+
T Consensus 223 V~c~nwhPnr~~lATGGRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 223 VLCLNWHPNREWLATGGRDKMVKIWDMTDSR 253 (839)
T ss_pred eEEEeecCCCceeeecCCCccEEEEeccCCC
Confidence 9999999999999999999999999997644
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-20 Score=134.65 Aligned_cols=161 Identities=23% Similarity=0.301 Sum_probs=128.2
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.++.+|.++|.++.|+|+ +++|++++.||.+++|++.+.+...... .+...+..+.|.|+++.++++ +
T Consensus 3 ~~~~~h~~~i~~~~~~~~--~~~l~~~~~~g~i~i~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPD--GKLLATGSGDGTIKVWDLETGELLRTLK-----GHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred hHhcccCCCEEEEEEcCC--CCEEEEeecCcEEEEEEeeCCCcEEEEe-----cCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 457789999999999998 9999999999999999998765322211 124567899999999777654 7
Q ss_pred EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
.+|+ +..+. .|...+.++.|+++.-++++++.|+.+++||+++ .+....+..|...+.+++|+|++.+
T Consensus 76 ~i~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~ 149 (289)
T cd00200 76 RLWDLETGECVRTLT-GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET-----GKCLTTLRGHTDWVNSVAFSPDGTF 149 (289)
T ss_pred EEEEcCcccceEEEe-ccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC-----cEEEEEeccCCCcEEEEEEcCcCCE
Confidence 8999 44455 7888999999995332337777799999999975 5666777788889999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+++++.|+.|++||++..+....+.
T Consensus 150 l~~~~~~~~i~i~d~~~~~~~~~~~ 174 (289)
T cd00200 150 VASSSQDGTIKLWDLRTGKCVATLT 174 (289)
T ss_pred EEEEcCCCcEEEEEccccccceeEe
Confidence 9988889999999998766554443
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-21 Score=147.28 Aligned_cols=174 Identities=16% Similarity=0.190 Sum_probs=142.0
Q ss_pred cccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..+.++++|+... .+.+|.+.|+++++... +.+|++|+.|.++++||..++.....+.. +...+.+
T Consensus 224 ~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~--~~~lvsgS~D~t~rvWd~~sg~C~~~l~g-----h~stv~~ 296 (537)
T KOG0274|consen 224 GSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSG--GDKLVSGSTDKTERVWDCSTGECTHSLQG-----HTSSVRC 296 (537)
T ss_pred cCCCceeEEeecccceEEEeeccCCCCCceeEEEecC--CCEEEEEecCCcEEeEecCCCcEEEEecC-----CCceEEE
Confidence 45667778887543 38899999999999875 78999999999999999999876544431 1455666
Q ss_pred EEEccCCCc---ccceeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 80 LTWNHSFSR---FNSISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 80 ~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
+...+.... ....+++|+ +..+. +|...|+++..+.+.+ ++|+.|++|++||..+ .+++..+.
T Consensus 297 ~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~-~h~~~V~~v~~~~~~l--vsgs~d~~v~VW~~~~-----~~cl~sl~ 368 (537)
T KOG0274|consen 297 LTIDPFLLVSGSRDNTVKVWDVTNGACLNLLR-GHTGPVNCVQLDEPLL--VSGSYDGTVKVWDPRT-----GKCLKSLS 368 (537)
T ss_pred EEccCceEeeccCCceEEEEeccCcceEEEec-cccccEEEEEecCCEE--EEEecCceEEEEEhhh-----ceeeeeec
Confidence 665543322 234589999 66676 7999999999998888 9999999999999986 89999999
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-cchhhhhhhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK-RKKKKEEEEE 195 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~ 195 (197)
+|..+|.++.+.+. .++++|+.|++|++||+++. +++..+..+.
T Consensus 369 gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~ 413 (537)
T KOG0274|consen 369 GHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHT 413 (537)
T ss_pred CCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCc
Confidence 99999999988755 89999999999999999998 7777665543
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-21 Score=137.92 Aligned_cols=164 Identities=21% Similarity=0.275 Sum_probs=141.7
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce--
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+...+.+|..+|+.+-|+|+ -...+++++|++|++||..+++... .+.+ ...+..++|+..|++++++
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~--~~~v~~as~d~tikv~D~~tg~~e~------~LrGHt~sv~di~~~a~Gk~l~tcSs 170 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPS--EALVVSASEDATIKVFDTETGELER------SLRGHTDSVFDISFDASGKYLATCSS 170 (406)
T ss_pred CchhhhhccccceeeeeeccC--ceEEEEecCCceEEEEEccchhhhh------hhhccccceeEEEEecCccEEEecCC
Confidence 344567899999999999998 8889999999999999999886532 2232 4569999999999998876
Q ss_pred ---eEEEE-------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ---SIMYE-------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ---~~~~~-------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+++|| ++.+. +|...|.+++|- ++.+ ++++.|.+|+.|+..+ +.++..+.+|..+|..++
T Consensus 171 Dl~~~LWd~~~~~~c~ks~~-gh~h~vS~V~f~P~gd~i--lS~srD~tik~We~~t-----g~cv~t~~~h~ewvr~v~ 242 (406)
T KOG0295|consen 171 DLSAKLWDFDTFFRCIKSLI-GHEHGVSSVFFLPLGDHI--LSCSRDNTIKAWECDT-----GYCVKTFPGHSEWVRMVR 242 (406)
T ss_pred ccchhheeHHHHHHHHHHhc-CcccceeeEEEEecCCee--eecccccceeEEeccc-----ceeEEeccCchHhEEEEE
Confidence 68899 55666 899999999998 7777 9999999999999988 899999999999999999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
.+.||.++|+++.|.++++|-+.++.+...+-+||
T Consensus 243 v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hE 277 (406)
T KOG0295|consen 243 VNQDGTIIASCSNDQTLRVWVVATKQCKAELREHE 277 (406)
T ss_pred ecCCeeEEEecCCCceEEEEEeccchhhhhhhccc
Confidence 99999999999999999999999987666655554
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-20 Score=129.78 Aligned_cols=174 Identities=13% Similarity=0.157 Sum_probs=133.7
Q ss_pred CCcccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 4 SPLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
++...|.++|.-++.. -|.||...|+.++.+|- ++.+++++.|++|++||++..+...-.. ...-.
T Consensus 74 sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~--~d~FlS~S~D~tvrLWDlR~~~cqg~l~-------~~~~p 144 (311)
T KOG1446|consen 74 SSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPK--DDTFLSSSLDKTVRLWDLRVKKCQGLLN-------LSGRP 144 (311)
T ss_pred ccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCC--CCeEEecccCCeEEeeEecCCCCceEEe-------cCCCc
Confidence 3445667777776653 48899999999999998 8899999999999999999766543222 22345
Q ss_pred eEEEccCCCcccce-----eEEEEeeEec----------ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYEAHSIN----------AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.++|+|+|-.+|.+ |++||++.+. .....+.+.+.|+++.-.++.++..+.+++.|.-. +
T Consensus 145 i~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~-----G 219 (311)
T KOG1446|consen 145 IAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFD-----G 219 (311)
T ss_pred ceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccC-----C
Confidence 78999999998876 7999955442 12346678999994444448899999999999854 6
Q ss_pred eeeeeecCceecE---EEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 144 ETIGNFEDHYCTV---WRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 144 ~~~~~~~~h~~~v---~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.....+..+...- ...+|.||++++++|+.||+|.+|+++++.++...
T Consensus 220 ~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~ 270 (311)
T KOG1446|consen 220 TVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVL 270 (311)
T ss_pred cEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEe
Confidence 6666776654432 57899999999999999999999999988765443
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-21 Score=138.43 Aligned_cols=172 Identities=17% Similarity=0.267 Sum_probs=135.6
Q ss_pred cccccccceeeeee------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-
Q psy13207 6 LQSEKCLNQWTRRS------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA- 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~- 72 (197)
+..++++..|++.. .+.+|.+.|..++|+|.+ ..+|++++.|+.+.|||+++... +..+...
T Consensus 196 ~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h-~~lF~sv~dd~~L~iwD~R~~~~----~~~~~~~a 270 (422)
T KOG0264|consen 196 GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLH-EDLFGSVGDDGKLMIWDTRSNTS----KPSHSVKA 270 (422)
T ss_pred ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccc-hhhheeecCCCeEEEEEcCCCCC----CCcccccc
Confidence 56778888998653 377999999999999963 67899999999999999997311 1222223
Q ss_pred cCCCeeeEEEccCCCcc-cce-----eEEEE-------eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCC
Q psy13207 73 CPTLASCLTWNHSFSRF-NSI-----SIMYE-------AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~ 138 (197)
+...+.|++|+|-+.++ |++ +.+|| ++.+. +|...|.++.|+| +.-.|++++.|+.+.+||+...
T Consensus 271 h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e-~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~i 349 (422)
T KOG0264|consen 271 HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFE-GHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRI 349 (422)
T ss_pred cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceecc-CCCcceEEEEeCCCCCceeEecccCCcEEEEecccc
Confidence 37899999999988775 433 79999 66777 8999999999993 3334499999999999999642
Q ss_pred c---------ccceeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcC
Q psy13207 139 T---------RFDIETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 139 ~---------~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~ 183 (197)
. .-..++++.-.||...|..++|+|+. ..+++.+.|+.+.||++.
T Consensus 350 g~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 350 GEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 1 11235567778999999999999975 567788899999999987
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-21 Score=145.45 Aligned_cols=173 Identities=15% Similarity=0.182 Sum_probs=143.3
Q ss_pred Ccccccccceeeeee-------eecCCCcceeEEEE-CCCCCCcEEEEEeCCCcEEEEEcCCccc--cccee---cccee
Q psy13207 5 PLQSEKCLNQWTRRS-------NLVDSRTSVTDVKF-GPKQLGLVLATCAADGLVRIYEAPDVMN--LSQWC---LQHEV 71 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~-~~~~~~~~l~s~~~dg~v~iw~~~~~~~--~~~~~---~~~~~ 71 (197)
+...|-+|+.|+... ++..|.+.|.|++. -++ ...+|||+-|+.|.+||++++.. +..+. .....
T Consensus 90 S~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~--~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~ 167 (735)
T KOG0308|consen 90 SASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKN--NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLG 167 (735)
T ss_pred EecCCceEEEeecccCcchhHhhhhcccchheeeeecccC--ceeEEecCCCccEEEEEccCcchhhhhhccccccccCC
Confidence 346788999998764 46789999999999 665 88999999999999999997732 22222 11111
Q ss_pred -ccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc
Q psy13207 72 -ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
.++.++.+++.++.+..++++ +++|| +..+. +|...|+++..+.+.-+++++++||+|++||+..
T Consensus 168 sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq-- 244 (735)
T KOG0308|consen 168 SGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ-- 244 (735)
T ss_pred CCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEEcCCCCeEeecCCCceEEeeeccc--
Confidence 226789999999999777766 89999 66677 9999999999994433339999999999999976
Q ss_pred ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..++.++..|...|+++..+|+-.++++|+.||.|..=|+++.
T Consensus 245 ---QrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 245 ---QRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ---cceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 7889999999999999999999999999999999999999885
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=144.81 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=124.5
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce-----eE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
-+||...++|.+|+|.+ .+.|+|++.||+++||++...+...++.......+ .-+++.++|+++++.+|++ |.
T Consensus 264 TKGHia~lt~g~whP~~-k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 264 TKGHIAELTCGCWHPDN-KEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred cCCceeeeeccccccCc-ccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCcee
Confidence 46899999999999985 67799999999999999987653322211111111 5678999999999998876 79
Q ss_pred EEE--------eeEecccCCC--ceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce--ecEEEEE
Q psy13207 95 MYE--------AHSINAEHKD--LIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY--CTVWRVS 160 (197)
Q Consensus 95 ~~~--------~~~~~~~~~~--~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~--~~v~~~~ 160 (197)
+|+ ...+..+|.. .|++|.|+ ++.| ++-+.|+.+++||+++. .+++....+.. -+-+.++
T Consensus 343 ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~L--lSRg~D~tLKvWDLrq~----kkpL~~~tgL~t~~~~tdc~ 416 (641)
T KOG0772|consen 343 IWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYL--LSRGFDDTLKVWDLRQF----KKPLNVRTGLPTPFPGTDCC 416 (641)
T ss_pred eeecCCcccccceEeeeccCCCCceeEEEeccccchh--hhccCCCceeeeecccc----ccchhhhcCCCccCCCCccc
Confidence 999 2233337876 89999999 7777 99999999999999863 44555544432 2447899
Q ss_pred EccCCCEEEEEeC------CCcEEEEEcCCCcchhhh
Q psy13207 161 WNITGTIVASSGD------DGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 161 ~~p~~~~l~~~~~------dg~i~iw~~~~~~~~~~~ 191 (197)
|||+.++|++|+. .|++.+||..+...+.++
T Consensus 417 FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki 453 (641)
T KOG0772|consen 417 FSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKI 453 (641)
T ss_pred cCCCceEEEecccccCCCCCceEEEEeccceeeEEEe
Confidence 9999999999853 577999998877665544
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.1e-20 Score=142.37 Aligned_cols=167 Identities=13% Similarity=0.152 Sum_probs=119.9
Q ss_pred cccccccceeeeee-------------eecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 6 LQSEKCLNQWTRRS-------------NLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------------~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
+..|+++++|++.. .+.+|...|.+++|+|+ +. .|++++.|++|+|||+++++....+
T Consensus 93 gS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~--g~~iLaSgS~DgtIrIWDl~tg~~~~~i------ 164 (568)
T PTZ00420 93 GSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPM--NYYIMCSSGFDSFVNIWDIENEKRAFQI------ 164 (568)
T ss_pred EeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCC--CCeEEEEEeCCCeEEEEECCCCcEEEEE------
Confidence 56789999999742 36789999999999998 65 5689999999999999887543222
Q ss_pred ccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEE-----EcCCCeEEEEeeCCC----eEE
Q psy13207 72 ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVA-----YDYYGLRMATCSSDQ----NIK 131 (197)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~-----~~~~~~~~~s~~~d~----~i~ 131 (197)
.....+.+++|+|+|..++++ +++|| +..+. +|...+.... |+++.-++++++.|+ .|+
T Consensus 165 ~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~-gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~Vk 243 (568)
T PTZ00420 165 NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFH-IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMK 243 (568)
T ss_pred ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEe-cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEE
Confidence 234579999999999998755 89999 55666 7876654332 333322238877664 799
Q ss_pred EEEccCCcccceeeeee--ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 132 VTRDVMGTRFDIETIGN--FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+||++.. ..++.. +..+...+...-..++|.++++|+.|++|++|++..+
T Consensus 244 LWDlr~~----~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 244 LWDLKNT----TSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred EEECCCC----CCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCC
Confidence 9999852 233333 3333333333333456899999999999999999764
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=133.47 Aligned_cols=168 Identities=14% Similarity=0.145 Sum_probs=129.8
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV--------- 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~--------- 71 (197)
+..|+.+..|++. +.+.||+.++++-+|.|+ |++++++..||+|++||+.++..+.........
T Consensus 166 G~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd--GKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~ 243 (399)
T KOG0296|consen 166 GSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPD--GKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNL 243 (399)
T ss_pred ecCCCcEEEEECCCcceeeEecCCCCCcccccccCC--CceEEEEecCceEEEEecCCCceeEEecccccCcCCcccccc
Confidence 4678888888764 468899999999999999 999999999999999999988654433310000
Q ss_pred ------cc-------------------------------CCCeeeEEEccCCCc---ccce-----eEEEE-----eeEe
Q psy13207 72 ------AC-------------------------------PTLASCLTWNHSFSR---FNSI-----SIMYE-----AHSI 101 (197)
Q Consensus 72 ------~~-------------------------------~~~~~~~~~~~~~~~---~~~~-----~~~~~-----~~~~ 101 (197)
.+ ...+.|+.+.|.... .|++ +.+|| ++..
T Consensus 244 ~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~ 323 (399)
T KOG0296|consen 244 AGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHI 323 (399)
T ss_pred ccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhhee
Confidence 00 011122222222211 1222 58899 4444
Q ss_pred cccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 102 NAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 102 ~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
- .|...|..+.|-+ .++ ++++.+|.|+.||.|+ ++++..+.+|...|.+++++|+.++++++|.|++.++|
T Consensus 324 c-~he~~V~~l~w~~t~~l--~t~c~~g~v~~wDaRt-----G~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF 395 (399)
T KOG0296|consen 324 C-EHEDGVTKLKWLNTDYL--LTACANGKVRQWDART-----GQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVF 395 (399)
T ss_pred c-cCCCceEEEEEcCcchh--eeeccCceEEeeeccc-----cceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEE
Confidence 4 6899999999994 777 9999999999999998 89999999999999999999999999999999999999
Q ss_pred EcC
Q psy13207 181 KLK 183 (197)
Q Consensus 181 ~~~ 183 (197)
++.
T Consensus 396 ~v~ 398 (399)
T KOG0296|consen 396 EVP 398 (399)
T ss_pred ecC
Confidence 875
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=136.99 Aligned_cols=166 Identities=15% Similarity=0.164 Sum_probs=135.2
Q ss_pred CCcccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 4 SPLQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
++++.|+.++.|++. ..+.+|++.|.|.+|+|-+ +..++|||.||+|++||++.... ....+.++.+|.
T Consensus 127 ~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~-~hivvtGsYDg~vrl~DtR~~~~-----~v~elnhg~pVe 200 (487)
T KOG0310|consen 127 VSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPAN-DHIVVTGSYDGKVRLWDTRSLTS-----RVVELNHGCPVE 200 (487)
T ss_pred EecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCC-CeEEEecCCCceEEEEEeccCCc-----eeEEecCCCcee
Confidence 345677788888764 3688999999999999963 67899999999999999987631 234555688999
Q ss_pred eEEEccCCCcccce----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
.+.+-|.|..++++ +++|| +..+. .|...|+|+++..+.-+|++++-|+.|++||..+ .+.+.
T Consensus 201 ~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~-~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~-----~Kvv~ 274 (487)
T KOG0310|consen 201 SVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMF-NHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN-----YKVVH 274 (487)
T ss_pred eEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhh-cccceEEEEEeecCCceEeecccccceEEEEccc-----eEEEE
Confidence 99999999998765 89999 22333 5999999999994334449999999999999765 67777
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
.+. ..++|.+++.+|+++.++.|..||.+.+-+.
T Consensus 275 s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 275 SWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred eee-cccceeeEEecCCCceEEEecccceeeeehh
Confidence 665 4779999999999999999999999988744
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-21 Score=142.08 Aligned_cols=156 Identities=14% Similarity=0.258 Sum_probs=121.0
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceec-c-CCCeeeEEEccCCCcccce----
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVA-C-PTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~---- 92 (197)
.|.+|+..|.++++.|. |..|+||+.|.+|++||+...... +.+. .+. + ...+.++.|++.+..+.+.
T Consensus 162 ~l~hgtk~Vsal~~Dp~--GaR~~sGs~Dy~v~~wDf~gMdas~~~fr---~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a 236 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPS--GARFVSGSLDYTVKFWDFQGMDASMRSFR---QLQPCETHQINSLQYSVTGDQILVVSGSA 236 (641)
T ss_pred eccCCceEEEEeeecCC--CceeeeccccceEEEEecccccccchhhh---ccCcccccccceeeecCCCCeEEEEecCc
Confidence 57899999999999998 999999999999999999865432 2222 222 2 5678999999999886433
Q ss_pred -eEEEE------------------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeee--
Q psy13207 93 -SIMYE------------------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-- 148 (197)
Q Consensus 93 -~~~~~------------------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-- 148 (197)
.+++| +...+ +|...+++.+|+ .+.+ +||+.||++|+||+...... .+.+..
T Consensus 237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTK-GHia~lt~g~whP~~k~~F--lT~s~DgtlRiWdv~~~k~q-~qVik~k~ 312 (641)
T KOG0772|consen 237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTK-GHIAELTCGCWHPDNKEEF--LTCSYDGTLRIWDVNNTKSQ-LQVIKTKP 312 (641)
T ss_pred ceeEEccCCceeeeeeccchhhhhhhccC-CceeeeeccccccCcccce--EEecCCCcEEEEecCCchhh-eeEEeecc
Confidence 56777 44445 899999999999 4566 99999999999999753211 222222
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
..+..-++..++|+|+|+.||+|+.||+|.+|+...
T Consensus 313 ~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~ 348 (641)
T KOG0772|consen 313 AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS 348 (641)
T ss_pred CCCcccCceeeecCCCcchhhhcccCCceeeeecCC
Confidence 223456789999999999999999999999999754
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-21 Score=147.07 Aligned_cols=164 Identities=17% Similarity=0.262 Sum_probs=125.7
Q ss_pred cccccccceeeeeee----ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRRSN----LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~----~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
...|++||+|++... ...|.+-|+|++|+|.+ .++|++||-||.|+||++...+.. .|. ....-|++++
T Consensus 386 SSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvD-DryFiSGSLD~KvRiWsI~d~~Vv-~W~-----Dl~~lITAvc 458 (712)
T KOG0283|consen 386 SSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVD-DRYFISGSLDGKVRLWSISDKKVV-DWN-----DLRDLITAVC 458 (712)
T ss_pred ccccccEEeecCCCcceeeEEecCCeeEEEEecccC-CCcEeecccccceEEeecCcCeeE-eeh-----hhhhhheeEE
Confidence 467899999998642 34799999999999963 789999999999999999876432 121 1146799999
Q ss_pred EccCCCcccce-----eEEEE-----------eeEe---cccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCc
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----------AHSI---NAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----------~~~~---~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
|.|+|+..+.| .++|+ +..- +..|. .|+++.|. ++.+ +..+.|..|||||.+.
T Consensus 459 y~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~v--LVTSnDSrIRI~d~~~-- 533 (712)
T KOG0283|consen 459 YSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEV--LVTSNDSRIRIYDGRD-- 533 (712)
T ss_pred eccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeE--EEecCCCceEEEeccc--
Confidence 99999987665 57777 1111 11133 79999998 5545 8999999999999965
Q ss_pred ccceeeeeeecCce--ecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 140 RFDIETIGNFEDHY--CTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 140 ~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
..++..+++.. ..-....|+.||++|++++.|..|++|++..
T Consensus 534 ---~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 534 ---KDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred ---hhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 45666666643 2335678899999999999999999999743
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.6e-20 Score=149.83 Aligned_cols=157 Identities=20% Similarity=0.295 Sum_probs=119.6
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc-ce-eccceeccCCCeeeEEEccC-CCcccce-----
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS-QW-CLQHEVACPTLASCLTWNHS-FSRFNSI----- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~----- 92 (197)
+..|...|.+++|+|+ |++|++|+.|+.|+||++....... .. .....+.....+.+++|++. +.+++++
T Consensus 479 ~~~~~~~V~~i~fs~d--g~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 479 LLNSSNLVCAIGFDRD--GEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred ccCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCe
Confidence 4468999999999998 9999999999999999986421100 00 01112223567889999875 5566554
Q ss_pred eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc-cC
Q psy13207 93 SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN-IT 164 (197)
Q Consensus 93 ~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~-p~ 164 (197)
+++|| +..+. +|...|.+++|+ .+.-+|++|+.|+.|++||+++ ...+..+..+ ..+.++.|+ ++
T Consensus 557 v~lWd~~~~~~~~~~~-~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~-----~~~~~~~~~~-~~v~~v~~~~~~ 629 (793)
T PLN00181 557 VQVWDVARSQLVTEMK-EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ-----GVSIGTIKTK-ANICCVQFPSES 629 (793)
T ss_pred EEEEECCCCeEEEEec-CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC-----CcEEEEEecC-CCeEEEEEeCCC
Confidence 89999 55666 899999999998 2333339999999999999976 4555555544 578999995 57
Q ss_pred CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 165 GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|.+|++|+.||.|++||+++.+
T Consensus 630 g~~latgs~dg~I~iwD~~~~~ 651 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPK 651 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCC
Confidence 9999999999999999998754
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=131.21 Aligned_cols=158 Identities=18% Similarity=0.217 Sum_probs=126.0
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
+.+|.+.|+.+.|+|+ |..||||+.|..|.+|++.....-. +.+. -++..|+.+.|.+++..++++ ++.
T Consensus 43 l~gh~geI~~~~F~P~--gs~~aSgG~Dr~I~LWnv~gdceN~-~~lk---gHsgAVM~l~~~~d~s~i~S~gtDk~v~~ 116 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPD--GSCFASGGSDRAIVLWNVYGDCENF-WVLK---GHSGAVMELHGMRDGSHILSCGTDKTVRG 116 (338)
T ss_pred cCCCcceEEEEEECCC--CCeEeecCCcceEEEEeccccccce-eeec---cccceeEeeeeccCCCEEEEecCCceEEE
Confidence 6789999999999998 9999999999999999975432110 1111 237899999999999998765 899
Q ss_pred EE------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 96 YE------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 96 ~~------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
|| .+.+. +|..-++.+.-+ +..+ .+++.|+++++||+++ ...+..+.. .-.++++.|..++.
T Consensus 117 wD~~tG~~~rk~k-~h~~~vNs~~p~rrg~~lv--~SgsdD~t~kl~D~R~-----k~~~~t~~~-kyqltAv~f~d~s~ 187 (338)
T KOG0265|consen 117 WDAETGKRIRKHK-GHTSFVNSLDPSRRGPQLV--CSGSDDGTLKLWDIRK-----KEAIKTFEN-KYQLTAVGFKDTSD 187 (338)
T ss_pred Eecccceeeehhc-cccceeeecCccccCCeEE--EecCCCceEEEEeecc-----cchhhcccc-ceeEEEEEeccccc
Confidence 99 55666 788888888855 5555 9999999999999986 455555432 45789999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
.+.+|+-|+.|++||+++......+..
T Consensus 188 qv~sggIdn~ikvWd~r~~d~~~~lsG 214 (338)
T KOG0265|consen 188 QVISGGIDNDIKVWDLRKNDGLYTLSG 214 (338)
T ss_pred ceeeccccCceeeeccccCcceEEeec
Confidence 999999999999999987665544443
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-20 Score=134.05 Aligned_cols=177 Identities=15% Similarity=0.177 Sum_probs=137.3
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..+..+++|.... ....|..+|+.+..+|. |++|++++.|++..+.|++++..+...... ...-.++++
T Consensus 279 aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~t--geYllsAs~d~~w~Fsd~~~g~~lt~vs~~---~s~v~~ts~ 353 (506)
T KOG0289|consen 279 ASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPT--GEYLLSASNDGTWAFSDISSGSQLTVVSDE---TSDVEYTSA 353 (506)
T ss_pred cCCcceEEeeccccccCccccccccccceeeeeccC--CcEEEEecCCceEEEEEccCCcEEEEEeec---cccceeEEe
Confidence 45567788887542 46789999999999999 999999999999999999998765432211 124568999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+|+|||..|.++ +++|| +..|. +|.++|..|+|+.+..+|+++++|+.|++||+|.. +....+
T Consensus 354 ~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fp-ght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl-----~n~kt~ 427 (506)
T KOG0289|consen 354 AFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFP-GHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL-----KNFKTI 427 (506)
T ss_pred eEcCCceEEeccCCCceEEEEEcCCccccccCC-CCCCceeEEEeccCceEEEEEecCCeEEEEEehhh-----ccccee
Confidence 999999998776 79999 77788 89999999999966666799999999999999862 223332
Q ss_pred cC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 150 ED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 150 ~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
.- ....+.+++|.+.|++|+.++.|=.|++++-. .+.|.++...
T Consensus 428 ~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~-~k~W~~~~~~ 472 (506)
T KOG0289|consen 428 QLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKK-TKSWTEIKEL 472 (506)
T ss_pred eccccccceeEEEcCCCCeEEeecceeEEEEEecc-cccceeeehh
Confidence 22 12378999999999999999877666666533 3567666543
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-21 Score=135.03 Aligned_cols=182 Identities=14% Similarity=0.232 Sum_probs=139.8
Q ss_pred Ccccccccceeeeee-------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 5 PLQSEKCLNQWTRRS-------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
++..||.+..|+... .|--|.++|.|+.|+.+ .+.||+|+.||.|++|.+.++..++.+...+
T Consensus 230 sgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRD--sEMlAsGsqDGkIKvWri~tG~ClRrFdrAH-- 305 (508)
T KOG0275|consen 230 SGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRD--SEMLASGSQDGKIKVWRIETGQCLRRFDRAH-- 305 (508)
T ss_pred eccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeeccc--HHHhhccCcCCcEEEEEEecchHHHHhhhhh--
Confidence 467788889997542 23347889999999999 9999999999999999999999887765444
Q ss_pred ccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCC
Q psy13207 72 ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~ 138 (197)
...++|+.|+.++..+.++ +++-- ++.+. +|.+.|+...|. ++.+ ++++.||+|++|+.++.
T Consensus 306 --tkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfr-GHsSyvn~a~ft~dG~~i--isaSsDgtvkvW~~Ktt 380 (508)
T KOG0275|consen 306 --TKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFR-GHSSYVNEATFTDDGHHI--ISASSDGTVKVWHGKTT 380 (508)
T ss_pred --ccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhc-CccccccceEEcCCCCeE--EEecCCccEEEecCcch
Confidence 5789999999999887655 34433 66777 999999999999 6666 99999999999988752
Q ss_pred cc---------------------------------------cceeeeeeecC---ceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 139 TR---------------------------------------FDIETIGNFED---HYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 139 ~~---------------------------------------~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
.+ .+++.++.+.. ..+...+.+.+|.|.++++.+.|+.
T Consensus 381 eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~v 460 (508)
T KOG0275|consen 381 ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGV 460 (508)
T ss_pred hhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcE
Confidence 11 01112222211 1234556788999999999999999
Q ss_pred EEEEEcCCCcchhhhhhhh
Q psy13207 177 VRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 177 i~iw~~~~~~~~~~~~~~~ 195 (197)
++.|.+.+++.-.++..+|
T Consensus 461 lYCF~~~sG~LE~tl~VhE 479 (508)
T KOG0275|consen 461 LYCFSVLSGKLERTLPVHE 479 (508)
T ss_pred EEEEEeecCceeeeeeccc
Confidence 9999999887666655544
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=150.25 Aligned_cols=168 Identities=15% Similarity=0.260 Sum_probs=139.9
Q ss_pred ccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeE
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (197)
..+..+.+|.... .|.+|.++|.++.|++. ..+|++|+.+|+|++||+...+..++ +.+ ...+.++
T Consensus 47 g~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~--E~LlaagsasgtiK~wDleeAk~vrt------Ltgh~~~~~sv 118 (825)
T KOG0267|consen 47 GEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTS--ERLLAAGSASGTIKVWDLEEAKIVRT------LTGHLLNITSV 118 (825)
T ss_pred CCceeeccccccCCchhheeeccCCcceeeecCcc--hhhhcccccCCceeeeehhhhhhhhh------hhccccCccee
Confidence 3444555665443 37899999999999998 88999999999999999998765443 222 4678889
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+|.+.+++.+ +.+|| .+.+. +|...+..++|+|+.-+++++++|..+++||... ++....|
T Consensus 119 ~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~-s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a-----gk~~~ef 192 (825)
T KOG0267|consen 119 DFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYK-SHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA-----GKLSKEF 192 (825)
T ss_pred eeccceEEeccccccccceehhhhccCceeeec-CCcceeEEEeecCCCceeeccCCcceeeeecccc-----ccccccc
Confidence 999999998655 79999 55666 7888899999996655559999999999999976 7888999
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+|...+..+.|+|..-++++|+.|+++++||+++...+
T Consensus 193 ~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I 231 (825)
T KOG0267|consen 193 KSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVI 231 (825)
T ss_pred ccccccccccccCchhhhhccCCCCceeeeeccceeEEe
Confidence 999999999999999999999999999999999865443
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=134.62 Aligned_cols=159 Identities=18% Similarity=0.190 Sum_probs=131.9
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce-----e
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+..|.+.|+.+.|+++ |++|||++.|.+..||.+..... +++.+++.+ ..+|.-+.|+||.+++.++ +
T Consensus 219 il~~htdEVWfl~FS~n--GkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~ 293 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHN--GKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVL 293 (519)
T ss_pred hHhhCCCcEEEEEEcCC--CeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCCCeEEecCchHhe
Confidence 47789999999999999 99999999999999999876543 555666665 7899999999999998765 7
Q ss_pred EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEccCCC
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNITGT 166 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~ 166 (197)
.+|| ...++.++...+.+++|.|+.++|++|+.|+.+..||++ +......++-. ..|.+++..+||+
T Consensus 294 ~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD------gn~~~~W~gvr~~~v~dlait~Dgk 367 (519)
T KOG0293|consen 294 SLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD------GNILGNWEGVRDPKVHDLAITYDGK 367 (519)
T ss_pred eeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC------cchhhcccccccceeEEEEEcCCCc
Confidence 9999 444443566789999999888888999999999999997 34444444432 5689999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcchh
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
++++.+.|..|++++..+.....
T Consensus 368 ~vl~v~~d~~i~l~~~e~~~dr~ 390 (519)
T KOG0293|consen 368 YVLLVTVDKKIRLYNREARVDRG 390 (519)
T ss_pred EEEEEecccceeeechhhhhhhc
Confidence 99999999999999987755443
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-20 Score=128.70 Aligned_cols=163 Identities=16% Similarity=0.219 Sum_probs=131.6
Q ss_pred cccccccceee-----eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWT-----RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~-----~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..||.+-+|+ +...+++|.+.|+.++.+|. +.+-++.+.|+.+++||+-.++.-....+ +...+.+
T Consensus 103 ~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS--~KLALsVg~D~~lr~WNLV~Gr~a~v~~L------~~~at~v 174 (362)
T KOG0294|consen 103 GSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPS--GKLALSVGGDQVLRTWNLVRGRVAFVLNL------KNKATLV 174 (362)
T ss_pred ecCCCcEEEEEcCCeEEeeeecccccccceeEecCC--CceEEEEcCCceeeeehhhcCccceeecc------CCcceee
Confidence 56778877665 45789999999999999999 99999999999999999988764322222 3345669
Q ss_pred EEccCCCcccce----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+|.|.+++.. +.+|. ...+ .....+.++.|. +..+ ++|.+|+.|++||... ..+...+
T Consensus 175 ~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i--~~~~r~l~~~~l~~~~L--~vG~d~~~i~~~D~ds-----~~~~~~~ 245 (362)
T KOG0294|consen 175 SWSPQGDHFVVSGRNKIDIYQLDNASVFREI--ENPKRILCATFLDGSEL--LVGGDNEWISLKDTDS-----DTPLTEF 245 (362)
T ss_pred EEcCCCCEEEEEeccEEEEEecccHhHhhhh--hccccceeeeecCCceE--EEecCCceEEEeccCC-----Cccceee
Confidence 999999987665 57777 1122 234568888887 8888 9999999999999976 6788899
Q ss_pred cCceecEEEEEE--ccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 150 EDHYCTVWRVSW--NITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 150 ~~h~~~v~~~~~--~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.+|..+|-++.+ .|++.+|+++|.||.|++||++..
T Consensus 246 ~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 246 LAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 999999999985 467899999999999999999865
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=126.93 Aligned_cols=172 Identities=20% Similarity=0.318 Sum_probs=129.7
Q ss_pred ccccccceeeee--------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 7 QSEKCLNQWTRR--------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 7 ~~~~~~~~w~~~--------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
.+|+++|++.+. .+|.+|.+||..+.|..-..|.+||+++.||.|.||.-..++ |....... ++..+
T Consensus 30 sSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~----w~k~~e~~~h~~SV 105 (299)
T KOG1332|consen 30 SSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR----WTKAYEHAAHSASV 105 (299)
T ss_pred cCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCc----hhhhhhhhhhcccc
Confidence 578888888654 468999999999999652239999999999999999987663 33222222 37789
Q ss_pred eeEEEccCCC--cccce-----eEEEE--------eeEecccCCCceeEEEEcCC---C-----------eEEEEeeCCC
Q psy13207 78 SCLTWNHSFS--RFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDYY---G-----------LRMATCSSDQ 128 (197)
Q Consensus 78 ~~~~~~~~~~--~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~~---~-----------~~~~s~~~d~ 128 (197)
.+++|.|..- .|+++ +.+.+ ...+...|.-.|++++|.|- . -+|++|+.|.
T Consensus 106 NsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn 185 (299)
T KOG1332|consen 106 NSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDN 185 (299)
T ss_pred eeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCcc
Confidence 9999998754 34443 44444 22233389999999999822 1 2359999999
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccC----CCEEEEEeCCCcEEEEEcCCC
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT----GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~----~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.|+||+..+. +...-..+.+|.+.|..++|.|. ..+||++|.||++.||-.+..
T Consensus 186 ~VkiW~~~~~---~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 186 LVKIWKFDSD---SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred ceeeeecCCc---chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 9999998763 23444558999999999999995 368999999999999987643
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=136.61 Aligned_cols=168 Identities=16% Similarity=0.221 Sum_probs=134.1
Q ss_pred CCcccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 4 SPLQSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
+++..++.+..++++. ++.+|...|..++|+++ +.+||+|+.|+.+.|||......+. ...++...|
T Consensus 274 ssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d--~~~lASGgnDN~~~Iwd~~~~~p~~-----~~~~H~aAV 346 (484)
T KOG0305|consen 274 SSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPD--GNQLASGGNDNVVFIWDGLSPEPKF-----TFTEHTAAV 346 (484)
T ss_pred EEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCC--CCeeccCCCccceEeccCCCccccE-----EEeccceee
Confidence 4567778888887663 37789999999999999 9999999999999999996554332 223347899
Q ss_pred eeEEEccCCCc-ccce-------eEEEE------eeEecccCCCceeEEEEcCC--CeEEEEeeCCCeEEEEEccCCccc
Q psy13207 78 SCLTWNHSFSR-FNSI-------SIMYE------AHSINAEHKDLIHDVAYDYY--GLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 78 ~~~~~~~~~~~-~~~~-------~~~~~------~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
..++|+|-..- ||++ +++|+ +..+ .-...|..|.|++. .+...-|-.++.|.||+..+
T Consensus 347 KA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v--dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps---- 420 (484)
T KOG0305|consen 347 KALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV--DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS---- 420 (484)
T ss_pred eEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc--ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc----
Confidence 99999996554 5544 79999 2222 24578999999933 35223345678999999977
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...+..+.+|...|..++++|||..+++|+.|.++++|++-..
T Consensus 421 -~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 421 -MKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred -cceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 7788899999999999999999999999999999999998664
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-20 Score=145.50 Aligned_cols=160 Identities=19% Similarity=0.284 Sum_probs=129.5
Q ss_pred CCcceeEEEECCCCCCcEEEEEe--CCCcEEEEEcCCccc----ccc-e-ecc-ceeccCCCeeeEEEccCCCcccce--
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCA--ADGLVRIYEAPDVMN----LSQ-W-CLQ-HEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iw~~~~~~~----~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
+...|.+++.+|+ |..++||+ .|+.++||+...-.. ... . ... ....+...+.|+.|+|+|.+||++
T Consensus 12 ~~~~IfSIdv~pd--g~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 12 NEKSIFSIDVHPD--GVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred CCeeEEEEEecCC--ceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 3456999999999 99999999 999999999864310 000 0 011 112237889999999999999988
Q ss_pred ---eEEEE------------------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 93 ---SIMYE------------------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 93 ---~~~~~------------------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
+.+|+ +..+. +|...|..++|+|+..+|++++.|++|.+|+.++ .+.
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~-~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~t-----F~~ 163 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILR-GHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKT-----FEL 163 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEe-cCCCccceeccCCCccEEEEecccceEEEEcccc-----cee
Confidence 67787 44555 8999999999997777779999999999999987 588
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+..+.+|...|-.+.|.|-|+|||+-+.|++|++|+...-+..+.+
T Consensus 164 ~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~I 209 (942)
T KOG0973|consen 164 LKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSI 209 (942)
T ss_pred eeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEee
Confidence 8999999999999999999999999999999999997664433333
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=129.64 Aligned_cols=168 Identities=16% Similarity=0.219 Sum_probs=127.5
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+++.||.|++|++.. ++++|.+.|..+.+.. +.+++++.|.+|+.|.+... ...++.++..+..
T Consensus 84 SGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~----~~~~tvgdDKtvK~wk~~~~-------p~~tilg~s~~~g 152 (433)
T KOG0268|consen 84 SGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ----TSFFTVGDDKTVKQWKIDGP-------PLHTILGKSVYLG 152 (433)
T ss_pred ccccCceEEEEehhhhhhhheeecccCceeeEEecc----cceEEecCCcceeeeeccCC-------cceeeeccccccc
Confidence 578999999999865 6899999999999975 36899999999999997653 2445555666677
Q ss_pred EEEccCCCcccce---eEEEE------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccc-----
Q psy13207 80 LTWNHSFSRFNSI---SIMYE------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFD----- 142 (197)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~----- 142 (197)
+.-+..+..++++ +.||| +..+. --...|.++.|+ .+.| ++|++|+.|.+||+++.+...
T Consensus 153 Idh~~~~~~FaTcGe~i~IWD~~R~~Pv~sms-wG~Dti~svkfNpvETsIL--as~~sDrsIvLyD~R~~~Pl~KVi~~ 229 (433)
T KOG0268|consen 153 IDHHRKNSVFATCGEQIDIWDEQRDNPVSSMS-WGADSISSVKFNPVETSIL--ASCASDRSIVLYDLRQASPLKKVILT 229 (433)
T ss_pred cccccccccccccCceeeecccccCCccceee-cCCCceeEEecCCCcchhe--eeeccCCceEEEecccCCccceeeee
Confidence 7776666666665 67888 44444 345667888888 3444 777788888888887533211
Q ss_pred --------------------------------eeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 143 --------------------------------IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 143 --------------------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..++....+|.+.|.+++|||.|+.+++||.|.+|+||.++.+.
T Consensus 230 mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~ 305 (433)
T KOG0268|consen 230 MRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGH 305 (433)
T ss_pred ccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCc
Confidence 12333445788999999999999999999999999999998654
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=126.65 Aligned_cols=164 Identities=13% Similarity=0.233 Sum_probs=130.0
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc------ccc------cceeccceec-cCCCeeeEEEccCCC
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV------MNL------SQWCLQHEVA-CPTLASCLTWNHSFS 87 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~------~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~ 87 (197)
+..|.+++.+-+|+|+ |.++|||+.|-.|+|.|+... +.+ ..-.+..++. +...|.++.|+|...
T Consensus 108 lt~HK~~cR~aafs~D--G~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 108 LTSHKSPCRAAAFSPD--GSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EeecccceeeeeeCCC--CcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 6689999999999999 999999999999999998722 111 0001122222 267899999999999
Q ss_pred cccce-----eEEEE---------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeee---e
Q psy13207 88 RFNSI-----SIMYE---------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIG---N 148 (197)
Q Consensus 88 ~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~---~ 148 (197)
.|+++ +++|| .+.+. ....|++|.|+ ++++ +.|.....+++||+.+ .++.. .
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~q--d~~~vrsiSfHPsGefl--lvgTdHp~~rlYdv~T-----~QcfvsanP 256 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQ--DTEPVRSISFHPSGEFL--LVGTDHPTLRLYDVNT-----YQCFVSANP 256 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhh--ccceeeeEeecCCCceE--EEecCCCceeEEeccc-----eeEeeecCc
Confidence 98876 78888 22232 45689999999 6666 9999999999999987 33332 3
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
-..|...|+++.+++.|++-+++|.||.|++||=-..+++.++.+..
T Consensus 257 d~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH 303 (430)
T KOG0640|consen 257 DDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAH 303 (430)
T ss_pred ccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhc
Confidence 35689999999999999999999999999999998888888887643
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=125.62 Aligned_cols=165 Identities=18% Similarity=0.274 Sum_probs=120.9
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 97 (197)
-.+.|.+++|+|.. ..+++.+|.||+||+|+++..... ..........++.+++|+.+|..++++ .++||
T Consensus 26 P~DsIS~l~FSP~~-~~~~~A~SWD~tVR~wevq~~g~~---~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 26 PEDSISALAFSPQA-DNLLAAGSWDGTVRIWEVQNSGQL---VPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred cccchheeEecccc-CceEEecccCCceEEEEEecCCcc---cchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 45689999999942 667779999999999999864221 112233347899999999999887665 79999
Q ss_pred ----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcc-------------------------------
Q psy13207 98 ----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTR------------------------------- 140 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~------------------------------- 140 (197)
+..+. .|..+|..+.|- ..+-.|+||+-|++|+.||.|+...
T Consensus 102 ~S~Q~~~v~-~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~v 180 (347)
T KOG0647|consen 102 ASGQVSQVA-AHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAV 180 (347)
T ss_pred cCCCeeeee-ecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEE
Confidence 55666 899999999998 3433459999999999998873211
Q ss_pred ------------------cce-------------------------------eeeeeecCce---------ecEEEEEEc
Q psy13207 141 ------------------FDI-------------------------------ETIGNFEDHY---------CTVWRVSWN 162 (197)
Q Consensus 141 ------------------~~~-------------------------------~~~~~~~~h~---------~~v~~~~~~ 162 (197)
++. ..-+.++.|+ -.|++++|+
T Consensus 181 ynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~Fh 260 (347)
T KOG0647|consen 181 YNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFH 260 (347)
T ss_pred EEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEee
Confidence 000 0111222443 257889999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 163 ITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
|....|++.+.||++.+||-+...+++..+.
T Consensus 261 P~hgtlvTaGsDGtf~FWDkdar~kLk~s~~ 291 (347)
T KOG0647|consen 261 PVHGTLVTAGSDGTFSFWDKDARTKLKTSET 291 (347)
T ss_pred cccceEEEecCCceEEEecchhhhhhhccCc
Confidence 9888999999999999999877666655443
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-19 Score=123.79 Aligned_cols=181 Identities=25% Similarity=0.410 Sum_probs=136.4
Q ss_pred ccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce-eccCCCee
Q psy13207 7 QSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE-VACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~-~~~~~~~~ 78 (197)
..|+.|-+|+-. +....|.+.|++++|.|.+.|-.|++++.||.|.+.+.+.... +..... ..+...+.
T Consensus 77 sYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~---w~t~ki~~aH~~Gvn 153 (299)
T KOG1332|consen 77 SYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG---WTTSKIVFAHEIGVN 153 (299)
T ss_pred ecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCC---ccchhhhhccccccc
Confidence 456666666644 3467899999999999987788999999999999999876511 111111 11266889
Q ss_pred eEEEccC---C-----------Ccccce-----eEEEE--------eeEecccCCCceeEEEEcCCC----eEEEEeeCC
Q psy13207 79 CLTWNHS---F-----------SRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDYYG----LRMATCSSD 127 (197)
Q Consensus 79 ~~~~~~~---~-----------~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~d 127 (197)
+++|.|- | +.|+++ +++|+ -..+. +|...|+.++|.|.. ..+++|+.|
T Consensus 154 sVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~-~H~dwVRDVAwaP~~gl~~s~iAS~SqD 232 (299)
T KOG1332|consen 154 SVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLE-GHKDWVRDVAWAPSVGLPKSTIASCSQD 232 (299)
T ss_pred eeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhh-hcchhhhhhhhccccCCCceeeEEecCC
Confidence 9999986 4 224444 79998 33477 999999999999332 244999999
Q ss_pred CeEEEEEccCC-cccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 128 QNIKVTRDVMG-TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 128 ~~i~~~d~~~~-~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
|++.||..+.. ..++..++.. -...++.++||+.|++|+.++.|+.|.+|.-+..++|+.+.+.
T Consensus 233 g~viIwt~~~e~e~wk~tll~~---f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~Gkw~~v~~~ 297 (299)
T KOG1332|consen 233 GTVIIWTKDEEYEPWKKTLLEE---FPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDGKWEEVGEV 297 (299)
T ss_pred CcEEEEEecCccCccccccccc---CCcceEEEEEeccccEEEEecCCcEEEEEEeCCCCcEEEcccc
Confidence 99999988642 2333444444 3568999999999999999999999999999988899887654
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=140.58 Aligned_cols=168 Identities=18% Similarity=0.236 Sum_probs=140.2
Q ss_pred Ccccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++..|.++++|+.. +.+.+|.+.|.++...+. .+++|+.|.+|++|++.++..+....- +..+|.+
T Consensus 266 sgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~----~~~sgs~D~tVkVW~v~n~~~l~l~~~-----h~~~V~~ 336 (537)
T KOG0274|consen 266 SGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPF----LLVSGSRDNTVKVWDVTNGACLNLLRG-----HTGPVNC 336 (537)
T ss_pred EEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCc----eEeeccCCceEEEEeccCcceEEEecc-----ccccEEE
Confidence 35679999999854 468999999999998765 788999999999999998765433221 4678999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccce-eee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDI-ETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~-~~~ 146 (197)
+..+ +..++++ +.+|+ ++.+. +|...|.++.+.+ +.+ ++|+.|+.|++||+++ . +++
T Consensus 337 v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~-gH~~~V~sl~~~~~~~~--~Sgs~D~~IkvWdl~~-----~~~c~ 406 (537)
T KOG0274|consen 337 VQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLS-GHTGRVYSLIVDSENRL--LSGSLDTTIKVWDLRT-----KRKCI 406 (537)
T ss_pred EEec--CCEEEEEecCceEEEEEhhhceeeeeec-CCcceEEEEEecCcceE--EeeeeccceEeecCCc-----hhhhh
Confidence 9988 5555443 89999 77888 8999999999987 777 9999999999999987 4 788
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
..+.+|..-+..+.+ .+++|++++.|++|++||...++..+.++.
T Consensus 407 ~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 407 HTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred hhhcCCccccccccc--ccceeEeccccccEEEeecccCceeeeecc
Confidence 899999998866665 588999999999999999999888777665
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=125.20 Aligned_cols=174 Identities=13% Similarity=0.209 Sum_probs=132.6
Q ss_pred Ccccccccceeeeeee--------------------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc
Q psy13207 5 PLQSEKCLNQWTRRSN--------------------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ 64 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~~--------------------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 64 (197)
++..|+.+..|+++.. -.+|.-.|..+.|-|-. ...|.+++.|.++++||.++.+....
T Consensus 61 SGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~D-tGmFtssSFDhtlKVWDtnTlQ~a~~ 139 (397)
T KOG4283|consen 61 SGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPID-TGMFTSSSFDHTLKVWDTNTLQEAVD 139 (397)
T ss_pred ecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeec-CceeecccccceEEEeecccceeeEE
Confidence 5678889999987632 13688899999999953 45788999999999999998765444
Q ss_pred eeccceeccCCCeeeEEEccCCC---cccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCe
Q psy13207 65 WCLQHEVACPTLASCLTWNHSFS---RFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQN 129 (197)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~ 129 (197)
|+. +..|.+-+++|-.. .+|++ +++-| -+.+. +|...|.++.|+ .....|++|+.||.
T Consensus 140 F~m------e~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~Ls-GHr~~vlaV~Wsp~~e~vLatgsaDg~ 212 (397)
T KOG4283|consen 140 FKM------EGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLS-GHRDGVLAVEWSPSSEWVLATGSADGA 212 (397)
T ss_pred eec------CceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeec-cccCceEEEEeccCceeEEEecCCCce
Confidence 443 45667777777543 34444 67777 66777 999999999999 56667799999999
Q ss_pred EEEEEccCCc-c---------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGT-R---------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~-~---------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||++..+ . .....+..-.+|.+.|+.++|..++.++++++.|..+++|+..++.
T Consensus 213 irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 213 IRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred EEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 9999997421 0 1111222234688899999999999999999999999999998764
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-20 Score=132.20 Aligned_cols=172 Identities=18% Similarity=0.247 Sum_probs=124.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
...|+..++|++. ++|.+|++.|+++.|... ...+++|+.|.+|++||+.......++-+. ..+..|
T Consensus 237 as~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~--~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~------S~cnDI 308 (459)
T KOG0288|consen 237 ASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLS--HSRVVSGSADRTIKLWDLQKAYCSKTVLPG------SQCNDI 308 (459)
T ss_pred ecCCCceeeeeccchhhhhhhcccccceeeehhhcc--ccceeeccccchhhhhhhhhhheecccccc------ccccce
Confidence 3567888999865 579999999999999886 555999999999999999987655443322 223333
Q ss_pred EEccC---CCcccceeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 81 TWNHS---FSRFNSISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 81 ~~~~~---~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
..++. ..++.-.+++|| ...++ . .+.|+++..+.+...+++++.|.++.+.|+++ .+....+.+
T Consensus 309 ~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~-~-gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt-----~eI~~~~sA 381 (459)
T KOG0288|consen 309 VCSISDVISGHFDKKVRFWDIRSADKTRSVP-L-GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRT-----KEIRQTFSA 381 (459)
T ss_pred EecceeeeecccccceEEEeccCCceeeEee-c-CcceeeEeeccCCeEEeeecCCCceeeeeccc-----ccEEEEeec
Confidence 33211 122333489999 33444 3 34899999885555559999999999999987 333333322
Q ss_pred c----eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 152 H----YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 152 h----~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
. ....+.+.|||++.|+++||.||.|+||++.+++....+.
T Consensus 382 ~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~ 426 (459)
T KOG0288|consen 382 EGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLS 426 (459)
T ss_pred cccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEec
Confidence 1 2237889999999999999999999999999887655544
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=134.63 Aligned_cols=160 Identities=16% Similarity=0.106 Sum_probs=126.0
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
.|..-|.++.++.. .+++.||+. |.|+|||+..............+..++.+.++...|+++.|.++ +.|||
T Consensus 417 ~HGEvVcAvtIS~~--trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWD 493 (705)
T KOG0639|consen 417 AHGEVVCAVTISNP--TRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWD 493 (705)
T ss_pred ccCcEEEEEEecCC--cceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeee
Confidence 58888999999887 788888875 79999999866433222222223337889999999999998554 89999
Q ss_pred eeEec-------ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 AHSIN-------AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 ~~~~~-------~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
+..-. ..-...+.+++.+++.-++++|+.||.|.|||+.+ ...++.+.+|.+.+.||..++||..|-+
T Consensus 494 LAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn-----q~~VrqfqGhtDGascIdis~dGtklWT 568 (705)
T KOG0639|consen 494 LAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISKDGTKLWT 568 (705)
T ss_pred ccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc-----ceeeecccCCCCCceeEEecCCCceeec
Confidence 33222 02234566677776666668999999999999976 7889999999999999999999999999
Q ss_pred EeCCCcEEEEEcCCCcchhh
Q psy13207 171 SGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 171 ~~~dg~i~iw~~~~~~~~~~ 190 (197)
|+.|.+|+.||++.+++..+
T Consensus 569 GGlDntvRcWDlregrqlqq 588 (705)
T KOG0639|consen 569 GGLDNTVRCWDLREGRQLQQ 588 (705)
T ss_pred CCCccceeehhhhhhhhhhh
Confidence 99999999999998776543
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.3e-19 Score=128.91 Aligned_cols=174 Identities=19% Similarity=0.227 Sum_probs=136.2
Q ss_pred ccceeeeeeeecCC-----CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC
Q psy13207 11 CLNQWTRRSNLVDS-----RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS 85 (197)
Q Consensus 11 ~~~~w~~~~~~~~h-----~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (197)
.+..|.+.....-+ .++|.|+.-+|. |.+|+.|+..|.|++|.+.+++.+..+. .+-..|+|+.|+.+
T Consensus 62 ~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~--G~~l~ag~i~g~lYlWelssG~LL~v~~-----aHYQ~ITcL~fs~d 134 (476)
T KOG0646|consen 62 LLHVWEILKKDQVVQYIVLPGPVHALASSNL--GYFLLAGTISGNLYLWELSSGILLNVLS-----AHYQSITCLKFSDD 134 (476)
T ss_pred cccccccCchhhhhhhcccccceeeeecCCC--ceEEEeecccCcEEEEEeccccHHHHHH-----hhccceeEEEEeCC
Confidence 45566555443323 568999999998 9999999899999999999998765442 12468999999999
Q ss_pred CCcccce-----eEEEE---------------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcc---
Q psy13207 86 FSRFNSI-----SIMYE---------------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTR--- 140 (197)
Q Consensus 86 ~~~~~~~-----~~~~~---------------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~--- 140 (197)
+.+++++ +.+|. ++.+. .|.-.|+.+... +..-+++|++.|.++++||+..+.-
T Consensus 135 gs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~-~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlt 213 (476)
T KOG0646|consen 135 GSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFS-DHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLT 213 (476)
T ss_pred CcEEEecCCCccEEEEEEEeecccccCCCccceeeec-cCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEE
Confidence 9999776 78888 56666 788899998887 3445569999999999998762100
Q ss_pred -------------------------------------------------cceeeeeeecCcee--cEEEEEEccCCCEEE
Q psy13207 141 -------------------------------------------------FDIETIGNFEDHYC--TVWRVSWNITGTIVA 169 (197)
Q Consensus 141 -------------------------------------------------~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~ 169 (197)
.....+..+.+|.+ .|+|++.+-||.+|+
T Consensus 214 i~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLl 293 (476)
T KOG0646|consen 214 ITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLL 293 (476)
T ss_pred EecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEE
Confidence 11223344557877 999999999999999
Q ss_pred EEeCCCcEEEEEcCCCcchhhhh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+|+.||.+++||+...+.++.+.
T Consensus 294 SGd~dg~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 294 SGDEDGKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred eeCCCCCEEEEecchHHHHHHHh
Confidence 99999999999999888777665
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=135.02 Aligned_cols=169 Identities=20% Similarity=0.362 Sum_probs=132.2
Q ss_pred cccceeeeee----e-ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc
Q psy13207 10 KCLNQWTRRS----N-LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 10 ~~~~~w~~~~----~-~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
..+.+|+... . ..-+...|+++.|+++ |.+|+.|..+|.|.|||....+.+..+... +...|.+++|..
T Consensus 197 ~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~--G~~LavG~~~g~v~iwD~~~~k~~~~~~~~----h~~rvg~laW~~ 270 (484)
T KOG0305|consen 197 QSVYLWSASSGSVTELCSFGEELVTSVKWSPD--GSHLAVGTSDGTVQIWDVKEQKKTRTLRGS----HASRVGSLAWNS 270 (484)
T ss_pred ceEEEEecCCCceEEeEecCCCceEEEEECCC--CCEEEEeecCCeEEEEehhhccccccccCC----cCceeEEEeccC
Confidence 3566775432 1 2233789999999999 999999999999999999887766544432 367899999993
Q ss_pred CCCcccce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc
Q psy13207 85 SFSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 85 ~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
..+.++ +..+| ...+. +|...|-.++|+++..+|++|+.|+.+.|||... ..+...+..|
T Consensus 271 --~~lssGsr~~~I~~~dvR~~~~~~~~~~-~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~-----~~p~~~~~~H 342 (484)
T KOG0305|consen 271 --SVLSSGSRDGKILNHDVRISQHVVSTLQ-GHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS-----PEPKFTFTEH 342 (484)
T ss_pred --ceEEEecCCCcEEEEEEecchhhhhhhh-cccceeeeeEECCCCCeeccCCCccceEeccCCC-----ccccEEEecc
Confidence 333333 66677 22355 8999999999995555559999999999999954 6778888999
Q ss_pred eecEEEEEEcc-CCCEEEEEe--CCCcEEEEEcCCCcchhhhh
Q psy13207 153 YCTVWRVSWNI-TGTIVASSG--DDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 153 ~~~v~~~~~~p-~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~ 192 (197)
...|.+++|+| ...+||+|+ .|+.|++||..++..+..+.
T Consensus 343 ~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd 385 (484)
T KOG0305|consen 343 TAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD 385 (484)
T ss_pred ceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc
Confidence 99999999999 678999975 79999999999887665543
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=122.42 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=118.3
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
++.+.|......|+++.|+++ |+.+++++.|.+++|||..+++.++.... .+..+..++|......+..+
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~--G~~litss~dDsl~LYd~~~g~~~~ti~s-----kkyG~~~~~Fth~~~~~i~sStk 77 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDD--GLLLITSSEDDSLRLYDSLSGKQVKTINS-----KKYGVDLACFTHHSNTVIHSSTK 77 (311)
T ss_pred ccccccccCCCceeEEEecCC--CCEEEEecCCCeEEEEEcCCCceeeEeec-----ccccccEEEEecCCceEEEccCC
Confidence 444556667889999999999 99999999999999999998876543321 15677888887666554332
Q ss_pred ----eEE---EE---eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ----SIM---YE---AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ----~~~---~~---~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
|+. +| ++.+. +|...|..|+.+ .+.+ ++++.|++|++||++. .++...+..... ..++
T Consensus 78 ~d~tIryLsl~dNkylRYF~-GH~~~V~sL~~sP~~d~F--lS~S~D~tvrLWDlR~-----~~cqg~l~~~~~--pi~A 147 (311)
T KOG1446|consen 78 EDDTIRYLSLHDNKYLRYFP-GHKKRVNSLSVSPKDDTF--LSSSLDKTVRLWDLRV-----KKCQGLLNLSGR--PIAA 147 (311)
T ss_pred CCCceEEEEeecCceEEEcC-CCCceEEEEEecCCCCeE--EecccCCeEEeeEecC-----CCCceEEecCCC--ccee
Confidence 333 33 88899 999999999999 6666 9999999999999986 333333322222 4489
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
|+|+|-++|++...+.|++||++..
T Consensus 148 fDp~GLifA~~~~~~~IkLyD~Rs~ 172 (311)
T KOG1446|consen 148 FDPEGLIFALANGSELIKLYDLRSF 172 (311)
T ss_pred ECCCCcEEEEecCCCeEEEEEeccc
Confidence 9999999999998889999999875
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=129.87 Aligned_cols=162 Identities=23% Similarity=0.428 Sum_probs=121.4
Q ss_pred ccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC
Q psy13207 11 CLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS 85 (197)
Q Consensus 11 ~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (197)
.+.+|+... .+.=-.+.|.++.|+|.. ...|++|+.|+.|.|||+++...++...+ ...-..|+|+|.
T Consensus 168 ~i~IWD~~R~~Pv~smswG~Dti~svkfNpvE-TsILas~~sDrsIvLyD~R~~~Pl~KVi~------~mRTN~IswnPe 240 (433)
T KOG0268|consen 168 QIDIWDEQRDNPVSSMSWGADSISSVKFNPVE-TSILASCASDRSIVLYDLRQASPLKKVIL------TMRTNTICWNPE 240 (433)
T ss_pred eeeecccccCCccceeecCCCceeEEecCCCc-chheeeeccCCceEEEecccCCccceeee------eccccceecCcc
Confidence 355666543 233234678899999963 46788999999999999999876654433 446788999996
Q ss_pred CCcccce-----eEEEE-------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee-c
Q psy13207 86 FSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF-E 150 (197)
Q Consensus 86 ~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~ 150 (197)
+-.+.++ ++.|| +.... +|.+.|.+++|+ ++.+ ++|+.|.+|+||..+.+ ..-..+ .
T Consensus 241 afnF~~a~ED~nlY~~DmR~l~~p~~v~~-dhvsAV~dVdfsptG~Ef--vsgsyDksIRIf~~~~~-----~SRdiYht 312 (433)
T KOG0268|consen 241 AFNFVAANEDHNLYTYDMRNLSRPLNVHK-DHVSAVMDVDFSPTGQEF--VSGSYDKSIRIFPVNHG-----HSRDIYHT 312 (433)
T ss_pred ccceeeccccccceehhhhhhcccchhhc-ccceeEEEeccCCCcchh--ccccccceEEEeecCCC-----cchhhhhH
Confidence 6666554 67777 55555 899999999999 6777 99999999999998642 111111 1
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.-.+.|.|+.||-|.+++++||.|+.|++|..+..++
T Consensus 313 kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 313 KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred hhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence 1135789999999999999999999999998875443
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.3e-19 Score=139.63 Aligned_cols=166 Identities=19% Similarity=0.259 Sum_probs=126.5
Q ss_pred ccccccceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCC
Q psy13207 7 QSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86 (197)
Q Consensus 7 ~~~~~~~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (197)
.....+-.|+....|.+|.+.|..+.|+|+ +.+|++++.|++|.|||.++.+.+..+.- +...|..+.|.|-|
T Consensus 111 g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~--~~~lvS~s~DnsViiwn~~tF~~~~vl~~-----H~s~VKGvs~DP~G 183 (942)
T KOG0973|consen 111 GGAKNVESWKVVSILRGHDSDVLDVNWSPD--DSLLVSVSLDNSVIIWNAKTFELLKVLRG-----HQSLVKGVSWDPIG 183 (942)
T ss_pred ccccccceeeEEEEEecCCCccceeccCCC--ccEEEEecccceEEEEccccceeeeeeec-----ccccccceEECCcc
Confidence 455677889999999999999999999998 99999999999999999988644332221 14456666677777
Q ss_pred Ccccce-----eEEEE----------------------------------------------------------eeEecc
Q psy13207 87 SRFNSI-----SIMYE----------------------------------------------------------AHSINA 103 (197)
Q Consensus 87 ~~~~~~-----~~~~~----------------------------------------------------------~~~~~~ 103 (197)
++|++. +++|+ -..+-
T Consensus 184 ky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~Lv- 262 (942)
T KOG0973|consen 184 KYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLV- 262 (942)
T ss_pred CeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeee-
Confidence 666553 45554 23344
Q ss_pred cCCCceeEEEEc------CCC-----------eEEEEeeCCCeEEEEEccCCcccceeeeeeecC-ceecEEEEEEccCC
Q psy13207 104 EHKDLIHDVAYD------YYG-----------LRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWNITG 165 (197)
Q Consensus 104 ~~~~~i~~~~~~------~~~-----------~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~ 165 (197)
+|.+++.+++|+ +.. ..+|+|+.|+.|-||.... .+++..... -...|.+++|+|||
T Consensus 263 GH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~-----~RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 263 GHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL-----PRPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred cCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC-----CCchhhhhhhhcCceeeeeEcCCC
Confidence 899999999999 111 1448899999999999854 344333221 24689999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCC
Q psy13207 166 TIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 166 ~~l~~~~~dg~i~iw~~~~~ 185 (197)
..|+.+|.||+|.++.+...
T Consensus 338 ~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 338 FSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred CeEEEEecCCeEEEEEcchH
Confidence 99999999999999999764
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=130.21 Aligned_cols=132 Identities=17% Similarity=0.225 Sum_probs=110.9
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (197)
+.||+++|..++|+|.+ .+.+||||+|.+|+||.+.......... .+ +..
T Consensus 77 v~GHt~~vLDi~w~Pfn-D~vIASgSeD~~v~vW~IPe~~l~~~lt--------ep---------------------vv~ 126 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFN-DCVIASGSEDTKVMVWQIPENGLTRDLT--------EP---------------------VVE 126 (472)
T ss_pred ccCccccccccccCccC-CceeecCCCCceEEEEECCCcccccCcc--------cc---------------------eEE
Confidence 57999999999999974 7889999999999999997654322111 12 233
Q ss_pred ecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 101 INAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
+. +|...|.-++|+ .+.+ ++++.|..|.+|++.+ ++.+..+. |...|++++|+.||.+|++++.|..|
T Consensus 127 L~-gH~rrVg~V~wHPtA~NVL--lsag~Dn~v~iWnv~t-----geali~l~-hpd~i~S~sfn~dGs~l~TtckDKkv 197 (472)
T KOG0303|consen 127 LY-GHQRRVGLVQWHPTAPNVL--LSAGSDNTVSIWNVGT-----GEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKV 197 (472)
T ss_pred Ee-ecceeEEEEeecccchhhH--hhccCCceEEEEeccC-----CceeeecC-CCCeEEEEEeccCCceeeeeccccee
Confidence 44 899999999999 6778 9999999999999988 66666666 99999999999999999999999999
Q ss_pred EEEEcCCCcchhhh
Q psy13207 178 RLWKLKKKRKKKKE 191 (197)
Q Consensus 178 ~iw~~~~~~~~~~~ 191 (197)
+|||.++++.+.+.
T Consensus 198 Rv~dpr~~~~v~e~ 211 (472)
T KOG0303|consen 198 RVIDPRRGTVVSEG 211 (472)
T ss_pred EEEcCCCCcEeeec
Confidence 99999998766544
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-18 Score=114.23 Aligned_cols=161 Identities=16% Similarity=0.219 Sum_probs=122.4
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec---cCCCeeeEEEccCC----Ccccce-
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA---CPTLASCLTWNHSF----SRFNSI- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~- 92 (197)
-+.|.+.|+|.+|+|. |+++++|+.|.+|++..++....... .+.++ ++..|..++|..+. ..++++
T Consensus 85 ~khhkgsiyc~~ws~~--geliatgsndk~ik~l~fn~dt~~~~---g~dle~nmhdgtirdl~fld~~~s~~~il~s~g 159 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPC--GELIATGSNDKTIKVLPFNADTCNAT---GHDLEFNMHDGTIRDLAFLDDPESGGAILASAG 159 (350)
T ss_pred ccccCccEEEEEecCc--cCeEEecCCCceEEEEeccccccccc---CcceeeeecCCceeeeEEecCCCcCceEEEecC
Confidence 4568999999999999 99999999999999987765433211 12222 26788999997543 334433
Q ss_pred ---eEEE--E------eeEecccCCCceeEE-EEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--c-----e
Q psy13207 93 ---SIMY--E------AHSINAEHKDLIHDV-AYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--H-----Y 153 (197)
Q Consensus 93 ---~~~~--~------~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h-----~ 153 (197)
.++| | ++.+. +|...|.++ .|++-.+ ++|+.|.+|+.||++- ..++..+.. | .
T Consensus 160 agdc~iy~tdc~~g~~~~a~s-ghtghilalyswn~~m~--~sgsqdktirfwdlrv-----~~~v~~l~~~~~~~gles 231 (350)
T KOG0641|consen 160 AGDCKIYITDCGRGQGFHALS-GHTGHILALYSWNGAMF--ASGSQDKTIRFWDLRV-----NSCVNTLDNDFHDGGLES 231 (350)
T ss_pred CCcceEEEeecCCCCcceeec-CCcccEEEEEEecCcEE--EccCCCceEEEEeeec-----cceeeeccCcccCCCccc
Confidence 3444 4 77788 999999887 5667777 9999999999999986 344444321 1 3
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
..|.+++..|.|++|++|-.|.+..+||++-+..++.+.++
T Consensus 232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~ph 272 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPH 272 (350)
T ss_pred ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCC
Confidence 67999999999999999999999999999988877766554
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.4e-19 Score=123.56 Aligned_cols=174 Identities=20% Similarity=0.317 Sum_probs=130.8
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEE------cCCcccccceec------
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE------APDVMNLSQWCL------ 67 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~------~~~~~~~~~~~~------ 67 (197)
....|.+.++|.++. ++.||.+.|+++.|++. +.++++++.|++..||. +...........
T Consensus 165 tASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s--~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~ 242 (481)
T KOG0300|consen 165 TASADHTARIWSLESGACLATYTGHTGSVNSIKFHNS--GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEH 242 (481)
T ss_pred ecccccceeEEeeccccceeeecccccceeeEEeccc--cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhc
Confidence 346788899998874 57899999999999998 99999999999999997 222110000000
Q ss_pred ----------------------cceec-cCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEE
Q psy13207 68 ----------------------QHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVA 113 (197)
Q Consensus 68 ----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~ 113 (197)
...+. +...+.+..|-..++.++++ -.+|| ++.+. +|....+.++
T Consensus 243 sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~Lt-GHd~ELtHcs 321 (481)
T KOG0300|consen 243 SDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILT-GHDSELTHCS 321 (481)
T ss_pred ccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceecccc-Ccchhccccc
Confidence 00001 12344555565566665554 37888 56666 9999999988
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
-+|..-++++.+.|.+.++||++.. ...+..|++|...|++..|..+.+ +++|+.|.+|++||+++..
T Consensus 322 tHptQrLVvTsSrDtTFRLWDFRea----I~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMR 389 (481)
T KOG0300|consen 322 THPTQRLVVTSSRDTTFRLWDFREA----IQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMR 389 (481)
T ss_pred cCCcceEEEEeccCceeEeccchhh----cceeeeecccccceeEEEEecCCc-eeecCCCceEEEeeecccc
Confidence 8866666699999999999999842 567888999999999999997654 8899999999999998764
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=132.97 Aligned_cols=159 Identities=14% Similarity=0.232 Sum_probs=132.8
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|.++-+|.+. .+|++|.+.|.|+....+ +. ++|||.|.++++|........ ...+...|..+
T Consensus 77 g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~--~~-~iSgSWD~TakvW~~~~l~~~-------l~gH~asVWAv 146 (745)
T KOG0301|consen 77 GGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGED--GT-LISGSWDSTAKVWRIGELVYS-------LQGHTASVWAV 146 (745)
T ss_pred ecccceEEEEecCCCCchhhhhccccceeeeecCCc--Cc-eEecccccceEEecchhhhcc-------cCCcchheeee
Confidence 4566777777654 368999999999998876 76 999999999999987653211 11226688889
Q ss_pred EEccCCCcccce----eEEEE----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 81 TWNHSFSRFNSI----SIMYE----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
..-|++.++..+ |++|. ++++. +|..-|+.+++- ...+ ++|+.||.|++|++. ++++..+.+
T Consensus 147 ~~l~e~~~vTgsaDKtIklWk~~~~l~tf~-gHtD~VRgL~vl~~~~f--lScsNDg~Ir~w~~~------ge~l~~~~g 217 (745)
T KOG0301|consen 147 ASLPENTYVTGSADKTIKLWKGGTLLKTFS-GHTDCVRGLAVLDDSHF--LSCSNDGSIRLWDLD------GEVLLEMHG 217 (745)
T ss_pred eecCCCcEEeccCcceeeeccCCchhhhhc-cchhheeeeEEecCCCe--EeecCCceEEEEecc------Cceeeeeec
Confidence 888988655333 89999 88899 999999999998 5588 999999999999995 788999999
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
|..-|++++..+++..+++++.|++++||+..
T Consensus 218 htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 218 HTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred cceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 99999999988888999999999999999876
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.6e-18 Score=123.92 Aligned_cols=167 Identities=16% Similarity=0.174 Sum_probs=131.1
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
++..|.+++++... .+.+|+.+|..+.|+|. +++.|++|+.|+.+++||+.+... +..+. +...|.|
T Consensus 86 GD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~-d~t~l~s~sDd~v~k~~d~s~a~v------~~~l~~htDYVR~ 158 (487)
T KOG0310|consen 86 GDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQ-DNTMLVSGSDDKVVKYWDLSTAYV------QAELSGHTDYVRC 158 (487)
T ss_pred cCCcCcEEEeccccHHHHHHHhhccCceeEEEeccc-CCeEEEecCCCceEEEEEcCCcEE------EEEecCCcceeEe
Confidence 46778889998443 37899999999999996 378899999999999999988752 22233 2678999
Q ss_pred EEEccCCCcc-cce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRF-NSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~-~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.+|+|....+ +++ +++|| +..+ .|..+|..+.+-|..-+++++ ....|++||+-++ ++.+
T Consensus 159 g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el--nhg~pVe~vl~lpsgs~iasA-gGn~vkVWDl~~G----~qll 231 (487)
T KOG0310|consen 159 GDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL--NHGCPVESVLALPSGSLIASA-GGNSVKVWDLTTG----GQLL 231 (487)
T ss_pred eccccCCCeEEEecCCCceEEEEEeccCCceeEEe--cCCCceeeEEEcCCCCEEEEc-CCCeEEEEEecCC----ceeh
Confidence 9999998864 333 89999 2333 489999999998442212555 4568999999753 5666
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+..|...|+|+++..+++.|++++.|+.+++||+.+.+
T Consensus 232 ~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~K 271 (487)
T KOG0310|consen 232 TSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYK 271 (487)
T ss_pred hhhhcccceEEEEEeecCCceEeecccccceEEEEccceE
Confidence 6666799999999999999999999999999999976544
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-18 Score=120.93 Aligned_cols=177 Identities=12% Similarity=0.210 Sum_probs=132.0
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
+.+++++|+... .++++...++.++|..+.....+.+|+.||+|++||++.......+...... +.+..|++.
T Consensus 48 Sngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~--~~~f~~ld~ 125 (376)
T KOG1188|consen 48 SNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQS--GTPFICLDL 125 (376)
T ss_pred cCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCC--CCcceEeec
Confidence 567888888765 5889999999999987423678999999999999999987654433222111 356677776
Q ss_pred ccCCCcccce---------eEEEE-------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 83 NHSFSRFNSI---------SIMYE-------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 83 ~~~~~~~~~~---------~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
...+..++++ +.+|| +..+...|...|++++|+ |+.+ +||+.||.|.+||++... +.
T Consensus 126 nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlL--lSGSvDGLvnlfD~~~d~--Ee 201 (376)
T KOG1188|consen 126 NCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLL--LSGSVDGLVNLFDTKKDN--EE 201 (376)
T ss_pred cCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeE--EeecccceEEeeecCCCc--ch
Confidence 6566665544 68899 344445899999999999 7888 999999999999997531 11
Q ss_pred eeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
..+.....|...|.++.|..++ +.+.+-+..++..+|+++.+.+...
T Consensus 202 DaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~ 249 (376)
T KOG1188|consen 202 DALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETW 249 (376)
T ss_pred hhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhc
Confidence 2233334567789999999876 5688999999999999988764433
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=119.89 Aligned_cols=155 Identities=14% Similarity=0.250 Sum_probs=120.0
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceeccCCCeeeEEEcc--CCCcccce----eEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVACPTLASCLTWNH--SFSRFNSI----SIM 95 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~ 95 (197)
.+-+.|.|+.|.|+ +..+++-. |..|.+|++.....+ ..+......+.....++-+|+| ++..+++. ++.
T Consensus 121 eavg~i~cvew~Pn--s~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~ 197 (370)
T KOG1007|consen 121 EAVGKINCVEWEPN--SDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQF 197 (370)
T ss_pred HHhCceeeEEEcCC--CCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEE
Confidence 45568999999998 88888776 889999999876553 2222222233355678899998 55566543 799
Q ss_pred EEeeEe------cccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC-CCE
Q psy13207 96 YEAHSI------NAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT-GTI 167 (197)
Q Consensus 96 ~~~~~~------~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~ 167 (197)
||+++. ..+|...++.+.|+|+. -.|++|+.||.|++||.+.. ..++.++.+|..+|+++.|+|. .++
T Consensus 198 ~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t----k~pv~el~~HsHWvW~VRfn~~hdqL 273 (370)
T KOG1007|consen 198 WDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT----KFPVQELPGHSHWVWAVRFNPEHDQL 273 (370)
T ss_pred EEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCC----CccccccCCCceEEEEEEecCccceE
Confidence 994433 34788999999999433 34499999999999999853 5678899999999999999994 678
Q ss_pred EEEEeCCCcEEEEEcCC
Q psy13207 168 VASSGDDGCVRLWKLKK 184 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~ 184 (197)
+++|+.|..|.+|....
T Consensus 274 iLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 274 ILSGGSDSAVNLSCASS 290 (370)
T ss_pred EEecCCCceeEEEeccc
Confidence 89999999999997754
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=119.38 Aligned_cols=167 Identities=14% Similarity=0.245 Sum_probs=123.0
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc--ce--------eccceeccCCCeeeEEEccCCCcccc
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS--QW--------CLQHEVACPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (197)
..|.+.|+++...+.. |+++++|+.||.|.+||++...... -+ ..++.-.++..|.++.|-|-..-+++
T Consensus 40 r~HgGsvNsL~id~te-grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTE-GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred ccCCCccceeeecccc-ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 4699999999999864 8999999999999999997553111 11 11222223778999999996554332
Q ss_pred ------eeEEEEeeEecc----cCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE
Q psy13207 92 ------ISIMYEAHSINA----EHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158 (197)
Q Consensus 92 ------~~~~~~~~~~~~----~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~ 158 (197)
.+++||..+++. ..+..|..-+++ ...-++++|.+|-.|++.|+.+ +.....+.+|.+.|.+
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S-----Gs~sH~LsGHr~~vla 193 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS-----GSFSHTLSGHRDGVLA 193 (397)
T ss_pred cccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC-----CcceeeeccccCceEE
Confidence 389999332221 134567777777 2222348888999999999977 7888899999999999
Q ss_pred EEEccCC-CEEEEEeCCCcEEEEEcCCC-cchhhhhhh
Q psy13207 159 VSWNITG-TIVASSGDDGCVRLWKLKKK-RKKKKEEEE 194 (197)
Q Consensus 159 ~~~~p~~-~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~ 194 (197)
+.|+|.. -.|++|+.||.|++||++.. +++..+..+
T Consensus 194 V~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~h 231 (397)
T KOG4283|consen 194 VEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQH 231 (397)
T ss_pred EEeccCceeEEEecCCCceEEEEEeecccceeEEeecc
Confidence 9999965 56789999999999999875 555555443
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-18 Score=125.99 Aligned_cols=170 Identities=13% Similarity=0.216 Sum_probs=136.9
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++...++|++|+++. .+++|.+.|+++.++-. ..+||+++..|-|.|..+.++....++.... ...+.-
T Consensus 96 sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~--DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s----gqsvRl 169 (673)
T KOG4378|consen 96 SGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNT--DEYIASVSDGGDIIIHGTKTKQKTTTFTIDS----GQSVRL 169 (673)
T ss_pred ccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCC--cceeEEeccCCcEEEEecccCccccceecCC----CCeEEE
Confidence 456778999999875 37899999999999987 8999999999999999998876544443221 456789
Q ss_pred EEEccCCCcccce------eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNSI------SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+.|+|..+++... +.+|| +......|..+...|+|+ .+..+|++.+.|+.|.+||.+. ....
T Consensus 170 l~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s-----~~s~ 244 (673)
T KOG4378|consen 170 LRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS-----QAST 244 (673)
T ss_pred eecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc-----cccc
Confidence 9999999987543 79999 333333899999999999 5666669999999999999975 2323
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+. ...+...++|+++|.+|+.|...|.|..||++..+
T Consensus 245 ~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 245 DRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK 283 (673)
T ss_pred ceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCC
Confidence 2222 35588999999999999999999999999998755
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-18 Score=118.65 Aligned_cols=120 Identities=23% Similarity=0.299 Sum_probs=103.4
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEe
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEA 98 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (197)
..+.+|.++|++++.+ +.++||||.|.+|+|||++....+.
T Consensus 37 F~~~aH~~sitavAVs----~~~~aSGssDetI~IYDm~k~~qlg----------------------------------- 77 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVS----GPYVASGSSDETIHIYDMRKRKQLG----------------------------------- 77 (362)
T ss_pred ccccccccceeEEEec----ceeEeccCCCCcEEEEeccchhhhc-----------------------------------
Confidence 4577899999999985 6699999999999999998764332
Q ss_pred eEecccCCCceeEEEEc-CC---CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 99 HSINAEHKDLIHDVAYD-YY---GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~-~~---~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
.+- .|...|+++.|. +. .+ ++|+.||.|.+|+... ..++..+++|...|+.++.+|.|++-++.+.|
T Consensus 78 -~ll-~HagsitaL~F~~~~S~shL--lS~sdDG~i~iw~~~~-----W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D 148 (362)
T KOG0294|consen 78 -ILL-SHAGSITALKFYPPLSKSHL--LSGSDDGHIIIWRVGS-----WELLKSLKAHKGQVTDLSIHPSGKLALSVGGD 148 (362)
T ss_pred -cee-ccccceEEEEecCCcchhhe--eeecCCCcEEEEEcCC-----eEEeeeecccccccceeEecCCCceEEEEcCC
Confidence 112 688889999998 22 45 9999999999999976 78999999999999999999999999999999
Q ss_pred CcEEEEEcCCCc
Q psy13207 175 GCVRLWKLKKKR 186 (197)
Q Consensus 175 g~i~iw~~~~~~ 186 (197)
+.+++||+-+++
T Consensus 149 ~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 149 QVLRTWNLVRGR 160 (362)
T ss_pred ceeeeehhhcCc
Confidence 999999997654
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=127.48 Aligned_cols=160 Identities=14% Similarity=0.221 Sum_probs=128.3
Q ss_pred Ccccccccceeeee---eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 5 PLQSEKCLNQWTRR---SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 5 ~~~~~~~~~~w~~~---~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
++.=|.++++|... ..+.+|+.+|+++.+-|+ + .++|||.|.+|++|.-.+ .++.+.- +...|+.++
T Consensus 117 SgSWD~TakvW~~~~l~~~l~gH~asVWAv~~l~e--~-~~vTgsaDKtIklWk~~~--~l~tf~g-----HtD~VRgL~ 186 (745)
T KOG0301|consen 117 SGSWDSTAKVWRIGELVYSLQGHTASVWAVASLPE--N-TYVTGSADKTIKLWKGGT--LLKTFSG-----HTDCVRGLA 186 (745)
T ss_pred ecccccceEEecchhhhcccCCcchheeeeeecCC--C-cEEeccCcceeeeccCCc--hhhhhcc-----chhheeeeE
Confidence 35567888999754 468999999999999997 6 789999999999999633 3333321 256789999
Q ss_pred EccCCCcccce----eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 82 WNHSFSRFNSI----SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 82 ~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
+-+++.++-++ |+.|+ +..+. +|...+.++... .+.+ +++++|+++++|+. .++...+.
T Consensus 187 vl~~~~flScsNDg~Ir~w~~~ge~l~~~~-ghtn~vYsis~~~~~~~I--vs~gEDrtlriW~~-------~e~~q~I~ 256 (745)
T KOG0301|consen 187 VLDDSHFLSCSNDGSIRLWDLDGEVLLEMH-GHTNFVYSISMALSDGLI--VSTGEDRTLRIWKK-------DECVQVIT 256 (745)
T ss_pred EecCCCeEeecCCceEEEEeccCceeeeee-ccceEEEEEEecCCCCeE--EEecCCceEEEeec-------CceEEEEe
Confidence 99998777544 89999 67777 999999999955 6666 99999999999998 45666665
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
-....|+++.+-++|. +++|+.||.|++|.....
T Consensus 257 lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 257 LPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred cCccceEEEEEeeCCC-EEEeccCceEEEEEeccc
Confidence 4455899999999998 678889999999988643
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.7e-18 Score=115.24 Aligned_cols=167 Identities=14% Similarity=0.171 Sum_probs=116.2
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc-ccce-----
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR-FNSI----- 92 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----- 92 (197)
..+.+|.+.|.+++|+.+ |..|++|+.|+++++|++...+....+. ...+...+..++|+|...- ++++
T Consensus 14 r~~~~~~~~v~Sv~wn~~--g~~lasgs~dktv~v~n~e~~r~~~~~~---~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCD--GTKLASGSFDKTVSVWNLERDRFRKELV---YRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEccc--CceeeecccCCceEEEEecchhhhhhhc---ccCCCcchhhheeCCCCCcceEEecCCce
Confidence 346789999999999999 9999999999999999998764432221 1112557888999886654 4433
Q ss_pred eEEEEe------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcc------------------------
Q psy13207 93 SIMYEA------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTR------------------------ 140 (197)
Q Consensus 93 ~~~~~~------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~------------------------ 140 (197)
+++||+ ..+. . ...=.-+.|+ +.++ +.++.|..|...|.++...
T Consensus 89 ir~wd~r~~k~~~~i~-~-~~eni~i~wsp~g~~~--~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Ffl 164 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIE-T-KGENINITWSPDGEYI--AVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFL 164 (313)
T ss_pred EEEEEeccCcEEEEee-c-cCcceEEEEcCCCCEE--EEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEE
Confidence 899992 2222 1 1222234455 3344 6666666666665542100
Q ss_pred ------------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 141 ------------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 141 ------------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
...+++..+++|.....|+.|+|+|++||+|+.|..+.+||+...-+.+.+.+.
T Consensus 165 t~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRl 230 (313)
T KOG1407|consen 165 TNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRL 230 (313)
T ss_pred ecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccc
Confidence 114556667799999999999999999999999999999999876666655543
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-18 Score=131.19 Aligned_cols=140 Identities=18% Similarity=0.301 Sum_probs=109.9
Q ss_pred Ccccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++..|++++.|+++. ++.+....|.+|.|+|.. +.+|+++...|.+.+||++.....
T Consensus 151 SGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~-~~~F~s~~dsG~lqlWDlRqp~r~----------------- 212 (839)
T KOG0269|consen 151 SGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGY-GNKFASIHDSGYLQLWDLRQPDRC----------------- 212 (839)
T ss_pred ecCCCceEEEEeeecccccccccccchhhhceeeccCC-CceEEEecCCceEEEeeccCchhH-----------------
Confidence 578999999999974 467788899999999953 889999999999999999976432
Q ss_pred EEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 80 LTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
...+. +|.+.|.|+.|+|+.-+||||++|++|+|||+.... ......+. -..+|.++
T Consensus 213 ------------------~~k~~-AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~---~~~~~tIn-Tiapv~rV 269 (839)
T KOG0269|consen 213 ------------------EKKLT-AHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR---AKPKHTIN-TIAPVGRV 269 (839)
T ss_pred ------------------HHHhh-cccCceEEEeecCCCceeeecCCCccEEEEeccCCC---ccceeEEe-ecceeeee
Confidence 11223 899999999999877777999999999999997532 22222222 14588999
Q ss_pred EEccCC-CEEEEEe--CCCcEEEEEcCCC
Q psy13207 160 SWNITG-TIVASSG--DDGCVRLWKLKKK 185 (197)
Q Consensus 160 ~~~p~~-~~l~~~~--~dg~i~iw~~~~~ 185 (197)
.|-|.. .+||+++ .|-.|++||++.+
T Consensus 270 kWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 270 KWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred eeccCccchhhhhhccccceEEEEeeccc
Confidence 999965 4566665 5889999999864
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-18 Score=118.85 Aligned_cols=155 Identities=13% Similarity=0.160 Sum_probs=128.7
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+|.+|.++|+....+.+ ....|+++.|-+-++||.-++..+..+. ++--|..++|+.+..+|.++ +
T Consensus 53 gtfeghkgavw~~~l~~n--a~~aasaaadftakvw~a~tgdelhsf~------hkhivk~~af~~ds~~lltgg~ekll 124 (334)
T KOG0278|consen 53 GTFEGHKGAVWSATLNKN--ATRAASAAADFTAKVWDAVTGDELHSFE------HKHIVKAVAFSQDSNYLLTGGQEKLL 124 (334)
T ss_pred EeeeccCcceeeeecCch--hhhhhhhcccchhhhhhhhhhhhhhhhh------hhheeeeEEecccchhhhccchHHHh
Confidence 579999999999999987 8889999999999999999987765544 35578999999999998887 6
Q ss_pred EEEE-------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 94 IMYE-------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 94 ~~~~-------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
++|+ ...+. +|...|+.+.|. .+.+ ++.+.|+.||+||.++ +..+..+.- +.+|.++.++++
T Consensus 125 rvfdln~p~App~E~~-ghtg~Ir~v~wc~eD~~i--LSSadd~tVRLWD~rT-----gt~v~sL~~-~s~VtSlEvs~d 195 (334)
T KOG0278|consen 125 RVFDLNRPKAPPKEIS-GHTGGIRTVLWCHEDKCI--LSSADDKTVRLWDHRT-----GTEVQSLEF-NSPVTSLEVSQD 195 (334)
T ss_pred hhhhccCCCCCchhhc-CCCCcceeEEEeccCceE--EeeccCCceEEEEecc-----CcEEEEEec-CCCCcceeeccC
Confidence 8888 44555 899999999998 6666 8889999999999998 566666543 568999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 165 GTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
|++|.+ ++.++|.+||.++.+.++.+
T Consensus 196 G~ilTi-a~gssV~Fwdaksf~~lKs~ 221 (334)
T KOG0278|consen 196 GRILTI-AYGSSVKFWDAKSFGLLKSY 221 (334)
T ss_pred CCEEEE-ecCceeEEeccccccceeec
Confidence 987654 57789999999987765543
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=114.38 Aligned_cols=178 Identities=11% Similarity=0.141 Sum_probs=128.6
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..|++++.+++.. .+..|..+|.|+.+++. ...+++||+|++|++||.+..... ..+.....|.++.
T Consensus 71 G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~--~~~vIsgsWD~~ik~wD~R~~~~~------~~~d~~kkVy~~~ 142 (323)
T KOG1036|consen 71 GGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYE--VGCVISGSWDKTIKFWDPRNKVVV------GTFDQGKKVYCMD 142 (323)
T ss_pred eccCceEEEEEecCCcceeeccCCCceEEEEeecc--CCeEEEcccCccEEEEeccccccc------cccccCceEEEEe
Confidence 56789999998864 46789999999999997 778999999999999999863221 2222244666666
Q ss_pred EccCCCcccce---eEEEEeeEec-------ccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 82 WNHSFSRFNSI---SIMYEAHSIN-------AEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 82 ~~~~~~~~~~~---~~~~~~~~~~-------~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
...+.-.+.+. +.+||++.+. ...+..++++++.| ..+ +.++-||.|.+=.++... .....-..|
T Consensus 143 v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy--~~sSieGRVavE~~d~s~-~~~skkyaF 219 (323)
T KOG1036|consen 143 VSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGY--VVSSIEGRVAVEYFDDSE-EAQSKKYAF 219 (323)
T ss_pred ccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCce--EEEeecceEEEEccCCch-HHhhhceeE
Confidence 54433222222 7899954433 13456789999885 667 999999999876554320 112233445
Q ss_pred cCce---------ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 150 EDHY---------CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 150 ~~h~---------~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
+.|. -+|++++|+|-...||||+.||.|.+||+.+.+.+..+..-
T Consensus 220 kCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~ 273 (323)
T KOG1036|consen 220 KCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY 273 (323)
T ss_pred EeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC
Confidence 5553 37899999999889999999999999999998877776543
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=122.03 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=125.7
Q ss_pred cccccccceeeee---------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 6 LQSEKCLNQWTRR---------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
+++.|+|-.|++. ..+..|..+|.++.|+|.+ ...+.+.|.||+|++-|++.......+... .....
T Consensus 206 GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n-~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~---~d~~~ 281 (498)
T KOG4328|consen 206 GDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPAN-TSQIYSSSYDGTIRLQDFEGNISEEVLSLD---TDNIW 281 (498)
T ss_pred ccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCC-hhheeeeccCceeeeeeecchhhHHHhhcC---cccee
Confidence 6788999999984 2367899999999999974 567889999999999999875422111111 01234
Q ss_pred eeeEEEccCCCcccce-----eEEEEee-------EecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCccc
Q psy13207 77 ASCLTWNHSFSRFNSI-----SIMYEAH-------SINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
+.++.|+.+...+..+ ..+||++ .+. .|...|..++++ +..+ +|++.|++.+|||++.-...
T Consensus 282 fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~-lh~kKI~sv~~NP~~p~~l--aT~s~D~T~kIWD~R~l~~K 358 (498)
T KOG4328|consen 282 FSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLR-LHKKKITSVALNPVCPWFL--ATASLDQTAKIWDLRQLRGK 358 (498)
T ss_pred eeeccccCCCccEEEeecccceEEEEeecCCccchhhh-hhhcccceeecCCCCchhe--eecccCcceeeeehhhhcCC
Confidence 5666676665544322 5778822 233 578899999999 6777 99999999999999873211
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..++.....|...|.+..|||.+-.|+|.+.|..|+|||..
T Consensus 359 -~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 359 -ASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred -CCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 11234455799999999999987669999999999999984
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-17 Score=117.39 Aligned_cols=161 Identities=19% Similarity=0.322 Sum_probs=115.8
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-cc---------cceeccceecc-CCCeeeEEEccCCCc
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-NL---------SQWCLQHEVAC-PTLASCLTWNHSFSR 88 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~ 88 (197)
..-.|.+.++-++-++.+...+.++-+..|.|.||++...- .+ .......++.+ +..-..++|+|-..-
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g 225 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG 225 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc
Confidence 34568888888888776224566777889999999986431 11 11122223332 455688999993222
Q ss_pred -ccc-----eeEEEE---------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 89 -FNS-----ISIMYE---------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 89 -~~~-----~~~~~~---------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
+++ .|++|. ...+. +|...|-.|+|+ ...+ ++|+.|+.|+|||+|++. .+.....+
T Consensus 226 ~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~-gH~~SVEDLqWSptE~~vf--aScS~DgsIrIWDiRs~~---~~~~~~~k 299 (440)
T KOG0302|consen 226 RLLSGDCVKGIHLWEPSTGSWKVDQRPFT-GHTKSVEDLQWSPTEDGVF--ASCSCDGSIRIWDIRSGP---KKAAVSTK 299 (440)
T ss_pred ccccCccccceEeeeeccCceeecCcccc-ccccchhhhccCCccCceE--EeeecCceEEEEEecCCC---ccceeEee
Confidence 332 277777 44455 799999999999 4445 999999999999999732 22223338
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+|...|+-++|+.+..+||+|+.||+++|||+++.+
T Consensus 300 Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~ 335 (440)
T KOG0302|consen 300 AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFK 335 (440)
T ss_pred ccCCceeeEEccCCcceeeecCCCceEEEEEhhhcc
Confidence 899999999999988899999999999999999754
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-17 Score=125.88 Aligned_cols=168 Identities=13% Similarity=0.127 Sum_probs=106.1
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce-----------------------------
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE----------------------------- 70 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~----------------------------- 70 (197)
++.+|+..|.+++++.+ ...++||+ .+.++||+..+.+.++++.....
T Consensus 368 ~~~GHR~dVRsl~vS~d--~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~ 444 (888)
T KOG0306|consen 368 EIGGHRSDVRSLCVSSD--SILLASGA-GESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASA 444 (888)
T ss_pred eeccchhheeEEEeecC--ceeeeecC-CCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehh
Confidence 36689999999999987 66666665 46999999988776554432100
Q ss_pred -----ec-cCCCeeeEEEccCCCcccce-----eEEEEeeEecc-----------------cCCCceeEEEEcCCCeEEE
Q psy13207 71 -----VA-CPTLASCLTWNHSFSRFNSI-----SIMYEAHSINA-----------------EHKDLIHDVAYDYYGLRMA 122 (197)
Q Consensus 71 -----~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-----------------~~~~~i~~~~~~~~~~~~~ 122 (197)
++ +...+.+++.+|++..++++ +++|+...... .....|.|+.++|+.-+|+
T Consensus 445 ~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~La 524 (888)
T KOG0306|consen 445 SLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLA 524 (888)
T ss_pred hhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEE
Confidence 00 13334444444444444333 45555110000 0123445555553333335
Q ss_pred EeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 123 s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
.+--|.++++|-+++ .+..-.+.||.-||.|+..+||+++++|||.|.+|++|-++-+.+.+.+-.|.
T Consensus 525 VsLLdnTVkVyflDt-----lKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHd 592 (888)
T KOG0306|consen 525 VSLLDNTVKVYFLDT-----LKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHD 592 (888)
T ss_pred EEeccCeEEEEEecc-----eeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhccc
Confidence 555555555555544 34445566999999999999999999999999999999999888877765554
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.8e-17 Score=126.93 Aligned_cols=161 Identities=14% Similarity=0.197 Sum_probs=130.0
Q ss_pred ccccccceeeeee-----ee---cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 7 QSEKCLNQWTRRS-----NL---VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~---~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
-+.|++-.++++. .+ ..|..+|.+++.... ++.+++++.+|.+++||.+....+..+.+ +..+.
T Consensus 467 ~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~--n~~~vsa~~~Gilkfw~f~~k~l~~~l~l------~~~~~ 538 (910)
T KOG1539|consen 467 YSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGT--NRLLVSAGADGILKFWDFKKKVLKKSLRL------GSSIT 538 (910)
T ss_pred ccCCeEEEEEcccCeeecccccCccccCceeEEEecCC--CceEEEccCcceEEEEecCCcceeeeecc------CCCcc
Confidence 4566777777653 34 479999999999887 89999999999999999988764444433 55778
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
++..+.....++.+ |.++| ++.+. +|...|++++|+++.-++++++.|++|++||+.+ +.++-
T Consensus 539 ~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~-gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt-----~~lID 612 (910)
T KOG1539|consen 539 GIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFW-GHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT-----GTLID 612 (910)
T ss_pred eeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhh-ccccceeeeEeCCCCcEEEEeecCCcEEEEeccC-----cceee
Confidence 88888888877654 78898 66777 9999999999997777779999999999999987 45554
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCC-CcEEEEEc
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDD-GCVRLWKL 182 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~d-g~i~iw~~ 182 (197)
.+. -..++.++.|+|+|.+||+...| .-|++|-=
T Consensus 613 ~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsN 647 (910)
T KOG1539|consen 613 GLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSN 647 (910)
T ss_pred eEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence 443 25678999999999999999988 66999953
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.7e-17 Score=115.07 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=126.4
Q ss_pred eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 17 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
+...|.+|.+.|.+..|-.. |+.+++++.|.+..+||+.+++.+..+.- ++...+.++-+|..+.++++
T Consensus 264 Pl~~ltgH~~vV~a~dWL~g--g~Q~vTaSWDRTAnlwDVEtge~v~~LtG-----Hd~ELtHcstHptQrLVvTsSrDt 336 (481)
T KOG0300|consen 264 PLMRLTGHRAVVSACDWLAG--GQQMVTASWDRTANLWDVETGEVVNILTG-----HDSELTHCSTHPTQRLVVTSSRDT 336 (481)
T ss_pred eeeeeeccccceEehhhhcC--cceeeeeeccccceeeeeccCceeccccC-----cchhccccccCCcceEEEEeccCc
Confidence 44568999999999999997 99999999999999999999876543321 14556677778887776544
Q ss_pred -eEEEE-------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 93 -SIMYE-------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 93 -~~~~~-------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
.++|| +..|+ +|...|+++.|+ ++.+ ++|+.|.+|++||+++. ..++..+.. ..+++.++.+.
T Consensus 337 TFRLWDFReaI~sV~VFQ-GHtdtVTS~vF~~dd~v--VSgSDDrTvKvWdLrNM----RsplATIRt-dS~~NRvavs~ 408 (481)
T KOG0300|consen 337 TFRLWDFREAIQSVAVFQ-GHTDTVTSVVFNTDDRV--VSGSDDRTVKVWDLRNM----RSPLATIRT-DSPANRVAVSK 408 (481)
T ss_pred eeEeccchhhcceeeeec-ccccceeEEEEecCCce--eecCCCceEEEeeeccc----cCcceeeec-CCccceeEeec
Confidence 79999 77888 999999999999 8889 99999999999999874 445555553 67889999998
Q ss_pred CCCEEEEEeCCCcEEEEEcCC
Q psy13207 164 TGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+.+++.--.+..|++||++-
T Consensus 409 g~~iIAiPhDNRqvRlfDlnG 429 (481)
T KOG0300|consen 409 GHPIIAIPHDNRQVRLFDLNG 429 (481)
T ss_pred CCceEEeccCCceEEEEecCC
Confidence 888888888889999999964
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-18 Score=135.77 Aligned_cols=179 Identities=18% Similarity=0.243 Sum_probs=133.6
Q ss_pred cccccccceeeeee-----------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccC
Q psy13207 6 LQSEKCLNQWTRRS-----------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 74 (197)
+-.||.+-+|+... ++..|.++|..++|++.+ ++.||+|+.||.|.|||++..+...... .....
T Consensus 86 G~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q-~nlLASGa~~geI~iWDlnn~~tP~~~~---~~~~~ 161 (1049)
T KOG0307|consen 86 GLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQ-GNLLASGADDGEILIWDLNKPETPFTPG---SQAPP 161 (1049)
T ss_pred cccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccC-CceeeccCCCCcEEEeccCCcCCCCCCC---CCCCc
Confidence 46788899998765 356799999999999984 6799999999999999998765432221 22236
Q ss_pred CCeeeEEEccCCCcccce------eEEEEeeE------ec-ccCCCceeEEEEcCCC-eEEEEeeCC---CeEEEEEccC
Q psy13207 75 TLASCLTWNHSFSRFNSI------SIMYEAHS------IN-AEHKDLIHDVAYDYYG-LRMATCSSD---QNIKVTRDVM 137 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~------~~~~~~~~------~~-~~~~~~i~~~~~~~~~-~~~~s~~~d---~~i~~~d~~~ 137 (197)
..|.+++|+..-..+.++ ..+||++. +. ......+..++|+|+. -++++++.| -.|.+||+|.
T Consensus 162 ~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ 241 (1049)
T KOG0307|consen 162 SEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRF 241 (1049)
T ss_pred ccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccc
Confidence 789999999887765333 68999222 22 0122457899999322 222566554 4689999985
Q ss_pred CcccceeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 138 GTRFDIETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 138 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
. ...++.+.+|...|.++.|++.+ ++|++++.|+.|.+|+.++++.+.++.
T Consensus 242 a----ssP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p 293 (1049)
T KOG0307|consen 242 A----SSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELP 293 (1049)
T ss_pred c----CCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecC
Confidence 3 56778889999999999999955 899999999999999999977655544
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-17 Score=119.47 Aligned_cols=150 Identities=17% Similarity=0.194 Sum_probs=121.2
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
+|.+.+.+++.+++ |.+|++|+.|..|.||+.++.+.+..+.- +...|.+++|......+.++ +++|+
T Consensus 200 ~h~keil~~avS~D--gkylatgg~d~~v~Iw~~~t~ehv~~~~g-----hr~~V~~L~fr~gt~~lys~s~Drsvkvw~ 272 (479)
T KOG0299|consen 200 GHVKEILTLAVSSD--GKYLATGGRDRHVQIWDCDTLEHVKVFKG-----HRGAVSSLAFRKGTSELYSASADRSVKVWS 272 (479)
T ss_pred cccceeEEEEEcCC--CcEEEecCCCceEEEecCcccchhhcccc-----cccceeeeeeecCccceeeeecCCceEEEe
Confidence 78899999999999 99999999999999999998865544321 25789999998776665443 89999
Q ss_pred ------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE
Q psy13207 98 ------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 98 ------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 169 (197)
+.++- +|...|.+|.-. ...+ -.|+.|.++++|++.. +....+.+|.+.+-|++|-. ...++
T Consensus 273 ~~~~s~vetly-GHqd~v~~IdaL~reR~v--tVGgrDrT~rlwKi~e------esqlifrg~~~sidcv~~In-~~Hfv 342 (479)
T KOG0299|consen 273 IDQLSYVETLY-GHQDGVLGIDALSRERCV--TVGGRDRTVRLWKIPE------ESQLIFRGGEGSIDCVAFIN-DEHFV 342 (479)
T ss_pred hhHhHHHHHHh-CCccceeeechhcccceE--EeccccceeEEEeccc------cceeeeeCCCCCeeeEEEec-cccee
Confidence 66667 899999999887 4444 5566999999999953 34445778888999999984 56799
Q ss_pred EEeCCCcEEEEEcCCCcchh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~ 189 (197)
+||.||.|.+|++.+.+.+.
T Consensus 343 sGSdnG~IaLWs~~KKkplf 362 (479)
T KOG0299|consen 343 SGSDNGSIALWSLLKKKPLF 362 (479)
T ss_pred eccCCceEEEeeecccCcee
Confidence 99999999999998876543
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-18 Score=131.05 Aligned_cols=169 Identities=20% Similarity=0.274 Sum_probs=140.2
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
+.|+.+ .+.+|...|.++..-.. ++.+++|+.|..+-+|.+.....+..+. -+..+|.++.|+++...++++
T Consensus 17 r~~~~~-~~~~hsaav~~lk~~~s--~r~~~~Gg~~~k~~L~~i~kp~~i~S~~-----~hespIeSl~f~~~E~Llaag 88 (825)
T KOG0267|consen 17 RVWDTR-EFVAHSAAVGCLKIRKS--SRSLVTGGEDEKVNLWAIGKPNAITSLT-----GHESPIESLTFDTSERLLAAG 88 (825)
T ss_pred ccccch-hhhhhhhhhceeeeecc--ceeeccCCCceeeccccccCCchhheee-----ccCCcceeeecCcchhhhccc
Confidence 344433 46679999999998655 8899999999999999988765443211 126799999999999998765
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|| ++++. +|...+..+.|+|..-++++|+.|+.+++||.+. ..+...+.+|...|..+.|
T Consensus 89 sasgtiK~wDleeAk~vrtLt-gh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk-----~Gc~~~~~s~~~vv~~l~l 162 (825)
T KOG0267|consen 89 SASGTIKVWDLEEAKIVRTLT-GHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRK-----KGCSHTYKSHTRVVDVLRL 162 (825)
T ss_pred ccCCceeeeehhhhhhhhhhh-ccccCcceeeeccceEEeccccccccceehhhhc-----cCceeeecCCcceeEEEee
Confidence 89999 66777 9999999999996555559999999999999975 6788889999999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
+|+|++++.++.|.+++|||...++...+++.++
T Consensus 163 sP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e 196 (825)
T KOG0267|consen 163 SPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHE 196 (825)
T ss_pred cCCCceeeccCCcceeeeeccccccccccccccc
Confidence 9999999999999999999998887776666443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-16 Score=111.79 Aligned_cols=172 Identities=19% Similarity=0.240 Sum_probs=126.1
Q ss_pred cceeeeeeee-cCCCcceeEEEECCCC---CCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCC
Q psy13207 12 LNQWTRRSNL-VDSRTSVTDVKFGPKQ---LGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFS 87 (197)
Q Consensus 12 ~~~w~~~~~~-~~h~~~v~~~~~~~~~---~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (197)
-+.|+....+ ..|..+|.+++|++.. ..+.++|++. +++.||.......++.++.......++....++|+-+..
T Consensus 24 k~~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~ 102 (385)
T KOG1034|consen 24 KRSYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSN 102 (385)
T ss_pred ccceEeeeehhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCC
Confidence 4556665554 5788999999998531 1355676664 588899876544333222222223466778888876544
Q ss_pred ----cccce-----eEEEE------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeee-
Q psy13207 88 ----RFNSI-----SIMYE------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN- 148 (197)
Q Consensus 88 ----~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~- 148 (197)
+++.+ |++.| ...+. +|...|+.|.++ |+++ ++++.|..||+|++++ ..++..
T Consensus 103 ~~~p~la~~G~~GvIrVid~~~~~~~~~~~-ghG~sINeik~~p~~~qlv--ls~SkD~svRlwnI~~-----~~Cv~Vf 174 (385)
T KOG1034|consen 103 TGNPFLAAGGYLGVIRVIDVVSGQCSKNYR-GHGGSINEIKFHPDRPQLV--LSASKDHSVRLWNIQT-----DVCVAVF 174 (385)
T ss_pred CCCeeEEeecceeEEEEEecchhhhcccee-ccCccchhhhcCCCCCcEE--EEecCCceEEEEeccC-----CeEEEEe
Confidence 34433 68888 45566 899999999999 6677 9999999999999987 455544
Q ss_pred --ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 149 --FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 149 --~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+.+|...|.++.|+++|.++++++.|.++++|+++.++-+..++
T Consensus 175 GG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE 220 (385)
T KOG1034|consen 175 GGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLE 220 (385)
T ss_pred cccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhh
Confidence 56799999999999999999999999999999999765555444
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4e-17 Score=123.49 Aligned_cols=77 Identities=23% Similarity=0.291 Sum_probs=61.5
Q ss_pred cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC----CcccceeeeeeecCceec----EEEEEEccCCCEEEEEeCCC
Q psy13207 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM----GTRFDIETIGNFEDHYCT----VWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~----~~~~~~~~~~~~~~h~~~----v~~~~~~p~~~~l~~~~~dg 175 (197)
-|...++.++|++.+-+|++|+.||.+.||--.- .++....++..+.+|... |..+.|+|...+|++++.||
T Consensus 648 ~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~ 727 (733)
T KOG0650|consen 648 LHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADG 727 (733)
T ss_pred hhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCc
Confidence 4777889999997777779999999999884321 011124567788899765 89999999999999999999
Q ss_pred cEEEE
Q psy13207 176 CVRLW 180 (197)
Q Consensus 176 ~i~iw 180 (197)
+|++|
T Consensus 728 tirlf 732 (733)
T KOG0650|consen 728 TIRLF 732 (733)
T ss_pred eEEee
Confidence 99998
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=124.26 Aligned_cols=158 Identities=11% Similarity=0.119 Sum_probs=131.1
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
.|+.+++|++.. .|++|++.+.|+..+++ |..|-||+-|++|+.||+++++.+.+... ...|.++..
T Consensus 529 sdGnI~vwDLhnq~~VrqfqGhtDGascIdis~d--GtklWTGGlDntvRcWDlregrqlqqhdF------~SQIfSLg~ 600 (705)
T KOG0639|consen 529 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKD--GTKLWTGGLDNTVRCWDLREGRQLQQHDF------SSQIFSLGY 600 (705)
T ss_pred cCCcEEEEEcccceeeecccCCCCCceeEEecCC--CceeecCCCccceeehhhhhhhhhhhhhh------hhhheeccc
Confidence 578999999864 58999999999999999 99999999999999999999877654332 457899999
Q ss_pred ccCCCccccee---EEEE-------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 83 NHSFSRFNSIS---IMYE-------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 83 ~~~~~~~~~~~---~~~~-------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
+|++.+++.++ .+|- ...+. -|.+-|.++.|+ +..+ ++.+.|+.+..|...- +..+++.+
T Consensus 601 cP~~dWlavGMens~vevlh~skp~kyqlh-lheScVLSlKFa~cGkwf--vStGkDnlLnawrtPy-----GasiFqsk 672 (705)
T KOG0639|consen 601 CPTGDWLAVGMENSNVEVLHTSKPEKYQLH-LHESCVLSLKFAYCGKWF--VSTGKDNLLNAWRTPY-----GASIFQSK 672 (705)
T ss_pred CCCccceeeecccCcEEEEecCCccceeec-ccccEEEEEEecccCcee--eecCchhhhhhccCcc-----ccceeecc
Confidence 99999998873 4444 33344 578889999999 6666 9999999999999864 44555544
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
. ...|.++..+.|.+|+++||.|....+|.+
T Consensus 673 E-~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 673 E-SSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred c-cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 3 578999999999999999999999998865
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-17 Score=119.24 Aligned_cols=151 Identities=16% Similarity=0.191 Sum_probs=120.6
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc-ccce-----eEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR-FNSI-----SIMY 96 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~ 96 (197)
+|+++|.++.|+.. ..+.|||||.|.+|++||+.+++....+. .+...|.++.|+|.... +.++ +.+.
T Consensus 241 gHTdavl~Ls~n~~-~~nVLaSgsaD~TV~lWD~~~g~p~~s~~-----~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~ 314 (463)
T KOG0270|consen 241 GHTDAVLALSWNRN-FRNVLASGSADKTVKLWDVDTGKPKSSIT-----HHGKKVQTLEWHPYEPSVLLSGSYDGTVALK 314 (463)
T ss_pred cchHHHHHHHhccc-cceeEEecCCCceEEEEEcCCCCcceehh-----hcCCceeEEEecCCCceEEEeccccceEEee
Confidence 69999999999985 36889999999999999999987543332 13778999999997655 3333 6777
Q ss_pred EeeEeccc-----CCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC-CCE
Q psy13207 97 EAHSINAE-----HKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT-GTI 167 (197)
Q Consensus 97 ~~~~~~~~-----~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~ 167 (197)
|.+..... -.+.|-.++|+ ++.+ +++..||+|+-+|+|+. ++++.++++|.+.|.++++++. ..+
T Consensus 315 D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f--~~~tddG~v~~~D~R~~----~~~vwt~~AHd~~ISgl~~n~~~p~~ 388 (463)
T KOG0270|consen 315 DCRDPSNSGKEWKFDGEVEKVAWDPHSENSF--FVSTDDGTVYYFDIRNP----GKPVWTLKAHDDEISGLSVNIQTPGL 388 (463)
T ss_pred eccCccccCceEEeccceEEEEecCCCceeE--EEecCCceEEeeecCCC----CCceeEEEeccCCcceEEecCCCCcc
Confidence 75532211 23568889998 4555 89999999999999974 5889999999999999999984 568
Q ss_pred EEEEeCCCcEEEEEcCCC
Q psy13207 168 VASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~ 185 (197)
+++++.|+.|++|++...
T Consensus 389 l~t~s~d~~Vklw~~~~~ 406 (463)
T KOG0270|consen 389 LSTASTDKVVKLWKFDVD 406 (463)
T ss_pred eeeccccceEEEEeecCC
Confidence 999999999999998653
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-16 Score=104.55 Aligned_cols=157 Identities=17% Similarity=0.198 Sum_probs=121.3
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc----CCCeeeEEEccCCCcccce---
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC----PTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--- 92 (197)
.+.+|++-|.++- +=+ +-.+++|++|.+|++||++-...+..+ ...+.. ...+..++..|.|+.++++
T Consensus 178 a~sghtghilaly-swn--~~m~~sgsqdktirfwdlrv~~~v~~l--~~~~~~~glessavaav~vdpsgrll~sg~~d 252 (350)
T KOG0641|consen 178 ALSGHTGHILALY-SWN--GAMFASGSQDKTIRFWDLRVNSCVNTL--DNDFHDGGLESSAVAAVAVDPSGRLLASGHAD 252 (350)
T ss_pred eecCCcccEEEEE-Eec--CcEEEccCCCceEEEEeeeccceeeec--cCcccCCCcccceeEEEEECCCcceeeeccCC
Confidence 4778999888864 223 668999999999999999865443322 122221 4678999999999999876
Q ss_pred --eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
..+|| +..+. .|...|+++.|+|...++++|+.|..|++-|+...-.. .-++.....|+..+..+.|+|+
T Consensus 253 ssc~lydirg~r~iq~f~-phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~-el~~~vv~ehkdk~i~~rwh~~ 330 (350)
T KOG0641|consen 253 SSCMLYDIRGGRMIQRFH-PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH-ELPIMVVAEHKDKAIQCRWHPQ 330 (350)
T ss_pred CceEEEEeeCCceeeeeC-CCccceeEEEeCCCceEEEEecccceEEEeecccchhh-cCceEEEEeccCceEEEEecCc
Confidence 68888 77788 89999999999966666699999999999998632111 1123344568889999999999
Q ss_pred CCEEEEEeCCCcEEEEEcC
Q psy13207 165 GTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~ 183 (197)
.--+++.+.|.++.+|-++
T Consensus 331 d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 331 DFSFISSSADKTATLWALN 349 (350)
T ss_pred cceeeeccCcceEEEeccC
Confidence 8889999999999999764
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.5e-17 Score=112.41 Aligned_cols=151 Identities=14% Similarity=0.168 Sum_probs=112.0
Q ss_pred ccccccceeeeeee-------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 7 QSEKCLNQWTRRSN-------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 7 ~~~~~~~~w~~~~~-------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
.=|++||.|+++.. ...|.++|.+++|+.+ |..+++|+.|+.+++||+.++... ++ -.+..++.+
T Consensus 47 SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsdd--gskVf~g~~Dk~~k~wDL~S~Q~~-~v-----~~Hd~pvkt 118 (347)
T KOG0647|consen 47 SWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDD--GSKVFSGGCDKQAKLWDLASGQVS-QV-----AAHDAPVKT 118 (347)
T ss_pred ccCCceEEEEEecCCcccchhhhccCCCeEEEEEccC--CceEEeeccCCceEEEEccCCCee-ee-----eecccceeE
Confidence 44789999999873 4569999999999998 999999999999999999987422 11 122566777
Q ss_pred EEEccCCC--cccce-----eEEEE-------------------------------------------------------
Q psy13207 80 LTWNHSFS--RFNSI-----SIMYE------------------------------------------------------- 97 (197)
Q Consensus 80 ~~~~~~~~--~~~~~-----~~~~~------------------------------------------------------- 97 (197)
+.|-+-.. .|+++ ++.||
T Consensus 119 ~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk 198 (347)
T KOG0647|consen 119 CHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLK 198 (347)
T ss_pred EEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCccc
Confidence 77765544 33333 34444
Q ss_pred -------------------------e-----------eEecccCC---------CceeEEEEcCCCeEEEEeeCCCeEEE
Q psy13207 98 -------------------------A-----------HSINAEHK---------DLIHDVAYDYYGLRMATCSSDQNIKV 132 (197)
Q Consensus 98 -------------------------~-----------~~~~~~~~---------~~i~~~~~~~~~~~~~s~~~d~~i~~ 132 (197)
+ ..+. .|+ ..|++|+|+|..=.|+|.+.||++..
T Consensus 199 ~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFk-CHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~F 277 (347)
T KOG0647|consen 199 WQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFK-CHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSF 277 (347)
T ss_pred ceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEE-EeccCCCCCCceEEecceEeecccceEEEecCCceEEE
Confidence 1 1122 343 35788999955444499999999999
Q ss_pred EEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
||-.. ...+.....|..+|.+++|+.+|.++|-+
T Consensus 278 WDkda-----r~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 278 WDKDA-----RTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ecchh-----hhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 99865 56777888899999999999999988754
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.3e-16 Score=107.79 Aligned_cols=175 Identities=19% Similarity=0.295 Sum_probs=128.2
Q ss_pred cccccccceeeee---------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc--c-cccceeccceecc
Q psy13207 6 LQSEKCLNQWTRR---------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV--M-NLSQWCLQHEVAC 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~--~-~~~~~~~~~~~~~ 73 (197)
..+|+++++|+.. ..-+.|.+.|..+.|.+-..|+.+|+||.|+++.||.-... + ...+|....++..
T Consensus 31 CSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~D 110 (361)
T KOG2445|consen 31 CSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVD 110 (361)
T ss_pred ccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeec
Confidence 4577888888743 34678999999999976557999999999999999986322 1 1235655555554
Q ss_pred -CCCeeeEEEccCCCc--ccce-----eEEEE---------------eeE---ecccCCCceeEEEEc-----CCCeEEE
Q psy13207 74 -PTLASCLTWNHSFSR--FNSI-----SIMYE---------------AHS---INAEHKDLIHDVAYD-----YYGLRMA 122 (197)
Q Consensus 74 -~~~~~~~~~~~~~~~--~~~~-----~~~~~---------------~~~---~~~~~~~~i~~~~~~-----~~~~~~~ 122 (197)
...++.+.|.|...- ++++ ++||+ +.. ....+.....|+.|+ ...+ +
T Consensus 111 srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~i--A 188 (361)
T KOG2445|consen 111 SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLI--A 188 (361)
T ss_pred CCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceE--E
Confidence 678999999997654 3333 78888 111 111466778899998 3444 7
Q ss_pred EeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccC----CCEEEEEeCCCcEEEEEcCC
Q psy13207 123 TCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT----GTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 123 s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~----~~~l~~~~~dg~i~iw~~~~ 184 (197)
.|+.+ +.+.||....+. .+...+.++.+|+.+|++++|.|+ ..+||+++.|| |+||++..
T Consensus 189 vgs~e~a~~~~~~~Iye~~e~~-rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 189 VGSDEDAPHLNKVKIYEYNENG-RKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKV 257 (361)
T ss_pred EEcccCCccccceEEEEecCCc-ceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEee
Confidence 77665 578888775432 124566778899999999999996 35899999999 99999975
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-16 Score=114.63 Aligned_cols=172 Identities=15% Similarity=0.246 Sum_probs=127.6
Q ss_pred CCcccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-ccceeccceeccCCCe
Q psy13207 4 SPLQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-LSQWCLQHEVACPTLA 77 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-~~~~~~~~~~~~~~~~ 77 (197)
.++..|.+|++|++.. ++..|.+.|.+++|+|.. ...|++|+.|++|.+.|.+.... -..|+. ...|
T Consensus 260 aSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~-p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~------~g~V 332 (463)
T KOG0270|consen 260 ASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYE-PSVLLSGSYDGTVALKDCRDPSNSGKEWKF------DGEV 332 (463)
T ss_pred EecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCC-ceEEEeccccceEEeeeccCccccCceEEe------ccce
Confidence 3678899999999863 577899999999999964 78999999999999999985432 223333 5678
Q ss_pred eeEEEccCCCcc-cce-----eEEEE-------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCccc
Q psy13207 78 SCLTWNHSFSRF-NSI-----SIMYE-------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 78 ~~~~~~~~~~~~-~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
..++|.|..... +++ ++-+| +-.++ .|...|.+|+++ |..+ +|++.|+.|++|++....
T Consensus 333 Ekv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~-AHd~~ISgl~~n~~~p~~l--~t~s~d~~Vklw~~~~~~-- 407 (463)
T KOG0270|consen 333 EKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK-AHDDEISGLSVNIQTPGLL--STASTDKVVKLWKFDVDS-- 407 (463)
T ss_pred EEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEE-eccCCcceEEecCCCCcce--eeccccceEEEEeecCCC--
Confidence 899999877653 222 56666 55667 899999999999 8888 999999999999986421
Q ss_pred ceeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcch
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
...+..-.-.-+...|.++.|+- -.++.|+..+.+++||+.+...+
T Consensus 408 -~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 408 -PKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred -CcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 11121111112346777888864 46677888888999999876544
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=122.49 Aligned_cols=178 Identities=18% Similarity=0.250 Sum_probs=125.7
Q ss_pred ccccceeeeee--------eecCCCcceeEEEECCCC---------CCcEEEEEeCCCcEEEEEcCCccccccee-----
Q psy13207 9 EKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQ---------LGLVLATCAADGLVRIYEAPDVMNLSQWC----- 66 (197)
Q Consensus 9 ~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~---------~~~~l~s~~~dg~v~iw~~~~~~~~~~~~----- 66 (197)
|..+.+|+++. .+--|...|+.+.--|.+ -..-|+||+.|++|++|++.....-..+.
T Consensus 345 dhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils 424 (1080)
T KOG1408|consen 345 DHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILS 424 (1080)
T ss_pred CceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccch
Confidence 56678888763 244588888888876621 01248999999999999997632111000
Q ss_pred --c-------------------------cceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCc
Q psy13207 67 --L-------------------------QHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDL 108 (197)
Q Consensus 67 --~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~ 108 (197)
+ .........+.+++.+|++++|+++ +++|+ +..+. .|..+
T Consensus 425 ~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~e-AHesE 503 (1080)
T KOG1408|consen 425 ANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFME-AHESE 503 (1080)
T ss_pred hhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhhee-cccce
Confidence 0 0011125578999999999999987 89999 33445 89999
Q ss_pred eeEEEEc-----CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------------------------------
Q psy13207 109 IHDVAYD-----YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH------------------------------- 152 (197)
Q Consensus 109 i~~~~~~-----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h------------------------------- 152 (197)
|.|+.|+ ..++ ++++.|..|.+||...+ ..++..+.+|
T Consensus 504 ilcLeyS~p~~~~kLL--ASasrdRlIHV~Dv~rn----y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~ 577 (1080)
T KOG1408|consen 504 ILCLEYSFPVLTNKLL--ASASRDRLIHVYDVKRN----YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRV 577 (1080)
T ss_pred eEEEeecCchhhhHhh--hhccCCceEEEEecccc----cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheeh
Confidence 9999999 2345 99999999999998621 1222222222
Q ss_pred ------------------eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 153 ------------------YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 153 ------------------~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
...++.++..|+-+++++++.|..|+|||+.++++.+.++.
T Consensus 578 ~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKg 636 (1080)
T KOG1408|consen 578 NQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKG 636 (1080)
T ss_pred hccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecc
Confidence 23466777778878999999999999999999988777653
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=6e-17 Score=121.50 Aligned_cols=177 Identities=18% Similarity=0.239 Sum_probs=135.4
Q ss_pred ccccceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc--ccceeccceecc-CCCeeeEEEccC
Q psy13207 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN--LSQWCLQHEVAC-PTLASCLTWNHS 85 (197)
Q Consensus 9 ~~~~~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~ 85 (197)
+...+.|.+..++..|.+.|.++.|.|. .-.|++|+.||++++|+++.... ...+....++.+ ..+|.|++..+.
T Consensus 278 ~a~~k~w~ik~tl~s~~d~ir~l~~~~s--ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n 355 (577)
T KOG0642|consen 278 KAFTKKWNIKFTLRSHDDCIRALAFHPS--EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSN 355 (577)
T ss_pred hhhheecceeeeeecchhhhhhhhcCCC--CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCC
Confidence 4456779998899999999999999998 77899999999999999943221 112333445554 889999999999
Q ss_pred CCcccce-----eEEEE----------------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcc--
Q psy13207 86 FSRFNSI-----SIMYE----------------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTR-- 140 (197)
Q Consensus 86 ~~~~~~~-----~~~~~----------------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~-- 140 (197)
+....++ |+.|+ ...+. +|...++.++++ ++.+ ++|+.||++++|+......
T Consensus 356 ~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~-Ghtdavw~l~~s~~~~~L--lscs~DgTvr~w~~~~~~~~~ 432 (577)
T KOG0642|consen 356 GEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLL-GHTDAVWLLALSSTKDRL--LSCSSDGTVRLWEPTEESPCT 432 (577)
T ss_pred ceEEEeeccCceeeeeccCCCCCcccccCcchhcccee-ccccceeeeeecccccce--eeecCCceEEeeccCCcCccc
Confidence 9886554 89994 44556 899999999999 6666 9999999999994321000
Q ss_pred --------------------------------------------------------------------------------
Q psy13207 141 -------------------------------------------------------------------------------- 140 (197)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (197)
T Consensus 433 f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~ 512 (577)
T KOG0642|consen 433 FGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRS 512 (577)
T ss_pred cCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCc
Confidence
Q ss_pred ------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 141 ------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 141 ------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.....+.....|...++++++.|+|-+|++++.|+++++|.+....+...
T Consensus 513 Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~e 568 (577)
T KOG0642|consen 513 IRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLE 568 (577)
T ss_pred eecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeec
Confidence 11222233336778899999999999999999999999999877655443
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-17 Score=124.46 Aligned_cols=124 Identities=19% Similarity=0.274 Sum_probs=102.6
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEeccc
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAE 104 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (197)
...|+++.|.|-. .+.||.++.||.|+||.+..+.......- | ...+. .
T Consensus 627 gt~vtDl~WdPFD-~~rLAVa~ddg~i~lWr~~a~gl~e~~~t----------------P-------------e~~lt-~ 675 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFD-DERLAVATDDGQINLWRLTANGLPENEMT----------------P-------------EKILT-I 675 (1012)
T ss_pred CceeeecccCCCC-hHHeeecccCceEEEEEeccCCCCcccCC----------------c-------------ceeee-c
Confidence 4579999999953 78899999999999999976532211100 0 11233 8
Q ss_pred CCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 105 HKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 105 ~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
|...|.++.|+ .+.+ ++++.|-+|++||+.+ ......+.+|.+.|..++|||+|+.+|+.+.||+|++|+
T Consensus 676 h~eKI~slRfHPLAadvL--a~asyd~Ti~lWDl~~-----~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 676 HGEKITSLRFHPLAADVL--AVASYDSTIELWDLAN-----AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred ccceEEEEEecchhhhHh--hhhhccceeeeeehhh-----hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeC
Confidence 99999999999 7888 9999999999999987 566678899999999999999999999999999999999
Q ss_pred cCCCc
Q psy13207 182 LKKKR 186 (197)
Q Consensus 182 ~~~~~ 186 (197)
.++..
T Consensus 749 Prs~e 753 (1012)
T KOG1445|consen 749 PRSRE 753 (1012)
T ss_pred CCCCC
Confidence 98764
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=106.70 Aligned_cols=146 Identities=18% Similarity=0.215 Sum_probs=113.4
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEEE---
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE--- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--- 97 (197)
...|..+.|+|. +..|+.+++||++++|++...... ..+....++.+++|.++...+..+ ++.+|
T Consensus 13 ~d~IS~v~f~~~--~~~LLvssWDgslrlYdv~~~~l~------~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPS--SSDLLVSSWDGSLRLYDVPANSLK------LKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCc--CCcEEEEeccCcEEEEeccchhhh------hheecCCceeeeeccCCceEEEeccCceEEEEEecC
Confidence 467999999987 778888889999999999876433 333446789999999976655443 79999
Q ss_pred --eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 --AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
...+. .|...+++|.++ .+.+ ++|+.|++|++||.++ ......+.. ...|.++... |+.|+.|+.
T Consensus 85 ~~~~~ig-th~~~i~ci~~~~~~~~v--IsgsWD~~ik~wD~R~-----~~~~~~~d~-~kkVy~~~v~--g~~LvVg~~ 153 (323)
T KOG1036|consen 85 GNEDQIG-THDEGIRCIEYSYEVGCV--ISGSWDKTIKFWDPRN-----KVVVGTFDQ-GKKVYCMDVS--GNRLVVGTS 153 (323)
T ss_pred Ccceeec-cCCCceEEEEeeccCCeE--EEcccCccEEEEeccc-----ccccccccc-CceEEEEecc--CCEEEEeec
Confidence 23344 799999999999 6777 9999999999999985 233333332 3478888775 788999999
Q ss_pred CCcEEEEEcCCCcchh
Q psy13207 174 DGCVRLWKLKKKRKKK 189 (197)
Q Consensus 174 dg~i~iw~~~~~~~~~ 189 (197)
|..+.+||+++.....
T Consensus 154 ~r~v~iyDLRn~~~~~ 169 (323)
T KOG1036|consen 154 DRKVLIYDLRNLDEPF 169 (323)
T ss_pred CceEEEEEcccccchh
Confidence 9999999999876543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=115.71 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=128.7
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccce-ec----------ccee--ccCCCeeeEEEccCC
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQW-CL----------QHEV--ACPTLASCLTWNHSF 86 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~-~~----------~~~~--~~~~~~~~~~~~~~~ 86 (197)
.+..|.-+|.++.++|+ +.+.++++.|++|.-|++.+++....+ .. .... .+...+.+++.++++
T Consensus 137 ~~~~H~~s~~~vals~d--~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 137 VIGKHQLSVTSVALSPD--DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred eeccccCcceEEEeecc--ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 35679999999999999 999999999999999999887644211 11 0011 124568899999999
Q ss_pred Ccccce-----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce
Q psy13207 87 SRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY 153 (197)
Q Consensus 87 ~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~ 153 (197)
++++++ +.||+ ++.+. +|...|.+++|- ++.+ .+++.|+.|++|++.. ...+.++.+|.
T Consensus 215 kylatgg~d~~v~Iw~~~t~ehv~~~~-ghr~~V~~L~fr~gt~~l--ys~s~Drsvkvw~~~~-----~s~vetlyGHq 286 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLEHVKVFK-GHRGAVSSLAFRKGTSEL--YSASADRSVKVWSIDQ-----LSYVETLYGHQ 286 (479)
T ss_pred cEEEecCCCceEEEecCcccchhhccc-ccccceeeeeeecCccce--eeeecCCceEEEehhH-----hHHHHHHhCCc
Confidence 999987 78999 66677 999999999998 7777 9999999999999965 66778889999
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
+.|.++.-..-++.+-.|+.|+++++|++..
T Consensus 287 d~v~~IdaL~reR~vtVGgrDrT~rlwKi~e 317 (479)
T KOG0299|consen 287 DGVLGIDALSRERCVTVGGRDRTVRLWKIPE 317 (479)
T ss_pred cceeeechhcccceEEeccccceeEEEeccc
Confidence 9999998887788777788999999999954
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.2e-16 Score=108.29 Aligned_cols=163 Identities=12% Similarity=0.140 Sum_probs=123.1
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+=.+|.+-+|++.+ .|.+|..+|.+++|+++ |++|+|+|.|..+++||+..+..++++.. ..+|..+
T Consensus 41 Gc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~d--gr~LltsS~D~si~lwDl~~gs~l~rirf------~spv~~~ 112 (405)
T KOG1273|consen 41 GCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRD--GRKLLTSSRDWSIKLWDLLKGSPLKRIRF------DSPVWGA 112 (405)
T ss_pred eccCCcEEEEEccccchhhhhhccccceeEEEecCC--CCEeeeecCCceeEEEeccCCCceeEEEc------cCcccee
Confidence 34578888999875 48899999999999999 99999999999999999999876554443 6688999
Q ss_pred EEccCCCccccee--------EEEE--eeEe-cccC----CCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 81 TWNHSFSRFNSIS--------IMYE--AHSI-NAEH----KDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 81 ~~~~~~~~~~~~~--------~~~~--~~~~-~~~~----~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.|+|-.+..+.+. ..++ .+.+ +... +....+..|. |.++ ++|...|.+.++|..+ .
T Consensus 113 q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yI--itGtsKGkllv~~a~t-----~ 185 (405)
T KOG1273|consen 113 QWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYI--ITGTSKGKLLVYDAET-----L 185 (405)
T ss_pred eeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEE--EEecCcceEEEEecch-----h
Confidence 9999776543321 1111 1111 1000 1112223455 7777 9999999999999987 5
Q ss_pred eeeeeecCce-ecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 144 ETIGNFEDHY-CTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 144 ~~~~~~~~h~-~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+++..++--. ..|..+.++..|+.|+..+.|..|+.|+.+
T Consensus 186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 6776665544 788999999999999999999999999886
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-16 Score=110.23 Aligned_cols=168 Identities=17% Similarity=0.250 Sum_probs=128.2
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCeeeEEEccCCCcccce
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 92 (197)
.|...+++..|...|++++|+|. .+.|++|+.|..-++|....+. .|...-.+ +.....+++.|+|..+.|+.+
T Consensus 44 ~w~~~htls~Hd~~vtgvdWap~--snrIvtcs~drnayVw~~~~~~---~WkptlvLlRiNrAAt~V~WsP~enkFAVg 118 (361)
T KOG1523|consen 44 LWEPAHTLSEHDKIVTGVDWAPK--SNRIVTCSHDRNAYVWTQPSGG---TWKPTLVLLRINRAATCVKWSPKENKFAVG 118 (361)
T ss_pred CceeceehhhhCcceeEEeecCC--CCceeEccCCCCccccccCCCC---eeccceeEEEeccceeeEeecCcCceEEec
Confidence 47777889999999999999998 8999999999999999985442 23322222 226789999999999998776
Q ss_pred -----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEcc-----C---Ccccc-----eee
Q psy13207 93 -----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV-----M---GTRFD-----IET 145 (197)
Q Consensus 93 -----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~-----~---~~~~~-----~~~ 145 (197)
+.+|- -+.+...+++.|.++.|+++..+|++|+.|+..|+|..- . ...+. +++
T Consensus 119 Sgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~l 198 (361)
T KOG1523|consen 119 SGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQL 198 (361)
T ss_pred cCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHH
Confidence 33333 222333678889999999888888999999999998531 1 11111 334
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+.++....+++..+.|+|+|..|+-.+.|.++.+=|...+.
T Consensus 199 m~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 199 MSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred HHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 44555567899999999999999999999999999887654
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-16 Score=120.99 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=126.9
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE--
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE-- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-- 97 (197)
...+++++.++. |++.+.|...|+|-+|+++++.....+. ....++.+|+.++....++.+.++ +.+|+
T Consensus 448 ~~~~~av~vs~C--GNF~~IG~S~G~Id~fNmQSGi~r~sf~--~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~ 523 (910)
T KOG1539|consen 448 DINATAVCVSFC--GNFVFIGYSKGTIDRFNMQSGIHRKSFG--DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFK 523 (910)
T ss_pred CcceEEEEEecc--CceEEEeccCCeEEEEEcccCeeecccc--cCccccCceeEEEecCCCceEEEccCcceEEEEecC
Confidence 367899999998 9999999999999999999986554442 223448899999999888877654 78999
Q ss_pred ----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 98 ----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
+..+. -...+.++.++ ...+ +.+..|-.|+++|..+ .+.++.+.+|.+.|++++|||||++|+++
T Consensus 524 ~k~l~~~l~--l~~~~~~iv~hr~s~l~--a~~~ddf~I~vvD~~t-----~kvvR~f~gh~nritd~~FS~DgrWlisa 594 (910)
T KOG1539|consen 524 KKVLKKSLR--LGSSITGIVYHRVSDLL--AIALDDFSIRVVDVVT-----RKVVREFWGHGNRITDMTFSPDGRWLISA 594 (910)
T ss_pred Ccceeeeec--cCCCcceeeeeehhhhh--hhhcCceeEEEEEchh-----hhhhHHhhccccceeeeEeCCCCcEEEEe
Confidence 22222 34567778887 6677 8999999999999977 78889999999999999999999999999
Q ss_pred eCCCcEEEEEcCCCcchhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~ 190 (197)
+.|++|++||+.++..+-.
T Consensus 595 smD~tIr~wDlpt~~lID~ 613 (910)
T KOG1539|consen 595 SMDSTIRTWDLPTGTLIDG 613 (910)
T ss_pred ecCCcEEEEeccCcceeee
Confidence 9999999999999876543
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-15 Score=102.56 Aligned_cols=158 Identities=11% Similarity=0.169 Sum_probs=125.3
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
+.+|..+++.+.++.+ |.+|+||+.|.+..+|-...++.+.++. -+...|.|+..+.+.+.+.++ +++
T Consensus 6 l~GHERplTqiKyN~e--GDLlFscaKD~~~~vw~s~nGerlGty~-----GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNRE--GDLLFSCAKDSTPTVWYSLNGERLGTYD-----GHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred cccCccccceEEecCC--CcEEEEecCCCCceEEEecCCceeeeec-----CCCceEEEEEecCCcceeeeccccceeEE
Confidence 6799999999999999 9999999999999999987777654443 126789999999999998766 799
Q ss_pred EE------eeEecccCCCceeEEEEc--CCCeEEEEeeC-----CCeEEEEEccCCc--ccceeeeeeecCceecEEEEE
Q psy13207 96 YE------AHSINAEHKDLIHDVAYD--YYGLRMATCSS-----DQNIKVTRDVMGT--RFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 96 ~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~-----d~~i~~~d~~~~~--~~~~~~~~~~~~h~~~v~~~~ 160 (197)
|| +...+ -...|..+.|+ ++++ +.+.. .+.|.++|++... ....++...+..+...++..-
T Consensus 79 WDv~tGk~la~~k--~~~~Vk~~~F~~~gn~~--l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~ 154 (327)
T KOG0643|consen 79 WDVETGKQLATWK--TNSPVKRVDFSFGGNLI--LASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSAL 154 (327)
T ss_pred EEcCCCcEEEEee--cCCeeEEEeeccCCcEE--EEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeee
Confidence 99 44443 56789999999 5544 33333 3678999997421 112345666777788999999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
|.|-+++|++|..||.|..||++++++..
T Consensus 155 Wg~l~~~ii~Ghe~G~is~~da~~g~~~v 183 (327)
T KOG0643|consen 155 WGPLGETIIAGHEDGSISIYDARTGKELV 183 (327)
T ss_pred ecccCCEEEEecCCCcEEEEEcccCceee
Confidence 99999999999999999999999976543
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.1e-15 Score=112.32 Aligned_cols=153 Identities=22% Similarity=0.325 Sum_probs=118.5
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccce----eEEEE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNSI----SIMYE 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~ 97 (197)
-.++|.+++|+.. .+.||.+-.||.|-||++... |-....+.+ ...+.+++|.+.++.+-++ +.-||
T Consensus 24 ~Ps~I~slA~s~k--S~~lAvsRt~g~IEiwN~~~~-----w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwD 96 (691)
T KOG2048|consen 24 KPSEIVSLAYSHK--SNQLAVSRTDGNIEIWNLSNN-----WFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWD 96 (691)
T ss_pred eccceEEEEEecc--CCceeeeccCCcEEEEccCCC-----ceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEe
Confidence 3678999999998 778999999999999999864 333333333 6789999999888876444 78899
Q ss_pred ee------EecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE
Q psy13207 98 AH------SINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 98 ~~------~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 169 (197)
++ .+. .....|.+++.+ .+.+ +.||+||.+..++.... ..+.-..+...++.|.+++|+|++..++
T Consensus 97 l~~lk~~~~~d-~~gg~IWsiai~p~~~~l--~IgcddGvl~~~s~~p~---~I~~~r~l~rq~sRvLslsw~~~~~~i~ 170 (691)
T KOG2048|consen 97 LHTLKQKYNID-SNGGAIWSIAINPENTIL--AIGCDDGVLYDFSIGPD---KITYKRSLMRQKSRVLSLSWNPTGTKIA 170 (691)
T ss_pred cccCceeEEec-CCCcceeEEEeCCccceE--EeecCCceEEEEecCCc---eEEEEeecccccceEEEEEecCCccEEE
Confidence 33 334 566789999999 5555 89999997777777541 1223334555578999999999999999
Q ss_pred EEeCCCcEEEEEcCCCcchh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~ 189 (197)
+|+.||.|++||+.++....
T Consensus 171 ~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 171 GGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred ecccCceEEEEEcCCCceEE
Confidence 99999999999998876543
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-15 Score=115.59 Aligned_cols=173 Identities=20% Similarity=0.335 Sum_probs=112.5
Q ss_pred cccceeeee-----eeecCCCcceeEEEECCCCCCc---EEEEEeCCCcEEEEEcCCcccccceeccc-eec--c----C
Q psy13207 10 KCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGL---VLATCAADGLVRIYEAPDVMNLSQWCLQH-EVA--C----P 74 (197)
Q Consensus 10 ~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~---~l~s~~~dg~v~iw~~~~~~~~~~~~~~~-~~~--~----~ 74 (197)
..+.+|++. .++.+|..+|+|+.|.|. .+ ++++|+.|++|++|.++.........+.. ... + .
T Consensus 34 ~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~--s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~ 111 (764)
T KOG1063|consen 34 PAIAVADPEKILIVTTLDGHVARVNCVHWLPT--SEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARS 111 (764)
T ss_pred ceEEEeCcccceeEEeccCCccceEEEEEccc--ccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeee
Confidence 344555443 458899999999999997 65 89999999999999998432222111111 000 0 0
Q ss_pred CCeee-------EEEccCCCc---------------------------cc--ce-----eEEEE--------eeEecccC
Q psy13207 75 TLASC-------LTWNHSFSR---------------------------FN--SI-----SIMYE--------AHSINAEH 105 (197)
Q Consensus 75 ~~~~~-------~~~~~~~~~---------------------------~~--~~-----~~~~~--------~~~~~~~~ 105 (197)
..+.+ -.|+.++.. ++ .+ +.+|. +..+. +|
T Consensus 112 ~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~-GH 190 (764)
T KOG1063|consen 112 SVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELE-GH 190 (764)
T ss_pred eEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEee-cc
Confidence 00011 112221111 10 00 12222 55677 99
Q ss_pred CCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCccc-------------c---eeee----------eeecCceecE
Q psy13207 106 KDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRF-------------D---IETI----------GNFEDHYCTV 156 (197)
Q Consensus 106 ~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~-------------~---~~~~----------~~~~~h~~~v 156 (197)
...|++++|+ ++.+++++++.|..||+|.+.-.... + .... ..+.||.++|
T Consensus 191 ~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV 270 (764)
T KOG1063|consen 191 TDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWV 270 (764)
T ss_pred chhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccce
Confidence 9999999999 55777899999999999976532100 0 0011 1234999999
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 157 WRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 157 ~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+++.|+|.+..|+++|.|.++.+|.....
T Consensus 271 ~sv~W~p~~~~LLSASaDksmiiW~pd~~ 299 (764)
T KOG1063|consen 271 YSVWWHPEGLDLLSASADKSMIIWKPDEN 299 (764)
T ss_pred EEEEEccchhhheecccCcceEEEecCCc
Confidence 99999999999999999999999987653
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-15 Score=117.25 Aligned_cols=172 Identities=19% Similarity=0.226 Sum_probs=133.3
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 92 (197)
.|++..++.+|.+.|+++.|.-.+....+++++.|..|++-..+.......+........+..+..++..|..++++++
T Consensus 536 ny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c 615 (1080)
T KOG1408|consen 536 NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC 615 (1080)
T ss_pred ccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence 3445567899999999999988722377999999998876544432222223333333346778999999999998776
Q ss_pred ----eEEEE------eeEecc--cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ----SIMYE------AHSINA--EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ----~~~~~------~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
++||+ .+.|+. +|......+...|..+++++.+.|+++.++|.-+ ++++..+.+|...|+.+.
T Consensus 616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s-----gEcvA~m~GHsE~VTG~k 690 (1080)
T KOG1408|consen 616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS-----GECVAQMTGHSEAVTGVK 690 (1080)
T ss_pred cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc-----chhhhhhcCcchheeeee
Confidence 89999 555653 3445566666667777779999999999999976 899999999999999999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
|.+|-+.|++.+.||.|.+|.+.....+..
T Consensus 691 F~nDCkHlISvsgDgCIFvW~lp~~mii~m 720 (1080)
T KOG1408|consen 691 FLNDCKHLISVSGDGCIFVWKLPLTMIIRM 720 (1080)
T ss_pred ecccchhheeecCCceEEEEECchhHhHHH
Confidence 999999999999999999999976444443
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.7e-15 Score=115.84 Aligned_cols=166 Identities=14% Similarity=0.186 Sum_probs=124.9
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++++..|.+. ..+...+-++.+++|+.+ |+.+|.||.|-.|++-++.+......+ ..++.+|.++.
T Consensus 73 s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~--g~~iaagsdD~~vK~~~~~D~s~~~~l-----rgh~apVl~l~ 145 (933)
T KOG1274|consen 73 SEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGS--GKMIAAGSDDTAVKLLNLDDSSQEKVL-----RGHDAPVLQLS 145 (933)
T ss_pred eccceEEEeeCCCCCccceeeeeeccceEEEEecC--CcEEEeecCceeEEEEeccccchheee-----cccCCceeeee
Confidence 344555555432 234556779999999998 999999999999999998876433211 12378999999
Q ss_pred EccCCCcccce-----eEEEEee------Eec---c---c-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 82 WNHSFSRFNSI-----SIMYEAH------SIN---A---E-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~~------~~~---~---~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
|+|.+.+||+. +++|++. ++. . . ....+..++|+|+.-.|+..+.|+.|++|+... +
T Consensus 146 ~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~-----w 220 (933)
T KOG1274|consen 146 YDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKG-----W 220 (933)
T ss_pred EcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCC-----c
Confidence 99999999865 7999911 111 0 1 134567789996544448899999999999876 5
Q ss_pred eeeeeecC--ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 144 ETIGNFED--HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 144 ~~~~~~~~--h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
+....+.. +...+.++.|+|+|+|||+++.||.|.|||+.+
T Consensus 221 e~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 221 ELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred eeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 55555543 344589999999999999999999999999986
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-16 Score=125.75 Aligned_cols=171 Identities=13% Similarity=0.212 Sum_probs=137.1
Q ss_pred CCcccccccceeeeeee-----e--cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 4 SPLQSEKCLNQWTRRSN-----L--VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~~~-----~--~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
.+++.++.+-+|++.+. + ..-.+.|.+++|+.. ..+.|++++.+|++.|||++..+.+-.+. .......
T Consensus 133 ASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrk-vqhILAS~s~sg~~~iWDlr~~~pii~ls---~~~~~~~ 208 (1049)
T KOG0307|consen 133 ASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRK-VSHILASGSPSGRAVIWDLRKKKPIIKLS---DTPGRMH 208 (1049)
T ss_pred eccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchh-hhHHhhccCCCCCceeccccCCCcccccc---cCCCccc
Confidence 46788999999998762 1 123567999999984 26789999999999999999875443222 1122356
Q ss_pred eeeEEEccCCCc-ccce--------eEEEE-------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccC
Q psy13207 77 ASCLTWNHSFSR-FNSI--------SIMYE-------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 77 ~~~~~~~~~~~~-~~~~--------~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
+..+.|+|+... ++.+ +.+|| ++.+. +|...|.++.|+ ++++ ++++.|+.|.+|+.++
T Consensus 209 ~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~-~H~~GilslsWc~~D~~ll--lSsgkD~~ii~wN~~t 285 (1049)
T KOG0307|consen 209 CSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILE-GHQRGILSLSWCPQDPRLL--LSSGKDNRIICWNPNT 285 (1049)
T ss_pred eeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhc-ccccceeeeccCCCCchhh--hcccCCCCeeEecCCC
Confidence 889999999865 3222 79999 66676 899999999999 4566 9999999999999987
Q ss_pred CcccceeeeeeecCceecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 138 GTRFDIETIGNFEDHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 138 ~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
++.+..+....+++..+.|+|. -..+++++.||.|.|+.+....
T Consensus 286 -----gEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 286 -----GEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred -----ceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 7888888888899999999995 4589999999999999987644
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=107.37 Aligned_cols=168 Identities=15% Similarity=0.202 Sum_probs=111.9
Q ss_pred cccccccceeeeeee--------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc------ce-
Q psy13207 6 LQSEKCLNQWTRRSN--------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ------HE- 70 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~--------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~------~~- 70 (197)
..+|.++|+|+++.. +.+|.+.|.++.|+++ |.+|++|+.|.++++|+++..+....+... .+
T Consensus 154 ~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~--gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~ 231 (385)
T KOG1034|consen 154 ASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLD--GDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTT 231 (385)
T ss_pred ecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCC--CCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCcc
Confidence 578999999998752 5689999999999999 999999999999999999854211111100 00
Q ss_pred --e--------------ccCCCeeeEEEccCCCccc-----ceeEEEE--------------------eeEecccCCCce
Q psy13207 71 --V--------------ACPTLASCLTWNHSFSRFN-----SISIMYE--------------------AHSINAEHKDLI 109 (197)
Q Consensus 71 --~--------------~~~~~~~~~~~~~~~~~~~-----~~~~~~~--------------------~~~~~~~~~~~i 109 (197)
+ .+...|.|+.|-. +++. .+|..|. +..++ -..-.|
T Consensus 232 ~pfpt~~~~fp~fst~diHrnyVDCvrw~g--d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~-~~~c~i 308 (385)
T KOG1034|consen 232 RPFPTPKTHFPDFSTTDIHRNYVDCVRWFG--DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFD-YPMCDI 308 (385)
T ss_pred CcCCccccccccccccccccchHHHHHHHh--hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEec-cCccce
Confidence 0 0122233333322 1111 1255565 22222 233456
Q ss_pred eEEEEc----CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec--CceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 110 HDVAYD----YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE--DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 110 ~~~~~~----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..+.|. ...+ +.|...|.|.+||+++.... ...++. .....|...+|+.||.+|+..+.|++|.-||..
T Consensus 309 Wfirf~~d~~~~~l--a~gnq~g~v~vwdL~~~ep~---~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 309 WFIRFAFDPWQKML--ALGNQSGKVYVWDLDNNEPP---KCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred EEEEEeecHHHHHH--hhccCCCcEEEEECCCCCCc---cCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 777777 4555 99999999999999874221 111121 124578999999999999999999999999864
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-16 Score=116.58 Aligned_cols=133 Identities=19% Similarity=0.207 Sum_probs=107.1
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
+..++++.|.||++.|+|++|+.+ |.+|++||.|-++.|||.-.-+.
T Consensus 38 rrL~lE~eL~GH~GCVN~LeWn~d--G~lL~SGSDD~r~ivWd~~~~Kl------------------------------- 84 (758)
T KOG1310|consen 38 RRLDLEAELTGHTGCVNCLEWNAD--GELLASGSDDTRLIVWDPFEYKL------------------------------- 84 (758)
T ss_pred hhcchhhhhccccceecceeecCC--CCEEeecCCcceEEeecchhcce-------------------------------
Confidence 334566789999999999999999 99999999999999999864432
Q ss_pred eEEEEeeEecccCCCceeEEEEc----CCCeEEEEeeCCCeEEEEEccCCcc-----cceeeeeeecCceecEEEEEEcc
Q psy13207 93 SIMYEAHSINAEHKDLIHDVAYD----YYGLRMATCSSDQNIKVTRDVMGTR-----FDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~s~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
++.+.++|...|.++.|- ...+ ++|..|..|++||+...+. --.+....+..|...|..++-.|
T Consensus 85 -----lhsI~TgHtaNIFsvKFvP~tnnriv--~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p 157 (758)
T KOG1310|consen 85 -----LHSISTGHTANIFSVKFVPYTNNRIV--LSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAP 157 (758)
T ss_pred -----eeeeecccccceeEEeeeccCCCeEE--EeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCC
Confidence 223334899999999998 3445 8999999999999974111 01234556778999999999999
Q ss_pred CC-CEEEEEeCCCcEEEEEcCCC
Q psy13207 164 TG-TIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 164 ~~-~~l~~~~~dg~i~iw~~~~~ 185 (197)
++ ..+.+++.||+|+=+|++..
T Consensus 158 ~~PhtfwsasEDGtirQyDiREp 180 (758)
T KOG1310|consen 158 NGPHTFWSASEDGTIRQYDIREP 180 (758)
T ss_pred CCCceEEEecCCcceeeecccCC
Confidence 88 88999999999999999864
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=109.57 Aligned_cols=155 Identities=18% Similarity=0.177 Sum_probs=126.0
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc---ceeccceecc-CCCeeeEEEccCCCcccce-----eEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS---QWCLQHEVAC-PTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
..+|..+.|.++. ...|+||+.|..|+||-+.....-. .......+.. ...+.++.|+|+|..++++ +.+
T Consensus 13 ~~pv~s~dfq~n~-~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 13 HEPVYSVDFQKNS-LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCceEEEEeccCc-ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 4689999999962 3499999999999999987654332 3344444443 7889999999999999887 667
Q ss_pred EE----------------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce
Q psy13207 96 YE----------------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY 153 (197)
Q Consensus 96 ~~----------------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~ 153 (197)
|. .+.+. +|...|..++|+++...+++++.|..+++||+.. +.....+..|.
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr-~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~-----G~l~~~~~dh~ 165 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLR-GHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHA-----GQLLAILDDHE 165 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEec-ccccchhhhhccCCCceeeeeeccceEEEEEecc-----ceeEeeccccc
Confidence 76 22344 7889999999995555559999999999999987 78899999999
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+..++|.|-++++++-+.|...+.+++...+
T Consensus 166 ~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~ 198 (434)
T KOG1009|consen 166 HYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQ 198 (434)
T ss_pred cccceeecchhhhhhhhhccCcccceeeeeeee
Confidence 999999999999999999999877777766543
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-14 Score=101.63 Aligned_cols=164 Identities=10% Similarity=0.072 Sum_probs=117.1
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
.|.-.|-.+-.... +.+|+|++.|..|.||+++ ++.+....-. ...-...+.+|+|++++++ +++|+
T Consensus 185 kh~v~~i~iGiA~~--~k~imsas~dt~i~lw~lk-Gq~L~~idtn-----q~~n~~aavSP~GRFia~~gFTpDVkVwE 256 (420)
T KOG2096|consen 185 KHQVDIINIGIAGN--AKYIMSASLDTKICLWDLK-GQLLQSIDTN-----QSSNYDAAVSPDGRFIAVSGFTPDVKVWE 256 (420)
T ss_pred hcccceEEEeecCC--ceEEEEecCCCcEEEEecC-Cceeeeeccc-----cccccceeeCCCCcEEEEecCCCCceEEE
Confidence 45556666666555 8999999999999999998 5544332211 2344677889999998766 78998
Q ss_pred --------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCC--cccceeeeeee----cCceecEE
Q psy13207 98 --------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMG--TRFDIETIGNF----EDHYCTVW 157 (197)
Q Consensus 98 --------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~--~~~~~~~~~~~----~~h~~~v~ 157 (197)
+..++ +|.+.|...+|+++--+++|.+.||..++||.+-. ...+...+... ......-.
T Consensus 257 ~~f~kdG~fqev~rvf~Lk-GH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~ 335 (420)
T KOG2096|consen 257 PIFTKDGTFQEVKRVFSLK-GHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV 335 (420)
T ss_pred EEeccCcchhhhhhhheec-cchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCce
Confidence 55667 99999999999955555599999999999998631 11112222222 11122334
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 158 RVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
.++.+|+|+.||.+. ...+.++..+.++...+++..-+
T Consensus 336 RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~ 373 (420)
T KOG2096|consen 336 RLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHS 373 (420)
T ss_pred EEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhc
Confidence 799999999887664 56899999999888877776543
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.5e-15 Score=106.47 Aligned_cols=153 Identities=18% Similarity=0.194 Sum_probs=114.9
Q ss_pred cceeEEEEC-------CCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eE
Q psy13207 26 TSVTDVKFG-------PKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SI 94 (197)
Q Consensus 26 ~~v~~~~~~-------~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 94 (197)
..|..-.|- |+ ..++++.+.|.-|.+||..+++....+..-.....-....++.|+|+|.+|.++ |+
T Consensus 105 ~tvydy~wYs~M~s~qP~--t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcir 182 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPS--TNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIR 182 (406)
T ss_pred CEEEEEEeeeccccCCCc--cceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEE
Confidence 356666664 44 678999999999999999999876655433222224566889999999988765 55
Q ss_pred EEE---------------------------------------------------------eeEecccCCCceeEEEEc--
Q psy13207 95 MYE---------------------------------------------------------AHSINAEHKDLIHDVAYD-- 115 (197)
Q Consensus 95 ~~~---------------------------------------------------------~~~~~~~~~~~i~~~~~~-- 115 (197)
+|+ +..+- +|...|+.++|.
T Consensus 183 vFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg-gh~gGvThL~~~ed 261 (406)
T KOG2919|consen 183 VFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG-GHGGGVTHLQWCED 261 (406)
T ss_pred EeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeec-ccCCCeeeEEeccC
Confidence 555 44555 789999999999
Q ss_pred CCCeEEEEeeC-CCeEEEEEccCCcccceeeeeeecCcee-cEEE--EEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 116 YYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFEDHYC-TVWR--VSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 116 ~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~h~~-~v~~--~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
++.+ .+|.+ |..|..||++.. ..++..+..|.. .-.. ....|++++|++|+.||.|++||++..+.
T Consensus 262 Gn~l--fsGaRk~dkIl~WDiR~~----~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 262 GNKL--FSGARKDDKILCWDIRYS----RDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN 331 (406)
T ss_pred cCee--cccccCCCeEEEEeehhc----cchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCC
Confidence 6666 88886 789999999852 556667777754 2222 55578999999999999999999998554
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=111.16 Aligned_cols=110 Identities=14% Similarity=0.209 Sum_probs=87.0
Q ss_pred CCCeeeEEEccCCCcccce----------eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC
Q psy13207 74 PTLASCLTWNHSFSRFNSI----------SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~----------~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
...+.+++.+|+++.++++ |++|+ ...+. .|.-.|+.++|+++.-+|++.++|.++.+|....
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~-~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~ 603 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELE-GHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQE 603 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheec-ccceEEEEEEECCCCcEEEEeecCceEEeeeeec
Confidence 4456677777777777654 58888 55677 8999999999996655559999999999998743
Q ss_pred CcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 138 GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 138 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.... .......+.|+.-|++++|+|++.+++|+|.|.+|.+|.....
T Consensus 604 ~~~~-e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 604 DIKD-EFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred ccch-hhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 2111 1223347789999999999999999999999999999998876
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.5e-14 Score=101.10 Aligned_cols=149 Identities=21% Similarity=0.295 Sum_probs=111.9
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMY 96 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 96 (197)
...+|.+++++.. +|+.+-++ .|+|||+++.+.+.+.... .+....+..++.++.+.+++. .+.+|
T Consensus 86 fpt~IL~VrmNr~----RLvV~Lee-~IyIydI~~MklLhTI~t~--~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~ 158 (391)
T KOG2110|consen 86 FPTSILAVRMNRK----RLVVCLEE-SIYIYDIKDMKLLHTIETT--PPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF 158 (391)
T ss_pred cCCceEEEEEccc----eEEEEEcc-cEEEEecccceeehhhhcc--CCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence 4568999998764 56666655 4999999998776544321 112345555666666667653 27999
Q ss_pred E------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeE-EEEEccCCcccceeeeeeecCc--eecEEEEEEccCCCE
Q psy13207 97 E------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNI-KVTRDVMGTRFDIETIGNFEDH--YCTVWRVSWNITGTI 167 (197)
Q Consensus 97 ~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i-~~~d~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~ 167 (197)
| +..+. .|...+-+++|+++.-+|||+++.|+| |||.+.+ ++.+.+++.- ...|.+++|+|++++
T Consensus 159 d~~nl~~v~~I~-aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~-----G~kl~eFRRG~~~~~IySL~Fs~ds~~ 232 (391)
T KOG2110|consen 159 DTINLQPVNTIN-AHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE-----GQKLYEFRRGTYPVSIYSLSFSPDSQF 232 (391)
T ss_pred EcccceeeeEEE-ecCCceeEEEECCCCCEEEEeccCceEEEEEEcCC-----ccEeeeeeCCceeeEEEEEEECCCCCe
Confidence 9 56677 899999999999444444999999875 8999976 6777777653 356899999999999
Q ss_pred EEEEeCCCcEEEEEcCCC
Q psy13207 168 VASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~ 185 (197)
|++.|..++|++|.+...
T Consensus 233 L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 233 LAASSNTETVHIFKLEKV 250 (391)
T ss_pred EEEecCCCeEEEEEeccc
Confidence 999999999999998754
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-15 Score=113.49 Aligned_cols=143 Identities=14% Similarity=0.263 Sum_probs=101.3
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~ 93 (197)
....+|.+++.+-+|+|+ |.-|+|+++||.|+||.-... . ..++. ...+|.|++|.|+...+.-+ +
T Consensus 98 ~sv~AH~~A~~~gRW~~d--GtgLlt~GEDG~iKiWSrsGM-L------RStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~ 168 (737)
T KOG1524|consen 98 RSISAHAAAISSGRWSPD--GAGLLTAGEDGVIKIWSRSGM-L------RSTVVQNEESIRCARWAPNSNSIVFCQGGHI 168 (737)
T ss_pred hhhhhhhhhhhhcccCCC--CceeeeecCCceEEEEeccch-H------HHHHhhcCceeEEEEECCCCCceEEecCCeE
Confidence 346789999999999999 999999999999999994322 1 22222 26789999999998765322 1
Q ss_pred EEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------------
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH------------- 152 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h------------- 152 (197)
.+=. +-.-. .|..-|.++.|+ .+.+ ++|++|-..++||.-. ..++.-..|
T Consensus 169 ~IKpL~~n~k~i~Wk-AHDGiiL~~~W~~~s~lI--~sgGED~kfKvWD~~G------~~Lf~S~~~ey~ITSva~npd~ 239 (737)
T KOG1524|consen 169 SIKPLAANSKIIRWR-AHDGLVLSLSWSTQSNII--ASGGEDFRFKIWDAQG------ANLFTSAAEEYAITSVAFNPEK 239 (737)
T ss_pred EEeecccccceeEEe-ccCcEEEEeecCccccce--eecCCceeEEeecccC------cccccCChhccceeeeeecccc
Confidence 1111 22223 899999999999 7778 9999999999999642 222222222
Q ss_pred ----------------eecEEEEEEccCCCEEEEEeCCCcEEE
Q psy13207 153 ----------------YCTVWRVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 153 ----------------~~~v~~~~~~p~~~~l~~~~~dg~i~i 179 (197)
.+.|..++|||||..+++|+..|.+.+
T Consensus 240 ~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 240 DYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 345667777777777777776666554
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-14 Score=104.29 Aligned_cols=145 Identities=15% Similarity=0.219 Sum_probs=106.3
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCC-cccce-----eEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFS-RFNSI-----SIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~-----~~~~~ 97 (197)
.++|+++.|+|. ...|++|+.||+++||.+....+. ..+.+. .+.++.+..|.|+|. .++++ ++.||
T Consensus 213 ~~~I~sv~FHp~--~plllvaG~d~~lrifqvDGk~N~----~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 213 HGGITSVQFHPT--APLLLVAGLDGTLRIFQVDGKVNP----KLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred cCCceEEEecCC--CceEEEecCCCcEEEEEecCccCh----hheeeeeccCccceeeecCCCceEEEecccceEEEEee
Confidence 468999999998 999999999999999999765432 122222 278999999999998 44443 56676
Q ss_pred -------------------eeEe-----------cccC--------------------CCceeEEEEc--CCCeEEEEee
Q psy13207 98 -------------------AHSI-----------NAEH--------------------KDLIHDVAYD--YYGLRMATCS 125 (197)
Q Consensus 98 -------------------~~~~-----------~~~~--------------------~~~i~~~~~~--~~~~~~~s~~ 125 (197)
++.+ . ++ ...|..++|+ +..+ ++++
T Consensus 287 le~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~-G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l--~~~~ 363 (514)
T KOG2055|consen 287 LETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIA-GNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKEL--LASG 363 (514)
T ss_pred ccccccccccCCCCcccchhheeEecCCCCeEEEc-ccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEE--EEEc
Confidence 0001 1 11 2345778888 5445 8889
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecE--EEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTV--WRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v--~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+|.|.+||+++ ..++..+.. .+.| ++++.+++|.|||+||..|.|.|||.++
T Consensus 364 ~~GeV~v~nl~~-----~~~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 364 GTGEVYVWNLRQ-----NSCLHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred CCceEEEEecCC-----cceEEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 999999999986 455555543 2233 5678889999999999999999999754
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.4e-15 Score=102.39 Aligned_cols=142 Identities=21% Similarity=0.343 Sum_probs=108.3
Q ss_pred ccccccceeeeeee------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRRSN------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~~------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..+.+++-|+++.. -.+|...|..+.|+|+ ...+|+||+.||.|+|||.+..+..
T Consensus 190 t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpn-kq~~lvt~gDdgyvriWD~R~tk~p------------------ 250 (370)
T KOG1007|consen 190 TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPN-KQHILVTCGDDGYVRIWDTRKTKFP------------------ 250 (370)
T ss_pred eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCC-ceEEEEEcCCCccEEEEeccCCCcc------------------
Confidence 45677788887742 2478899999999996 3578999999999999999875432
Q ss_pred EEccCCCcccceeEEEEeeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCC-------------------
Q psy13207 81 TWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMG------------------- 138 (197)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~------------------- 138 (197)
+..+. +|.-.+.++.|+ .+++ ++++.|..|.+|-..+.
T Consensus 251 -----------------v~el~-~HsHWvW~VRfn~~hdqLi--Ls~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~d 310 (370)
T KOG1007|consen 251 -----------------VQELP-GHSHWVWAVRFNPEHDQLI--LSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDED 310 (370)
T ss_pred -----------------ccccC-CCceEEEEEEecCccceEE--EecCCCceeEEEeccccccccccccccccccCcchh
Confidence 23344 899999999999 4455 99999999999854321
Q ss_pred -----cccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 139 -----TRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 139 -----~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+.++...+..+..|.+.|++++|+. |.-.||+-|+||++.|=++...-+
T Consensus 311 seer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r~~k 365 (370)
T KOG1007|consen 311 SEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPRFLK 365 (370)
T ss_pred hHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCChhhh
Confidence 0122334556778999999999987 667889999999999987765433
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.5e-14 Score=103.64 Aligned_cols=151 Identities=19% Similarity=0.272 Sum_probs=112.3
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
..+|....+.++.+|+ .+.++|++.|++++||+ ..+ ..|... -..++.|+.|+|.| .++.+ -.+
T Consensus 364 v~gh~delwgla~hps--~~q~~T~gqdk~v~lW~--~~k--~~wt~~----~~d~~~~~~fhpsg-~va~Gt~~G~w~V 432 (626)
T KOG2106|consen 364 VQGHGDELWGLATHPS--KNQLLTCGQDKHVRLWN--DHK--LEWTKI----IEDPAECADFHPSG-VVAVGTATGRWFV 432 (626)
T ss_pred EEecccceeeEEcCCC--hhheeeccCcceEEEcc--CCc--eeEEEE----ecCceeEeeccCcc-eEEEeeccceEEE
Confidence 3579999999999998 88999999999999999 221 223322 26789999999999 66555 234
Q ss_pred EE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 96 YE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 96 ~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
.| +..+. ..++++++++|+|+.-.||.|+.|+.|++|.+..+.. ....+.... ..+|+.+.|++|+++|.+
T Consensus 433 ~d~e~~~lv~~~-~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~-~y~r~~k~~--gs~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 433 LDTETQDLVTIH-TDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGR-KYSRVGKCS--GSPITHLDWSSDSQFLVS 508 (626)
T ss_pred EecccceeEEEE-ecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCc-EEEEeeeec--CceeEEeeecCCCceEEe
Confidence 44 33444 3378999999994444449999999999999865311 123333333 389999999999999999
Q ss_pred EeCCCcEEEEEcCCCc
Q psy13207 171 SGDDGCVRLWKLKKKR 186 (197)
Q Consensus 171 ~~~dg~i~iw~~~~~~ 186 (197)
.+.|-.|..|....-+
T Consensus 509 ~S~d~eiLyW~~~~~~ 524 (626)
T KOG2106|consen 509 NSGDYEILYWKPSECK 524 (626)
T ss_pred ccCceEEEEEccccCc
Confidence 9999999999554433
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-14 Score=106.12 Aligned_cols=146 Identities=14% Similarity=0.112 Sum_probs=113.9
Q ss_pred Ccccccccceeeeee--------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce
Q psy13207 5 PLQSEKCLNQWTRRS--------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~--------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
++.+|+.|..|.+.. .+..|+-+|+++...+.+...+|+|+|.|.++++||+..+..+..+.
T Consensus 140 TgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~---- 215 (476)
T KOG0646|consen 140 TGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT---- 215 (476)
T ss_pred ecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe----
Confidence 467899999997652 46789999999999875335789999999999999999986654433
Q ss_pred eccCCCeeeEEEccCCCcccce---eEEEE------------------------eeEecccCCC--ceeEEEEc--CCCe
Q psy13207 71 VACPTLASCLTWNHSFSRFNSI---SIMYE------------------------AHSINAEHKD--LIHDVAYD--YYGL 119 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------------~~~~~~~~~~--~i~~~~~~--~~~~ 119 (197)
.+..+.+++.+|-.+.+..+ ..+|. +..+. +|.. .|+|++.+ +..+
T Consensus 216 --fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~-Gh~~~~~ITcLais~DgtlL 292 (476)
T KOG0646|consen 216 --FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLV-GHENESAITCLAISTDGTLL 292 (476)
T ss_pred --cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeec-cccCCcceeEEEEecCccEE
Confidence 25688999999988776554 12222 44555 7877 99999999 7777
Q ss_pred EEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 120 RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 120 ~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
++|+.||.|+|||+.+ .++++.+....++|+.+.+.|-
T Consensus 293 --lSGd~dg~VcvWdi~S-----~Q~iRtl~~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 293 --LSGDEDGKVCVWDIYS-----KQCIRTLQTSKGPVTNLQINPL 330 (476)
T ss_pred --EeeCCCCCEEEEecch-----HHHHHHHhhhccccceeEeecc
Confidence 9999999999999976 6677776656778888888664
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.3e-15 Score=106.87 Aligned_cols=170 Identities=13% Similarity=0.149 Sum_probs=131.7
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|..|++|++. .+|.+..++|+.+.|.++ +..+++++.|+.+++|++...+...++.- +...++
T Consensus 193 gg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~--~~~~iAas~d~~~r~Wnvd~~r~~~TLsG-----HtdkVt 265 (459)
T KOG0288|consen 193 GGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSD--NKHVIAASNDKNLRLWNVDSLRLRHTLSG-----HTDKVT 265 (459)
T ss_pred cchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCC--CceEEeecCCCceeeeeccchhhhhhhcc-----ccccee
Confidence 4677788899764 357788899999999998 99999999999999999998766554442 267788
Q ss_pred eEEEccCCCcccce-----eEEEEeeEecc----cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYEAHSINA----EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
++.|......++++ ++.||+....+ -..+.++.|+.++..+ ++|..|+.|+.||.++ ..+....
T Consensus 266 ~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~--~SgH~DkkvRfwD~Rs-----~~~~~sv 338 (459)
T KOG0288|consen 266 AAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDV--ISGHFDKKVRFWDIRS-----ADKTRSV 338 (459)
T ss_pred eehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceee--eecccccceEEEeccC-----CceeeEe
Confidence 88888777654444 78899332220 1234566677666667 9999999999999987 5566666
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
..+. .|+++..+++|..+.+++.|.++.+.|+++.+-...
T Consensus 339 ~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~ 378 (459)
T KOG0288|consen 339 PLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQT 378 (459)
T ss_pred ecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEE
Confidence 6544 899999999999999999999999999998664433
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=4e-14 Score=99.12 Aligned_cols=170 Identities=12% Similarity=0.206 Sum_probs=128.7
Q ss_pred ccccccceeeeee--------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec
Q psy13207 7 QSEKCLNQWTRRS--------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72 (197)
Q Consensus 7 ~~~~~~~~w~~~~--------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 72 (197)
.....+|+|+... .-..+.++++++.|+.-. .+++.++|-|-+..|||+.++..- ....+-+.
T Consensus 118 Ts~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~d-p~~igtSSiDTTCTiWdie~~~~~--~vkTQLIA 194 (364)
T KOG0290|consen 118 TSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVD-PNLIGTSSIDTTCTIWDIETGVSG--TVKTQLIA 194 (364)
T ss_pred cccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCC-cceeEeecccCeEEEEEEeecccc--ceeeEEEe
Confidence 3455778997652 112467899999998742 679999999999999999986220 01123445
Q ss_pred cCCCeeeEEEccCCCcccce------eEEEEeeEec-------ccC-CCceeEEEEc---CCCeEEEEeeCC-CeEEEEE
Q psy13207 73 CPTLASCLTWNHSFSRFNSI------SIMYEAHSIN-------AEH-KDLIHDVAYD---YYGLRMATCSSD-QNIKVTR 134 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~-~~~i~~~~~~---~~~~~~~s~~~d-~~i~~~d 134 (197)
++..|..++|...+..++++ +++||++.+. ... ..+...++|+ ++++ ++-..| ..|.+.|
T Consensus 195 HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnym--ATf~~dS~~V~iLD 272 (364)
T KOG0290|consen 195 HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYM--ATFAMDSNKVVILD 272 (364)
T ss_pred cCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHH--hhhhcCCceEEEEE
Confidence 68899999999977765433 7999954433 111 4567789998 7777 887766 5789999
Q ss_pred ccCCcccceeeeeeecCceecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCC
Q psy13207 135 DVMGTRFDIETIGNFEDHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~ 185 (197)
++.. ..++..+++|...|+.++|.|. ...|.+++.|..+.+||+.+.
T Consensus 273 iR~P----~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 273 IRVP----CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred ecCC----CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence 9853 6788899999999999999994 689999999999999999764
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=105.67 Aligned_cols=168 Identities=13% Similarity=0.181 Sum_probs=129.0
Q ss_pred ccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeE
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (197)
.-++.+--|++.. .+....++|++++.+|. +..++.|+.||.+.+++...++... ...+.. +.++.++
T Consensus 87 g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~--~~~l~IgcddGvl~~~s~~p~~I~~----~r~l~rq~sRvLsl 160 (691)
T KOG2048|consen 87 GLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPE--NTILAIGCDDGVLYDFSIGPDKITY----KRSLMRQKSRVLSL 160 (691)
T ss_pred cCCceEEEEecccCceeEEecCCCcceeEEEeCCc--cceEEeecCCceEEEEecCCceEEE----EeecccccceEEEE
Confidence 4467778888764 45667789999999998 8999999999988888876654321 112222 5789999
Q ss_pred EEccCCCcccce-----eEEEEeeEecc---------c----CCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCccc
Q psy13207 81 TWNHSFSRFNSI-----SIMYEAHSINA---------E----HKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~~~~~~~---------~----~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
+|+|++..+++| |++||...-.+ + ...-|.++.|- +..+ ++|..-|+|.+||...
T Consensus 161 sw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI--~sgDS~G~V~FWd~~~---- 234 (691)
T KOG2048|consen 161 SWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTI--ASGDSAGTVTFWDSIF---- 234 (691)
T ss_pred EecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcE--EEecCCceEEEEcccC----
Confidence 999999987766 89999111110 1 11224455554 7888 9999999999999976
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+.++..+..|...|.+++..+++.++.+++.|+.|.-|.....+.
T Consensus 235 -gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 235 -GTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred -cchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcc
Confidence 788888899999999999999999999999999999988766543
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-14 Score=105.20 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=111.4
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE--
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE-- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-- 97 (197)
.+.|..+.|+.+ ++.|+.++.+|.|.+||++....+..|.-.. .-.-++++.++++.++|++ +.||+
T Consensus 344 eG~v~~~~fsSd--sk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G----~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~ 417 (514)
T KOG2055|consen 344 EGVVSDFTFSSD--SKELLASGGTGEVYVWNLRQNSCLHRFVDDG----SVHGTSLCISLNGSYLATGSDSGIVNIYDGN 417 (514)
T ss_pred ccEEeeEEEecC--CcEEEEEcCCceEEEEecCCcceEEEEeecC----ccceeeeeecCCCceEEeccCcceEEEeccc
Confidence 467899999988 8999999999999999999887665555322 2345778888999999987 68998
Q ss_pred ----------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC
Q psy13207 98 ----------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG 165 (197)
Q Consensus 98 ----------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 165 (197)
+..+. .....|+.++|+ .+.+.+++-..+..+|+-.+.+.+.+..-+.. ...-+.|+|++|+|.+
T Consensus 418 s~~~s~~PkPik~~d-NLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~--n~~vg~vtc~aFSP~s 494 (514)
T KOG2055|consen 418 SCFASTNPKPIKTVD-NLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTS--NTKVGHVTCMAFSPNS 494 (514)
T ss_pred hhhccCCCCchhhhh-hhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCC--CCcccceEEEEecCCC
Confidence 33333 345678999999 56663344445788999888763222221111 2234578999999999
Q ss_pred CEEEEEeCCCcEEEEEcC
Q psy13207 166 TIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 166 ~~l~~~~~dg~i~iw~~~ 183 (197)
.+||.|-.+|.+.+|.+.
T Consensus 495 G~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 495 GYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred ceEEeecCCCceeeEeec
Confidence 999999999999999875
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=94.62 Aligned_cols=156 Identities=16% Similarity=0.061 Sum_probs=109.8
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc-----eeccceeccCCCeeeEEEccCCCcccce----eEEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ-----WCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 97 (197)
.|.+-+++|. +++|+.|+.+|.|.++.+++...... ..+.....++.++..++|+. ++|.++ ++-|.
T Consensus 12 tvf~qa~sp~--~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~gdG~V~gw~ 87 (325)
T KOG0649|consen 12 TVFAQAISPS--KQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGGDGLVYGWE 87 (325)
T ss_pred HHHHHhhCCc--ceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeeccCceEEEee
Confidence 4556678998 99999999999999999875422111 11111122378899999983 233222 44444
Q ss_pred -------------eeEecccC-----CCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 98 -------------AHSINAEH-----KDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 98 -------------~~~~~~~~-----~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
.....+.| -..|+++-.. .+-+ +.++.|+.++-||+++ ++....+++|++.|.
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi--~~AgGD~~~y~~dlE~-----G~i~r~~rGHtDYvH 160 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSI--LFAGGDGVIYQVDLED-----GRIQREYRGHTDYVH 160 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcE--EEecCCeEEEEEEecC-----CEEEEEEcCCcceee
Confidence 00001012 2456777666 4455 6667999999999987 788899999999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 158 RVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
++.--.....+++|+.||++++||.++.++.+.++.
T Consensus 161 ~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 161 SVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred eeeecccCcceeecCCCccEEEEeccccceeEEecc
Confidence 999844445688999999999999999998877764
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-15 Score=119.63 Aligned_cols=116 Identities=26% Similarity=0.342 Sum_probs=102.0
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
.|.+|..+|+|..|... |.++++|+.|..++||...+...+...
T Consensus 185 rLlgH~naVyca~fDrt--g~~Iitgsdd~lvKiwS~et~~~lAs~---------------------------------- 228 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRT--GRYIITGSDDRLVKIWSMETARCLASC---------------------------------- 228 (1113)
T ss_pred HHHhhhhheeeeeeccc--cceEeecCccceeeeeeccchhhhccC----------------------------------
Confidence 36799999999999998 999999999999999998887654322
Q ss_pred EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEE
Q psy13207 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~i 179 (197)
. +|...|+.++.+.+.+++++++.|..|++|.+.. +.++..+.+|++.|++++|+|-. +.+.||++++
T Consensus 229 --r-Ghs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~-----~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~ 296 (1113)
T KOG0644|consen 229 --R-GHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD-----GAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRI 296 (1113)
T ss_pred --C-CCccccchhccchhhhhhhhcccCceEEEEecCC-----CchHHHHhccccceeeeccCccc----cCCCCCceEe
Confidence 2 8999999999995555569999999999999976 78889999999999999999954 6789999999
Q ss_pred EEcC
Q psy13207 180 WKLK 183 (197)
Q Consensus 180 w~~~ 183 (197)
||.+
T Consensus 297 wd~r 300 (1113)
T KOG0644|consen 297 WDAR 300 (1113)
T ss_pred cccc
Confidence 9998
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=107.72 Aligned_cols=155 Identities=21% Similarity=0.250 Sum_probs=115.4
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-ccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
.+|+...+.++|.|+ |++|.+|+.||.|++|+.... +....... ....+.+++-. +.+|+++ +..
T Consensus 10 yaht~G~t~i~~d~~--gefi~tcgsdg~ir~~~~~sd~e~P~ti~~-----~g~~v~~ia~~--s~~f~~~s~~~tv~~ 80 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPD--GEFICTCGSDGDIRKWKTNSDEEEPETIDI-----SGELVSSIACY--SNHFLTGSEQNTVLR 80 (933)
T ss_pred hhccCceEEEEEcCC--CCEEEEecCCCceEEeecCCcccCCchhhc-----cCceeEEEeec--ccceEEeeccceEEE
Confidence 478888999999999 999999999999999998765 22221110 23344454433 3344443 455
Q ss_pred EEeeEec-----ccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 96 YEAHSIN-----AEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 96 ~~~~~~~-----~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
|.+.... ....-++++++|+ +..+ +.|++|-.|++.+... ......+++|..+|.++.|+|++++|
T Consensus 81 y~fps~~~~~iL~Rftlp~r~~~v~g~g~~i--aagsdD~~vK~~~~~D-----~s~~~~lrgh~apVl~l~~~p~~~fL 153 (933)
T KOG1274|consen 81 YKFPSGEEDTILARFTLPIRDLAVSGSGKMI--AAGSDDTAVKLLNLDD-----SSQEKVLRGHDAPVLQLSYDPKGNFL 153 (933)
T ss_pred eeCCCCCccceeeeeeccceEEEEecCCcEE--EeecCceeEEEEeccc-----cchheeecccCCceeeeeEcCCCCEE
Confidence 5521111 0234578999999 5566 9999999999999865 56677889999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 169 ASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
|+.+.||.|++||+.++....++.
T Consensus 154 Avss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 154 AVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred EEEecCceEEEEEcccchhhhhcc
Confidence 999999999999999876655543
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=105.27 Aligned_cols=158 Identities=13% Similarity=0.206 Sum_probs=110.5
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-e-----eE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-I-----SI 94 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~ 94 (197)
..+|..+|.++.|.|. ...|++++.|.++++||+++.+.... ...+.+...+.+++|.|....+++ + +.
T Consensus 96 ~~aH~nAifDl~wapg--e~~lVsasGDsT~r~Wdvk~s~l~G~---~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~il 170 (720)
T KOG0321|consen 96 PLAHKNAIFDLKWAPG--ESLLVSASGDSTIRPWDVKTSRLVGG---RLNLGHTGSVKSECFMPTNPAVFCTGGRDGEIL 170 (720)
T ss_pred cccccceeEeeccCCC--ceeEEEccCCceeeeeeeccceeecc---eeecccccccchhhhccCCCcceeeccCCCcEE
Confidence 3479999999999995 78899999999999999998765421 123334678999999998876543 3 79
Q ss_pred EEEee---------------------------------EecccCCCc----eeEEEEc-CCCeEEEEeeC-CCeEEEEEc
Q psy13207 95 MYEAH---------------------------------SINAEHKDL----IHDVAYD-YYGLRMATCSS-DQNIKVTRD 135 (197)
Q Consensus 95 ~~~~~---------------------------------~~~~~~~~~----i~~~~~~-~~~~~~~s~~~-d~~i~~~d~ 135 (197)
+||++ .-. .+... |+.+.|- .+.+ ++++. |+.|+|||+
T Consensus 171 lWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~k-A~s~ti~ssvTvv~fkDe~tl--aSaga~D~~iKVWDL 247 (720)
T KOG0321|consen 171 LWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWK-AASNTIFSSVTVVLFKDESTL--ASAGAADSTIKVWDL 247 (720)
T ss_pred EEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccc-cccCceeeeeEEEEEecccee--eeccCCCcceEEEee
Confidence 99900 001 22223 3344554 5556 88887 999999999
Q ss_pred cCCcc-cceeeee--eecCc---eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 136 VMGTR-FDIETIG--NFEDH---YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~-~~~~~~~--~~~~h---~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+.... ...++.. .+..| .-.+.++.....|.+|.+.+.|++|++|++....
T Consensus 248 Rk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s 304 (720)
T KOG0321|consen 248 RKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLS 304 (720)
T ss_pred cccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccC
Confidence 86321 1122222 22233 3456778888888999988899999999998643
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.6e-14 Score=96.78 Aligned_cols=154 Identities=18% Similarity=0.166 Sum_probs=108.9
Q ss_pred CCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCccccccee----cccee-ccCCCeeeEEEccCCCc-ccce----
Q psy13207 24 SRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWC----LQHEV-ACPTLASCLTWNHSFSR-FNSI---- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~-~~~~---- 92 (197)
-.+.+.|..+..+... -+|+.|-++|++.+||+.++..+-++. ..... .++.++.++.+.+.... +..+
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dk 228 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDK 228 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccc
Confidence 4567888876543212 346677899999999999875433332 12211 13788999999875544 2111
Q ss_pred eEEEEe---------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 93 SIMYEA---------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 93 ~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
+.+|.+ ....+..+..+..+..-++.-.++|++-|+.||||..++ ..++..++.|...|++++|+|
T Consensus 229 l~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrt-----l~pLAVLkyHsagvn~vAfsp 303 (323)
T KOG0322|consen 229 LVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRT-----LNPLAVLKYHSAGVNAVAFSP 303 (323)
T ss_pred ceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEecc-----CCchhhhhhhhcceeEEEeCC
Confidence 344541 111112344566777765555559999999999999988 788899999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEc
Q psy13207 164 TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~ 182 (197)
+-.++|++|.|++|.+|++
T Consensus 304 d~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 304 DCELMAAASKDARISLWKL 322 (323)
T ss_pred CCchhhhccCCceEEeeec
Confidence 9999999999999999986
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=7e-14 Score=101.92 Aligned_cols=158 Identities=16% Similarity=0.238 Sum_probs=108.8
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEEEeeEe---
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYEAHSI--- 101 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--- 101 (197)
.+++|+++ |..+++++.||++|+|+..+...+ ....++...|.++.|+|+++.+++. .++|++...
T Consensus 148 k~vaf~~~--gs~latgg~dg~lRv~~~Ps~~t~-----l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~ 220 (398)
T KOG0771|consen 148 KVVAFNGD--GSKLATGGTDGTLRVWEWPSMLTI-----LEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVNTGAAL 220 (398)
T ss_pred eEEEEcCC--CCEeeeccccceEEEEecCcchhh-----hhhHhhcCccccceeCCCCcEEEEecCCceEEEEeccCchh
Confidence 78999998 999999999999999997765432 2233447789999999999998654 799993322
Q ss_pred ---c-ccCCCceeEEEEc----CCCeEEEE-eeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 102 ---N-AEHKDLIHDVAYD----YYGLRMAT-CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 102 ---~-~~~~~~i~~~~~~----~~~~~~~s-~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
. ..-......+.|. ...+++++ -..-+.|+.||+........-..+........|.+++.+++|+++|.|+
T Consensus 221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT 300 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGT 300 (398)
T ss_pred hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence 1 1223445667777 22333333 4455778888775411100011122222245789999999999999999
Q ss_pred CCCcEEEEEcCCCcchhhhhh
Q psy13207 173 DDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 173 ~dg~i~iw~~~~~~~~~~~~~ 193 (197)
.||.|-|++..+.+..+.+++
T Consensus 301 ~dGsVai~~~~~lq~~~~vk~ 321 (398)
T KOG0771|consen 301 MDGSVAIYDAKSLQRLQYVKE 321 (398)
T ss_pred cCCcEEEEEeceeeeeEeehh
Confidence 999999999988776555443
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-12 Score=89.62 Aligned_cols=146 Identities=14% Similarity=0.228 Sum_probs=94.4
Q ss_pred eEEEECCCCCCcEEEEEeC----------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------
Q psy13207 29 TDVKFGPKQLGLVLATCAA----------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------ 92 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (197)
..+.|+|. |++|+.-.. -+...||.++...... . .-.+....+|.+++|+|+++.++..
T Consensus 9 ~~~~W~~~--G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~--~-~i~l~~~~~I~~~~WsP~g~~favi~g~~~~ 83 (194)
T PF08662_consen 9 AKLHWQPS--GDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPV--E-SIELKKEGPIHDVAWSPNGNEFAVIYGSMPA 83 (194)
T ss_pred EEEEeccc--CCEEEEEEEEeeccCcceEEeeEEEEEEecCCCcc--c-eeeccCCCceEEEEECcCCCEEEEEEccCCc
Confidence 45789998 766554322 2345566654332110 0 1111224569999999999987543
Q ss_pred -eEEEEee---EecccCCCceeEEEEcCCCeEEEEeeC---CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC
Q psy13207 93 -SIMYEAH---SINAEHKDLIHDVAYDYYGLRMATCSS---DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG 165 (197)
Q Consensus 93 -~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 165 (197)
+.+|++. ... -+...++.+.|+|+.-+++.++. .|.|.+||.++ .+.+.... |. .+..++|+|+|
T Consensus 84 ~v~lyd~~~~~i~~-~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~-----~~~i~~~~-~~-~~t~~~WsPdG 155 (194)
T PF08662_consen 84 KVTLYDVKGKKIFS-FGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK-----KKKISTFE-HS-DATDVEWSPDG 155 (194)
T ss_pred ccEEEcCcccEeEe-ecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC-----CEEeeccc-cC-cEEEEEEcCCC
Confidence 7889921 112 33567789999944433377654 46799999975 55565554 22 46899999999
Q ss_pred CEEEEEeC------CCcEEEEEcCCCcch
Q psy13207 166 TIVASSGD------DGCVRLWKLKKKRKK 188 (197)
Q Consensus 166 ~~l~~~~~------dg~i~iw~~~~~~~~ 188 (197)
++|++++. |+.++||++. ++.+
T Consensus 156 r~~~ta~t~~r~~~dng~~Iw~~~-G~~l 183 (194)
T PF08662_consen 156 RYLATATTSPRLRVDNGFKIWSFQ-GRLL 183 (194)
T ss_pred CEEEEEEeccceeccccEEEEEec-CeEe
Confidence 99999874 7889999985 4443
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=104.62 Aligned_cols=175 Identities=13% Similarity=0.165 Sum_probs=115.2
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc--cccce-----------
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM--NLSQW----------- 65 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~--~~~~~----------- 65 (197)
...|.+++.|++.. .+.+|...|.+++|.|.+ ...|++|+.||.+.|||++-.. .+..+
T Consensus 118 asGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n-~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ 196 (720)
T KOG0321|consen 118 ASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTN-PAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTA 196 (720)
T ss_pred ccCCceeeeeeeccceeecceeecccccccchhhhccCC-CcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCC
Confidence 35678899999864 267999999999999974 6789999999999999987432 00000
Q ss_pred ----e-ccceec----cCCCeee---EEEccCCCcccce------eEEEEeeEecc-------------cC---CCceeE
Q psy13207 66 ----C-LQHEVA----CPTLASC---LTWNHSFSRFNSI------SIMYEAHSINA-------------EH---KDLIHD 111 (197)
Q Consensus 66 ----~-~~~~~~----~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~-------------~~---~~~i~~ 111 (197)
+ +...+. ....+.+ +.+..|..+|+++ +++||++.... .| ...+.+
T Consensus 197 ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~n 276 (720)
T KOG0321|consen 197 PTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVN 276 (720)
T ss_pred CCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEE
Confidence 0 000011 1233444 4555666666543 89999322210 22 123444
Q ss_pred EEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecE--EEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 112 VAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV--WRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 112 ~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v--~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+... +.++ .+.+.|+.|++|++.+ ....++..+.++...- ..-..+|++.++++|+.|+..++|.+.+..
T Consensus 277 L~lDssGt~L--~AsCtD~sIy~ynm~s---~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e 350 (720)
T KOG0321|consen 277 LILDSSGTYL--FASCTDNSIYFYNMRS---LSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE 350 (720)
T ss_pred EEecCCCCeE--EEEecCCcEEEEeccc---cCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc
Confidence 5544 5555 5666699999999986 3345566666653221 234568999999999999999999998754
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-13 Score=100.63 Aligned_cols=161 Identities=12% Similarity=0.111 Sum_probs=110.8
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc--cc----ce
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR--FN----SI 92 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~ 92 (197)
+..+-+..+|.+++|+|......+|+|..-|.|.+||+.+.+....-. ..-..+..+|.++.|+|...- +. ..
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v-~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt 258 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGV-YLFTPHSGPVSGLKFSPANTSQIYSSSYDGT 258 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCce-EEeccCCccccceEecCCChhheeeeccCce
Confidence 445678899999999997434788999999999999996332211100 001123678999999997643 22 22
Q ss_pred eEEEE--------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 SIMYE--------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 ~~~~~--------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
++.=| +.... .....+..+.|+ ...+ +.+..-|.+.+||.++. +.....+.-|...|..++++
T Consensus 259 iR~~D~~~~i~e~v~s~~-~d~~~fs~~d~~~e~~~v--l~~~~~G~f~~iD~R~~----~s~~~~~~lh~kKI~sv~~N 331 (498)
T KOG4328|consen 259 IRLQDFEGNISEEVLSLD-TDNIWFSSLDFSAESRSV--LFGDNVGNFNVIDLRTD----GSEYENLRLHKKKITSVALN 331 (498)
T ss_pred eeeeeecchhhHHHhhcC-ccceeeeeccccCCCccE--EEeecccceEEEEeecC----CccchhhhhhhcccceeecC
Confidence 45444 11111 233445666676 3334 56666679999999874 34455666788899999999
Q ss_pred c-CCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 163 I-TGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 163 p-~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
| ...+|||+|.|++++|||+++...
T Consensus 332 P~~p~~laT~s~D~T~kIWD~R~l~~ 357 (498)
T KOG4328|consen 332 PVCPWFLATASLDQTAKIWDLRQLRG 357 (498)
T ss_pred CCCchheeecccCcceeeeehhhhcC
Confidence 9 567899999999999999987543
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.9e-14 Score=105.04 Aligned_cols=95 Identities=21% Similarity=0.200 Sum_probs=76.4
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEeccc
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAE 104 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (197)
.+.|+..+|+|+ |++||+.++||.++|+|..+.+.+..++ .
T Consensus 290 ~g~in~f~FS~D--G~~LA~VSqDGfLRvF~fdt~eLlg~mk-------------------------------------S 330 (636)
T KOG2394|consen 290 EGSINEFAFSPD--GKYLATVSQDGFLRIFDFDTQELLGVMK-------------------------------------S 330 (636)
T ss_pred cccccceeEcCC--CceEEEEecCceEEEeeccHHHHHHHHH-------------------------------------h
Confidence 458999999998 9999999999999999998865442211 3
Q ss_pred CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 105 ~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
.-....|++|+|+.-++++|++|..|.||.+.. .+.+..-.+|+.+|..++|.|
T Consensus 331 YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~e-----rRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 331 YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEE-----RRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred hccceEEEEEcCCccEEEecCCcceEEEEEecc-----ceEEEeccccccceeeEeecc
Confidence 345566677764444449999999999999965 788888899999999999983
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-13 Score=99.52 Aligned_cols=165 Identities=16% Similarity=0.158 Sum_probs=122.2
Q ss_pred cccccccceee-eee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWT-RRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~-~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++|+|+ +.- ....|.+.|.++.|+|+ |++|++.+.| ..++|+.+++..+.... ....+.....+
T Consensus 162 gg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~d--gk~lasig~d-~~~VW~~~~g~~~a~~t---~~~k~~~~~~c 235 (398)
T KOG0771|consen 162 GGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPD--GKFLASIGAD-SARVWSVNTGAALARKT---PFSKDEMFSSC 235 (398)
T ss_pred ccccceEEEEecCcchhhhhhHhhcCccccceeCCC--CcEEEEecCC-ceEEEEeccCchhhhcC---Ccccchhhhhc
Confidence 46789999999 322 35679999999999999 9999999999 99999999985543322 12235667788
Q ss_pred EEccCCC---cc-cce------eEEEEee-----------EecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccC
Q psy13207 81 TWNHSFS---RF-NSI------SIMYEAH-----------SINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 81 ~~~~~~~---~~-~~~------~~~~~~~-----------~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
.|+.++. ++ ++. ++.|++. ... .-...|.+++.+ +.++ +.|+.||.|-+++..+
T Consensus 236 RF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~-~~~~siSsl~VS~dGkf~--AlGT~dGsVai~~~~~ 312 (398)
T KOG0771|consen 236 RFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKI-KRFKSISSLAVSDDGKFL--ALGTMDGSVAIYDAKS 312 (398)
T ss_pred eecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhh-hccCcceeEEEcCCCcEE--EEeccCCcEEEEEece
Confidence 8887762 21 111 3333311 111 123478889988 6667 9999999999999865
Q ss_pred Ccccceeeee-eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 138 GTRFDIETIG-NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 138 ~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+.+. .-+.|...|+.+.|+|+.+++++.+.|....+..+..
T Consensus 313 -----lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 313 -----LQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred -----eeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 44443 3457999999999999999999999999999987754
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.2e-12 Score=94.53 Aligned_cols=167 Identities=8% Similarity=0.010 Sum_probs=110.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
...++.++.|+.. ..+..+. .+.++.|+|+ +..+ ++++.++.|++||..+++....+. ....+..
T Consensus 7 ~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~ 77 (300)
T TIGR03866 7 NEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKD--GKLLYVCASDSDTIQVIDLATGEVIGTLP------SGPDPEL 77 (300)
T ss_pred ecCCCEEEEEECCCCceEEEEECCC-CCCceEECCC--CCEEEEEECCCCeEEEEECCCCcEEEecc------CCCCccE
Confidence 3457788888864 2344443 4678999998 7765 677889999999998775433221 2233567
Q ss_pred EEEccCCCcccce------eEEEEe------eEecccCCCceeEEEEcCCCeEEEEeeCCC-eEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNSI------SIMYEA------HSINAEHKDLIHDVAYDYYGLRMATCSSDQ-NIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~~------~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~-~i~~~d~~~~~~~~~~~~ 146 (197)
+.|+|+++.++.+ +.+||+ ..+. +...+.+++|+++.-+++++..++ .+.+||.++ ....
T Consensus 78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~-----~~~~ 150 (300)
T TIGR03866 78 FALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP--VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKT-----YEIV 150 (300)
T ss_pred EEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee--CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCC-----CeEE
Confidence 8999999876432 788982 2222 234467899984443337777664 567789865 3333
Q ss_pred eeecCceecEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCcchh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASS-GDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~~~~~ 189 (197)
..... ...+.+++|+|++++|+.+ ..++.|.+||+++.+...
T Consensus 151 ~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~ 193 (300)
T TIGR03866 151 DNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIK 193 (300)
T ss_pred EEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeee
Confidence 22221 2345779999999988655 469999999998875443
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-12 Score=97.38 Aligned_cols=170 Identities=15% Similarity=0.158 Sum_probs=124.2
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEE--eCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATC--AADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~--~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+....+|+|+-. +.+......|.|++|++.+.|.+|... +.+..+.+||.+.+......+- ..+.+..
T Consensus 131 ~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~-----sne~v~~ 205 (626)
T KOG2106|consen 131 PLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKT-----SNEVVFL 205 (626)
T ss_pred cCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCccee-----ccceEEE
Confidence 445688999833 234556778999999997656666555 5667889999887654432221 1567889
Q ss_pred EEEccCCCcccce-----eEEEE---------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCccccee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
..|+|....+... +.+|+ ...+.......|.|++|. ...+ +||.++|.|.+|+.++ ..
T Consensus 206 a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdv--iTgDS~G~i~Iw~~~~-----~~ 278 (626)
T KOG2106|consen 206 ATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDV--ITGDSGGNILIWSKGT-----NR 278 (626)
T ss_pred EEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCE--EeecCCceEEEEeCCC-----ce
Confidence 9999998876543 78888 223442334789999999 6667 8999999999999976 44
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
..+...+|.+.|.+++.-.+|.+| +|+.|..|..|| .+.++.++
T Consensus 279 ~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd-~~y~k~r~ 322 (626)
T KOG2106|consen 279 ISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWD-DNYRKLRE 322 (626)
T ss_pred EEeEeeecCCceEEEEEecCccEe-ecCccceEEecc-cccccccc
Confidence 455555899999999999999855 499999999999 33333333
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.6e-13 Score=92.29 Aligned_cols=162 Identities=16% Similarity=0.234 Sum_probs=112.9
Q ss_pred ccccceeeeee--------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeee
Q psy13207 9 EKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASC 79 (197)
Q Consensus 9 ~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (197)
|-+-.+|+++. .|-+|...|..++|... ..+.||+++.||.+++||++..+-- +....-+. ..+..-
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~-s~~~FASvgaDGSvRmFDLR~leHS---TIIYE~p~~~~pLlR 247 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKG-SRDVFASVGADGSVRMFDLRSLEHS---TIIYEDPSPSTPLLR 247 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEEeccC-ccceEEEecCCCcEEEEEecccccc---eEEecCCCCCCccee
Confidence 34456777654 36689999999999985 2578999999999999999875411 11111111 456778
Q ss_pred EEEccCCCc-ccce------eEEEE-------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcc-c
Q psy13207 80 LTWNHSFSR-FNSI------SIMYE-------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTR-F 141 (197)
Q Consensus 80 ~~~~~~~~~-~~~~------~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~-~ 141 (197)
++|+++... +|+- +.+.| +..+. +|...|++|+|. +..+ +||+.|..+.+||+.+.-. .
T Consensus 248 LswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~-~H~a~VNgIaWaPhS~~hi--ctaGDD~qaliWDl~q~~~~~ 324 (364)
T KOG0290|consen 248 LSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLR-NHQASVNGIAWAPHSSSHI--CTAGDDCQALIWDLQQMPREN 324 (364)
T ss_pred eccCcCCchHHhhhhcCCceEEEEEecCCCcceehhh-cCcccccceEecCCCCcee--eecCCcceEEEEecccccccC
Confidence 888886644 4332 67777 66777 899999999999 5566 9999999999999975321 1
Q ss_pred ceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEE
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRL 179 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~i 179 (197)
...++..+. ..+.|+.+.|+| .+..++.+. ++.+.+
T Consensus 325 ~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~-~kklei 361 (364)
T KOG0290|consen 325 GEDPILAYT-AGGEVNQIQWSSSQPDWIAICF-GKKLEI 361 (364)
T ss_pred CCCchhhhh-ccceeeeeeecccCCCEEEEEe-cCeeeE
Confidence 112333333 367899999997 567777765 444444
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=99.43 Aligned_cols=137 Identities=17% Similarity=0.241 Sum_probs=108.5
Q ss_pred CCcccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 4 SPLQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 4 ~~~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
.++..|.++.+|+.- ..|.+|...|--+.|+|.. .+.|+|++.|++|+|||+.+++.+-+
T Consensus 98 ASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA-~NVLlsag~Dn~v~iWnv~tgeali~------- 169 (472)
T KOG0303|consen 98 ASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA-PNVLLSAGSDNTVSIWNVGTGEALIT------- 169 (472)
T ss_pred ecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc-hhhHhhccCCceEEEEeccCCceeee-------
Confidence 357888999999753 3588999999999999963 57899999999999999999864311
Q ss_pred ccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 72 ACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+ .|...|.++.|+ +..+ ++.+.|+.|||||.++ ++.+.+-
T Consensus 170 -----------------------------l--~hpd~i~S~sfn~dGs~l--~TtckDKkvRv~dpr~-----~~~v~e~ 211 (472)
T KOG0303|consen 170 -----------------------------L--DHPDMVYSMSFNRDGSLL--CTTCKDKKVRVIDPRR-----GTVVSEG 211 (472)
T ss_pred -----------------------------c--CCCCeEEEEEeccCCcee--eeecccceeEEEcCCC-----CcEeeec
Confidence 1 588889999999 6666 9999999999999987 6777776
Q ss_pred cCceec-EEEEEEccCCCEEEEE---eCCCcEEEEEcCCCc
Q psy13207 150 EDHYCT-VWRVSWNITGTIVASS---GDDGCVRLWKLKKKR 186 (197)
Q Consensus 150 ~~h~~~-v~~~~~~p~~~~l~~~---~~dg~i~iw~~~~~~ 186 (197)
.+|.+. -....|-.+|.++.+| ..+..+-+||..+..
T Consensus 212 ~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~ 252 (472)
T KOG0303|consen 212 VAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLE 252 (472)
T ss_pred ccccCCCcceeEEeccCceeeeccccccccceeccCccccc
Confidence 777643 3556777788855544 257889999887654
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.6e-13 Score=96.12 Aligned_cols=146 Identities=11% Similarity=0.094 Sum_probs=76.5
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEEeeEec
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYEAHSIN 102 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 102 (197)
-.|+.|++. |.+||.|+.||.|.|||+.+-..-+.+. .+-.+|.+++|+++|+.|.++ +.+||+..
T Consensus 26 a~~~~Fs~~--G~~lAvGc~nG~vvI~D~~T~~iar~ls-----aH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~-- 96 (405)
T KOG1273|consen 26 AECCQFSRW--GDYLAVGCANGRVVIYDFDTFRIARMLS-----AHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLK-- 96 (405)
T ss_pred cceEEeccC--cceeeeeccCCcEEEEEccccchhhhhh-----ccccceeEEEecCCCCEeeeecCCceeEEEeccC--
Confidence 789999998 9999999999999999998754211111 013355555555555555443 34444211
Q ss_pred ccCCCceeEEEEc---------CCCe-EEEEeeCCCeEEEEEccCCcccceeeeeee-cCc-eecEEEEEEccCCCEEEE
Q psy13207 103 AEHKDLIHDVAYD---------YYGL-RMATCSSDQNIKVTRDVMGTRFDIETIGNF-EDH-YCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 103 ~~~~~~i~~~~~~---------~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~h-~~~v~~~~~~p~~~~l~~ 170 (197)
...+..+.|+ |... .++++-.+..-.+.++... . ...+..- .+. ...-.+..|.+.|+++++
T Consensus 97 ---gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~--~-h~~Lp~d~d~dln~sas~~~fdr~g~yIit 170 (405)
T KOG1273|consen 97 ---GSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDP--K-HSVLPKDDDGDLNSSASHGVFDRRGKYIIT 170 (405)
T ss_pred ---CCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCC--c-eeeccCCCccccccccccccccCCCCEEEE
Confidence 1122333332 1000 0011111211222222100 0 0000000 000 011123458888999999
Q ss_pred EeCCCcEEEEEcCCCcch
Q psy13207 171 SGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 171 ~~~dg~i~iw~~~~~~~~ 188 (197)
|..-|.+.++|..+.+.+
T Consensus 171 GtsKGkllv~~a~t~e~v 188 (405)
T KOG1273|consen 171 GTSKGKLLVYDAETLECV 188 (405)
T ss_pred ecCcceEEEEecchheee
Confidence 999999999999886543
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-13 Score=101.76 Aligned_cols=141 Identities=19% Similarity=0.311 Sum_probs=95.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE-----eeE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE-----AHS 100 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 100 (197)
..|+|++|-|.. ...++.+-.+|.+.++|..-...... .+-...+++..++....... +..
T Consensus 220 tsvT~ikWvpg~-~~~Fl~a~~sGnlyly~~~~~~~~t~-------------p~~~~~k~~~~f~i~t~ksk~~rNPv~~ 285 (636)
T KOG2394|consen 220 SSVTCIKWVPGS-DSLFLVAHASGNLYLYDKEIVCGATA-------------PSYQALKDGDQFAILTSKSKKTRNPVAR 285 (636)
T ss_pred cceEEEEEEeCC-CceEEEEEecCceEEeeccccccCCC-------------CcccccCCCCeeEEeeeeccccCCccce
Confidence 689999999952 45666777899999998742211000 00001112222211100000 111
Q ss_pred ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
.. --...|+..+|+++.-+||+.+.||.+||||..+ .+++..++..-+...|++|||||+||++|+.|.-|.||
T Consensus 286 w~-~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt-----~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVw 359 (636)
T KOG2394|consen 286 WH-IGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDT-----QELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVW 359 (636)
T ss_pred eE-eccccccceeEcCCCceEEEEecCceEEEeeccH-----HHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEE
Confidence 11 1234788999996665669999999999999976 56666777777889999999999999999999999999
Q ss_pred EcCCCc
Q psy13207 181 KLKKKR 186 (197)
Q Consensus 181 ~~~~~~ 186 (197)
.+...+
T Consensus 360 Sf~erR 365 (636)
T KOG2394|consen 360 SFEERR 365 (636)
T ss_pred Eeccce
Confidence 997654
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=9e-13 Score=93.43 Aligned_cols=152 Identities=14% Similarity=0.166 Sum_probs=115.8
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
-..+|+|.+|+++ ++.+|.+.....|.||...... .+...+++.. ...+++++|.|..+.+.++ -++|.
T Consensus 9 ~~~pitchAwn~d--rt~iAv~~~~~evhiy~~~~~~---~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 9 LLEPITCHAWNSD--RTQIAVSPNNHEVHIYSMLGAD---LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT 83 (361)
T ss_pred ccCceeeeeecCC--CceEEeccCCceEEEEEecCCC---CceeceehhhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence 3578999999999 9999999999999999976543 1444555543 7889999999999888776 36666
Q ss_pred ---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 98 ---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 98 ---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
.-.+. .++..++++.|+|..-.|++|+.-..|.||-.+....+ ......-+.+...|.+++|+|++-+|
T Consensus 84 ~~~~~~WkptlvLl-RiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdW-WVsKhikkPirStv~sldWhpnnVLl 161 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLL-RINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDW-WVSKHIKKPIRSTVTSLDWHPNNVLL 161 (361)
T ss_pred cCCCCeeccceeEE-EeccceeeEeecCcCceEEeccCccEEEEEEEecccce-ehhhhhCCccccceeeeeccCCccee
Confidence 22333 57889999999943333399999999999887653222 11112233467789999999999999
Q ss_pred EEEeCCCcEEEEEc
Q psy13207 169 ASSGDDGCVRLWKL 182 (197)
Q Consensus 169 ~~~~~dg~i~iw~~ 182 (197)
++||.|+.+++|..
T Consensus 162 aaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSA 175 (361)
T ss_pred cccccCcceeEEEE
Confidence 99999999999965
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.7e-12 Score=92.80 Aligned_cols=169 Identities=7% Similarity=0.084 Sum_probs=110.5
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCC-cEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADG-LVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.++.++.|++.. .+. +...+.++.|+|+ +..+++++.++ .+.+||..+.+..... .......++.
T Consensus 93 ~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~d~~~~~~~~~~------~~~~~~~~~~ 163 (300)
T TIGR03866 93 DDNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPD--GKIVVNTSETTNMAHFIDTKTYEIVDNV------LVDQRPRFAE 163 (300)
T ss_pred CCCeEEEEECCCCeEEeEee-CCCCcceEEECCC--CCEEEEEecCCCeEEEEeCCCCeEEEEE------EcCCCccEEE
Confidence 356788887653 122 2234688999998 99998888775 4667798765433211 1233457799
Q ss_pred EccCCCcccc------eeEEEEe------eEecccC-----CC--ceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCccc
Q psy13207 82 WNHSFSRFNS------ISIMYEA------HSINAEH-----KD--LIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 82 ~~~~~~~~~~------~~~~~~~------~~~~~~~-----~~--~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
|+|++..++. .+.+||+ ..+. .+ .. ....++|+++. ..+++.+.++.+.+||.++
T Consensus 164 ~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~---- 238 (300)
T TIGR03866 164 FTADGKELWVSSEIGGTVSVIDVATRKVIKKIT-FEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT---- 238 (300)
T ss_pred ECCCCCEEEEEcCCCCEEEEEEcCcceeeeeee-ecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC----
Confidence 9999987632 2789992 2221 11 11 23457788332 2224555677899999976
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCcchhhhh
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASS-GDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+....+. +...+.+++|+|+|++|+++ +.+|.|.+||+++++.+..++
T Consensus 239 -~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~ 288 (300)
T TIGR03866 239 -YEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK 288 (300)
T ss_pred -CcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 33333332 34478899999999999886 468999999999887655553
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.6e-14 Score=103.86 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=116.4
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEEE-----e
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE-----A 98 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~ 98 (197)
-..+.++.+ |..|+.|+.-|+|-.+|..+++...++.+ ...|..+.|-.+..++|.+ +.+|| +
T Consensus 132 PY~~~ytrn--GrhlllgGrKGHlAa~Dw~t~~L~~Ei~v------~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtEl 203 (545)
T KOG1272|consen 132 PYHLDYTRN--GRHLLLGGRKGHLAAFDWVTKKLHFEINV------METVRDVTFLHNEQFFAVAQKKYVYVYDNNGTEL 203 (545)
T ss_pred CeeeeecCC--ccEEEecCCccceeeeecccceeeeeeeh------hhhhhhhhhhcchHHHHhhhhceEEEecCCCcEE
Confidence 455777777 99999999999999999998865544443 4578889999999999887 78888 6
Q ss_pred eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc-------------------------------------c
Q psy13207 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR-------------------------------------F 141 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~-------------------------------------~ 141 (197)
+.+. ....+..+.|.|..++|++++..|.++--|+.++.- .
T Consensus 204 HClk--~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ 281 (545)
T KOG1272|consen 204 HCLK--RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN 281 (545)
T ss_pred eehh--hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCC
Confidence 6665 345677777777777778888888887777653100 0
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
..+++..+-.|.++|.++++.|+|+|++|++.|..++|||+++..+..
T Consensus 282 skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~ 329 (545)
T KOG1272|consen 282 SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLH 329 (545)
T ss_pred CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccc
Confidence 123333445789999999999999999999999999999999876543
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-13 Score=105.53 Aligned_cols=135 Identities=21% Similarity=0.301 Sum_probs=104.6
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
.+.+|.+.|+++.|+|-. ..+|||||.|..|+||.+..+-.. .+ ....+.+
T Consensus 74 ~l~~H~d~VtDl~FspF~-D~LLAT~S~D~~VKiW~lp~g~~q---~L--------Sape~~~----------------- 124 (1012)
T KOG1445|consen 74 ILAAHGDQVTDLGFSPFA-DELLATCSRDEPVKIWKLPRGHSQ---KL--------SAPEIDV----------------- 124 (1012)
T ss_pred eeecccceeeccCccccc-hhhhhcccCCCeeEEEecCCCccc---cc--------CCcceee-----------------
Confidence 477999999999999963 568999999999999999743211 00 0011111
Q ss_pred EecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 100 SINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
. +..-.+.++.|+ .+.+ +..+..|.+++||+.+ .+.+.++.+|...|.+..|+.||.+|++++.|..|
T Consensus 125 --g-~~~~~vE~l~fHpTaDgi--l~s~a~g~v~i~D~st-----qk~~~el~~h~d~vQSa~WseDG~llatscKdkqi 194 (1012)
T KOG1445|consen 125 --G-GGNVIVECLRFHPTADGI--LASGAHGSVYITDIST-----QKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQI 194 (1012)
T ss_pred --c-CCceEEEEeecccCcCce--EEeccCceEEEEEccc-----CceeecccCCchhhhccccccCCceEeeecCCcce
Confidence 1 223456788888 5667 7778899999999987 78888999999999999999999999999999999
Q ss_pred EEEEcCCCcc-hhhhhh
Q psy13207 178 RLWKLKKKRK-KKKEEE 193 (197)
Q Consensus 178 ~iw~~~~~~~-~~~~~~ 193 (197)
+|||.+.... ++..+.
T Consensus 195 rifDPRa~~~piQ~te~ 211 (1012)
T KOG1445|consen 195 RIFDPRASMEPIQTTEG 211 (1012)
T ss_pred EEeCCccCCCccccccc
Confidence 9999987543 444433
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.1e-13 Score=102.40 Aligned_cols=157 Identities=15% Similarity=0.128 Sum_probs=102.5
Q ss_pred eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc-------------------------ceeccce--
Q psy13207 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS-------------------------QWCLQHE-- 70 (197)
Q Consensus 18 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~-------------------------~~~~~~~-- 70 (197)
..++++|.+.|+|++|+.+ |+.+|||+.|..|.+|+.+-...++ .+.+.+.
T Consensus 46 lqtLKgHKDtVycVAys~d--GkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~q 123 (1081)
T KOG1538|consen 46 LQPLKGHKDTVYCVAYAKD--GKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQ 123 (1081)
T ss_pred ccccccccceEEEEEEccC--CceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhh
Confidence 3578999999999999999 9999999999999999975332110 0000000
Q ss_pred -----eccCCCeeeEEEccCCCcccce-----e---------------------EEEE----------------------
Q psy13207 71 -----VACPTLASCLTWNHSFSRFNSI-----S---------------------IMYE---------------------- 97 (197)
Q Consensus 71 -----~~~~~~~~~~~~~~~~~~~~~~-----~---------------------~~~~---------------------- 97 (197)
.....++.+++|..+|.+++.+ | .+|.
T Consensus 124 K~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~q 203 (1081)
T KOG1538|consen 124 KSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQ 203 (1081)
T ss_pred hhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccc
Confidence 0013456677777777776544 1 1222
Q ss_pred ---eeEecc-------cCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC
Q psy13207 98 ---AHSINA-------EHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG 165 (197)
Q Consensus 98 ---~~~~~~-------~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 165 (197)
...+.. ..+-...|+.+. +.++ +.|+.|+.+.+|..+ +..+.++.....+|+.++..|++
T Consensus 204 TLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~--LiGGsdk~L~~fTR~------GvrLGTvg~~D~WIWtV~~~PNs 275 (1081)
T KOG1538|consen 204 TLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYI--LLGGSDKQLSLFTRD------GVRLGTVGEQDSWIWTVQAKPNS 275 (1081)
T ss_pred eeEEEEecceeecccccCCCCchhheeccCCcEE--EEccCCCceEEEeec------CeEEeeccccceeEEEEEEccCC
Confidence 111110 001112334443 3444 777778877777654 45555555567899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCC
Q psy13207 166 TIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 166 ~~l~~~~~dg~i~iw~~~~ 184 (197)
++.+.|+.||+|-.|++-.
T Consensus 276 Q~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 276 QYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred ceEEEEEccCeeehhhhHH
Confidence 9999999999999998754
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.8e-13 Score=99.94 Aligned_cols=170 Identities=11% Similarity=0.169 Sum_probs=116.7
Q ss_pred cccccccceeeeeee---------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 6 LQSEKCLNQWTRRSN---------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~---------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
...|+.+++|..... +.+. .-.|+..... ..++++|+..+.|+|||++.....+..+ .+...
T Consensus 53 ~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~--S~y~~sgG~~~~Vkiwdl~~kl~hr~lk-----dh~st 123 (673)
T KOG4378|consen 53 MAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQ--SLYEISGGQSGCVKIWDLRAKLIHRFLK-----DHQST 123 (673)
T ss_pred cCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhc--ceeeeccCcCceeeehhhHHHHHhhhcc-----CCcce
Confidence 345566666665432 1222 3344444443 5689999999999999998543221111 12568
Q ss_pred eeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCccccee
Q psy13207 77 ASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
|+++.++....++|+. |.+.. ...+.-+....++-+.|+ ....+|.+++.+|.|.+||+.. ..
T Consensus 124 vt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g-----~s 198 (673)
T KOG4378|consen 124 VTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQG-----MS 198 (673)
T ss_pred eEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccC-----CC
Confidence 9999999998888765 44444 122221234567789999 5555669999999999999965 33
Q ss_pred ee-eeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 145 TI-GNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 145 ~~-~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
+. .-...|..+...++|+| +..+|++.+.|..|.+||.+......
T Consensus 199 p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~ 245 (673)
T KOG4378|consen 199 PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD 245 (673)
T ss_pred cccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence 33 34567999999999999 56788999999999999998765443
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=95.54 Aligned_cols=127 Identities=12% Similarity=0.129 Sum_probs=98.1
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (197)
+.+|.+.|+++.|+.+ +++|++|+.|.++++|++......+. +.+|. .
T Consensus 52 ~~~H~GCiNAlqFS~N--~~~L~SGGDD~~~~~W~~de~~~~k~---------~KPI~---------------------~ 99 (609)
T KOG4227|consen 52 VREHTGCINALQFSHN--DRFLASGGDDMHGRVWNVDELMVRKT---------PKPIG---------------------V 99 (609)
T ss_pred hhhhccccceeeeccC--CeEEeecCCcceeeeechHHHHhhcC---------CCCce---------------------e
Confidence 5689999999999998 99999999999999999865321111 01111 1
Q ss_pred ecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec--CceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 101 INAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE--DHYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
....|.+.|.+++|+ ...+ .+|..+++|.+.|+++ .+.+..+. ...+.|+.+..+|..+.|++.+.++.
T Consensus 100 ~~~~H~SNIF~L~F~~~N~~~--~SG~~~~~VI~HDiEt-----~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~ 172 (609)
T KOG4227|consen 100 MEHPHRSNIFSLEFDLENRFL--YSGERWGTVIKHDIET-----KQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKL 172 (609)
T ss_pred ccCccccceEEEEEccCCeeE--ecCCCcceeEeeeccc-----ceeeeeecccCcccceeecccCCCCceEEEEecCce
Confidence 111577999999999 4555 8999999999999987 34443332 23458999999999999999999999
Q ss_pred EEEEEcCCCc
Q psy13207 177 VRLWKLKKKR 186 (197)
Q Consensus 177 i~iw~~~~~~ 186 (197)
|.+||.+...
T Consensus 173 V~~~D~Rd~~ 182 (609)
T KOG4227|consen 173 VSFIDNRDRQ 182 (609)
T ss_pred EEEEeccCCC
Confidence 9999998654
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-12 Score=93.18 Aligned_cols=133 Identities=17% Similarity=0.193 Sum_probs=79.6
Q ss_pred cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC-CCc-c-----cceeEEEEeeEecccCCCceeE-
Q psy13207 40 LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS-FSR-F-----NSISIMYEAHSINAEHKDLIHD- 111 (197)
Q Consensus 40 ~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~~~~~~~~~~~i~~- 111 (197)
..+|++...|.|+|||..+++.+..++.. +..+..+.|... +.. + ...+++||++... ....+.-
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~-----~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~--e~a~~~~~ 113 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGP-----PATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQA--ESARISWT 113 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCC-----CCcccceEEecCCCCCeeEEeccCCeEEEEEeecch--hhhheecc
Confidence 56888889999999999998766555422 223334444432 111 1 1126777755543 1111111
Q ss_pred -------EEEc----CCCeEEEEeeC----CCeEEEEEccCCcccceeeeee-ecCceecEEEEEEcc-CCCEEEEEeCC
Q psy13207 112 -------VAYD----YYGLRMATCSS----DQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWNI-TGTIVASSGDD 174 (197)
Q Consensus 112 -------~~~~----~~~~~~~s~~~----d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p-~~~~l~~~~~d 174 (197)
++|. .+.+ ++|.. +-.|.+||+|.. .+.+.. ...|...|+++.|+| +.++|++||.|
T Consensus 114 ~~~~~~f~~ld~nck~~ii--~~GtE~~~s~A~v~lwDvR~~----qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvD 187 (376)
T KOG1188|consen 114 QQSGTPFICLDLNCKKNII--ACGTELTRSDASVVLWDVRSE----QQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVD 187 (376)
T ss_pred CCCCCcceEeeccCcCCeE--EeccccccCceEEEEEEeccc----cchhhhhhhhccCcceeEEecCCCCCeEEeeccc
Confidence 1111 1112 33321 345667777652 222322 357999999999999 57899999999
Q ss_pred CcEEEEEcCCC
Q psy13207 175 GCVRLWKLKKK 185 (197)
Q Consensus 175 g~i~iw~~~~~ 185 (197)
|.|.+||++..
T Consensus 188 GLvnlfD~~~d 198 (376)
T KOG1188|consen 188 GLVNLFDTKKD 198 (376)
T ss_pred ceEEeeecCCC
Confidence 99999999765
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.8e-11 Score=90.44 Aligned_cols=168 Identities=23% Similarity=0.370 Sum_probs=124.1
Q ss_pred ccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeC-CCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 7 QSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAA-DGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 7 ~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
..++.++.|+.. ..+..|...|.++.|+|+ +..+++++. |+.+++|++.....+..+.. +...+.+
T Consensus 131 ~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~ 203 (466)
T COG2319 131 SLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPD--GKLLASGSSLDGTIKLWDLRTGKPLSTLAG-----HTDPVSS 203 (466)
T ss_pred CCCccEEEEEecCCCeEEEEEecCcccEEEEEECCC--CCEEEecCCCCCceEEEEcCCCceEEeecc-----CCCceEE
Confidence 346788888765 347789999999999998 878888885 99999999987443322221 3678999
Q ss_pred EEEccCCC-cccc-----eeEEEE------ee-EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFS-RFNS-----ISIMYE------AH-SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~-~~~~-----~~~~~~------~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
++|+|++. .+++ .+.+|+ +. .+. .|.... ...|+++.-.+++++.|+.+++|+.+.... .+
T Consensus 204 ~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~ 277 (466)
T COG2319 204 LAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLS-GHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS----LL 277 (466)
T ss_pred EEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecC-CCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc----EE
Confidence 99999987 3333 267887 22 355 666664 336773333337899999999999976321 23
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
..+.+|...+.++.|+|++..+++++.|+.+.+|+......
T Consensus 278 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 318 (466)
T COG2319 278 RTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKL 318 (466)
T ss_pred EEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCce
Confidence 33367888999999999888888899999999998877654
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.5e-12 Score=99.36 Aligned_cols=173 Identities=14% Similarity=0.169 Sum_probs=122.0
Q ss_pred cccccccceeeeeee-----------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---
Q psy13207 6 LQSEKCLNQWTRRSN-----------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV--- 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~-----------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~--- 71 (197)
|..+|+|-+|++... ...|..+|..+.|..+..+..|++++.||.|..|+++.........+....
T Consensus 261 G~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~ 340 (555)
T KOG1587|consen 261 GCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHK 340 (555)
T ss_pred eccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhccccccccc
Confidence 567889999987642 236899999999987643566999999999999988754432221111111
Q ss_pred ----ccCCCeeeEEEccCCCc-ccce---eEEEE----------------eeEecccCCCceeEEEEc---CCCeEEEEe
Q psy13207 72 ----ACPTLASCLTWNHSFSR-FNSI---SIMYE----------------AHSINAEHKDLIHDVAYD---YYGLRMATC 124 (197)
Q Consensus 72 ----~~~~~~~~~~~~~~~~~-~~~~---~~~~~----------------~~~~~~~~~~~i~~~~~~---~~~~~~~s~ 124 (197)
.....+++++|.+.... +..+ ..++. ...+. .|...|+++.++ +..+ +++
T Consensus 341 ~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~-~h~g~v~~v~~nPF~~k~f--ls~ 417 (555)
T KOG1587|consen 341 GQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFI-THIGPVYAVSRNPFYPKNF--LSV 417 (555)
T ss_pred ccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccc-ccCcceEeeecCCCcccee--eee
Confidence 12456789999886644 3322 12222 12333 678899999999 3333 555
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+ |.++++|.... ...++..+..+...|++++|||. ...|+++..||.+.+||+....
T Consensus 418 g-DW~vriWs~~~----~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~ 475 (555)
T KOG1587|consen 418 G-DWTVRIWSEDV----IASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD 475 (555)
T ss_pred c-cceeEeccccC----CCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc
Confidence 5 99999999862 15677777788888999999996 4688888899999999997643
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.1e-11 Score=84.59 Aligned_cols=160 Identities=16% Similarity=0.198 Sum_probs=107.6
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-cccccceeccceeccCCCeeeEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-VMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
....+-+|+-.. ++ ...++|.++.+.++ .++..- .+.|.+|...+ .+.+..+. +...+....+++
T Consensus 73 ~pNkviIWDD~k~~~i~el-~f~~~I~~V~l~r~----riVvvl-~~~I~VytF~~n~k~l~~~e---t~~NPkGlC~~~ 143 (346)
T KOG2111|consen 73 PPNKVIIWDDLKERCIIEL-SFNSEIKAVKLRRD----RIVVVL-ENKIYVYTFPDNPKLLHVIE---TRSNPKGLCSLC 143 (346)
T ss_pred CCceEEEEecccCcEEEEE-EeccceeeEEEcCC----eEEEEe-cCeEEEEEcCCChhheeeee---cccCCCceEeec
Confidence 334566776322 12 35678999999876 555554 57999999874 33333222 222123333322
Q ss_pred EccCCCccc------ceeEEEE-----e---eEecccCCCceeEEEEc--CCCeEEEEeeCCCe-EEEEEccCCccccee
Q psy13207 82 WNHSFSRFN------SISIMYE-----A---HSINAEHKDLIHDVAYD--YYGLRMATCSSDQN-IKVTRDVMGTRFDIE 144 (197)
Q Consensus 82 ~~~~~~~~~------~~~~~~~-----~---~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~-i~~~d~~~~~~~~~~ 144 (197)
-..+...|+ ..+++-+ . ..++ +|...|.|++.+ +..+ ||++..|+ ||+||..+ +.
T Consensus 144 ~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~-AH~s~Iacv~Ln~~Gt~v--ATaStkGTLIRIFdt~~-----g~ 215 (346)
T KOG2111|consen 144 PTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIIN-AHDSDIACVALNLQGTLV--ATASTKGTLIRIFDTED-----GT 215 (346)
T ss_pred CCCCceEEEcCCCccceEEEEEhhhcCcCCceEEE-cccCceeEEEEcCCccEE--EEeccCcEEEEEEEcCC-----Cc
Confidence 222222222 1255555 2 3455 899999999999 6666 99999986 59999987 67
Q ss_pred eeeeecCc--eecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 145 TIGNFEDH--YCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 145 ~~~~~~~h--~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+.+++.- ...|++++|||+..+|+++|.-|+++||.++.
T Consensus 216 ~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 216 LLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 77776543 45799999999999999999999999999875
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.9e-12 Score=94.26 Aligned_cols=119 Identities=13% Similarity=0.207 Sum_probs=92.6
Q ss_pred CCCeeeEEEccCCC-cccce-----eEEEE---------------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeE
Q psy13207 74 PTLASCLTWNHSFS-RFNSI-----SIMYE---------------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNI 130 (197)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~-----~~~~~---------------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i 130 (197)
..++.++.|.+... .++++ +++|. +..+. .|...|+++.|+ ++.+ ++|+.+|.|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls-~H~~aVN~vRf~p~gelL--ASg~D~g~v 89 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLS-RHTRAVNVVRFSPDGELL--ASGGDGGEV 89 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeeccc-CCcceeEEEEEcCCcCee--eecCCCceE
Confidence 45677777777665 56555 67787 34455 799999999999 5567 999999999
Q ss_pred EEEEccC------Cc-----ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 131 KVTRDVM------GT-----RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 131 ~~~d~~~------~~-----~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
.+|-... .+ .........+.+|...|+.++|+|++.++++++.|.++++||+..+.....+.+++
T Consensus 90 ~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~ 165 (434)
T KOG1009|consen 90 FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHE 165 (434)
T ss_pred EEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccc
Confidence 9997651 01 12244556778899999999999999999999999999999999987776665553
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=4e-12 Score=101.92 Aligned_cols=131 Identities=17% Similarity=0.318 Sum_probs=108.2
Q ss_pred cccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc
Q psy13207 10 KCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 10 ~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
+++-.|+... .+.+|.+.|..+.|+-+ |.+++++|.|.++++|++.+.+.+. +..|
T Consensus 155 ~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~d--g~~i~s~SdDRsiRlW~i~s~~~~~---------------~~~f-- 215 (967)
T KOG0974|consen 155 GEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLD--GRYIASVSDDRSIRLWPIDSREVLG---------------CTGF-- 215 (967)
T ss_pred ccEEEEeccccCCcceecccCCceEEEEEccC--CcEEEEEecCcceeeeecccccccC---------------cccc--
Confidence 4445565432 37899999999999998 9999999999999999999875432 1111
Q ss_pred CCCcccceeEEEEeeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEcc
Q psy13207 85 SFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNI 163 (197)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p 163 (197)
+|...+..++|+++.+ +|++.|.+.++|+.. ...+..+.+|. ..|+.++..+
T Consensus 216 -------------------gHsaRvw~~~~~~n~i--~t~gedctcrvW~~~------~~~l~~y~~h~g~~iw~~~~~~ 268 (967)
T KOG0974|consen 216 -------------------GHSARVWACCFLPNRI--ITVGEDCTCRVWGVN------GTQLEVYDEHSGKGIWKIAVPI 268 (967)
T ss_pred -------------------cccceeEEEEecccee--EEeccceEEEEEecc------cceehhhhhhhhcceeEEEEcC
Confidence 8999999999998877 999999999999765 45555777775 5689999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+...++|++.|+.+++|++....
T Consensus 269 ~~~~~vT~g~Ds~lk~~~l~~r~ 291 (967)
T KOG0974|consen 269 GVIIKVTGGNDSTLKLWDLNGRG 291 (967)
T ss_pred CceEEEeeccCcchhhhhhhccc
Confidence 99999999999999999987643
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=88.83 Aligned_cols=145 Identities=15% Similarity=0.254 Sum_probs=104.0
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc-ccc----eeEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR-FNS----ISIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~--- 97 (197)
..+..++|++. -..+|++..|..|++|+-.+.. ...++.. ....++|++|.|.+.. ++. +|.+|.
T Consensus 99 ~dlr~~aWhqH--~~~fava~nddvVriy~ksst~-pt~Lks~----sQrnvtclawRPlsaselavgCr~gIciW~~s~ 171 (445)
T KOG2139|consen 99 IDLRGVAWHQH--IIAFAVATNDDVVRIYDKSSTC-PTKLKSV----SQRNVTCLAWRPLSASELAVGCRAGICIWSDSR 171 (445)
T ss_pred cceeeEeechh--hhhhhhhccCcEEEEeccCCCC-Cceecch----hhcceeEEEeccCCcceeeeeecceeEEEEcCc
Confidence 35778999996 6778999999999999977632 2111111 1568999999998765 333 388998
Q ss_pred -----------------eeEecccCCCceeEEEEcCCCeEEEEeeC-CCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 98 -----------------AHSINAEHKDLIHDVAYDYYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 98 -----------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+...+ +| ..|++++|+++...+++++. |..|.+||..++. ..++. .-..+.+.-+
T Consensus 172 tln~~r~~~~~s~~~~qvl~~p-gh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~---~~pL~--~~glgg~slL 244 (445)
T KOG2139|consen 172 TLNANRNIRMMSTHHLQVLQDP-GH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ---KIPLI--PKGLGGFSLL 244 (445)
T ss_pred ccccccccccccccchhheeCC-CC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCC---ccccc--ccCCCceeeE
Confidence 11112 33 67999999955555588875 6789999998732 22222 1224567889
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.|||||.+|.+++.|+..++|+..+
T Consensus 245 kwSPdgd~lfaAt~davfrlw~e~q 269 (445)
T KOG2139|consen 245 KWSPDGDVLFAATCDAVFRLWQENQ 269 (445)
T ss_pred EEcCCCCEEEEecccceeeeehhcc
Confidence 9999999999999999999996654
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.1e-11 Score=81.94 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=104.9
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-c---cceeccceec----cCCCeeeEEEccCCCccc-
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-L---SQWCLQHEVA----CPTLASCLTWNHSFSRFN- 90 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~- 90 (197)
..++|.++|+.+.|..+ +|++|+ ||.|+=|..+.... . +.|.+..... .--.|.++-..|+.+.+.
T Consensus 57 ~eqahdgpiy~~~f~d~----~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~ 131 (325)
T KOG0649|consen 57 PEQAHDGPIYYLAFHDD----FLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILF 131 (325)
T ss_pred eccccCCCeeeeeeehh----heeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEE
Confidence 35789999999999843 677776 59999998765432 1 1122111111 123578888888776543
Q ss_pred -ce---eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec--------
Q psy13207 91 -SI---SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-------- 150 (197)
Q Consensus 91 -~~---~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-------- 150 (197)
.+ +..|| .+.+. +|...+.++.-- ...+ ++|++||++|+||.++ .+.+..+.
T Consensus 132 AgGD~~~y~~dlE~G~i~r~~r-GHtDYvH~vv~R~~~~qi--lsG~EDGtvRvWd~kt-----~k~v~~ie~yk~~~~l 203 (325)
T KOG0649|consen 132 AGGDGVIYQVDLEDGRIQREYR-GHTDYVHSVVGRNANGQI--LSGAEDGTVRVWDTKT-----QKHVSMIEPYKNPNLL 203 (325)
T ss_pred ecCCeEEEEEEecCCEEEEEEc-CCcceeeeeeecccCcce--eecCCCccEEEEeccc-----cceeEEeccccChhhc
Confidence 22 67777 56677 999999999884 5556 7999999999999988 34443332
Q ss_pred -Cc-eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 151 -DH-YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 151 -~h-~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.| ..+|-+++. +...|++|+ ...+.+|+++..+....
T Consensus 204 Rp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~v 242 (325)
T KOG0649|consen 204 RPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCV 242 (325)
T ss_pred CcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEE
Confidence 12 235666665 467787775 56899999998765443
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.1e-11 Score=93.42 Aligned_cols=172 Identities=13% Similarity=0.171 Sum_probs=118.2
Q ss_pred Ccccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC
Q psy13207 5 PLQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
.++.||.+..|.-.. .+.=|...|+++.|+++ |.+|.||+..|.+.+|.+.++++ ++-+ +-..
T Consensus 222 a~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~--G~~LlSGG~E~VLv~Wq~~T~~k--qfLP----RLgs 293 (792)
T KOG1963|consen 222 AGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSD--GAYLLSGGREGVLVLWQLETGKK--QFLP----RLGS 293 (792)
T ss_pred EeccCCcEEEEeccccccccccceEEEecccccceeEEecC--CceEeecccceEEEEEeecCCCc--cccc----ccCC
Confidence 467788899996433 35558899999999999 99999999999999999998762 1111 1156
Q ss_pred CeeeEEEccCCCccccee--------------------------------------------------------------
Q psy13207 76 LASCLTWNHSFSRFNSIS-------------------------------------------------------------- 93 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 93 (197)
++..+.++|++.+.+...
T Consensus 294 ~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~yd 373 (792)
T KOG1963|consen 294 PILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYD 373 (792)
T ss_pred eeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEe
Confidence 677777777776542210
Q ss_pred -----------------------------------------------------------EEEE----------eeEeccc
Q psy13207 94 -----------------------------------------------------------IMYE----------AHSINAE 104 (197)
Q Consensus 94 -----------------------------------------------------------~~~~----------~~~~~~~ 104 (197)
++|. ...+...
T Consensus 374 l~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~P 453 (792)
T KOG1963|consen 374 LYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNP 453 (792)
T ss_pred ccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecC
Confidence 3333 1122226
Q ss_pred CCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcc-----cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 105 HKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTR-----FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 105 ~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
|+..+...++. .+-.++++++.||.+++|-+...++ ....+...-.-|..++..++|+.||..|+ .+.|++|
T Consensus 454 H~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla-~s~~~~I 532 (792)
T KOG1963|consen 454 HGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLA-VSFDDTI 532 (792)
T ss_pred CCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEE-EecCCEE
Confidence 77777777766 2222559999999999998732111 01223332224788999999999997555 5578899
Q ss_pred EEEEcCCC
Q psy13207 178 RLWKLKKK 185 (197)
Q Consensus 178 ~iw~~~~~ 185 (197)
.+||..+.
T Consensus 533 tiwd~~~~ 540 (792)
T KOG1963|consen 533 TIWDYDTK 540 (792)
T ss_pred EEecCCCh
Confidence 99999884
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.4e-11 Score=96.95 Aligned_cols=172 Identities=11% Similarity=0.076 Sum_probs=115.7
Q ss_pred cccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceec-cCCCeeeEEEc
Q psy13207 10 KCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVA-CPTLASCLTWN 83 (197)
Q Consensus 10 ~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~ 83 (197)
...+-|+++. .+..|...|..++.++.+ +.+|+|||.||+|++|+++....- ..+....+.. ...++.++...
T Consensus 1029 ~p~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~-~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1029 SPPPGWNPRGILVAHLHEHSSAVIKLAVSSEH-TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC 1107 (1431)
T ss_pred CCCCCCCccceEeehhhhccccccceeecCCC-CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec
Confidence 3345577664 466789999999998852 689999999999999999754332 2222222333 37788999999
Q ss_pred cCCCcccce-----eEEEEeeEec------------ccCC--CceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 84 HSFSRFNSI-----SIMYEAHSIN------------AEHK--DLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 84 ~~~~~~~~~-----~~~~~~~~~~------------~~~~--~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
+.++.+|.+ +.+.++...+ ..+. ..+..-+|. ..-.+++.+..-+.|..||.+..
T Consensus 1108 ~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~---- 1183 (1431)
T KOG1240|consen 1108 GNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMR---- 1183 (1431)
T ss_pred cCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhh----
Confidence 999988765 4444411110 0111 223333443 11134477888899999999862
Q ss_pred eeeeee--ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 143 IETIGN--FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 143 ~~~~~~--~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
..... .....+.|++++.+|.+++++.|+..|.+.+||++-+..
T Consensus 1184 -~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~ 1229 (1431)
T KOG1240|consen 1184 -HDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVP 1229 (1431)
T ss_pred -hhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCce
Confidence 21111 122346899999999999999999999999999987653
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.1e-11 Score=96.36 Aligned_cols=157 Identities=17% Similarity=0.258 Sum_probs=107.8
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-----ccccceeccc-eecc-CCCeeeEEEccCCCcc-cce----
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-----MNLSQWCLQH-EVAC-PTLASCLTWNHSFSRF-NSI---- 92 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-----~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~~~---- 92 (197)
...|+.+.+-.+.+..++++|+.||.|+||+--.. +.+..|.... .... ...-.-+.|.....+| .+|
T Consensus 1109 ~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~ 1188 (1387)
T KOG1517|consen 1109 DTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRS 1188 (1387)
T ss_pred CCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeE
Confidence 35799999977655788999999999999974322 1222222111 1111 1112456676655554 343
Q ss_pred eEEEE------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceec--EEEEEE
Q psy13207 93 SIMYE------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCT--VWRVSW 161 (197)
Q Consensus 93 ~~~~~------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~--v~~~~~ 161 (197)
+++|| ++.++.+-...++++.-+ ++.+ ++|..||.|++||.+.... ...+...+.|... |..+.+
T Consensus 1189 IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i--~AGfaDGsvRvyD~R~a~~--ds~v~~~R~h~~~~~Iv~~sl 1264 (1387)
T KOG1517|consen 1189 IRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNII--AAGFADGSVRVYDRRMAPP--DSLVCVYREHNDVEPIVHLSL 1264 (1387)
T ss_pred EEEEecccceeEeecccCCCccceeecccccCCceE--EEeecCCceEEeecccCCc--cccceeecccCCcccceeEEe
Confidence 89999 333332334556666655 6777 9999999999999986321 2456677888877 999999
Q ss_pred ccCCC-EEEEEeCCCcEEEEEcCCC
Q psy13207 162 NITGT-IVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 162 ~p~~~-~l~~~~~dg~i~iw~~~~~ 185 (197)
.++|- .|++|+.||.|++||++..
T Consensus 1265 q~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1265 QRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred ecCCCcceeeeccCCeEEEEecccC
Confidence 98663 5999999999999999984
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.6e-10 Score=85.07 Aligned_cols=158 Identities=20% Similarity=0.325 Sum_probs=116.8
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceeccCCCeeeEEE-ccCCC-cccc-----
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVACPTLASCLTW-NHSFS-RFNS----- 91 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~----- 91 (197)
.+..|...+.++.+.+. +..++.++.|+.+.+|+..... ....+.... ...+..+.+ .+++. .+..
T Consensus 60 ~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~d 133 (466)
T COG2319 60 LLRGHEDSITSIAFSPD--GELLLSGSSDGTIKLWDLDNGEKLIKSLEGLH----DSSVSKLALSSPDGNSILLASSSLD 133 (466)
T ss_pred eeeeccceEEEEEECCC--CcEEEEecCCCcEEEEEcCCCceeEEEEeccC----CCceeeEEEECCCcceEEeccCCCC
Confidence 35689999999999998 9999999999999999998775 222222111 124555555 66666 2221
Q ss_pred -eeEEEEe-------eEecccCCCceeEEEEcCCCeEEEEeeC-CCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 92 -ISIMYEA-------HSINAEHKDLIHDVAYDYYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 92 -~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
.+.+|+. ..+. .|...|..++|+++...+++++. |+.+++|+... ...+..+.+|...|.+++|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~ 207 (466)
T COG2319 134 GTVKLWDLSTPGKLIRTLE-GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT-----GKPLSTLAGHTDPVSSLAFS 207 (466)
T ss_pred ccEEEEEecCCCeEEEEEe-cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC-----CceEEeeccCCCceEEEEEc
Confidence 2678873 3455 78999999999944433477775 99999999975 56677778899999999999
Q ss_pred cCCC-EEEEEeCCCcEEEEEcCCCcchh
Q psy13207 163 ITGT-IVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 163 p~~~-~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
|++. ++++++.|+.+++||...+....
T Consensus 208 ~~~~~~~~~~~~d~~i~~wd~~~~~~~~ 235 (466)
T COG2319 208 PDGGLLIASGSSDGTIRLWDLSTGKLLR 235 (466)
T ss_pred CCcceEEEEecCCCcEEEEECCCCcEEe
Confidence 9998 55655899999999887554443
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.6e-11 Score=89.53 Aligned_cols=116 Identities=16% Similarity=0.265 Sum_probs=83.9
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..+||.+++|.... ++.....+|.|++|.|+ .+.++-| ..+++.|=.+.....+-+|+ .++.-|.++.
T Consensus 122 ~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~--S~~vl~c-~g~h~~IKpL~~n~k~i~Wk-----AHDGiiL~~~ 193 (737)
T KOG1524|consen 122 AGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPN--SNSIVFC-QGGHISIKPLAANSKIIRWR-----AHDGLVLSLS 193 (737)
T ss_pred ecCCceEEEEeccchHHHHHhhcCceeEEEEECCC--CCceEEe-cCCeEEEeecccccceeEEe-----ccCcEEEEee
Confidence 46899999998764 45567789999999997 5444333 23577776666554443343 2367789999
Q ss_pred EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEE
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV 132 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~ 132 (197)
|++..+.++++ .++|| +.... .|..+|++++|+|+.+ ...++-+++|+
T Consensus 194 W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~-~~ey~ITSva~npd~~--~~v~S~nt~R~ 251 (737)
T KOG1524|consen 194 WSTQSNIIASGGEDFRFKIWDAQGANLFTSA-AEEYAITSVAFNPEKD--YLLWSYNTARF 251 (737)
T ss_pred cCccccceeecCCceeEEeecccCcccccCC-hhccceeeeeeccccc--eeeeeeeeeee
Confidence 99999999887 69999 55555 7999999999997755 44444445553
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-10 Score=89.05 Aligned_cols=161 Identities=10% Similarity=0.022 Sum_probs=103.2
Q ss_pred ccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCC---CcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 9 EKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAAD---GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 9 ~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..+.+|+.. ..+..|...+....|+|+ |+.|+.++.+ ..|++||+.+++... .... ......++
T Consensus 183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPD--G~~la~~s~~~~~~~i~i~dl~tg~~~~----l~~~--~g~~~~~~ 254 (429)
T PRK01742 183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPD--GSKLAYVSFENKKSQLVVHDLRSGARKV----VASF--RGHNGAPA 254 (429)
T ss_pred eEEEEEECCCCCCceEeccCCCccccceEcCC--CCEEEEEEecCCCcEEEEEeCCCCceEE----EecC--CCccCcee
Confidence 4566777643 246678888999999999 9888887654 369999998764211 1111 22344689
Q ss_pred EccCCCcccce------eEEE--E-----eeEecccCCCceeEEEEcCCCeEEE-EeeCCCeEEEEEccCCcccceeeee
Q psy13207 82 WNHSFSRFNSI------SIMY--E-----AHSINAEHKDLIHDVAYDYYGLRMA-TCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 82 ~~~~~~~~~~~------~~~~--~-----~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
|+|+++.++.+ ..+| + +..+. .+...+....|+++.-.|+ ++..++...+|+++... ....
T Consensus 255 wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt-~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~----~~~~ 329 (429)
T PRK01742 255 FSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLT-SGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG----GGAS 329 (429)
T ss_pred ECCCCCEEEEEEecCCcEEEEEEECCCCCeEeec-cCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC----CCeE
Confidence 99999987653 2444 4 33444 4566678899994432224 44467888888875421 1111
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
.+ .+.. ....|+|||++|+..+.++ +.+||+.++.
T Consensus 330 ~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~ 364 (429)
T PRK01742 330 LV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGS 364 (429)
T ss_pred Ee-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCC
Confidence 12 2322 4578999999998887764 5558887654
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.2e-11 Score=84.52 Aligned_cols=139 Identities=18% Similarity=0.125 Sum_probs=105.3
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMY 96 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 96 (197)
+..+.|.|++|+|.+ ...++.|+...++-|+.-.....+... ..++..|+.+.|.++|+.|.++ |..|
T Consensus 205 gq~giisc~a~sP~~-~~~~a~gsY~q~~giy~~~~~~pl~ll-----ggh~gGvThL~~~edGn~lfsGaRk~dkIl~W 278 (406)
T KOG2919|consen 205 GQKGIISCFAFSPMD-SKTLAVGSYGQRVGIYNDDGRRPLQLL-----GGHGGGVTHLQWCEDGNKLFSGARKDDKILCW 278 (406)
T ss_pred cccceeeeeeccCCC-CcceeeecccceeeeEecCCCCceeee-----cccCCCeeeEEeccCcCeecccccCCCeEEEE
Confidence 346789999999973 568999999999999987665443211 1337899999999999998877 7889
Q ss_pred Eee-------EecccCCCce-eEEEEc----CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 97 EAH-------SINAEHKDLI-HDVAYD----YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 97 ~~~-------~~~~~~~~~i-~~~~~~----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
|++ .+. .|.... ..|-|. ++.+ ++|+.||.|++||++.. +..+..+..|...++.++++|-
T Consensus 279 DiR~~~~pv~~L~-rhv~~TNQRI~FDld~~~~~L--asG~tdG~V~vwdlk~~----gn~~sv~~~~sd~vNgvslnP~ 351 (406)
T KOG2919|consen 279 DIRYSRDPVYALE-RHVGDTNQRILFDLDPKGEIL--ASGDTDGSVRVWDLKDL----GNEVSVTGNYSDTVNGVSLNPI 351 (406)
T ss_pred eehhccchhhhhh-hhccCccceEEEecCCCCcee--eccCCCccEEEEecCCC----CCcccccccccccccceecCcc
Confidence 933 333 454422 345565 5566 99999999999999752 4556677788999999999999
Q ss_pred CCEEEEEeCC
Q psy13207 165 GTIVASSGDD 174 (197)
Q Consensus 165 ~~~l~~~~~d 174 (197)
-.++|+++..
T Consensus 352 mpilatssGq 361 (406)
T KOG2919|consen 352 MPILATSSGQ 361 (406)
T ss_pred cceeeeccCc
Confidence 8888887754
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-10 Score=84.32 Aligned_cols=153 Identities=14% Similarity=0.201 Sum_probs=111.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCC--CcEEEEEcCCcccccceeccce----e--ccCCCeeeEEEccC--CCcccce---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAAD--GLVRIYEAPDVMNLSQWCLQHE----V--ACPTLASCLTWNHS--FSRFNSI--- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~d--g~v~iw~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~--~~~~~~~--- 92 (197)
..+..+.-.|. ...++++|+.. ..++|||+...+.+ |.-... + +-+--++.+.|-+. ...|+++
T Consensus 149 ~g~~~~r~~~~-~p~Iva~GGke~~n~lkiwdle~~~qi--w~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~ 225 (412)
T KOG3881|consen 149 PGLYDVRQTDT-DPYIVATGGKENINELKIWDLEQSKQI--WSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRY 225 (412)
T ss_pred CceeeeccCCC-CCceEecCchhcccceeeeecccceee--eeccCCCCccccceeeeeeccceecCCCCCceEEEEecc
Confidence 34556666664 24677889998 89999999876432 321111 1 11334678888887 5666665
Q ss_pred --eEEEE-------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecEEEEE
Q psy13207 93 --SIMYE-------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVS 160 (197)
Q Consensus 93 --~~~~~-------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~ 160 (197)
+++|| +..+. -....+.++... ++.+ ++|..-+.+..||.+. ...... +.+-.+.|.++.
T Consensus 226 hqvR~YDt~~qRRPV~~fd-~~E~~is~~~l~p~gn~I--y~gn~~g~l~~FD~r~-----~kl~g~~~kg~tGsirsih 297 (412)
T KOG3881|consen 226 HQVRLYDTRHQRRPVAQFD-FLENPISSTGLTPSGNFI--YTGNTKGQLAKFDLRG-----GKLLGCGLKGITGSIRSIH 297 (412)
T ss_pred eeEEEecCcccCcceeEec-cccCcceeeeecCCCcEE--EEecccchhheecccC-----ceeeccccCCccCCcceEE
Confidence 78898 44554 445667777665 6666 9999999999999986 444444 778889999999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
.+|.++++|+++.|..++|+|+++.+.+.
T Consensus 298 ~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 298 CHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred EcCCCceEEeeccceeEEEeecccchhhh
Confidence 99999999999999999999999865443
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.3e-10 Score=81.97 Aligned_cols=150 Identities=11% Similarity=0.246 Sum_probs=102.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCC--CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc--ccceeEEEE-----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAAD--GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR--FNSISIMYE----- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~d--g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----- 97 (197)
.|--+-|+.. ++|..+.+ +.+++.+++....+.++.. ...|.++.++.+.-. |...+.|||
T Consensus 48 ~IvEmLFSSS----LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~f------pt~IL~VrmNr~RLvV~Lee~IyIydI~~Mk 117 (391)
T KOG2110|consen 48 SIVEMLFSSS----LVAIVSIKQPRKLKVVHFKKKTTICEIFF------PTSILAVRMNRKRLVVCLEESIYIYDIKDMK 117 (391)
T ss_pred EEEEeecccc----eeEEEecCCCceEEEEEcccCceEEEEec------CCceEEEEEccceEEEEEcccEEEEecccce
Confidence 3445555554 55544433 4588888877655544332 456777777665533 233489999
Q ss_pred -eeEecc--cCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 98 -AHSINA--EHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 -~~~~~~--~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
++++.. .+...+.++..+ ..++.+-....-|.|.+||..+ .+.+..+.+|++.+.+++|+|+|.+|||+|
T Consensus 118 lLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n-----l~~v~~I~aH~~~lAalafs~~G~llATAS 192 (391)
T KOG2110|consen 118 LLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN-----LQPVNTINAHKGPLAALAFSPDGTLLATAS 192 (391)
T ss_pred eehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccc-----ceeeeEEEecCCceeEEEECCCCCEEEEec
Confidence 333321 345556666666 3344222333469999999976 678888899999999999999999999999
Q ss_pred CCCc-EEEEEcCCCcchhhh
Q psy13207 173 DDGC-VRLWKLKKKRKKKKE 191 (197)
Q Consensus 173 ~dg~-i~iw~~~~~~~~~~~ 191 (197)
..|+ ||++.+.+++++.++
T Consensus 193 eKGTVIRVf~v~~G~kl~eF 212 (391)
T KOG2110|consen 193 EKGTVIRVFSVPEGQKLYEF 212 (391)
T ss_pred cCceEEEEEEcCCccEeeee
Confidence 9888 799999888776554
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.6e-11 Score=94.47 Aligned_cols=166 Identities=16% Similarity=0.176 Sum_probs=108.7
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC-CcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP-DVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+.++.|.+.. .|.+|+++|++++|+|. . +.+.||++++||.+ ..... ......+..+.-+.+
T Consensus 250 aS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~--~----sss~dgt~~~wd~r~~~~~y--~prp~~~~~~~~~~s 321 (1113)
T KOG0644|consen 250 ASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPR--A----SSSDDGTCRIWDARLEPRIY--VPRPLKFTEKDLVDS 321 (1113)
T ss_pred cccCceEEEEecCCCchHHHHhccccceeeeccCcc--c----cCCCCCceEecccccccccc--CCCCCCcccccceee
Confidence 45677899999875 47899999999999997 3 77899999999988 21100 000000000111222
Q ss_pred EEEccCCCcccc-------------------------------------e-----eEEEE------eeEecccCCCceeE
Q psy13207 80 LTWNHSFSRFNS-------------------------------------I-----SIMYE------AHSINAEHKDLIHD 111 (197)
Q Consensus 80 ~~~~~~~~~~~~-------------------------------------~-----~~~~~------~~~~~~~~~~~i~~ 111 (197)
+-|...+..+++ + +.+|+ ++.+. +|...+..
T Consensus 322 ~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~-ghsd~~yv 400 (1113)
T KOG0644|consen 322 ILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLM-GHSDEVYV 400 (1113)
T ss_pred eeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhc-ccccceee
Confidence 222221111111 1 25555 44445 78889999
Q ss_pred EEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 112 VAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 112 ~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+.++ +... .+++.||...|||+-. +.+++.+.-....+...+||++|+.++....-|.++|...-.++.
T Consensus 401 Ld~Hpfn~ri~--msag~dgst~iwdi~e-----g~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s 472 (1113)
T KOG0644|consen 401 LDVHPFNPRIA--MSAGYDGSTIIWDIWE-----GIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKS 472 (1113)
T ss_pred eeecCCCcHhh--hhccCCCceEeeeccc-----CCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCcc
Confidence 9998 5555 8899999999999944 444443322245677899999999999888889999987755443
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.2e-11 Score=60.45 Aligned_cols=39 Identities=21% Similarity=0.463 Sum_probs=37.0
Q ss_pred eeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEE
Q psy13207 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55 (197)
Q Consensus 15 w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~ 55 (197)
|++..++.+|.++|++++|+|+ +.+|++++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~--~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPD--GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETT--SSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecc--cccceeeCCCCEEEEEC
Confidence 6778899999999999999998 99999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.9e-11 Score=91.37 Aligned_cols=139 Identities=19% Similarity=0.316 Sum_probs=103.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---e
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE---A 98 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~ 98 (197)
.|..++|.|+ |..|+.+. +..+.+||.+.+..+.+.+- ++..|.|++|+.+|+.++++ +.+|. .
T Consensus 14 ci~d~afkPD--GsqL~lAA-g~rlliyD~ndG~llqtLKg-----HKDtVycVAys~dGkrFASG~aDK~VI~W~~klE 85 (1081)
T KOG1538|consen 14 CINDIAFKPD--GTQLILAA-GSRLLVYDTSDGTLLQPLKG-----HKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE 85 (1081)
T ss_pred chheeEECCC--CceEEEec-CCEEEEEeCCCccccccccc-----ccceEEEEEEccCCceeccCCCceeEEEeccccc
Confidence 7999999999 76666554 45899999999876544331 26789999999999999887 68898 2
Q ss_pred eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 99 HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
..+.=.|+..|.|+.|+ .+.+ ++|+-. ..-+|.... +.+...+ ....|.+++|..||++|+.|-.||+
T Consensus 86 G~LkYSH~D~IQCMsFNP~~h~L--asCsLs-dFglWS~~q------K~V~K~k-ss~R~~~CsWtnDGqylalG~~nGT 155 (1081)
T KOG1538|consen 86 GILKYSHNDAIQCMSFNPITHQL--ASCSLS-DFGLWSPEQ------KSVSKHK-SSSRIICCSWTNDGQYLALGMFNGT 155 (1081)
T ss_pred ceeeeccCCeeeEeecCchHHHh--hhcchh-hccccChhh------hhHHhhh-hheeEEEeeecCCCcEEEEeccCce
Confidence 22222599999999999 5556 777643 345787653 2222221 2457899999999999999999999
Q ss_pred EEEEEcC
Q psy13207 177 VRLWKLK 183 (197)
Q Consensus 177 i~iw~~~ 183 (197)
|.+-+-.
T Consensus 156 IsiRNk~ 162 (1081)
T KOG1538|consen 156 ISIRNKN 162 (1081)
T ss_pred EEeecCC
Confidence 9998643
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.4e-10 Score=90.67 Aligned_cols=168 Identities=18% Similarity=0.241 Sum_probs=109.6
Q ss_pred cccccccceeeeeee-------------ec----CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc
Q psy13207 6 LQSEKCLNQWTRRSN-------------LV----DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~-------------~~----~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~ 68 (197)
+..||.+|+|+--.. +. +..+.-.-++|... ..+|.+++.-..|+|||+............
T Consensus 1129 as~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~--~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~ 1206 (1387)
T KOG1517|consen 1129 ASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQ--SGHLLVTGDVRSIRIWDAHKEQVVADIPYG 1206 (1387)
T ss_pred eccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhh--CCeEEecCCeeEEEEEecccceeEeecccC
Confidence 357889999974322 11 22222245677775 334555555789999999876544322221
Q ss_pred ceeccCCCeeeEEEccC-CCcccce-----eEEEE---------eeEecccCCCc--eeEEEEcCCCe-EEEEeeCCCeE
Q psy13207 69 HEVACPTLASCLTWNHS-FSRFNSI-----SIMYE---------AHSINAEHKDL--IHDVAYDYYGL-RMATCSSDQNI 130 (197)
Q Consensus 69 ~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~---------~~~~~~~~~~~--i~~~~~~~~~~-~~~s~~~d~~i 130 (197)
....++++.-+.. |+.+++| +++|| +.... .|+.. |..+.+..+.+ .|++|+.||.|
T Consensus 1207 ----s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R-~h~~~~~Iv~~slq~~G~~elvSgs~~G~I 1281 (1387)
T KOG1517|consen 1207 ----SSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYR-EHNDVEPIVHLSLQRQGLGELVSGSQDGDI 1281 (1387)
T ss_pred ----CCccceeecccccCCceEEEeecCCceEEeecccCCccccceeec-ccCCcccceeEEeecCCCcceeeeccCCeE
Confidence 1445666554433 4666555 79999 44455 67776 88888883222 24999999999
Q ss_pred EEEEccCCcccceeeeeeecCce---ecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 131 KVTRDVMGTRFDIETIGNFEDHY---CTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
++||++... .+.......|. +..+++..++....+|+|+. +.|.||++..
T Consensus 1282 ~~~DlR~~~---~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G 1334 (1387)
T KOG1517|consen 1282 QLLDLRMSS---KETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG 1334 (1387)
T ss_pred EEEecccCc---ccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh
Confidence 999998631 11122222232 35899999999999999998 9999999864
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=91.12 Aligned_cols=126 Identities=22% Similarity=0.238 Sum_probs=90.8
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-cccccceeccceeccCCCeeeEEEccCCCcccceeE
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-VMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISI 94 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (197)
+....+..|.++|+++.++|- +..++..+.|-+++||.... ...+-
T Consensus 389 ~~~~~~~~h~g~v~~v~~nPF--~~k~fls~gDW~vriWs~~~~~~Pl~------------------------------- 435 (555)
T KOG1587|consen 389 KGHSTFITHIGPVYAVSRNPF--YPKNFLSVGDWTVRIWSEDVIASPLL------------------------------- 435 (555)
T ss_pred cccccccccCcceEeeecCCC--ccceeeeeccceeEeccccCCCCcch-------------------------------
Confidence 334456678999999999998 65554444499999999763 22211
Q ss_pred EEEeeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 95 MYEAHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 95 ~~~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
.+. .+...+++++|+ .+--+|+++..||.+.+||+... ...++....-+....+.+.|+++|+.|++|..
T Consensus 436 -----~~~-~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~---~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~ 506 (555)
T KOG1587|consen 436 -----SLD-SSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD---DEEPVLSQKVCSPALTRVRWSPNGKLLAVGDA 506 (555)
T ss_pred -----hhh-hccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc---ccCCcccccccccccceeecCCCCcEEEEecC
Confidence 111 455568888888 22233399999999999999652 23444444444566788899999999999999
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
.|++.+|++.
T Consensus 507 ~G~~~~~~l~ 516 (555)
T KOG1587|consen 507 NGTTHILKLS 516 (555)
T ss_pred CCcEEEEEcC
Confidence 9999999995
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.7e-10 Score=81.61 Aligned_cols=149 Identities=11% Similarity=0.147 Sum_probs=104.2
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCL 80 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (197)
+++-+..|++.. .+..-..++.+++|+|+ | +.|.+...|-+|.+|.+.+.+.. .++. +..+..+
T Consensus 69 k~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPd--grhiL~tseF~lriTVWSL~t~~~~-------~~~~pK~~~kg~ 139 (447)
T KOG4497|consen 69 KDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPD--GRHILLTSEFDLRITVWSLNTQKGY-------LLPHPKTNVKGY 139 (447)
T ss_pred ccceEEEEEeecceeEEEeccCCCcceeeeECCC--cceEeeeecceeEEEEEEeccceeE-------EecccccCceeE
Confidence 456677888764 46677889999999999 7 66778889999999999876432 1222 5567899
Q ss_pred EEccCCCcccceeEE-------------EE-eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 81 TWNHSFSRFNSISIM-------------YE-AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 81 ~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+|+|+|++.+...+. |. ++.+. ...-..+.+.|+|+.- .+-+||.- .+.+..
T Consensus 140 ~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~-~dT~DltgieWsPdg~---------~laVwd~~----Leykv~ 205 (447)
T KOG4497|consen 140 AFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFK-LDTIDLTGIEWSPDGN---------WLAVWDNV----LEYKVY 205 (447)
T ss_pred EECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcC-CCcccccCceECCCCc---------EEEEecch----hhheee
Confidence 999999987655321 11 44454 4556677888885543 34577753 112211
Q ss_pred eeecCc-eecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 147 GNFEDH-YCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 147 ~~~~~h-~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
..| .-.+..++|+|.+++|+.|+.|+.+++-+-
T Consensus 206 ---aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh 239 (447)
T KOG4497|consen 206 ---AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNH 239 (447)
T ss_pred ---eeeeccceeEEEeccccceEEeeccchhhhhhce
Confidence 122 246788999999999999999999988654
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.4e-11 Score=59.14 Aligned_cols=38 Identities=26% Similarity=0.732 Sum_probs=36.1
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
+++..+.+|...|++++|+|++++|++++.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.2e-09 Score=75.68 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=92.4
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCc-EEEEEcCCcccccceeccceeccCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGL-VRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~-v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
+-+.|++++-++. ..+.+|.+.|.|++.+-+ |..+||+|..|+ |+|||..+++.++++...
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~--Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG--------- 223 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQ--GTLVATASTKGTLIRIFDTEDGTLLQELRRG--------- 223 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCC--ccEEEEeccCcEEEEEEEcCCCcEeeeeecC---------
Confidence 4445666655443 246789999999999998 999999999996 689999999877665432
Q ss_pred eeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce--------------
Q psy13207 78 SCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI-------------- 143 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~-------------- 143 (197)
.....|.+++|+++..+|+..++.|++.+|.++.......
T Consensus 224 --------------------------~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpk 277 (346)
T KOG2111|consen 224 --------------------------VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPK 277 (346)
T ss_pred --------------------------CchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccch
Confidence 2456788888886666668888889999888764211000
Q ss_pred -----eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 144 -----ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 144 -----~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
..+..+.-..+...-++|-.+.+-++..+.||+-+=+.+
T Consensus 278 y~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f 321 (346)
T KOG2111|consen 278 YFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKF 321 (346)
T ss_pred hcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEe
Confidence 000111111234455677766455566667788765544
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.8e-10 Score=77.27 Aligned_cols=172 Identities=14% Similarity=0.038 Sum_probs=104.4
Q ss_pred eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 17 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
+...|.+|.+.|+++.|..+ + +|.+|..-|.|++|++.+.+....+.... ...++.+.--|++....-+
T Consensus 6 P~fvLRp~~~~v~s~~fqa~--~-rL~sg~~~G~V~~w~lqt~r~~~~~r~~g----~~~it~lq~~p~d~l~tqgRd~~ 78 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQAN--E-RLMSGLSVGIVKMWVLQTERDLPLIRLFG----RLFITNLQSIPNDSLDTQGRDPL 78 (323)
T ss_pred CeeEeccccchheehhhccc--h-hhhcccccceEEEEEeecCccchhhhhhc----cceeeceeecCCcchhhcCCCce
Confidence 34557799999999999885 4 59999999999999999887655444211 1222222222221111000
Q ss_pred eEEEE-------------------------------------------------------eeEec---ccCCCceeEEEE
Q psy13207 93 SIMYE-------------------------------------------------------AHSIN---AEHKDLIHDVAY 114 (197)
Q Consensus 93 ~~~~~-------------------------------------------------------~~~~~---~~~~~~i~~~~~ 114 (197)
+.+|+ +.... .+....+.+..+
T Consensus 79 L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~ 158 (323)
T KOG0322|consen 79 LILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDK 158 (323)
T ss_pred EEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeec
Confidence 11111 00000 012234556665
Q ss_pred c---CCCeEEEEeeCCCeEEEEEccCCccc-c----eeeeeeec------------------------------------
Q psy13207 115 D---YYGLRMATCSSDQNIKVTRDVMGTRF-D----IETIGNFE------------------------------------ 150 (197)
Q Consensus 115 ~---~~~~~~~s~~~d~~i~~~d~~~~~~~-~----~~~~~~~~------------------------------------ 150 (197)
. +..+++++|-++|.+.+||+.++... + .+......
T Consensus 159 ~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~ 238 (323)
T KOG0322|consen 159 DHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST 238 (323)
T ss_pred cccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc
Confidence 4 66777789999999999998763100 0 00000000
Q ss_pred ----------CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 151 ----------DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 151 ----------~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
-....|..+..-||++.+|+++.|++|++|+.++......+.-|.
T Consensus 239 gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHs 293 (323)
T KOG0322|consen 239 GSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHS 293 (323)
T ss_pred CcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhh
Confidence 002245667888999999999999999999999988766665543
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.2e-09 Score=77.19 Aligned_cols=172 Identities=15% Similarity=0.136 Sum_probs=106.4
Q ss_pred ccccccceeeeee--ee-----cCCCcceeEEEECCCCCCcEEEEE-eCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 7 QSEKCLNQWTRRS--NL-----VDSRTSVTDVKFGPKQLGLVLATC-AADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~~--~~-----~~h~~~v~~~~~~~~~~~~~l~s~-~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
..++.+..|++.. .+ ..+.+....+.++|+ +++|+.+ ..++.|.+|++.....+ .............
T Consensus 9 ~~~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd--~~~lyv~~~~~~~i~~~~~~~~g~l---~~~~~~~~~~~p~ 83 (330)
T PRK11028 9 PESQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPD--KRHLYVGVRPEFRVLSYRIADDGAL---TFAAESPLPGSPT 83 (330)
T ss_pred CCCCCEEEEEECCCCceeeeeEEecCCCCccEEECCC--CCEEEEEECCCCcEEEEEECCCCce---EEeeeecCCCCce
Confidence 3467888888742 11 123456778899998 8877655 46889999999732221 1112222233467
Q ss_pred eEEEccCCCcccce------eEEEEeeE-------ecc-cCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccce
Q psy13207 79 CLTWNHSFSRFNSI------SIMYEAHS-------INA-EHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 79 ~~~~~~~~~~~~~~------~~~~~~~~-------~~~-~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.+.++|+++++.++ +.+|++.. ... .+.....+++++++. .++++...++.|.+||+.+......
T Consensus 84 ~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~ 163 (330)
T PRK11028 84 HISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVA 163 (330)
T ss_pred EEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccc
Confidence 89999999987654 57787321 110 123446777888443 3335566779999999965211100
Q ss_pred e--eeeeecCceecEEEEEEccCCCEEEEEeC-CCcEEEEEcCC
Q psy13207 144 E--TIGNFEDHYCTVWRVSWNITGTIVASSGD-DGCVRLWKLKK 184 (197)
Q Consensus 144 ~--~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~~ 184 (197)
. ....... ......++|+|+|++++++.. +++|.+|+++.
T Consensus 164 ~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 164 QEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred cCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 0 0011111 234578999999999988875 89999999974
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.5e-11 Score=90.06 Aligned_cols=156 Identities=15% Similarity=0.188 Sum_probs=107.7
Q ss_pred EEECCCCCCcEEEEEeCCCcEEEE--EcCCcc--------------cccceeccceecc-CCCeeeEEEccCCCcccce-
Q psy13207 31 VKFGPKQLGLVLATCAADGLVRIY--EAPDVM--------------NLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~dg~v~iw--~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 92 (197)
+.+.|.......++...|....+| ++.... ..+.|.+..++.. ...++.+.|+|....++++
T Consensus 234 i~~~~~~~k~~~~g~d~~l~~~l~~~tla~l~I~~~~dd~~~~k~a~~k~w~ik~tl~s~~d~ir~l~~~~sep~lit~s 313 (577)
T KOG0642|consen 234 ITNPPEGTKSISVGADEDLMSRLGLGTLAGLTIEDEFDDLSDLKKAFTKKWNIKFTLRSHDDCIRALAFHPSEPVLITAS 313 (577)
T ss_pred ccCCcccCCCccccCchHHHHhhcccchhcccccccccchhhhhhhhheecceeeeeecchhhhhhhhcCCCCCeEEEec
Confidence 444454223456677777788888 332111 1222433333332 5567788888877776655
Q ss_pred ----eEEEE--------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc-ccc----eeeeeee
Q psy13207 93 ----SIMYE--------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT-RFD----IETIGNF 149 (197)
Q Consensus 93 ----~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~-~~~----~~~~~~~ 149 (197)
+.+|. +.++. +|..+|.|+++..+.-.+.+|+-||+|+.|++..+. ..+ ......+
T Consensus 314 ed~~lk~WnLqk~~~s~~~~~epi~tfr-aH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l 392 (577)
T KOG0642|consen 314 EDGTLKLWNLQKAKKSAEKDVEPILTFR-AHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTL 392 (577)
T ss_pred cccchhhhhhcccCCccccceeeeEEEe-cccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccce
Confidence 67787 56677 899999999999333333999999999999775311 111 1234567
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.||.+.|+.+++|+....|++++.||++++|+......
T Consensus 393 ~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 393 LGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred eccccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 89999999999999988999999999999999876554
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.8e-09 Score=73.50 Aligned_cols=102 Identities=16% Similarity=0.227 Sum_probs=71.0
Q ss_pred CcceeEEEECCCCCCcEEEE--EeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eE
Q psy13207 25 RTSVTDVKFGPKQLGLVLAT--CAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SI 94 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s--~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 94 (197)
.++|.+++|+|+ |+.|+. |..++.|.+||++ .+.+. .+. ...+..+.|+|+|++++.+ +.
T Consensus 59 ~~~I~~~~WsP~--g~~favi~g~~~~~v~lyd~~-~~~i~------~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~ 128 (194)
T PF08662_consen 59 EGPIHDVAWSPN--GNEFAVIYGSMPAKVTLYDVK-GKKIF------SFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLE 128 (194)
T ss_pred CCceEEEEECcC--CCEEEEEEccCCcccEEEcCc-ccEeE------eec-CCCceEEEECCCCCEEEEEEccCCCcEEE
Confidence 457999999998 877654 4467899999996 22222 221 4567789999999998654 68
Q ss_pred EEEe---eEecccCCCceeEEEEcCCCeEEEEeeC------CCeEEEEEcc
Q psy13207 95 MYEA---HSINAEHKDLIHDVAYDYYGLRMATCSS------DQNIKVTRDV 136 (197)
Q Consensus 95 ~~~~---~~~~~~~~~~i~~~~~~~~~~~~~s~~~------d~~i~~~d~~ 136 (197)
+||. ..+...+...+..++|+|+.-+|+++.. |+.++||+..
T Consensus 129 ~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 129 FWDVRKKKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred EEECCCCEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 9992 2222233456789999955444477654 7888899875
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-09 Score=81.50 Aligned_cols=147 Identities=10% Similarity=0.116 Sum_probs=108.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCC------------------c--ccc-----ee
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFS------------------R--FNS-----IS 93 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~--~~~-----~~ 93 (197)
..++|....||++++|+...++...+|...... ...+.+..|.-.-. + ++- .+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~--s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASL--SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhc--cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 689999999999999999888766655544433 44555566542110 0 011 14
Q ss_pred EEEE------eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 94 IMYE------AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 94 ~~~~------~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
.+|+ ...+. ..|...|.++.++.+.-.|.+++.|+.+..|+... ...++.+.+....+.+++.+|||.
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~-----~~~~~~~~~~~~~~~sl~is~D~~ 157 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKE-----KVIIRIWKEQKPLVSSLCISPDGK 157 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEeccc-----ceeeeeeccCCCccceEEEcCCCC
Confidence 5666 11222 36899999999984443349999999999999965 677778888888899999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
++++++ +.|++||+.+++.+..+..|
T Consensus 158 ~l~~as--~~ik~~~~~~kevv~~ftgh 183 (541)
T KOG4547|consen 158 ILLTAS--RQIKVLDIETKEVVITFTGH 183 (541)
T ss_pred EEEecc--ceEEEEEccCceEEEEecCC
Confidence 999887 68999999998887776654
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-08 Score=78.32 Aligned_cols=150 Identities=10% Similarity=0.047 Sum_probs=95.9
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeC---CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAA---DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
.+..|...+...+|+|+ |+.|+..+. +..|.+||+.+++... + . .....+....|+|+|+.++..
T Consensus 196 ~lt~~~~~v~~p~wSpD--G~~lay~s~~~g~~~i~~~dl~~g~~~~-l---~--~~~g~~~~~~~SPDG~~la~~~~~~ 267 (435)
T PRK05137 196 YLTDGSSLVLTPRFSPN--RQEITYMSYANGRPRVYLLDLETGQREL-V---G--NFPGMTFAPRFSPDGRKVVMSLSQG 267 (435)
T ss_pred EEecCCCCeEeeEECCC--CCEEEEEEecCCCCEEEEEECCCCcEEE-e---e--cCCCcccCcEECCCCCEEEEEEecC
Confidence 46678889999999999 888887753 4689999998764321 1 1 113456788999999987532
Q ss_pred ----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEee-CCC--eEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+.+|+ +..+. .+........|+++.-.++..+ .++ .|.++|.... ....+..+...+....
T Consensus 268 g~~~Iy~~d~~~~~~~~Lt-~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~------~~~~lt~~~~~~~~~~ 340 (435)
T PRK05137 268 GNTDIYTMDLRSGTTTRLT-DSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS------NPRRISFGGGRYSTPV 340 (435)
T ss_pred CCceEEEEECCCCceEEcc-CCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC------CeEEeecCCCcccCeE
Confidence 45556 33444 4455566788984332224444 333 5777776541 1222222344566789
Q ss_pred EccCCCEEEEEeCC---CcEEEEEcCC
Q psy13207 161 WNITGTIVASSGDD---GCVRLWKLKK 184 (197)
Q Consensus 161 ~~p~~~~l~~~~~d---g~i~iw~~~~ 184 (197)
|+|+|++|+..+.+ ..|.+||+..
T Consensus 341 ~SpdG~~ia~~~~~~~~~~i~~~d~~~ 367 (435)
T PRK05137 341 WSPRGDLIAFTKQGGGQFSIGVMKPDG 367 (435)
T ss_pred ECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 99999999887643 3577788754
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.5e-08 Score=74.63 Aligned_cols=155 Identities=9% Similarity=0.142 Sum_probs=94.1
Q ss_pred cceeEEEECCCCCCcEEE-EEeCCCcEEEEEcCCcccccce-eccceeccCCCeeeEEEccCCCcccce------eEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLA-TCAADGLVRIYEAPDVMNLSQW-CLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~-s~~~dg~v~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 97 (197)
....++.++|+ +++++ +...++.|.+||+.+...+... ..............+.|+|++++++.. +.+|+
T Consensus 126 ~~~~~~~~~p~--g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~ 203 (330)
T PRK11028 126 EGCHSANIDPD--NRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQ 203 (330)
T ss_pred CcccEeEeCCC--CCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEE
Confidence 34677889998 87764 5556799999999764322110 011112224556789999999987443 67787
Q ss_pred eeE----------ecc--c---CCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 98 AHS----------INA--E---HKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 98 ~~~----------~~~--~---~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+.. +.. . +......+.++|+.-+++++. .++.|.+|++...... ...+..... ......+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~-~~~~~~~~~-~~~p~~~~~ 281 (330)
T PRK11028 204 LKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSV-LSFEGHQPT-ETQPRGFNI 281 (330)
T ss_pred EeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCe-EEEeEEEec-cccCCceEE
Confidence 421 110 0 111233577885433336654 4789999998642100 122222221 123467899
Q ss_pred ccCCCEEEEEeC-CCcEEEEEcCC
Q psy13207 162 NITGTIVASSGD-DGCVRLWKLKK 184 (197)
Q Consensus 162 ~p~~~~l~~~~~-dg~i~iw~~~~ 184 (197)
+|+|++|+++.. +++|.+|+++.
T Consensus 282 ~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 282 DHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred CCCCCEEEEEEccCCcEEEEEEcC
Confidence 999999998775 89999998853
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-09 Score=74.79 Aligned_cols=77 Identities=14% Similarity=0.066 Sum_probs=64.1
Q ss_pred cCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecEEEEEEcc-CCCEEEEEeCCCcEE
Q psy13207 104 EHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWNI-TGTIVASSGDDGCVR 178 (197)
Q Consensus 104 ~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~ 178 (197)
.|..++....|+ |+.+ .+|+.|+.+..||+|.. .+.+.. .+-|...|.++.-+| .+.++++|+.|..|+
T Consensus 163 ~He~E~Wta~f~~~~pnlv--ytGgDD~~l~~~D~R~p----~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~ 236 (339)
T KOG0280|consen 163 VHEFEAWTAKFSDKEPNLV--YTGGDDGSLSCWDIRIP----KTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIR 236 (339)
T ss_pred ccceeeeeeecccCCCceE--EecCCCceEEEEEecCC----cceeeecceeeecceEEEecCCCCCceEEEecccccee
Confidence 788889999998 8888 99999999999999842 233333 456888999998887 688999999999999
Q ss_pred EEEcCCCc
Q psy13207 179 LWKLKKKR 186 (197)
Q Consensus 179 iw~~~~~~ 186 (197)
+||.++.+
T Consensus 237 ~~DtRnm~ 244 (339)
T KOG0280|consen 237 VLDTRNMG 244 (339)
T ss_pred eeehhccc
Confidence 99999644
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.5e-09 Score=78.24 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=100.9
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eEEEE-
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SIMYE- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~- 97 (197)
.+..+..+|. ++++|.+..+....++++..... ..++..........+.+.|..+......+ +.+|.
T Consensus 64 a~~~~~~s~~--~~llAv~~~~K~~~~f~~~~~~~--~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~ 139 (390)
T KOG3914|consen 64 APALVLTSDS--GRLVAVATSSKQRAVFDYRENPK--GAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSA 139 (390)
T ss_pred cccccccCCC--ceEEEEEeCCCceEEEEEecCCC--cceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecc
Confidence 3445556676 88898888888877777765433 12222222223444455554444332211 22232
Q ss_pred ----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecEEEEEEccCCCEEEEEe
Q psy13207 98 ----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
...+- +|-+.+..++++++.-+++++.+|..|++-.... ...+.. +-||+.-|..++.-++ ..|+++|
T Consensus 140 ~~~~~~~~l-GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa-----~f~IesfclGH~eFVS~isl~~~-~~LlS~s 212 (390)
T KOG3914|consen 140 DSGRCEPIL-GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPA-----TFVIESFCLGHKEFVSTISLTDN-YLLLSGS 212 (390)
T ss_pred cccCcchhh-hhhhhhheeeecCCCCEEEEecCCceEEEEecCc-----ccchhhhccccHhheeeeeeccC-ceeeecC
Confidence 22233 7889999999994444449999999999987754 233333 3579999999999865 4589999
Q ss_pred CCCcEEEEEcCCCcchhhh
Q psy13207 173 DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 173 ~dg~i~iw~~~~~~~~~~~ 191 (197)
.|+++++||+.++++..+.
T Consensus 213 GD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 213 GDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred CCCcEEEEecccCCccccc
Confidence 9999999999998876543
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=93.01 Aligned_cols=159 Identities=15% Similarity=0.186 Sum_probs=120.8
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
++.+-..|.++.=+|. ..+.+||+.||.+++|....+..+..+.... ...++.+.|+.+|+.+..+ +.+
T Consensus 2204 ~k~~v~~v~r~~sHp~--~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g----~s~vtr~~f~~qGnk~~i~d~dg~l~l 2277 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPS--DPYYLTGSQDGSVRMFEWGHGQQVVCFRTAG----NSRVTRSRFNHQGNKFGIVDGDGDLSL 2277 (2439)
T ss_pred eecccCceeeecCCCC--CceEEecCCCceEEEEeccCCCeEEEeeccC----cchhhhhhhcccCCceeeeccCCceee
Confidence 3445567888888887 7889999999999999998876654443222 4678889999999887544 677
Q ss_pred EE-----eeEecccCCCceeEEEEcCCCeEEEEee---CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE-----AHSINAEHKDLIHDVAYDYYGLRMATCS---SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~---~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
|. ....+ .|.......+|-+..+ ++++ .++.+.+||.--.. ...++. .+|.+.++++++.|..+.
T Consensus 2278 ~q~~pk~~~s~q-chnk~~~Df~Fi~s~~--~tag~s~d~~n~~lwDtl~~~--~~s~v~--~~H~~gaT~l~~~P~~ql 2350 (2439)
T KOG1064|consen 2278 WQASPKPYTSWQ-CHNKALSDFRFIGSLL--ATAGRSSDNRNVCLWDTLLPP--MNSLVH--TCHDGGATVLAYAPKHQL 2350 (2439)
T ss_pred cccCCcceeccc-cCCccccceeeeehhh--hccccCCCCCcccchhcccCc--ccceee--eecCCCceEEEEcCcceE
Confidence 87 22333 6888888888887666 7764 35889999974311 122333 789999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
|++|+.+|.|++||++..+....++
T Consensus 2351 lisggr~G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2351 LISGGRKGEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred EEecCCcCcEEEeehHHHHHHHHhh
Confidence 9999999999999999877655544
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.3e-10 Score=84.98 Aligned_cols=166 Identities=10% Similarity=0.104 Sum_probs=112.7
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceec-cCCCeeeEEEccCCCcccce---eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI---SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~ 94 (197)
.+.||+..|.++.--.+ .+-+++++.|.+|++|.++... .+.+-..+.++. ++.+|.++.|-.+.++++++ +.
T Consensus 730 nf~GH~~~iRai~AidN--ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giH 807 (1034)
T KOG4190|consen 730 NFTGHQEKIRAIAAIDN--ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIH 807 (1034)
T ss_pred cccCcHHHhHHHHhccc--ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcce
Confidence 47899999988876665 7789999999999999997532 222111122222 37889999999999888754 89
Q ss_pred EEE------eeEec-c-cCC--CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 95 MYE------AHSIN-A-EHK--DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 95 ~~~------~~~~~-~-~~~--~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+|| +..+. . .|. ..|.++.--...++++.|+...+|+++|.+.......-.+..-.+....+.+++..|.
T Consensus 808 lWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~ 887 (1034)
T KOG4190|consen 808 LWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK 887 (1034)
T ss_pred eecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence 999 11111 0 122 2334433223444446678899999999987321111112222344567899999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 165 GTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
|+.++.+-..|.|-+.|.++++.
T Consensus 888 GN~lAa~LSnGci~~LDaR~G~v 910 (1034)
T KOG4190|consen 888 GNKLAAALSNGCIAILDARNGKV 910 (1034)
T ss_pred cchhhHHhcCCcEEEEecCCCce
Confidence 99999999999999999999873
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-08 Score=77.53 Aligned_cols=153 Identities=12% Similarity=0.095 Sum_probs=94.1
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCC---CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAAD---GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+..+...+.+.+|+|+ |+.|+..+.+ ..|.+||+.+++... + .. .........|+|+++.++..
T Consensus 191 l~~~~~~v~~p~wSPD--G~~la~~s~~~~~~~I~~~dl~~g~~~~-l---~~--~~g~~~~~~~SPDG~~la~~~~~~g 262 (427)
T PRK02889 191 ALSSPEPIISPAWSPD--GTKLAYVSFESKKPVVYVHDLATGRRRV-V---AN--FKGSNSAPAWSPDGRTLAVALSRDG 262 (427)
T ss_pred eccCCCCcccceEcCC--CCEEEEEEccCCCcEEEEEECCCCCEEE-e---ec--CCCCccceEECCCCCEEEEEEccCC
Confidence 4567788999999999 8888877643 359999998775321 1 11 13345688999999987532
Q ss_pred -eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 93 -SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 93 -~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
..+|. +..+. .+........|+++.-.|+..+ .++...+|.+...... .+.+ .+. .......+|+|
T Consensus 263 ~~~Iy~~d~~~~~~~~lt-~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~-~~~l-t~~--g~~~~~~~~Sp 337 (427)
T PRK02889 263 NSQIYTVNADGSGLRRLT-QSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA-AQRV-TFT--GSYNTSPRISP 337 (427)
T ss_pred CceEEEEECCCCCcEECC-CCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc-eEEE-ecC--CCCcCceEECC
Confidence 34554 33333 3444456678984332224433 4566677765421100 1111 122 22334678999
Q ss_pred CCCEEEEEeCCC---cEEEEEcCCCc
Q psy13207 164 TGTIVASSGDDG---CVRLWKLKKKR 186 (197)
Q Consensus 164 ~~~~l~~~~~dg---~i~iw~~~~~~ 186 (197)
||++|+..+.++ .|.+||+.+++
T Consensus 338 DG~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 338 DGKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred CCCEEEEEEccCCcEEEEEEECCCCC
Confidence 999998877654 59999997654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.6e-09 Score=75.47 Aligned_cols=153 Identities=18% Similarity=0.241 Sum_probs=99.0
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC-------------------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS------------------- 85 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 85 (197)
.+.|+.+..+|. .+.|++.+.++.|.+||.+.........+.. ..+.....+.|+|.
T Consensus 149 ~~~VY~m~~~P~--DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~A--N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~ 224 (609)
T KOG4227|consen 149 RGDVYHMDQHPT--DNTLIVVTRAKLVSFIDNRDRQNPISLVLPA--NSGKNFYTAEFHPETPALILVNSETGGPNVFDR 224 (609)
T ss_pred ccceeecccCCC--CceEEEEecCceEEEEeccCCCCCCceeeec--CCCccceeeeecCCCceeEEeccccCCCCceee
Confidence 348999999998 8899999999999999998653211111111 01233444444444
Q ss_pred -------------------------------CCcccce-----eEEEE-----eeEecccCCC-------ceeEEEEc-C
Q psy13207 86 -------------------------------FSRFNSI-----SIMYE-----AHSINAEHKD-------LIHDVAYD-Y 116 (197)
Q Consensus 86 -------------------------------~~~~~~~-----~~~~~-----~~~~~~~~~~-------~i~~~~~~-~ 116 (197)
|..+.+- -.+|| +..++..|+. .+.+++|. .
T Consensus 225 R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D 304 (609)
T KOG4227|consen 225 RMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDD 304 (609)
T ss_pred ccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecc
Confidence 4333211 12333 2223222332 35667777 4
Q ss_pred CCeEEEEeeCCCeEEEEEccCCcc------------------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 117 YGLRMATCSSDQNIKVTRDVMGTR------------------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 117 ~~~~~~s~~~d~~i~~~d~~~~~~------------------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
..+ ++|+.+-.|++|.+..... .-...+..+++|..-++.+.|+|...+|++.+-.+.++
T Consensus 305 ~~v--~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~K 382 (609)
T KOG4227|consen 305 YTV--ATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFK 382 (609)
T ss_pred eee--eccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhhee
Confidence 446 8999999999998753110 00123456789999999999999999999999999999
Q ss_pred EEEcC
Q psy13207 179 LWKLK 183 (197)
Q Consensus 179 iw~~~ 183 (197)
||...
T Consensus 383 lWS~~ 387 (609)
T KOG4227|consen 383 LWSDH 387 (609)
T ss_pred ccccc
Confidence 99653
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-08 Score=77.69 Aligned_cols=161 Identities=11% Similarity=0.079 Sum_probs=98.1
Q ss_pred ccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCC---CcEEEEEcCCcccccceeccceeccCCCeeeEEEc
Q psy13207 11 CLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAAD---GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWN 83 (197)
Q Consensus 11 ~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (197)
++.+|+.. ..+..+...+.+..|+|+ |+.|+.++.+ ..|.+||+.+++... .... ........|+
T Consensus 185 ~l~i~D~~g~~~~~lt~~~~~v~~p~wSpD--g~~la~~s~~~~~~~l~~~dl~~g~~~~----l~~~--~g~~~~~~~S 256 (433)
T PRK04922 185 ALQVADSDGYNPQTILRSAEPILSPAWSPD--GKKLAYVSFERGRSAIYVQDLATGQREL----VASF--RGINGAPSFS 256 (433)
T ss_pred EEEEECCCCCCceEeecCCCccccccCCCC--CCEEEEEecCCCCcEEEEEECCCCCEEE----eccC--CCCccCceEC
Confidence 45555532 235567778999999999 9888877643 469999997764321 1111 2234578999
Q ss_pred cCCCcccce--------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEee-CCCe--EEEEEccCCcccceeeee
Q psy13207 84 HSFSRFNSI--------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQN--IKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 84 ~~~~~~~~~--------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~--i~~~d~~~~~~~~~~~~~ 147 (197)
|+++.++.. +.+|+ +..+. .+.......+|+++.-.|+.++ .++. |.++|+.++ . ..
T Consensus 257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt-~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g-----~-~~ 329 (433)
T PRK04922 257 PDGRRLALTLSRDGNPEIYVMDLGSRQLTRLT-NHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGG-----S-AE 329 (433)
T ss_pred CCCCEEEEEEeCCCCceEEEEECCCCCeEECc-cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC-----C-eE
Confidence 999977532 66677 33333 3444456788984332225444 4455 555565432 1 11
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCC---cEEEEEcCCCc
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDG---CVRLWKLKKKR 186 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg---~i~iw~~~~~~ 186 (197)
.+..+.......+|+|+|++++..+.++ .|.+||+.+++
T Consensus 330 ~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 330 RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 1111223345689999999998765443 58999987654
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.4e-08 Score=75.79 Aligned_cols=151 Identities=9% Similarity=0.019 Sum_probs=94.0
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEe---CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCA---ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~---~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+..+...+...+|+|+ |+.|+..+ .+..+.+|++.+++... ...+ ........|+|+|+.++..
T Consensus 194 lt~~~~~~~~p~wSPD--G~~la~~s~~~g~~~i~i~dl~~G~~~~----l~~~--~~~~~~~~~SPDG~~La~~~~~~g 265 (429)
T PRK03629 194 VHRSPQPLMSPAWSPD--GSKLAYVTFESGRSALVIQTLANGAVRQ----VASF--PRHNGAPAFSPDGSKLAFALSKTG 265 (429)
T ss_pred eecCCCceeeeEEcCC--CCEEEEEEecCCCcEEEEEECCCCCeEE----ccCC--CCCcCCeEECCCCCEEEEEEcCCC
Confidence 4456678999999999 98887654 24578999987764221 1111 2334568999999987632
Q ss_pred ---eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeC-CCeEEEE--EccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ---SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSS-DQNIKVT--RDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ---~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~--d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+.+|+ +..+. .+...+....|+|+.-.|+..+. ++...+| |+.++ . ...+..+........|
T Consensus 266 ~~~I~~~d~~tg~~~~lt-~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g-----~-~~~lt~~~~~~~~~~~ 338 (429)
T PRK03629 266 SLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG-----A-PQRITWEGSQNQDADV 338 (429)
T ss_pred CcEEEEEECCCCCEEEcc-CCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC-----C-eEEeecCCCCccCEEE
Confidence 56677 33333 34456778899944322255444 4555555 54431 1 2222223334567899
Q ss_pred ccCCCEEEEEeCC---CcEEEEEcCCCc
Q psy13207 162 NITGTIVASSGDD---GCVRLWKLKKKR 186 (197)
Q Consensus 162 ~p~~~~l~~~~~d---g~i~iw~~~~~~ 186 (197)
+|||++|+..+.+ ..|.+||+.++.
T Consensus 339 SpDG~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 339 SSDGKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred CCCCCEEEEEEccCCCceEEEEECCCCC
Confidence 9999999876643 357888987654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.6e-08 Score=72.38 Aligned_cols=170 Identities=12% Similarity=0.176 Sum_probs=108.2
Q ss_pred ccccccceeeeeee----ecC-CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc----ee--cccee--cc
Q psy13207 7 QSEKCLNQWTRRSN----LVD-SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ----WC--LQHEV--AC 73 (197)
Q Consensus 7 ~~~~~~~~w~~~~~----~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~----~~--~~~~~--~~ 73 (197)
.-|..||+|+...+ ++. ....|+|++|-|.. +..|+.|+.. -|.||.....-.... .. ..+.+ ++
T Consensus 117 ~nddvVriy~ksst~pt~Lks~sQrnvtclawRPls-aselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pg 194 (445)
T KOG2139|consen 117 TNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLS-ASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPG 194 (445)
T ss_pred ccCcEEEEeccCCCCCceecchhhcceeEEEeccCC-cceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCC
Confidence 44566777765432 332 34579999999963 6788888876 566898753321111 00 11112 23
Q ss_pred CCCeeeEEEccCCCcccce------eEEEEee-----EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 74 PTLASCLTWNHSFSRFNSI------SIMYEAH-----SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
..+|+++.|.+||..++++ +.+||.. .+...-...+.-+.|+|+.-+|+++.-|+..++|.....
T Consensus 195 h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~---- 270 (445)
T KOG2139|consen 195 HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQS---- 270 (445)
T ss_pred CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhccc----
Confidence 6789999999999987654 8999911 111123456788999955555599999999999965431
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.....-.- ..+.|..-+|+|+|++|+-.+. |.-++|.+..
T Consensus 271 wt~erw~l-gsgrvqtacWspcGsfLLf~~s-gsp~lysl~f 310 (445)
T KOG2139|consen 271 WTKERWIL-GSGRVQTACWSPCGSFLLFACS-GSPRLYSLTF 310 (445)
T ss_pred ceecceec-cCCceeeeeecCCCCEEEEEEc-CCceEEEEee
Confidence 22222222 2348999999999987766654 4555665543
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.5e-09 Score=83.02 Aligned_cols=124 Identities=12% Similarity=0.128 Sum_probs=94.2
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEec
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSIN 102 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (197)
.|.-.++|.+++|. +.++|++..||+|.+|.-...... ...++.+-
T Consensus 203 ~Htf~~t~~~~spn--~~~~Aa~d~dGrI~vw~d~~~~~~-----------~~t~t~lH--------------------- 248 (792)
T KOG1963|consen 203 HHTFNITCVALSPN--ERYLAAGDSDGRILVWRDFGSSDD-----------SETCTLLH--------------------- 248 (792)
T ss_pred hhcccceeEEeccc--cceEEEeccCCcEEEEeccccccc-----------cccceEEE---------------------
Confidence 57777999999998 999999999999999974331100 22333333
Q ss_pred ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 103 AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 103 ~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
=|...|++++|+.+.-.|++|+.++.+-+|.+.++. .+. +..-..+|..+.++||+.+.+....|+.|.+-..
T Consensus 249 -WH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~---kqf---LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 249 -WHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK---KQF---LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred -ecccccceeEEecCCceEeecccceEEEEEeecCCC---ccc---ccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 477889999999444344999999999999998732 222 2334568999999999999999999999999988
Q ss_pred CCCcc
Q psy13207 183 KKKRK 187 (197)
Q Consensus 183 ~~~~~ 187 (197)
.+...
T Consensus 322 ~dl~~ 326 (792)
T KOG1963|consen 322 SDLEI 326 (792)
T ss_pred cchhh
Confidence 65443
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-07 Score=66.83 Aligned_cols=159 Identities=14% Similarity=0.175 Sum_probs=94.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCC-------cccce----e
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFS-------RFNSI----S 93 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~----~ 93 (197)
.=.-++|+|+ +.+||.+...|+|+++|+...+ +-.......... ...|..+.|.+... .++.. +
T Consensus 45 QWRkl~WSpD--~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L 121 (282)
T PF15492_consen 45 QWRKLAWSPD--CTLLAYAESTGTIRVFDLMGSE-LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQL 121 (282)
T ss_pred hheEEEECCC--CcEEEEEcCCCeEEEEecccce-eEEcCcccccCCccccceeeeEeeccccccccceeEEEEecccee
Confidence 3467899999 9999999999999999987532 212221111122 45667776665431 11111 1
Q ss_pred EEEE-------------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCe----------EEEEEccCCccc--------
Q psy13207 94 IMYE-------------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQN----------IKVTRDVMGTRF-------- 141 (197)
Q Consensus 94 ~~~~-------------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~----------i~~~d~~~~~~~-------- 141 (197)
+-|- ...+...+...|.++.|+ .+.++++.|+.... +..|.+-+....
T Consensus 122 ~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~ 201 (282)
T PF15492_consen 122 RSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSE 201 (282)
T ss_pred eeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccC
Confidence 1111 112221346789999999 55566666665433 344543221000
Q ss_pred ---c-----eee--eee---e---cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 142 ---D-----IET--IGN---F---EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 142 ---~-----~~~--~~~---~---~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
. ... +.. + ......|..+..||||+.||+...+|.|.+|++.+....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~ 264 (282)
T PF15492_consen 202 DDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQ 264 (282)
T ss_pred ccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhh
Confidence 0 000 000 1 112467899999999999999999999999999876543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.8e-09 Score=83.06 Aligned_cols=144 Identities=15% Similarity=0.142 Sum_probs=99.5
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE-----ee-EecccCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE-----AH-SINAEHKD 107 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~-~~~~~~~~ 107 (197)
...++.++.++.+-|||................. -....-+-++++.-+++++ +.+|+ .. .+. +|..
T Consensus 99 ~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~-l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~-GHeG 176 (967)
T KOG0974|consen 99 NKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCT-LYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLK-GHEG 176 (967)
T ss_pred cceEEEEEcCceEEEEecccCceehhcCCCceEE-EEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceec-ccCC
Confidence 5578888888999999987664332211100000 1112223334444444443 68888 22 245 8999
Q ss_pred ceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeee-eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 108 LIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETI-GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 108 ~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.|..+.|+ +.++ +++++|..+|+|++++. +.. ...-+|...|+.++|.|+ ++++++.|-+.++|+.+
T Consensus 177 ~iF~i~~s~dg~~i--~s~SdDRsiRlW~i~s~-----~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~- 246 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYI--ASVSDDRSIRLWPIDSR-----EVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN- 246 (967)
T ss_pred ceEEEEEccCCcEE--EEEecCcceeeeecccc-----cccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-
Confidence 99999997 7777 99999999999999873 333 356689999999999998 89999999999999664
Q ss_pred Ccchhhhhhh
Q psy13207 185 KRKKKKEEEE 194 (197)
Q Consensus 185 ~~~~~~~~~~ 194 (197)
..+++.+.+|
T Consensus 247 ~~~l~~y~~h 256 (967)
T KOG0974|consen 247 GTQLEVYDEH 256 (967)
T ss_pred cceehhhhhh
Confidence 3445555443
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.2e-08 Score=75.17 Aligned_cols=150 Identities=13% Similarity=0.161 Sum_probs=95.3
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCC---CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAAD---GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+..+...+....|+|+ |++|+.++.+ ..|++||+.+++... ... ......++.|+|+++.++..
T Consensus 185 l~~~~~~~~~p~~Spd--g~~la~~~~~~~~~~i~v~d~~~g~~~~----~~~--~~~~~~~~~~spDg~~l~~~~~~~~ 256 (417)
T TIGR02800 185 ITRSREPILSPAWSPD--GQKLAYVSFESGKPEIYVQDLATGQREK----VAS--FPGMNGAPAFSPDGSKLAVSLSKDG 256 (417)
T ss_pred eecCCCceecccCCCC--CCEEEEEEcCCCCcEEEEEECCCCCEEE----eec--CCCCccceEECCCCCEEEEEECCCC
Confidence 4556667889999999 9888877644 479999998764321 111 13345678999999876532
Q ss_pred ---eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeC-CC--eEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ---SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSS-DQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ---~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+.+|+ ...+. .+........|+++.-.|+..+. ++ .|.++|+.+. . ...+..+...+....|
T Consensus 257 ~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~-----~-~~~l~~~~~~~~~~~~ 329 (417)
T TIGR02800 257 NPDIYVMDLDGKQLTRLT-NGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGG-----E-VRRLTFRGGYNASPSW 329 (417)
T ss_pred CccEEEEECCCCCEEECC-CCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCC-----C-EEEeecCCCCccCeEE
Confidence 56666 23333 33334456688843322244443 33 5666776542 2 2223334456678899
Q ss_pred ccCCCEEEEEeCCC---cEEEEEcCCC
Q psy13207 162 NITGTIVASSGDDG---CVRLWKLKKK 185 (197)
Q Consensus 162 ~p~~~~l~~~~~dg---~i~iw~~~~~ 185 (197)
+|+|++++.++.++ .|.+||+.++
T Consensus 330 spdg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 330 SPDGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred CCCCCEEEEEEccCCceEEEEEeCCCC
Confidence 99999999888776 7888888763
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.4e-10 Score=82.48 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=100.7
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
++.| ..|..+.|-|. --+|++++..|.++--|+.+++.+..+... ...+..+.-+|-+..+-.+ +.+
T Consensus 206 lk~~-~~v~rLeFLPy--HfLL~~~~~~G~L~Y~DVS~GklVa~~~t~-----~G~~~vm~qNP~NaVih~GhsnGtVSl 277 (545)
T KOG1272|consen 206 LKRH-IRVARLEFLPY--HFLLVAASEAGFLKYQDVSTGKLVASIRTG-----AGRTDVMKQNPYNAVIHLGHSNGTVSL 277 (545)
T ss_pred hhhc-Cchhhhcccch--hheeeecccCCceEEEeechhhhhHHHHcc-----CCccchhhcCCccceEEEcCCCceEEe
Confidence 4433 57889999998 778999999999999999998765443321 3455556666655544322 677
Q ss_pred EE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
|. +..+- .|..+|.+|++. +++. +|.+.|..++|||++. ...+.++.. ..+...+++|..| +
T Consensus 278 WSP~skePLvKiL-cH~g~V~siAv~~~G~YM--aTtG~Dr~~kIWDlR~-----~~ql~t~~t-p~~a~~ls~Sqkg-l 347 (545)
T KOG1272|consen 278 WSPNSKEPLVKIL-CHRGPVSSIAVDRGGRYM--ATTGLDRKVKIWDLRN-----FYQLHTYRT-PHPASNLSLSQKG-L 347 (545)
T ss_pred cCCCCcchHHHHH-hcCCCcceEEECCCCcEE--eecccccceeEeeecc-----ccccceeec-CCCcccccccccc-c
Confidence 87 44455 799999999999 6666 9999999999999986 233333333 3456778888655 3
Q ss_pred EEEEeCCCcEEEEE
Q psy13207 168 VASSGDDGCVRLWK 181 (197)
Q Consensus 168 l~~~~~dg~i~iw~ 181 (197)
|| .+....|.||.
T Consensus 348 LA-~~~G~~v~iw~ 360 (545)
T KOG1272|consen 348 LA-LSYGDHVQIWK 360 (545)
T ss_pred ee-eecCCeeeeeh
Confidence 44 44556899994
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-08 Score=77.75 Aligned_cols=156 Identities=17% Similarity=0.247 Sum_probs=98.8
Q ss_pred CCCcceeEEEECCCCCCcE-EEEEeCCCcEEEEEcCCcccc---------cceeccc-------------eec-------
Q psy13207 23 DSRTSVTDVKFGPKQLGLV-LATCAADGLVRIYEAPDVMNL---------SQWCLQH-------------EVA------- 72 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~-l~s~~~dg~v~iw~~~~~~~~---------~~~~~~~-------------~~~------- 72 (197)
.|...-+.+..+|+ |++ +|||..--.|++||+.....- ..+.+.. .++
T Consensus 49 e~p~ast~ik~s~D--GqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~ 126 (703)
T KOG2321|consen 49 EMPTASTRIKVSPD--GQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGR 126 (703)
T ss_pred CCccccceeEecCC--CcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCe
Confidence 57888899999999 876 578888899999998754210 0010000 000
Q ss_pred -----cCCCeeeEEEcc-CCCcc--cceeEEEE--------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEE
Q psy13207 73 -----CPTLASCLTWNH-SFSRF--NSISIMYE--------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTR 134 (197)
Q Consensus 73 -----~~~~~~~~~~~~-~~~~~--~~~~~~~~--------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d 134 (197)
-+.....++++. ....+ +++..+|. +..+. .....++++..+ ..++ ++|+.+|.|..||
T Consensus 127 hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~-~~~~~lN~v~in~~hgLl--a~Gt~~g~VEfwD 203 (703)
T KOG2321|consen 127 HYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFE-TDSGELNVVSINEEHGLL--ACGTEDGVVEFWD 203 (703)
T ss_pred eeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccc-cccccceeeeecCccceE--EecccCceEEEec
Confidence 011112222221 11111 12234444 44455 456788999998 4444 8888899999999
Q ss_pred ccCCcccceeeeee------ecCcee-----cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 135 DVMGTRFDIETIGN------FEDHYC-----TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 135 ~~~~~~~~~~~~~~------~~~h~~-----~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+. ...+.. ...|.. .|+++.|+.+|-.+++|+.+|.+.|||++..+..
T Consensus 204 pR~-----ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl 263 (703)
T KOG2321|consen 204 PRD-----KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL 263 (703)
T ss_pred chh-----hhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCce
Confidence 986 222222 222333 4899999999999999999999999999986643
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-09 Score=82.03 Aligned_cols=162 Identities=14% Similarity=0.120 Sum_probs=111.1
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCC--ccc
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFS--RFN 90 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 90 (197)
+...+...|..|.+.|+.+.|+.. |..|+||+.|..|.+||.........+...+ ...+....|-|... .++
T Consensus 130 qr~~l~~kL~~H~GcVntV~FN~~--Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH----~~NvfQaKFiP~s~d~ti~ 203 (559)
T KOG1334|consen 130 QRLRLQKKLNKHKGCVNTVHFNQR--GDVLASGSDDLQVVVWDWVSGSPKLSFESGH----CNNVFQAKFIPFSGDRTIV 203 (559)
T ss_pred HHhhhhhcccCCCCccceeeeccc--CceeeccCccceEEeehhhccCccccccccc----ccchhhhhccCCCCCcCce
Confidence 344455678899999999999998 9999999999999999998776544333222 23344444555432 222
Q ss_pred ce-----eEEEE---------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce
Q psy13207 91 SI-----SIMYE---------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY 153 (197)
Q Consensus 91 ~~-----~~~~~---------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~ 153 (197)
++ +++=. ...+. .|...|..++.- +..+ .+++.|+.+.-+|+++.... ..+..-..+.
T Consensus 204 ~~s~dgqvr~s~i~~t~~~e~t~rl~-~h~g~vhklav~p~sp~~f--~S~geD~~v~~~Dlr~~~pa--~~~~cr~~~~ 278 (559)
T KOG1334|consen 204 TSSRDGQVRVSEILETGYVENTKRLA-PHEGPVHKLAVEPDSPKPF--LSCGEDAVVFHIDLRQDVPA--EKFVCREADE 278 (559)
T ss_pred eccccCceeeeeeccccceecceecc-cccCccceeeecCCCCCcc--cccccccceeeeeeccCCcc--ceeeeeccCC
Confidence 21 11111 33444 688888888876 6777 99999999999999873221 1121222233
Q ss_pred e---cEEEEEEccC-CCEEEEEeCCCcEEEEEcCCC
Q psy13207 154 C---TVWRVSWNIT-GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 154 ~---~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~ 185 (197)
. ..+.++..|. ..++++|+.|..+++||.+.-
T Consensus 279 ~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~ 314 (559)
T KOG1334|consen 279 KERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRI 314 (559)
T ss_pred ccceeeeeEecCCCCccccccCChhhhhhhhcccch
Confidence 3 5688999995 458999999999999998763
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-09 Score=82.89 Aligned_cols=150 Identities=15% Similarity=0.166 Sum_probs=101.8
Q ss_pred Ccccccccceeeeee------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 5 PLQSEKCLNQWTRRS------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
++..|-.+-+|+... .-.+|...|.++.|.|....+.++||..|..|+++|+...+.... .+ ....+
T Consensus 67 SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~---d~----~~~~~ 139 (758)
T KOG1310|consen 67 SGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGM---DH----GMEET 139 (758)
T ss_pred ecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccccccc---cc----Cccch
Confidence 456666778887642 235899999999999975467899999999999999986432110 00 00001
Q ss_pred eEEEccCCCcccceeEEEEeeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcc--cceeeee---eec
Q psy13207 79 CLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTR--FDIETIG---NFE 150 (197)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~--~~~~~~~---~~~ 150 (197)
.+... .|...|..|+-. |+.+ .++++||+++-+|++.... ....+.. .+.
T Consensus 140 -------------------~~~~~-cht~rVKria~~p~~Phtf--wsasEDGtirQyDiREph~c~p~~~~~~~l~ny~ 197 (758)
T KOG1310|consen 140 -------------------TRCWS-CHTDRVKRIATAPNGPHTF--WSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN 197 (758)
T ss_pred -------------------hhhhh-hhhhhhhheecCCCCCceE--EEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence 11112 677777777776 6777 9999999999999986311 1111111 111
Q ss_pred CceecEEEEEEccC-CCEEEEEeCCCcEEEEEcC
Q psy13207 151 DHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 151 ~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~ 183 (197)
...-...++..+|. ..+||.|+.|-..++||.+
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 22234578999994 6799999999999999954
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.4e-08 Score=70.79 Aligned_cols=157 Identities=14% Similarity=0.124 Sum_probs=109.6
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccceeEEEE---
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSISIMYE--- 97 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 97 (197)
..|..+|..+-|+-. .+.+++++.|..+.-.-.+.+..+..+........ ...+. .+|-.+...-...+++..
T Consensus 111 ~~h~~~v~~~if~~~--~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~-~~fvGd~~gqvt~lr~~~~~~ 187 (404)
T KOG1409|consen 111 LAHQARVSAIVFSLT--HEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL-YAFVGDHSGQITMLKLEQNGC 187 (404)
T ss_pred hhhhcceeeEEecCC--ceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE-EEEecccccceEEEEEeecCC
Confidence 368999999999987 78899999997776545556555443332211110 11111 333332222233334444
Q ss_pred --eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
+..+. +|...+.+++|.+...+|.+|..|..+.+||+... .....++.+|...|..+..-+--+.+.+++.||
T Consensus 188 ~~i~~~~-~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~----~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg 262 (404)
T KOG1409|consen 188 QLITTFN-GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR----KGTAYELQGHNDKVQALSYAQHTRQLISCGEDG 262 (404)
T ss_pred ceEEEEc-CcccceEEEEEcCCCcEEEeccccCceEEEeccCC----cceeeeeccchhhhhhhhhhhhheeeeeccCCC
Confidence 55666 89999999999955555599999999999999642 345567788999999999888888999999999
Q ss_pred cEEEEEcCCCc
Q psy13207 176 CVRLWKLKKKR 186 (197)
Q Consensus 176 ~i~iw~~~~~~ 186 (197)
.|.+|+++...
T Consensus 263 ~i~~w~mn~~r 273 (404)
T KOG1409|consen 263 GIVVWNMNVKR 273 (404)
T ss_pred eEEEEecccee
Confidence 99999998643
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.7e-08 Score=76.28 Aligned_cols=163 Identities=18% Similarity=0.135 Sum_probs=94.9
Q ss_pred cccceeeeee----eecCCCcceeEEEECCCCCCcEEEEE-eCCCcEEEE--EcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATC-AADGLVRIY--EAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~-~~dg~v~iw--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
.++.+|++.. .+....+....++|+|+ |+.|+.+ +.+|.+.|| |+.+++. ..+. .....+....|
T Consensus 228 ~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPD--G~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt-----~~~~~~~~~~w 299 (429)
T PRK01742 228 SQLVVHDLRSGARKVVASFRGHNGAPAFSPD--GSRLAFASSKDGVLNIYVMGANGGTP-SQLT-----SGAGNNTEPSW 299 (429)
T ss_pred cEEEEEeCCCCceEEEecCCCccCceeECCC--CCEEEEEEecCCcEEEEEEECCCCCe-Eeec-----cCCCCcCCEEE
Confidence 4567777542 12222233457899999 8877765 468877666 4444321 1111 12345678999
Q ss_pred ccCCCcccce------eEEEEee------EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 83 NHSFSRFNSI------SIMYEAH------SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 83 ~~~~~~~~~~------~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
+|+++.++.. ..+|++. ... .+.. ....|+|+.-.++..+.++ +.+||+.++ .......
T Consensus 300 SpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g-----~~~~lt~ 370 (429)
T PRK01742 300 SPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSG-----STEVLSS 370 (429)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCC-----CeEEecC
Confidence 9999976532 4666621 111 1222 3567884433336666665 455898752 2211111
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcC--CCcchhhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK--KKRKKKKE 191 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~--~~~~~~~~ 191 (197)
.+ ....+.|+|||++|+.++.++.+.+|.+. .++....+
T Consensus 371 ~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l 411 (429)
T PRK01742 371 TF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARL 411 (429)
T ss_pred CC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEc
Confidence 11 23567899999999999999998888763 34444444
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=91.46 Aligned_cols=162 Identities=11% Similarity=0.170 Sum_probs=111.9
Q ss_pred cccccccceeeeee-----ee-cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRRS-----NL-VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+.++.|.-.+ .+ .+-++.|+.+.|+.. |+.+..+..||.+.+|.+.. +..-.++. +......
T Consensus 2226 gs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~q--Gnk~~i~d~dg~l~l~q~~p-k~~~s~qc-----hnk~~~D 2297 (2439)
T KOG1064|consen 2226 GSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQ--GNKFGIVDGDGDLSLWQASP-KPYTSWQC-----HNKALSD 2297 (2439)
T ss_pred cCCCceEEEEeccCCCeEEEeeccCcchhhhhhhccc--CCceeeeccCCceeecccCC-cceecccc-----CCccccc
Confidence 57788888885321 11 123378999999998 99999999999999999872 21111111 1233444
Q ss_pred EEEccCCCcccc--------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 80 LTWNHSFSRFNS--------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 80 ~~~~~~~~~~~~--------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
..|-. ..+++ .+.+|| ...+...|...++++++.|+.-+|++|+++|.|++||++. .+.
T Consensus 2298 f~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rq-----rql 2370 (2439)
T KOG1064|consen 2298 FRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQ-----RQL 2370 (2439)
T ss_pred eeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHH-----HHH
Confidence 44433 11221 267888 1111138999999999998777779999999999999975 444
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
...++. ++ ...++++|+..|.++||++...+.+..++
T Consensus 2371 ~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2371 RHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred HHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 443332 44 67899999999999999999877666554
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-08 Score=77.36 Aligned_cols=157 Identities=9% Similarity=0.132 Sum_probs=112.6
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc------CCCeeeEEEccCCCcccce--
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC------PTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-- 92 (197)
|.-..+.++++..++. ..+|++|+.+|.|-.||.++......+.....+.. ...|+++.|+.+|-.++.+
T Consensus 171 ~~~~~~~lN~v~in~~--hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts 248 (703)
T KOG2321|consen 171 FETDSGELNVVSINEE--HGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTS 248 (703)
T ss_pred cccccccceeeeecCc--cceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeecc
Confidence 4456689999999998 77999999999999999998765554443333221 3458999999999888766
Q ss_pred ---eEEEEeeEec----ccC--CCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ---SIMYEAHSIN----AEH--KDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ---~~~~~~~~~~----~~~--~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+.+||++.-. ..| .-+|..+.|. .+.-. +.......++|||-.+ ++....+.. ...++.+|+
T Consensus 249 ~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~-v~S~Dk~~~kiWd~~~-----Gk~~asiEp-t~~lND~C~ 321 (703)
T KOG2321|consen 249 TGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNK-VVSMDKRILKIWDECT-----GKPMASIEP-TSDLNDFCF 321 (703)
T ss_pred CCcEEEEEcccCCceeecccCCccceeeecccccCCCce-EEecchHHhhhccccc-----CCceeeccc-cCCcCceee
Confidence 7899933221 133 4568888886 22220 3334456789999876 555555443 456899999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
-|++-+++++-.++.+..|=+...+
T Consensus 322 ~p~sGm~f~Ane~~~m~~yyiP~LG 346 (703)
T KOG2321|consen 322 VPGSGMFFTANESSKMHTYYIPSLG 346 (703)
T ss_pred ecCCceEEEecCCCcceeEEccccC
Confidence 9999999999888888887766554
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.3e-09 Score=74.59 Aligned_cols=135 Identities=10% Similarity=0.113 Sum_probs=87.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce----------eEEEE---eeEeccc
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI----------SIMYE---AHSINAE 104 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~~ 104 (197)
++.++++..||.+.+++.+.... ..+.++. ...-.+.+....+..+.++ .+.|+ +.++...
T Consensus 101 ~t~V~~~~~dg~~~v~s~~~~~~-----~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~ 175 (319)
T KOG4714|consen 101 DNRVCIGYADGSLAVFSTDKDLA-----LMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPS 175 (319)
T ss_pred CCceEecCCCceEEEEechHHHh-----hhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccc
Confidence 67899999999999999765321 1122211 1111222222233332221 23344 2222111
Q ss_pred C--CCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEE
Q psy13207 105 H--KDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVR 178 (197)
Q Consensus 105 ~--~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~ 178 (197)
+ ...|.+++-+ .+.+ ++|+.||.+-+||.++. ..+...+..|+.+|+.+.|+| ++..|.+++.||.+.
T Consensus 176 ~~~~~~v~~l~~hp~qq~~v--~cgt~dg~~~l~d~rn~----~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw 249 (319)
T KOG4714|consen 176 KKALDAVTALCSHPAQQHLV--CCGTDDGIVGLWDARNV----AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLW 249 (319)
T ss_pred ccccccchhhhCCcccccEE--EEecCCCeEEEEEcccc----cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEE
Confidence 1 2347777777 3344 77888999999999863 455667889999999999999 688999999999999
Q ss_pred EEEcCC
Q psy13207 179 LWKLKK 184 (197)
Q Consensus 179 iw~~~~ 184 (197)
.||..+
T Consensus 250 ~wdas~ 255 (319)
T KOG4714|consen 250 HWDAST 255 (319)
T ss_pred EEcCCC
Confidence 999874
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.7e-08 Score=79.56 Aligned_cols=175 Identities=14% Similarity=0.146 Sum_probs=111.5
Q ss_pred Ccccccccceeeeeeeec------------CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc---
Q psy13207 5 PLQSEKCLNQWTRRSNLV------------DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH--- 69 (197)
Q Consensus 5 ~~~~~~~~~~w~~~~~~~------------~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~--- 69 (197)
++..||+||+|+...... --.+++.++.+.+. ++.+|.++.||.|.+.++..-+.........
T Consensus 1066 sgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~--~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~ 1143 (1431)
T KOG1240|consen 1066 SGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN--GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIP 1143 (1431)
T ss_pred EecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC--CCeEEEEcCCCeEEEEEccccccccceeeeeecc
Confidence 367899999999864322 24567888888887 8899999999999999987632111111111
Q ss_pred eeccC-CCeeeEEEccCCCc--cc-----ceeEEEEeeE--------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEE
Q psy13207 70 EVACP-TLASCLTWNHSFSR--FN-----SISIMYEAHS--------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVT 133 (197)
Q Consensus 70 ~~~~~-~~~~~~~~~~~~~~--~~-----~~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~ 133 (197)
..... ..+..-+|...... ++ ..+..||... .+ ...+.|++++.++..-++++|+..|.+.+|
T Consensus 1144 n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~-~~hG~vTSi~idp~~~WlviGts~G~l~lW 1222 (1431)
T KOG1240|consen 1144 NLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ-LRHGLVTSIVIDPWCNWLVIGTSRGQLVLW 1222 (1431)
T ss_pred cccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC-ccccceeEEEecCCceEEEEecCCceEEEE
Confidence 11112 22333344332222 21 2267788221 22 234678999999555566999999999999
Q ss_pred EccCCcccceeeeeeec-CceecEEEEEEccC---CCEEEEEe--CCCcEEEEEcCCCcc
Q psy13207 134 RDVMGTRFDIETIGNFE-DHYCTVWRVSWNIT---GTIVASSG--DDGCVRLWKLKKKRK 187 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~---~~~l~~~~--~dg~i~iw~~~~~~~ 187 (197)
|+|- ..++..+. .+..++..+..+|- ....++++ ..+.|.+|++.++..
T Consensus 1223 DLRF-----~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1223 DLRF-----RVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred Eeec-----CceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc
Confidence 9985 44454433 34567888887773 24554444 578899999988753
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-08 Score=73.39 Aligned_cols=167 Identities=11% Similarity=0.121 Sum_probs=105.4
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc---------------ceec--------------cceec--cC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS---------------QWCL--------------QHEVA--CP 74 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~---------------~~~~--------------~~~~~--~~ 74 (197)
..|+.++|.+......+.....|.+|++|.+....... .+++ ...+. +.
T Consensus 85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt 164 (433)
T KOG1354|consen 85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT 164 (433)
T ss_pred hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence 47889999887435567777889999999986432111 0000 00000 14
Q ss_pred CCeeeEEEccCCCcccce----eEEEE---------eeEecccCC-----CceeEEEEcC-CCeEEEEeeCCCeEEEEEc
Q psy13207 75 TLASCLTWNHSFSRFNSI----SIMYE---------AHSINAEHK-----DLIHDVAYDY-YGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~-----~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~ 135 (197)
..+.++.++.+..++.++ |.+|. +..++ .++ .-|++..|+| +.-+|+-.++.|.|++.|+
T Consensus 165 yhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIK-P~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDm 243 (433)
T KOG1354|consen 165 YHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIK-PANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDM 243 (433)
T ss_pred eEeeeeeecCccceEeeccceeeeeccccccCCceeEEEcc-ccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeec
Confidence 567899999999888776 78888 33333 332 3477888882 3333488889999999999
Q ss_pred cCCc-ccceeeeee----------ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC-Ccchhhhhhh
Q psy13207 136 VMGT-RFDIETIGN----------FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK-KRKKKKEEEE 194 (197)
Q Consensus 136 ~~~~-~~~~~~~~~----------~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~ 194 (197)
+... +.....+.. +..--..|..+.|+++|+|+++-.. -+|++||++. .+.+.+++.+
T Consensus 244 R~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh 313 (433)
T KOG1354|consen 244 RQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVH 313 (433)
T ss_pred hhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeeh
Confidence 8421 000111111 1122346889999999999998764 5999999954 3444444433
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.3e-08 Score=69.98 Aligned_cols=156 Identities=16% Similarity=0.224 Sum_probs=109.3
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccceeEEE
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNSISIMY 96 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 96 (197)
..++||.+.|++...-|. ..-+++.+.|.++++|--++... .+ ..+.+ +.+++++.+.++...|..+....
T Consensus 18 ~~~eG~~d~vn~~~l~~~--e~gv~~~s~drtvrv~lkrds~q--~w---psI~~~mP~~~~~~~y~~e~~~L~vg~~ng 90 (404)
T KOG1409|consen 18 SKIEGSQDDVNAAILIPK--EEGVISVSEDRTVRVWLKRDSGQ--YW---PSIYHYMPSPCSAMEYVSESRRLYVGQDNG 90 (404)
T ss_pred hhhcCchhhhhhheeccC--CCCeEEccccceeeeEEeccccc--cC---chhhhhCCCCceEeeeeccceEEEEEEecc
Confidence 457899999999999887 67799999999999997554321 11 12222 67889999999998887764222
Q ss_pred E---------------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCC---------------------
Q psy13207 97 E---------------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMG--------------------- 138 (197)
Q Consensus 97 ~---------------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~--------------------- 138 (197)
. ++... .|...+..+.|+ +..+ ++++.|..+.---.+.+
T Consensus 91 tvtefs~sedfnkm~~~r~~~-~h~~~v~~~if~~~~e~V--~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~ 167 (404)
T KOG1409|consen 91 TVTEFALSEDFNKMTFLKDYL-AHQARVSAIVFSLTHEWV--LSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALY 167 (404)
T ss_pred eEEEEEhhhhhhhcchhhhhh-hhhcceeeEEecCCceeE--EEeccccceEEEeeccCCcccceEeeccCCCCceeeEE
Confidence 2 33333 677788888887 5555 66666655432111100
Q ss_pred ---------------cccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 139 ---------------TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 139 ---------------~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
......++..+.+|...+.+++|.|..+.|.+|+.|..+.+||+--
T Consensus 168 ~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg 228 (404)
T KOG1409|consen 168 AFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGG 228 (404)
T ss_pred EEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccC
Confidence 0011234556779999999999999999999999999999999854
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.3e-09 Score=78.47 Aligned_cols=149 Identities=19% Similarity=0.249 Sum_probs=110.0
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc------ccceeccceecc-CCCeeeEEEccCCCcccce-----eE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN------LSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
....++..|.+ ...+++++.|-.+++||.+.-.. +..+...+.... ...|++++|+.++.-+.++ |+
T Consensus 283 ~L~~Ia~~P~n-t~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IY 361 (559)
T KOG1334|consen 283 GLYTIAVDPRN-TNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIY 361 (559)
T ss_pred eeeeEecCCCC-ccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceE
Confidence 56788888873 45899999999999999875322 233332322222 5679999999776554433 55
Q ss_pred EEE------------------eeE-ecccCCC--ceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 95 MYE------------------AHS-INAEHKD--LIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 95 ~~~------------------~~~-~~~~~~~--~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
++. ++. ++ +|.. .|.++-|- .+++ ++|+.=|.|.+|+-.+ .+.+..+.
T Consensus 362 LF~~~~~~G~~p~~~s~~~~~~k~vYK-GHrN~~TVKgVNFfGPrsEyV--vSGSDCGhIFiW~K~t-----~eii~~Me 433 (559)
T KOG1334|consen 362 LFNKSMGDGSEPDPSSPREQYVKRVYK-GHRNSRTVKGVNFFGPRSEYV--VSGSDCGHIFIWDKKT-----GEIIRFME 433 (559)
T ss_pred EeccccccCCCCCCCcchhhccchhhc-ccccccccceeeeccCccceE--EecCccceEEEEecch-----hHHHHHhh
Confidence 555 222 45 6753 57788887 3455 8888889999999876 67777788
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
+...-|+|+.=+|--..||+++-|.-|+||-...
T Consensus 434 gDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 434 GDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred cccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 7777899999999999999999999999998744
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-06 Score=66.59 Aligned_cols=159 Identities=8% Similarity=-0.000 Sum_probs=95.6
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------e
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------S 93 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 93 (197)
++.........+.|+|+ |+++.+++.||.|.++|+.+.+.+.++. ......+++++++|++++.+ +
T Consensus 31 ~i~~~~~~h~~~~~s~D--gr~~yv~~rdg~vsviD~~~~~~v~~i~------~G~~~~~i~~s~DG~~~~v~n~~~~~v 102 (369)
T PF02239_consen 31 RIPTGGAPHAGLKFSPD--GRYLYVANRDGTVSVIDLATGKVVATIK------VGGNPRGIAVSPDGKYVYVANYEPGTV 102 (369)
T ss_dssp EEE-STTEEEEEE-TT---SSEEEEEETTSEEEEEETTSSSEEEEEE-------SSEEEEEEE--TTTEEEEEEEETTEE
T ss_pred EEcCCCCceeEEEecCC--CCEEEEEcCCCeEEEEECCcccEEEEEe------cCCCcceEEEcCCCCEEEEEecCCCce
Confidence 44443344455789999 9999999999999999999987554433 35567899999999998755 6
Q ss_pred EEEE------eeEeccc------CCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 94 IMYE------AHSINAE------HKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 94 ~~~~------~~~~~~~------~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
.++| ++.++.. ....+.+|..+ ....++++--+-+.|.+.|..... ......+. .........
T Consensus 103 ~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~---~~~~~~i~-~g~~~~D~~ 178 (369)
T PF02239_consen 103 SVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPK---NLKVTTIK-VGRFPHDGG 178 (369)
T ss_dssp EEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSS---CEEEEEEE---TTEEEEE
T ss_pred eEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccc---ccceeeec-ccccccccc
Confidence 7788 3333311 23356666666 322211444445888888875421 11122222 234567899
Q ss_pred EccCCCEEEEEe-CCCcEEEEEcCCCcchhh
Q psy13207 161 WNITGTIVASSG-DDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 161 ~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~~ 190 (197)
|+|+++|++.+. ....|-++|.++.+....
T Consensus 179 ~dpdgry~~va~~~sn~i~viD~~~~k~v~~ 209 (369)
T PF02239_consen 179 FDPDGRYFLVAANGSNKIAVIDTKTGKLVAL 209 (369)
T ss_dssp E-TTSSEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred cCcccceeeecccccceeEEEeeccceEEEE
Confidence 999999887754 566888999887765443
|
... |
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.6e-07 Score=68.72 Aligned_cols=144 Identities=18% Similarity=0.124 Sum_probs=85.6
Q ss_pred CCcceeEEEECCCCCCcEEEEE-eCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATC-AADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SI 94 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~-~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 94 (197)
....+....|+|+ |+.|+.. +.+| .|.+||+.+++..+ + ......+....|+|+++.++.. ..
T Consensus 241 ~~~~~~~~~~SPD--G~~La~~~~~~g~~~I~~~d~~tg~~~~-l-----t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~ 312 (429)
T PRK03629 241 FPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQIRQ-V-----TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQ 312 (429)
T ss_pred CCCCcCCeEECCC--CCEEEEEEcCCCCcEEEEEECCCCCEEE-c-----cCCCCCcCceEECCCCCEEEEEeCCCCCce
Confidence 3344567899999 8877644 4455 58888987764321 1 1113456789999999987532 24
Q ss_pred EEE-------eeEecccCCCceeEEEEcCCCeEEEEeeC-C--CeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 95 MYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSS-D--QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 95 ~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d--~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+|. ...+. .+........|+|+.-.++..+. + ..|.+||+.++ . ...+... .......|+||
T Consensus 313 Iy~~d~~~g~~~~lt-~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g-----~-~~~Lt~~-~~~~~p~~SpD 384 (429)
T PRK03629 313 VYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG-----G-VQVLTDT-FLDETPSIAPN 384 (429)
T ss_pred EEEEECCCCCeEEee-cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCC-----C-eEEeCCC-CCCCCceECCC
Confidence 553 22232 23334556788843322244433 2 45778888652 2 1222221 12346789999
Q ss_pred CCEEEEEeCCCc---EEEEEcC
Q psy13207 165 GTIVASSGDDGC---VRLWKLK 183 (197)
Q Consensus 165 ~~~l~~~~~dg~---i~iw~~~ 183 (197)
|++|+.++.++. +.++++.
T Consensus 385 G~~i~~~s~~~~~~~l~~~~~~ 406 (429)
T PRK03629 385 GTMVIYSSSQGMGSVLNLVSTD 406 (429)
T ss_pred CCEEEEEEcCCCceEEEEEECC
Confidence 999999988765 6667764
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-08 Score=73.72 Aligned_cols=128 Identities=16% Similarity=0.217 Sum_probs=90.5
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (197)
..+.|.++.|... +.+++.|+..|.|...|++....-..+. ...+
T Consensus 251 sksDVfAlQf~~s--~nLv~~GcRngeI~~iDLR~rnqG~~~~-------------------------------a~rl-- 295 (425)
T KOG2695|consen 251 SKSDVFALQFAGS--DNLVFNGCRNGEIFVIDLRCRNQGNGWC-------------------------------AQRL-- 295 (425)
T ss_pred cchhHHHHHhccc--CCeeEecccCCcEEEEEeeecccCCCcc-------------------------------eEEE--
Confidence 3457888888887 8899999999999999998653221111 1111
Q ss_pred cCCCceeEEE---EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE--EEEEccCCCEEEEEeCCCcEE
Q psy13207 104 EHKDLIHDVA---YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW--RVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 104 ~~~~~i~~~~---~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~--~~~~~p~~~~l~~~~~dg~i~ 178 (197)
-|.+.|+++. |+.+.+ ++.+.+|+|++||.+.-+ ....+.++.+|...-. -+.+.+....+++++.|...+
T Consensus 296 yh~Ssvtslq~Lq~s~q~L--maS~M~gkikLyD~R~~K--~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytR 371 (425)
T KOG2695|consen 296 YHDSSVTSLQILQFSQQKL--MASDMTGKIKLYDLRATK--CKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTR 371 (425)
T ss_pred EcCcchhhhhhhccccceE--eeccCcCceeEeeehhhh--cccceeeeecccccccccccccccccceEEEccCeeEEE
Confidence 3666776654 446677 899999999999998621 1234788888865332 244556677888899999999
Q ss_pred EEEcCCCcchhh
Q psy13207 179 LWKLKKKRKKKK 190 (197)
Q Consensus 179 iw~~~~~~~~~~ 190 (197)
||.++.+....+
T Consensus 372 iWsl~~ghLl~t 383 (425)
T KOG2695|consen 372 IWSLDSGHLLCT 383 (425)
T ss_pred EEecccCceeec
Confidence 999997655443
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.6e-08 Score=79.66 Aligned_cols=123 Identities=23% Similarity=0.344 Sum_probs=95.7
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
.+.+|..+|+.+.|+|.+ ...+++++.|-.+..||+++.... +.+
T Consensus 109 ~lhghsraitd~n~~~q~-pdVlatcsvdt~vh~wd~rSp~~p--------------~ys-------------------- 153 (1081)
T KOG0309|consen 109 VLHGHSRAITDINFNPQH-PDVLATCSVDTYVHAWDMRSPHRP--------------FYS-------------------- 153 (1081)
T ss_pred EEecCccceeccccCCCC-CcceeeccccccceeeeccCCCcc--------------eee--------------------
Confidence 367999999999999953 678999999999999999876421 111
Q ss_pred EecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCC
Q psy13207 100 SINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDG 175 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg 175 (197)
.. .-......++|+ |+.+ +.+..+.|++||.+-+ ..++..+++|...|+.++|.. ....+++++.||
T Consensus 154 -~~-~w~s~asqVkwnyk~p~vl---asshg~~i~vwd~r~g----s~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~ 224 (1081)
T KOG0309|consen 154 -TS-SWRSAASQVKWNYKDPNVL---ASSHGNDIFVWDLRKG----STPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDG 224 (1081)
T ss_pred -ee-cccccCceeeecccCcchh---hhccCCceEEEeccCC----CcceEEecccceeeehHHHhhhhhhhhcccCCCC
Confidence 11 234456778888 5554 4556678999999853 678888999999999999986 345788999999
Q ss_pred cEEEEEcCCCc
Q psy13207 176 CVRLWKLKKKR 186 (197)
Q Consensus 176 ~i~iw~~~~~~ 186 (197)
+|+.||..+..
T Consensus 225 tvkfw~y~kSt 235 (1081)
T KOG0309|consen 225 TVKFWDYSKST 235 (1081)
T ss_pred ceeeecccccc
Confidence 99999997654
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-08 Score=70.77 Aligned_cols=121 Identities=16% Similarity=0.148 Sum_probs=85.5
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
..+.|.-..+-..|+..+ .+++.+|+.|+.+..||++-++. +. | .
T Consensus 160 ~wk~He~E~Wta~f~~~~-pnlvytGgDD~~l~~~D~R~p~~---~i---------------~----------------~ 204 (339)
T KOG0280|consen 160 TWKVHEFEAWTAKFSDKE-PNLVYTGGDDGSLSCWDIRIPKT---FI---------------W----------------H 204 (339)
T ss_pred cccccceeeeeeecccCC-CceEEecCCCceEEEEEecCCcc---ee---------------e----------------e
Confidence 577899999999998753 67899999999999999984321 11 1 0
Q ss_pred EecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC--CCEEEEEeCC
Q psy13207 100 SINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT--GTIVASSGDD 174 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~d 174 (197)
... .|...|.+|.-+ |..+ +||+.|..|++||.|+. ++++..-. -.+.|+.+.++|. +++|+++.+.
T Consensus 205 n~k-vH~~GV~SI~ss~~~~~~I--~TGsYDe~i~~~DtRnm----~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~ 276 (339)
T KOG0280|consen 205 NSK-VHTSGVVSIYSSPPKPTYI--ATGSYDECIRVLDTRNM----GKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHN 276 (339)
T ss_pred cce-eeecceEEEecCCCCCceE--EEeccccceeeeehhcc----cCccccCc-cccceEEEEecchhhhHHHHHHHhc
Confidence 111 688888888887 4567 99999999999999863 44444332 2378999999994 3445554444
Q ss_pred CcEEEEEcCC
Q psy13207 175 GCVRLWKLKK 184 (197)
Q Consensus 175 g~i~iw~~~~ 184 (197)
-.+|-+...
T Consensus 277 -G~ki~~~~~ 285 (339)
T KOG0280|consen 277 -GAKILDSSD 285 (339)
T ss_pred -CceEEEecc
Confidence 345555443
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.1e-06 Score=66.61 Aligned_cols=150 Identities=14% Similarity=0.154 Sum_probs=90.2
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCC---CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAAD---GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+..+...+....|+|+ |+.|+..+.+ ..|.+|++.+++... + .. .........|+|+++.++..
T Consensus 194 l~~~~~~~~~p~wSpD--G~~la~~s~~~~~~~l~~~~l~~g~~~~-l---~~--~~g~~~~~~~SpDG~~la~~~~~~g 265 (430)
T PRK00178 194 LLQSREPILSPRWSPD--GKRIAYVSFEQKRPRIFVQNLDTGRREQ-I---TN--FEGLNGAPAWSPDGSKLAFVLSKDG 265 (430)
T ss_pred EecCCCceeeeeECCC--CCEEEEEEcCCCCCEEEEEECCCCCEEE-c---cC--CCCCcCCeEECCCCCEEEEEEccCC
Confidence 4556778899999999 8888776543 368889998764321 1 11 12334568999999987532
Q ss_pred ---eEEEE-----eeEecccCCCceeEEEEcC--CCeEEEEeeCCC--eEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ---SIMYE-----AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ---~~~~~-----~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+.+|+ ...+. .+........|++ +.+. ++...++ .|.++++.++. ...+ ...+ .......
T Consensus 266 ~~~Iy~~d~~~~~~~~lt-~~~~~~~~~~~spDg~~i~-f~s~~~g~~~iy~~d~~~g~---~~~l-t~~~--~~~~~~~ 337 (430)
T PRK00178 266 NPEIYVMDLASRQLSRVT-NHPAIDTEPFWGKDGRTLY-FTSDRGGKPQIYKVNVNGGR---AERV-TFVG--NYNARPR 337 (430)
T ss_pred CceEEEEECCCCCeEEcc-cCCCCcCCeEECCCCCEEE-EEECCCCCceEEEEECCCCC---EEEe-ecCC--CCccceE
Confidence 55566 33333 3444456678884 3442 2333344 46666665421 1111 1112 2234578
Q ss_pred EccCCCEEEEEeCC-C--cEEEEEcCCCc
Q psy13207 161 WNITGTIVASSGDD-G--CVRLWKLKKKR 186 (197)
Q Consensus 161 ~~p~~~~l~~~~~d-g--~i~iw~~~~~~ 186 (197)
|+|+|++++..+.+ + .|.++|+.+++
T Consensus 338 ~Spdg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 338 LSADGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred ECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence 99999999877643 3 47788887654
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.5e-07 Score=67.90 Aligned_cols=162 Identities=11% Similarity=0.175 Sum_probs=101.0
Q ss_pred CCCcccccccceeeeeee----ecC----CCcceeEEEECCCCCCc-E--EEEEeCCC---------cEEEEEcCCcccc
Q psy13207 3 PSPLQSEKCLNQWTRRSN----LVD----SRTSVTDVKFGPKQLGL-V--LATCAADG---------LVRIYEAPDVMNL 62 (197)
Q Consensus 3 ~~~~~~~~~~~~w~~~~~----~~~----h~~~v~~~~~~~~~~~~-~--l~s~~~dg---------~v~iw~~~~~~~~ 62 (197)
|..+..-..+|+|..-.. ..+ ....-..+.|++. |+ + |++..-|. ++++.+++....
T Consensus 187 Pe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~--gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~- 263 (566)
T KOG2315|consen 187 PEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKL--GTALLVLASTDVDKTNASYYGEQTLYLLATQGESV- 263 (566)
T ss_pred cCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccC--CceEEEEEEEeecCCCccccccceEEEEEecCceE-
Confidence 334455566777765411 000 1112334778876 43 2 23333333 566666652211
Q ss_pred cceeccceeccCCCeeeEEEccCCCcccce-------eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeC--
Q psy13207 63 SQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSS-- 126 (197)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~-- 126 (197)
...+....+|.++.|+|+++-++.. +.+|+ +..+. ..+=+++-|+ ++.+ +.++.
T Consensus 264 -----~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~---egpRN~~~fnp~g~ii--~lAGFGN 333 (566)
T KOG2315|consen 264 -----SVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFP---EGPRNTAFFNPHGNII--LLAGFGN 333 (566)
T ss_pred -----EEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCC---CCCccceEECCCCCEE--EEeecCC
Confidence 2233347899999999999887543 67787 22332 4455678888 6666 44443
Q ss_pred -CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC------CCcEEEEEcCC
Q psy13207 127 -DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD------DGCVRLWKLKK 184 (197)
Q Consensus 127 -d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~------dg~i~iw~~~~ 184 (197)
-|.|-+||+.+ .+++..+..-.. +-+.|+|||++|+|++. |+.++||++.-
T Consensus 334 L~G~mEvwDv~n-----~K~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 334 LPGDMEVWDVPN-----RKLIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred CCCceEEEeccc-----hhhccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecC
Confidence 48999999976 667777665443 44899999999999864 78899999864
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.6e-06 Score=67.43 Aligned_cols=158 Identities=9% Similarity=0.012 Sum_probs=93.1
Q ss_pred cccceeeeee----eecCCCcceeEEEECCCCCCcEE-EEEeCCCc--EEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVL-ATCAADGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..+.+|++.. .+..+.+.+.+..|+|+ |+.| ++.+.++. |.+||+.++.... +. ..........|
T Consensus 226 ~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPD--G~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt-----~~~~~~~~~~~ 297 (435)
T PRK05137 226 PRVYLLDLETGQRELVGNFPGMTFAPRFSPD--GRKVVMSLSQGGNTDIYTMDLRSGTTTR-LT-----DSPAIDTSPSY 297 (435)
T ss_pred CEEEEEECCCCcEEEeecCCCcccCcEECCC--CCEEEEEEecCCCceEEEEECCCCceEE-cc-----CCCCccCceeE
Confidence 4566666532 34556667888999999 8765 46666665 6666776654211 11 11234567899
Q ss_pred ccCCCcccce--------eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC---CeEEEEEccCCccccee
Q psy13207 83 NHSFSRFNSI--------SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD---QNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 83 ~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~ 144 (197)
+|+++.++.. +.+++ ...+. .+...+....|+ ++.+ +..+.+ ..|.+||....
T Consensus 298 spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt-~~~~~~~~~~~SpdG~~i--a~~~~~~~~~~i~~~d~~~~------ 368 (435)
T PRK05137 298 SPDGSQIVFESDRSGSPQLYVMNADGSNPRRIS-FGGGRYSTPVWSPRGDLI--AFTKQGGGQFSIGVMKPDGS------ 368 (435)
T ss_pred cCCCCEEEEEECCCCCCeEEEEECCCCCeEEee-cCCCcccCeEECCCCCEE--EEEEcCCCceEEEEEECCCC------
Confidence 9999987532 44555 23333 233445667888 4444 444332 36777887531
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEeCC------CcEEEEEcCCC
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDD------GCVRLWKLKKK 185 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~iw~~~~~ 185 (197)
....+.. ...+....|+|||++|+..+.+ ..+.++|+...
T Consensus 369 ~~~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~ 414 (435)
T PRK05137 369 GERILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR 414 (435)
T ss_pred ceEeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC
Confidence 1122221 2246778999999988776543 25777777554
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-06 Score=66.97 Aligned_cols=150 Identities=13% Similarity=0.141 Sum_probs=86.3
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeC-CC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAA-DG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~-dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+..+...+....|+|+ |+.|+..+. ++ .|.++|+.+++... .... ........|+|+++.++..
T Consensus 213 l~~~~~~~~~p~wSPD--G~~La~~s~~~g~~~L~~~dl~tg~~~~----lt~~--~g~~~~~~wSPDG~~La~~~~~~g 284 (448)
T PRK04792 213 LLRSPEPLMSPAWSPD--GRKLAYVSFENRKAEIFVQDIYTQVREK----VTSF--PGINGAPRFSPDGKKLALVLSKDG 284 (448)
T ss_pred eecCCCcccCceECCC--CCEEEEEEecCCCcEEEEEECCCCCeEE----ecCC--CCCcCCeeECCCCCEEEEEEeCCC
Confidence 3445567889999999 888876653 33 58888887764311 1111 2233468999999987543
Q ss_pred ---eEEEE-----eeEecccCCCceeEEEEcCC--CeEEEEeeCCCe--EEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ---SIMYE-----AHSINAEHKDLIHDVAYDYY--GLRMATCSSDQN--IKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ---~~~~~-----~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~--i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+.+++ +..+. .+.......+|+++ .+. ++...++. |.++|+.++. ...+ .+.+ ......+
T Consensus 285 ~~~Iy~~dl~tg~~~~lt-~~~~~~~~p~wSpDG~~I~-f~s~~~g~~~Iy~~dl~~g~---~~~L-t~~g--~~~~~~~ 356 (448)
T PRK04792 285 QPEIYVVDIATKALTRIT-RHRAIDTEPSWHPDGKSLI-FTSERGGKPQIYRVNLASGK---VSRL-TFEG--EQNLGGS 356 (448)
T ss_pred CeEEEEEECCCCCeEECc-cCCCCccceEECCCCCEEE-EEECCCCCceEEEEECCCCC---EEEE-ecCC--CCCcCee
Confidence 45555 33333 34445667889843 341 33333444 5555665421 1111 1222 2234578
Q ss_pred EccCCCEEEEEeC-CCc--EEEEEcCCCc
Q psy13207 161 WNITGTIVASSGD-DGC--VRLWKLKKKR 186 (197)
Q Consensus 161 ~~p~~~~l~~~~~-dg~--i~iw~~~~~~ 186 (197)
|+|||++|+..+. ++. |.++|+.+++
T Consensus 357 ~SpDG~~l~~~~~~~g~~~I~~~dl~~g~ 385 (448)
T PRK04792 357 ITPDGRSMIMVNRTNGKFNIARQDLETGA 385 (448)
T ss_pred ECCCCCEEEEEEecCCceEEEEEECCCCC
Confidence 9999998877664 444 4456666543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.7e-06 Score=66.14 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=89.7
Q ss_pred ccceeeeee----eecCCCcceeEEEECCCCCCcEEE-EEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEc
Q psy13207 11 CLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLA-TCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWN 83 (197)
Q Consensus 11 ~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (197)
.+.+|++.. .+..+.+...+.+|+|+ |+.|+ +.+.+| .|.+||+.+++... +. .........+|+
T Consensus 229 ~l~~~dl~~g~~~~l~~~~g~~~~~~~SpD--G~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt-----~~~~~~~~~~~s 300 (433)
T PRK04922 229 AIYVQDLATGQRELVASFRGINGAPSFSPD--GRRLALTLSRDGNPEIYVMDLGSRQLTR-LT-----NHFGIDTEPTWA 300 (433)
T ss_pred EEEEEECCCCCEEEeccCCCCccCceECCC--CCEEEEEEeCCCCceEEEEECCCCCeEE-Cc-----cCCCCccceEEC
Confidence 455555431 23344445567899999 87664 556665 58889987764221 11 112234578999
Q ss_pred cCCCcccce--------eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC---CeEEEEEccCCcccceee
Q psy13207 84 HSFSRFNSI--------SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD---QNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 84 ~~~~~~~~~--------~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~ 145 (197)
|+++.++.. +.+++ ...+. .+.......+|+ ++.+ +..+.+ ..|.+||+.++ ..
T Consensus 301 pDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt-~~g~~~~~~~~SpDG~~I--a~~~~~~~~~~I~v~d~~~g-----~~ 372 (433)
T PRK04922 301 PDGKSIYFTSDRGGRPQIYRVAASGGSAERLT-FQGNYNARASVSPDGKKI--AMVHGSGGQYRIAVMDLSTG-----SV 372 (433)
T ss_pred CCCCEEEEEECCCCCceEEEEECCCCCeEEee-cCCCCccCEEECCCCCEE--EEEECCCCceeEEEEECCCC-----Ce
Confidence 999987543 33333 22222 223334467888 4555 443332 36889998652 22
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCC---CcEEEEEcCC
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDD---GCVRLWKLKK 184 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~d---g~i~iw~~~~ 184 (197)
. .+. +........|+|||++++..+.+ +.+.++++..
T Consensus 373 ~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g 412 (433)
T PRK04922 373 R-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG 412 (433)
T ss_pred E-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 2 222 22234567999999988877653 3577777753
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.9e-07 Score=66.10 Aligned_cols=155 Identities=14% Similarity=0.172 Sum_probs=102.5
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce-------------eccCCCeeeEEEccCCCc--
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE-------------VACPTLASCLTWNHSFSR-- 88 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-- 88 (197)
-.+-|.++.|... |++||||..+|+|.++.-..... .++..... ++-...|..+.|.+++..
T Consensus 24 eadiis~vef~~~--Ge~LatGdkgGRVv~f~r~~~~~-~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~ 100 (433)
T KOG1354|consen 24 EADIISAVEFDHY--GERLATGDKGGRVVLFEREKLYK-GEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAE 100 (433)
T ss_pred hhcceeeEEeecc--cceEeecCCCCeEEEeecccccc-cceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccE
Confidence 3467899999998 99999999999999997544332 12222111 122567888999988764
Q ss_pred -ccce----eEEEE-----------------------------------------eeEecccCCCceeEEEEc-CCCeEE
Q psy13207 89 -FNSI----SIMYE-----------------------------------------AHSINAEHKDLIHDVAYD-YYGLRM 121 (197)
Q Consensus 89 -~~~~----~~~~~-----------------------------------------~~~~~~~~~~~i~~~~~~-~~~~~~ 121 (197)
+.++ +++|. .+.+..+|...|++|.++ ....
T Consensus 101 FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et-- 178 (433)
T KOG1354|consen 101 FLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKET-- 178 (433)
T ss_pred EEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccce--
Confidence 2222 67776 222233678889999998 3333
Q ss_pred EEeeCCCeEEEEEccCCcccceeeeeeecCc-----eecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCC
Q psy13207 122 ATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-----YCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.-...|-.|.+|.++-.. . .--+..++.+ ..-|++..|+|. -++++-++.-|+|++.|++..
T Consensus 179 ~lSADdLRINLWnlei~d-~-sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~ 246 (433)
T KOG1354|consen 179 FLSADDLRINLWNLEIID-Q-SFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQS 246 (433)
T ss_pred EeeccceeeeeccccccC-C-ceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhh
Confidence 345578899999986411 0 1111122222 356889999995 567777788999999999853
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.9e-07 Score=67.55 Aligned_cols=126 Identities=11% Similarity=0.047 Sum_probs=89.6
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
.++++.|-+......||+++.-+.+++||.+.++.. ...+.. ..+++++...|+++++.++ +..||
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP-----V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~ 278 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP-----VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRG 278 (412)
T ss_pred eeccceecCCCCCceEEEEecceeEEEecCcccCcc-----eeEeccccCcceeeeecCCCcEEEEecccchhheecccC
Confidence 456788877423567999999999999999876543 222222 6789999999999997665 56777
Q ss_pred ---e-eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 98 ---A-HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 98 ---~-~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+ ..+. +-...|++|..+|+.-++++|+-|..+||+|+++ ..++.... -...++++-+.++
T Consensus 279 ~kl~g~~~k-g~tGsirsih~hp~~~~las~GLDRyvRIhD~kt-----rkll~kvY-vKs~lt~il~~~~ 342 (412)
T KOG3881|consen 279 GKLLGCGLK-GITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT-----RKLLHKVY-VKSRLTFILLRDD 342 (412)
T ss_pred ceeeccccC-CccCCcceEEEcCCCceEEeeccceeEEEeeccc-----chhhhhhh-hhccccEEEecCC
Confidence 2 2244 5678899999997755559999999999999976 33332221 1345666777654
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=66.32 Aligned_cols=75 Identities=11% Similarity=0.132 Sum_probs=59.3
Q ss_pred cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
.....+.+.+++++.-.|+.|+.||.|.+||.... +..+....-....++|+|+|.++++|+.-|.+.+||+.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~-------~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG-------VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCC-------eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 46788999999955555599999999999998642 22222234456889999999999999999999999997
Q ss_pred CC
Q psy13207 184 KK 185 (197)
Q Consensus 184 ~~ 185 (197)
..
T Consensus 330 Ls 331 (545)
T PF11768_consen 330 LS 331 (545)
T ss_pred cC
Confidence 53
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=69.84 Aligned_cols=79 Identities=19% Similarity=0.397 Sum_probs=63.5
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (197)
+-||-+.+++++|+|| +++++|+..|..|++-.....-.+..|.
T Consensus 147 ~lGhvSml~dVavS~D--~~~IitaDRDEkIRvs~ypa~f~Iesfc---------------------------------- 190 (390)
T KOG3914|consen 147 ILGHVSMLLDVAVSPD--DQFIITADRDEKIRVSRYPATFVIESFC---------------------------------- 190 (390)
T ss_pred hhhhhhhhheeeecCC--CCEEEEecCCceEEEEecCcccchhhhc----------------------------------
Confidence 4589999999999999 9999999999999997665432222111
Q ss_pred ecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCc
Q psy13207 101 INAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
-+|...|..++.- .+.+ ++++.|+++++||+++++
T Consensus 191 --lGH~eFVS~isl~~~~~L--lS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 191 --LGHKEFVSTISLTDNYLL--LSGSGDKTLRLWDITSGK 226 (390)
T ss_pred --cccHhheeeeeeccCcee--eecCCCCcEEEEecccCC
Confidence 1899999999888 5555 999999999999998753
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.3e-07 Score=69.39 Aligned_cols=180 Identities=9% Similarity=0.076 Sum_probs=120.5
Q ss_pred cccccccceeeeee--------eecCCCcceeEEEECCCCCCcEEEEEeC-CCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 6 LQSEKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQLGLVLATCAA-DGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~~~~~l~s~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
..-|+.++.|.... .+..|...|..++.+.+ +.++.|.+. |..++++|+.+-..+...++.. .
T Consensus 26 ASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~d--g~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~------l 97 (558)
T KOG0882|consen 26 ASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYD--GWLFRSVEDPDHSVKVFDVENFDMINMIKLVD------L 97 (558)
T ss_pred eecchhhhhcCCCCccceeehhhhHHHHHHHHhhhcccc--ceeEeeccCcccceeEEEeeccchhhhccccc------C
Confidence 45678888887654 35678889999999998 989999877 9999999987654332222111 1
Q ss_pred eeeEEEc-cCCC---cccce------eEEEE-------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccC
Q psy13207 77 ASCLTWN-HSFS---RFNSI------SIMYE-------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 77 ~~~~~~~-~~~~---~~~~~------~~~~~-------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
...+.|. ..|. .++.+ +.++| ...+..-|.++|.++.++ ++.. ++....|.|.-|..+.
T Consensus 98 Pg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~--vSiD~~gmVEyWs~e~ 175 (558)
T KOG0882|consen 98 PGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA--VSIDISGMVEYWSAEG 175 (558)
T ss_pred CCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccce--eeccccceeEeecCCC
Confidence 1112221 1121 11111 46666 333344688999999998 6777 8888889999998762
Q ss_pred C-cccceeeee---------eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 138 G-TRFDIETIG---------NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 138 ~-~~~~~~~~~---------~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
. ...+..... .+.-.+....++.|+|+|..+.+-+.|..|+++++++++..+.+++..
T Consensus 176 ~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~ 243 (558)
T KOG0882|consen 176 PFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVL 243 (558)
T ss_pred cccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccc
Confidence 1 000111111 122234566899999999999999999999999999999888877643
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-06 Score=62.89 Aligned_cols=146 Identities=12% Similarity=0.161 Sum_probs=99.0
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc-----------------------------------------
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ----------------------------------------- 64 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~----------------------------------------- 64 (197)
-.+..++|+|. +++|+.|+.|+.+++.+--+-+...+
T Consensus 211 lG~k~v~wsP~--~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~ 288 (447)
T KOG4497|consen 211 LGLKFVEWSPC--NQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHI 288 (447)
T ss_pred cceeEEEeccc--cceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCc
Confidence 47899999998 99999999999999876543210000
Q ss_pred -------------------eeccceec-cCCCeeeEEEccCCCcccc-------eeEEEEeeEecc----cCCCceeEEE
Q psy13207 65 -------------------WCLQHEVA-CPTLASCLTWNHSFSRFNS-------ISIMYEAHSINA----EHKDLIHDVA 113 (197)
Q Consensus 65 -------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----~~~~~i~~~~ 113 (197)
.+.....+ .+..+.-++|++|..++++ ++.+||++.++- ....+|+...
T Consensus 289 ~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~ 368 (447)
T KOG4497|consen 289 WEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFE 368 (447)
T ss_pred cccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEE
Confidence 00000001 1345677899999888754 379999444430 3457899999
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEE
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~i 179 (197)
|+|..-+|+.+.....+++|.... ...+ ......-.|..+.|.-+|..++..+.|.....
T Consensus 369 WdP~~prL~vctg~srLY~W~psg-----~~~V-~vP~~GF~i~~l~W~~~g~~i~l~~kDafc~a 428 (447)
T KOG4497|consen 369 WDPGRPRLVVCTGKSRLYFWAPSG-----PRVV-GVPKKGFNIQKLQWLQPGEFIVLCGKDAFCVA 428 (447)
T ss_pred eCCCCceEEEEcCCceEEEEcCCC-----ceEE-ecCCCCceeeeEEecCCCcEEEEEcCCceEEE
Confidence 997666667787777899998752 2222 22223357899999999999999998865443
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-06 Score=66.78 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=88.4
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEe
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSI 101 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (197)
.+|.++|+++.++.+ -..|.|++.|+.+..|+....+..+.+.
T Consensus 99 ~~h~~~v~~~~~~~~--~~ciyS~~ad~~v~~~~~~~~~~~~~~~----------------------------------- 141 (541)
T KOG4547|consen 99 DKHYGNVNEILDAQR--LGCIYSVGADLKVVYILEKEKVIIRIWK----------------------------------- 141 (541)
T ss_pred CCCCCcceeeecccc--cCceEecCCceeEEEEecccceeeeeec-----------------------------------
Confidence 479999999999887 6789999999999999988765443332
Q ss_pred cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC-----CCEEEEEe-CCC
Q psy13207 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT-----GTIVASSG-DDG 175 (197)
Q Consensus 102 ~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-----~~~l~~~~-~dg 175 (197)
.....+..++.+|+.- ..+...+.|++||+++ .+.+..|.+|.++|.++.|--+ |.+++++. .+.
T Consensus 142 --~~~~~~~sl~is~D~~--~l~~as~~ik~~~~~~-----kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r 212 (541)
T KOG4547|consen 142 --EQKPLVSSLCISPDGK--ILLTASRQIKVLDIET-----KEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAER 212 (541)
T ss_pred --cCCCccceEEEcCCCC--EEEeccceEEEEEccC-----ceEEEEecCCCcceEEEEEEEeccccccceeeecccccc
Confidence 3344455666665533 2333346899999987 7899999999999999999876 66666654 566
Q ss_pred cEEEEEcCCC
Q psy13207 176 CVRLWKLKKK 185 (197)
Q Consensus 176 ~i~iw~~~~~ 185 (197)
-+.+|-+...
T Consensus 213 ~i~~w~v~~~ 222 (541)
T KOG4547|consen 213 GITVWVVEKE 222 (541)
T ss_pred ceeEEEEEcc
Confidence 6888877653
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.9e-07 Score=64.89 Aligned_cols=166 Identities=13% Similarity=0.166 Sum_probs=102.0
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc----------------------ccceec-----ccee-------
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN----------------------LSQWCL-----QHEV------- 71 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~----------------------~~~~~~-----~~~~------- 71 (197)
..|+.+.|-.+.....++..+.|.+|++|.+..... .+++.+ ...+
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 367888887653234566667899999998864310 000000 0000
Q ss_pred ----ccCCCeeeEEEccCCCcccce----eEEEE---------eeEecccCC-----CceeEEEEcC-CCeEEEEeeCCC
Q psy13207 72 ----ACPTLASCLTWNHSFSRFNSI----SIMYE---------AHSINAEHK-----DLIHDVAYDY-YGLRMATCSSDQ 128 (197)
Q Consensus 72 ----~~~~~~~~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~-----~~i~~~~~~~-~~~~~~s~~~d~ 128 (197)
.+...+.++.|+.+..++.++ |.+|. +..++ .|. .-|++..|+| ..-+|.-.+..|
T Consensus 166 vyaNaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiK-P~nmeeLteVItSaeFhp~~cn~fmYSsSkG 244 (460)
T COG5170 166 VYANAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIK-PHNMEELTEVITSAEFHPEMCNVFMYSSSKG 244 (460)
T ss_pred eccccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEecc-CccHHHHHHHHhhcccCHhHcceEEEecCCC
Confidence 013456788888888887766 77888 33444 443 3467788882 222336778889
Q ss_pred eEEEEEccCCc-ccceeeeee----------ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc-chhhhhh
Q psy13207 129 NIKVTRDVMGT-RFDIETIGN----------FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR-KKKKEEE 193 (197)
Q Consensus 129 ~i~~~d~~~~~-~~~~~~~~~----------~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~ 193 (197)
.|++-|+++.. +.....+.. +.+-...|..+.|+|+|+++++-.. -++++||++..+ ++++++-
T Consensus 245 ~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~ 320 (460)
T COG5170 245 EIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPM 320 (460)
T ss_pred cEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeech
Confidence 99999998421 000111111 1223457889999999999998765 599999998754 4555543
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.2e-06 Score=58.53 Aligned_cols=130 Identities=10% Similarity=0.012 Sum_probs=87.4
Q ss_pred CCcc--eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEe
Q psy13207 24 SRTS--VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSI 101 (197)
Q Consensus 24 h~~~--v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (197)
|... +..+..+++ +.++++.+....|..|.+...... . ++..
T Consensus 155 h~~~~~~ns~~~snd--~~~~~~Vgds~~Vf~y~id~~sey---~-------------------------------~~~~ 198 (344)
T KOG4532|consen 155 HNQNLTQNSLHYSND--PSWGSSVGDSRRVFRYAIDDESEY---I-------------------------------ENIY 198 (344)
T ss_pred eccccceeeeEEcCC--CceEEEecCCCcceEEEeCCccce---e-------------------------------eeeE
Confidence 4443 778888888 899999999999999988754211 0 0000
Q ss_pred cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC--CEEEEEeCCCcEEE
Q psy13207 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG--TIVASSGDDGCVRL 179 (197)
Q Consensus 102 ~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~l~~~~~dg~i~i 179 (197)
.......-.+..|+.+...||++..||.+.+||++.....-.....+-..|.+.+..+.|+|.| .+|.-.-.=+.+.+
T Consensus 199 ~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv 278 (344)
T KOG4532|consen 199 EAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHV 278 (344)
T ss_pred ecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEE
Confidence 0022334466778855555699999999999999863222122223334588999999999865 35555555678999
Q ss_pred EEcCCCcchh
Q psy13207 180 WKLKKKRKKK 189 (197)
Q Consensus 180 w~~~~~~~~~ 189 (197)
.|+++....+
T Consensus 279 ~D~R~~~~~q 288 (344)
T KOG4532|consen 279 VDTRNYVNHQ 288 (344)
T ss_pred EEcccCceee
Confidence 9999876443
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-07 Score=70.86 Aligned_cols=117 Identities=10% Similarity=0.183 Sum_probs=87.8
Q ss_pred ccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceeccCCCeeeEEE
Q psy13207 9 EKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 9 ~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (197)
...+++|++.. .+......|..++.+|. |..|+.++.|+.+..+|+.-.... ++.. .+...+++++|
T Consensus 586 q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~--GDnli~gs~d~k~~WfDldlsskPyk~lr-----~H~~avr~Va~ 658 (733)
T KOG0650|consen 586 QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPN--GDNLILGSYDKKMCWFDLDLSSKPYKTLR-----LHEKAVRSVAF 658 (733)
T ss_pred ccceEEEehhHHHHHHHHhcCCeeeeeeeecCC--CCeEEEecCCCeeEEEEcccCcchhHHhh-----hhhhhhhhhhh
Confidence 34566776543 34455678999999998 999999999999999999755322 1111 12567888899
Q ss_pred ccCCCcccce-----e-----EEEE----------eeEecccCCCc----eeEEEEcCCCeEEEEeeCCCeEEEE
Q psy13207 83 NHSFSRFNSI-----S-----IMYE----------AHSINAEHKDL----IHDVAYDYYGLRMATCSSDQNIKVT 133 (197)
Q Consensus 83 ~~~~~~~~~~-----~-----~~~~----------~~~~~~~~~~~----i~~~~~~~~~~~~~s~~~d~~i~~~ 133 (197)
++.-..++++ + ++|+ ++.+. +|... |..+.|+|..-+|++++.||+|++|
T Consensus 659 H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~-gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 659 HKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLR-GHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeecc-CceeecccceEeecccCCCceEEecCCCceEEee
Confidence 8888777665 2 4444 66677 77665 8899999888888999999999998
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.4e-06 Score=63.92 Aligned_cols=154 Identities=13% Similarity=0.082 Sum_probs=87.4
Q ss_pred ccceeeeee----eecCCCcceeEEEECCCCCCcEEE-EEeCCCcEEEEEcC--CcccccceeccceeccCCCeeeEEEc
Q psy13207 11 CLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLA-TCAADGLVRIYEAP--DVMNLSQWCLQHEVACPTLASCLTWN 83 (197)
Q Consensus 11 ~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (197)
.+.+|++.. .+....+.+.+..|+|+ |+.|+ +.+.+|...||.+. .+. ...+. ..........|+
T Consensus 221 ~I~~~dl~~g~~~~l~~~~g~~~~~~~SPD--G~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt-----~~~~~~~~~~wS 292 (427)
T PRK02889 221 VVYVHDLATGRRRVVANFKGSNSAPAWSPD--GRTLAVALSRDGNSQIYTVNADGSG-LRRLT-----QSSGIDTEPFFS 292 (427)
T ss_pred EEEEEECCCCCEEEeecCCCCccceEECCC--CCEEEEEEccCCCceEEEEECCCCC-cEECC-----CCCCCCcCeEEc
Confidence 455555532 23334455678999999 87665 67788887777654 322 11111 112234567899
Q ss_pred cCCCcccce------eEEEEe-------eEecccCCCceeEEEEc--CCCeEEEEeeCCC---eEEEEEccCCcccceee
Q psy13207 84 HSFSRFNSI------SIMYEA-------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQ---NIKVTRDVMGTRFDIET 145 (197)
Q Consensus 84 ~~~~~~~~~------~~~~~~-------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~---~i~~~d~~~~~~~~~~~ 145 (197)
|+|+.++.. ..+|.+ ..+. .........+|+ ++.+ +..+.++ .|.+||+.++ ..
T Consensus 293 pDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt-~~g~~~~~~~~SpDG~~I--a~~s~~~g~~~I~v~d~~~g-----~~ 364 (427)
T PRK02889 293 PDGRSIYFTSDRGGAPQIYRMPASGGAAQRVT-FTGSYNTSPRISPDGKLL--AYISRVGGAFKLYVQDLATG-----QV 364 (427)
T ss_pred CCCCEEEEEecCCCCcEEEEEECCCCceEEEe-cCCCCcCceEECCCCCEE--EEEEccCCcEEEEEEECCCC-----Ce
Confidence 999987532 345541 1121 122233456788 4445 5555443 6899998752 21
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCC-c--EEEEEc
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDG-C--VRLWKL 182 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-~--i~iw~~ 182 (197)
..+... .......|+|||++|+..+.++ . +.+.++
T Consensus 365 -~~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~ 402 (427)
T PRK02889 365 -TALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSS 402 (427)
T ss_pred -EEccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEEC
Confidence 122221 2346789999999988877543 3 444454
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.8e-05 Score=61.43 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=84.1
Q ss_pred CCcceeEEEECCCCCCcEEEEEe-C----CCcEEEEEcCCcc--cccceeccceeccC-CCeeeEEEccCCCcccce---
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCA-A----DGLVRIYEAPDVM--NLSQWCLQHEVACP-TLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~-~----dg~v~iw~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 92 (197)
..+.....+|+|+ |+.|+..+ . |..+.+|++..+. ..... .... ......+|+|+|+.++..
T Consensus 229 ~~g~~~~p~wSPD--G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~l-----t~~~~~~~~~p~wSPDG~~Laf~s~~ 301 (428)
T PRK01029 229 LQGNQLMPTFSPR--KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRL-----LNEAFGTQGNPSFSPDGTRLVFVSNK 301 (428)
T ss_pred CCCCccceEECCC--CCEEEEEECCCCCcceeEEEeecccCCCCcceEe-----ecCCCCCcCCeEECCCCCEEEEEECC
Confidence 3344556899999 87776544 2 3334446665421 11111 1111 234568999999976532
Q ss_pred ---eEEEE--e-------eEecccCCCceeEEEEcCCCeEEEEeeCC---CeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 93 ---SIMYE--A-------HSINAEHKDLIHDVAYDYYGLRMATCSSD---QNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 93 ---~~~~~--~-------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
..+|. + ..+. .+...+....|+|+.-.|+..+.+ ..|.+||+.++ +. ..+......+.
T Consensus 302 ~g~~~ly~~~~~~~g~~~~~lt-~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g-----~~-~~Lt~~~~~~~ 374 (428)
T PRK01029 302 DGRPRIYIMQIDPEGQSPRLLT-KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATG-----RD-YQLTTSPENKE 374 (428)
T ss_pred CCCceEEEEECcccccceEEec-cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCC-----Ce-EEccCCCCCcc
Confidence 24443 1 1222 233456778899443322544332 46889998752 22 22322233567
Q ss_pred EEEEccCCCEEEEEeC---CCcEEEEEcCCCcc
Q psy13207 158 RVSWNITGTIVASSGD---DGCVRLWKLKKKRK 187 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~---dg~i~iw~~~~~~~ 187 (197)
...|+|||++|+..+. ...|.++|+..++.
T Consensus 375 ~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~ 407 (428)
T PRK01029 375 SPSWAIDSLHLVYSAGNSNESELYLISLITKKT 407 (428)
T ss_pred ceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 7999999998875443 35688888876543
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.51 E-value=0.00012 Score=55.38 Aligned_cols=154 Identities=12% Similarity=0.131 Sum_probs=91.7
Q ss_pred cceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCccc-ccceeccceeccCCCeeeEEEccCCCcccce------eEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMN-LSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 97 (197)
....++.|+|+ ++++++.. ....|.+|++..... +.. .....++.......+.|+|+++++... +.+|+
T Consensus 144 ~h~H~v~~~pd--g~~v~v~dlG~D~v~~~~~~~~~~~l~~-~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~ 220 (345)
T PF10282_consen 144 PHPHQVVFSPD--GRFVYVPDLGADRVYVYDIDDDTGKLTP-VDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFD 220 (345)
T ss_dssp TCEEEEEE-TT--SSEEEEEETTTTEEEEEEE-TTS-TEEE-EEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred ccceeEEECCC--CCEEEEEecCCCEEEEEEEeCCCceEEE-eeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEe
Confidence 44678999998 88776653 445899999976542 211 111123346778999999999886332 55555
Q ss_pred ee----------Eec---ccC--CCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 98 AH----------SIN---AEH--KDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 98 ~~----------~~~---~~~--~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+. .+. ... ......|+++++. +++++.-..+.|-+|++..... ....+..+.........+++
T Consensus 221 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g-~l~~~~~~~~~G~~Pr~~~~ 299 (345)
T PF10282_consen 221 YDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATG-TLTLVQTVPTGGKFPRHFAF 299 (345)
T ss_dssp EETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTT-TEEEEEEEEESSSSEEEEEE
T ss_pred ecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCC-ceEEEEEEeCCCCCccEEEE
Confidence 11 111 111 1256788888333 2234444578999999943110 12333333333344689999
Q ss_pred ccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 162 NITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 162 ~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
+|+|++|+++. .++.|.+|+++
T Consensus 300 s~~g~~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 300 SPDGRYLYVANQDSNTVSVFDID 322 (345)
T ss_dssp -TTSSEEEEEETTTTEEEEEEEE
T ss_pred eCCCCEEEEEecCCCeEEEEEEe
Confidence 99999999887 56789999875
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.7e-07 Score=62.91 Aligned_cols=115 Identities=18% Similarity=0.239 Sum_probs=78.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEH 105 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (197)
..|.+++-+|.+ .+.+++|+.||.+.+||.+....+ ...+. .|
T Consensus 180 ~~v~~l~~hp~q-q~~v~cgt~dg~~~l~d~rn~~~p-----------------------------------~S~l~-ah 222 (319)
T KOG4714|consen 180 DAVTALCSHPAQ-QHLVCCGTDDGIVGLWDARNVAMP-----------------------------------VSLLK-AH 222 (319)
T ss_pred ccchhhhCCccc-ccEEEEecCCCeEEEEEcccccch-----------------------------------HHHHH-Hh
Confidence 459999999974 677889999999999999875322 11222 79
Q ss_pred CCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCC------------cccceeeeee-------ecCceecEEEEEEcc
Q psy13207 106 KDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMG------------TRFDIETIGN-------FEDHYCTVWRVSWNI 163 (197)
Q Consensus 106 ~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~------------~~~~~~~~~~-------~~~h~~~v~~~~~~p 163 (197)
+.++..+.|+ |+.+ +++++||.+-.||..+. ..+.+.++.. +..-...|+++..
T Consensus 223 k~~i~eV~FHpk~p~~L--ft~sedGslw~wdas~~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV-- 298 (319)
T KOG4714|consen 223 KAEIWEVHFHPKNPEHL--FTCSEDGSLWHWDASTTFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDV-- 298 (319)
T ss_pred hhhhhheeccCCCchhe--eEecCCCcEEEEcCCCceEEecCccccccccccCCcccceEeeeccccccceeeeeeec--
Confidence 9999999999 7778 99999999999998631 0001111111 1111123333333
Q ss_pred CCCEEEEEeCCCcEEEEE
Q psy13207 164 TGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~ 181 (197)
-|..|++|+.-+-|++++
T Consensus 299 ~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 299 LGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cCceEEeccccceEEEec
Confidence 478899999989998875
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=1e-05 Score=64.81 Aligned_cols=146 Identities=18% Similarity=0.184 Sum_probs=94.8
Q ss_pred ecCCCcceeEEEECCC-----------CCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCC---
Q psy13207 21 LVDSRTSVTDVKFGPK-----------QLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF--- 86 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~-----------~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 86 (197)
|..|.+.|....+.-+ ..|.+++|||.||+|.|-.+.+.+...++.. +.++.+++++|+-
T Consensus 54 ~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df------~rpiksial~Pd~~~~ 127 (846)
T KOG2066|consen 54 LGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYDF------KRPIKSIALHPDFSRQ 127 (846)
T ss_pred eccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEec------CCcceeEEeccchhhh
Confidence 4456666655444321 1389999999999999999988765543332 5688999999982
Q ss_pred --Ccccce----eEEEE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-
Q psy13207 87 --SRFNSI----SIMYE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED- 151 (197)
Q Consensus 87 --~~~~~~----~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~- 151 (197)
+.++++ +.++. -..+. .-.+.|.++.|.++++ |-++.+| |++||..+ .+.+..+..
T Consensus 128 ~sk~fv~GG~aglvL~er~wlgnk~~v~l~-~~eG~I~~i~W~g~lI--AWand~G-v~vyd~~~-----~~~l~~i~~p 198 (846)
T KOG2066|consen 128 QSKQFVSGGMAGLVLSERNWLGNKDSVVLS-EGEGPIHSIKWRGNLI--AWANDDG-VKVYDTPT-----RQRLTNIPPP 198 (846)
T ss_pred hhhheeecCcceEEEehhhhhcCccceeee-cCccceEEEEecCcEE--EEecCCC-cEEEeccc-----cceeeccCCC
Confidence 233332 44444 11233 4567899999999999 8877766 59999976 232322221
Q ss_pred c-----eecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 152 H-----YCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 152 h-----~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+ ..--..+.|.++.+ |+.| ...+|++..++
T Consensus 199 ~~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 199 SQSVRPELFPPHLHWQDEDR-LVIG-WGDSVKICSIK 233 (846)
T ss_pred CCCCCcccCCCceEecCCCe-EEEe-cCCeEEEEEEe
Confidence 1 11235688987665 4445 44589999887
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.7e-06 Score=68.60 Aligned_cols=150 Identities=13% Similarity=0.179 Sum_probs=107.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc---------cccceeccceecc-CCCeeeEEEccCCCcccce--
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM---------NLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 92 (197)
.....|++|+.+ ..++|+|+.||.+++..+.+.. ....+.+.+++++ ...|..+.|+...+.+.++
T Consensus 14 nvkL~c~~WNke--~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 14 NVKLHCAEWNKE--SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CceEEEEEEccc--CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 356889999998 8899999999999999886542 1223445566666 7889999999988887654
Q ss_pred ---eEEEEe-------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 93 ---SIMYEA-------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ---~~~~~~-------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
|.+|-+ ..++....+-|.+++|+ +..+ ...-.||.|.+=.++.+.-+ + ..+++ .....+.
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kI--cIvYeDGavIVGsvdGNRIw-g---KeLkg--~~l~hv~ 163 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKI--CIVYEDGAVIVGSVDGNRIW-G---KELKG--QLLAHVL 163 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEE--EEEEccCCEEEEeeccceec-c---hhcch--hecccee
Confidence 677872 22222456778999999 6666 88888988887666532111 1 11222 2335789
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|++|.+.++.+-.+|.+.++|...
T Consensus 164 ws~D~~~~Lf~~ange~hlydnqg 187 (1189)
T KOG2041|consen 164 WSEDLEQALFKKANGETHLYDNQG 187 (1189)
T ss_pred ecccHHHHHhhhcCCcEEEecccc
Confidence 999998888888899999998653
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00028 Score=53.29 Aligned_cols=155 Identities=12% Similarity=0.112 Sum_probs=96.6
Q ss_pred cceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCccccccee-cc-ce-------eccCCCeeeEEEccCCCcccce---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWC-LQ-HE-------VACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~-~~-~~-------~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
.....+.++|+ +++|+++. .+|.|.++++.....+.... .. .. .+......++.++|+++++...
T Consensus 87 ~~p~~i~~~~~--g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG 164 (345)
T PF10282_consen 87 SSPCHIAVDPD--GRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG 164 (345)
T ss_dssp SCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred CCcEEEEEecC--CCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence 34456889998 88888776 58999999998743322211 00 00 0114567899999999987654
Q ss_pred ---eEEEEe----------eEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeecC----c--
Q psy13207 93 ---SIMYEA----------HSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED----H-- 152 (197)
Q Consensus 93 ---~~~~~~----------~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~----h-- 152 (197)
+.+|++ ..+.......-+.++|+++ ..++++.-.++.|.++++..... ....+..... .
T Consensus 165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g-~~~~~~~~~~~~~~~~~ 243 (345)
T PF10282_consen 165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDG-SLTEIQTISTLPEGFTG 243 (345)
T ss_dssp TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTT-EEEEEEEEESCETTSCS
T ss_pred CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCC-ceeEEEEeeeccccccc
Confidence 666661 1222234567789999944 33336666789999999872110 1122222211 1
Q ss_pred eecEEEEEEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 153 YCTVWRVSWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
......++++|||++|+++. .+++|.+|+++
T Consensus 244 ~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 244 ENAPAEIAISPDGRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred cCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence 12578899999999887765 56789999994
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.9e-07 Score=70.14 Aligned_cols=164 Identities=15% Similarity=0.202 Sum_probs=100.6
Q ss_pred Ccccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec
Q psy13207 5 PLQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72 (197)
Q Consensus 5 ~~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 72 (197)
+..+|+++++|.+. .++..|..+|.++.|-.+ -+.++++ ||-|.+||.--++.+.+..-...-.
T Consensus 752 SASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~--lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~ 827 (1034)
T KOG4190|consen 752 SASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD--LRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEG 827 (1034)
T ss_pred eccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec--cceeeec--cCcceeecccccchhHhhhcCcccC
Confidence 46889999999865 246789999999999987 6667655 7999999987766554322111000
Q ss_pred cCCCeeeEEEccCCCcc-cc-----eeEEEE---------eeE--ecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEE
Q psy13207 73 CPTLASCLTWNHSFSRF-NS-----ISIMYE---------AHS--INAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVT 133 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~-----~~~~~~---------~~~--~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~ 133 (197)
....|.|+.- .+...+ +. .++++| ++. -+ +.+..+++++.. ++.+ +.+-..|.|.+.
T Consensus 828 a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaVa~~GN~l--Aa~LSnGci~~L 903 (1034)
T KOG4190|consen 828 AGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAVADKGNKL--AAALSNGCIAIL 903 (1034)
T ss_pred CCceeEeccc-CcchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEeccCcchh--hHHhcCCcEEEE
Confidence 0222333321 111112 21 256666 222 22 455678888887 7777 999999999999
Q ss_pred EccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEE-EEc
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL-WKL 182 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~i-w~~ 182 (197)
|.++ +..+..++.-......++ .|..+.|+....|.++.+ |..
T Consensus 904 DaR~-----G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWha 947 (1034)
T KOG4190|consen 904 DARN-----GKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHA 947 (1034)
T ss_pred ecCC-----CceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehh
Confidence 9988 455554443222332232 244455666666666666 644
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.1e-05 Score=58.14 Aligned_cols=157 Identities=11% Similarity=0.040 Sum_probs=86.2
Q ss_pred ecCCCcceeEEEECCCCCCcE--E-EEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccccee--
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLV--L-ATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSIS-- 93 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~--l-~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 93 (197)
+......+..-+|+|+ |+. + ++...+| .|.+.++.+++..+ + ..+ +.......|+|+|+.++...
T Consensus 180 lt~~~~~~~sP~wSPD--G~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-l---t~~--~g~~~~p~wSPDG~~Laf~s~~ 251 (428)
T PRK01029 180 LTQEHSLSITPTWMHI--GSGFPYLYVSYKLGVPKIFLGSLENPAGKK-I---LAL--QGNQLMPTFSPRKKLLAFISDR 251 (428)
T ss_pred cccCCCCcccceEccC--CCceEEEEEEccCCCceEEEEECCCCCceE-e---ecC--CCCccceEECCCCCEEEEEECC
Confidence 4445556778899999 754 2 2444444 56666777654321 1 111 23345689999999876432
Q ss_pred --------EEEEee--------EecccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecE
Q psy13207 94 --------IMYEAH--------SINAEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTV 156 (197)
Q Consensus 94 --------~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v 156 (197)
..|++. .+...........+|+|+.-.|+..+ .++...+|.+.... .......+..+...+
T Consensus 252 ~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~--~g~~~~~lt~~~~~~ 329 (428)
T PRK01029 252 YGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDP--EGQSPRLLTKKYRNS 329 (428)
T ss_pred CCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcc--cccceEEeccCCCCc
Confidence 224321 11101122345678884432224433 46655555442100 011223333344566
Q ss_pred EEEEEccCCCEEEEEeCC---CcEEEEEcCCCcc
Q psy13207 157 WRVSWNITGTIVASSGDD---GCVRLWKLKKKRK 187 (197)
Q Consensus 157 ~~~~~~p~~~~l~~~~~d---g~i~iw~~~~~~~ 187 (197)
....|+|||+.|+..+.+ ..|.+||+.+++.
T Consensus 330 ~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~ 363 (428)
T PRK01029 330 SCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD 363 (428)
T ss_pred cceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe
Confidence 789999999988876643 4689999877643
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.3e-05 Score=58.15 Aligned_cols=157 Identities=13% Similarity=0.087 Sum_probs=89.0
Q ss_pred cccceeeeee----eecCCCcceeEEEECCCCCCcEEE-EEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLA-TCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..+.+|++.. .+..+...+.++.|+|+ |+.|+ +.+.++ .|.+|++.++.... +. ..........|
T Consensus 214 ~~i~v~d~~~g~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~-----~~~~~~~~~~~ 285 (417)
T TIGR02800 214 PEIYVQDLATGQREKVASFPGMNGAPAFSPD--GSKLAVSLSKDGNPDIYVMDLDGKQLTR-LT-----NGPGIDTEPSW 285 (417)
T ss_pred cEEEEEECCCCCEEEeecCCCCccceEECCC--CCEEEEEECCCCCccEEEEECCCCCEEE-CC-----CCCCCCCCEEE
Confidence 3556666432 23445566778999998 87665 555554 58888887653211 11 11223346789
Q ss_pred ccCCCcccce--------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCC---eEEEEEccCCcccceeee
Q psy13207 83 NHSFSRFNSI--------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ---NIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 83 ~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~---~i~~~d~~~~~~~~~~~~ 146 (197)
+|+++.++.. +.+++ ...+. .+........|+++.-+++.++.++ .|.++|+.+. . .
T Consensus 286 s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~-~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~-----~-~ 358 (417)
T TIGR02800 286 SPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLT-FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG-----G-E 358 (417)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC-----C-e
Confidence 9999876532 34444 22233 3445566778884332236666554 6788887652 1 1
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCC---cEEEEEc
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDG---CVRLWKL 182 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg---~i~iw~~ 182 (197)
..+... .......|+|+|++|+..+.++ .+.+.+.
T Consensus 359 ~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 359 RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 122211 1234568999999888877654 3444443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00018 Score=52.78 Aligned_cols=177 Identities=10% Similarity=0.067 Sum_probs=107.5
Q ss_pred ccccccceeeeeee--------ecCCCcceeEEEECCCCCCcEEEEEeC---CCcEEEEEcCCc-ccccceeccceeccC
Q psy13207 7 QSEKCLNQWTRRSN--------LVDSRTSVTDVKFGPKQLGLVLATCAA---DGLVRIYEAPDV-MNLSQWCLQHEVACP 74 (197)
Q Consensus 7 ~~~~~~~~w~~~~~--------~~~h~~~v~~~~~~~~~~~~~l~s~~~---dg~v~iw~~~~~-~~~~~~~~~~~~~~~ 74 (197)
...+.+..|++... +..+.+.++-+.|+|+ ++.|.++.. +|.|.-|.+... ..+.... ...+ ..
T Consensus 13 ~~s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~--~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln-~~~~-~g 88 (346)
T COG2706 13 RESQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPD--QRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLN-RQTL-PG 88 (346)
T ss_pred cCCCceEEEEEeCcccccchhhhccccCCCceEEECCC--CCEEEEEEecCCcCcEEEEEEcCCCCeEEEee-cccc-CC
Confidence 34566778887732 3457788899999998 878877754 578888877642 1111111 1111 13
Q ss_pred CCeeeEEEccCCCcccce------eEEEE----------eeEecccCCCc----------eeEEEEcCCCeEEEEee-CC
Q psy13207 75 TLASCLTWNHSFSRFNSI------SIMYE----------AHSINAEHKDL----------IHDVAYDYYGLRMATCS-SD 127 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~------~~~~~----------~~~~~~~~~~~----------i~~~~~~~~~~~~~s~~-~d 127 (197)
.+...++.++++++++++ +.++. +..+ .|... +....+.|+.-+++++. ..
T Consensus 89 ~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~--~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~ 166 (346)
T COG2706 89 SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVV--KHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGT 166 (346)
T ss_pred CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeee--ecCCCCCCccccCCccceeeeCCCCCEEEEeecCC
Confidence 444789999999998665 45555 1111 23322 66666775442225544 34
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCC-cchhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKK-RKKKKE 191 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~-~~~~~~ 191 (197)
..|.+|++..+. +.......++ -...-..+.|+|++++....+ .+++|.+|.++.. +++..+
T Consensus 167 Dri~~y~~~dg~-L~~~~~~~v~-~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~l 230 (346)
T COG2706 167 DRIFLYDLDDGK-LTPADPAEVK-PGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEEL 230 (346)
T ss_pred ceEEEEEcccCc-cccccccccC-CCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEe
Confidence 678899986421 1111111122 234458899999999988877 5899999999874 444443
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.6e-05 Score=60.43 Aligned_cols=109 Identities=10% Similarity=0.053 Sum_probs=70.6
Q ss_pred CcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcC-
Q psy13207 39 GLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDY- 116 (197)
Q Consensus 39 ~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 116 (197)
++++ ++-..+|.|.+.|..+.+.+..+. ........+.|++
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~-------------------------------------~~~~~h~~~~~s~D 47 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIP-------------------------------------TGGAPHAGLKFSPD 47 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE--------------------------------------STTEEEEEE-TT-
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEc-------------------------------------CCCCceeEEEecCC
Confidence 4455 455678999999988765433221 1122223345553
Q ss_pred -CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcchhhhh
Q psy13207 117 -YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 117 -~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~ 192 (197)
+++ .+++.|+.|.++|+.+ .+.+..+.... ...+++++|||++++++. ..+.+.++|.++.+.++.++
T Consensus 48 gr~~--yv~~rdg~vsviD~~~-----~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~ 117 (369)
T PF02239_consen 48 GRYL--YVANRDGTVSVIDLAT-----GKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP 117 (369)
T ss_dssp SSEE--EEEETTSEEEEEETTS-----SSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred CCEE--EEEcCCCeEEEEECCc-----ccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence 334 6678999999999987 56677666533 357899999999998876 68999999999887766554
|
... |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.2e-06 Score=41.82 Aligned_cols=38 Identities=32% Similarity=0.615 Sum_probs=33.2
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
.+...+..|...|.+++|+|++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44556667888999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.7e-05 Score=63.95 Aligned_cols=153 Identities=12% Similarity=0.089 Sum_probs=95.9
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc---cee-------ccCCCeeeEEEccCCCcccce-----
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ---HEV-------ACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
-.+++|+|++ +..+++.+.++.|++||..++... .+.-. ... ..-.....++++|++..+..+
T Consensus 685 P~gVa~dp~~-g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~ 762 (1057)
T PLN02919 685 PWDVCFEPVN-EKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESS 762 (1057)
T ss_pred CeEEEEecCC-CeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCC
Confidence 3578999942 777788888899999998765321 11000 000 001345679999998854322
Q ss_pred -eEEEEeeE-----eccc---------------------CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 93 -SIMYEAHS-----INAE---------------------HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 93 -~~~~~~~~-----~~~~---------------------~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
+++|++.. +..+ .-....+++++++.-++++-..++.|++||..+. ..
T Consensus 763 ~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg-----~v 837 (1057)
T PLN02919 763 SIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATK-----RV 837 (1057)
T ss_pred eEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCC-----eE
Confidence 78887221 1000 0012357778733323377888999999998652 11
Q ss_pred eee-------------ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 146 IGN-------------FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 146 ~~~-------------~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
... ..+.......++++++|+++++-+.++.|++||+++++.
T Consensus 838 ~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 838 TTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 111 111223567899999999999999999999999988653
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.3e-06 Score=41.14 Aligned_cols=38 Identities=29% Similarity=0.530 Sum_probs=33.1
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEE
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~ 55 (197)
.....+..|...|.++.|++. +..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPD--GKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCC--CCEEEEecCCCeEEEcC
Confidence 344566789999999999998 88999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.8e-05 Score=63.07 Aligned_cols=147 Identities=15% Similarity=0.246 Sum_probs=97.6
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
.+..+|.||...|.-+.|+.. .+.|-|...+|-|.+|-+-.+.=..+. -.-..+..|.+++|+.+|..+...
T Consensus 62 smNQtLeGH~~sV~vvTWNe~--~QKLTtSDt~GlIiVWmlykgsW~EEM---iNnRnKSvV~SmsWn~dG~kIcIvYeD 136 (1189)
T KOG2041|consen 62 SMNQTLEGHNASVMVVTWNEN--NQKLTTSDTSGLIIVWMLYKGSWCEEM---INNRNKSVVVSMSWNLDGTKICIVYED 136 (1189)
T ss_pred chhhhhccCcceEEEEEeccc--cccccccCCCceEEEEeeecccHHHHH---hhCcCccEEEEEEEcCCCcEEEEEEcc
Confidence 445678999999999999997 889999999999999998765311110 011115668889999888775321
Q ss_pred ----------eEEEE----------------------------------------------ee----EecccCCCceeEE
Q psy13207 93 ----------SIMYE----------------------------------------------AH----SINAEHKDLIHDV 112 (197)
Q Consensus 93 ----------~~~~~----------------------------------------------~~----~~~~~~~~~i~~~ 112 (197)
-++|. .. .+. .....|-.+
T Consensus 137 GavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s-~~~~kia~i 215 (1189)
T KOG2041|consen 137 GAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFS-NFPTKIAEI 215 (1189)
T ss_pred CCEEEEeeccceecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeec-CCCccccce
Confidence 14443 00 011 122336667
Q ss_pred EEc--------CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 113 AYD--------YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 113 ~~~--------~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
.|. |+.-+|+.|-..|.+.+..-.+. ..++..-. .-.+....|+++|..||.++.|
T Consensus 216 ~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND----~~Pvv~dt--gm~~vgakWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 216 EWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEND----PEPVVVDT--GMKIVGAKWNHNGAVLAVCGND 279 (1189)
T ss_pred eeccCccccCCCCCCEEEEEEcCceehhhhhcCC----CCCeEEec--ccEeecceecCCCcEEEEccCc
Confidence 776 56667788988999888765431 22222211 2467889999999999998865
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=60.65 Aligned_cols=73 Identities=14% Similarity=0.116 Sum_probs=52.8
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEec
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSIN 102 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (197)
...+.|.|++++|+ .+.|+.|+.||.|++||...+... ..
T Consensus 257 pL~s~v~~ca~sp~--E~kLvlGC~DgSiiLyD~~~~~t~--~~------------------------------------ 296 (545)
T PF11768_consen 257 PLPSQVICCARSPS--EDKLVLGCEDGSIILYDTTRGVTL--LA------------------------------------ 296 (545)
T ss_pred ecCCcceEEecCcc--cceEEEEecCCeEEEEEcCCCeee--ee------------------------------------
Confidence 46778999999999 999999999999999998765211 00
Q ss_pred ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEcc
Q psy13207 103 AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 103 ~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 136 (197)
...-....++|+|+.-.|++|+..|.+.+||+.
T Consensus 297 -ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 297 -KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred -eecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 111223556666443334888888999999875
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00036 Score=54.32 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=77.6
Q ss_pred CCcceeEEEECCCCCCcEEE-EEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLA-TCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~-s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 92 (197)
..+.+....|+|+ |+.|+ +.+.+| .|.++|+.+++... +. ..........|+|+++.++..
T Consensus 241 ~~g~~~~~~~SpD--G~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt-----~~~~~~~~~~~spDg~~i~f~s~~~g~~~ 312 (430)
T PRK00178 241 FEGLNGAPAWSPD--GSKLAFVLSKDGNPEIYVMDLASRQLSR-VT-----NHPAIDTEPFWGKDGRTLYFTSDRGGKPQ 312 (430)
T ss_pred CCCCcCCeEECCC--CCEEEEEEccCCCceEEEEECCCCCeEE-cc-----cCCCCcCCeEECCCCCEEEEEECCCCCce
Confidence 3344567899999 87776 555555 57777887764221 11 112234567899999876432
Q ss_pred eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeC-CC--eEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSS-DQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 ~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+.+++ ...+. ..........|+ ++.+ +..+. ++ .|.++|+.++ .. ..+.. ........|+
T Consensus 313 iy~~d~~~g~~~~lt-~~~~~~~~~~~Spdg~~i--~~~~~~~~~~~l~~~dl~tg-----~~-~~lt~-~~~~~~p~~s 382 (430)
T PRK00178 313 IYKVNVNGGRAERVT-FVGNYNARPRLSADGKTL--VMVHRQDGNFHVAAQDLQRG-----SV-RILTD-TSLDESPSVA 382 (430)
T ss_pred EEEEECCCCCEEEee-cCCCCccceEECCCCCEE--EEEEccCCceEEEEEECCCC-----CE-EEccC-CCCCCCceEC
Confidence 34444 11121 111223345777 4444 44333 33 5778888652 11 11211 1122346899
Q ss_pred cCCCEEEEEeCC-C--cEEEEEcC
Q psy13207 163 ITGTIVASSGDD-G--CVRLWKLK 183 (197)
Q Consensus 163 p~~~~l~~~~~d-g--~i~iw~~~ 183 (197)
|||++++..+.+ | .+.+.++.
T Consensus 383 pdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 383 PNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CCCCEEEEEEecCCceEEEEEECC
Confidence 999988877643 3 35666664
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00021 Score=60.41 Aligned_cols=172 Identities=15% Similarity=0.226 Sum_probs=105.1
Q ss_pred ccccceeeeeeeecCCCccee----EEEECCCCCCcEEEEEeC---CCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 9 EKCLNQWTRRSNLVDSRTSVT----DVKFGPKQLGLVLATCAA---DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 9 ~~~~~~w~~~~~~~~h~~~v~----~~~~~~~~~~~~l~s~~~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
...+|+|+....|.....+|. +++|.|. |+++|+.-. ...|.+|.-+ +-.-.+|.+.. -.....+..+.
T Consensus 236 ~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPs--G~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~-~~~~~~v~~l~ 311 (928)
T PF04762_consen 236 RRVIRVYSREGELQSTSEPVDGLEGALSWRPS--GNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRF-DPEEEKVIELA 311 (928)
T ss_pred eeEEEEECCCceEEeccccCCCccCCccCCCC--CCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCC-CCCCceeeEEE
Confidence 356788887777766555554 6799998 999988854 3456666633 33333344322 11256789999
Q ss_pred EccCCCcccce----eEEEE--------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEc----cCCcc--
Q psy13207 82 WNHSFSRFNSI----SIMYE--------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRD----VMGTR-- 140 (197)
Q Consensus 82 ~~~~~~~~~~~----~~~~~--------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~----~~~~~-- 140 (197)
|++++..|+.. +.+|- ...+.-.....+..+.|+ +..+ ...+..+.+..++. ..+..
T Consensus 312 Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L--~v~t~~g~~~~~~~~~~v~~s~~~~ 389 (928)
T PF04762_consen 312 WNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRL--HVLTSNGQYEIYDFAWDVSRSPGSS 389 (928)
T ss_pred ECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEE--EEEecCCcEEEEEEEEEEEecCCCC
Confidence 99999998765 57777 223331223445569999 4445 55555455544332 11100
Q ss_pred -cceeeeee----------ec-------------CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 141 -FDIETIGN----------FE-------------DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 141 -~~~~~~~~----------~~-------------~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
.+...+.. ++ .-..+|.+++|++++..+++-..||++.+|......
T Consensus 390 ~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~ 459 (928)
T PF04762_consen 390 PNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKN 459 (928)
T ss_pred ccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCC
Confidence 00000111 11 124678999999998889999999999999865543
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.4e-05 Score=63.68 Aligned_cols=149 Identities=19% Similarity=0.311 Sum_probs=95.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc---ccce----eEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR---FNSI----SIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~ 97 (197)
.+++.++..+|. |+-+|.++.-|-+. -|+...-....+-...+ .-.+....|+|.... ++.. ..+|+
T Consensus 24 ~~~~~a~si~p~--grdi~lAsr~gl~i-~dld~p~~ppr~l~h~t---pw~vad~qws~h~a~~~wiVsts~qkaiiwn 97 (1081)
T KOG0309|consen 24 DGGFNAVSINPS--GRDIVLASRQGLYI-IDLDDPFTPPRWLHHIT---PWQVADVQWSPHPAKPYWIVSTSNQKAIIWN 97 (1081)
T ss_pred cCcccceeeccc--cchhhhhhhcCeEE-EeccCCCCCceeeeccC---cchhcceecccCCCCceeEEecCcchhhhhh
Confidence 467888999998 88899998877654 46654432222211111 123344455544322 1111 23444
Q ss_pred ---------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC
Q psy13207 98 ---------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG 165 (197)
Q Consensus 98 ---------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 165 (197)
-..+. +|...|+.+.|+ |+.+ ++|+-|..+..||+++. ..++..+..-...-..++|+-..
T Consensus 98 lA~ss~~aIef~lh-ghsraitd~n~~~q~pdVl--atcsvdt~vh~wd~rSp----~~p~ys~~~w~s~asqVkwnyk~ 170 (1081)
T KOG0309|consen 98 LAKSSSNAIEFVLH-GHSRAITDINFNPQHPDVL--ATCSVDTYVHAWDMRSP----HRPFYSTSSWRSAASQVKWNYKD 170 (1081)
T ss_pred hhcCCccceEEEEe-cCccceeccccCCCCCcce--eeccccccceeeeccCC----CcceeeeecccccCceeeecccC
Confidence 22334 899999999999 6777 99999999999999863 34454444434455789998744
Q ss_pred CEEEEEeCCCcEEEEEcCCCc
Q psy13207 166 TIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 166 ~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+.+.+....|++||.+.+.
T Consensus 171 p~vlasshg~~i~vwd~r~gs 191 (1081)
T KOG0309|consen 171 PNVLASSHGNDIFVWDLRKGS 191 (1081)
T ss_pred cchhhhccCCceEEEeccCCC
Confidence 445556678899999998764
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00044 Score=58.57 Aligned_cols=155 Identities=16% Similarity=0.194 Sum_probs=92.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-----------------------cccccee-----------ccce
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-----------------------MNLSQWC-----------LQHE 70 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-----------------------~~~~~~~-----------~~~~ 70 (197)
...|.|++|||| ++.|+....++++.+.+-.-. ++..+|. ...+
T Consensus 120 d~GI~a~~WSPD--~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~ 197 (928)
T PF04762_consen 120 DSGILAASWSPD--EELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT 197 (928)
T ss_pred cCcEEEEEECCC--cCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence 457999999999 999998888888887653210 0000000 0000
Q ss_pred ec--------cCCCeeeEEEccCCCcccce-----------eEEEE----eeEecccCCCceeEEEEcCCCeEEEEeeC-
Q psy13207 71 VA--------CPTLASCLTWNHSFSRFNSI-----------SIMYE----AHSINAEHKDLIHDVAYDYYGLRMATCSS- 126 (197)
Q Consensus 71 ~~--------~~~~~~~~~~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~- 126 (197)
.+ .+..-..++|..||.+++.. +++|+ +......-...-.+++|-|..-++++.-.
T Consensus 198 ~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~ 277 (928)
T PF04762_consen 198 VPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRL 277 (928)
T ss_pred CCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEc
Confidence 00 12245678999999998654 58888 22222122223346788743333377654
Q ss_pred --CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 127 --DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 127 --d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
...|.+|.... -.. ++....+......|..+.|++|+..||..-.|. |.+|-..+
T Consensus 278 ~~~~~VvFfErNG-Lrh-geF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N 334 (928)
T PF04762_consen 278 PDRHDVVFFERNG-LRH-GEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN 334 (928)
T ss_pred CCCcEEEEEecCC-cEe-eeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC
Confidence 34555665432 111 121112223456789999999999999987664 99997765
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00058 Score=52.27 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=82.4
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCC-cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeE
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADG-LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (197)
.+|...|.-..+..+ ++-++.|..|| .+-|+|..+++. +.
T Consensus 356 v~~~~~VrY~r~~~~--~e~~vigt~dgD~l~iyd~~~~e~-------------------------------------kr 396 (668)
T COG4946 356 VGKKGGVRYRRIQVD--PEGDVIGTNDGDKLGIYDKDGGEV-------------------------------------KR 396 (668)
T ss_pred cCCCCceEEEEEccC--CcceEEeccCCceEEEEecCCceE-------------------------------------EE
Confidence 467777888888777 66788888888 888888877642 12
Q ss_pred ecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC---
Q psy13207 101 INAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--- 175 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--- 175 (197)
+. ..-..|.++..++ ..+ +.+.....+-+.|+.+ +.....-+...+-|..++|+|+++++|-+=.+|
T Consensus 397 ~e-~~lg~I~av~vs~dGK~~--vvaNdr~el~vididn-----gnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~t 468 (668)
T COG4946 397 IE-KDLGNIEAVKVSPDGKKV--VVANDRFELWVIDIDN-----GNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYT 468 (668)
T ss_pred ee-CCccceEEEEEcCCCcEE--EEEcCceEEEEEEecC-----CCeeEecccccceeEEEEEcCCceeEEEecCcceee
Confidence 22 3345566666663 334 7777778888889877 333222233456799999999999999876554
Q ss_pred -cEEEEEcCCCcc
Q psy13207 176 -CVRLWKLKKKRK 187 (197)
Q Consensus 176 -~i~iw~~~~~~~ 187 (197)
.|+++|+..++.
T Consensus 469 q~Iklydm~~~Ki 481 (668)
T COG4946 469 QSIKLYDMDGGKI 481 (668)
T ss_pred eeEEEEecCCCeE
Confidence 589999987553
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0017 Score=47.92 Aligned_cols=150 Identities=13% Similarity=0.078 Sum_probs=95.5
Q ss_pred eeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc------cceeEEEE---
Q psy13207 28 VTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF------NSISIMYE--- 97 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--- 97 (197)
+....|.|+ +++|++++ .-..|.+|++..+...... ...++.......|.|+|++++. .+.+.+|+
T Consensus 147 ~H~a~~tP~--~~~l~v~DLG~Dri~~y~~~dg~L~~~~--~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 147 VHSANFTPD--GRYLVVPDLGTDRIFLYDLDDGKLTPAD--PAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred cceeeeCCC--CCEEEEeecCCceEEEEEcccCcccccc--ccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 788899999 98888875 2248899999966533221 2223446778999999999973 34466666
Q ss_pred ----eeEe------cccC--CCceeEEEEc--CCCeEEEEeeC-CCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 98 ----AHSI------NAEH--KDLIHDVAYD--YYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 98 ----~~~~------~~~~--~~~i~~~~~~--~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+..+ +... .....+|..+ ++++ .++.+ ...|-+|.+...... ...+.....+...-....++
T Consensus 223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFL--YasNRg~dsI~~f~V~~~~g~-L~~~~~~~teg~~PR~F~i~ 299 (346)
T COG2706 223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFL--YASNRGHDSIAVFSVDPDGGK-LELVGITPTEGQFPRDFNIN 299 (346)
T ss_pred CCceEEEeeeeccCccccCCCCceeEEEECCCCCEE--EEecCCCCeEEEEEEcCCCCE-EEEEEEeccCCcCCccceeC
Confidence 2222 2111 2345566666 4444 66654 357788877642211 22333334445556889999
Q ss_pred cCCCEEEEEeCC-CcEEEEEcCC
Q psy13207 163 ITGTIVASSGDD-GCVRLWKLKK 184 (197)
Q Consensus 163 p~~~~l~~~~~d-g~i~iw~~~~ 184 (197)
|.|++|+++..+ ..|.+|....
T Consensus 300 ~~g~~Liaa~q~sd~i~vf~~d~ 322 (346)
T COG2706 300 PSGRFLIAANQKSDNITVFERDK 322 (346)
T ss_pred CCCCEEEEEccCCCcEEEEEEcC
Confidence 999999988854 5688887653
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.3e-06 Score=59.43 Aligned_cols=85 Identities=12% Similarity=0.024 Sum_probs=63.9
Q ss_pred CCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEc
Q psy13207 106 KDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 106 ~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~ 182 (197)
.+.|.++.|+ .+.+ ..|++.|.|..+|++...+-++.+...+ .|...|+++..-. ++++|++.+.+|.|++||+
T Consensus 252 ksDVfAlQf~~s~nLv--~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~ 328 (425)
T KOG2695|consen 252 KSDVFALQFAGSDNLV--FNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDL 328 (425)
T ss_pred chhHHHHHhcccCCee--EecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeee
Confidence 4567888888 5666 8999999999999987432223344333 4788898887665 7889999999999999999
Q ss_pred CCCcc---hhhhhh
Q psy13207 183 KKKRK---KKKEEE 193 (197)
Q Consensus 183 ~~~~~---~~~~~~ 193 (197)
+.-++ +..++.
T Consensus 329 R~~K~~~~V~qYeG 342 (425)
T KOG2695|consen 329 RATKCKKSVMQYEG 342 (425)
T ss_pred hhhhcccceeeeec
Confidence 87665 444443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0017 Score=50.84 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=74.2
Q ss_pred ceeEEEECCCCCCcEEE-EEeCCCc--EEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eEE
Q psy13207 27 SVTDVKFGPKQLGLVLA-TCAADGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SIM 95 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~-s~~~dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 95 (197)
......|+|+ |+.|+ +.+.+|. |.++|+.+++... +. ..........|+|+++.++.. +.+
T Consensus 263 ~~~~~~wSPD--G~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt-----~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~ 334 (448)
T PRK04792 263 INGAPRFSPD--GKKLALVLSKDGQPEIYVVDIATKALTR-IT-----RHRAIDTEPSWHPDGKSLIFTSERGGKPQIYR 334 (448)
T ss_pred CcCCeeECCC--CCEEEEEEeCCCCeEEEEEECCCCCeEE-Cc-----cCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 3457899999 87665 4566775 6667776653211 11 112345678899999887532 333
Q ss_pred EE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCe--EEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 96 YE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQN--IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 96 ~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~--i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
++ ...+. .........+|+ ++.+. ++...++. |.++|+.++ . ...+... .......|+|||+
T Consensus 335 ~dl~~g~~~~Lt-~~g~~~~~~~~SpDG~~l~-~~~~~~g~~~I~~~dl~~g-----~-~~~lt~~-~~d~~ps~spdG~ 405 (448)
T PRK04792 335 VNLASGKVSRLT-FEGEQNLGGSITPDGRSMI-MVNRTNGKFNIARQDLETG-----A-MQVLTST-RLDESPSVAPNGT 405 (448)
T ss_pred EECCCCCEEEEe-cCCCCCcCeeECCCCCEEE-EEEecCCceEEEEEECCCC-----C-eEEccCC-CCCCCceECCCCC
Confidence 44 12221 122223446787 44442 22333443 445666542 1 1222211 1123458999999
Q ss_pred EEEEEeC-CCc--EEEEEcC
Q psy13207 167 IVASSGD-DGC--VRLWKLK 183 (197)
Q Consensus 167 ~l~~~~~-dg~--i~iw~~~ 183 (197)
+|+..+. ++. +.+++.+
T Consensus 406 ~I~~~~~~~g~~~l~~~~~~ 425 (448)
T PRK04792 406 MVIYSTTYQGKQVLAAVSID 425 (448)
T ss_pred EEEEEEecCCceEEEEEECC
Confidence 8877654 333 6666663
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.3e-05 Score=62.33 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=27.4
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..+..++++++|+.+|.|-.+|.|.+|.-+..
T Consensus 313 s~i~~fDiSsn~~alafgd~~g~v~~wa~~~~ 344 (1118)
T KOG1275|consen 313 SGISAFDISSNGDALAFGDHEGHVNLWADRPQ 344 (1118)
T ss_pred CcceeEEecCCCceEEEecccCcEeeecCCCC
Confidence 34788999999999999999999999974433
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0029 Score=49.15 Aligned_cols=141 Identities=9% Similarity=-0.045 Sum_probs=80.0
Q ss_pred ceeEEEECCCCCCcE-EEEEeC---CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eE
Q psy13207 27 SVTDVKFGPKQLGLV-LATCAA---DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SI 94 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~-l~s~~~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 94 (197)
.+....|+|+ |+. ++..+. +..|.++|+.+++...-. ..+.......|+|+|+.++.. +.
T Consensus 189 ~~~~p~wSpD--G~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt------~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 260 (419)
T PRK04043 189 LNIFPKWANK--EQTAFYYTSYGERKPTLYKYNLYTGKKEKIA------SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIY 260 (419)
T ss_pred CeEeEEECCC--CCcEEEEEEccCCCCEEEEEECCCCcEEEEe------cCCCcEEeeEECCCCCEEEEEEccCCCcEEE
Confidence 6778999999 864 554443 356888888776432111 113345567899999887533 45
Q ss_pred EEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCCC--eEEEEEccCCcccceeeeee-ecCceecEEEEEEccC
Q psy13207 95 MYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQ--NIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWNIT 164 (197)
Q Consensus 95 ~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~--~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~ 164 (197)
+++ ...+. .+........|+ ++.+.|.+ ...+ .|.+.|+.++ ..... ..+. ....|+||
T Consensus 261 ~~dl~~g~~~~LT-~~~~~d~~p~~SPDG~~I~F~S-dr~g~~~Iy~~dl~~g-----~~~rlt~~g~----~~~~~SPD 329 (419)
T PRK04043 261 LYDTNTKTLTQIT-NYPGIDVNGNFVEDDKRIVFVS-DRLGYPNIFMKKLNSG-----SVEQVVFHGK----NNSSVSTY 329 (419)
T ss_pred EEECCCCcEEEcc-cCCCccCccEECCCCCEEEEEE-CCCCCceEEEEECCCC-----CeEeCccCCC----cCceECCC
Confidence 555 33333 233223345788 44453333 2333 5666676542 21111 1121 12489999
Q ss_pred CCEEEEEeCC---------CcEEEEEcCCCc
Q psy13207 165 GTIVASSGDD---------GCVRLWKLKKKR 186 (197)
Q Consensus 165 ~~~l~~~~~d---------g~i~iw~~~~~~ 186 (197)
|++|+..+.. ..|.+.|+..+.
T Consensus 330 G~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~ 360 (419)
T PRK04043 330 KNYIVYSSRETNNEFGKNTFNLYLISTNSDY 360 (419)
T ss_pred CCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence 9988877654 256777776543
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.5e-05 Score=65.00 Aligned_cols=159 Identities=13% Similarity=0.094 Sum_probs=98.4
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 92 (197)
.|..|+..-+|++|+.. .++|+.|+..|.|+++++.++.....+.. +..+++.+.=+.+|..+.+.
T Consensus 1096 ~frd~~~~fTc~afs~~--~~hL~vG~~~Geik~~nv~sG~~e~s~nc-----H~SavT~vePs~dgs~~Ltsss~S~Pl 1168 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGG--TNHLAVGSHAGEIKIFNVSSGSMEESVNC-----HQSAVTLVEPSVDGSTQLTSSSSSSPL 1168 (1516)
T ss_pred hhhccccceeeEEeecC--CceEEeeeccceEEEEEccCccccccccc-----cccccccccccCCcceeeeeccccCch
Confidence 46678899999999998 89999999999999999998864433221 14566666666666664332
Q ss_pred eEEEEeeE-ecccCC-CceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 93 SIMYEAHS-INAEHK-DLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 93 ~~~~~~~~-~~~~~~-~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
..+|+... +...|. ..-.++.|+ .+.- +.|+.-....+||+.+....+. .+....+..-.-++..|+|+.+++
T Consensus 1169 saLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r--~~gt~~d~a~~YDvqT~~~l~t-ylt~~~~~~y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1169 SALWDASSTGGPRHSFDEDKAVKFSNSLQFR--ALGTEADDALLYDVQTCSPLQT-YLTDTVTSSYSNNLAHFSPCDTLI 1245 (1516)
T ss_pred HHHhccccccCccccccccceeehhhhHHHH--HhcccccceEEEecccCcHHHH-hcCcchhhhhhccccccCCCcceE
Confidence 35677222 221233 345778888 2222 3444446778999987432211 111111111122678889988877
Q ss_pred EEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 169 ASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+ .|| .+||++....+..+..
T Consensus 1246 l---ndG--vLWDvR~~~aIh~FD~ 1265 (1516)
T KOG1832|consen 1246 L---NDG--VLWDVRIPEAIHRFDQ 1265 (1516)
T ss_pred e---eCc--eeeeeccHHHHhhhhh
Confidence 5 344 4688887766665543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.9e-05 Score=57.06 Aligned_cols=78 Identities=13% Similarity=0.346 Sum_probs=63.2
Q ss_pred cCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC-CCEEEEEeCCCcEEEEE
Q psy13207 104 EHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT-GTIVASSGDDGCVRLWK 181 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~ 181 (197)
++...|+.++|+|..- ++..++.+..|++.|+++ ...+..+..+ ..+++++|..| ..++++|-..|.|.+||
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet-----~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD 264 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLET-----SCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYD 264 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEeccc-----ceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEE
Confidence 7788999999992221 237788999999999987 5667777776 78999999986 56888888999999999
Q ss_pred cCCCcc
Q psy13207 182 LKKKRK 187 (197)
Q Consensus 182 ~~~~~~ 187 (197)
++....
T Consensus 265 ~R~~~~ 270 (463)
T KOG1645|consen 265 MRQPEG 270 (463)
T ss_pred ccCCCc
Confidence 998653
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.9e-05 Score=61.35 Aligned_cols=78 Identities=17% Similarity=0.248 Sum_probs=62.4
Q ss_pred ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 108 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+.+++|+|..++|+.|-.-|.+.+|...+ .+.-.....|+.+|..+.|||+|..++++..-|.+.+|.+...++
T Consensus 61 hatSLCWHpe~~vLa~gwe~g~~~v~~~~~-----~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~ 135 (1416)
T KOG3617|consen 61 HATSLCWHPEEFVLAQGWEMGVSDVQKTNT-----TETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGE 135 (1416)
T ss_pred ehhhhccChHHHHHhhccccceeEEEecCC-----ceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccc
Confidence 345688887777778999999999998764 333344456899999999999999999999999999998876555
Q ss_pred hhh
Q psy13207 188 KKK 190 (197)
Q Consensus 188 ~~~ 190 (197)
++.
T Consensus 136 ~q~ 138 (1416)
T KOG3617|consen 136 IQT 138 (1416)
T ss_pred ccc
Confidence 443
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.6e-06 Score=64.86 Aligned_cols=150 Identities=11% Similarity=0.091 Sum_probs=98.1
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceeccCCCeeeEEEccC-CCcccce---------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVACPTLASCLTWNHS-FSRFNSI--------- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------- 92 (197)
....+.|+++..+.+...++.|..+|.|.+-.++....- .++. ......+++++|++- ...||++
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~t----p~~ar~Ct~lAwneLDtn~LAagldkhrnds~ 130 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVT----PGYARPCTSLAWNELDTNHLAAGLDKHRNDSS 130 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceec----ccccccccccccccccHHHHHhhhhhhcccCC
Confidence 345688888877643468899999999999988765322 1111 112568899999985 4456555
Q ss_pred eEEEEeeEe----------cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 SIMYEAHSI----------NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 ~~~~~~~~~----------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+.+||+... ..+......+++|.-+.-++++|.....+.++|++. .+.....-.+..+..+..+
T Consensus 131 ~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRq------s~~~~~svnTk~vqG~tVd 204 (783)
T KOG1008|consen 131 LKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQ------SLDSVSSVNTKYVQGITVD 204 (783)
T ss_pred ccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhh------hhhhhhhhhhhhcccceec
Confidence 699992222 111334456788872222237888888999999983 1111111224466778889
Q ss_pred c-CCCEEEEEeCCCcEEEEE-cCC
Q psy13207 163 I-TGTIVASSGDDGCVRLWK-LKK 184 (197)
Q Consensus 163 p-~~~~l~~~~~dg~i~iw~-~~~ 184 (197)
| .+.|+++.. ||.|-+|| .++
T Consensus 205 p~~~nY~cs~~-dg~iAiwD~~rn 227 (783)
T KOG1008|consen 205 PFSPNYFCSNS-DGDIAIWDTYRN 227 (783)
T ss_pred CCCCCceeccc-cCceeeccchhh
Confidence 9 788887766 99999999 444
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00074 Score=51.71 Aligned_cols=66 Identities=9% Similarity=0.072 Sum_probs=49.8
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
.+..--+.|.++..+|+ |.+++.+.....+.+.|+.+++... ... ....-|+...|+|+++++|-+
T Consensus 396 r~e~~lg~I~av~vs~d--GK~~vvaNdr~el~vididngnv~~----idk-S~~~lItdf~~~~nsr~iAYa 461 (668)
T COG4946 396 RIEKDLGNIEAVKVSPD--GKKVVVANDRFELWVIDIDNGNVRL----IDK-SEYGLITDFDWHPNSRWIAYA 461 (668)
T ss_pred EeeCCccceEEEEEcCC--CcEEEEEcCceEEEEEEecCCCeeE----ecc-cccceeEEEEEcCCceeEEEe
Confidence 34556678999999999 9999999888899999998876321 110 114568899999999988654
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00069 Score=48.17 Aligned_cols=153 Identities=10% Similarity=-0.014 Sum_probs=83.4
Q ss_pred eEEEECCCC---CCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc---ceeEEEE----e
Q psy13207 29 TDVKFGPKQ---LGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN---SISIMYE----A 98 (197)
Q Consensus 29 ~~~~~~~~~---~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~ 98 (197)
..+.|-|.. ...+||.|+.-|...+|...+.+......-.+ ...-.-+.-.+-....-.++ -.+++.+ .
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~s-nn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s 149 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVS-NNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDS 149 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcccceeeeccc-ccchhhhhhhcccccceeeccCCcceeEEEEecCc
Confidence 456676631 13578999999999999988654321111000 00000000000000000000 0122222 1
Q ss_pred eEecccCCCc--eeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee-eecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 99 HSINAEHKDL--IHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG-NFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 99 ~~~~~~~~~~--i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
.... .|... .+.++++++.-++++.++...|..|.++... ...+. ....-.+.-.+..|+.....+|++..||
T Consensus 150 ~~~~-~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~s---ey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg 225 (344)
T KOG4532|consen 150 NKFA-VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDES---EYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDG 225 (344)
T ss_pred ccce-eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCcc---ceeeeeEecccCCCceeeeeccCcceEEEEecCC
Confidence 1111 34443 6677777444334888888999999886421 11222 2222334457889999999999999999
Q ss_pred cEEEEEcCCCc
Q psy13207 176 CVRLWKLKKKR 186 (197)
Q Consensus 176 ~i~iw~~~~~~ 186 (197)
++.|||++...
T Consensus 226 ~~~I~DVR~~~ 236 (344)
T KOG4532|consen 226 TCAIYDVRNMA 236 (344)
T ss_pred cEEEEEecccc
Confidence 99999998754
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.002 Score=50.06 Aligned_cols=160 Identities=15% Similarity=0.163 Sum_probs=98.8
Q ss_pred CCcceeEEEECCCCCCcEEEE-----EeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-e-----
Q psy13207 24 SRTSVTDVKFGPKQLGLVLAT-----CAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-I----- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s-----~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----- 92 (197)
|...|..+.++|.+-...+|+ .+.-+.|+||.......-+... ...+- ...--.+.|++-+.-|.. +
T Consensus 164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a-~ksFF-kadkvqm~WN~~gt~LLvLastdVD 241 (566)
T KOG2315|consen 164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVA-NKSFF-KADKVQMKWNKLGTALLVLASTDVD 241 (566)
T ss_pred eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhh-hcccc-ccceeEEEeccCCceEEEEEEEeec
Confidence 677899999998511233443 3566789999876322110000 01110 112234556655543211 1
Q ss_pred -----------eEEEE----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceec
Q psy13207 93 -----------SIMYE----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCT 155 (197)
Q Consensus 93 -----------~~~~~----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~ 155 (197)
+.+++ -..++....++|.++.|+ +..+.++-|-.=-.+-+||++ +.++..+. .++
T Consensus 242 ktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr------~~~v~df~--egp 313 (566)
T KOG2315|consen 242 KTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR------GKPVFDFP--EGP 313 (566)
T ss_pred CCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC------CCEeEeCC--CCC
Confidence 23333 112221246889999999 555644556667889999987 56676664 456
Q ss_pred EEEEEEccCCCEEEEEeCC---CcEEEEEcCCCcchhhhhh
Q psy13207 156 VWRVSWNITGTIVASSGDD---GCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~ 193 (197)
=+++-|+|.|++++.++-+ |.+-+||+.+.+++..+..
T Consensus 314 RN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a 354 (566)
T KOG2315|consen 314 RNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA 354 (566)
T ss_pred ccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc
Confidence 6889999999999998864 8899999999777766543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00018 Score=52.13 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=98.3
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec-------------cceeccCCCeeeEEEccCCCc---
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL-------------QHEVACPTLASCLTWNHSFSR--- 88 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~--- 88 (197)
...|+++.|... |.+|++|...|+|.++.-.... -.+++. ...++-...|..+.|..++..
T Consensus 26 ad~ItaVefd~t--g~YlatGDkgGRVvlfer~~s~-~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 26 ADKITAVEFDET--GLYLATGDKGGRVVLFEREKSY-GCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred cceeeEEEeccc--cceEeecCCCceEEEeeccccc-ccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 457999999998 9999999999999999855432 111111 111111455777888765543
Q ss_pred ccce----eEEEE------------------------------------------------eeEecccCCCceeEEEEc-
Q psy13207 89 FNSI----SIMYE------------------------------------------------AHSINAEHKDLIHDVAYD- 115 (197)
Q Consensus 89 ~~~~----~~~~~------------------------------------------------~~~~~~~~~~~i~~~~~~- 115 (197)
|.++ +++|. .+.....|...|+++.|+
T Consensus 103 LlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~Ns 182 (460)
T COG5170 103 LLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNS 182 (460)
T ss_pred EEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecC
Confidence 3332 67776 111212577778899998
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-----eecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCC
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-----YCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.... +-...|-.|.+|.+.-... .--+..++.| ..-|++..|+|. ...+.-++..|.|++-|+++.
T Consensus 183 D~et--~lSaDdLrINLWnl~i~D~--sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~ 254 (460)
T COG5170 183 DKET--LLSADDLRINLWNLEIIDG--SFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQS 254 (460)
T ss_pred chhe--eeeccceeeeeccccccCC--ceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhh
Confidence 3334 4456788999998864210 1112223333 346788999995 456666777899999999853
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00012 Score=57.52 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=61.0
Q ss_pred CCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE-EEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 106 KDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW-RVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 106 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
...+.-+.|+|..-++|.+..+|.+.+..+. .+.+-.+.-|...+. +++|.|||+.||.|=.||+|++.|+.+
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n------~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~ 93 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN------WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEK 93 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec------cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccC
Confidence 3456778888544444999999998888775 455556655555665 999999999999999999999999998
Q ss_pred Ccchhh
Q psy13207 185 KRKKKK 190 (197)
Q Consensus 185 ~~~~~~ 190 (197)
+.....
T Consensus 94 ~~~l~~ 99 (665)
T KOG4640|consen 94 GGRLVS 99 (665)
T ss_pred CCceec
Confidence 775544
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00072 Score=54.74 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=83.3
Q ss_pred eeecCCCcceeEEEECCCC----------CCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc
Q psy13207 19 SNLVDSRTSVTDVKFGPKQ----------LGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR 88 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~----------~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (197)
..+.-|.+.|+.++|.|.+ ..-+||++...|+|.+||......+..
T Consensus 49 qsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~------------------------ 104 (1062)
T KOG1912|consen 49 QSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINW------------------------ 104 (1062)
T ss_pred hccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhh------------------------
Confidence 4567799999999998742 123578888899999999876543221
Q ss_pred ccceeEEEEeeEecccCCCceeEEEEc-----C-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 89 FNSISIMYEAHSINAEHKDLIHDVAYD-----Y-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
++ .|...+..++|- . +.+ +.-..-.++.+|+..+ ++.+-..........|+.+.
T Consensus 105 ------------l~-~~~~~~qdl~W~~~rd~Srd~L--laIh~ss~lvLwntdt-----G~k~Wk~~ys~~iLs~f~~D 164 (1062)
T KOG1912|consen 105 ------------LS-HSNDSVQDLCWVPARDDSRDVL--LAIHGSSTLVLWNTDT-----GEKFWKYDYSHEILSCFRVD 164 (1062)
T ss_pred ------------hc-CCCcchhheeeeeccCcchhee--EEecCCcEEEEEEccC-----CceeeccccCCcceeeeeeC
Confidence 11 455566666665 2 334 5556667899998877 56565555555677889999
Q ss_pred c-CCCEEEEEeCCCcEEEEEc
Q psy13207 163 I-TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 163 p-~~~~l~~~~~dg~i~iw~~ 182 (197)
| |.+.+..-+..|.+.+.+.
T Consensus 165 Pfd~rh~~~l~s~g~vl~~~~ 185 (1062)
T KOG1912|consen 165 PFDSRHFCVLGSKGFVLSCKD 185 (1062)
T ss_pred CCCcceEEEEccCceEEEEec
Confidence 9 6677777777788887765
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00072 Score=53.94 Aligned_cols=121 Identities=17% Similarity=0.133 Sum_probs=78.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (197)
|...|.--++... +.+++-|+.-|.+++|+-..+..+.. + ..
T Consensus 32 ~~~~v~lTc~dst--~~~l~~GsS~G~lyl~~R~~~~~~~~-~----------------------------------~~- 73 (726)
T KOG3621|consen 32 FPARVKLTCVDAT--EEYLAMGSSAGSVYLYNRHTGEMRKL-K----------------------------------NE- 73 (726)
T ss_pred CcceEEEEEeecC--CceEEEecccceEEEEecCchhhhcc-c----------------------------------cc-
Confidence 4445554555555 78999999999999999766532210 0 00
Q ss_pred cCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 104 EHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 104 ~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
+-...+..+..+ ..+. |.|+..|.|.++-+..........+..+ +.|...|++++|++|+..+++|...|.|.+-
T Consensus 74 ~~~~~~~~~~vs~~e~lv--Aagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~ 151 (726)
T KOG3621|consen 74 GATGITCVRSVSSVEYLV--AAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLT 151 (726)
T ss_pred CccceEEEEEecchhHhh--hhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEE
Confidence 111222233334 4444 7788889999988754211112222222 2378899999999999999999999999988
Q ss_pred EcCC
Q psy13207 181 KLKK 184 (197)
Q Consensus 181 ~~~~ 184 (197)
.++.
T Consensus 152 ~L~s 155 (726)
T KOG3621|consen 152 ELDS 155 (726)
T ss_pred Eech
Confidence 7765
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=54.83 Aligned_cols=77 Identities=13% Similarity=0.127 Sum_probs=58.8
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (197)
+..|...|.+++|+|.+ ..++..++.+.+|+|.|+.+......+.
T Consensus 189 lp~~g~~IrdlafSp~~-~GLl~~asl~nkiki~dlet~~~vssy~---------------------------------- 233 (463)
T KOG1645|consen 189 LPGEGSFIRDLAFSPFN-EGLLGLASLGNKIKIMDLETSCVVSSYI---------------------------------- 233 (463)
T ss_pred ccccchhhhhhccCccc-cceeeeeccCceEEEEecccceeeehee----------------------------------
Confidence 55788899999999983 2278889999999999998864332221
Q ss_pred ecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCC
Q psy13207 101 INAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~ 138 (197)
.+ ..+.+++|. .+.+ ..|-..|.|.+||++..
T Consensus 234 ---a~-~~~wSC~wDlde~h~I--YaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 234 ---AY-NQIWSCCWDLDERHVI--YAGLQNGMVLVYDMRQP 268 (463)
T ss_pred ---cc-CCceeeeeccCCccee--EEeccCceEEEEEccCC
Confidence 33 667778887 4455 88889999999999864
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.004 Score=45.68 Aligned_cols=151 Identities=14% Similarity=0.171 Sum_probs=87.6
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEe-----CCCcEEEEEcC-CcccccceeccceeccCCCeeeEEEccCCCcccce-
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCA-----ADGLVRIYEAP-DVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~-----~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 92 (197)
.|.+|. .|+|+ |++|++.- ..|.|-+||.. +-+.+.+|.. +.-....+.+.|+++.|+.+
T Consensus 51 HFyGHg------~fs~d--G~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s-----~GIGPHel~l~pDG~tLvVAN 117 (305)
T PF07433_consen 51 HFYGHG------VFSPD--GRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPS-----HGIGPHELLLMPDGETLVVAN 117 (305)
T ss_pred EEecCE------EEcCC--CCEEEEeccccCCCcEEEEEEECcCCcEEEeEecC-----CCcChhhEEEcCCCCEEEEEc
Confidence 356663 68998 99988873 45899999998 3222222221 13455678889999776544
Q ss_pred --e--------------------EEEE--------eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCe-------EEEEE
Q psy13207 93 --S--------------------IMYE--------AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQN-------IKVTR 134 (197)
Q Consensus 93 --~--------------------~~~~--------~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~-------i~~~d 134 (197)
| ...| ...+. .-|...|+.+++.++...++.+-..+. +-+++
T Consensus 118 GGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~ 197 (305)
T PF07433_consen 118 GGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR 197 (305)
T ss_pred CCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc
Confidence 1 1121 22231 135566777777744441222222211 22333
Q ss_pred ccCCcccceeeeeee-------cCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcchhh
Q psy13207 135 DVMGTRFDIETIGNF-------EDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~~ 190 (197)
.. ..+..+ ..-...+-+|++++++.+++.+| ..+.+.+||..++.....
T Consensus 198 ~g-------~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~ 254 (305)
T PF07433_consen 198 RG-------GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGS 254 (305)
T ss_pred CC-------CcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeec
Confidence 21 111111 12246789999999998775554 788999999988765443
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00048 Score=55.66 Aligned_cols=131 Identities=17% Similarity=0.277 Sum_probs=86.2
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (197)
|...-.++.|+|. | +||-|+. ..|.+-|..+-+.++.... ++..|+.+.|.|....
T Consensus 14 ~~sN~~A~Dw~~~--G-LiAygsh-slV~VVDs~s~q~iqsie~-----h~s~V~~VrWap~~~p--------------- 69 (1062)
T KOG1912|consen 14 SRSNRNAADWSPS--G-LIAYGSH-SLVSVVDSRSLQLIQSIEL-----HQSAVTSVRWAPAPSP--------------- 69 (1062)
T ss_pred CcccccccccCcc--c-eEEEecC-ceEEEEehhhhhhhhcccc-----CccceeEEEeccCCCc---------------
Confidence 3344678899996 5 6777664 4777888776544332221 1456677777664421
Q ss_pred cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC---C-CEEEEEeCCCcEEE
Q psy13207 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT---G-TIVASSGDDGCVRL 179 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~-~~l~~~~~dg~i~i 179 (197)
..... - ....++++++...|.|.+||... ...+..+..|..++..++|-|. . .+|+.-..-.++-+
T Consensus 70 --~~llS-~--~~~~lliAsaD~~GrIil~d~~~-----~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvL 139 (1062)
T KOG1912|consen 70 --RDLLS-P--SSSQLLIASADISGRIILVDFVL-----ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVL 139 (1062)
T ss_pred --hhccC-c--cccceeEEeccccCcEEEEEehh-----hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEE
Confidence 11000 0 01345558888889999999976 5556667778889999999873 3 46666666789999
Q ss_pred EEcCCCcch
Q psy13207 180 WKLKKKRKK 188 (197)
Q Consensus 180 w~~~~~~~~ 188 (197)
|+..+++++
T Consensus 140 wntdtG~k~ 148 (1062)
T KOG1912|consen 140 WNTDTGEKF 148 (1062)
T ss_pred EEccCCcee
Confidence 999988763
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0053 Score=47.89 Aligned_cols=135 Identities=18% Similarity=0.130 Sum_probs=73.1
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE-
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE- 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~- 97 (197)
...-....+.++|+ |+.++. +.||...|+.....+... ........|.+.+++.+. .+.++.
T Consensus 30 ~~~~~p~~ls~npn--gr~v~V-~g~geY~iyt~~~~r~k~----------~G~g~~~vw~~~n~yAv~~~~~~I~I~kn 96 (443)
T PF04053_consen 30 SCEIYPQSLSHNPN--GRFVLV-CGDGEYEIYTALAWRNKA----------FGSGLSFVWSSRNRYAVLESSSTIKIYKN 96 (443)
T ss_dssp E-SS--SEEEE-TT--SSEEEE-EETTEEEEEETTTTEEEE----------EEE-SEEEE-TSSEEEEE-TTS-EEEEET
T ss_pred CCCcCCeeEEECCC--CCEEEE-EcCCEEEEEEccCCcccc----------cCceeEEEEecCccEEEEECCCeEEEEEc
Confidence 34445788999998 887777 567888888844332211 234567888886664321 256654
Q ss_pred e-----eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 98 A-----HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 ~-----~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
. ..+. . ...+..|- .+..+ ...+ ++.|.+||..+ .+.+..+... +|..+.|+++|++++..+
T Consensus 97 ~~~~~~k~i~-~-~~~~~~If-~G~LL--~~~~-~~~i~~yDw~~-----~~~i~~i~v~--~vk~V~Ws~~g~~val~t 163 (443)
T PF04053_consen 97 FKNEVVKSIK-L-PFSVEKIF-GGNLL--GVKS-SDFICFYDWET-----GKLIRRIDVS--AVKYVIWSDDGELVALVT 163 (443)
T ss_dssp TEE-TT-------SS-EEEEE--SSSE--EEEE-TTEEEEE-TTT-------EEEEESS---E-EEEEE-TTSSEEEEE-
T ss_pred CccccceEEc-C-CcccceEE-cCcEE--EEEC-CCCEEEEEhhH-----cceeeEEecC--CCcEEEEECCCCEEEEEe
Confidence 1 1122 0 11122221 15555 4444 44899999976 6777777643 489999999999999998
Q ss_pred CCCcEEEEEcCC
Q psy13207 173 DDGCVRLWKLKK 184 (197)
Q Consensus 173 ~dg~i~iw~~~~ 184 (197)
.+ ++.+++.+.
T Consensus 164 ~~-~i~il~~~~ 174 (443)
T PF04053_consen 164 KD-SIYILKYNL 174 (443)
T ss_dssp S--SEEEEEE-H
T ss_pred CC-eEEEEEecc
Confidence 55 888887654
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0027 Score=47.84 Aligned_cols=59 Identities=5% Similarity=0.021 Sum_probs=46.2
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~~~ 192 (197)
+.|.++|..+ .+.+..+.. ...+..++++||++ +|++.. .++.|.++|..+.+.+..+.
T Consensus 279 ~~V~ViD~~t-----~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 279 RFLFVVDAKT-----GKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred CEEEEEECCC-----CeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 5789999877 566665543 34789999999999 777666 67889999999988777663
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00037 Score=36.15 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=28.7
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
...|..++|+|...+||.++.+|.|.++.++-
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~ 42 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLNW 42 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence 34689999999999999999999999999843
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.01 Score=42.64 Aligned_cols=136 Identities=13% Similarity=0.134 Sum_probs=82.3
Q ss_pred EEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccce-----eEEEE-----e
Q psy13207 31 VKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNSI-----SIMYE-----A 98 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~-----~ 98 (197)
+..+.+ |+.||. -+|..|-|...++.=....-+ ..++. .-.-.-++|+||+..|+.+ +++|| +
T Consensus 3 ~~~~~~--Gk~lAi-~qd~~iEiRsa~Ddf~si~~k--cqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l 77 (282)
T PF15492_consen 3 LALSSD--GKLLAI-LQDQCIEIRSAKDDFSSIIGK--CQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL 77 (282)
T ss_pred eeecCC--CcEEEE-EeccEEEEEeccCCchheeEE--EecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee
Confidence 445666 876665 477888888776542111000 11111 3346789999999998755 88898 3
Q ss_pred eEeccc------CCCceeEEEEc--------CCCeEEEEeeCCCeEEEEEccC--CcccceeeeeeecCc-eecEEEEEE
Q psy13207 99 HSINAE------HKDLIHDVAYD--------YYGLRMATCSSDQNIKVTRDVM--GTRFDIETIGNFEDH-YCTVWRVSW 161 (197)
Q Consensus 99 ~~~~~~------~~~~i~~~~~~--------~~~~~~~s~~~d~~i~~~d~~~--~~~~~~~~~~~~~~h-~~~v~~~~~ 161 (197)
..++.. ....|..+.|. ...+ +.-..+|.++-|-+.. .+.....-...+..| ...|.++.+
T Consensus 78 f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~EL--lvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy 155 (282)
T PF15492_consen 78 FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYEL--LVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVY 155 (282)
T ss_pred EEcCcccccCCccccceeeeEeeccccccccceeE--EEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEE
Confidence 333311 23456666675 1234 6677788887665532 222323333444443 678999999
Q ss_pred ccCCCEEEEEeC
Q psy13207 162 NITGTIVASSGD 173 (197)
Q Consensus 162 ~p~~~~l~~~~~ 173 (197)
+|..++|+.|+.
T Consensus 156 ~p~h~LLlVgG~ 167 (282)
T PF15492_consen 156 HPKHRLLLVGGC 167 (282)
T ss_pred cCCCCEEEEecc
Confidence 999888887764
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0064 Score=51.68 Aligned_cols=99 Identities=15% Similarity=0.225 Sum_probs=62.0
Q ss_pred eEEEECCCCCCcEEEEE-----eCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce--------eE
Q psy13207 29 TDVKFGPKQLGLVLATC-----AADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI--------SI 94 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~-----~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~ 94 (197)
..+.|--+ |+++|+. ...+.+++||-. +.. ...-+. ..--.+++|.|.|..+++. +.
T Consensus 199 ~~IsWRgD--g~~fAVs~~~~~~~~RkirV~drE-g~L------ns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~Iv 269 (1265)
T KOG1920|consen 199 TSISWRGD--GEYFAVSFVESETGTRKIRVYDRE-GAL------NSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIV 269 (1265)
T ss_pred ceEEEccC--CcEEEEEEEeccCCceeEEEeccc-chh------hcccCcccccccceeecCCCCeEeeeeecCCCCcEE
Confidence 35789888 9998873 333799999976 211 111111 3345789999999887654 56
Q ss_pred EEE---ee------EecccCCCceeEEEEc--CCCeEEEEeeCCC-eEEEEEccC
Q psy13207 95 MYE---AH------SINAEHKDLIHDVAYD--YYGLRMATCSSDQ-NIKVTRDVM 137 (197)
Q Consensus 95 ~~~---~~------~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~-~i~~~d~~~ 137 (197)
+|. +. .++ .....+..++|+ ++.+...++...+ .|++|-..+
T Consensus 270 ffErNGL~hg~f~l~~p-~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 270 FFERNGLRHGEFVLPFP-LDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred EEecCCccccccccCCc-ccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 666 11 111 223348999999 6666333344444 599999876
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.40 E-value=7.7e-05 Score=58.76 Aligned_cols=153 Identities=10% Similarity=0.084 Sum_probs=90.9
Q ss_pred cCCCcceeEEEECCCCCCcEEEEE----eCCCcEEEEEcCCcc--cccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATC----AADGLVRIYEAPDVM--NLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~----~~dg~v~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
.+|..+.++++|++- +.+.||.| -.|-.+.|||+.+.- ....+.... .......+++|..+.+.+.++
T Consensus 99 p~~ar~Ct~lAwneL-Dtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~--~~l~gqns~cwlrd~klvlaGm~s 175 (783)
T KOG1008|consen 99 PGYARPCTSLAWNEL-DTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSS--STLDGQNSVCWLRDTKLVLAGMTS 175 (783)
T ss_pred ccccccccccccccc-cHHHHHhhhhhhcccCCccceecccccCCCcccccccc--ccccCccccccccCcchhhccccc
Confidence 467789999999985 25667766 356789999998762 211222221 113345588888887777665
Q ss_pred --eEEEEeeEe----cccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEE-ccCCcccceeeeeeecCc----eecEEE
Q psy13207 93 --SIMYEAHSI----NAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTR-DVMGTRFDIETIGNFEDH----YCTVWR 158 (197)
Q Consensus 93 --~~~~~~~~~----~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d-~~~~~~~~~~~~~~~~~h----~~~v~~ 158 (197)
+.++|++.- ..-....+..+... ++++ ++- .|+.|-+|| .+.. ..++..+... ...+..
T Consensus 176 r~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~--cs~-~dg~iAiwD~~rni----enpl~~i~~~~N~~~~~l~~ 248 (783)
T KOG1008|consen 176 RSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYF--CSN-SDGDIAIWDTYRNI----ENPLQIILRNENKKPKQLFA 248 (783)
T ss_pred chhhhhhhhhhhhhhhhhhhhhcccceecCCCCCce--ecc-ccCceeeccchhhh----ccHHHHHhhCCCCcccceee
Confidence 455552210 00123344445444 6777 544 599999999 3331 1222222221 235899
Q ss_pred EEEccCC-CEEEEEe-CCCcEEEEEcCC
Q psy13207 159 VSWNITG-TIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 159 ~~~~p~~-~~l~~~~-~dg~i~iw~~~~ 184 (197)
++|+|.. ..+++.+ ..++|+++|+..
T Consensus 249 ~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 249 LAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred EEeccCCcchhhhhccCcceEEEecccc
Confidence 9999942 3455555 457899998864
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.023 Score=44.16 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=90.6
Q ss_pred cceeEEEECCCCCCcEEEE-----EeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc---------
Q psy13207 26 TSVTDVKFGPKQLGLVLAT-----CAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS--------- 91 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s-----~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (197)
..|....|+|.+.+..|+. .+.+++++||.+.....+.+-.+. +..-..+.|.+.|+++..
T Consensus 174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf-----k~~~~qLkW~~~g~~ll~l~~t~~ksn 248 (561)
T COG5354 174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF-----KVSGVQLKWQVLGKYLLVLVMTHTKSN 248 (561)
T ss_pred cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE-----eecccEEEEecCCceEEEEEEEeeecc
Confidence 4678888999733444443 367889999998865544332221 112235667777766421
Q ss_pred -------eeEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 92 -------ISIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 92 -------~~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
.+.+++ +.... ...+.|...+|. ++.+.+++|-.+-.+.++|++. .....+. .+.=+
T Consensus 249 KsyfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~------Nl~~~~P--e~~rN 319 (561)
T COG5354 249 KSYFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG------NLRFYFP--EQKRN 319 (561)
T ss_pred cceeccceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeeccccc------ceEEecC--Ccccc
Confidence 245555 22222 346789999997 6677556666888999999984 3333332 22335
Q ss_pred EEEEccCCCEEEEEeCC---CcEEEEEcCCC
Q psy13207 158 RVSWNITGTIVASSGDD---GCVRLWKLKKK 185 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~d---g~i~iw~~~~~ 185 (197)
.+.|+|.+++++.++-| |.+-+||....
T Consensus 320 T~~fsp~~r~il~agF~nl~gni~i~~~~~r 350 (561)
T COG5354 320 TIFFSPHERYILFAGFDNLQGNIEIFDPAGR 350 (561)
T ss_pred cccccCcccEEEEecCCccccceEEeccCCc
Confidence 57788888888776654 66777777653
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0013 Score=34.10 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=28.3
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP 57 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 57 (197)
...|.++.|+|. ..+||.+..+|.|.++.++
T Consensus 11 ~~~v~~~~w~P~--mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPT--MDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCC--CCEEEEEECCCeEEEEECC
Confidence 457999999998 9999999999999999983
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.057 Score=47.06 Aligned_cols=156 Identities=8% Similarity=0.027 Sum_probs=87.6
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce--e-----c--cCCCeeeEEEccCCCcccce------e
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--V-----A--CPTLASCLTWNHSFSRFNSI------S 93 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--~-----~--~~~~~~~~~~~~~~~~~~~~------~ 93 (197)
..+++++.+ +.++++-+..++|.++|..... +..+..... . . .-.....+++++++..+..+ +
T Consensus 571 ~gvavd~~~-g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLN-NRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred ceEEEECCC-CeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 357777642 6677777888999999976432 111110000 0 0 01245788999887754322 5
Q ss_pred EEEE-----eeEeccc-C---------------CCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccc--ee-eeee
Q psy13207 94 IMYE-----AHSINAE-H---------------KDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFD--IE-TIGN 148 (197)
Q Consensus 94 ~~~~-----~~~~~~~-~---------------~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~--~~-~~~~ 148 (197)
+.++ +.++... . -..-..+++++ +..++++.+.++.|++||..++.... +. ....
T Consensus 649 r~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~ 728 (1057)
T PLN02919 649 REIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERN 728 (1057)
T ss_pred EEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcccc
Confidence 6666 2233200 0 01235688874 44444777888999999986521000 00 0000
Q ss_pred ecC------ceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 149 FED------HYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 149 ~~~------h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+ .......++++|+++ ++++.+.++.|++||+.+++
T Consensus 729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGG 773 (1057)
T ss_pred CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCc
Confidence 001 112346799999988 55566678999999987644
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.037 Score=39.70 Aligned_cols=131 Identities=10% Similarity=-0.020 Sum_probs=76.9
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC--------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD--------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d--------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
.....+++.+.|+ |++.++.... |.|..++.. ++... ....-.....++|+|+++.|..+
T Consensus 84 ~~~~~ND~~vd~~--G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~------~~~~~~~pNGi~~s~dg~~lyv~ds~ 154 (246)
T PF08450_consen 84 PFNRPNDVAVDPD--GNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV------VADGLGFPNGIAFSPDGKTLYVADSF 154 (246)
T ss_dssp CTEEEEEEEE-TT--S-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE------EEEEESSEEEEEEETTSSEEEEEETT
T ss_pred ccCCCceEEEcCC--CCEEEEecCCCccccccccceEEECCC-CeEEE------EecCcccccceEECCcchheeecccc
Confidence 3467889999998 8887776544 446666655 22111 11112356789999999876433
Q ss_pred ---eEEEEe----------eEecc--cCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceec
Q psy13207 93 ---SIMYEA----------HSINA--EHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCT 155 (197)
Q Consensus 93 ---~~~~~~----------~~~~~--~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~ 155 (197)
+..|++ ..+.. ........+++. ++.. ++....+.|.+++.+ ++.+..+......
T Consensus 155 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~--va~~~~~~I~~~~p~------G~~~~~i~~p~~~ 226 (246)
T PF08450_consen 155 NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLW--VADWGGGRIVVFDPD------GKLLREIELPVPR 226 (246)
T ss_dssp TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EE--EEEETTTEEEEEETT------SCEEEEEE-SSSS
T ss_pred cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEE--EEEcCCCEEEEECCC------ccEEEEEcCCCCC
Confidence 344441 11210 111236778887 5555 777788999999976 4555554443347
Q ss_pred EEEEEEc-cCCCEEEEE
Q psy13207 156 VWRVSWN-ITGTIVASS 171 (197)
Q Consensus 156 v~~~~~~-p~~~~l~~~ 171 (197)
+++++|. |+.+.|...
T Consensus 227 ~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 227 PTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp EEEEEEESTTSSEEEEE
T ss_pred EEEEEEECCCCCEEEEE
Confidence 8999994 565555443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0018 Score=53.37 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=60.7
Q ss_pred ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC---------CCcEE
Q psy13207 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD---------DGCVR 178 (197)
Q Consensus 108 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~---------dg~i~ 178 (197)
.|.-++.++..+ .+|...|+|.+-|.++ .+.+.++.+|.+.|.++.. .|+.|++++. |..|+
T Consensus 179 ~v~imR~Nnr~l--f~G~t~G~V~LrD~~s-----~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~Fvk 249 (1118)
T KOG1275|consen 179 GVTIMRYNNRNL--FCGDTRGTVFLRDPNS-----FETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVK 249 (1118)
T ss_pred ceEEEEecCcEE--EeecccceEEeecCCc-----Cceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhh
Confidence 466677777777 8899999999999977 7889999999999976666 5889998875 56679
Q ss_pred EEEcCCCcchhhh
Q psy13207 179 LWKLKKKRKKKKE 191 (197)
Q Consensus 179 iw~~~~~~~~~~~ 191 (197)
+||++..+.+..+
T Consensus 250 VYDLRmmral~PI 262 (1118)
T KOG1275|consen 250 VYDLRMMRALSPI 262 (1118)
T ss_pred hhhhhhhhccCCc
Confidence 9999987665544
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.017 Score=35.71 Aligned_cols=101 Identities=13% Similarity=0.098 Sum_probs=60.7
Q ss_pred eeEEEECC---CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEeccc
Q psy13207 28 VTDVKFGP---KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAE 104 (197)
Q Consensus 28 v~~~~~~~---~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (197)
|+++++.. ++ .+.|+.||.|..|++|+-... +..+ .
T Consensus 2 V~al~~~d~d~dg-~~eLlvGs~D~~IRvf~~~e~--------------------------------------~~Ei--~ 40 (111)
T PF14783_consen 2 VTALCLFDFDGDG-ENELLVGSDDFEIRVFKGDEI--------------------------------------VAEI--T 40 (111)
T ss_pred eeEEEEEecCCCC-cceEEEecCCcEEEEEeCCcE--------------------------------------EEEE--e
Confidence 45555544 31 368999999999999985431 1111 2
Q ss_pred CCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-C--C-CEEEEEeCCCcEEE
Q psy13207 105 HKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI-T--G-TIVASSGDDGCVRL 179 (197)
Q Consensus 105 ~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~--~-~~l~~~~~dg~i~i 179 (197)
....+..++-. +..+ +-+-.+|+|-+|+... .+-..+. +..+.++++.. + | ..|++|-.+|.|-+
T Consensus 41 e~~~v~~L~~~~~~~F--~Y~l~NGTVGvY~~~~-------RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 41 ETDKVTSLCSLGGGRF--AYALANGTVGVYDRSQ-------RLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred cccceEEEEEcCCCEE--EEEecCCEEEEEeCcc-------eeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 34456666655 5556 8888999999988632 2222222 22345554433 3 2 47888888888753
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0034 Score=49.73 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=60.3
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (197)
-...|.-+.|+|. -.++|++..+|.|.+..++-.+ + - +++
T Consensus 19 l~~~i~~~ewnP~--~dLiA~~t~~gelli~R~n~qR-l------w------------------------------tip- 58 (665)
T KOG4640|consen 19 LPINIKRIEWNPK--MDLIATRTEKGELLIHRLNWQR-L------W------------------------------TIP- 58 (665)
T ss_pred cccceEEEEEcCc--cchhheeccCCcEEEEEeccce-e------E------------------------------ecc-
Confidence 4456888999998 8899999999999998876321 1 1 111
Q ss_pred cCCCcee-EEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecEEEEEEc
Q psy13207 104 EHKDLIH-DVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWN 162 (197)
Q Consensus 104 ~~~~~i~-~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~ 162 (197)
.++..++ +++|.++.-+++.|-.||+|++.|..+ +..+.. .......|.++-|+
T Consensus 59 ~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~-----~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 59 IPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEK-----GGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred CCCCccceeeeecCCCCEEEEEecCCeEEEEEccC-----CCceeccccccccchheeecc
Confidence 2333444 666663333338888899999999876 333332 11224456666665
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0073 Score=47.35 Aligned_cols=124 Identities=13% Similarity=0.183 Sum_probs=75.6
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----------------
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---------------- 92 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 92 (197)
+-+.|||. |.+|+|--..| |.+|--.+-..++.+. ...+.-+.|+|..++|++-
T Consensus 214 tyv~wSP~--GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-------Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 214 TYVRWSPK--GTYLVTFHKQG-IALWGGESFDRIQRFY-------HPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred eeEEecCC--ceEEEEEeccc-eeeecCccHHHHHhcc-------CCCceeeecCCccceEEEecCCccccCcccCCCce
Confidence 46899999 99999987665 5688765544433332 3357788899998887532
Q ss_pred eEEEEe------eEeccc--CCCce-eEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 SIMYEA------HSINAE--HKDLI-HDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 ~~~~~~------~~~~~~--~~~~i-~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+.|||+ +.+. . ....+ .-..|+ .+.. +++-....|.||+..+ ..++..-.-.-..|....|+
T Consensus 284 l~IWDI~tG~lkrsF~-~~~~~~~~WP~frWS~DdKy--~Arm~~~sisIyEtps-----f~lld~Kslki~gIr~Fsws 355 (698)
T KOG2314|consen 284 LIIWDIATGLLKRSFP-VIKSPYLKWPIFRWSHDDKY--FARMTGNSISIYETPS-----FMLLDKKSLKISGIRDFSWS 355 (698)
T ss_pred EEEEEccccchhccee-ccCCCccccceEEeccCCce--eEEeccceEEEEecCc-----eeeecccccCCccccCcccC
Confidence 699993 2333 1 11122 234677 3333 3333447788888754 12221111123467888999
Q ss_pred cCCCEEEE
Q psy13207 163 ITGTIVAS 170 (197)
Q Consensus 163 p~~~~l~~ 170 (197)
|.+++||-
T Consensus 356 P~~~llAY 363 (698)
T KOG2314|consen 356 PTSNLLAY 363 (698)
T ss_pred CCcceEEE
Confidence 99888774
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0082 Score=37.12 Aligned_cols=55 Identities=18% Similarity=0.101 Sum_probs=40.4
Q ss_pred CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 117 YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 117 ~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
+.+ +.|+.|..||+|+-. +.+.++.. ...|.+++-... ..++-+-.+|+|-+|+-
T Consensus 16 ~eL--lvGs~D~~IRvf~~~-------e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 16 NEL--LVGSDDFEIRVFKGD-------EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDR 70 (111)
T ss_pred ceE--EEecCCcEEEEEeCC-------cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence 456 999999999999873 45555554 456777777665 55788888888877764
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.044 Score=41.48 Aligned_cols=56 Identities=9% Similarity=0.082 Sum_probs=39.0
Q ss_pred ECCCCCCcEEEEEe----------CCCcEEEEEcCCcccccceeccceec--cCCCeeeEEEccCCCccc
Q psy13207 33 FGPKQLGLVLATCA----------ADGLVRIYEAPDVMNLSQWCLQHEVA--CPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 33 ~~~~~~~~~l~s~~----------~dg~v~iw~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 90 (197)
++|+ |+.|..+. .+..|.+||..+.+.+.++.+....+ .......++++|+|+++.
T Consensus 53 ~spD--g~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~ 120 (352)
T TIGR02658 53 VASD--GSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLL 120 (352)
T ss_pred ECCC--CCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEE
Confidence 8998 76665554 47899999999987766555432211 123345789999999864
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.021 Score=44.97 Aligned_cols=135 Identities=13% Similarity=0.155 Sum_probs=79.9
Q ss_pred ceeEEEECCCCCCcEEEEEeC-----------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAA-----------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS---- 91 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 91 (197)
.|.-+.|||. .++|+|-+. ...++|||+.++...+.+...... ...-.-..|+.+.+++|.
T Consensus 251 ~Vq~idfSP~--EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~--~~~WP~frWS~DdKy~Arm~~~ 326 (698)
T KOG2314|consen 251 GVQFIDFSPN--EKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSP--YLKWPIFRWSHDDKYFARMTGN 326 (698)
T ss_pred CceeeecCCc--cceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCC--ccccceEEeccCCceeEEeccc
Confidence 5888999998 999998752 268999999999877666542111 223356789999999864
Q ss_pred eeEEEE---eeEec--ccCCCceeEEEEcC--CCeEEEEeeCC---CeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 92 ISIMYE---AHSIN--AEHKDLIHDVAYDY--YGLRMATCSSD---QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 92 ~~~~~~---~~~~~--~~~~~~i~~~~~~~--~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
++.+|+ ...+. .-....|....|+| +.+..-+-..+ ..+.+..+.+ ...++.-.-+.-.=..+.|
T Consensus 327 sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs-----~~~iRt~nlfnVsDckLhW 401 (698)
T KOG2314|consen 327 SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPS-----KREIRTKNLFNVSDCKLHW 401 (698)
T ss_pred eEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCc-----cceeeeccceeeeccEEEe
Confidence 377888 11111 12346677788883 33311222211 2344555543 2333333323223345677
Q ss_pred ccCCCEEEE
Q psy13207 162 NITGTIVAS 170 (197)
Q Consensus 162 ~p~~~~l~~ 170 (197)
..+|.+|..
T Consensus 402 Qk~gdyLcv 410 (698)
T KOG2314|consen 402 QKSGDYLCV 410 (698)
T ss_pred ccCCcEEEE
Confidence 778887764
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.012 Score=48.84 Aligned_cols=125 Identities=6% Similarity=0.004 Sum_probs=77.4
Q ss_pred EEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCC---------cccc---eeEEEEeeE-----ec-c--
Q psy13207 44 TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFS---------RFNS---ISIMYEAHS-----IN-A-- 103 (197)
Q Consensus 44 s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~-----~~-~-- 103 (197)
.......|+-.|+..++.+.+|...... + -..+.|+.+ ++.. ++..||.+. .. .
T Consensus 499 ~~~~~~~ly~mDLe~GKVV~eW~~~~~~----~--v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 499 DPNNPNKLYKMDLERGKVVEEWKVHDDI----P--VVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred cCCCCCceEEEecCCCcEEEEeecCCCc----c--eeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 3345678888888888888888764422 1 233334322 1111 145566110 00 0
Q ss_pred --cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 104 --EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 104 --~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
.......|++-. .-.+ |.|+.+|.||+||.-. ...-..+.+-..+|.+|+.+.||+++++.+. ..+.++
T Consensus 573 ~Y~~~~~Fs~~aTt~~G~i--avgs~~G~IRLyd~~g-----~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi 644 (794)
T PF08553_consen 573 QYSSKNNFSCFATTEDGYI--AVGSNKGDIRLYDRLG-----KRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLI 644 (794)
T ss_pred ccccCCCceEEEecCCceE--EEEeCCCcEEeecccc-----hhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEE
Confidence 123345666666 5567 8999999999999532 2223345566789999999999999987764 577777
Q ss_pred Ec
Q psy13207 181 KL 182 (197)
Q Consensus 181 ~~ 182 (197)
+.
T Consensus 645 ~t 646 (794)
T PF08553_consen 645 DT 646 (794)
T ss_pred EE
Confidence 65
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.022 Score=40.76 Aligned_cols=107 Identities=14% Similarity=0.008 Sum_probs=70.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEc-CC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD-YY 117 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 117 (197)
.++++.|+..+.++--|..+++.. |.. .....|.+-+.- ++
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~--We~------------------------------------ilg~RiE~sa~vvgd 64 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLI--WEA------------------------------------ILGVRIECSAIVVGD 64 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEE--eeh------------------------------------hhCceeeeeeEEECC
Confidence 567888888888888888777532 110 112223333332 67
Q ss_pred CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 118 GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 118 ~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+ +.|+..|.+++.+.+++ .....+.....--......+++..+.+|++|++.+..|.++.+++.+
T Consensus 65 fV--V~GCy~g~lYfl~~~tG-----s~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyk 130 (354)
T KOG4649|consen 65 FV--VLGCYSGGLYFLCVKTG-----SQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYK 130 (354)
T ss_pred EE--EEEEccCcEEEEEecch-----hheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEe
Confidence 77 99999999999999874 22222222111112344567899999999999999999998776544
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.037 Score=45.77 Aligned_cols=158 Identities=12% Similarity=0.078 Sum_probs=94.5
Q ss_pred ecCCCcc-eeEEEECCCCCCcEEEEEeCCCc-----EEEEEcCCcccc--ccee---ccce--ec-cCCCeeeEEEccCC
Q psy13207 21 LVDSRTS-VTDVKFGPKQLGLVLATCAADGL-----VRIYEAPDVMNL--SQWC---LQHE--VA-CPTLASCLTWNHSF 86 (197)
Q Consensus 21 ~~~h~~~-v~~~~~~~~~~~~~l~s~~~dg~-----v~iw~~~~~~~~--~~~~---~~~~--~~-~~~~~~~~~~~~~~ 86 (197)
++++... |..+..... ..+|++.++|+. ++||++...+.. +++. ...+ .+ ...++.+++.+.+-
T Consensus 60 fqa~~~siv~~L~~~~~--~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l 137 (933)
T KOG2114|consen 60 FQAYEQSIVQFLYILNK--QNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDL 137 (933)
T ss_pred heecchhhhhHhhcccC--ceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccc
Confidence 4556555 444433332 478888887764 899999754211 1211 1111 11 25678899999887
Q ss_pred Ccccce-----eEEEE--------e-eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 87 SRFNSI-----SIMYE--------A-HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 87 ~~~~~~-----~~~~~--------~-~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
..++.| +..+. . ..+....+.+|+++++. +...+|++. -..|.+|.+.. . ......+.
T Consensus 138 ~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~T--t~~V~~y~l~g---r-~p~~~~ld 211 (933)
T KOG2114|consen 138 KTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVAT--TEQVMLYSLSG---R-TPSLKVLD 211 (933)
T ss_pred cEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEe--cceeEEEEecC---C-Ccceeeec
Confidence 777666 33333 1 11111346789999998 444333443 34677888763 1 22344577
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.|...++|.++++....+++++ +.-+.+|+.+..+.
T Consensus 212 ~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 212 NNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGP 247 (933)
T ss_pred cCCccceeeecCCCCccEEEec-CceEEEEcCCCcce
Confidence 7888999999997555455554 45788898875543
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.032 Score=47.73 Aligned_cols=156 Identities=17% Similarity=0.237 Sum_probs=91.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEc----CCcccc----------c--ceecc-ceecc--------------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEA----PDVMNL----------S--QWCLQ-HEVAC-------------- 73 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~----~~~~~~----------~--~~~~~-~~~~~-------------- 73 (197)
...|.+++|+|+ ++.++-.+.++++.+-+- -..+.+ . .|-.. ..+.+
T Consensus 109 d~GI~aaswS~D--ee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~e 186 (1265)
T KOG1920|consen 109 DNGISAASWSPD--EELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKE 186 (1265)
T ss_pred cCceEEEeecCC--CcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccc
Confidence 467999999999 988888888778766443 111111 0 00000 01110
Q ss_pred --------CCCeeeEEEccCCCcccce----------eEEEE----eeEecccCCCceeEEEEcCCCeEEEEe---eCCC
Q psy13207 74 --------PTLASCLTWNHSFSRFNSI----------SIMYE----AHSINAEHKDLIHDVAYDYYGLRMATC---SSDQ 128 (197)
Q Consensus 74 --------~~~~~~~~~~~~~~~~~~~----------~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~s~---~~d~ 128 (197)
...=+++.|..+|.+++.. +++|+ +..........=.+++|-|...++++- ++|+
T Consensus 187 k~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~ 266 (1265)
T KOG1920|consen 187 KALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDS 266 (1265)
T ss_pred ccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCC
Confidence 1122459999999998763 68888 222221222334567777544433653 3466
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE---EeCCCcEEEEEcCC
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS---SGDDGCVRLWKLKK 184 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~---~~~dg~i~iw~~~~ 184 (197)
.|.+|....- .. ++....+......|..++|+.++..||. ......|++|-+.+
T Consensus 267 ~IvffErNGL-~h-g~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 267 DIVFFERNGL-RH-GEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred cEEEEecCCc-cc-cccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 7888875420 00 1122222223344899999999999988 44445599998765
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.02 Score=44.48 Aligned_cols=71 Identities=14% Similarity=0.274 Sum_probs=42.6
Q ss_pred eEEEEcCCCeEEEEeeCC---CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe------CCCcEEEE
Q psy13207 110 HDVAYDYYGLRMATCSSD---QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG------DDGCVRLW 180 (197)
Q Consensus 110 ~~~~~~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~------~dg~i~iw 180 (197)
+.+-|+|..-+++.++-| |.+-+||.... ..++..+.+-. ..-+.|+||++++.+.. .|..|.||
T Consensus 319 NT~~fsp~~r~il~agF~nl~gni~i~~~~~r----f~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~ 392 (561)
T COG5354 319 NTIFFSPHERYILFAGFDNLQGNIEIFDPAGR----FKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLW 392 (561)
T ss_pred ccccccCcccEEEEecCCccccceEEeccCCc----eEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEE
Confidence 345555222222555544 77889988531 23333444432 24478999999887763 37889999
Q ss_pred EcCCCc
Q psy13207 181 KLKKKR 186 (197)
Q Consensus 181 ~~~~~~ 186 (197)
|+....
T Consensus 393 ~v~g~~ 398 (561)
T COG5354 393 DVYGAK 398 (561)
T ss_pred EecCch
Confidence 986543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.061 Score=38.57 Aligned_cols=156 Identities=8% Similarity=0.012 Sum_probs=89.5
Q ss_pred eeEEEEC-CCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccccee-----------EE
Q psy13207 28 VTDVKFG-PKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSIS-----------IM 95 (197)
Q Consensus 28 v~~~~~~-~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 95 (197)
...+.+. ++ +.++++ ..+ .+.++|..+++..........-........+++.|+|+.+++.. .+
T Consensus 42 ~~G~~~~~~~--g~l~v~-~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v 117 (246)
T PF08450_consen 42 PNGMAFDRPD--GRLYVA-DSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSV 117 (246)
T ss_dssp EEEEEEECTT--SEEEEE-ETT-CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEE
T ss_pred CceEEEEccC--CEEEEE-EcC-ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccce
Confidence 6667777 55 655554 444 44555887764322222110000245678899999998765431 24
Q ss_pred EE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcc-c-ceeeeeeecCceecEEEEEEccCCC
Q psy13207 96 YE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTR-F-DIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 96 ~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~-~-~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
|. +..+. ..-...+.|+|+++. .++++-+..+.|..++...... . ....+..+.......-.+++..+|+
T Consensus 118 ~~~~~~~~~~~~~-~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~ 196 (246)
T PF08450_consen 118 YRIDPDGKVTVVA-DGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN 196 (246)
T ss_dssp EEEETTSEEEEEE-EEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-
T ss_pred EEECCCCeEEEEe-cCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC
Confidence 43 22222 223456789999433 3335677788999999864221 1 1223333333333477899999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcchh
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
+.++.-..+.|.+++.+ ++...
T Consensus 197 l~va~~~~~~I~~~~p~-G~~~~ 218 (246)
T PF08450_consen 197 LWVADWGGGRIVVFDPD-GKLLR 218 (246)
T ss_dssp EEEEEETTTEEEEEETT-SCEEE
T ss_pred EEEEEcCCCEEEEECCC-ccEEE
Confidence 88887788999999987 55443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.088 Score=40.67 Aligned_cols=149 Identities=15% Similarity=0.112 Sum_probs=75.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc--ceeccce-----ecc---CCCeeeEEEccCCCcccceeEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS--QWCLQHE-----VAC---PTLASCLTWNHSFSRFNSISIMY 96 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~--~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~ 96 (197)
.|..+.|.++ ...|+.|-..|.|.||.....+.-. ....... +.. +..+..+.-.-+. .+.-++ -
T Consensus 3 ~v~~vs~a~~--t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~-~~~~gf--~ 77 (395)
T PF08596_consen 3 SVTHVSFAPE--TLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPP-SLKEGF--L 77 (395)
T ss_dssp -EEEEEEETT--TTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--T-T-SEEE--E
T ss_pred eEEEEEecCC--CceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCc-cccccc--C
Confidence 5889999998 7789999999999999876443211 0000000 000 1111111100000 000010 0
Q ss_pred EeeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeee--ec-CceecEEEEEEcc-----CC--
Q psy13207 97 EAHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN--FE-DHYCTVWRVSWNI-----TG-- 165 (197)
Q Consensus 97 ~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~-~h~~~v~~~~~~p-----~~-- 165 (197)
-...+. .....|.+++.+ =-.+ +.|..+|.+.|.|+|...-.....+.. .. .....+.++.|.. |+
T Consensus 78 P~~l~~-~~~g~vtal~~S~iGFv--aigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 78 PLTLLD-AKQGPVTALKNSDIGFV--AIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEE----S-SEEEEEE-BTSEE--EEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred chhhee-ccCCcEeEEecCCCcEE--EEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 022333 457889999998 4445 778889999999998632111111111 11 1245677888873 22
Q ss_pred -CEEEEEeCCCcEEEEEcC
Q psy13207 166 -TIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 166 -~~l~~~~~dg~i~iw~~~ 183 (197)
-.+++|...|.+.+|.+.
T Consensus 155 Si~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEEEEEETTSEEEEEEEE
T ss_pred ceEEEEEeCCCCEEEEEEe
Confidence 478889999999999874
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0069 Score=42.23 Aligned_cols=60 Identities=12% Similarity=0.155 Sum_probs=43.5
Q ss_pred EEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEccCCCEEEEE--eCCCcEEEEEcCCCc
Q psy13207 122 ATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNITGTIVASS--GDDGCVRLWKLKKKR 186 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~~~--~~dg~i~iw~~~~~~ 186 (197)
.+++.|+.|+.|.... .+.+.....|. .++.....+..++.++.+ |.|..++.|++..-.
T Consensus 118 c~~~~dg~ir~~n~~p-----~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~ 180 (238)
T KOG2444|consen 118 CVGAQDGRIRACNIKP-----NKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK 180 (238)
T ss_pred EEeccCCceeeecccc-----CceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence 7888999999999864 45555555566 566666666667777777 788888888876543
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.15 Score=39.75 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=73.3
Q ss_pred CCCcceeEEEECCCCCCcEEE-EEeCC--CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLA-TCAAD--GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------- 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~-s~~~d--g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 92 (197)
...+......|+|+ |+.++ +.+.+ ..|.++++.+++. ..+.. .........|+|+|+.++-.
T Consensus 230 ~~~g~~~~~~~SPD--G~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~-----~~~~d~~p~~SPDG~~I~F~Sdr~g~~ 301 (419)
T PRK04043 230 SSQGMLVVSDVSKD--GSKLLLTMAPKGQPDIYLYDTNTKTL-TQITN-----YPGIDVNGNFVEDDKRIVFVSDRLGYP 301 (419)
T ss_pred cCCCcEEeeEECCC--CCEEEEEEccCCCcEEEEEECCCCcE-EEccc-----CCCccCccEECCCCCEEEEEECCCCCc
Confidence 34455667889999 76554 44444 4566667766532 11111 11123456799999876433
Q ss_pred -eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC---------CeEEEEEccCCcccceeeeeeecCceec
Q psy13207 93 -SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD---------QNIKVTRDVMGTRFDIETIGNFEDHYCT 155 (197)
Q Consensus 93 -~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d---------~~i~~~d~~~~~~~~~~~~~~~~~h~~~ 155 (197)
+.+.+ ...+. .... ....|+ +..+ +-.+.. ..|.+.|+.++ . ...+... ..
T Consensus 302 ~Iy~~dl~~g~~~rlt-~~g~--~~~~~SPDG~~I--a~~~~~~~~~~~~~~~~I~v~d~~~g-----~-~~~LT~~-~~ 369 (419)
T PRK04043 302 NIFMKKLNSGSVEQVV-FHGK--NNSSVSTYKNYI--VYSSRETNNEFGKNTFNLYLISTNSD-----Y-IRRLTAN-GV 369 (419)
T ss_pred eEEEEECCCCCeEeCc-cCCC--cCceECCCCCEE--EEEEcCCCcccCCCCcEEEEEECCCC-----C-eEECCCC-CC
Confidence 33333 21221 1111 124777 4445 333322 36777787652 1 2223222 12
Q ss_pred EEEEEEccCCCEEEEEeCC-Cc--EEEEEcCC
Q psy13207 156 VWRVSWNITGTIVASSGDD-GC--VRLWKLKK 184 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~~d-g~--i~iw~~~~ 184 (197)
.....|+|||+.++-.+.+ +. +.+.++.-
T Consensus 370 ~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 370 NQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred cCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 2358899999988766543 33 44555543
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.11 Score=40.41 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=29.1
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+++..++.||+|+++|.-..+|.+.+.+..-.+.
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~ 250 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEK 250 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccce
Confidence 35799999999999999999999998887654433
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.037 Score=46.01 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=44.8
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
.+++++|+|. .-.|+.|-..|.+.+|..++.+.- + -...++.++..+.|+++|..+.++
T Consensus 61 hatSLCWHpe--~~vLa~gwe~g~~~v~~~~~~e~h-t----v~~th~a~i~~l~wS~~G~~l~t~ 119 (1416)
T KOG3617|consen 61 HATSLCWHPE--EFVLAQGWEMGVSDVQKTNTTETH-T----VVETHPAPIQGLDWSHDGTVLMTL 119 (1416)
T ss_pred ehhhhccChH--HHHHhhccccceeEEEecCCceee-e----eccCCCCCceeEEecCCCCeEEEc
Confidence 3567999998 778899999999999998765421 1 112237789999999999987554
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0049 Score=47.04 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=87.3
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccc------eeEEE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNS------ISIMY 96 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~ 96 (197)
|++.|+.+.-.- .+++.+++.||+++.|.-..-.-. .....+. +-..+.+++.+-++..+.+ +++++
T Consensus 8 hrd~i~hv~~tk---a~fiiqASlDGh~KFWkKs~isGv---EfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~Kvf 81 (558)
T KOG0882|consen 8 HRDVITHVFPTK---AKFIIQASLDGHKKFWKKSRISGV---EFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVF 81 (558)
T ss_pred ccceeeeEeeeh---hheEEeeecchhhhhcCCCCccce---eehhhhHHHHHHHHhhhccccceeEeeccCcccceeEE
Confidence 677777665443 679999999999999985431111 1011111 1234455555556555433 25666
Q ss_pred EeeEecccCCCcee----EEEEc---CCCeEE-EE-eeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 97 EAHSINAEHKDLIH----DVAYD---YYGLRM-AT-CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 97 ~~~~~~~~~~~~i~----~~~~~---~~~~~~-~s-~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
|+..+.-...-... .+.|. ++.+-+ +. .-.++.+.++|-.... .+....-.-|..+|.++.+.|.+..
T Consensus 82 DvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~---~q~~~fkklH~sPV~~i~y~qa~Ds 158 (558)
T KOG0882|consen 82 DVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDF---CQDGYFKKLHFSPVKKIRYNQAGDS 158 (558)
T ss_pred EeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCc---CccceecccccCceEEEEeeccccc
Confidence 65444300000111 12333 222211 22 2356888888876421 1222233448899999999999999
Q ss_pred EEEEeCCCcEEEEEcC
Q psy13207 168 VASSGDDGCVRLWKLK 183 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~ 183 (197)
+++....|-|.-|...
T Consensus 159 ~vSiD~~gmVEyWs~e 174 (558)
T KOG0882|consen 159 AVSIDISGMVEYWSAE 174 (558)
T ss_pred eeeccccceeEeecCC
Confidence 9988888999999876
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.035 Score=42.49 Aligned_cols=129 Identities=8% Similarity=-0.109 Sum_probs=66.1
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceec---cCCCeeeEEEccCCCccc----ceeEEEEeeEecccCCCceeE
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA---CPTLASCLTWNHSFSRFN----SISIMYEAHSINAEHKDLIHD 111 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~ 111 (197)
+..++.++.+|.+..+|..+++.+-......... ....+. ..+.++...+ .+-.+|....+. ......
T Consensus 241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~~~p~~~~~~vy--v~~~~G~l~~~d~~tG~~~W~~~~~~---~~~~ss 315 (377)
T TIGR03300 241 GGQVYAVSYQGRVAALDLRSGRVLWKRDASSYQGPAVDDNRLY--VTDADGVVVALDRRSGSELWKNDELK---YRQLTA 315 (377)
T ss_pred CCEEEEEEcCCEEEEEECCCCcEEEeeccCCccCceEeCCEEE--EECCCCeEEEEECCCCcEEEcccccc---CCcccc
Confidence 4567778889999999998886543222110000 011110 1112221111 111233321111 111122
Q ss_pred EEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 112 VAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 112 ~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
....++.+ ++++.+|.+.++|..+ ++.+..+..+...+..--...+ +.|+.++.||.|+.|
T Consensus 316 p~i~g~~l--~~~~~~G~l~~~d~~t-----G~~~~~~~~~~~~~~~sp~~~~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 316 PAVVGGYL--VVGDFEGYLHWLSRED-----GSFVARLKTDGSGIASPPVVVG-DGLLVQTRDGDLYAF 376 (377)
T ss_pred CEEECCEE--EEEeCCCEEEEEECCC-----CCEEEEEEcCCCccccCCEEEC-CEEEEEeCCceEEEe
Confidence 22236666 8889999999999876 5666555544433322211223 457888899999876
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.29 Score=40.85 Aligned_cols=121 Identities=8% Similarity=0.026 Sum_probs=79.1
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc--ccce---eEEEE--
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR--FNSI---SIMYE-- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~-- 97 (197)
..++.+++.+.+ -..+|.|-.+|.|..+.-.-.+... .+......++.+|+.+.+..++.. ++++ +.+|.
T Consensus 125 ~~p~s~l~Vs~~--l~~Iv~Gf~nG~V~~~~GDi~RDrg-sr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~ 201 (933)
T KOG2114|consen 125 PSPASSLAVSED--LKTIVCGFTNGLVICYKGDILRDRG-SRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLS 201 (933)
T ss_pred CCcceEEEEEcc--ccEEEEEecCcEEEEEcCcchhccc-cceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEec
Confidence 457888888887 7789999999999988533211111 111222234889999999998877 3333 56666
Q ss_pred -----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-CceecE
Q psy13207 98 -----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DHYCTV 156 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h~~~v 156 (197)
+..+. .|+..++|..++ +..- +.|+....+.+||.+. ..+...+. +|+...
T Consensus 202 gr~p~~~~ld-~~G~~lnCss~~~~t~q--fIca~~e~l~fY~sd~-----~~~cfaf~~g~kk~~ 259 (933)
T KOG2114|consen 202 GRTPSLKVLD-NNGISLNCSSFSDGTYQ--FICAGSEFLYFYDSDG-----RGPCFAFEVGEKKEM 259 (933)
T ss_pred CCCcceeeec-cCCccceeeecCCCCcc--EEEecCceEEEEcCCC-----cceeeeecCCCeEEE
Confidence 33344 677888999998 5553 3556677889999864 44455555 665443
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.26 Score=38.16 Aligned_cols=159 Identities=13% Similarity=0.143 Sum_probs=80.2
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce-ec--cCCCeeeEEEcc---CCCc-----c
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE-VA--CPTLASCLTWNH---SFSR-----F 89 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~---~~~~-----~ 89 (197)
+....++|++++.+.- | ++|.|.++|.+.|.|++.+..+..-.+... .. ....++++.|.. .++- +
T Consensus 82 ~~~~~g~vtal~~S~i--G-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L 158 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDI--G-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICL 158 (395)
T ss_dssp E---S-SEEEEEE-BT--S-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEE
T ss_pred eeccCCcEeEEecCCC--c-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEE
Confidence 4556899999999754 4 899999999999999998876544333221 11 145677787763 2211 1
Q ss_pred cce-----eEEEE-------------eeEecccCCCceeEEE-Ec----------------------CCCeEEEEeeCCC
Q psy13207 90 NSI-----SIMYE-------------AHSINAEHKDLIHDVA-YD----------------------YYGLRMATCSSDQ 128 (197)
Q Consensus 90 ~~~-----~~~~~-------------~~~~~~~~~~~i~~~~-~~----------------------~~~~~~~s~~~d~ 128 (197)
..+ +.+|. ..... .+...|..|. ++ -+.+ +....+.
T Consensus 159 ~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~-~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~--vVvvSe~ 235 (395)
T PF08596_consen 159 LVGTNSGNVLTFKILPSSNGRFSVQFAGATT-NHDSPILSIIPINADTGESALATISAMQGLSKGISIPGY--VVVVSES 235 (395)
T ss_dssp EEEETTSEEEEEEEEE-GGG-EEEEEEEEE---SS----EEEEEETTT--B-B-BHHHHHGGGGT----EE--EEEE-SS
T ss_pred EEEeCCCCEEEEEEecCCCCceEEEEeeccc-cCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcE--EEEEccc
Confidence 211 33343 11111 2344444433 21 0123 4555677
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEE-----ccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW-----NITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~-----~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+|++...+ .+..............+.+ ...+..|++-..+|.++++.+...+++..
T Consensus 236 ~irv~~~~~-----~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~ 297 (395)
T PF08596_consen 236 DIRVFKPPK-----SKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKS 297 (395)
T ss_dssp EEEEE-TT--------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEE
T ss_pred ceEEEeCCC-----CcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhc
Confidence 889988765 2222221122223333444 23577888889999999999988765543
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.014 Score=29.45 Aligned_cols=32 Identities=31% Similarity=0.431 Sum_probs=26.7
Q ss_pred cceeEEEECCCCCC--cEEEEEeCCCcEEEEEcCC
Q psy13207 26 TSVTDVKFGPKQLG--LVLATCAADGLVRIYEAPD 58 (197)
Q Consensus 26 ~~v~~~~~~~~~~~--~~l~s~~~dg~v~iw~~~~ 58 (197)
++|.+++|+|.+ + .+|+-+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~-~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEP-GGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCC-CcccEEEEEccCCeEEEEEccc
Confidence 468999999863 4 6888888889999999985
|
It contains a characteristic DLL sequence motif. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.49 Score=38.77 Aligned_cols=131 Identities=11% Similarity=0.136 Sum_probs=66.4
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
-.|....++..-.....-+.=+.- +...+.-+...++.|||.+.+.. .....+.
T Consensus 17 ~~w~~t~~~~T~i~~~~li~gss~--~k~a~V~~~~~~LtIWD~~~~~l----E~~~~f~-------------------- 70 (631)
T PF12234_consen 17 IEWLLTSTFETGISNPSLISGSSI--KKIAVVDSSRSELTIWDTRSGVL----EYEESFS-------------------- 70 (631)
T ss_pred EEEEEEEEEecCCCCcceEeeccc--CcEEEEECCCCEEEEEEcCCcEE----EEeeeec--------------------
Confidence 345555555443344444444443 44333334445899999887641 2222222
Q ss_pred eEEEEeeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEcc----CCcccceeeeee--ecCce-ecEEEEEEcc
Q psy13207 93 SIMYEAHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDV----MGTRFDIETIGN--FEDHY-CTVWRVSWNI 163 (197)
Q Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~----~~~~~~~~~~~~--~~~h~-~~v~~~~~~p 163 (197)
....|.++.|. ++.-.+++.+....|.++.-. +........+.. +..|+ .+|.+..|.+
T Consensus 71 ------------~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~ 138 (631)
T PF12234_consen 71 ------------EDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLK 138 (631)
T ss_pred ------------CCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEec
Confidence 23445555554 222222666666666665331 000011112222 23333 5789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcC
Q psy13207 164 TGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~ 183 (197)
+|.+++.+ ++.+.|+|-.
T Consensus 139 ~G~LvV~s--GNqlfv~dk~ 156 (631)
T PF12234_consen 139 DGTLVVGS--GNQLFVFDKW 156 (631)
T ss_pred CCeEEEEe--CCEEEEECCC
Confidence 99766544 4578888653
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.028 Score=28.31 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=25.9
Q ss_pred cEEEEEEccC-C--CEEEEEeCCCcEEEEEcCC
Q psy13207 155 TVWRVSWNIT-G--TIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 155 ~v~~~~~~p~-~--~~l~~~~~dg~i~iw~~~~ 184 (197)
.|.++.|+|+ + .+|+.+-.-|.|.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 6889999985 4 5888888889999999995
|
It contains a characteristic DLL sequence motif. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.19 Score=38.50 Aligned_cols=102 Identities=15% Similarity=0.024 Sum_probs=59.5
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (197)
+..++.++.+|.|.-+|..+++.+=+..... .........+..
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~-------------------------------------~~~~~p~v~~~~ 107 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDE-------------------------------------RLSGGVGADGGL 107 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCC-------------------------------------CcccceEEcCCE
Confidence 5578888888999999988876431111100 000112223455
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE-EEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR-VSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+ +.++.++.+..+|..+ ++.+-..... ..+.+ ... .+..++.++.+|.+..+|.++++.
T Consensus 108 v--~v~~~~g~l~ald~~t-----G~~~W~~~~~-~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~ 167 (377)
T TIGR03300 108 V--FVGTEKGEVIALDAED-----GKELWRAKLS-SEVLSPPLV--ANGLVVVRTNDGRLTALDAATGER 167 (377)
T ss_pred E--EEEcCCCEEEEEECCC-----CcEeeeeccC-ceeecCCEE--ECCEEEEECCCCeEEEEEcCCCce
Confidence 5 6778889999999876 3333222211 11211 111 245677777899999999987664
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.17 Score=35.79 Aligned_cols=105 Identities=13% Similarity=0.013 Sum_probs=62.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (197)
+..+++++.++.|..||..+++.+-+..... ..... ....++.
T Consensus 36 ~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~----------------------------------~~~~~---~~~~~~~ 78 (238)
T PF13360_consen 36 GGRVYVASGDGNLYALDAKTGKVLWRFDLPG----------------------------------PISGA---PVVDGGR 78 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSEEEEEEECSS----------------------------------CGGSG---EEEETTE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEeeccc----------------------------------cccce---eeecccc
Confidence 5567777899999999998886442222111 00001 1222555
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeee-cCc--e-ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNF-EDH--Y-CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~h--~-~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+ +.++.++.+..+|.+++ +.+-.. ... . ..........++..++.+..++.|..+|+++++.
T Consensus 79 v--~v~~~~~~l~~~d~~tG-----~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~ 144 (238)
T PF13360_consen 79 V--YVGTSDGSLYALDAKTG-----KVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKL 144 (238)
T ss_dssp E--EEEETTSEEEEEETTTS-----CEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEE
T ss_pred c--ccccceeeeEecccCCc-----ceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcE
Confidence 5 56667889999998763 333331 111 0 0112223333478888888899999999998875
|
... |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.072 Score=43.79 Aligned_cols=143 Identities=10% Similarity=0.133 Sum_probs=85.8
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE---
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM--- 95 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--- 95 (197)
..+.+.|++++ +++|+-|..+|.|++.+....- ...+. + ... ..+|.+++++ +.+
T Consensus 38 ~~D~is~~av~----~~~~~~GtH~g~v~~~~~~~~~-~~~~~--~----s~~------~~~Gey~asCS~DGkv~I~sl 100 (846)
T KOG2066|consen 38 QNDAISCCAVH----DKFFALGTHRGAVYLTTCQGNP-KTNFD--H----SSS------ILEGEYVASCSDDGKVVIGSL 100 (846)
T ss_pred hhhHHHHHHhh----cceeeeccccceEEEEecCCcc-ccccc--c----ccc------ccCCceEEEecCCCcEEEeec
Confidence 35677777775 4589999999999999976431 11111 0 000 3334444433 111
Q ss_pred EE---eeEecccCCCceeEEEEcCCC-----eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE---AHSINAEHKDLIHDVAYDYYG-----LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~---~~~~~~~~~~~i~~~~~~~~~-----~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
++ ...+ ....++.+++++|++ -+|++|+..| +.++..+= +.......+..-.++|.++.|. |++
T Consensus 101 ~~~~~~~~~--df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~w---lgnk~~v~l~~~eG~I~~i~W~--g~l 172 (846)
T KOG2066|consen 101 FTDDEITQY--DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNW---LGNKDSVVLSEGEGPIHSIKWR--GNL 172 (846)
T ss_pred cCCccceeE--ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhh---hcCccceeeecCccceEEEEec--CcE
Confidence 11 1111 234678888888541 2349999999 77665431 1111111344456799999995 899
Q ss_pred EEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+|-++.+ -|++||..+.+.+..++
T Consensus 173 IAWand~-Gv~vyd~~~~~~l~~i~ 196 (846)
T KOG2066|consen 173 IAWANDD-GVKVYDTPTRQRLTNIP 196 (846)
T ss_pred EEEecCC-CcEEEeccccceeeccC
Confidence 9999766 58999998876655443
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.11 Score=40.97 Aligned_cols=128 Identities=8% Similarity=0.046 Sum_probs=80.0
Q ss_pred EEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc--ccc----------eeEEEE--------eeE
Q psy13207 41 VLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR--FNS----------ISIMYE--------AHS 100 (197)
Q Consensus 41 ~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~--------~~~ 100 (197)
+|.++.....++-.|+..++.+.+|..... |.-+.+.|+.+. +.. .+.-|| +..
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d------i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD------INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCC------cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence 355666667777778888888877776542 555566665543 211 134444 111
Q ss_pred ecccCC----CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 101 INAEHK----DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 101 ~~~~~~----~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
.+ +|. ....|.+-. .-++ +.|+.+|.||+||.-. ...-..+.+...+|..+..+.+|+++++.+ +.
T Consensus 422 ~q-~kqy~~k~nFsc~aTT~sG~I--vvgS~~GdIRLYdri~-----~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~t 492 (644)
T KOG2395|consen 422 VQ-SKQYSTKNNFSCFATTESGYI--VVGSLKGDIRLYDRIG-----RRAKTALPGLGDAIKHVDVTADGKWILATC-KT 492 (644)
T ss_pred ee-ccccccccccceeeecCCceE--EEeecCCcEEeehhhh-----hhhhhcccccCCceeeEEeeccCcEEEEec-cc
Confidence 11 221 223344433 5567 8999999999999721 222334566778999999999999888776 45
Q ss_pred cEEEEEcC
Q psy13207 176 CVRLWKLK 183 (197)
Q Consensus 176 ~i~iw~~~ 183 (197)
.+.+-++.
T Consensus 493 yLlLi~t~ 500 (644)
T KOG2395|consen 493 YLLLIDTL 500 (644)
T ss_pred EEEEEEEe
Confidence 66666553
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.52 Score=34.95 Aligned_cols=159 Identities=14% Similarity=0.116 Sum_probs=86.8
Q ss_pred cccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEe-------CCCcEE-----------EEEcCCccccc
Q psy13207 8 SEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCA-------ADGLVR-----------IYEAPDVMNLS 63 (197)
Q Consensus 8 ~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~-------~dg~v~-----------iw~~~~~~~~~ 63 (197)
..+-+-+|+.. .++..|.=.-..+.+.|+ |+.|+.+. ..|.-+ .-|..+++.+.
T Consensus 75 g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pD--G~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~ 152 (305)
T PF07433_consen 75 GRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPD--GETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLE 152 (305)
T ss_pred CcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCC--CCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceee
Confidence 34556666655 234455445566788998 86666552 123333 33334444333
Q ss_pred ceeccceeccCCCeeeEEEccCCCcccce------------eEEEE----eeEec------ccCCCceeEEEEcCCC-eE
Q psy13207 64 QWCLQHEVACPTLASCLTWNHSFSRFNSI------------SIMYE----AHSIN------AEHKDLIHDVAYDYYG-LR 120 (197)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~----~~~~~------~~~~~~i~~~~~~~~~-~~ 120 (197)
++.+... .+..++..+++.++|..+... +-+++ +..+. ......+-+|+++.+. ..
T Consensus 153 q~~Lp~~-~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~i 231 (305)
T PF07433_consen 153 QVELPPD-LHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLI 231 (305)
T ss_pred eeecCcc-ccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEE
Confidence 3222110 015678889999988765432 23333 11111 0234678899998332 33
Q ss_pred EEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 121 MATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 121 ~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
.+|+-.-+.+.+||..+ +..+.... -..+..++-.+++ ++++.+. |.+.
T Consensus 232 a~tsPrGg~~~~~d~~t-----g~~~~~~~--l~D~cGva~~~~~-f~~ssG~-G~~~ 280 (305)
T PF07433_consen 232 AVTSPRGGRVAVWDAAT-----GRLLGSVP--LPDACGVAPTDDG-FLVSSGQ-GQLI 280 (305)
T ss_pred EEECCCCCEEEEEECCC-----CCEeeccc--cCceeeeeecCCc-eEEeCCC-ccEE
Confidence 36666789999999977 45444332 2245667766666 5555544 4443
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.34 Score=36.89 Aligned_cols=151 Identities=12% Similarity=0.145 Sum_probs=76.3
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc---eecc----------CCCeeeEEEccCCCcccc
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH---EVAC----------PTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~---~~~~----------~~~~~~~~~~~~~~~~~~ 91 (197)
...+....|+|+ |+.++-.. ++.|.+++..++...+ ++... ...+ -..-..+-|+|++++|+.
T Consensus 42 ~~~~~~~~~sP~--g~~~~~v~-~~nly~~~~~~~~~~~-lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~ 117 (353)
T PF00930_consen 42 PPKLQDAKWSPD--GKYIAFVR-DNNLYLRDLATGQETQ-LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAF 117 (353)
T ss_dssp ETTBSEEEE-SS--STEEEEEE-TTEEEEESSTTSEEEE-SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEE
T ss_pred ccccccceeecC--CCeeEEEe-cCceEEEECCCCCeEE-eccccceeEEcCccceeccccccccccceEECCCCCEEEE
Confidence 467889999999 98888775 6799999887663221 11111 0000 123467899999999764
Q ss_pred e------eEEEEeeEecccCC---CceeEEEEcCCCeEEEEeeCCCe--EEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 92 I------SIMYEAHSINAEHK---DLIHDVAYDYYGLRMATCSSDQN--IKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 92 ~------~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~s~~~d~~--i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
. +..+.+.... ... ..+..+.+. ..|..... +.|+|+.+++.........+..-...+..+.
T Consensus 118 ~~~d~~~v~~~~~~~~~-~~~~~yp~~~~~~YP------k~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~ 190 (353)
T PF00930_consen 118 LRFDEREVPEYPLPDYS-PPDSQYPEVESIRYP------KAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVG 190 (353)
T ss_dssp EEEE-TTS-EEEEEEES-SSTESS-EEEEEE--------BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEE
T ss_pred EEECCcCCceEEeeccC-CccccCCcccccccC------CCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccce
Confidence 3 2333333332 111 134444443 12333333 4567876532211111111223456789999
Q ss_pred EccCCCEEEEE--eCCC---cEEEEEcCCCc
Q psy13207 161 WNITGTIVASS--GDDG---CVRLWKLKKKR 186 (197)
Q Consensus 161 ~~p~~~~l~~~--~~dg---~i~iw~~~~~~ 186 (197)
|.++++.|+.. ..+. .+.++|..++.
T Consensus 191 W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~ 221 (353)
T PF00930_consen 191 WSPDGKRLWVQWLNRDQNRLDLVLCDASTGE 221 (353)
T ss_dssp EEETTEEEEEEEEETTSTEEEEEEEEECTTT
T ss_pred ecCCCcEEEEEEcccCCCEEEEEEEECCCCc
Confidence 99999834333 3332 25566776543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.4 Score=39.05 Aligned_cols=88 Identities=15% Similarity=0.030 Sum_probs=52.3
Q ss_pred CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEeeEecc----------------cCC
Q psy13207 49 GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEAHSINA----------------EHK 106 (197)
Q Consensus 49 g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----------------~~~ 106 (197)
++|.+.|..+... ........++-......+.++|+|+++..+ +.++|+..+.. .-.
T Consensus 296 n~V~VID~~t~~~-~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 296 SKVPVVDGRKAAN-AGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CEEEEEECCcccc-CCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 4566666654100 001223344446788899999999997554 67777222110 112
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEEccC
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
..-...+|.++.-.+.|..-|..|-.|++..
T Consensus 375 lGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 375 LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 3345677884433337788899999999864
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.61 Score=34.95 Aligned_cols=140 Identities=9% Similarity=0.024 Sum_probs=80.9
Q ss_pred CcEEEEEeC----------CCcEEEEEcCCc-ccccceeccceeccCCCeeeEEEccCCCcccce----eEEEEee----
Q psy13207 39 GLVLATCAA----------DGLVRIYEAPDV-MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYEAH---- 99 (197)
Q Consensus 39 ~~~l~s~~~----------dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---- 99 (197)
..+|+.|.. .|.|.++++... .....+.+......+.+|.+++-- .+. ++.+ +.+|++.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~g~~l~v~~l~~~~~ 119 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAVGNKLYVYDLDNSKT 119 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEEETTEEEEEEEETTSS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEeecCEEEEEEccCccc
Confidence 466776642 289999999874 222234444444447788887766 333 4333 6777711
Q ss_pred --Eecc-cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 100 --SINA-EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 100 --~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
.... .....+.++...++.+ +.|.....+.++..+... .....+. -......+.++.+-++++.++.+..+|.
T Consensus 120 l~~~~~~~~~~~i~sl~~~~~~I--~vgD~~~sv~~~~~~~~~-~~l~~va-~d~~~~~v~~~~~l~d~~~~i~~D~~gn 195 (321)
T PF03178_consen 120 LLKKAFYDSPFYITSLSVFKNYI--LVGDAMKSVSLLRYDEEN-NKLILVA-RDYQPRWVTAAEFLVDEDTIIVGDKDGN 195 (321)
T ss_dssp EEEEEEE-BSSSEEEEEEETTEE--EEEESSSSEEEEEEETTT-E-EEEEE-EESS-BEEEEEEEE-SSSEEEEEETTSE
T ss_pred chhhheecceEEEEEEeccccEE--EEEEcccCEEEEEEEccC-CEEEEEE-ecCCCccEEEEEEecCCcEEEEEcCCCe
Confidence 1110 1223566666667877 888888888777554210 1011221 1223557888999877778999999999
Q ss_pred EEEEEcCC
Q psy13207 177 VRLWKLKK 184 (197)
Q Consensus 177 i~iw~~~~ 184 (197)
+.++..+.
T Consensus 196 l~~l~~~~ 203 (321)
T PF03178_consen 196 LFVLRYNP 203 (321)
T ss_dssp EEEEEE-S
T ss_pred EEEEEECC
Confidence 99998863
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.055 Score=43.77 Aligned_cols=81 Identities=11% Similarity=0.127 Sum_probs=53.3
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (197)
-.+.+.....+++ ..++|.|+..|.|.++-++....... .. +. ....
T Consensus 75 ~~~~~~~~~vs~~--e~lvAagt~~g~V~v~ql~~~~p~~~-~~--------------~t----------------~~d~ 121 (726)
T KOG3621|consen 75 ATGITCVRSVSSV--EYLVAAGTASGRVSVFQLNKELPRDL-DY--------------VT----------------PCDK 121 (726)
T ss_pred ccceEEEEEecch--hHhhhhhcCCceEEeehhhccCCCcc-ee--------------ec----------------cccc
Confidence 4455666777887 78888999999999988876322111 10 00 1111
Q ss_pred cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC
Q psy13207 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
.|...|++++|+.+...+.+|...|.|.+-.+.+
T Consensus 122 ~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 122 SHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 4677788888886666668888888887766653
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.017 Score=48.76 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=53.3
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
...+ +.|++.|.+-..|...+ ......-..-..+|.+++|+.+|+.++.|-.+|.|.+||+...+..+.+.+
T Consensus 99 ~~~i--vi~Ts~ghvl~~d~~~n----L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e 170 (1206)
T KOG2079|consen 99 VVPI--VIGTSHGHVLLSDMTGN----LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE 170 (1206)
T ss_pred eeeE--EEEcCchhhhhhhhhcc----cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence 4445 88888999999888642 111112122256899999999999999999999999999998776665543
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.14 Score=36.19 Aligned_cols=82 Identities=10% Similarity=-0.034 Sum_probs=54.3
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccc-ceeeeee-ec-------CceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF-DIETIGN-FE-------DHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~-~~~~~~~-~~-------~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
..+..+...++.+ ++-+.+|.+++||+++.+.. ....+.. +. .....|..+.++.+|.-+++-+ +|..
T Consensus 13 s~~~~l~~~~~~L--l~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~ 89 (219)
T PF07569_consen 13 SPVSFLECNGSYL--LAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDS 89 (219)
T ss_pred CceEEEEeCCCEE--EEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCE
Confidence 3445566557777 88899999999999873211 1111111 11 3456788899999998887765 5789
Q ss_pred EEEEcCCCcchhhhh
Q psy13207 178 RLWKLKKKRKKKKEE 192 (197)
Q Consensus 178 ~iw~~~~~~~~~~~~ 192 (197)
+.|+.+. +.|..+.
T Consensus 90 y~y~~~L-~~W~~vs 103 (219)
T PF07569_consen 90 YSYSPDL-GCWIRVS 103 (219)
T ss_pred EEecccc-ceeEEec
Confidence 9998764 5565544
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.11 Score=44.37 Aligned_cols=68 Identities=19% Similarity=0.224 Sum_probs=43.5
Q ss_pred CCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceec---EEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 106 KDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCT---VWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 106 ~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~---v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
..+|.+++|+ +..+ +.|-.+|.|.+||... ...+..+..|..+ |..+.+..++..++++...|. +|
T Consensus 130 ~~~Vtsvafn~dg~~l--~~G~~~G~V~v~D~~~-----~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~ 200 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLL--LAGLGDGHVTVWDMHR-----AKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FW 200 (1206)
T ss_pred CCcceeeEecCCCcee--ccccCCCcEEEEEccC-----CcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eE
Confidence 4567777777 4445 7888899999999965 4455555444333 334444445666777777776 45
Q ss_pred Ec
Q psy13207 181 KL 182 (197)
Q Consensus 181 ~~ 182 (197)
++
T Consensus 201 ~l 202 (1206)
T KOG2079|consen 201 KL 202 (1206)
T ss_pred EE
Confidence 44
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.36 Score=37.80 Aligned_cols=150 Identities=9% Similarity=0.003 Sum_probs=80.5
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEe---CC-CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCA---AD-GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~---~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
..-...+..-+|+|+ +..++..+ .. ..+.++++.+++...... ....-....|+|+|+.++-.
T Consensus 189 ~~~~~~~~~p~ws~~--~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~------~~g~~~~P~fspDG~~l~f~~~rdg 260 (425)
T COG0823 189 TDSGSLILTPAWSPD--GKKLAYVSFELGGCPRIYYLDLNTGKRPVILN------FNGNNGAPAFSPDGSKLAFSSSRDG 260 (425)
T ss_pred cccCcceeccccCcC--CCceEEEEEecCCCceEEEEeccCCccceeec------cCCccCCccCCCCCCEEEEEECCCC
Confidence 334456777889998 76655442 22 358889998876432222 13344567899999887544
Q ss_pred ---eEEEE-----eeEecccCCCcee-EEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ---SIMYE-----AHSINAEHKDLIH-DVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ---~~~~~-----~~~~~~~~~~~i~-~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+.++| +..+. +...+. .-.|+ +..+. .+.+..|.-.||-.... +.....+......-..-.|
T Consensus 261 ~~~iy~~dl~~~~~~~Lt--~~~gi~~~Ps~spdG~~iv-f~Sdr~G~p~I~~~~~~----g~~~~riT~~~~~~~~p~~ 333 (425)
T COG0823 261 SPDIYLMDLDGKNLPRLT--NGFGINTSPSWSPDGSKIV-FTSDRGGRPQIYLYDLE----GSQVTRLTFSGGGNSNPVW 333 (425)
T ss_pred CccEEEEcCCCCcceecc--cCCccccCccCCCCCCEEE-EEeCCCCCcceEEECCC----CCceeEeeccCCCCcCccC
Confidence 45555 22222 122222 33455 44442 33445565555544321 1212222222222227889
Q ss_pred ccCCCEEEEEeCC-Cc--EEEEEcCCCc
Q psy13207 162 NITGTIVASSGDD-GC--VRLWKLKKKR 186 (197)
Q Consensus 162 ~p~~~~l~~~~~d-g~--i~iw~~~~~~ 186 (197)
+|||++++..+.. |. |.+.|+.+..
T Consensus 334 SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 334 SPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred CCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 9999999887743 44 5556555444
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.76 Score=37.55 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=40.7
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcc
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRK 187 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~ 187 (197)
++.|.+.|.++..+.....+..+.- ......+.++|||+++++++ .+.++.+.|+.+.+.
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 5778999986511111223333322 34568899999999887766 589999999988654
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=94.80 E-value=1.1 Score=32.47 Aligned_cols=128 Identities=12% Similarity=0.091 Sum_probs=69.5
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEe
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEA 98 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (197)
..+.+-...+.++.|+|+. +.+++.....+.|...+.. ++.++.+.+
T Consensus 15 ~~l~g~~~e~SGLTy~pd~-~tLfaV~d~~~~i~els~~-G~vlr~i~l------------------------------- 61 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDT-GTLFAVQDEPGEIYELSLD-GKVLRRIPL------------------------------- 61 (248)
T ss_dssp EE-TT--S-EEEEEEETTT-TEEEEEETTTTEEEEEETT---EEEEEE--------------------------------
T ss_pred eECCCccCCccccEEcCCC-CeEEEEECCCCEEEEEcCC-CCEEEEEeC-------------------------------
Confidence 3466666679999999962 5677777788888777754 443322221
Q ss_pred eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc-cceeeeeee-----cCceecEEEEEEccCCCEEEEEe
Q psy13207 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR-FDIETIGNF-----EDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~-~~~~~~~~~-----~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
.-....-.|++.++..++++--+++.+.++++...+. .+......+ ..++..+-.++|+|.++.|+.+-
T Consensus 62 -----~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~k 136 (248)
T PF06977_consen 62 -----DGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAK 136 (248)
T ss_dssp -----SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEE
T ss_pred -----CCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEe
Confidence 1123456677773333224444588888888843211 111111111 13455689999999877777777
Q ss_pred CCCcEEEEEcCC
Q psy13207 173 DDGCVRLWKLKK 184 (197)
Q Consensus 173 ~dg~i~iw~~~~ 184 (197)
...-..+|.++.
T Consensus 137 E~~P~~l~~~~~ 148 (248)
T PF06977_consen 137 ERKPKRLYEVNG 148 (248)
T ss_dssp ESSSEEEEEEES
T ss_pred CCCChhhEEEcc
Confidence 777777777654
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.95 Score=35.01 Aligned_cols=128 Identities=10% Similarity=-0.020 Sum_probs=64.9
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccce-ec----cCCCeeeEEEccCCCccc----ceeEEEEeeEecccCCCce
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHE-VA----CPTLASCLTWNHSFSRFN----SISIMYEAHSINAEHKDLI 109 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i 109 (197)
+..++.++.+|.+...|..+++.+ |+.... .. ....+. ..+.++..++ .+-.+|...... + ...
T Consensus 256 ~~~vy~~~~~g~l~ald~~tG~~~--W~~~~~~~~~~~~~~~~vy--~~~~~g~l~ald~~tG~~~W~~~~~~--~-~~~ 328 (394)
T PRK11138 256 GGVVYALAYNGNLVALDLRSGQIV--WKREYGSVNDFAVDGGRIY--LVDQNDRVYALDTRGGVELWSQSDLL--H-RLL 328 (394)
T ss_pred CCEEEEEEcCCeEEEEECCCCCEE--EeecCCCccCcEEECCEEE--EEcCCCeEEEEECCCCcEEEcccccC--C-Ccc
Confidence 445666778899999999888754 332110 00 001111 1112222211 112344321111 0 111
Q ss_pred eEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE-EEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 110 HDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR-VSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 110 ~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
......+..+ +.++.||.+..+|..+ ++.+....-....+.+ ..+ .+..|+.++.||.++.++.
T Consensus 329 ~sp~v~~g~l--~v~~~~G~l~~ld~~t-----G~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 329 TAPVLYNGYL--VVGDSEGYLHWINRED-----GRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred cCCEEECCEE--EEEeCCCEEEEEECCC-----CCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 2222235666 7889999999999877 4444443322222221 122 2457888899999988865
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=94.71 E-value=1.1 Score=32.35 Aligned_cols=144 Identities=10% Similarity=0.079 Sum_probs=71.2
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc------cceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL------SQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
+-.-++++..+ +.++++--.++.+.++++...... ..+.+.........+..++|++.++.|..+ ..
T Consensus 65 ~D~EgI~y~g~--~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~ 142 (248)
T PF06977_consen 65 GDYEGITYLGN--GRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKR 142 (248)
T ss_dssp SSEEEEEE-ST--TEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEE
T ss_pred CCceeEEEECC--CEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChh
Confidence 34566777665 777766666899999998543211 111211111125679999999987776544 34
Q ss_pred EEEeeE-----------e-----cccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeee--ecC--
Q psy13207 95 MYEAHS-----------I-----NAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN--FED-- 151 (197)
Q Consensus 95 ~~~~~~-----------~-----~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~-- 151 (197)
+|.+.. . .......+.+++++ ++.+ +-......|..+|.. ++.+.. +..
T Consensus 143 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~ll--iLS~es~~l~~~d~~------G~~~~~~~L~~g~ 214 (248)
T PF06977_consen 143 LYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLL--ILSDESRLLLELDRQ------GRVVSSLSLDRGF 214 (248)
T ss_dssp EEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEE--EEETTTTEEEEE-TT--------EEEEEE-STTG
T ss_pred hEEEccccCccceeeccccccccccceeccccceEEcCCCCeEE--EEECCCCeEEEECCC------CCEEEEEEeCCcc
Confidence 444211 0 00233457788888 3344 667778888888854 333332 222
Q ss_pred c-----eecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 152 H-----YCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 152 h-----~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
| -..--.++|.++|++.++ +.-+..+.|
T Consensus 215 ~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlfy~f 247 (248)
T PF06977_consen 215 HGLSKDIPQPEGIAFDPDGNLYIV-SEPNLFYRF 247 (248)
T ss_dssp GG-SS---SEEEEEE-TT--EEEE-ETTTEEEEE
T ss_pred cCcccccCCccEEEECCCCCEEEE-cCCceEEEe
Confidence 1 124578999999975554 455555544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.63 E-value=1.4 Score=35.86 Aligned_cols=60 Identities=10% Similarity=-0.014 Sum_probs=37.3
Q ss_pred eEEEEEccC-CcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCcchhhhhhh
Q psy13207 129 NIKVTRDVM-GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--CVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 129 ~i~~~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~ 194 (197)
.+..||.++ .. ...+..+.........+.+ +|++.+.|+.|| ++..||..+ .+|..+...
T Consensus 481 ~ve~Ydp~~~~~---W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~-~~W~~~~~~ 543 (557)
T PHA02713 481 CIFRYNTNTYNG---WELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYT-YEWNHICHQ 543 (557)
T ss_pred eEEEecCCCCCC---eeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccc-ccccchhhh
Confidence 456788765 22 3444445443333333333 688999999888 788888876 557666543
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=94.52 E-value=1.3 Score=37.54 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=41.2
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 92 (197)
....|++-..+ | +||.|+.+|.||+||-- ++. -...+++ +.+|..+..+.+|++++++
T Consensus 578 ~~Fs~~aTt~~--G-~iavgs~~G~IRLyd~~-g~~-----AKT~lp~lG~pI~~iDvt~DGkwilaT 636 (794)
T PF08553_consen 578 NNFSCFATTED--G-YIAVGSNKGDIRLYDRL-GKR-----AKTALPGLGDPIIGIDVTADGKWILAT 636 (794)
T ss_pred CCceEEEecCC--c-eEEEEeCCCcEEeeccc-chh-----hhhcCCCCCCCeeEEEecCCCcEEEEe
Confidence 34566666654 5 69999999999999932 221 1122333 7899999999999997655
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=94.39 E-value=1.3 Score=31.66 Aligned_cols=117 Identities=8% Similarity=-0.050 Sum_probs=65.5
Q ss_pred CCCeeeEEEccCCCccccee--------------EEEE----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEE
Q psy13207 74 PTLASCLTWNHSFSRFNSIS--------------IMYE----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTR 134 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~--------------~~~~----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d 134 (197)
+.+...-..+|+|++++..+ +.|. +..+- ..-.--+.++|+ .......+-+.+-.|.-||
T Consensus 108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~-~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~d 186 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIW-NCVGISNGLAWDSDAKKFYYIDSLNYEVDAYD 186 (310)
T ss_pred hcccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeee-hhccCCccccccccCcEEEEEccCceEEeeee
Confidence 66777888899999865442 2222 11111 111122567777 3333335566677777777
Q ss_pred --ccCCcccceeeeeeecCc----eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 135 --DVMGTRFDIETIGNFEDH----YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 135 --~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..++.-.+...+..++.. ....-.++..-+|++.++.=..++|...|..+++...++
T Consensus 187 yd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~ei 249 (310)
T KOG4499|consen 187 YDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEI 249 (310)
T ss_pred cCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEE
Confidence 444322223333333220 011123444667888888888899999999998765543
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=94.01 E-value=1 Score=35.12 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=21.6
Q ss_pred ecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCc
Q psy13207 154 CTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKR 186 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~ 186 (197)
.-|+.+..|.|.++|..++ .+|.|+-||+....
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~ 345 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDPF 345 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence 4578999999999998877 78999999997643
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.059 Score=45.11 Aligned_cols=103 Identities=16% Similarity=0.097 Sum_probs=62.0
Q ss_pred CCeeeEEEc----cCCCcccceeEEEE-------------eeEecccCCCceeEEEEc---CCCeEEEEeeCCCeEEEEE
Q psy13207 75 TLASCLTWN----HSFSRFNSISIMYE-------------AHSINAEHKDLIHDVAYD---YYGLRMATCSSDQNIKVTR 134 (197)
Q Consensus 75 ~~~~~~~~~----~~~~~~~~~~~~~~-------------~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~d~~i~~~d 134 (197)
..+..+.|- |.+..++..+.+|+ ++... .....+.-+.|. .+...+..+-.++.+++..
T Consensus 133 G~v~dl~fah~~~pk~~~~vg~lfVy~vd~l~G~iq~~l~v~~~~-p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~ 211 (1283)
T KOG1916|consen 133 GGVGDLQFAHTKCPKGRRLVGELFVYDVDVLQGEIQPQLEVTPIT-PYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLN 211 (1283)
T ss_pred CCcccccccccCChHHHHHhhhhheeehHhhccccccceEEeecC-cCCCCcceeeecccccccceeeeccCCCceeEee
Confidence 344445443 34444556678888 22222 344555556665 3444335555678888766
Q ss_pred ccCCcccceeeeeeecCceecEEEE-----------EEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 135 DVMGTRFDIETIGNFEDHYCTVWRV-----------SWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~h~~~v~~~-----------~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
... .....+.+|..++..+ ..+|||+.+++.+.||.++.|.+--
T Consensus 212 ~~r------a~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi 266 (1283)
T KOG1916|consen 212 INR------ALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYI 266 (1283)
T ss_pred ech------HHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeee
Confidence 543 1123345566555433 3789999999999999999987653
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=93.88 E-value=1.7 Score=35.66 Aligned_cols=116 Identities=11% Similarity=-0.004 Sum_probs=62.7
Q ss_pred cceeEEEECCCCCCcEEEEEe------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
..+...+++|+ |+.++..- .|+.-.||-...+.....+. . ......-.|+|+|..+...
T Consensus 350 ~~vsspaiSpd--G~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt-----~-g~~~t~PsWspDG~~lw~v------- 414 (591)
T PRK13616 350 GNITSAALSRS--GRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVL-----E-GHSLTRPSWSLDADAVWVV------- 414 (591)
T ss_pred cCcccceECCC--CCEEEEEEeecCCCCCcceEEEEEeCCCcceeee-----c-CCCCCCceECCCCCceEEE-------
Confidence 35778889998 87766554 24444455433222111111 1 2236778888887653221
Q ss_pred EecccCCCceeEEEEcCCCeEEEE-eeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 100 SINAEHKDLIHDVAYDYYGLRMAT-CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~~~~~~s-~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
.. ++.+.++. ....+.+.+.+++. ..... .....|..+.|||||..++... +|.|.
T Consensus 415 ----~d----------g~~~~~v~~~~~~gql~~~~vd~-----ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~ 471 (591)
T PRK13616 415 ----VD----------GNTVVRVIRDPATGQLARTPVDA-----SAVAS---RVPGPISELQLSRDGVRAAMII-GGKVY 471 (591)
T ss_pred ----ec----------CcceEEEeccCCCceEEEEeccC-----chhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEE
Confidence 00 11111122 22345666556653 22211 2245799999999999888766 46776
Q ss_pred E
Q psy13207 179 L 179 (197)
Q Consensus 179 i 179 (197)
+
T Consensus 472 V 472 (591)
T PRK13616 472 L 472 (591)
T ss_pred E
Confidence 6
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.14 Score=43.01 Aligned_cols=79 Identities=19% Similarity=0.175 Sum_probs=62.4
Q ss_pred eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
.+.+. .|....+|++|+ .+.+ +.|+..|.|++|++.+ +.......+|..+|+.+.=+.+|..+++.+.-.
T Consensus 1094 w~~fr-d~~~~fTc~afs~~~~hL--~vG~~~Geik~~nv~s-----G~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S 1165 (1516)
T KOG1832|consen 1094 WRSFR-DETALFTCIAFSGGTNHL--AVGSHAGEIKIFNVSS-----GSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSS 1165 (1516)
T ss_pred chhhh-ccccceeeEEeecCCceE--EeeeccceEEEEEccC-----ccccccccccccccccccccCCcceeeeecccc
Confidence 44555 677889999999 5556 9999999999999977 666777889999999999888998877765433
Q ss_pred --cEEEEEcCC
Q psy13207 176 --CVRLWKLKK 184 (197)
Q Consensus 176 --~i~iw~~~~ 184 (197)
-.-+|++..
T Consensus 1166 ~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1166 SPLSALWDASS 1176 (1516)
T ss_pred CchHHHhcccc
Confidence 356787754
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=93.11 E-value=2.2 Score=30.10 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=35.3
Q ss_pred EEeeCCCe-EEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 122 ATCSSDQN-IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 122 ~s~~~d~~-i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
..++.++. +.+ |.+++ +.+-... ...+.. ...+++..|+.++.++.+..||+++++.
T Consensus 177 ~~~~~~g~~~~~-d~~tg-----~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 177 YVSSGDGRVVAV-DLATG-----EKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKV 234 (238)
T ss_dssp EEECCTSSEEEE-ETTTT-----EEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTTTEE
T ss_pred EEEcCCCeEEEE-ECCCC-----CEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCCCCE
Confidence 66666665 455 88763 3222211 111222 1345678888888999999999999864
|
... |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=92.77 E-value=3.9 Score=32.05 Aligned_cols=47 Identities=21% Similarity=0.319 Sum_probs=38.8
Q ss_pred eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccccee
Q psy13207 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWC 66 (197)
Q Consensus 18 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 66 (197)
...|......+.++..+|. +++.|+...=|+|.++|+..+..++.|+
T Consensus 300 r~~l~D~~R~~~~i~~sP~--~~laA~tDslGRV~LiD~~~~~vvrmWK 346 (415)
T PF14655_consen 300 RFGLPDSKREGESICLSPS--GRLAAVTDSLGRVLLIDVARGIVVRMWK 346 (415)
T ss_pred EEeeccCCceEEEEEECCC--CCEEEEEcCCCcEEEEECCCChhhhhhc
Confidence 3456667778999999998 9888888777999999999987776665
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=92.72 E-value=4.6 Score=32.86 Aligned_cols=143 Identities=7% Similarity=0.069 Sum_probs=73.2
Q ss_pred CCcceeEEEECCCCCCcEEEEEe--CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCC-----cccce----
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCA--ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFS-----RFNSI---- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---- 92 (197)
.--+|..++|.-- .+.+.|.- ..|.+++=|.. . +..-+.|..+.|.|-+. +||..
T Consensus 18 AiHPvhGlaWTDG--kqVvLT~L~l~~gE~kfGds~---v---------iGqFEhV~GlsW~P~~~~~~paLLAVQHkkh 83 (671)
T PF15390_consen 18 AIHPVHGLAWTDG--KQVVLTDLQLHNGEPKFGDSK---V---------IGQFEHVHGLSWAPPCTADTPALLAVQHKKH 83 (671)
T ss_pred hhccccceEecCC--CEEEEEeeeeeCCccccCCcc---E---------eeccceeeeeeecCcccCCCCceEEEeccce
Confidence 3457889999642 34445542 33444332211 1 11135788999998643 34433
Q ss_pred eEEEEeeEec---------------ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 93 SIMYEAHSIN---------------AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 93 ~~~~~~~~~~---------------~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
+.+|.+..-. ....-.-.++.|+|..-.|+.-.....-.+++++.. .......++ -.+-|.
T Consensus 84 VtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d---~srVkaDi~-~~G~Ih 159 (671)
T PF15390_consen 84 VTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCD---SSRVKADIK-TSGLIH 159 (671)
T ss_pred EEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeC---CceEEEecc-CCceEE
Confidence 7889822110 001112245778843332233333333334555431 022222333 356799
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEEcCC
Q psy13207 158 RVSWNITGTIVASSGD-DGCVRLWKLKK 184 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~-dg~i~iw~~~~ 184 (197)
|.+|.+||+.|+.+-. .=.-++||-..
T Consensus 160 CACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 160 CACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred EEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 9999999988876542 23356777543
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.9 Score=36.84 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=27.0
Q ss_pred cEEEEEEcc----CCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 155 TVWRVSWNI----TGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 155 ~v~~~~~~p----~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
....+++++ +..++++.+.|+++++||+.++.++.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~ 254 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLA 254 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 455666666 67899999999999999999988743
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=92.44 E-value=2.6 Score=35.48 Aligned_cols=91 Identities=21% Similarity=0.296 Sum_probs=53.9
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccceeEEEEeeEecccC
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSISIMYEAHSINAEH 105 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (197)
.|..+.++|+ |.+|+-.|..|...+ .+... |.....++. +..+.|=.+.-+..++.. .+
T Consensus 86 ~v~~i~~n~~--g~~lal~G~~~v~V~-~LP~r-----~g~~~~~~~g~~~i~Crt~~v~~~~~~~------------~~ 145 (717)
T PF10168_consen 86 EVHQISLNPT--GSLLALVGPRGVVVL-ELPRR-----WGKNGEFEDGKKEINCRTVPVDERFFTS------------NS 145 (717)
T ss_pred eEEEEEECCC--CCEEEEEcCCcEEEE-Eeccc-----cCccccccCCCcceeEEEEEechhhccC------------CC
Confidence 6788899998 999988887655544 43210 111112221 233444333333322211 45
Q ss_pred CCceeEEEEcCC---CeEEEEeeCCCeEEEEEccC
Q psy13207 106 KDLIHDVAYDYY---GLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 106 ~~~i~~~~~~~~---~~~~~s~~~d~~i~~~d~~~ 137 (197)
...|..+.|+|. .-.|+.-..|+.+|+||+..
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 667899999922 23338888999999999864
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=92.40 E-value=1.4 Score=29.91 Aligned_cols=39 Identities=15% Similarity=0.312 Sum_probs=30.1
Q ss_pred ecEEEEEEccCC------CEEEEEeCCCcEEEEEcCC--Ccchhhhh
Q psy13207 154 CTVWRVSWNITG------TIVASSGDDGCVRLWKLKK--KRKKKKEE 192 (197)
Q Consensus 154 ~~v~~~~~~p~~------~~l~~~~~dg~i~iw~~~~--~~~~~~~~ 192 (197)
..+..++|||.| .+||+.+.++.|.||.... ..+|..+.
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~~~~~W~~v~ 132 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGNPQGEWNRVA 132 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCCccccEeeee
Confidence 378899999953 5889999999999998765 45565543
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.7 Score=22.43 Aligned_cols=28 Identities=11% Similarity=0.250 Sum_probs=18.8
Q ss_pred eecEEEEEEccCCCEEEEEe-CC--CcEEEE
Q psy13207 153 YCTVWRVSWNITGTIVASSG-DD--GCVRLW 180 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~-~d--g~i~iw 180 (197)
...-....|+|||+.|+-++ .+ |...||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34567889999998887665 44 565555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=92.04 E-value=4.9 Score=31.50 Aligned_cols=30 Identities=13% Similarity=0.322 Sum_probs=18.0
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAP 57 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 57 (197)
+++..++.||+ |+++|.-..+|++.+.+..
T Consensus 217 ~~i~~iavSpn--g~~iAl~t~~g~l~v~ssD 246 (410)
T PF04841_consen 217 GPIIKIAVSPN--GKFIALFTDSGNLWVVSSD 246 (410)
T ss_pred CCeEEEEECCC--CCEEEEEECCCCEEEEECc
Confidence 35666666666 6666666666666555543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=92.00 E-value=5.2 Score=31.72 Aligned_cols=127 Identities=10% Similarity=0.129 Sum_probs=62.4
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEEE--ee------------E
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE--AH------------S 100 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~------------~ 100 (197)
|.+|+..+. +.|.+||..+.+.++++.. .++..+.|++++.+++.. +.+++ .. .
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~v-------~~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~ 188 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRIDV-------SAVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDA 188 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEESS--------E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGG
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEec-------CCCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhc
Confidence 445555544 4788999888766544431 237889999999887544 44444 22 1
Q ss_pred ecccC--CCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 101 INAEH--KDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 101 ~~~~~--~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
+..-| ...|.+.+|.++.+ +=.+.. .++-+--. +...+..+ ..+++=+.+.|+.+.+.....|+.+.
T Consensus 189 f~~~~E~~~~IkSg~W~~d~f--iYtT~~-~lkYl~~G-----e~~~i~~l---d~~~yllgy~~~~~~ly~~Dr~~~v~ 257 (443)
T PF04053_consen 189 FELIHEISERIKSGCWVEDCF--IYTTSN-HLKYLVNG-----ETGIIAHL---DKPLYLLGYLPKENRLYLIDRDGNVI 257 (443)
T ss_dssp EEEEEEE-S--SEEEEETTEE--EEE-TT-EEEEEETT-----EEEEEEE----SS--EEEEEETTTTEEEEE-TT--EE
T ss_pred eEEEEEecceeEEEEEEcCEE--EEEcCC-eEEEEEcC-----CcceEEEc---CCceEEEEEEccCCEEEEEECCCCEE
Confidence 11112 45677777776643 322223 55442111 02223333 34566677777777888888888888
Q ss_pred EEEcCC
Q psy13207 179 LWKLKK 184 (197)
Q Consensus 179 iw~~~~ 184 (197)
.+.++.
T Consensus 258 ~~~ld~ 263 (443)
T PF04053_consen 258 SYELDL 263 (443)
T ss_dssp EEE--H
T ss_pred EEEECH
Confidence 887753
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.8 Score=34.49 Aligned_cols=61 Identities=8% Similarity=0.061 Sum_probs=38.8
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEE-eCCCcEEEEEcCCCcchhhhhhhhh
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASS-GDDGCVRLWKLKKKRKKKKEEEEEE 196 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~e 196 (197)
|-++|+.+ .+.+..+.. ..++.++..+.+.+ +|++. ..++.+.+||..+++....+++..+
T Consensus 271 VWv~D~~t-----~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~ 333 (342)
T PF06433_consen 271 VWVYDLKT-----HKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGE 333 (342)
T ss_dssp EEEEETTT-----TEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---SS
T ss_pred EEEEECCC-----CeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCC
Confidence 55566655 555655542 34677899998765 55444 4679999999999988887776543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=91.65 E-value=4.6 Score=31.27 Aligned_cols=64 Identities=8% Similarity=-0.016 Sum_probs=38.8
Q ss_pred cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 115 DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 115 ~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.++.+ ..++.++.+..+|..++ +.+-....-. ....+... .+.+++.++.||.+...|..+++.
T Consensus 293 ~~~~v--y~~~~~g~l~ald~~tG-----~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~ 357 (394)
T PRK11138 293 DGGRI--YLVDQNDRVYALDTRGG-----VELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRF 357 (394)
T ss_pred ECCEE--EEEcCCCeEEEEECCCC-----cEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 35566 67778999999998763 2221111000 11111122 255678888999999999988764
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=91.48 E-value=4.7 Score=30.16 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=66.9
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eE----
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SI---- 94 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---- 94 (197)
.-.+.+..+.-+++ |++++.++.-..+.-|+.-.. .|. .+......++..+.|.|++.....+ ++
T Consensus 142 ~~~gs~~~~~r~~d--G~~vavs~~G~~~~s~~~G~~----~w~-~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~ 214 (302)
T PF14870_consen 142 ETSGSINDITRSSD--GRYVAVSSRGNFYSSWDPGQT----TWQ-PHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDD 214 (302)
T ss_dssp S----EEEEEE-TT--S-EEEEETTSSEEEEE-TT-S----S-E-EEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-
T ss_pred CCcceeEeEEECCC--CcEEEEECcccEEEEecCCCc----cce-EEccCccceehhceecCCCCEEEEeCCcEEEEccC
Confidence 44567888888888 988888766656666775431 122 1222236789999999998764322 22
Q ss_pred -----EEEeeEecc-cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 95 -----MYEAHSINA-EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 95 -----~~~~~~~~~-~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
-|....... .....+..++|. ++.+ .+++..|.+.+ ..+.++.+ +.......-...++.+.|.++.+-
T Consensus 215 ~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~--wa~gg~G~l~~-S~DgGktW--~~~~~~~~~~~n~~~i~f~~~~~g 289 (302)
T PF14870_consen 215 PDDGETWSEPIIPIKTNGYGILDLAYRPPNEI--WAVGGSGTLLV-STDGGKTW--QKDRVGENVPSNLYRIVFVNPDKG 289 (302)
T ss_dssp TTEEEEE---B-TTSS--S-EEEEEESSSS-E--EEEESTT-EEE-ESSTTSS---EE-GGGTTSSS---EEEEEETTEE
T ss_pred CCCccccccccCCcccCceeeEEEEecCCCCE--EEEeCCccEEE-eCCCCccc--eECccccCCCCceEEEEEcCCCce
Confidence 222111110 233457889998 5555 44555554432 23323222 222222223445788899866555
Q ss_pred EEEEeCCCcEEEE
Q psy13207 168 VASSGDDGCVRLW 180 (197)
Q Consensus 168 l~~~~~dg~i~iw 180 (197)
++.| .+|.+.-|
T Consensus 290 f~lG-~~G~ll~~ 301 (302)
T PF14870_consen 290 FVLG-QDGVLLRY 301 (302)
T ss_dssp EEE--STTEEEEE
T ss_pred EEEC-CCcEEEEe
Confidence 5554 67887655
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=91.39 E-value=4.3 Score=29.60 Aligned_cols=131 Identities=11% Similarity=0.081 Sum_probs=70.5
Q ss_pred ceeeeeeeecC-CCcceeEEEECCCCCCcEEEEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc
Q psy13207 13 NQWTRRSNLVD-SRTSVTDVKFGPKQLGLVLATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 13 ~~w~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (197)
..+++..++.. ...-...+.|..+ |.++-+.+.-| .|+.+|+.+++.+....+... ++
T Consensus 31 ~~~~vv~~ypHd~~aFTQGL~~~~~--g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~-----------------~F 91 (264)
T PF05096_consen 31 YSYEVVETYPHDPTAFTQGLEFLDD--GTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPR-----------------YF 91 (264)
T ss_dssp EEEEEEEEEE--TT-EEEEEEEEET--TEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT-------------------
T ss_pred eeeEEEEECCCCCcccCccEEecCC--CEEEEeCCCCCcEEEEEEECCCCcEEEEEECCcc-----------------cc
Confidence 34555555542 2344668888776 88888888766 788889888765433322211 11
Q ss_pred cceeEEEEeeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE
Q psy13207 90 NSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 169 (197)
+-++. .+...+..+. -.++...+||..+ .+.+..+.- ...=+.++ .|++.|+
T Consensus 92 gEGit---------~~~d~l~qLT-----------Wk~~~~f~yd~~t-----l~~~~~~~y-~~EGWGLt--~dg~~Li 143 (264)
T PF05096_consen 92 GEGIT---------ILGDKLYQLT-----------WKEGTGFVYDPNT-----LKKIGTFPY-PGEGWGLT--SDGKRLI 143 (264)
T ss_dssp EEEEE---------EETTEEEEEE-----------SSSSEEEEEETTT-----TEEEEEEE--SSS--EEE--ECSSCEE
T ss_pred ceeEE---------EECCEEEEEE-----------ecCCeEEEEcccc-----ceEEEEEec-CCcceEEE--cCCCEEE
Confidence 11110 1223333333 3567778999876 344444432 23446777 3566666
Q ss_pred EEeCCCcEEEEEcCCCcchhh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+.....++.+|..+.+....
T Consensus 144 ~SDGS~~L~~~dP~~f~~~~~ 164 (264)
T PF05096_consen 144 MSDGSSRLYFLDPETFKEVRT 164 (264)
T ss_dssp EE-SSSEEEEE-TTT-SEEEE
T ss_pred EECCccceEEECCcccceEEE
Confidence 665567889899877654433
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=91.29 E-value=1.3 Score=35.78 Aligned_cols=63 Identities=14% Similarity=0.270 Sum_probs=44.1
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEE
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE 97 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 97 (197)
..+-|+|. ...|+.-.....-.+++++.... .....+.....|.|.+|.+||..|+.+ .++||
T Consensus 116 QGCVWHPk--~~iL~VLT~~dvSV~~sV~~d~s----rVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 116 QGCVWHPK--KAILTVLTARDVSVLPSVHCDSS----RVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred CcccccCC--CceEEEEecCceeEeeeeeeCCc----eEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 35778997 77776655555555677664432 223445557889999999999998766 49999
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=91.06 E-value=4.1 Score=32.15 Aligned_cols=119 Identities=11% Similarity=0.110 Sum_probs=68.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (197)
..++|.+++|++| .+.||.--.|.+|.+++....+......... .
T Consensus 65 d~G~I~SIkFSlD--nkilAVQR~~~~v~f~nf~~d~~~l~~~~~c--k------------------------------- 109 (657)
T KOG2377|consen 65 DKGEIKSIKFSLD--NKILAVQRTSKTVDFCNFIPDNSQLEYTQEC--K------------------------------- 109 (657)
T ss_pred CCCceeEEEeccC--cceEEEEecCceEEEEecCCCchhhHHHHHh--c-------------------------------
Confidence 4568999999999 8999999999999999875443322111110 0
Q ss_pred cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe--CCCcEEEE
Q psy13207 104 EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG--DDGCVRLW 180 (197)
Q Consensus 104 ~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~--~dg~i~iw 180 (197)
.....|.+..|. ...+ +--+ +.-+-+|..... ...++..+.|+..|+=..|+|+-+.++.++ ..+++.-+
T Consensus 110 ~k~~~IlGF~W~~s~e~--A~i~-~~G~e~y~v~pe----krslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf 182 (657)
T KOG2377|consen 110 TKNANILGFCWTSSTEI--AFIT-DQGIEFYQVLPE----KRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPF 182 (657)
T ss_pred cCcceeEEEEEecCeeE--EEEe-cCCeEEEEEchh----hhhhhhhhhcccCccEEEEccccceEeeeccccccccccE
Confidence 223346666666 4344 2222 223455554321 233444556666777788888766443332 34555555
Q ss_pred EcCC
Q psy13207 181 KLKK 184 (197)
Q Consensus 181 ~~~~ 184 (197)
.+++
T Consensus 183 ~~~~ 186 (657)
T KOG2377|consen 183 HFRA 186 (657)
T ss_pred EEee
Confidence 5554
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=91.04 E-value=6.4 Score=30.93 Aligned_cols=136 Identities=10% Similarity=0.068 Sum_probs=73.0
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc---CCC--cccc----eeEEEEeeEecc------
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH---SFS--RFNS----ISIMYEAHSINA------ 103 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~----~~~~~~~~~~~~------ 103 (197)
...++.||.+|.++||+......... .+.-..+-+.+|-.+..-+ ... .|+. .+.+|.+.....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~-~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPE-DLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCc-cEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 57899999999999999854432111 1111112245555554432 222 2221 145555221110
Q ss_pred --------cCCC--ceeEE---EEc----CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 104 --------EHKD--LIHDV---AYD----YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 104 --------~~~~--~i~~~---~~~----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
.|.= ....+ .|- .+.+ ..=+.||.+.+|+-+. ......+.. .--...++++|.-.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~I--cVQS~DG~L~~feqe~-----~~f~~~lp~-~llPgPl~Y~~~tD 187 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFI--CVQSMDGSLSFFEQES-----FAFSRFLPD-FLLPGPLCYCPRTD 187 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEE--EEEecCceEEEEeCCc-----EEEEEEcCC-CCCCcCeEEeecCC
Confidence 1111 11111 111 1334 7788999999999764 111222222 11224478888888
Q ss_pred EEEEEeCCCcEEEEEcC
Q psy13207 167 IVASSGDDGCVRLWKLK 183 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~ 183 (197)
.|++++.+..+..|.+.
T Consensus 188 sfvt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 188 SFVTASSSWTLECYKYQ 204 (418)
T ss_pred EEEEecCceeEEEecHH
Confidence 89999988888888764
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=90.26 E-value=4.8 Score=32.29 Aligned_cols=60 Identities=8% Similarity=0.029 Sum_probs=45.2
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..++ +.++..|-|++||.-. ...-..+.+....|..+..+.+|+++++.|. ..+.+-|++
T Consensus 573 sGyI--a~as~kGDirLyDRig-----~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 573 SGYI--AAASRKGDIRLYDRIG-----KRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred CceE--EEecCCCceeeehhhc-----chhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 5567 9999999999999732 2223345566778999999999998888775 477777765
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.14 E-value=6.1 Score=29.27 Aligned_cols=153 Identities=10% Similarity=0.059 Sum_probs=80.6
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
+.+-...|.++.|+|+ .+.|++......-.++=...++.+.+..+.. -.....+.+...+.+.++- +.+
T Consensus 81 i~g~~~nvS~LTynp~--~rtLFav~n~p~~iVElt~~GdlirtiPL~g----~~DpE~Ieyig~n~fvi~dER~~~l~~ 154 (316)
T COG3204 81 ILGETANVSSLTYNPD--TRTLFAVTNKPAAIVELTKEGDLIRTIPLTG----FSDPETIEYIGGNQFVIVDERDRALYL 154 (316)
T ss_pred cccccccccceeeCCC--cceEEEecCCCceEEEEecCCceEEEecccc----cCChhHeEEecCCEEEEEehhcceEEE
Confidence 3444556999999998 7677777666666676666666555444322 1223344444444443221 111
Q ss_pred EE----------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------
Q psy13207 96 YE----------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH------- 152 (197)
Q Consensus 96 ~~----------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h------- 152 (197)
+. +.... ..+.....++|.+..-+|..+-+-+-+.+|....... .-.+.....+
T Consensus 155 ~~vd~~t~~~~~~~~~i~L~~~~-k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~--~l~~~~~~~~~~~~~~f 231 (316)
T COG3204 155 FTVDADTTVISAKVQKIPLGTTN-KKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPS--SLSVHASLDPTADRDLF 231 (316)
T ss_pred EEEcCCccEEeccceEEeccccC-CCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCc--ccccccccCcccccceE
Confidence 11 22222 2266788999993333336666666667766542100 0011111111
Q ss_pred eecEEEEEEcc-CCCEEEEEeCCCcEEEEEc
Q psy13207 153 YCTVWRVSWNI-TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 153 ~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~ 182 (197)
-..|.++.|++ .+.+|+-+..++.+.-.|.
T Consensus 232 ~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~ 262 (316)
T COG3204 232 VLDVSGLEFNAITNSLLVLSDESRRLLEVDL 262 (316)
T ss_pred eeccccceecCCCCcEEEEecCCceEEEEec
Confidence 23567788887 4556665656655555554
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=89.40 E-value=8.4 Score=32.39 Aligned_cols=76 Identities=11% Similarity=0.098 Sum_probs=48.8
Q ss_pred ceeEEEEc--CCCeEEEEeeCCCeEEEEEccCC-----cc---c-------ceeeeeeecCceecEEEEEEc--cCCCEE
Q psy13207 108 LIHDVAYD--YYGLRMATCSSDQNIKVTRDVMG-----TR---F-------DIETIGNFEDHYCTVWRVSWN--ITGTIV 168 (197)
Q Consensus 108 ~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~-----~~---~-------~~~~~~~~~~h~~~v~~~~~~--p~~~~l 168 (197)
.|+.+... ++.-.|+.|.+||.|.+|..+.- .. . ...+...+. -....|+++++ ...++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence 35555544 33333488999999999976431 00 0 001122222 23478999998 788999
Q ss_pred EEEeCCCcEEEEEcCC
Q psy13207 169 ASSGDDGCVRLWKLKK 184 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~ 184 (197)
|.++....|.||-+..
T Consensus 181 AVSsNs~~VTVFaf~l 196 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFAL 196 (717)
T ss_pred EEecCCceEEEEEEec
Confidence 9999889999987655
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=89.16 E-value=9.1 Score=29.82 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=62.9
Q ss_pred cceeEEEECCCCCCcEEEEE-eCCC----cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeE
Q psy13207 26 TSVTDVKFGPKQLGLVLATC-AADG----LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~-~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (197)
..+....++|+ |+++|-+ +..| +++++|+.+++.+.. .+.. .....+.|.++++.+..
T Consensus 124 ~~~~~~~~Spd--g~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d-----~i~~-~~~~~~~W~~d~~~~~y--------- 186 (414)
T PF02897_consen 124 VSLGGFSVSPD--GKRLAYSLSDGGSEWYTLRVFDLETGKFLPD-----GIEN-PKFSSVSWSDDGKGFFY--------- 186 (414)
T ss_dssp EEEEEEEETTT--SSEEEEEEEETTSSEEEEEEEETTTTEEEEE-----EEEE-EESEEEEECTTSSEEEE---------
T ss_pred EEeeeeeECCC--CCEEEEEecCCCCceEEEEEEECCCCcCcCC-----cccc-cccceEEEeCCCCEEEE---------
Confidence 34457889998 8777644 4444 599999998854321 1110 01122666666543211
Q ss_pred ecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC----C
Q psy13207 101 INAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD----G 175 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g 175 (197)
..+. .... ...+....|+.|.+.+.... ..++............+..++|+++|+..+.. .
T Consensus 187 -----------~~~~~~~~~--~~~~~~~~v~~~~~gt~~~~-d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s 252 (414)
T PF02897_consen 187 -----------TRFDEDQRT--SDSGYPRQVYRHKLGTPQSE-DELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSES 252 (414)
T ss_dssp -----------EECSTTTSS---CCGCCEEEEEEETTS-GGG--EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEE
T ss_pred -----------EEeCccccc--ccCCCCcEEEEEECCCChHh-CeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCC
Confidence 1111 0000 01112345677777552111 12343333222235678888888887654322 2
Q ss_pred cEEEEEcCCC
Q psy13207 176 CVRLWKLKKK 185 (197)
Q Consensus 176 ~i~iw~~~~~ 185 (197)
.+.+.++...
T Consensus 253 ~v~~~d~~~~ 262 (414)
T PF02897_consen 253 EVYLLDLDDG 262 (414)
T ss_dssp EEEEEECCCT
T ss_pred eEEEEecccc
Confidence 3666677653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=88.72 E-value=7.6 Score=28.39 Aligned_cols=45 Identities=11% Similarity=-0.166 Sum_probs=28.4
Q ss_pred EEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 112 VAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 112 ~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
+++++..+ ..|+.|+..+..|.++ ..++...+.......+-+..|
T Consensus 101 ~d~~~glI--ycgshd~~~yalD~~~-----~~cVykskcgG~~f~sP~i~~ 145 (354)
T KOG4649|consen 101 CDFDGGLI--YCGSHDGNFYALDPKT-----YGCVYKSKCGGGTFVSPVIAP 145 (354)
T ss_pred EcCCCceE--EEecCCCcEEEecccc-----cceEEecccCCceeccceecC
Confidence 44556677 8999999999999976 455554443223233344455
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=88.59 E-value=2.2 Score=37.33 Aligned_cols=69 Identities=13% Similarity=0.116 Sum_probs=48.8
Q ss_pred eeEEEEc---CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 109 IHDVAYD---YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 109 i~~~~~~---~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
..++.|+ +... +.+..|+.|++..+... ...+..+. -....++++|+|.|+.++.|-..|++.=|...-
T Consensus 158 ~~~~~wnP~vp~n~--av~l~dlsl~V~~~~~~----~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l 229 (1405)
T KOG3630|consen 158 QLKNVWNPLVPLNS--AVDLSDLSLRVKSTKQL----AQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL 229 (1405)
T ss_pred cccccccCCccchh--hhhccccchhhhhhhhh----hhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeeccc
Confidence 4566777 4555 78889999998877531 11122221 245679999999999999999999998886543
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=88.14 E-value=6.2 Score=31.11 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=33.8
Q ss_pred cceeEEEECCCCCCcE-EEEEeCCCcEEEEE--cCCcccccceeccceecc-CCCeeeEEEccCCCcccc
Q psy13207 26 TSVTDVKFGPKQLGLV-LATCAADGLVRIYE--APDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~-l~s~~~dg~v~iw~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 91 (197)
+.-..-+|+|+ |+. +++...||...||- +.... +.. +.. ...-..-.|+|+|+.++-
T Consensus 238 g~~~~P~fspD--G~~l~f~~~rdg~~~iy~~dl~~~~-~~~------Lt~~~gi~~~Ps~spdG~~ivf 298 (425)
T COG0823 238 GNNGAPAFSPD--GSKLAFSSSRDGSPDIYLMDLDGKN-LPR------LTNGFGINTSPSWSPDGSKIVF 298 (425)
T ss_pred CccCCccCCCC--CCEEEEEECCCCCccEEEEcCCCCc-cee------cccCCccccCccCCCCCCEEEE
Confidence 34455689998 655 45667788766664 44433 111 111 222337789999998753
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=88.11 E-value=1.2 Score=36.23 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=26.9
Q ss_pred cceeEEEECC----CCCCcEEEEEeCCCcEEEEEcCCcccccce
Q psy13207 26 TSVTDVKFGP----KQLGLVLATCAADGLVRIYEAPDVMNLSQW 65 (197)
Q Consensus 26 ~~v~~~~~~~----~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 65 (197)
+.+..+...+ + ..+|++.+.|+++|+||+.++..+...
T Consensus 215 ~~~~~~~~~~~~~~~--~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 215 SVAASLAVSSSEIND--DTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp --EEEEEE-----ET--TTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CccceEEEecceeCC--CCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 3445555555 4 678999999999999999998875443
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=87.44 E-value=14 Score=32.09 Aligned_cols=59 Identities=8% Similarity=0.038 Sum_probs=45.5
Q ss_pred EEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 122 ATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+.++-...|++|+..+ .+.++.-..+..++..+...-.|..++.|..-+++.+..++..
T Consensus 842 llA~In~~vrLye~t~-----~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~ 900 (1096)
T KOG1897|consen 842 LLAGINQSVRLYEWTT-----ERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGD 900 (1096)
T ss_pred EEEecCcEEEEEEccc-----cceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEecc
Confidence 3456677899999865 4455555667788888888889999999998889888776543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=87.27 E-value=14 Score=29.91 Aligned_cols=28 Identities=14% Similarity=0.119 Sum_probs=19.2
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCcchhhhh
Q psy13207 164 TGTIVASSGDD-----GCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 164 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~ 192 (197)
++++++.|+.+ ..+.+||..+ +.|..+.
T Consensus 487 ~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~ 519 (534)
T PHA03098 487 NNKIYVVGGDKYEYYINEIEVYDDKT-NTWTLFC 519 (534)
T ss_pred CCEEEEEcCCcCCcccceeEEEeCCC-CEEEecC
Confidence 67777777754 4688899875 4566544
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=87.13 E-value=3.3 Score=29.36 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=21.1
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccc
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNL 62 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~ 62 (197)
+.+|++.+.+|.+++||+.+.+..
T Consensus 22 ~~~Ll~iT~~G~l~vWnl~~~k~~ 45 (219)
T PF07569_consen 22 GSYLLAITSSGLLYVWNLKKGKAV 45 (219)
T ss_pred CCEEEEEeCCCeEEEEECCCCeec
Confidence 778999999999999999987654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=86.99 E-value=15 Score=29.79 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=53.6
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccceeEEEEeeEecccC
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSISIMYEAHSINAEH 105 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (197)
.|..+..++. |..++-.+.+|.+.++-.+. |.....++. +..|.|=.+.-+.+++.. ..
T Consensus 105 eV~~vl~s~~--GS~VaL~G~~Gi~vMeLp~r------wG~~s~~eDgk~~v~CRt~~i~~~~fts------------s~ 164 (741)
T KOG4460|consen 105 EVYQVLLSPT--GSHVALIGIKGLMVMELPKR------WGKNSEFEDGKSTVNCRTTPVAERFFTS------------ST 164 (741)
T ss_pred EEEEEEecCC--CceEEEecCCeeEEEEchhh------cCccceecCCCceEEEEeecccceeecc------------CC
Confidence 5667778888 88888888888877654332 222333333 233455444433333211 22
Q ss_pred CCceeEEEEcCCC---eEEEEeeCCCeEEEEEccC
Q psy13207 106 KDLIHDVAYDYYG---LRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 106 ~~~i~~~~~~~~~---~~~~s~~~d~~i~~~d~~~ 137 (197)
.-.+...+|+|+- -.|..-+.|..||+||...
T Consensus 165 ~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~ 199 (741)
T KOG4460|consen 165 SLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSE 199 (741)
T ss_pred ceeeeeccccCCccCCceEEEEecCcEEEEEecCC
Confidence 2346677888332 1226677899999999864
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=86.83 E-value=18 Score=30.69 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=29.4
Q ss_pred ceecEEEEEEccC---CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 152 HYCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 152 h~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+...|..+.|+|. +..|+.-..|+++++||+....
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 3567899999996 5888888999999999997644
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=86.73 E-value=16 Score=30.05 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=38.9
Q ss_pred EEEcCCCeEEEEeeCC------CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCc-----EEEE
Q psy13207 112 VAYDYYGLRMATCSSD------QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC-----VRLW 180 (197)
Q Consensus 112 ~~~~~~~~~~~s~~~d------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~-----i~iw 180 (197)
+.+.+... +.|+.+ ..+..||..+++ ...+..+..-..... ++. -++.+.+.|+.|+. |..|
T Consensus 424 ~~~~g~iY--i~GG~~~~~~~l~sve~YDP~t~~---W~~~~~M~~~R~~~g-~a~-~~~~iYvvGG~~~~~~~~~VE~y 496 (571)
T KOG4441|consen 424 AVLGGKLY--IIGGGDGSSNCLNSVECYDPETNT---WTLIAPMNTRRSGFG-VAV-LNGKIYVVGGFDGTSALSSVERY 496 (571)
T ss_pred EEECCEEE--EEcCcCCCccccceEEEEcCCCCc---eeecCCcccccccce-EEE-ECCEEEEECCccCCCccceEEEE
Confidence 33335555 777754 345678877643 333333332222222 222 26778888887763 6778
Q ss_pred EcCCCcchhhh
Q psy13207 181 KLKKKRKKKKE 191 (197)
Q Consensus 181 ~~~~~~~~~~~ 191 (197)
|..+ .+|..+
T Consensus 497 dp~~-~~W~~v 506 (571)
T KOG4441|consen 497 DPET-NQWTMV 506 (571)
T ss_pred cCCC-CceeEc
Confidence 8765 345544
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.43 E-value=17 Score=29.87 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=30.8
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC------CcEEEEEcCCCcchhhhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD------GCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~ 193 (197)
.+..||.++.+ ...+..+....... +++ .-++++.+.|+.+ ..+..||..+..+|..+..
T Consensus 433 ~ve~YDP~td~---W~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~ 498 (557)
T PHA02713 433 KVIRYDTVNNI---WETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITT 498 (557)
T ss_pred eEEEECCCCCe---EeecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccc
Confidence 46678876532 23333332211111 122 2256777777654 2467788887446766544
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=86.02 E-value=17 Score=30.65 Aligned_cols=136 Identities=18% Similarity=0.135 Sum_probs=72.0
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-ccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccC
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-LSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEH 105 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (197)
.|+-+...--+..+.|+.|..||.|.+|.+.+--. +.... ... +.....+...|.- .+ .-
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~--~~~--~~~~~r~~i~P~f-------------~~--~v 162 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFS--EDN--DSGFSRLKIKPFF-------------HL--RV 162 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhc--ccc--ccccccccCCCCe-------------Ee--ec
Confidence 35555554432257899999999999998754210 00000 000 0000001111110 00 23
Q ss_pred CCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC---C---EEEEEeCCCcE
Q psy13207 106 KDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG---T---IVASSGDDGCV 177 (197)
Q Consensus 106 ~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~---~---~l~~~~~dg~i 177 (197)
...+.+++++ ...-++|.++....|.||-...... ......-..|..-|.+|+|-++. . .+++++-.|.+
T Consensus 163 ~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~--r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v 240 (717)
T PF08728_consen 163 GASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDE--RFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEV 240 (717)
T ss_pred CCceeEEEEEecCcceEEEEecCCceEEEEEEecccc--ccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcE
Confidence 3467788876 3222337777778888876543100 00010011245678889997743 2 78888899999
Q ss_pred EEEEcC
Q psy13207 178 RLWKLK 183 (197)
Q Consensus 178 ~iw~~~ 183 (197)
.+|++.
T Consensus 241 ~~~~I~ 246 (717)
T PF08728_consen 241 WTFKIK 246 (717)
T ss_pred EEEEEE
Confidence 998883
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.94 E-value=13 Score=27.99 Aligned_cols=85 Identities=9% Similarity=0.003 Sum_probs=47.7
Q ss_pred cCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccC--CcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-cEEE
Q psy13207 104 EHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVM--GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-CVRL 179 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~--~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-~i~i 179 (197)
.+-..-+.|+|+|+. .++++=+..+.|.-|+... ...........+....+..-.++...+|.+.+++..+| .|..
T Consensus 160 ~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~ 239 (307)
T COG3386 160 DDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVR 239 (307)
T ss_pred CcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEE
Confidence 334456789999544 3335555568888877652 11111111222222344455677777888776544444 8888
Q ss_pred EEcCCCcchh
Q psy13207 180 WKLKKKRKKK 189 (197)
Q Consensus 180 w~~~~~~~~~ 189 (197)
|+.. ++...
T Consensus 240 ~~pd-G~l~~ 248 (307)
T COG3386 240 FNPD-GKLLG 248 (307)
T ss_pred ECCC-CcEEE
Confidence 9887 55443
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=85.05 E-value=13 Score=31.01 Aligned_cols=48 Identities=17% Similarity=0.297 Sum_probs=36.6
Q ss_pred ccccceeeeeee-------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC
Q psy13207 9 EKCLNQWTRRSN-------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP 57 (197)
Q Consensus 9 ~~~~~~w~~~~~-------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~ 57 (197)
..++.+|+.... + ...+.|.++.|...++++.+++.+..+.|.++...
T Consensus 50 ~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~ 104 (631)
T PF12234_consen 50 RSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQL 104 (631)
T ss_pred CCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEcc
Confidence 446678876532 2 34678999999765559999999999999999753
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=84.55 E-value=21 Score=30.19 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=29.7
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
.+.+..+..||++++|+--..+|.|.+-+....+..-
T Consensus 216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lc 252 (829)
T KOG2280|consen 216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILC 252 (829)
T ss_pred CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhh
Confidence 3567889999999999999999999988776655443
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=84.55 E-value=1.2 Score=37.87 Aligned_cols=49 Identities=24% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccccccceeeeee----eecCCCcceeEEEE-----------CCCCCCcEEEEEeCCCcEEEEEcC
Q psy13207 7 QSEKCLNQWTRRS----NLVDSRTSVTDVKF-----------GPKQLGLVLATCAADGLVRIYEAP 57 (197)
Q Consensus 7 ~~~~~~~~w~~~~----~~~~h~~~v~~~~~-----------~~~~~~~~l~s~~~dg~v~iw~~~ 57 (197)
.+++++++..... .+.+|...+..++| +|| |+.|+.++.||.+++|.+.
T Consensus 202 ~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpD--Gtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 202 LKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPD--GTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred cCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCC--CcEEEEeecCCccceeeee
Confidence 3445555443322 25567776666544 677 8888888888888888764
|
|
| >PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=84.30 E-value=2.7 Score=18.81 Aligned_cols=25 Identities=16% Similarity=0.266 Sum_probs=16.0
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 156 VWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
...++++++|+++++-+....|.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 3566777777777666666666553
|
For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=84.23 E-value=15 Score=27.49 Aligned_cols=116 Identities=13% Similarity=0.106 Sum_probs=56.4
Q ss_pred CCCeeeEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEcc-CCccc
Q psy13207 74 PTLASCLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDV-MGTRF 141 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~-~~~~~ 141 (197)
...+..+.-++++++++.+ ...|+ -......-...|..+.|.++ .+ ....+.|.|+.=+.. ....+
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~l--w~~~~Gg~~~~s~~~~~~~~w 221 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNL--WMLARGGQIQFSDDPDDGETW 221 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-E--EEEETTTEEEEEE-TTEEEEE
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCE--EEEeCCcEEEEccCCCCcccc
Confidence 4556777778888887665 34455 11111123578999999933 44 234488888877621 11111
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
. +.+.......-.+..++|.+++...++|+. |. .+...+.++.|++....
T Consensus 222 ~-~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~-l~~S~DgGktW~~~~~~ 271 (302)
T PF14870_consen 222 S-EPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GT-LLVSTDGGKTWQKDRVG 271 (302)
T ss_dssp ----B-TTSS--S-EEEEEESSSS-EEEEEST-T--EEEESSTTSS-EE-GGG
T ss_pred c-cccCCcccCceeeEEEEecCCCCEEEEeCC-cc-EEEeCCCCccceECccc
Confidence 1 111122222334789999999888776654 43 34566777778776543
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=83.72 E-value=14 Score=26.65 Aligned_cols=50 Identities=2% Similarity=-0.164 Sum_probs=37.6
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-CCCEEEEEe
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSG 172 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~ 172 (197)
+++. +++-.-++|..+|..+ ++.+.++.-....|++++|-- +-..|++.+
T Consensus 223 G~L~--Va~~ng~~V~~~dp~t-----GK~L~eiklPt~qitsccFgGkn~d~~yvT~ 273 (310)
T KOG4499|consen 223 GNLY--VATFNGGTVQKVDPTT-----GKILLEIKLPTPQITSCCFGGKNLDILYVTT 273 (310)
T ss_pred CcEE--EEEecCcEEEEECCCC-----CcEEEEEEcCCCceEEEEecCCCccEEEEEe
Confidence 5666 8888889999999977 777777777788899999963 334555443
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=83.31 E-value=25 Score=29.19 Aligned_cols=143 Identities=15% Similarity=0.090 Sum_probs=67.9
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCc-EEEEEcCCcccccceeccc-ee--ccCCCeeeEEEccCCCcccce--eEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGL-VRIYEAPDVMNLSQWCLQH-EV--ACPTLASCLTWNHSFSRFNSI--SIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~-v~iw~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~--- 97 (197)
....-.|+|+ |..+++.+.... +++.+-.....+....... .. ..+..|..+.|+|||..++.. -++|=
T Consensus 398 ~~t~PsWspD--G~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~~g~v~Va~V 475 (591)
T PRK13616 398 SLTRPSWSLD--ADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMIIGGKVYLAVV 475 (591)
T ss_pred CCCCceECCC--CCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEECCEEEEEEE
Confidence 3778899998 887777653312 2222211111110000000 00 114579999999999987543 12222
Q ss_pred ------------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ceecEEEEEEc
Q psy13207 98 ------------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HYCTVWRVSWN 162 (197)
Q Consensus 98 ------------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~~~v~~~~~~ 162 (197)
...+.......+..+.|. ...+ +.+..++...+|.+.-. +.....+.+ ....+..++=+
T Consensus 476 vr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L--~V~~~~~~~~v~~v~vD----G~~~~~~~~~n~~~~v~~vaa~ 549 (591)
T PRK13616 476 EQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSL--VVGRSDPEHPVWYVNLD----GSNSDALPSRNLSAPVVAVAAS 549 (591)
T ss_pred EeCCCCceeecccEEeecccCCccccceEecCCEE--EEEecCCCCceEEEecC----CccccccCCCCccCceEEEecC
Confidence 111221222335778888 4445 44444444445544321 221111122 24566777777
Q ss_pred cCCCEEEEEeCCCcEEE
Q psy13207 163 ITGTIVASSGDDGCVRL 179 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~i 179 (197)
++ .++....+|.+.+
T Consensus 550 ~~--~iyv~~~~g~~~l 564 (591)
T PRK13616 550 PS--TVYVTDARAVLQL 564 (591)
T ss_pred Cc--eEEEEcCCceEEe
Confidence 63 3455555664443
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=83.03 E-value=18 Score=27.51 Aligned_cols=146 Identities=10% Similarity=0.091 Sum_probs=79.0
Q ss_pred EEECCCCCCcEEEEE----------eCCCcEEEEEcCCcccccceeccce--eccCCCeeeEEEccCCCccc-------c
Q psy13207 31 VKFGPKQLGLVLATC----------AADGLVRIYEAPDVMNLSQWCLQHE--VACPTLASCLTWNHSFSRFN-------S 91 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~----------~~dg~v~iw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~ 91 (197)
+..+|+ ++.+.++ -..-.|.+||..+.....+..+... .........+.++.+++++. .
T Consensus 41 ~~~spd--gk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~ 118 (342)
T PF06433_consen 41 VALSPD--GKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT 118 (342)
T ss_dssp EEE-TT--SSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred eeECCC--CCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence 557888 7777664 2455899999998765544443321 11122345568888888853 3
Q ss_pred eeEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCC-cccceeeeeeecCceecE-EEEEE
Q psy13207 92 ISIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMG-TRFDIETIGNFEDHYCTV-WRVSW 161 (197)
Q Consensus 92 ~~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~-~~~~~~~~~~~~~h~~~v-~~~~~ 161 (197)
++.+-| +..+. ...+. +.|- ++.+ .+-|.||.+.-..+... +.. ......+..-..++ ..-++
T Consensus 119 SVtVVDl~~~kvv~ei~---~PGC~-~iyP~~~~~F--~~lC~DGsl~~v~Ld~~Gk~~-~~~t~~F~~~~dp~f~~~~~ 191 (342)
T PF06433_consen 119 SVTVVDLAAKKVVGEID---TPGCW-LIYPSGNRGF--SMLCGDGSLLTVTLDADGKEA-QKSTKVFDPDDDPLFEHPAY 191 (342)
T ss_dssp EEEEEETTTTEEEEEEE---GTSEE-EEEEEETTEE--EEEETTSCEEEEEETSTSSEE-EEEEEESSTTTS-B-S--EE
T ss_pred eEEEEECCCCceeeeec---CCCEE-EEEecCCCce--EEEecCCceEEEEECCCCCEe-EeeccccCCCCcccccccce
Confidence 355555 22222 11111 1222 5666 89999999988888642 211 11112232223333 34455
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...+..++--+.+|.|+--|+...
T Consensus 192 ~~~~~~~~F~Sy~G~v~~~dlsg~ 215 (342)
T PF06433_consen 192 SRDGGRLYFVSYEGNVYSADLSGD 215 (342)
T ss_dssp ETTTTEEEEEBTTSEEEEEEETTS
T ss_pred ECCCCeEEEEecCCEEEEEeccCC
Confidence 555555666788999988888654
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=82.80 E-value=6.5 Score=27.70 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=38.4
Q ss_pred EEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 111 DVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 111 ~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
.++-.+ +.+ +.+...+.|.+|++.+ .....+..+..- +.|..+.++..|+||+|-=
T Consensus 22 ~~c~~g~d~L--fva~~g~~Vev~~l~~---~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 22 AVCCGGPDAL--FVAASGCKVEVYDLEQ---EECPLLCTFSTV-GRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred eeeccCCceE--EEEcCCCEEEEEEccc---CCCceeEEEcch-hheeEEEeccccceEEEEE
Confidence 333344 555 3336667799999973 224556666553 7889999999999999863
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=82.46 E-value=2.2 Score=20.79 Aligned_cols=29 Identities=10% Similarity=0.051 Sum_probs=19.7
Q ss_pred cCCCEEEEEe-CCCcEEEEEcCCCcchhhh
Q psy13207 163 ITGTIVASSG-DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 163 p~~~~l~~~~-~dg~i~iw~~~~~~~~~~~ 191 (197)
|++++|+++. .+++|.++|..+.+....+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i 30 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATI 30 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 5677665544 5789999998776554443
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=82.10 E-value=20 Score=27.21 Aligned_cols=26 Identities=19% Similarity=0.420 Sum_probs=21.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~ 55 (197)
..++|+|.|+ |+.|++ ...|.|++++
T Consensus 3 ~P~~~a~~pd--G~l~v~-e~~G~i~~~~ 28 (331)
T PF07995_consen 3 NPRSMAFLPD--GRLLVA-ERSGRIWVVD 28 (331)
T ss_dssp SEEEEEEETT--SCEEEE-ETTTEEEEEE
T ss_pred CceEEEEeCC--CcEEEE-eCCceEEEEe
Confidence 3578999998 877765 5599999999
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=81.04 E-value=26 Score=27.96 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=26.4
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV 59 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~ 59 (197)
..-..-+.|.|.|+ |+.|++--..|.|++++..+.
T Consensus 27 ~GL~~Pw~maflPD--G~llVtER~~G~I~~v~~~~~ 61 (454)
T TIGR03606 27 SGLNKPWALLWGPD--NQLWVTERATGKILRVNPETG 61 (454)
T ss_pred CCCCCceEEEEcCC--CeEEEEEecCCEEEEEeCCCC
Confidence 34456789999998 987777655699999876543
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=80.70 E-value=3.2 Score=29.44 Aligned_cols=15 Identities=20% Similarity=-0.008 Sum_probs=10.2
Q ss_pred EEeeCCCeEEEEEcc
Q psy13207 122 ATCSSDQNIKVTRDV 136 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~ 136 (197)
+.|+.+|.|.+|...
T Consensus 74 ~vG~~dg~v~~~n~n 88 (238)
T KOG2444|consen 74 MVGTSDGAVYVFNWN 88 (238)
T ss_pred EeecccceEEEecCC
Confidence 667777777777553
|
|
| >PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length | Back alignment and domain information |
|---|
Probab=80.51 E-value=4.1 Score=18.28 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=19.4
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEE
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTR 134 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d 134 (197)
+.|.+++..+..+ +.+.+-+.+|+|.
T Consensus 2 E~i~aia~g~~~v--avaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGDSWV--AVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccCCEE--EEEeCCCeEEecC
Confidence 3566777777777 8888888988873
|
The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=80.25 E-value=15 Score=26.73 Aligned_cols=62 Identities=11% Similarity=0.009 Sum_probs=41.8
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
++.+ +.|+.+| +.+++.... ....... +...|..+...|+-+.|++-+ |+.+.++++.....
T Consensus 7 ~~~L--~vGt~~G-l~~~~~~~~----~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~ 68 (275)
T PF00780_consen 7 GDRL--LVGTEDG-LYVYDLSDP----SKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEP 68 (275)
T ss_pred CCEE--EEEECCC-EEEEEecCC----ccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcc
Confidence 4556 8888888 888888321 1222221 123499999999877777765 59999999876543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides | Back alignment and domain information |
|---|
Probab=80.16 E-value=10 Score=22.52 Aligned_cols=30 Identities=7% Similarity=0.016 Sum_probs=23.7
Q ss_pred cEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy13207 155 TVWRVSWNITGTIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~ 184 (197)
.-+.+.++|++++|..++ ..+.|++|+.+.
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 347899999998887766 678999998753
|
The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=80.02 E-value=33 Score=28.39 Aligned_cols=68 Identities=13% Similarity=0.048 Sum_probs=38.7
Q ss_pred CCCeEEEEeeCCC-----eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCc-----EEEEEcCCC
Q psy13207 116 YYGLRMATCSSDQ-----NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC-----VRLWKLKKK 185 (197)
Q Consensus 116 ~~~~~~~s~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~-----i~iw~~~~~ 185 (197)
+... +.|+.|+ .|..||.++. +...+..+......+....+ +++..+.|+.||. |..||..+
T Consensus 476 ~~iY--vvGG~~~~~~~~~VE~ydp~~~---~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~- 547 (571)
T KOG4441|consen 476 GKIY--VVGGFDGTSALSSVERYDPETN---QWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPET- 547 (571)
T ss_pred CEEE--EECCccCCCccceEEEEcCCCC---ceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCC-
Confidence 4445 7777665 3667887663 24444444443344333333 5777788887765 66677655
Q ss_pred cchhhh
Q psy13207 186 RKKKKE 191 (197)
Q Consensus 186 ~~~~~~ 191 (197)
.+|...
T Consensus 548 d~W~~~ 553 (571)
T KOG4441|consen 548 DTWTEV 553 (571)
T ss_pred CceeeC
Confidence 345443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 197 | ||||
| 3f3f_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 8e-16 | ||
| 3f3f_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 9e-09 | ||
| 3ewe_A | 349 | Crystal Structure Of The Nup85SEH1 COMPLEX Length = | 8e-16 | ||
| 3ewe_A | 349 | Crystal Structure Of The Nup85SEH1 COMPLEX Length = | 1e-08 | ||
| 3f3p_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 1e-15 | ||
| 3f3p_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 1e-08 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 2e-10 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 2e-10 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 3e-10 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 4e-10 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 3e-09 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 3e-09 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 1e-04 |
| >pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351 | Back alignment and structure |
|
| >pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351 | Back alignment and structure |
|
| >pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349 | Back alignment and structure |
|
| >pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349 | Back alignment and structure |
|
| >pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351 | Back alignment and structure |
|
| >pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.97 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.97 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.97 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.97 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.97 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.97 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.97 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.96 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.96 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.96 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.96 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.96 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.96 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.96 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.96 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.96 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.96 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.96 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.96 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.96 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.96 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.96 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.96 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.96 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.96 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.96 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.96 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.96 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.95 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.95 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.95 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.95 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.95 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.95 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.95 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.95 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.95 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.95 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.95 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.94 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.94 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.94 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.94 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.94 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.94 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.94 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.94 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.93 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.93 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.93 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.93 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.93 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.93 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.93 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.93 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.93 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.93 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.93 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.93 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.93 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.93 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.93 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.93 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.93 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.93 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.93 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.93 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.92 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.92 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.92 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.92 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.92 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.92 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.92 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.92 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.92 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.92 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.92 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.92 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.92 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.92 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.92 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.92 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.92 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.92 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.91 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.91 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.91 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.91 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.91 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.91 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.91 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.91 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.91 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.91 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.9 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.9 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.9 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.9 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.9 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.9 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.9 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.9 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.9 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.89 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.89 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.89 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.89 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.89 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.88 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.88 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.88 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.88 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.88 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.88 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.87 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.86 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.86 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.83 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.81 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.78 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.78 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.77 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.76 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.76 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.74 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.73 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.71 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.64 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.62 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.6 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.6 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.57 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.53 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.53 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.52 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.52 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.51 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.5 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.5 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.49 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.49 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.49 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.48 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.48 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.47 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.46 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.45 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.43 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.43 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.4 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.39 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.37 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.36 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.35 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.34 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.34 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.33 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.29 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.26 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.23 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.23 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.22 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.18 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.17 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.15 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.15 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.14 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.14 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.14 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.07 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.0 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.99 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.98 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.91 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.9 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.89 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.87 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.87 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.87 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.84 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.83 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.81 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.81 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.78 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.77 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.76 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.7 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.69 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.66 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.66 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.66 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.63 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.57 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.57 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.49 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.44 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.43 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.4 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.36 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.35 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.35 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.35 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.33 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.31 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.31 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.25 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.23 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.2 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.2 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.2 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.14 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.13 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.13 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.12 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.05 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.04 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.94 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.84 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.84 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.82 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.82 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.75 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.69 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.63 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.42 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.3 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.28 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.24 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.2 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.96 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.88 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 96.78 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.64 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 96.59 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 96.52 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.48 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.46 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 96.42 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.38 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 96.38 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 96.34 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.14 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.03 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 95.96 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.86 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 95.71 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 95.66 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 95.59 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 95.58 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.58 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.55 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 95.42 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 95.35 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 95.32 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 95.32 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 94.97 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 94.33 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 93.27 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 93.11 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 93.01 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 93.01 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 92.81 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 92.81 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 92.64 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 92.13 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 91.9 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 91.75 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 91.37 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 91.29 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 91.21 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 91.17 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 90.89 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 90.66 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 89.95 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 89.76 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 89.15 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 88.27 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 88.06 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 87.79 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 87.57 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 87.5 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 87.45 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 86.88 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 86.83 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 86.82 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 86.78 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 85.78 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 84.66 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 83.64 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 83.48 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 83.23 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 83.11 | |
| 4fhn_B | 1139 | Nucleoporin NUP120; protein complex,structural pro | 82.75 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 82.72 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 82.49 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 82.47 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 82.24 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 82.05 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 80.01 |
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=186.79 Aligned_cols=173 Identities=16% Similarity=0.238 Sum_probs=147.6
Q ss_pred cccccccceeeee----------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC
Q psy13207 6 LQSEKCLNQWTRR----------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +.+|++|+.|++|++||+.+++.+..+. .+..
T Consensus 36 ~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~s~D~~v~~wd~~~~~~~~~~~-----~h~~ 108 (319)
T 3frx_A 36 ASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSASWDKTLRLWDVATGETYQRFV-----GHKS 108 (319)
T ss_dssp EETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSS
T ss_pred ecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEEeCCCEEEEEECCCCCeeEEEc-----cCCC
Confidence 4678999999864 357899999999999999 9999999999999999999876543322 2367
Q ss_pred CeeeEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCC------CeEEEEeeCCCeEEEEEccCCc
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYY------GLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~------~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
.|.+++|+|++..++++ +++|+ +..+. +|...|.+++|++. ...+++++.|+.|++||+++
T Consensus 109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-- 185 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-- 185 (319)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT--
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc--
Confidence 89999999999998776 89999 56677 89999999999842 23459999999999999976
Q ss_pred ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
......+.+|...|.+++|+|+|++|++++.||+|++||+++.+....+
T Consensus 186 ---~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 186 ---FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp ---TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ---chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 5677788899999999999999999999999999999999987655444
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=184.97 Aligned_cols=175 Identities=15% Similarity=0.216 Sum_probs=143.2
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++++..+ ...+. +...|.+
T Consensus 73 ~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~~~-----~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWAL-----EQTFEGHEHFVMC 145 (304)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTTEE-----EEEECCCCSCEEE
T ss_pred ECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCcch-----hhhhcccCCcEEE
Confidence 4568899999864 468899999999999999 999999999999999999875332 12222 3678999
Q ss_pred EEEcc-CCCcccce-----eEEEEe------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 80 LTWNH-SFSRFNSI-----SIMYEA------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 80 ~~~~~-~~~~~~~~-----~~~~~~------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
++|+| ++..++++ +++||+ ..+...|...+..++|+ ++.-+|++++.|+.|++||+++ ..+
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-----~~~ 220 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-----KSC 220 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-----TEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-----Ccc
Confidence 99999 45667665 899992 23332567889999997 3443449999999999999987 678
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+..+.+|...|.+++|+|++++|++|+.||+|++||+++.+....+.
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc
Confidence 88899999999999999999999999999999999999877655544
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=186.54 Aligned_cols=176 Identities=16% Similarity=0.193 Sum_probs=149.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|++. ..+..|...+.+++|+|+ +++|++++.||.|++|++.+++....+. .....+.++
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~~~~~~~-----~~~~~v~~~ 170 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGKKEYSLD-----TRGKFILSI 170 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEETTTCSEEEEEE-----CSSSCEEEE
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCceeEEec-----CCCceEEEE
Confidence 4678999999864 357788899999999999 9999999999999999998876432221 125679999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+|+|++++++++ +++|| +..+. +|...|.+++|+|+.-+|++++.|+.|++||+++ ......+
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-----~~~~~~~ 244 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-----ANLAGTL 244 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-----CCEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-----cceeEEE
Confidence 999999998876 89999 56677 8999999999995554459999999999999976 5677888
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
.+|...|.+++|+|++++|++++.|++|++||+++++....+..+
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h 289 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 289 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC
Confidence 999999999999999999999999999999999988776655443
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=184.66 Aligned_cols=174 Identities=14% Similarity=0.228 Sum_probs=147.3
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|+++++|+.. ..+.+|...|.+++|+|+ +..+++++.|++|++||+.+++.+..+. .+...+.
T Consensus 54 gs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~--~~~l~s~s~D~~i~lWd~~~~~~~~~~~-----~~~~~~~ 126 (321)
T 3ow8_A 54 GSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT--LPIAASSSLDAHIRLWDLENGKQIKSID-----AGPVDAW 126 (321)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCTTCCC
T ss_pred EcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCCEEEEEe-----CCCccEE
Confidence 5678999999864 257899999999999998 9999999999999999999876543332 1256788
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
+++|+|++++++++ +++|+ ...+. .|...+.+++|+++.-+|++|+.|+.|++||+++ .+.+.
T Consensus 127 ~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-----~~~~~ 200 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-----GKLLH 200 (321)
T ss_dssp CEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----TEEEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-----CcEEE
Confidence 99999999998775 79999 44556 7888999999995544459999999999999987 67788
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+.+|..+|.+++|+|++++|++++.|++|++||+++......+.
T Consensus 201 ~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence 899999999999999999999999999999999998876555443
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=183.27 Aligned_cols=160 Identities=16% Similarity=0.150 Sum_probs=135.9
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
++..+|.+|.+.|.+++|+|+ +.+|++++.||+|++||+.++..+..+. .+..++.+++|+|++++++++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~--~~~l~s~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPT--EPWVLTTLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred eeEEeecCCCCceEEEEECCC--CCEEEEEcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCC
Confidence 456678999999999999999 9999999999999999998876543322 125689999999999998776
Q ss_pred --eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI- 163 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p- 163 (197)
+++|+ +..+. +|...|.+++|+|+.-+|++|+.|+.|++||+++. ......+.+|...|.+++|+|
T Consensus 77 ~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~----~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----WALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT----TEEEEEECCCCSCEEEEEECTT
T ss_pred CEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC----cchhhhhcccCCcEEEEEECCC
Confidence 89999 56677 89999999999955544599999999999999752 245567889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
++.+|++|+.|++|++||+++...
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCc
Confidence 679999999999999999976554
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-29 Score=185.58 Aligned_cols=171 Identities=12% Similarity=0.132 Sum_probs=135.9
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
+..|+++++|++.. .+.+|.+.|++++|+|+ |++|++|+.|++|++||+.+++.+..+. .+...
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~~~~~~~-----~h~~~ 171 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQVVLSSYR-----AHAAQ 171 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSC
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEEc-----CcCCc
Confidence 45689999998752 24589999999999999 9999999999999999999876543322 13678
Q ss_pred eeeEEEccCCCc-ccce-----eEEEE------eeEec-ccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 77 ASCLTWNHSFSR-FNSI-----SIMYE------AHSIN-AEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 77 ~~~~~~~~~~~~-~~~~-----~~~~~------~~~~~-~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
|.+++|+|++.. ++++ +++|| +..+. ..|...+.+++|++ +..+|++|+.|+.|++||+++
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~----- 246 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS----- 246 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-----
Confidence 999999999875 4443 89999 33332 14566789999983 333338999999999999987
Q ss_pred eeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcch
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+++..+.+|...|++++|+|++ ++|++|+.|++|++||+++++..
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 67788899999999999999997 68999999999999999876543
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-28 Score=180.65 Aligned_cols=170 Identities=20% Similarity=0.316 Sum_probs=138.8
Q ss_pred cccccccceeeeee--------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCC
Q psy13207 6 LQSEKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~ 76 (197)
+..|+++++|+... ...+|...|.+++|+|+ +++|++|+.|+++++|++..... .....+. +...
T Consensus 34 ~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s~D~~v~iw~~~~~~~----~~~~~~~~h~~~ 107 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--GNYLASASFDATTCIWKKNQDDF----ECVTTLEGHENE 107 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT--SSEEEEEETTSCEEEEEECCC-E----EEEEEECCCSSC
T ss_pred EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC--CCEEEEEECCCcEEEEEccCCCe----EEEEEccCCCCC
Confidence 46789999998753 13689999999999999 99999999999999999876532 1122333 3678
Q ss_pred eeeEEEccCCCcccce-----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 77 ASCLTWNHSFSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
|.+++|+|++++|+++ +++|+ +..+. +|...|.+++|+|+.-+|++++.|+.|++||.++. .
T Consensus 108 v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~---~ 183 (345)
T 3fm0_A 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVVWHPSQELLASASYDDTVKLYREEED---D 183 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT---E
T ss_pred ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC---C
Confidence 9999999999998876 79999 23455 89999999999944333499999999999998752 1
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..+...+.+|...|++++|+|+|++|++++.|++|++|+....
T Consensus 184 ~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECT
T ss_pred EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccC
Confidence 3456778899999999999999999999999999999997543
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=186.08 Aligned_cols=176 Identities=16% Similarity=0.244 Sum_probs=149.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|++. .++.+|...|.+++|+|+ +.+|++|+.|++|++||+.++..+..+. .+...+.++
T Consensus 168 gs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~~~~~~~-----~h~~~v~~~ 240 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFT-----GHREWVRMV 240 (410)
T ss_dssp EETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEE
T ss_pred EeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEEe-----CCCccEEEE
Confidence 4678999999754 457899999999999998 9999999999999999999876543332 125679999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCC--------------------CeEEEEeeCCCe
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYY--------------------GLRMATCSSDQN 129 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~--------------------~~~~~s~~~d~~ 129 (197)
.|+|++..++++ +++|+ ...+. .|...|.+++|+++ .-+|++|+.|+.
T Consensus 241 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 999999998776 89999 55666 89999999999853 223499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
|++||+++ ..++..+.+|...|.+++|+|+|++|++++.||+|++||+++++....+..+
T Consensus 320 i~iwd~~~-----~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 320 IKMWDVST-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp EEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECC
T ss_pred EEEEECCC-----CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 99999987 6778888999999999999999999999999999999999888776665544
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=182.83 Aligned_cols=173 Identities=18% Similarity=0.239 Sum_probs=134.6
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|++. ..+.+|...|++++|+|++ ..++++++.||+|++||+++++....... ......+.++
T Consensus 157 gs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~~~v~~v 232 (357)
T 4g56_B 157 GGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPATRIDF---CASDTIPTSV 232 (357)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCBCBCCC---TTCCSCEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCceeeeeee---ccccccccch
Confidence 4678899999764 4688999999999999972 35789999999999999988765433221 1125678999
Q ss_pred EEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 81 TWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 81 ~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
+|+|++.. ++++ +++|| +..+. +|...|++++|++ .++ ++|+.|+.|++||+++ .+.
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~l--asgs~D~~i~iwd~~~-----~~~ 304 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA-VHSQNITGLAYSYHSSPFL--ASISEDCTVAVLDADF-----SEV 304 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC-CCSSCEEEEEECSSSSCCE--EEEETTSCEEEECTTS-----CEE
T ss_pred hhhhcccceEEEeecccceeEEECCCCcEeEEEe-ccceeEEEEEEcCCCCCEE--EEEeCCCEEEEEECCC-----CcE
Confidence 99998654 5544 89999 66677 8999999999983 345 9999999999999976 444
Q ss_pred eeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+. ..+|...|++++|+| ++++|++++.||+|++|++...++...+
T Consensus 305 ~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 305 FR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENL 350 (357)
T ss_dssp EE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--------
T ss_pred eE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccc
Confidence 44 447999999999999 7999999999999999999876554443
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=185.99 Aligned_cols=175 Identities=19% Similarity=0.322 Sum_probs=148.1
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|+.. ..+.+|.+.|.+++|+|+ +++|++|+.|++|++||+.+.+.+..+. .+...|.++
T Consensus 126 ~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~--~~~l~sgs~D~~i~iwd~~~~~~~~~~~-----~h~~~V~~v 198 (410)
T 1vyh_C 126 ASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS--GKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198 (410)
T ss_dssp EESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT--SSEEEEEETTSCCCEEETTSSCEEECCC-----CCSSCEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeEEEc-----CCCCCEEEE
Confidence 4578999999854 468899999999999998 9999999999999999998765443322 126789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+|+|++.+++++ +++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||+++ ......+
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-----~~~~~~~ 272 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-----KECKAEL 272 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CCEEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-----CceeeEe
Confidence 999999998766 89999 56777 8999999999995444449999999999999976 5677788
Q ss_pred cCceecEEEEEEccC--------------------CCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 150 EDHYCTVWRVSWNIT--------------------GTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~--------------------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
.+|...|.+++|+|+ |.+|++|+.|++|++||++++.....+..
T Consensus 273 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 273 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 899999999999996 67999999999999999998776655443
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=179.60 Aligned_cols=166 Identities=16% Similarity=0.223 Sum_probs=137.4
Q ss_pred cccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc
Q psy13207 6 LQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 73 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +.+|++|+.|++|++||+++++.+..+. .+
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~--~~~l~s~s~D~~v~lwd~~~~~~~~~~~-----~h 117 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE--NCFAISSSWDKTLRLWDLRTGTTYKRFV-----GH 117 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS--TTEEEEEETTSEEEEEETTSSCEEEEEE-----CC
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC--CCEEEEEcCCCcEEEEECCCCcEEEEEc-----CC
Confidence 4678999999874 357899999999999998 9999999999999999999876543322 23
Q ss_pred CCCeeeEEEccCCCcccce-----eEEEEee-----Eec--ccCCCceeEEEEcCCC----------eEEEEeeCCCeEE
Q psy13207 74 PTLASCLTWNHSFSRFNSI-----SIMYEAH-----SIN--AEHKDLIHDVAYDYYG----------LRMATCSSDQNIK 131 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~--~~~~~~i~~~~~~~~~----------~~~~s~~~d~~i~ 131 (197)
...|.+++|+|++++++++ +++|++. ... ..|...|.+++|++.. -+|++++.|+.|+
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 6789999999999998766 8999931 111 1588899999999432 2349999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
+||.. ......+.+|...|.+++|+|+|++|++|+.||.|++||+..
T Consensus 198 iwd~~------~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 198 VWNTN------FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEETT------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred EEcCC------CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 99954 456667889999999999999999999999999999999954
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-28 Score=177.75 Aligned_cols=168 Identities=17% Similarity=0.145 Sum_probs=132.8
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce--
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+..+|++|.++|++++|+|+. +++|+||+.|++|+|||+.+.+...... ...+. +...|.+++|+|++++++++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~-~~~l~S~s~D~~i~vWd~~~~~~~~~~~-~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQF-PDMILSASRDKTIIMWKLTRDETNYGIP-QRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTC-TTEEEEEETTSCEEEEEECCSSSCSEEE-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCccCCEEEEEEeCCC-CCEEEEEcCCCeEEEEECCCCCccccee-eEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 4556799999999999999962 6899999999999999998765332221 22333 36789999999999988665
Q ss_pred ---eEEEE-------------------------------------------------eeEecccCCCceeEEEEc--CCC
Q psy13207 93 ---SIMYE-------------------------------------------------AHSINAEHKDLIHDVAYD--YYG 118 (197)
Q Consensus 93 ---~~~~~-------------------------------------------------~~~~~~~~~~~i~~~~~~--~~~ 118 (197)
+++|+ ..... +|...+..++|+ +..
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE-SHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS-SCSSCEEEEEECSCSSS
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEec-cccCcccceEEccCCCC
Confidence 33444 11122 677888999998 444
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.++++++.|+.|++||+++ .+.+..+.+|...|.+++|+|++++|++|+.||+|++||+++.+....+
T Consensus 186 ~~~~s~~~d~~i~i~d~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLAN-----CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CEEEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEcCCCEEEEEECCC-----CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 4458999999999999976 6778888999999999999999999999999999999999987655443
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-28 Score=179.31 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=134.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|.+.|.+++|+|+ + .+|++|+.|++|++||+++++....+... .....+.+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~--~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~---~~~~~~~~ 219 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPH--KDSVFLSCSEDNRILLWDTRCPKPASQIGCS---APGYLPTS 219 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSS--CTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCC--CCCceeeeccccccccccccccceeeeeecc---eeecccee
Confidence 4678999999854 468899999999999998 5 57899999999999999987654332211 12456889
Q ss_pred EEEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
++|+|++.. ++++ +++|| +..+. +|...|++++|+|+. -+|++|+.|+.|++||.++ .+ +
T Consensus 220 ~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-----~~-~ 292 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-----SE-L 292 (344)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC-----CE-E
T ss_pred eeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-----Cc-E
Confidence 999997654 5544 89999 66777 899999999999432 2239999999999999975 33 4
Q ss_pred eeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 147 GNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+.+|...|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 293 ~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 293 FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 45789999999999999875 67799999999999998643
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-28 Score=175.37 Aligned_cols=174 Identities=18% Similarity=0.224 Sum_probs=136.9
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..|+++++|++. .++.+|.++|.+++|+|...+++|+||+.|++|++||+.+++... ...+. +...|
T Consensus 27 ~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~----~~~~~~h~~~v 102 (297)
T 2pm7_B 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ----IAVHAVHSASV 102 (297)
T ss_dssp EETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC----CEEECCCSSCE
T ss_pred EeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE----EEEeecCCCce
Confidence 4678999999874 357899999999999863227899999999999999998764211 11222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEEe--------eEecccCCCceeEEEEcCCC-------------eEEEEeeCCCe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYEA--------HSINAEHKDLIHDVAYDYYG-------------LRMATCSSDQN 129 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~~--------~~~~~~~~~~i~~~~~~~~~-------------~~~~s~~~d~~ 129 (197)
.+++|+|+ +..++++ +++|++ ..+. +|...|.+++|+|+. -+|++|+.|+.
T Consensus 103 ~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~ 181 (297)
T 2pm7_B 103 NSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 181 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-CCSSCEEEEEECCCC------------CCEEEEEETTSC
T ss_pred eEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCc
Confidence 99999998 6777665 799993 2344 789999999999641 23499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCC---CEEEEEeCCCcEEEEEcCCC
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG---TIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~---~~l~~~~~dg~i~iw~~~~~ 185 (197)
|++||+++... .......+.+|...|.+++|+|++ ++|++++.|++|++||++..
T Consensus 182 v~lwd~~~~~~-~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 182 VKIWKYNSDAQ-TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEEEEETTTT-EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEEEcCCCc-eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 99999975321 123566788999999999999984 89999999999999999764
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-27 Score=175.86 Aligned_cols=174 Identities=18% Similarity=0.292 Sum_probs=135.7
Q ss_pred cccccccceeeeee-------ee-cC-CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceec-cC
Q psy13207 6 LQSEKCLNQWTRRS-------NL-VD-SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVA-CP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~-~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~-~~ 74 (197)
+..|+++++|++.. .+ .+ |..+|.+++|+|+ +++|++|+.|++|+||++...... ........+. +.
T Consensus 30 ~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~ 107 (330)
T 2hes_X 30 GSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH--TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE 107 (330)
T ss_dssp EESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT--SSEEEEEETTSCEEEEEC-------CCCEEEEEEC---
T ss_pred EcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC--CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC
Confidence 46789999997642 24 34 9999999999998 999999999999999998643211 1112223333 36
Q ss_pred CCeeeEEEccCCCcccce-----eEEEEe----------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc
Q psy13207 75 TLASCLTWNHSFSRFNSI-----SIMYEA----------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
..|.+++|+|++++|+++ +++|++ ..+. +|...|.+++|+|+.-+|++++.|+.|++||..+.
T Consensus 108 ~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~- 185 (330)
T 2hes_X 108 NEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD- 185 (330)
T ss_dssp -CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT-
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-
Confidence 789999999999998876 899994 3455 79999999999955444599999999999998651
Q ss_pred ccceeeeeeecCceecEEEEEEccC--CCEEEEEeCCCcEEEEEcCCC
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...++..+.+|...|++++|+|+ +.+|++++.|++|++||++..
T Consensus 186 --~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 186 --DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp --EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred --CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 13677889999999999999998 779999999999999998754
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=177.82 Aligned_cols=163 Identities=13% Similarity=0.165 Sum_probs=138.6
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
....++.+|.++|.+++|+|+ +++|++|+.||+|++||+.+++.+..+. .+...+.+++|+|++++++++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d--~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTD--SRLLLSASQDGKLIIWDSYTTNKVHAIP-----LRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEE-----CSSSCEEEEEECTTSSEEEEEETT
T ss_pred hhheeecCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCCcceEee-----cCCccEEEEEECCCCCEEEEEeCC
Confidence 445678999999999999999 9999999999999999998876543322 125679999999999998776
Q ss_pred --eEEEE----------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 --SIMYE----------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 --~~~~~----------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+++|+ ...+. +|...|.++.|+ ...+ ++++.|+.|++||+++ ...+..+.+|...|.++
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~l--~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQI--VTSSGDTTCALWDIET-----GQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTEE--EEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEE
T ss_pred CeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCcE--EEEECCCcEEEEECCC-----CcEEEEEcCCCCceEEE
Confidence 79998 23455 799999999999 5556 9999999999999977 67788889999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+|+|+++++++|+.|++|++||++++.....+..
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence 9999999999999999999999998776555443
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-27 Score=173.52 Aligned_cols=165 Identities=20% Similarity=0.291 Sum_probs=140.7
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
+.+.+..++.+|..+|.+++|+|+ +++|++++.||.|++|++.+++....+. .+...+.+++|+|++++++++
T Consensus 11 ~~~~~~~~~~gh~~~v~~~~~s~~--~~~l~s~~~dg~i~iw~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 11 PNYALKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGKFEKTIS-----GHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp CCCEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEE
T ss_pred CCceeEEEEcccCCcEEEEEECCC--CCEEEEeeCCCeEEEEeCCCcccchhhc-----cCCCceEEEEEcCCCCEEEEE
Confidence 456777889999999999999998 9999999999999999998765432221 236789999999999998766
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|+ +..+. +|...|.+++|+++.-+|++|+.|+.|++||+++ .+.+..+..|..+|.+++|
T Consensus 84 ~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-----GKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----CEEEEEecCCCCcEEEEEE
Confidence 89999 56677 8999999999995443449999999999999986 6677888899999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+|++++|++++.||.|++||+++++....
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 99999999999999999999988765443
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=181.24 Aligned_cols=166 Identities=13% Similarity=0.106 Sum_probs=130.1
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|++.. .+ .|...|.+++|+|+ |++|++++.| .+.+|+..++..+.... ...+...+.++
T Consensus 153 ~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspd--g~~l~s~s~~-~~~~~~~~~~~~~~~~~---~~~~~~~v~~v 225 (365)
T 4h5i_A 153 SKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTD--GKVVAYITGS-SLEVISTVTGSCIARKT---DFDKNWSLSKI 225 (365)
T ss_dssp SCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTT--SSEEEEECSS-CEEEEETTTCCEEEEEC---CCCTTEEEEEE
T ss_pred CCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccC--CceEEeccce-eEEEEEeccCcceeeee---cCCCCCCEEEE
Confidence 34678999998642 34 47788999999999 9999999855 56666666554332111 11125578999
Q ss_pred EEccCCCcccce---------eEEEE----------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccc
Q psy13207 81 TWNHSFSRFNSI---------SIMYE----------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 81 ~~~~~~~~~~~~---------~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
+|+|++..++++ ++.|+ ...+. +|...|++++|+|+.-+|++|+.|+.|+|||+++
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~---- 300 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASNDNSIALVKLKD---- 300 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT----
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC----
Confidence 999999988654 46666 23455 7899999999996555559999999999999987
Q ss_pred ceeeeee-ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 142 DIETIGN-FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 142 ~~~~~~~-~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+++.. +.+|...|++++|+|||++||+||.|++|+||+++.
T Consensus 301 -~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 -LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp -TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred -CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 667766 578999999999999999999999999999999964
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-27 Score=174.76 Aligned_cols=174 Identities=15% Similarity=0.187 Sum_probs=143.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|+.. ..+..|...|.+++|+|+ +++|++|+.|+.+++|++.+..... .....+. +...+.+
T Consensus 73 ~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~iw~~~~~~~~~--~~~~~~~~h~~~v~~ 148 (340)
T 1got_B 73 ASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS--GNYVACGGLDNICSIYNLKTREGNV--RVSRELAGHTGYLSC 148 (340)
T ss_dssp EETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT--SSEEEEEETTCEEEEEETTTCSBSC--EEEEEEECCSSCEEE
T ss_pred EeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC--CCEEEEEeCCCeEEEEECccCCCcc--eeEEEecCCCccEEE
Confidence 4678999999853 457789999999999999 9999999999999999998654211 1122222 3678999
Q ss_pred EEEccCCCcccce----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 80 LTWNHSFSRFNSI----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+.|++++..+.++ +++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||+++ ..+...+
T Consensus 149 ~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~-----~~~~~~~ 222 (340)
T 1got_B 149 CRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-----GMCRQTF 222 (340)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CSEEEEE
T ss_pred EEECCCCcEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeeEEEE
Confidence 9999988754333 89999 56677 8999999999995544459999999999999976 6677888
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
.+|...|.+++|+|++++|++++.||+|++||+++.+...
T Consensus 223 ~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 9999999999999999999999999999999998765443
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-27 Score=172.28 Aligned_cols=184 Identities=22% Similarity=0.307 Sum_probs=138.5
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~ 77 (197)
+..|+++++|++.. .+.+|...|.+++|+|+..+.+|++++.|++|++||+++...... ..+ .+...+
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~----~~~~~h~~~v 148 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP----IIIDAHAIGV 148 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC----EEEECCSSCE
T ss_pred EcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee----eeeecccCcc
Confidence 46789999998752 367899999999999963367999999999999999987532211 112 236789
Q ss_pred eeEEEccC-------------CCcccce-----eEEEEe----------eEecccCCCceeEEEEcCCC---eEEEEeeC
Q psy13207 78 SCLTWNHS-------------FSRFNSI-----SIMYEA----------HSINAEHKDLIHDVAYDYYG---LRMATCSS 126 (197)
Q Consensus 78 ~~~~~~~~-------------~~~~~~~-----~~~~~~----------~~~~~~~~~~i~~~~~~~~~---~~~~s~~~ 126 (197)
.+++|+|+ ++.|+++ +++||+ ..+. +|...|.+++|+|+. -+|++++.
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEEC
Confidence 99999997 3566655 899982 3456 899999999999652 44599999
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
|+.|++||+++........+.....|...|++++|+|+|++|++++.||+|++|+....+.|..+.+.
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC---
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEecccc
Confidence 99999999975211001111112567889999999999999999999999999999877777766544
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-27 Score=173.40 Aligned_cols=186 Identities=23% Similarity=0.387 Sum_probs=145.1
Q ss_pred cccccccceeeee---------eeecCCCcceeEEEECC--CCCCcEEEEEeCCCcEEEEEcCCccccc---ceecccee
Q psy13207 6 LQSEKCLNQWTRR---------SNLVDSRTSVTDVKFGP--KQLGLVLATCAADGLVRIYEAPDVMNLS---QWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------~~~~~h~~~v~~~~~~~--~~~~~~l~s~~~dg~v~iw~~~~~~~~~---~~~~~~~~ 71 (197)
+..|+.+++|++. ..+.+|..+|.+++|+| + +++|++++.||.|++||+.++.... .+.....+
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEY--GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGG--CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCC--CCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 3568899999765 24578999999999999 5 8899999999999999998764321 11222233
Q ss_pred c-cCCCeeeEEEccC--CCcccce-----eEEEEe---------------------------------------------
Q psy13207 72 A-CPTLASCLTWNHS--FSRFNSI-----SIMYEA--------------------------------------------- 98 (197)
Q Consensus 72 ~-~~~~~~~~~~~~~--~~~~~~~-----~~~~~~--------------------------------------------- 98 (197)
. +...+.+++|+|+ +.+++++ +++||+
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 2 3678999999999 8877665 788881
Q ss_pred ---------------------eEecccCCCceeEEEEcCCC----eEEEEeeCCCeEEEEEccCCc--------------
Q psy13207 99 ---------------------HSINAEHKDLIHDVAYDYYG----LRMATCSSDQNIKVTRDVMGT-------------- 139 (197)
Q Consensus 99 ---------------------~~~~~~~~~~i~~~~~~~~~----~~~~s~~~d~~i~~~d~~~~~-------------- 139 (197)
..+. +|...|.+++|+++. -+|++++.|+.|++||++...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 265 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNM 265 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------
T ss_pred EecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceec
Confidence 1123 588899999999554 344999999999999997521
Q ss_pred ---------------------------ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 140 ---------------------------RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 140 ---------------------------~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
......+..+.+|...|++++|+|++++|++++.||.|++|++.+++.+..+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 266 FDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp -------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred cCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 01235677788999999999999999999999999999999999988776665
Q ss_pred hh
Q psy13207 193 EE 194 (197)
Q Consensus 193 ~~ 194 (197)
..
T Consensus 346 ~~ 347 (351)
T 3f3f_A 346 VI 347 (351)
T ss_dssp EE
T ss_pred eh
Confidence 43
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-27 Score=173.31 Aligned_cols=174 Identities=19% Similarity=0.332 Sum_probs=131.3
Q ss_pred cccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-
Q psy13207 6 LQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA- 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~- 72 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +++|++|+.|++|++||+...... +.....+.
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~--~~~~~~~~~ 151 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEE--YECISVLQE 151 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCC--CEEEEEECC
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCC--eEEEEEecc
Confidence 4568999999762 347899999999999999 999999999999999999543211 11122233
Q ss_pred cCCCeeeEEEccCCCcccce-----eEEEE--------eeEecccCCCceeEEEEcCC--CeEEEEeeCCCeEEEEEccC
Q psy13207 73 CPTLASCLTWNHSFSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDYY--GLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~ 137 (197)
+...|.+++|+|++.+++++ +++|+ +..+. +|...|.+++|+++ ..+|++++.|+.|++||++.
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 36789999999999998776 79998 34566 89999999999955 44559999999999999864
Q ss_pred Ccc---cceeeeeeecC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 138 GTR---FDIETIGNFED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 138 ~~~---~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
... ........+.. |...|.+++|++++ +|++++.||+|++|+...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 210 01134444554 88999999999765 7999999999999998764
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-27 Score=174.32 Aligned_cols=164 Identities=19% Similarity=0.312 Sum_probs=133.8
Q ss_pred eeeeeecCCCc-ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 16 TRRSNLVDSRT-SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 16 ~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+..++.+|.. .|.+++|+|+ |++|++|+.|++|+|||+.+......... ...+...|.+++|+|++++|+++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~--g~~las~~~D~~i~iw~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPA--GTLLASCGGDRRIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTT--SSCEEEEETTSCEEEEEEETTEEEEEEEE--CSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCC--CCEEEEEcCCCeEEEEEcCCCcceeeeee--ccccCCcEEEEEECCCCCEEEEEEC
Confidence 45567889988 9999999999 99999999999999999877642211110 11236789999999999998876
Q ss_pred ---eEEEE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ---SIMYE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ---~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|+ +..+. +|...|.+++|+|+.-+|++|+.|+.|++||+++.. ....+..+.+|...|.+++|
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED--EYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS--CEEEEEEECCCCSCEEEEEE
T ss_pred CCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC--CeEEEEEecCcCCCeEEEEE
Confidence 79998 34566 899999999999544444999999999999997531 13456778899999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+|++++|++++.|++|++||.+..+
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDD 183 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCC
Confidence 9999999999999999999987653
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-27 Score=175.24 Aligned_cols=165 Identities=15% Similarity=0.167 Sum_probs=137.5
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
....++.+|.++|++++|+|+ +.+|+||+.||+|++||..+.+....+.. +...+.+++|+|++..++++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d--~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-----~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKD--KRRIVSSSQDGKVIVWDSFTTNKEHAVTM-----PCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEEC-----SSSCCCEEEECTTSSEEEEESTT
T ss_pred EEEEEecCCCCeEEEEEECCC--CCEEEEEeCCCeEEEEECCCCCcceEEec-----CCCCEEEEEECCCCCEEEEeeCC
Confidence 345678999999999999999 99999999999999999887754433221 25678999999999998876
Q ss_pred --eEEEE------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE
Q psy13207 93 --SIMYE------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158 (197)
Q Consensus 93 --~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~ 158 (197)
+++|+ ...+. .|...|.+++|+++.-.|++++.|+.|++||+++ .+.+..+.+|...|.+
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~-----~~~~~~~~~h~~~v~~ 201 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVES-----GQLLQSFHGHGADVLC 201 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----CCEEEEEECCSSCEEE
T ss_pred CCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-----CeEEEEEcCCCCCeEE
Confidence 78897 23455 7999999999995443449999999999999987 6778889999999999
Q ss_pred EEEcc--CCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 159 VSWNI--TGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 159 ~~~~p--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
++|+| ++++|++|+.||+|++||+++++....+..
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~ 238 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET 238 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 99988 578999999999999999998876655543
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=192.00 Aligned_cols=174 Identities=19% Similarity=0.268 Sum_probs=145.1
Q ss_pred cccccccceeeee----------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC
Q psy13207 6 LQSEKCLNQWTRR----------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +++|+||+.||+|++||+.++.....+. .+..
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-----~h~~ 473 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD--GQFALSGSWDGELRLWDLAAGVSTRRFV-----GHTK 473 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSS
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC--CCEEEEEeCCCcEEEEECCCCcceeEEe-----CCCC
Confidence 5678999999864 357899999999999999 9999999999999999998876543222 2367
Q ss_pred CeeeEEEccCCCcccce-----eEEEEe-----eEec---ccCCCceeEEEEcCCC--eEEEEeeCCCeEEEEEccCCcc
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYEA-----HSIN---AEHKDLIHDVAYDYYG--LRMATCSSDQNIKVTRDVMGTR 140 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~---~~~~~~i~~~~~~~~~--~~~~s~~~d~~i~~~d~~~~~~ 140 (197)
.|.+++|+|+++.++++ +++|+. ..+. .+|...|.+++|+++. ..+++++.|+.|++||+++
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~--- 550 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN--- 550 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---
Confidence 89999999999998876 799991 1221 2688899999999442 2349999999999999976
Q ss_pred cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 141 FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 141 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
......+.+|...|.+++|+|++++|++++.||+|++||+++++....+
T Consensus 551 --~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 551 --CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp --CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred --CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 6677888999999999999999999999999999999999887655443
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-27 Score=174.95 Aligned_cols=175 Identities=18% Similarity=0.210 Sum_probs=143.3
Q ss_pred cccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|+. ...+..|...|.+++|+|+ +..|++|+.|+.+++|++..............+. +...+.+
T Consensus 82 ~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~--g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~ 159 (354)
T 2pbi_B 82 SSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSA 159 (354)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT--SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEE
T ss_pred EeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC--CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEE
Confidence 467899999974 3456778899999999999 9999999999999999987543221111122222 3678999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+.|+|++..++++ +++|| +..+. +|...|.+++|++ +.-+|++|+.|+.|++||+++ ..++
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~-----~~~~ 233 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS-----GQCV 233 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT-----CCEE
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC-----CcEE
Confidence 9999999888765 89999 56777 8999999999973 222339999999999999987 6778
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
..+.+|...|.+++|+|++++|++++.|++|++||++.....
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 888999999999999999999999999999999999876543
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=188.33 Aligned_cols=171 Identities=16% Similarity=0.287 Sum_probs=140.7
Q ss_pred ccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEE
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTW 82 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (197)
+..+++|++. ..+.+|...|++++|+|+ |++||+|+.|++|+|||+.+++... ...+. +...|.+++|
T Consensus 38 ~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spd--g~~lasg~~d~~v~lWd~~~~~~~~----~~~~~~~~~~v~~v~f 111 (611)
T 1nr0_A 38 GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS--GYYCASGDVHGNVRIWDTTQTTHIL----KTTIPVFSGPVKDISW 111 (611)
T ss_dssp TTEEEEEETTCSSCCEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEESSSTTCCE----EEEEECSSSCEEEEEE
T ss_pred CCEEEEecCCCcccCeEecCCCCceEEEEECCC--CcEEEEEeCCCCEEEeECCCCccee----eEeecccCCceEEEEE
Confidence 4578888764 358899999999999999 9999999999999999987543221 11222 2678999999
Q ss_pred ccCCCcccce---------eEEEE----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 83 NHSFSRFNSI---------SIMYE----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 83 ~~~~~~~~~~---------~~~~~----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+|+++.++++ +++|+ +..+. +|...|++++|+|+. .+|++|+.|+.|++||.++ .++...
T Consensus 112 s~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-----~~~~~~ 185 (611)
T 1nr0_A 112 DSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----FKFKST 185 (611)
T ss_dssp CTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----BEEEEE
T ss_pred CCCCCEEEEEECCCCceeEEEEeeCCCCcceec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-----CeEeee
Confidence 9999988643 56676 45666 899999999999543 2349999999999999875 677788
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+.+|...|.+++|+|+|++|++++.|++|++||+.+++....+
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred eccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 9999999999999999999999999999999999877655444
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=185.86 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=137.1
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|++|++|++.. .+.+|.++|++++|+|.+ +++|+||+.||+|++||+++.... .+. ..-.....+.
T Consensus 138 Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~v~iwd~~~~~~~-~~~--~~~~~~~~~~ 213 (435)
T 4e54_B 138 GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGTTRLQDFKGNILR-VFA--SSDTINIWFC 213 (435)
T ss_dssp EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC-TTEEEEECSSSCEEEEETTSCEEE-EEE--CCSSCSCCCC
T ss_pred EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCEEEEeeccCCcee-EEe--ccCCCCccEE
Confidence 56889999998642 356899999999999842 789999999999999999764321 111 0001145678
Q ss_pred eEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
+++|+|++.+++++ +++|+ +..+. +|...|.+++|+++ ..+|++++.|+.|++||+++... ...+.
T Consensus 214 ~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~--~~~~~ 290 (435)
T 4e54_B 214 SLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG--KASFL 290 (435)
T ss_dssp CEEEETTTTEEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS--SSCCS
T ss_pred EEEECCCCCEEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecCcceeeEEecccccc--cceEE
Confidence 99999999998776 89999 55666 89999999999932 22338999999999999976321 12233
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
...+|...|.+++|+|+|++|++++.||+|++||+++....
T Consensus 291 ~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 291 YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 44678999999999999999999999999999999876543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=176.44 Aligned_cols=172 Identities=11% Similarity=0.138 Sum_probs=134.6
Q ss_pred ccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 7 QSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 7 ~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
..++++++|++.. ...+|.+.|.+++|+|+ +++|++|+.|++|++||+.+++.+..+. .+...+
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~~~~~~~-----~h~~~v 184 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKAVLKSYN-----AHSSEV 184 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCE
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEEc-----CCCCCE
Confidence 4578999998753 23479999999999999 9999999999999999999876543332 126789
Q ss_pred eeEEEccCCCc-ccce-----eEEEEe------eEec-ccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 78 SCLTWNHSFSR-FNSI-----SIMYEA------HSIN-AEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 78 ~~~~~~~~~~~-~~~~-----~~~~~~------~~~~-~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.+++|++++.. ++++ +++||+ ..+. ..|...+.+++|+|+ ..+|++|+.|+.|++||+++ .
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-----~ 259 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-----P 259 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-----G
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-----C
Confidence 99999999864 4433 899992 1111 146678999999832 22338999999999999976 6
Q ss_pred eeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.+..+.+|...|++++|+|++ ++|++++.|++|++||+++++....
T Consensus 260 ~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 260 DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 6778888999999999999987 6899999999999999988765443
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=174.61 Aligned_cols=180 Identities=14% Similarity=0.134 Sum_probs=142.1
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+++|++. ..+.+|...|.+++|+|+ +.+|++++.|++|++||+++++.... +.....+.++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~~~~~------~~~~~~v~~~ 212 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQCSLT------LSIEDGVTTV 212 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEE------EECSSCEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCeeEEE------EEcCCCcEEE
Confidence 4568899999854 468899999999999999 99999999999999999988754332 2235678999
Q ss_pred EEcc-CCCcccce-----eEEEE------eeEe-------cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc-
Q psy13207 81 TWNH-SFSRFNSI-----SIMYE------AHSI-------NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR- 140 (197)
Q Consensus 81 ~~~~-~~~~~~~~-----~~~~~------~~~~-------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~- 140 (197)
+|+| ++.+++++ +++|| +..+ . +|...|.+++|+++.-+|++++.|+.|++||+++...
T Consensus 213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT-GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------C-CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCC-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 9999 78888765 79999 2233 3 6889999999995444449999999999999975211
Q ss_pred ------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 141 ------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 141 ------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
....+...+.+|...|.+++|+|++++|++|+.|+.|++||+++++....+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 112345667889999999999999999999999999999999988766555433
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=169.43 Aligned_cols=168 Identities=16% Similarity=0.093 Sum_probs=135.6
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 92 (197)
...+..+|.+|.++|.+++|+|++ +++|+||+.|++|++|++........ .....+. +...|.+++|+|++++++++
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~-~~~l~s~s~D~~v~~W~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQ-PNLLLSASRDKTLISWKLTGDDQKFG-VPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEEEEEETTEEE-EEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEEEccccceEEEEEccCCC-ccEEEEecCCccEEEecCCCCCcccc-ccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 346677899999999999999962 58999999999999999865432111 1122333 36789999999999998776
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||++ ...+..+.+|...|.+++|
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~------~~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK------GQCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT------SCEEEEECCCSSCEEEEEE
T ss_pred eCCCEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC------CCeEEEEeccCCcEEEEEE
Confidence 89999 56677 899999999999544444999999999999986 4567788899999999999
Q ss_pred ccC------CCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 162 NIT------GTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 162 ~p~------~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+|. +.++++++.|+.|++||+++.+....
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 191 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee
Confidence 985 45899999999999999987654433
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-26 Score=167.66 Aligned_cols=173 Identities=15% Similarity=0.267 Sum_probs=142.4
Q ss_pred cccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+++|+. ...+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+. .+...+.++
T Consensus 41 ~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~~~~v~~~ 113 (312)
T 4ery_A 41 SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 113 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEE
T ss_pred eeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC--CCEEEEECCCCEEEEEECCCCcEEEEEc-----CCCCCEEEE
Confidence 456889999975 3467899999999999998 9999999999999999998876543322 126789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+|++.+++++ +++|| +..+. .|...|.+++|+++.-+|++++.|+.|++||+++ .+.+..+
T Consensus 114 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-----~~~~~~~ 187 (312)
T 4ery_A 114 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-----GQCLKTL 187 (312)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CCEEEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----CceeeEE
Confidence 999999998766 79999 55666 8999999999994443449999999999999976 4444443
Q ss_pred -cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 150 -EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 150 -~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+...+..++|+|++++|++++.||.|++||+++++....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 446678999999999999999999999999999887655444
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-27 Score=175.96 Aligned_cols=166 Identities=13% Similarity=0.189 Sum_probs=124.1
Q ss_pred eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc---------------------------
Q psy13207 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH--------------------------- 69 (197)
Q Consensus 17 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~--------------------------- 69 (197)
...+|.+|.++|++++|+|+ +.+|+||+.||+|++||+.+++....+....
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~--~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPE--KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEEECCCSSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred EeecccccccEEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 44678999999999999998 9999999999999999998765443222100
Q ss_pred ----------------eec-cCCCeeeEEEccCCC-cccce-----eEEEE------eeEe----cccCCCceeEEEEc-
Q psy13207 70 ----------------EVA-CPTLASCLTWNHSFS-RFNSI-----SIMYE------AHSI----NAEHKDLIHDVAYD- 115 (197)
Q Consensus 70 ----------------~~~-~~~~~~~~~~~~~~~-~~~~~-----~~~~~------~~~~----~~~~~~~i~~~~~~- 115 (197)
.+. +...+.++.|.|++. .++++ +++|| +..+ ..+|...|.+++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 000 123344555555433 23333 68887 2223 12688899999997
Q ss_pred --CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 116 --YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 116 --~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++.+ ++|+.|+.|++||++.. ...+..+.+|...|.+++|+|++++|++++.||+|++||++++.....
T Consensus 216 ~~~~~l--~sgs~D~~v~~wd~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 216 LNANMF--ISGSCDTTVRLWDLRIT----SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp SSCCEE--EEEETTSCEEEEETTTT----CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred CCCCEE--EEEECCCeEEEEECCCC----CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 3455 99999999999998742 456778889999999999999999999999999999999998765443
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-27 Score=171.89 Aligned_cols=183 Identities=22% Similarity=0.334 Sum_probs=136.5
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..|+++++|++. ..+.+|...|.+++|+|+..+.+|++|+.|++|++||++..... .....+. +...+
T Consensus 77 ~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~---~~~~~~~~h~~~v 153 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW---EVKKINNAHTIGC 153 (316)
T ss_dssp EETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE---EECCBTTSSSSCB
T ss_pred EECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc---ceeeeeccccCCc
Confidence 4578999999864 24678999999999999644679999999999999999865321 1111111 25678
Q ss_pred eeEEEccCC-----------------Ccccce-----eEEEEe---------eEecccCCCceeEEEEcCCC----eEEE
Q psy13207 78 SCLTWNHSF-----------------SRFNSI-----SIMYEA---------HSINAEHKDLIHDVAYDYYG----LRMA 122 (197)
Q Consensus 78 ~~~~~~~~~-----------------~~~~~~-----~~~~~~---------~~~~~~~~~~i~~~~~~~~~----~~~~ 122 (197)
.+++|+|+. .+++++ +++|++ ..+. +|...|++++|+|+. -+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCceEE
Confidence 899999973 456554 799983 2345 799999999999543 3349
Q ss_pred EeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 123 s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+++.|+.|++|++++.... ......+..|...|++++|+|++++|++++.|++|++|+....+.|..+..
T Consensus 233 s~s~D~~v~iw~~~~~~~~-~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSN-TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISD 302 (316)
T ss_dssp EEETTCEEEEEECSSTTCC-CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEE
T ss_pred EEcCCCeEEEEEccCcccc-chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeee
Confidence 9999999999998652100 111223456788999999999999999999999999999986666655443
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=175.98 Aligned_cols=175 Identities=14% Similarity=0.168 Sum_probs=134.8
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~ 77 (197)
+..++.+++|++.. .+.+|..+|.+++|+|+ +++|++++.|++|++||+.+++... ....+ .+...+
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~v~vwd~~~~~~~~---~~~~~~~~~~~v 103 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK--SNRIVTCSQDRNAYVYEKRPDGTWK---QTLVLLRLNRAA 103 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT--TCCEEEEETTSSEEEC------CCC---CEEECCCCSSCE
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC--CCEEEEEeCCCeEEEEEcCCCCcee---eeeEecccCCce
Confidence 34688999998763 36789999999999999 9999999999999999998765111 11111 236789
Q ss_pred eeEEEccCCCcccce-----eEEEE---------eeEeccc-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc--
Q psy13207 78 SCLTWNHSFSRFNSI-----SIMYE---------AHSINAE-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR-- 140 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~-- 140 (197)
.+++|+|+++.++++ +++|+ ...+. . |...|.+++|+++.-+|++++.|+.|++||++....
T Consensus 104 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 104 TFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp EEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-
T ss_pred EEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCC
Confidence 999999999998776 78998 23455 4 999999999995544449999999999999853110
Q ss_pred -----------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 141 -----------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 141 -----------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
....++..+ +|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 014456666 8999999999999999999999999999999998776
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=171.85 Aligned_cols=172 Identities=20% Similarity=0.234 Sum_probs=135.0
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..|+++++|++. ..+.+|.++|.+++|+|...+++|+||+.|++|++||+++++... ...+. +...|
T Consensus 31 gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~----~~~~~~h~~~V 106 (316)
T 3bg1_A 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK----SHEHAGHDSSV 106 (316)
T ss_dssp EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE----EEEECCCSSCC
T ss_pred EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE----EEEccCCCCce
Confidence 4678999999864 357899999999999862127899999999999999998753211 11222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEEee---------EecccCCCceeEEEEcCCC-----------------eEEEEe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYEAH---------SINAEHKDLIHDVAYDYYG-----------------LRMATC 124 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~~~---------~~~~~~~~~i~~~~~~~~~-----------------~~~~s~ 124 (197)
.+++|+|+ +.+++++ +++|++. .+. +|...+.+++|+++. -+|++|
T Consensus 107 ~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 185 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN-AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG 185 (316)
T ss_dssp CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT-SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECC
T ss_pred EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec-cccCCcceEEEccccCCccccccccccCccccceEEEe
Confidence 99999998 6677665 7999832 223 788899999998541 234999
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC----CEEEEEeCCCcEEEEEcCC
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG----TIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~----~~l~~~~~dg~i~iw~~~~ 184 (197)
+.|+.|++||.+... ...++..+.+|...|.+++|+|++ ++|++++.|++|++|+++.
T Consensus 186 s~D~~v~lWd~~~~~--~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 186 GCDNLIKLWKEEEDG--QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BTTSBCCEEEECTTS--CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCeEEEEEeCCCC--ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 999999999996421 124667788999999999999986 8999999999999999876
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-26 Score=180.32 Aligned_cols=160 Identities=21% Similarity=0.402 Sum_probs=135.4
Q ss_pred ccccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 7 QSEKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 7 ~~~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.|++|++||.... .+..+ ..+...+.+++|
T Consensus 404 ~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~~w~~~~~-~~~~~-----~~~~~~v~~~~~ 475 (577)
T 2ymu_A 404 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVKLWNRNGQ-LLQTL-----TGHSSSVRGVAF 475 (577)
T ss_dssp ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTSC-EEEEE-----ECCSSCEEEEEE
T ss_pred eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEEEEECCCC-EEEEE-----cCCCCCEEEEEE
Confidence 467889999743 457899999999999999 999999999999999996532 22111 123678999999
Q ss_pred ccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc
Q psy13207 83 NHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 83 ~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
+|++++++++ +++|+ +..+. +|...|++++|+|+.-+|++++.|+.|++||.. .+++..+.+|
T Consensus 476 spd~~~las~~~d~~i~iw~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~------~~~~~~~~~h 548 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTGH 548 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------SCEEEEEECC
T ss_pred cCCCCEEEEEeCCCEEEEEcCCCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC------CCEEEEEcCC
Confidence 9999999875 89999 67777 899999999999444334999999999999964 5678889999
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
...|++++|+|||++|++++.|++|++||
T Consensus 549 ~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 549 SSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999999997
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=168.38 Aligned_cols=167 Identities=11% Similarity=0.049 Sum_probs=125.4
Q ss_pred cccccceeeee------eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 8 SEKCLNQWTRR------SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 8 ~~~~~~~w~~~------~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
.++.++.|.+. ..+.+|...+..++|+| ++++.+|++++.|++|+|||+.+++.+..+.-... ....+.++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~--~v~~v~~v 232 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS--YQASVCHK 232 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CCCEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc--ceeeeEEE
Confidence 57888899872 34568999999999998 22279999999999999999999987665532111 12367788
Q ss_pred EEccCCCccc------------ce-----eEEEE------eeEe----cccCCCceeEEEEcCCCeEEEEeeCCCeEEEE
Q psy13207 81 TWNHSFSRFN------------SI-----SIMYE------AHSI----NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVT 133 (197)
Q Consensus 81 ~~~~~~~~~~------------~~-----~~~~~------~~~~----~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~ 133 (197)
+|+|++.+++ ++ +++|+ +..+ +.+|...+.+..+++..+ ++++.|++|++|
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~l--ASgS~DgTIkIW 310 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCA--AAILTSGTIAIW 310 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEE--EEEETTSCEEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEE--EEEcCCCcEEEE
Confidence 9999998763 22 68888 2222 225655555555555666 999999999999
Q ss_pred EccCCcccceeeeeeecCceecEE-EEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVW-RVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
|+.+ ++++..+.+|...+. .++|+|||++|++|+.|++|+|||+.
T Consensus 311 Dl~t-----Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 311 DLLL-----GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp ETTT-----CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred ECCC-----CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 9987 788889999987655 58999999999999999999999963
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-26 Score=171.71 Aligned_cols=170 Identities=12% Similarity=0.193 Sum_probs=132.8
Q ss_pred cccccccceeeeee-----ee-----cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cC
Q psy13207 6 LQSEKCLNQWTRRS-----NL-----VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~-----~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~ 74 (197)
+..|+++++|++.. .+ .+|...|.++.|+|.+ +++|++|+.|++|++||++..... ...+. +.
T Consensus 176 ~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sgs~D~~v~~wd~~~~~~~-----~~~~~~h~ 249 (380)
T 3iz6_a 176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN-ANMFISGSCDTTVRLWDLRITSRA-----VRTYHGHE 249 (380)
T ss_dssp ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS-CCEEEEEETTSCEEEEETTTTCCC-----CEEECCCS
T ss_pred ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC-CCEEEEEECCCeEEEEECCCCCcc-----eEEECCcC
Confidence 35789999998642 23 6799999999998731 889999999999999999743221 12222 36
Q ss_pred CCeeeEEEccCCCcccce-----eEEEE------eeEecccC-------CCceeEEEEcCCCeEEEEeeCCCeEEEEEcc
Q psy13207 75 TLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEH-------KDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~-------~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 136 (197)
..|.+++|+|++.+++++ +++|| +..+. .+ ...+.+++|+++.-+|++|+.||.|++||..
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN-REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC-CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec-ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 789999999999998876 89999 33333 22 2348999999444444999999999999987
Q ss_pred CCcccceeeeeee----cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 137 MGTRFDIETIGNF----EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 137 ~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
. .+.+..+ .+|...|.+++|+|+|++|++|+.|++|++|++...++
T Consensus 329 ~-----~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 329 L-----AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp T-----CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred C-----CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 5 4444444 67999999999999999999999999999999986543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-26 Score=166.28 Aligned_cols=170 Identities=14% Similarity=0.237 Sum_probs=125.7
Q ss_pred cccccceeeee-----ee--ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc------------
Q psy13207 8 SEKCLNQWTRR-----SN--LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ------------ 68 (197)
Q Consensus 8 ~~~~~~~w~~~-----~~--~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~------------ 68 (197)
.|+++++|+.. .. +.+|...|.+++|+|+ +++|++|+.||+|++|++.+++.+..+...
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~--~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~ 120 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 120 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETT
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC--CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCC
Confidence 47899999854 22 4578889999999999 999999999999999999887644332110
Q ss_pred -----------------------ceec-cCCCeeeEEEccCCCcccce-----eEEEEe---------------------
Q psy13207 69 -----------------------HEVA-CPTLASCLTWNHSFSRFNSI-----SIMYEA--------------------- 98 (197)
Q Consensus 69 -----------------------~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~--------------------- 98 (197)
..+. +...+..+.+.+++.+++++ +++||+
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 200 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 200 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEE
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceE
Confidence 0011 14556777888888777654 677760
Q ss_pred ---------------------------------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 99 ---------------------------------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 99 ---------------------------------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.... .+...+..+.|+ +..+.+++++.|+.|++||+++ .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-----~ 274 (318)
T 4ggc_A 201 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-----M 274 (318)
T ss_dssp EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----C
T ss_pred EEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-----C
Confidence 0011 233445566666 3444334455789999999976 6
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+++..+.+|...|++++|+|+|++|++|+.||+|++||+...
T Consensus 275 ~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 275 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 788899999999999999999999999999999999999764
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-26 Score=179.54 Aligned_cols=170 Identities=19% Similarity=0.330 Sum_probs=136.7
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceeccceeccC
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQHEVACP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~ 74 (197)
+..|+++++|++. ..+.+|.++|.+++|+|+ ++.|++++.+ ++|++||... ....+. .+.
T Consensus 77 g~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d--g~~l~~~~~~~~~~~~v~~wd~~~--~~~~l~-----gh~ 147 (611)
T 1nr0_A 77 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE--SKRIAAVGEGRERFGHVFLFDTGT--SNGNLT-----GQA 147 (611)
T ss_dssp EETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT--SCEEEEEECCSSCSEEEEETTTCC--BCBCCC-----CCS
T ss_pred EeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCC--CCEEEEEECCCCceeEEEEeeCCC--Ccceec-----CCC
Confidence 4578999999863 357789999999999999 9999988865 4788888432 222111 136
Q ss_pred CCeeeEEEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 75 TLASCLTWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
..|.+++|+|++.. ++++ +++|+ +..+. +|...|.+++|+|+.-+|++++.|+.|++||..+
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~----- 221 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD----- 221 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-cccCceEEEEECCCCCEEEEEECCCcEEEEECCC-----
Confidence 78999999999875 6654 89999 45677 8999999999995554559999999999999876
Q ss_pred eeeeeeec-------CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 143 IETIGNFE-------DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 143 ~~~~~~~~-------~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++.+..+. +|...|.+++|+|+|++|++++.|++|++||+++++....
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT 276 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeee
Confidence 45555552 7999999999999999999999999999999988765443
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-25 Score=163.43 Aligned_cols=175 Identities=18% Similarity=0.227 Sum_probs=140.8
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..++.+++|++. ..+.+|..+|.+++|+|+.++++|++|+.||.|++||+.+++.. ....+. +...+
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~v 104 (379)
T 3jrp_A 29 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS----QIAVHAVHSASV 104 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE----EEEEECCCSSCE
T ss_pred EECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee----EeeeecCCCcce
Confidence 3568899999875 35789999999999986533789999999999999999876421 112222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEE--------eeEecccCCCceeEEEEcC-------------CCeEEEEeeCCCe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDY-------------YGLRMATCSSDQN 129 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~-------------~~~~~~s~~~d~~ 129 (197)
.+++|+|+ +..++++ +++|+ ...+. .|...|.+++|++ +.-.|++++.|+.
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 183 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 183 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEECCCC----------CTTCEEEEEETTSC
T ss_pred EEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCe
Confidence 99999999 8887665 79999 33444 7899999999996 4555699999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccC---CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||+++.... ......+.+|...|.+++|+|+ +++|++++.||.|++||++...
T Consensus 184 i~i~d~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 184 VKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred EEEEEecCCCcc-eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 999999763211 3456678899999999999999 8999999999999999998753
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-25 Score=164.31 Aligned_cols=181 Identities=15% Similarity=0.148 Sum_probs=143.1
Q ss_pred ccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 7 QSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 7 ~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.||.|++||+.+.+...... ...+...+.+
T Consensus 27 ~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~v~~ 101 (372)
T 1k8k_C 27 PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYVWTLKGRTWKPTLV---ILRINRAARC 101 (372)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEEEETTEEEEEEE---CCCCSSCEEE
T ss_pred eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC--CCEEEEEcCCCeEEEEECCCCeeeeeEE---eecCCCceeE
Confidence 467889999754 357789999999999998 9999999999999999997765322211 1223678999
Q ss_pred EEEccCCCcccce-----eEEEEe---------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc------
Q psy13207 80 LTWNHSFSRFNSI-----SIMYEA---------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT------ 139 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~------ 139 (197)
++|+|++++++++ +++|++ ..+...|...|.+++|+++.-+|++++.|+.|++||++...
T Consensus 102 ~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 102 VRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp EEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred EEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc
Confidence 9999999998766 789982 23323688999999999554444999999999999964210
Q ss_pred -------ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 140 -------RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 140 -------~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
......+..+.+|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 01246777788899999999999999999999999999999999877655544
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-25 Score=173.88 Aligned_cols=171 Identities=20% Similarity=0.350 Sum_probs=140.5
Q ss_pred cccccccceeee----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTR----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..++.+++|+. ...+.+|...|.+++|+|+ +++|++++.|+.|++||... +.+..+ ..+...+.+++
T Consensus 362 ~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~~~~-~~~~~~-----~~~~~~v~~~~ 433 (577)
T 2ymu_A 362 ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNRNG-QLLQTL-----TGHSSSVWGVA 433 (577)
T ss_dssp EETTSEEEEEETTCCEEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEECTTC-CEEEEE-----ECCSSCEEEEE
T ss_pred EeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEeCCC-CEEEEe-----cCCCCCeEEEE
Confidence 356788899974 3457889999999999999 99999999999999999643 222111 12367899999
Q ss_pred EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
|+|++++++++ +++|+ +..+. +|...|.+++|+|+.-+|++++.|+.|++||.. .+.+..+.+
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~------~~~~~~~~~ 506 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTG 506 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSEEEEEETT------SCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC------CCEEEEEeC
Confidence 99999998765 79999 66677 899999999999555455999999999999964 567788899
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
|...|.+++|+|+|++|++++.||.|++||. +++.+..+.
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence 9999999999999999999999999999996 344444443
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-25 Score=166.20 Aligned_cols=172 Identities=16% Similarity=0.201 Sum_probs=138.8
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccce-eccceec-c
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQW-CLQHEVA-C 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~-~~~~~~~-~ 73 (197)
+..++.+++|++.. .+.+|.++|.+++|+| + +++|++|+.||+|++||+.++...... .....+. +
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN--DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTC--TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCC--CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 45678999998632 3678999999999999 7 899999999999999999877432211 1122233 3
Q ss_pred CCCeeeEEEccCC-Ccccce-----eEEEE------eeEe--cccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccC
Q psy13207 74 PTLASCLTWNHSF-SRFNSI-----SIMYE------AHSI--NAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 74 ~~~~~~~~~~~~~-~~~~~~-----~~~~~------~~~~--~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
...|.+++|+|++ ..++++ +++|| +..+ . .|...|.+++|+ ++.+ ++++.|+.|++||+++
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l--~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD-VHPDTIYSVDWSRDGALI--CTSCRDKRVRVIEPRK 207 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT-TCCSCEEEEEECTTSSCE--EEEETTSEEEEEETTT
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC-CCCCceEEEEECCCCCEE--EEEecCCcEEEEeCCC
Confidence 6789999999998 466554 89999 5566 5 799999999999 5556 9999999999999986
Q ss_pred Ccccceeeeeee-cCceec-EEEEEEccCCCEEEEE---eCCCcEEEEEcCCCcc
Q psy13207 138 GTRFDIETIGNF-EDHYCT-VWRVSWNITGTIVASS---GDDGCVRLWKLKKKRK 187 (197)
Q Consensus 138 ~~~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~l~~~---~~dg~i~iw~~~~~~~ 187 (197)
...+..+ .+|... +.+++|+|++++|++| +.|+.|++||+++.+.
T Consensus 208 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 208 -----GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp -----TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred -----CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 5666666 678765 8999999999999999 7999999999987654
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-25 Score=166.90 Aligned_cols=172 Identities=17% Similarity=0.211 Sum_probs=136.6
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccce--eccCCCee
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--VACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--~~~~~~~~ 78 (197)
+..|+++++|++.. ....+...+.+++|+| + +.+|++|+.|+.|++||+.++..+..+..... ..+...+.
T Consensus 183 ~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 183 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD--GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT--CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE
T ss_pred ecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC--CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE
Confidence 45788999998642 1123667899999999 6 89999999999999999988765443321111 12367899
Q ss_pred eEEEccCCCcccce-----eEEEEee------------------EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEc
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYEAH------------------SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~~------------------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 135 (197)
+++|+|++.+++++ +++||+. .+. +|...|.+++|+++.-+|++|+.|+.|++||.
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 99999999998766 7999932 344 78899999999944334499999999999999
Q ss_pred cCCcccceeeeeeecCceecEEEEEEcc------CCCEEEEEeCCCcEEEEEcCCC
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNI------TGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p------~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
++ ...+..+.+|...|.+++|+| ++++|++|+.||+|++|+++..
T Consensus 340 ~~-----~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 340 KS-----GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TT-----CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CC-----CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 77 677788899999999999986 6889999999999999998653
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-24 Score=162.81 Aligned_cols=181 Identities=22% Similarity=0.301 Sum_probs=140.9
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|+.+++|++.. .+.+|...|.+++|+|+..+.+|++++.|+.|++||+.......... ...+...+.
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~v~ 151 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII---IDAHAIGVN 151 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE---EECCTTCEE
T ss_pred eccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE---ecCCCCceE
Confidence 45688999998653 46689999999999997335789999999999999998764332221 112367899
Q ss_pred eEEEcc-------------CCCcccce-----eEEEE----------eeEecccCCCceeEEEEcCC---CeEEEEeeCC
Q psy13207 79 CLTWNH-------------SFSRFNSI-----SIMYE----------AHSINAEHKDLIHDVAYDYY---GLRMATCSSD 127 (197)
Q Consensus 79 ~~~~~~-------------~~~~~~~~-----~~~~~----------~~~~~~~~~~~i~~~~~~~~---~~~~~s~~~d 127 (197)
+++|+| ++..++++ +++|| +..+. +|...|.+++|+++ .-+|++++.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 999999 57777665 79998 24555 79999999999976 5666999999
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.|++||+++........+.....|...|.+++|+|++++|++++.||.|++|+++....+..
T Consensus 231 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred CEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 999999998632211223333445888999999999999999999999999999986554443
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-24 Score=160.68 Aligned_cols=164 Identities=17% Similarity=0.131 Sum_probs=128.0
Q ss_pred eeeeeeeecCCCcceeEEEE-----CC-CCCCcEEEEEeCCCcEEEEEcCCcccccce-eccceec-cCCCeeeEEEccC
Q psy13207 14 QWTRRSNLVDSRTSVTDVKF-----GP-KQLGLVLATCAADGLVRIYEAPDVMNLSQW-CLQHEVA-CPTLASCLTWNHS 85 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~-----~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 85 (197)
...+...|.+|.++|+++.| ++ + +.+|+||+.|++|++||+...+..... .....+. +...|.+++|+|+
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d--~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENED--SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCC--CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCC--CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC
Confidence 34556789999999999999 66 6 899999999999999999765432111 1122333 3678999999999
Q ss_pred CCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee
Q psy13207 86 FSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154 (197)
Q Consensus 86 ~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~ 154 (197)
+.+++++ +++|| +..+. +|...|.+++|+++.-+|++++.|+.|++||+... .........+|..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE---CKFSSAEKENHSD 163 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC---EEEECCTTTSCSS
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC---ceeeeecccCCCc
Confidence 9998765 89999 56677 89999999999955444499999999999998631 0111122347889
Q ss_pred cEEEEEEccCC----------CEEEEEeCCCcEEEEEcC
Q psy13207 155 TVWRVSWNITG----------TIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 155 ~v~~~~~~p~~----------~~l~~~~~dg~i~iw~~~ 183 (197)
.|.+++|+|++ .+|++++.||+|++||..
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 99999999987 799999999999999953
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-26 Score=176.34 Aligned_cols=165 Identities=9% Similarity=0.064 Sum_probs=131.1
Q ss_pred cccccccceeeeee----------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc
Q psy13207 6 LQSEKCLNQWTRRS----------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 69 (197)
+..|+++++|++.. .+.+|...|.+++|+|+ + .|++|+.||+|++||++++.... .
T Consensus 231 ~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~-~lasgs~DgtV~lWD~~~~~~~~-----~ 302 (524)
T 2j04_B 231 VSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--T-TVVCGFKNGFVAEFDLTDPEVPS-----F 302 (524)
T ss_dssp EETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--S-EEEEEETTSEEEEEETTBCSSCS-----E
T ss_pred EecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--C-eEEEEeCCCEEEEEECCCCCCce-----E
Confidence 45689999998742 46789999999999985 5 79999999999999998763221 1
Q ss_pred eec-cCCCeeeE--EEccCC-Ccccce-----eEEEE------eeEecccCCC--ceeEEEEcCCCeEEEEeeCCCeEEE
Q psy13207 70 EVA-CPTLASCL--TWNHSF-SRFNSI-----SIMYE------AHSINAEHKD--LIHDVAYDYYGLRMATCSSDQNIKV 132 (197)
Q Consensus 70 ~~~-~~~~~~~~--~~~~~~-~~~~~~-----~~~~~------~~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~~ 132 (197)
.+. +...|.++ .|+|++ .+++++ +++|| +..+. +|.. .|.+++|+|+.-.|++++.|+.|++
T Consensus 303 ~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 303 YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 122 36789998 578887 677665 89999 33444 5543 4889999965434499999999999
Q ss_pred EEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
||+++ ..++..+.+|...|++++|+|+|++|++|+.||+|++||+..
T Consensus 382 wd~~~-----~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 382 VPSRA-----AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EETTC-----TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EECcc-----cccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 99986 455566778999999999999999999999999999999864
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-25 Score=164.54 Aligned_cols=178 Identities=13% Similarity=0.087 Sum_probs=139.0
Q ss_pred cccccccceeeeee-----ee--cCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-----NL--VDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~--~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
+..|+.+++|++.. .+ .+|...|.+++|+| + +.+|++++.|+.|++||+... ....+. ........+
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~-~~~~~~--~~~~~~~~v 166 (383)
T 3ei3_B 92 GSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN--TNQLFVSSIRGATTLRDFSGS-VIQVFA--KTDSWDYWY 166 (383)
T ss_dssp EEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE--EEEEEEEETTTEEEEEETTSC-EEEEEE--CCCCSSCCE
T ss_pred EcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC--CCEEEEEeCCCEEEEEECCCC-ceEEEe--ccCCCCCCe
Confidence 45688999998752 23 47999999999999 5 799999999999999999853 221111 111124679
Q ss_pred eeEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 78 SCLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.+++|+|++.+++++ +++|| +..+. .|...|.+++|+++.- +|++++.|+.|++||+++.... ...+
T Consensus 167 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~ 244 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-NSYI 244 (383)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-TCEE
T ss_pred EEEEECCCCCEEEEECCCCCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-cceE
Confidence 999999999998765 79999 56667 8999999999994422 3399999999999999763211 2334
Q ss_pred eeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 147 GNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+ +|...|.+++|+| ++++|++++.|+.|++||+++.+....+
T Consensus 245 ~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 245 AEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 444 6899999999999 9999999999999999999887654443
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=162.96 Aligned_cols=176 Identities=12% Similarity=0.126 Sum_probs=132.4
Q ss_pred ccccccceeeeeee--------------ecCCCcceeEEEECCCCCCcEEE--EEeCCCcEEEEEcCCcccccceeccce
Q psy13207 7 QSEKCLNQWTRRSN--------------LVDSRTSVTDVKFGPKQLGLVLA--TCAADGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 7 ~~~~~~~~w~~~~~--------------~~~h~~~v~~~~~~~~~~~~~l~--s~~~dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
..++.+|+|++... ...+...+.+++|+|+ |++++ +++.|++|+|||+.+.+.+..
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD--g~~la~as~~~d~~i~iwd~~~~~~~~~------ 172 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE--GTVAAIASSKVPAIMRIIDPSDLTEKFE------ 172 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT--SSCEEEEESCSSCEEEEEETTTTEEEEE------
T ss_pred cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC--CCEEEEEECCCCCEEEEeECCCCcEEEE------
Confidence 45778888876421 1234556899999999 88876 455899999999998765432
Q ss_pred eccCCCeeeEEEccCCCcccce----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCC----eEEEEEc
Q psy13207 71 VACPTLASCLTWNHSFSRFNSI----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ----NIKVTRD 135 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~----~i~~~d~ 135 (197)
+.+...|.+++|+|++++++++ +.+|+ .......|...|.+++|+|+.-++++++.|+ .+++|+.
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 3346679999999999998765 56776 1122226888999999996555558888876 6788888
Q ss_pred cCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..... .......+.+|...|++++|+|+|++||+|+.|++|+|||+++++.+..+
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 253 KSGNT-SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp ETTEE-EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cccee-cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 65211 12234567789999999999999999999999999999999998776553
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-24 Score=158.36 Aligned_cols=163 Identities=18% Similarity=0.326 Sum_probs=129.0
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEcc--CCCcccce---
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNH--SFSRFNSI--- 92 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~--- 92 (197)
..+.+|.++|++++|+|+ +++|++|+.||.|++||+.+.... +.....+. +...|.+++|+| ++.+++++
T Consensus 5 ~~~~gH~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFY--GRHVATCSSDQHIKVFKLDKDTSN--WELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CEECCCSSCEEEEEECSS--SSEEEEEETTSEEEEEEECSSSCC--EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccCcccccceeEEEEcCC--CCEEEEeeCCCeEEEEECCCCCCc--ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 457899999999999998 999999999999999999875432 12223333 377899999999 57887765
Q ss_pred --eEEEEe---------------eEecccCCCceeEEEEcCC--CeEEEEeeCCCeEEEEEccCCcccc-----------
Q psy13207 93 --SIMYEA---------------HSINAEHKDLIHDVAYDYY--GLRMATCSSDQNIKVTRDVMGTRFD----------- 142 (197)
Q Consensus 93 --~~~~~~---------------~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~~~~~----------- 142 (197)
+++|++ ..+. .|...|.+++|+++ .-+|++++.|+.|++||+++.....
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CeEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 799993 2344 78999999999955 4445999999999999987532110
Q ss_pred --------------------------------------------eeeeeeecCceecEEEEEEccCC----CEEEEEeCC
Q psy13207 143 --------------------------------------------IETIGNFEDHYCTVWRVSWNITG----TIVASSGDD 174 (197)
Q Consensus 143 --------------------------------------------~~~~~~~~~h~~~v~~~~~~p~~----~~l~~~~~d 174 (197)
...+..+.+|...|.+++|+|++ ++|++++.|
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 01255567899999999999998 899999999
Q ss_pred CcEEEEEcCCCc
Q psy13207 175 GCVRLWKLKKKR 186 (197)
Q Consensus 175 g~i~iw~~~~~~ 186 (197)
|.|++||++...
T Consensus 240 g~i~iwd~~~~~ 251 (351)
T 3f3f_A 240 GRIRIFKITEKL 251 (351)
T ss_dssp SCEEEEEEEECC
T ss_pred CeEEEEeCCCCc
Confidence 999999998754
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=165.55 Aligned_cols=171 Identities=14% Similarity=0.162 Sum_probs=128.8
Q ss_pred ccccceeeeeeeecC------CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-----ccceeccceecc-C--
Q psy13207 9 EKCLNQWTRRSNLVD------SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-----LSQWCLQHEVAC-P-- 74 (197)
Q Consensus 9 ~~~~~~w~~~~~~~~------h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-----~~~~~~~~~~~~-~-- 74 (197)
+.....|++.+.+.. |.+.|.+++|+|+ |++|++|+.||.|+||++.+.+. ...+.....+.+ .
T Consensus 6 ~~~~~~w~~~q~~~~~~~~~~~~~~V~~v~~s~~--g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 83 (447)
T 3dw8_B 6 GGNDIQWCFSQVKGAVDDDVAEADIISTVEFNHS--GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPE 83 (447)
T ss_dssp --CCCCCEEEECCSCSSSCCCGGGSEEEEEECSS--SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCE
T ss_pred CCcceeEEEEEecccccccccccCcEEEEEECCC--CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccc
Confidence 445567777665433 6789999999998 99999999999999999987652 111222222322 3
Q ss_pred ----------CCeeeEEEccCC--Ccccce-----eEEEEeeE-------------------------------------
Q psy13207 75 ----------TLASCLTWNHSF--SRFNSI-----SIMYEAHS------------------------------------- 100 (197)
Q Consensus 75 ----------~~~~~~~~~~~~--~~~~~~-----~~~~~~~~------------------------------------- 100 (197)
..|.+++|+|++ ..++++ +++|++..
T Consensus 84 ~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 163 (447)
T 3dw8_B 84 FDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLM 163 (447)
T ss_dssp EEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEE
T ss_pred ccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchhee
Confidence 779999999998 566554 89999432
Q ss_pred ---------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee-------eecCceecEEEEEEccC
Q psy13207 101 ---------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG-------NFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 101 ---------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~p~ 164 (197)
.. +|...|.+++|+++.-+|++| .|+.|++||+++. ...+. .+.+|...|.+++|+|+
T Consensus 164 ~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 164 VEASPRRIFAN-AHTYHINSISINSDYETYLSA-DDLRINLWHLEIT----DRSFNIVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp EEEEEEEEECS-CCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEE----EEEEEEEECCCSSGGGCCCCEEEEEECSS
T ss_pred eeccceEEecc-CCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCC----CceeeeeecccccccccCcceEEEEECCC
Confidence 24 799999999999444444888 8999999999731 23333 36689999999999999
Q ss_pred C-CEEEEEeCCCcEEEEEcCCCcc
Q psy13207 165 G-TIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 165 ~-~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+ ++|++++.||.|++||++++..
T Consensus 238 ~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 238 SCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp CTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCcEEEEEeCCCeEEEEECcCCcc
Confidence 8 9999999999999999998764
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=169.55 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=127.4
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc-CCCcccc
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH-SFSRFNS 91 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (197)
+.|.+.....+|...|+|++|+|.+ +.+||+|+.||+|+|||+.+.+...... ...+...|.+++|+| ++.+|++
T Consensus 107 ~~~~~~~~~~~~~~~V~~l~~~P~~-~~~lasGs~dg~i~lWd~~~~~~~~~~~---~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 107 DSYRILQKAAPFDRRATSLAWHPTH-PSTVAVGSKGGDIMLWNFGIKDKPTFIK---GIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp TTTTSCCEEEECSSCEEEEEECSSC-TTCEEEEETTSCEEEECSSCCSCCEEEC---CCSSSCCCCEEEECSSCTTEEEE
T ss_pred cceeecccCCCCCCCEEEEEEeCCC-CCEEEEEeCCCEEEEEECCCCCceeEEE---ccCCCCCEEEEEEeCCCCCEEEE
Confidence 4445555667899999999999952 6799999999999999998765432211 112367899999998 5677766
Q ss_pred e-----eEEEE-----eeEecc--cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 92 I-----SIMYE-----AHSINA--EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 92 ~-----~~~~~-----~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+ +++|| +..+.. .+...+.+++|+++.-+|++|+.||.|++||++. +.+..+.+|...|.++
T Consensus 183 ~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------~~~~~~~~h~~~v~~v 256 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------KELWNLRMHKKKVTHV 256 (435)
T ss_dssp ECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------CBCCCSBCCSSCEEEE
T ss_pred EeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------ceeEEEecccceEEee
Confidence 5 89999 223321 2344678899985444449999999999999863 5567788999999999
Q ss_pred EEccCCC-EEEEEeCCCcEEEEEcCCCcch
Q psy13207 160 SWNITGT-IVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 160 ~~~p~~~-~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+|+|++. +|++++.|++|++||+++.+..
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~ 286 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKIWDLRQVRGK 286 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCEEETTTCCSS
T ss_pred eecCCCceEEEEecCcceeeEEeccccccc
Confidence 9999875 7889999999999999876543
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=173.67 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=131.7
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECCC----CCCcEEEEEeCCCcEEEEEcCCcccccc----e-ec
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPK----QLGLVLATCAADGLVRIYEAPDVMNLSQ----W-CL 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~----~~~~~l~s~~~dg~v~iw~~~~~~~~~~----~-~~ 67 (197)
+..|+++++|++.. .+.+|.+.|.+++|+|+ +++.+||+++.||+|+|||+..+..... . ..
T Consensus 179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 56788999998742 24577889999999995 1257999999999999999986643210 0 01
Q ss_pred cceec-cCCCeeeEEEccCCCcccce-----eEEEEe-------eEecccCCCceeEEE--EcCCC-eEEEEeeCCCeEE
Q psy13207 68 QHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYEA-------HSINAEHKDLIHDVA--YDYYG-LRMATCSSDQNIK 131 (197)
Q Consensus 68 ~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~~~i~~~~--~~~~~-~~~~s~~~d~~i~ 131 (197)
...+. +...+.+++|++++ .|+++ +++||+ ..+. +|...|.+++ |+++. -+|+||+.|++|+
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 11222 25789999999875 56554 899992 2456 8999999994 55432 2339999999999
Q ss_pred EEEccCCcccceeeeeeecCcee--cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYC--TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+||+++ .++...+.+|.. .|.+++|+|+++.+++++.|++|++||++++.....+.
T Consensus 337 lWD~~~-----~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 337 IFNPKD-----IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp EECGGG-----HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred EEECCC-----CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee
Confidence 999976 444444555543 47899999999999999999999999999876544443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=164.02 Aligned_cols=170 Identities=15% Similarity=0.163 Sum_probs=133.8
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|++. ..+.+|...|.+++|+|+ +++|++|+.|++|++||+.+++.+..+. .+...|.++
T Consensus 115 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~ 187 (420)
T 3vl1_A 115 GTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS--GEALISSSQDMQLKIWSVKDGSNPRTLI-----GHRATVTDI 187 (420)
T ss_dssp EETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCCCEEEE-----CCSSCEEEE
T ss_pred EECCCCEEEEeCCCcceeeecccccCccEEEEECCC--CCEEEEEeCCCeEEEEeCCCCcCceEEc-----CCCCcEEEE
Confidence 3567889999754 346799999999999998 9999999999999999999876543332 236789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecc--cCCCceeEEEE---------------------cCCCeEEEEeeC
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINA--EHKDLIHDVAY---------------------DYYGLRMATCSS 126 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~--~~~~~i~~~~~---------------------~~~~~~~~s~~~ 126 (197)
+|+|++..++++ +++|| +..+.. .+...+.+++| +++.-+|++++.
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 999999988765 89999 334431 24444555554 544445599999
Q ss_pred CCeEEEEEccCCcccceeeeee-ecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCcc
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~~ 187 (197)
|+.|++||+++ ...+.. ...|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 268 dg~i~i~d~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 268 SGVITVHNVFS-----KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TSCEEEEETTT-----CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred CCeEEEEECCC-----CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 99999999986 344443 345888999999999998 999999999999999988654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-24 Score=165.23 Aligned_cols=173 Identities=13% Similarity=0.160 Sum_probs=143.4
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|+.. ..+.+|.++|.+++|+|+ + .|++|+.||+|++||+.+++.+..+. .+...+.++
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~l 209 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG--G-ILVSGSTDRTVRVWDIKKGCCTHVFE-----GHNSTVRCL 209 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST--T-EEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC--C-EEEEEeCCCCEEEEECCCCcEEEEEC-----CCCCccEEE
Confidence 4678999999853 468899999999999997 6 89999999999999999876543222 136789999
Q ss_pred EEcc--CCCcccce-----eEEEEee-----------------------------EecccCCCceeEEEEcCCCeEEEEe
Q psy13207 81 TWNH--SFSRFNSI-----SIMYEAH-----------------------------SINAEHKDLIHDVAYDYYGLRMATC 124 (197)
Q Consensus 81 ~~~~--~~~~~~~~-----~~~~~~~-----------------------------~~~~~~~~~i~~~~~~~~~~~~~s~ 124 (197)
+|++ ++.+++++ +++|++. .+. +|...+.++..+++.+ +++
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~~~ 286 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR-GHMASVRTVSGHGNIV--VSG 286 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC-CCSSCEEEEEEETTEE--EEE
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc-CccceEEEEcCCCCEE--EEE
Confidence 9985 56667655 7999921 334 6888888887778888 999
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
+.|+.|++||+++ .+.+..+.+|...|.+++|+|+++++++|+.||.|++||+++++....+..+
T Consensus 287 ~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 287 SYDNTLIVWDVAQ-----MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp ETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eCCCeEEEEECCC-----CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 9999999999976 6778888999999999999999999999999999999999988766655443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=164.74 Aligned_cols=166 Identities=11% Similarity=0.176 Sum_probs=129.5
Q ss_pred eee-cCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 19 SNL-VDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 19 ~~~-~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..+ .+|.++|++++|+| + +.+|++|+.||+|++||+.+......+.....+.+...|.+++|+|++..++++
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGE--TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEECTTTTSCEEEEEEECSS--SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeccCCCCceEEEEECCCC--CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 456 88999999999999 8 999999999999999998763221112222233457899999999999988765
Q ss_pred -eEEEEeeEe---------c---------cc--CCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 93 -SIMYEAHSI---------N---------AE--HKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 93 -~~~~~~~~~---------~---------~~--~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+++|++... . .. +...+.++.+. ++.-+|++++.|+.|++||+++ .+.+..+
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~ 208 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT-----LERLQII 208 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT-----CCEEEEE
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----CeeeEEE
Confidence 799984211 0 01 45667777744 4444559999999999999987 6677777
Q ss_pred cC--ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 150 ED--HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 150 ~~--h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.+ |...|.+++|+|++++|++|+.||.|++||+++++....+
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEE
Confidence 77 8899999999999999999999999999999987665543
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-24 Score=158.24 Aligned_cols=172 Identities=14% Similarity=0.205 Sum_probs=130.3
Q ss_pred cccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+.+++|+.. ..+.+|...+.+++|+++....++++++.|+.|++||+.+.+....+. .+...|.+
T Consensus 146 ~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-----~h~~~v~~ 220 (340)
T 4aow_A 146 GSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-----GHTGYLNT 220 (340)
T ss_dssp EETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEE
T ss_pred ecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-----CCCCcEEE
Confidence 3567888888753 235689999999999987435678999999999999998876443221 23678999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccc----e
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFD----I 143 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~----~ 143 (197)
++|+|++++++++ +++|| +..+. +...+.+++|+ ...+ ++++.|+.|++||+++..... .
T Consensus 221 ~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~--~~~~~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 221 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPNRYW--LCAATGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CSSCEEEEEECSSSSE--EEEEETTEEEEEETTTTEEEEEECCC
T ss_pred EEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--CCceEEeeecCCCCce--eeccCCCEEEEEECCCCeEEEecccc
Confidence 9999999998765 79999 44444 55689999999 4556 788889999999997621110 0
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
.......+|...|++++|+|+|++|++|+.||.|++||++++.
T Consensus 297 ~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 297 VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 1112345688999999999999999999999999999999875
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-24 Score=160.49 Aligned_cols=168 Identities=16% Similarity=0.210 Sum_probs=136.9
Q ss_pred ccccccceeeeee----------------ee-------cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc
Q psy13207 7 QSEKCLNQWTRRS----------------NL-------VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS 63 (197)
Q Consensus 7 ~~~~~~~~w~~~~----------------~~-------~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~ 63 (197)
..++.+++|++.. .+ ..|...|.+++|+|+ + +|++++.||.|++||+++.+.+.
T Consensus 145 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 145 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNGTVQISELSTLRPLY 221 (397)
T ss_dssp ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTSEEEEEETTTTEEEE
T ss_pred eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC--c-eEEEEeCCCcEEEEECCCCceeE
Confidence 4578889998876 55 448899999999998 8 99999999999999999876543
Q ss_pred ceeccceecc---CCCeeeEEEccCCCcccc--------eeEEEE------eeEeccc-------------CCCceeEEE
Q psy13207 64 QWCLQHEVAC---PTLASCLTWNHSFSRFNS--------ISIMYE------AHSINAE-------------HKDLIHDVA 113 (197)
Q Consensus 64 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--------~~~~~~------~~~~~~~-------------~~~~i~~~~ 113 (197)
.+... ..+ ...+.+++|+|++.++++ .+++|| +..+. . |...|.+++
T Consensus 222 ~~~~~--~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 222 NFESQ--HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp EEECC--C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC-BC--------CCBSBSSCEEEEE
T ss_pred EEecc--ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec-cCcccccccccccccCCcEEEEE
Confidence 33310 002 568999999999998754 378999 55666 6 899999999
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec------Cc---------------eecEEEEEEccCC-------
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE------DH---------------YCTVWRVSWNITG------- 165 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~------~h---------------~~~v~~~~~~p~~------- 165 (197)
|+++.-+|++++.|+.|++||+++ .+.+..+. +| ...|.+++|+|++
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKT-----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTT-----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCC-----CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 994444449999999999999976 56677777 77 8999999999998
Q ss_pred ---CEEEEEeCCCcEEEEEcCCC
Q psy13207 166 ---TIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 166 ---~~l~~~~~dg~i~iw~~~~~ 185 (197)
++|++++.||.|++|+++++
T Consensus 374 ~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 374 DLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999999875
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-24 Score=173.63 Aligned_cols=174 Identities=12% Similarity=0.105 Sum_probs=133.5
Q ss_pred eeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce-
Q psy13207 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 15 w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 92 (197)
..+...+.+|.+.|++++|+|++ +++|+||+.|++|++|++.......... ...+. +...|.+++|+|++++++++
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~-~~~l~s~s~D~~i~~W~~~~~~~~~~~~-~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDN-ADIIVSASRDKSIILWKLTKDDKAYGVA-QRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTC-CSEEEEEETTSEEEEEECCCSTTCSCEE-EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cchhhhcccCCceeEEEEecCCC-CCEEEEEeCCCcEEEEEccCCCcccccc-cceecCCCCcEEEEEECCCCCEEEEEe
Confidence 34556789999999999999962 5799999999999999997654321111 12222 36789999999999998776
Q ss_pred ----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 ----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 ----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||..... .........+|...|.+++|+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC--KYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEECSSTTSCSSCEEEEEEC
T ss_pred CCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc--ceeeccCCCCCCCcEEEEEEe
Confidence 89999 56677 899999999999433333999999999999986410 011112235788999999999
Q ss_pred cCC--CEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 163 ITG--TIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 163 p~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
|++ .+|++++.|++|++||+++.+....+..
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 559 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG 559 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 986 6899999999999999988765554443
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=158.89 Aligned_cols=167 Identities=14% Similarity=0.182 Sum_probs=131.9
Q ss_pred eecCCCcceeEEEECCC--CCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC----CCcccce-
Q psy13207 20 NLVDSRTSVTDVKFGPK--QLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS----FSRFNSI- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~--~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 92 (197)
...+|.++|.+++|+|+ .....+++++.++.|++||+.+++.+..+.......+...+.+++|+|+ +.+++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 35589999999999983 0144566666677999999998766544442222224678999999999 5567655
Q ss_pred ----eEEEE------eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeee---cCceecEEE
Q psy13207 93 ----SIMYE------AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF---EDHYCTVWR 158 (197)
Q Consensus 93 ----~~~~~------~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~---~~h~~~v~~ 158 (197)
+++|+ +..+. +|...|.+++|++ +.-+|++++.|+.|++||+++ .+.+..+ .+|...|.+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-----DTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-----TEEEEEECSTTSCSSCEEE
T ss_pred CCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-----CeEEEEecccccccCceeE
Confidence 89999 56677 8999999999995 444459999999999999976 4556665 689999999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 159 VSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 159 ~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
++|+|++++|++++.||.|++||+++.+....+.
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccc
Confidence 9999999999999999999999999876555444
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=165.31 Aligned_cols=182 Identities=10% Similarity=0.161 Sum_probs=136.2
Q ss_pred cccccccceeeee----------------eeecCCC------------cceeEEEECCCCCC--cEEEEEeCCCcEEEEE
Q psy13207 6 LQSEKCLNQWTRR----------------SNLVDSR------------TSVTDVKFGPKQLG--LVLATCAADGLVRIYE 55 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------------~~~~~h~------------~~v~~~~~~~~~~~--~~l~s~~~dg~v~iw~ 55 (197)
+..|+.+++|++. ..+.+|. .+|.+++|+|+ + ..|++++.|++|++|+
T Consensus 46 g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~--~~~~~l~s~s~d~~i~iw~ 123 (447)
T 3dw8_B 46 GDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ--KNAAQFLLSTNDKTIKLWK 123 (447)
T ss_dssp EETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC--CSSSEEEEEECSSCEEEEE
T ss_pred EcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC--CCcceEEEeCCCCeEEEEe
Confidence 4568889999853 4677898 88999999998 6 7899999999999999
Q ss_pred cCCcccccc-------------------ee--------------ccce--eccCCCeeeEEEccCCCcccce----eEEE
Q psy13207 56 APDVMNLSQ-------------------WC--------------LQHE--VACPTLASCLTWNHSFSRFNSI----SIMY 96 (197)
Q Consensus 56 ~~~~~~~~~-------------------~~--------------~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~ 96 (197)
+.+...... +. .... ..+...|.+++|+|+++.++++ +++|
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iw 203 (447)
T 3dw8_B 124 ISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLW 203 (447)
T ss_dssp EEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEE
T ss_pred cccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEE
Confidence 876432100 00 0001 1236789999999999998776 8999
Q ss_pred Eee--------------EecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee-------
Q psy13207 97 EAH--------------SINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC------- 154 (197)
Q Consensus 97 ~~~--------------~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~------- 154 (197)
|+. .+. .|...|.+++|+++. -+|++|+.|+.|++||+++.... ...+..+.+|..
T Consensus 204 d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~ 281 (447)
T 3dw8_B 204 HLEITDRSFNIVDIKPANME-ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC-DRHSKLFEEPEDPSNRSFF 281 (447)
T ss_dssp ETTEEEEEEEEEECCCSSGG-GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS-CTTCEEECCC-----CCHH
T ss_pred ECCCCCceeeeeeccccccc-ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc-cceeeEeccCCCccccccc
Confidence 922 234 789999999999543 33499999999999999863210 111566777765
Q ss_pred -----cEEEEEEccCCCEEEEEeCCCcEEEEEcCC-Ccchhhhh
Q psy13207 155 -----TVWRVSWNITGTIVASSGDDGCVRLWKLKK-KRKKKKEE 192 (197)
Q Consensus 155 -----~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~ 192 (197)
.|.+++|+|+|++|++++. +.|++||+++ ++....+.
T Consensus 282 ~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 282 SEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp HHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred cccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 8999999999999999998 9999999987 55554443
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-24 Score=157.92 Aligned_cols=173 Identities=13% Similarity=0.127 Sum_probs=140.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++.+..+. ....+.++
T Consensus 50 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~ 121 (369)
T 3zwl_B 50 CSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF--TKYCVTGSADYSIKLWDVSNGQCVATWK------SPVPVKRV 121 (369)
T ss_dssp EESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEE------CSSCEEEE
T ss_pred EeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCcEEEEee------cCCCeEEE
Confidence 3568899999753 468899999999999998 9999999999999999999876544332 46789999
Q ss_pred EEccCCCcccc----------eeEEEEee-----------------EecccCCC--ceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 81 TWNHSFSRFNS----------ISIMYEAH-----------------SINAEHKD--LIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 81 ~~~~~~~~~~~----------~~~~~~~~-----------------~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
+|+|++.++++ .+.+|++. .+. .|.. .+.+++|+++.-.|++++.|+.|+
T Consensus 122 ~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 122 EFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDAATVAGWSTKGKYIIAGHKDGKIS 200 (369)
T ss_dssp EECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccceeEEEEcCCCCEEEEEcCCCEEE
Confidence 99999998764 47889822 222 3444 899999994433349999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+||+++. ...+..+..|...|.+++|+|++++|++++.||.|++||+++.+....+
T Consensus 201 i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 201 KYDVSNN----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEETTTT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEECCCC----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 9999752 4567778889999999999999999999999999999999987655443
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-24 Score=162.03 Aligned_cols=177 Identities=15% Similarity=0.237 Sum_probs=134.5
Q ss_pred cccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.++.|+.. ..+.+|...+..+.|+|+ +.++++++.|+.+++|+..+++..... +.....+...|.+
T Consensus 205 gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~--g~~l~s~~~D~~v~i~~~~~~~~~~~~-~~~~~~~~~~V~~ 281 (420)
T 4gga_A 205 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVP-LQTFTQHQGAVKA 281 (420)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCCSSCSCC-SEEECCCSSCEEE
T ss_pred EeCCCceeEeeecccceeeEEecccccceeeeeecCC--CCeeeeeeccccceEEeecccccccee-eeeecccCCceee
Confidence 4556677777643 357899999999999999 999999999999999999876533211 1122223678999
Q ss_pred EEEccCCCccc-c-------eeEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 80 LTWNHSFSRFN-S-------ISIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 80 ~~~~~~~~~~~-~-------~~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
++|+|.+..+. + .+++|| +..+. +...+.++.|+ ++.+..++|+.|+.|++||.++ .
T Consensus 282 ~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~-----~ 354 (420)
T 4gga_A 282 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-----M 354 (420)
T ss_dssp EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----C
T ss_pred eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC-----C
Confidence 99999877653 2 289999 33343 45678888888 4555223345799999999987 7
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+++..+.+|...|.+++|+|+|++|++|+.|++|++||+......+..+
T Consensus 355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 355 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRE 403 (420)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhh
Confidence 7888999999999999999999999999999999999998765544443
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.2e-24 Score=155.37 Aligned_cols=160 Identities=16% Similarity=0.117 Sum_probs=131.9
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
..+|..+|.+++|+|+ +++|++++ ||.|++|++.+..............+...+.+++|+|+++.++++ +++
T Consensus 47 ~~~h~~~v~~~~~~~~--~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNP--TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EECCSSCCCEEEECSS--SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eccCCCceEEEEEecC--CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 3479999999999998 99999999 999999999877544333322222346789999999999988765 799
Q ss_pred EE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
|+ ...+. .|...+.+++|+++.-++++++.|+.|++||+++ .+.+..+..|...|.+++|+|++++
T Consensus 124 ~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 124 WDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp EECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-----CceeeeeecccCceEEEEECCCCCE
Confidence 99 33445 7888999999995443449999999999999976 6777788889999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcchh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
|++++.||.|++||+++++...
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQ 219 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEecCCcEEEEECCCCceEe
Confidence 9999999999999998876543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-24 Score=159.67 Aligned_cols=171 Identities=11% Similarity=-0.006 Sum_probs=125.6
Q ss_pred cccccccceeeee---------------eeecCCCcceeEEEECC--CCCCcEEEEEeCCCcEEEEEcCCcccccceecc
Q psy13207 6 LQSEKCLNQWTRR---------------SNLVDSRTSVTDVKFGP--KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------------~~~~~h~~~v~~~~~~~--~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~ 68 (197)
+..|+++++|+.. ....+|.++|.+++|+| + +++|++++.||+|++||+++++......
T Consensus 91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~-- 166 (343)
T 3lrv_A 91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVN--TEYFIWADNRGTIGFQSYEDDSQYIVHS-- 166 (343)
T ss_dssp ECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC-----CCEEEEEETTCCEEEEESSSSCEEEEEC--
T ss_pred ecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCC--CCEEEEEeCCCcEEEEECCCCcEEEEEe--
Confidence 4567888888533 12236778999999999 8 9999999999999999999876532111
Q ss_pred ceeccCCCeeeEEEccCCCcccce-----eEEEE------e-eEeccc-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEc
Q psy13207 69 HEVACPTLASCLTWNHSFSRFNSI-----SIMYE------A-HSINAE-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~-~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 135 (197)
......+.+++|+|++.+++++ +++|| + ..+. . |...|.+++|+++..+|++++ |+.|++||+
T Consensus 167 --~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 167 --AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp --CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred --cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 1124579999999999999875 89999 3 5677 6 999999999995555558888 559999999
Q ss_pred cCCcccceeeeeeecCceecEE--EEEEccCCCEEEEEeC-CCcEEEEEcCCCc
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVW--RVSWNITGTIVASSGD-DGCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~--~~~~~p~~~~l~~~~~-dg~i~iw~~~~~~ 186 (197)
++.... ..+..+..|...+. +++|+|+|++|++++. |+.+++|++.+..
T Consensus 243 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 243 RKDVGT--LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp TSSTTC--BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCcc--eeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 873211 11222223444443 6999999999999998 9999999996543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-24 Score=161.81 Aligned_cols=171 Identities=15% Similarity=0.173 Sum_probs=141.2
Q ss_pred ccccccceeee----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc-------------
Q psy13207 7 QSEKCLNQWTR----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH------------- 69 (197)
Q Consensus 7 ~~~~~~~~w~~----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~------------- 69 (197)
..++.+++|+. ...+.+|..+|.+++|+|+ +++|++++.||.|++||+.+++.+..+....
T Consensus 127 ~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 127 VENGELRLWNKTGALLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp ETTSCEEEEETTSCEEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred eCCCeEEEEeCCCCeeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 46788999973 3457889999999999998 9999999999999999998765443222111
Q ss_pred -------------------------------------eec-cCCCeeeEEEccCCCcccce-----eEEEE------eeE
Q psy13207 70 -------------------------------------EVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHS 100 (197)
Q Consensus 70 -------------------------------------~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~ 100 (197)
.+. +...+.+++|+|++++++++ +++|+ +..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 205 DGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNC 284 (425)
T ss_dssp -CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEE
T ss_pred CcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceE
Confidence 111 25678999999999988765 79999 556
Q ss_pred ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
+. .|...|.+++|+++. ++++++.|+.|++||+++ ...+..+..|...|.+++|+|++++|++++.||.|++|
T Consensus 285 ~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 285 FY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-----NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp EC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-----TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-----CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 66 799999999999554 559999999999999976 66777888899999999999999999999999999999
Q ss_pred EcCCCc
Q psy13207 181 KLKKKR 186 (197)
Q Consensus 181 ~~~~~~ 186 (197)
|+++..
T Consensus 358 ~~~~~~ 363 (425)
T 1r5m_A 358 DLKKLN 363 (425)
T ss_dssp ECHHHH
T ss_pred ECCCCc
Confidence 998755
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=164.31 Aligned_cols=177 Identities=13% Similarity=0.209 Sum_probs=142.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.+++|++. ..+.+|..+|.+++|+| + +.+|++++.||.|++||+++++.+..+.. ...+...+.+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~ 166 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRD--PNLLLSVSKDHALRLWNIQTDTLVAIFGG--VEGHRDEVLS 166 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTTTEEEEEECS--TTSCSSCEEE
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCC--CCEEEEEeCCCeEEEEEeecCeEEEEecc--cccccCceeE
Confidence 4567889999754 45788999999999999 7 89999999999999999988765433210 0123678999
Q ss_pred EEEccCCCcccce-----eEEEEeeE------ec---------------------------ccCCCceeEEEEcCCCeEE
Q psy13207 80 LTWNHSFSRFNSI-----SIMYEAHS------IN---------------------------AEHKDLIHDVAYDYYGLRM 121 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~~~~------~~---------------------------~~~~~~i~~~~~~~~~~~~ 121 (197)
++|+|++.+++++ +++|++.. +. ..|...|.+++|+++.+
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-- 244 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLI-- 244 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEE--
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEE--
Confidence 9999999998765 79999221 11 02889999999998877
Q ss_pred EEeeCCCeEEEEEccCCcc---------cceeeeeeecCceecEEEEEEccC--CCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 122 ATCSSDQNIKVTRDVMGTR---------FDIETIGNFEDHYCTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~---------~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
++++.|+.|++||+++... .....+..+..|...|.+++|+|+ +++|++++.||.|++||+++++..
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 9999999999999976321 112456778889999999999999 999999999999999999987644
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-23 Score=158.13 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=130.8
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc-CCCcccc
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH-SFSRFNS 91 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (197)
.+.+...+.+|...|.+++|+|+ + ++|++|+.||.|++||+.+.+....+.. ..+...|.+++|+| ++..+++
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPT--HPTTVAVGSKGGDIILWDYDVQNKTSFIQG---MGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSS--CTTEEEEEEBTSCEEEEETTSTTCEEEECC---CSTTCBEEEEEEETTEEEEEEE
T ss_pred ccceEEeccCCCCCEEEEEECCC--CCCEEEEEcCCCeEEEEeCCCcccceeeec---CCcCCceeEEEeCCCCCCEEEE
Confidence 34556678899999999999998 7 8999999999999999987754432221 12367899999999 6677765
Q ss_pred e-----eEEEE-----eeEec--ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 92 I-----SIMYE-----AHSIN--AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 92 ~-----~~~~~-----~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+ +++|+ +..+. ..|...|.+++|+++.-.|++++.|+.|++||++ ...+..+.+|...|.++
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~------~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD------GHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT------SCEEEEEECSSSCEEEE
T ss_pred EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC------CCEEEEeccCCCcEEEE
Confidence 5 79999 33333 1345789999999444444999999999999985 46777888999999999
Q ss_pred EEccCCC-EEEEEeCCCcEEEEEcCCC
Q psy13207 160 SWNITGT-IVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 160 ~~~p~~~-~l~~~~~dg~i~iw~~~~~ 185 (197)
+|+|+++ +|++++.|+.|++||+++.
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 9999998 9999999999999999873
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-24 Score=160.11 Aligned_cols=174 Identities=13% Similarity=0.222 Sum_probs=133.2
Q ss_pred cccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.+++|++. ..+.+|...|.+++|+|+ +.+|++|+.||.|++||+.+.+....+. .+...+.+
T Consensus 192 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~v~~ 264 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWDARSSIPKFTKT-----NHNAAVKA 264 (401)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCSSEEEEEC-----CCSSCCCE
T ss_pred EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEccCCCCCccEEec-----CCcceEEE
Confidence 4567889999865 357789999999999998 9999999999999999998865432221 23678999
Q ss_pred EEEccCCCcccc--------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEE--eeCCCeEEEEEccCCcccce
Q psy13207 80 LTWNHSFSRFNS--------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMAT--CSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 80 ~~~~~~~~~~~~--------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s--~~~d~~i~~~d~~~~~~~~~ 143 (197)
++|+|++..++. .+++|| +..+. +...+.+++|+++.-.+++ |+.|+.|++||+++. ..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~---~~ 339 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS---GL 339 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT---EE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc---cc
Confidence 999998876533 279999 33443 6678999999944333366 558999999999762 13
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.....+.+|...|.+++|+|++++|++++.||.|++|++.+++.....
T Consensus 340 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 340 TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 344457789999999999999999999999999999999987765543
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-24 Score=159.22 Aligned_cols=177 Identities=19% Similarity=0.220 Sum_probs=139.7
Q ss_pred cccccccceeeee----------eeecCC-----CcceeEEEEC----CCCCCcE-EEEEeCCCcEEEEEcCC------c
Q psy13207 6 LQSEKCLNQWTRR----------SNLVDS-----RTSVTDVKFG----PKQLGLV-LATCAADGLVRIYEAPD------V 59 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------~~~~~h-----~~~v~~~~~~----~~~~~~~-l~s~~~dg~v~iw~~~~------~ 59 (197)
+..++.+++|++. ..+..| ...|.+++|+ |+ +.. |++++.||.|++||+.+ .
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL--LSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC--CceEEEEEeCCCcEEEEeCCcccccccc
Confidence 3567899999864 345677 5899999999 98 889 99999999999999988 5
Q ss_pred ccccceecccee--------ccCCCeeeEEEccCCCcccce-----eEEEE------eeEeccc---C---CCceeEEEE
Q psy13207 60 MNLSQWCLQHEV--------ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAE---H---KDLIHDVAY 114 (197)
Q Consensus 60 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~---~---~~~i~~~~~ 114 (197)
+.+. +.....+ .+...+.+++|+|++ .++++ +++|+ +..+. . | ...|.+++|
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLN-WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE-SQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTC-CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE-CCC---CCCCCEEEEEE
T ss_pred ceee-ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe-ccccccccCCccceEEE
Confidence 4443 1111122 136789999999999 77655 89999 55566 6 8 899999999
Q ss_pred cCCCeEEEEeeCC---CeEEEEEccCCcccceeeeeeecC-------------ceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 115 DYYGLRMATCSSD---QNIKVTRDVMGTRFDIETIGNFED-------------HYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 115 ~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
+++.-+|++++.| +.|++||+++ .+.+..+.+ |...|.+++|+|++++|++++.||.|+
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEF-----GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTT-----CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCCEEEEEecCCCCceEEEEECCC-----CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9444444999999 9999999976 567777777 999999999999999999999999999
Q ss_pred EEEcCCCcchhhhh
Q psy13207 179 LWKLKKKRKKKKEE 192 (197)
Q Consensus 179 iw~~~~~~~~~~~~ 192 (197)
+||+++.+....+.
T Consensus 317 iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 317 FWDVKTKERITTLN 330 (397)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEEcCCCceeEEEe
Confidence 99999887666555
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-24 Score=178.97 Aligned_cols=156 Identities=20% Similarity=0.297 Sum_probs=136.5
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
.+.+|.+.|++++|+|+ +++|++|+.||+|++||+.+++.+..+. .+...|.+++|+|++++++++ ++
T Consensus 610 ~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQD--GQRIASCGADKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVK 682 (1249)
T ss_dssp EECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEecccccEEEEEECCC--CCEEEEEeCCCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEE
Confidence 46799999999999999 9999999999999999999876543332 236789999999999998776 89
Q ss_pred EEE------eeEecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 95 MYE------AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 95 ~~~------~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
+|| +..+. +|...|.+++|++ +..++++|+.|+.|++||+++ ...+..+.+|...|.+++|+|+++
T Consensus 683 vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 683 IWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-----KECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp EEETTTCCEEEEEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----SSEEEEECCCSSCEEEEEECSSTT
T ss_pred EEECCCCceEEEEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----cchhheecCCCCCEEEEEEecCCC
Confidence 999 66777 8999999999984 655669999999999999987 677888889999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcch
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+|++++.||+|++||++++...
T Consensus 757 ~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 757 LLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp EEEEEESSSEEEEEEGGGTEEE
T ss_pred EEEEEECCCeEEEEeCCCCccc
Confidence 9999999999999999876543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-23 Score=152.56 Aligned_cols=162 Identities=12% Similarity=0.158 Sum_probs=134.5
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.+++|++. ..+.+|...|.+++|+|+ +++|++++.||.|++||+++++.+..+ .....+.+++
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~------~~~~~v~~~~ 231 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGRQLQQH------DFTSQIFSLG 231 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEE------ECSSCEEEEE
T ss_pred eCCCcEEEEeCCCCceeeeeecccCceEEEEECCC--CCEEEEEecCCcEEEEECCCCceEeee------cCCCceEEEE
Confidence 467888999753 457889999999999998 999999999999999999887654332 3366899999
Q ss_pred EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
|+|+++.++++ +++|+ ...+. .|...+.+++|+++.-+|++++.|+.|++||+++ .+.+.. ..
T Consensus 232 ~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-----~~~~~~-~~ 304 (337)
T 1gxr_A 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY-----GASIFQ-SK 304 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSSCEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEE-EE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCCeEEEc-CCccceeEEEECCCCCEEEEecCCCcEEEEECCC-----CeEEEE-ec
Confidence 99999998765 79999 44566 7999999999995444449999999999999976 333333 34
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
|...|.+++|+|++++|++++.||.|++|++.
T Consensus 305 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 305 ESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 77899999999999999999999999999974
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=165.17 Aligned_cols=179 Identities=12% Similarity=0.155 Sum_probs=135.2
Q ss_pred cccccccceeeeee---------eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC---Ccccccceec--cce
Q psy13207 6 LQSEKCLNQWTRRS---------NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP---DVMNLSQWCL--QHE 70 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~---~~~~~~~~~~--~~~ 70 (197)
+..|+++++|++.. .+. +|..+|.+++|+|+ +.+|++|+.||+|++||+. +++....... ...
T Consensus 82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 82 GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPN--FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE
Confidence 46789999998754 222 68999999999998 9999999999999999995 3332221110 011
Q ss_pred ec-----cCCCeeeEE--EccCCCcccce-----eEEEE------eeEeccc--CCCceeEEEEcCCCeEEEEeeCCCeE
Q psy13207 71 VA-----CPTLASCLT--WNHSFSRFNSI-----SIMYE------AHSINAE--HKDLIHDVAYDYYGLRMATCSSDQNI 130 (197)
Q Consensus 71 ~~-----~~~~~~~~~--~~~~~~~~~~~-----~~~~~------~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i 130 (197)
+. ....+.++. +++++..++++ +++|| +..+. . |...|.+++|+++.-+|++|+.|+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~dg~i 238 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE-NSPRHGAVSSICIDEECCVLILGTTRGII 238 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE-CCGGGCCEEEEEECTTSCEEEEEETTSCE
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc-cCCCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 11 244566666 55778887765 89999 55555 5 88999999999554444999999999
Q ss_pred EEEEccCCcccceeeeeeec-CceecEEEEEEcc----CCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 131 KVTRDVMGTRFDIETIGNFE-DHYCTVWRVSWNI----TGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
++||+++ ..++..+. .|...|.+++|+| ++.+|++++.||.|++||+++++....+.
T Consensus 239 ~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 239 DIWDIRF-----NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEEETTT-----TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCC-----ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 9999986 56677665 7788999996654 67899999999999999999876554443
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-23 Score=153.82 Aligned_cols=173 Identities=13% Similarity=0.162 Sum_probs=133.4
Q ss_pred cccccccceeeeee------eecCCCc----ceeEEE----ECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 6 LQSEKCLNQWTRRS------NLVDSRT----SVTDVK----FGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------~~~~h~~----~v~~~~----~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
+..++.+++|++.. .+..|.+ .|.++. |+|+ +.+|++++.||.|++||+++.+... ..
T Consensus 135 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~------~~ 206 (357)
T 3i2n_A 135 GSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE--ERVVCAGYDNGDIKLFDLRNMALRW------ET 206 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C--CCEEEEEETTSEEEEEETTTTEEEE------EE
T ss_pred EeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC--CCEEEEEccCCeEEEEECccCceee------ec
Confidence 35678999998643 3444443 899998 6788 9999999999999999998875421 22
Q ss_pred ccCCCeeeEEEcc---CCCcccce-----eEEEEee-----------EecccCCCceeEEEEcCCCe-EEEEeeCCCeEE
Q psy13207 72 ACPTLASCLTWNH---SFSRFNSI-----SIMYEAH-----------SINAEHKDLIHDVAYDYYGL-RMATCSSDQNIK 131 (197)
Q Consensus 72 ~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~ 131 (197)
.....+.+++|+| ++..++++ +++|++. .+. .|...|.+++|+++.- +|++++.|+.|+
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK-AHKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC-CCcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 3367899999999 88887765 7999922 223 7899999999996543 459999999999
Q ss_pred EEEccCCccc--------------ceeeeeeecCceecEEEEEEccCCCEEE-EEeCCCcEEEEEcCCCcc
Q psy13207 132 VTRDVMGTRF--------------DIETIGNFEDHYCTVWRVSWNITGTIVA-SSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 132 ~~d~~~~~~~--------------~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~~~dg~i~iw~~~~~~~ 187 (197)
+||++..... ....+..+.+|...|.+++|+|++++|+ +++.||.|++||+.+...
T Consensus 286 iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 286 LWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 9999753211 1246777889999999999999999998 899999999999987543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-23 Score=151.01 Aligned_cols=168 Identities=16% Similarity=0.220 Sum_probs=134.5
Q ss_pred cccccccceeeee---eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRR---SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~---~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..++.+++|+.. ..+..|..+|.++.|.| + +..|++++.||.|++||.... ...+. ......+.+++
T Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~--~~~~~----~~~~~~i~~~~ 191 (313)
T 3odt_A 120 GSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFS--ENKFLTASADKTIKLWQNDKV--IKTFS----GIHNDVVRHLA 191 (313)
T ss_dssp EETTSEEEEEETTEEEEEEECCSSCEEEEEEEETT--TTEEEEEETTSCEEEEETTEE--EEEEC----SSCSSCEEEEE
T ss_pred EeCCCCEEEEcCCcEEEecccCCCceeEEEEccCC--CCEEEEEECCCCEEEEecCce--EEEEe----ccCcccEEEEE
Confidence 3567888999732 35778999999999998 6 889999999999999994322 11111 11367899999
Q ss_pred EccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 82 WNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
|+|++. ++++ +++|+ +..+. .|...|.+++|+++. .|++++.|+.|++||+++ .+.+..+.
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~-----~~~~~~~~ 263 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN-----GSLKQVIT 263 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT-----CCEEEEEE
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCC-CEEEEecCCEEEEEECCC-----CceeEEEe
Confidence 999999 5443 89999 56666 899999999999543 249999999999999977 67778888
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.|...|.+++|+|+++ +++++.||.|++||+++++....
T Consensus 264 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 264 LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 8999999999999998 66789999999999988665443
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-23 Score=168.57 Aligned_cols=175 Identities=18% Similarity=0.227 Sum_probs=140.8
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..++.+++|++. ..+.+|.++|.+++|+|+.++++|++|+.||+|++||+.+++.. ....+. +...+
T Consensus 27 g~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~----~~~~~~~h~~~V 102 (753)
T 3jro_A 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS----QIAVHAVHSASV 102 (753)
T ss_dssp EETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE----EEEEECCCSSCE
T ss_pred EECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc----ccccccCCCCCe
Confidence 3568999999875 25789999999999997644789999999999999999876421 112222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEE--------eeEecccCCCceeEEEEcC-------------CCeEEEEeeCCCe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDY-------------YGLRMATCSSDQN 129 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~-------------~~~~~~s~~~d~~ 129 (197)
.+++|+|+ +..++++ +++|+ ...+. +|...|.+++|++ +.-.+++|+.||.
T Consensus 103 ~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~ 181 (753)
T 3jro_A 103 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 181 (753)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEEECCCC---------CGGGCCEEEEETTSC
T ss_pred EEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCe
Confidence 99999999 8887765 79999 23344 7889999999986 2334499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccC---CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||+++.... ......+.+|...|.+++|+|+ +++|++++.||.|++||++++.
T Consensus 182 I~iwd~~~~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 182 VKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred EEEEeccCCccc-ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 999999863211 3566778899999999999999 9999999999999999998753
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-23 Score=159.11 Aligned_cols=173 Identities=17% Similarity=0.297 Sum_probs=133.9
Q ss_pred ccccccceeeeee---------------eecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccc-eeccc
Q psy13207 7 QSEKCLNQWTRRS---------------NLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQ-WCLQH 69 (197)
Q Consensus 7 ~~~~~~~~w~~~~---------------~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~-~~~~~ 69 (197)
..++.+++|++.. .+.+|...|.+++|+|+ +. +|++|+.||.|++|++........ .....
T Consensus 148 ~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 225 (430)
T 2xyi_A 148 TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSASDDHTICLWDINATPKEHRVIDAKN 225 (430)
T ss_dssp CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEECTTSCEEEEETTSCCBGGGEEECSE
T ss_pred CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEeCCCeEEEEeCCCCCCCCceeccce
Confidence 4577888887653 36789999999999998 76 999999999999999987432211 11122
Q ss_pred ee-ccCCCeeeEEEccC-CCcccce-----eEEEE---------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEE
Q psy13207 70 EV-ACPTLASCLTWNHS-FSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKV 132 (197)
Q Consensus 70 ~~-~~~~~~~~~~~~~~-~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~ 132 (197)
.+ .+...+.+++|+|+ +..++++ +++|| +..+. .|...|++++|+++. .+|++|+.|+.|++
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~dg~v~v 304 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 304 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 22 23678999999995 5555544 89999 23445 789999999999322 12389999999999
Q ss_pred EEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
||+++. ...+..+.+|...|.+++|+|+++ +|++++.||.|++||++..+
T Consensus 305 wd~~~~----~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 305 WDLRNL----KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp EETTCT----TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred EeCCCC----CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999852 345677788999999999999985 79999999999999998743
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=162.48 Aligned_cols=174 Identities=13% Similarity=0.145 Sum_probs=133.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV--------- 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~--------- 71 (197)
+..|+.+++|++. ..+.+|...|.+++|+|+ +.+|++++.||+|++||+++++.+..+......
T Consensus 157 ~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 4567899999864 357899999999999998 999999999999999999988665444321100
Q ss_pred ----------ccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCe-EEEEeeCCCe
Q psy13207 72 ----------ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQN 129 (197)
Q Consensus 72 ----------~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~ 129 (197)
.....+.+++|+|++++++++ +++|| +..+...|...|.+++|+++.- +|++++.|+.
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 013556677788999888765 89999 3344436889999999994422 3399999999
Q ss_pred EEEEEccCCcccceeeeeeecC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||+++. ..++..+.. |...|.++.+ |++++|++++.||.|++|++....
T Consensus 315 i~vwd~~~~----~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 315 LAQWDLRSP----ECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp EEEEETTCT----TSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTT
T ss_pred EEEEEcCCC----cCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCC
Confidence 999999863 123455555 6677888855 578899999999999999998743
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=155.29 Aligned_cols=178 Identities=14% Similarity=0.155 Sum_probs=132.6
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..++.+++|++. ..+.+|..+|.+++|+|+ +++|++++.||.|++||+.+.+... ...+...+.
T Consensus 60 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~------~~~~~~~v~ 131 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD--GSKVFTASCDKTAKMWDLSSNQAIQ------IAQHDAPVK 131 (368)
T ss_dssp EETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEE------EEECSSCEE
T ss_pred ECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC--CCEEEEEcCCCcEEEEEcCCCCcee------eccccCceE
Confidence 3568899999876 357789999999999998 9999999999999999998875432 223477899
Q ss_pred eEEE--ccCCCcccce-----eEEEE------eeEec----------------------------------------ccC
Q psy13207 79 CLTW--NHSFSRFNSI-----SIMYE------AHSIN----------------------------------------AEH 105 (197)
Q Consensus 79 ~~~~--~~~~~~~~~~-----~~~~~------~~~~~----------------------------------------~~~ 105 (197)
+++| +|++.+++++ +++|| +..+. ..+
T Consensus 132 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 211 (368)
T 3mmy_A 132 TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPL 211 (368)
T ss_dssp EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSC
T ss_pred EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccc
Confidence 9999 8888877665 78888 12221 011
Q ss_pred CCceeEEEEc--CCC--eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee------------cEEEEEEccCCCEEE
Q psy13207 106 KDLIHDVAYD--YYG--LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC------------TVWRVSWNITGTIVA 169 (197)
Q Consensus 106 ~~~i~~~~~~--~~~--~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~------------~v~~~~~~p~~~~l~ 169 (197)
...+.++++. +.. -.+++++.|+.|++||++.... ...+..+.+|.. .|.+++|+|++++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 289 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP--AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA 289 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH--HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEE
T ss_pred cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc--cccceeeeeeecccccccccccccceEEEEEecCCCEEE
Confidence 1223334333 222 1139999999999999976311 144556666765 799999999999999
Q ss_pred EEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+++.||.|++||+++++....+..
T Consensus 290 s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 290 TVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp EEETTSCEEEEETTTTEEEEECCC
T ss_pred EEccCCeEEEEECCCCcEEEEecC
Confidence 999999999999998776665543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-23 Score=157.96 Aligned_cols=174 Identities=18% Similarity=0.292 Sum_probs=136.9
Q ss_pred cccccccceeeeee------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-c
Q psy13207 6 LQSEKCLNQWTRRS------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-A 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~ 72 (197)
+..++.+++|++.. .+.+|...|.+++|+|.+ +.+|++++.||.|++||+++...... ...+ .
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~~---~~~~~~ 275 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSKP---SHTVDA 275 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSSC---SEEEEC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCcc---eeEeec
Confidence 45678899998653 356899999999999942 78999999999999999987632111 1122 2
Q ss_pred cCCCeeeEEEccCCCc-ccce-----eEEEE-------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCC
Q psy13207 73 CPTLASCLTWNHSFSR-FNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~-~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~ 138 (197)
+...+.+++|+|++.. ++++ +++|| +..+. .|...|.+++|+++. .+|++++.|+.|++||++..
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 3678999999999985 5444 89999 55666 799999999999433 23499999999999999752
Q ss_pred cccc---------eeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCC
Q psy13207 139 TRFD---------IETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 139 ~~~~---------~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~ 184 (197)
.... ...+..+.+|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 1110 256777888999999999999998 999999999999999975
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-24 Score=172.30 Aligned_cols=162 Identities=17% Similarity=0.145 Sum_probs=137.0
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
++...+.+|.+.|.+++|+|+ +.+|++++.||.|++||+.+++.+..+. .+...+.+++|+|++++++++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~--~~~la~~~~~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPT--EPWVLTTLYSGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred ccceeeecCCCceEEEEECCC--CCEEEEEeCCCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCC
Confidence 455678899999999999999 9999999999999999998876543332 236789999999999998766
Q ss_pred --eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI- 163 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p- 163 (197)
+++|+ +..+. +|...|.+++|+++.-+|++++.|+.|++||+++. ......+.+|...|.+++|+|
T Consensus 77 g~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----WALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT----SEEEEEEECCSSCEEEEEEETT
T ss_pred CeEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC----ceEEEEEcCCCCcEEEEEEEcC
Confidence 79999 56666 89999999999955444499999999999999752 356677888999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
++++|++++.||+|++||+.......
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCCEEEEEeCCCeEEEEECCCCccee
Confidence 89999999999999999998765443
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=161.25 Aligned_cols=182 Identities=19% Similarity=0.281 Sum_probs=140.0
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc----ceeccceec
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS----QWCLQHEVA 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~----~~~~~~~~~ 72 (197)
+..++.+++|++.. .+.+|...|.+++|+|++ +.+|++++.||.|++||+.+.+... .+.......
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 34678899997654 467899999999999963 6789999999999999998775110 111111122
Q ss_pred cCCCeeeEEEccC-CCcccce-----eEEEE------eeEecccC------CCceeEEEEcCCC-eEEEEeeCCC---eE
Q psy13207 73 CPTLASCLTWNHS-FSRFNSI-----SIMYE------AHSINAEH------KDLIHDVAYDYYG-LRMATCSSDQ---NI 130 (197)
Q Consensus 73 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~------~~~~~~~~------~~~i~~~~~~~~~-~~~~s~~~d~---~i 130 (197)
+...+.+++|+|+ +..++++ +++|| +..+. .+ ...+.+++|+++. .++++++.|+ .|
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS-YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC-CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe-ccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 3678999999999 5666554 89999 44444 44 7889999999442 2339999998 99
Q ss_pred EEEEccCCcccceeeeeeec-CceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 131 KVTRDVMGTRFDIETIGNFE-DHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
++||+++. ...+..+. +|...|.+++|+| ++++|++++.||.|++||+++++....+..
T Consensus 243 ~~~d~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 243 LIWDLRNA----NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp CEEETTST----TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred EEEeCCCC----CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 99999862 24556677 8999999999999 899999999999999999998776655543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-23 Score=157.72 Aligned_cols=168 Identities=11% Similarity=0.129 Sum_probs=135.7
Q ss_pred ccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.+++|++.. .+.+|..+|.+++|+|+ +++|++++.||.|++||+.+.+....+. .+...+.+++
T Consensus 224 ~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~i~~~~ 296 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT--NKLLLSASDDGTLRIWHGGNGNSQNCFY-----GHSQSIVSAS 296 (425)
T ss_dssp CGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT--TTEEEEEETTSCEEEECSSSBSCSEEEC-----CCSSCEEEEE
T ss_pred cCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCccceEec-----CCCccEEEEE
Confidence 4567888887653 57789999999999998 9999999999999999998876543322 1367899999
Q ss_pred EccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc-----------
Q psy13207 82 WNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT----------- 139 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~----------- 139 (197)
|+|++ .++++ +++|+ +..+. .|...+.+++|+++.-+|++++.|+.|++||+++..
T Consensus 297 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 374 (425)
T 1r5m_A 297 WVGDD-KVISCSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRD 374 (425)
T ss_dssp EETTT-EEEEEETTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----------
T ss_pred ECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccc
Confidence 99999 65544 89999 55566 789999999999554444999999999999997521
Q ss_pred ----ccceeeeeeecCcee--cEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 140 ----RFDIETIGNFEDHYC--TVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 140 ----~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
......+..+.+|.. .|.+++|+|++++|++++.||.|++|+++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 375 GILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ----CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 000116788888866 99999999999999999999999999985
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-24 Score=160.48 Aligned_cols=177 Identities=10% Similarity=0.146 Sum_probs=138.5
Q ss_pred cccccccceeeeeee--------------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 6 LQSEKCLNQWTRRSN--------------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~--------------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
+..++.+++|++... +.+|...|.+++|+|++ +.+|++++.||.|++||+++.+.+..+......
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL-AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC-TTEEEEESSSSCEEEEETTTTEEEEEECCCCCS
T ss_pred EcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCCcceEEeccccc
Confidence 356788999986431 25689999999999973 578999999999999999987655443322111
Q ss_pred cc-CCCeeeEEEccCCC-cccc--------eeEEEEeeE------ecc-cCCCceeEEEEcC-CCeEEEEeeCCCeEEEE
Q psy13207 72 AC-PTLASCLTWNHSFS-RFNS--------ISIMYEAHS------INA-EHKDLIHDVAYDY-YGLRMATCSSDQNIKVT 133 (197)
Q Consensus 72 ~~-~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~------~~~-~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~ 133 (197)
.. ...+.+++|+|++. .+++ .+++||+.. ... +|...|.+++|++ +.-+|++++.|+.|++|
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w 290 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW 290 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe
Confidence 11 56799999999985 4433 478999222 112 5888999999984 44444999999999999
Q ss_pred EccCCcccceeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcch
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
|+++ .+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+......
T Consensus 291 d~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 291 NPES-----AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp CSSS-----CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred eCCC-----CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 9977 67788888999999999999998 89999999999999999876643
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=176.62 Aligned_cols=164 Identities=12% Similarity=0.129 Sum_probs=122.9
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee------ccCCCeeeEEEccCCCcccce--
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV------ACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
+.+|...+..++|+|+ +++|+||+.|++|++||+.++.......+...+ .+...|.+++|+|++++|+++
T Consensus 431 l~G~~~~v~sv~~spd--g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEY--GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp CCCSBCCCCCCCCCSE--EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred ccCCcCCCCccccccc--CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 4556666667777898 999999999999999999887421100000011 235789999999999999877
Q ss_pred ---eEEEEee---------------------------------------------------EecccCCCceeEEEEcCCC
Q psy13207 93 ---SIMYEAH---------------------------------------------------SINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 93 ---~~~~~~~---------------------------------------------------~~~~~~~~~i~~~~~~~~~ 118 (197)
+++|++. .+. +|...|++++|+++.
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~h~~~V~svafSpdG 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-ANKGKTSAINNSNIG 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-CCSCSEEEEEECBTS
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-cCCCcEEEEEecCCc
Confidence 7999943 234 689999999999666
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeec-CceecEEEEEEc-----cCC---CEEEEEeCCCcEEEEEc---CCCc
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DHYCTVWRVSWN-----ITG---TIVASSGDDGCVRLWKL---KKKR 186 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-----p~~---~~l~~~~~dg~i~iw~~---~~~~ 186 (197)
+||+|+.|++|++||+++........+..+. +|...|++++|+ ||| ++|++|+.|++|++||+ .+++
T Consensus 588 -~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 588 -FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred -EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 6699999999999998762111000112344 899999999999 885 89999999999999999 5544
Q ss_pred ch
Q psy13207 187 KK 188 (197)
Q Consensus 187 ~~ 188 (197)
..
T Consensus 667 ~~ 668 (902)
T 2oaj_A 667 FD 668 (902)
T ss_dssp EE
T ss_pred EE
Confidence 33
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=160.57 Aligned_cols=158 Identities=12% Similarity=0.109 Sum_probs=128.3
Q ss_pred cCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcC--CcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAP--DVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+|.+.|.+++|+|+ +++| ++++.||.|++||+. +++.+..+.. ......+.+++|+|++.+++++ +
T Consensus 99 ~~~~~~v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSKNVLKLRKR---FCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp -CCCCCEEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE---EECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CccCCceEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCCceeeeeec---ccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 467778999999999 8885 899999999999998 6654433221 1225789999999999998876 6
Q ss_pred EEEE------ee----EecccCCCceeEEEEcCC---CeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecEEEE
Q psy13207 94 IMYE------AH----SINAEHKDLIHDVAYDYY---GLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRV 159 (197)
Q Consensus 94 ~~~~------~~----~~~~~~~~~i~~~~~~~~---~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~ 159 (197)
++|+ .. .+. +|...|.+++|+++ .-+|++++.|+.|++||+++ ...+.. +.+|...|.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-----CFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp EEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-----TTCEEEECCCCSSCEEEE
T ss_pred EEEecCCcccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-----CceeeeeecCCCCceEEE
Confidence 7787 21 445 78999999999977 55559999999999999976 444554 56899999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+|+ ++++|++++.|++|++||+++++....+
T Consensus 248 ~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 248 CCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp EEC-STTEEEEEESSSEEEEEETTTCCEEEEE
T ss_pred EEC-CCCEEEEEeCCCeEEEEECCCCcEeeee
Confidence 999 9999999999999999999988755444
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-22 Score=153.08 Aligned_cols=169 Identities=13% Similarity=0.193 Sum_probs=134.1
Q ss_pred ccccceeeee-----eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccce--------eccC
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--------VACP 74 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--------~~~~ 74 (197)
+..+++|+.. ..+.+|.++|.+++|+| + +++|++|+.||.|++||+.+......+..... ..+.
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVE--GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTT--CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCC--CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC
Confidence 4456677654 34778999999999999 8 99999999999999999998765544432111 0146
Q ss_pred CCeeeEEEcc-CCCcccce-----eEEEE------eeEecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEccCCc
Q psy13207 75 TLASCLTWNH-SFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
..|.+++|+| ++..++++ +++|+ +..+ .+...+.++.|++ +..++++++.|+.|++||+++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-- 175 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS-- 175 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS--
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC--
Confidence 7899999999 66666554 89999 2233 3677899999982 333449999999999999976
Q ss_pred ccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
...+..+.+|...|.+++|+|+++ +|++++.||.|++||+++..
T Consensus 176 ---~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 176 ---GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp ---SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred ---cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 566778889999999999999998 58999999999999998754
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=169.60 Aligned_cols=181 Identities=22% Similarity=0.311 Sum_probs=142.1
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|+.+++|++. ..+.+|..+|.+++|+|+..+..+++|+.||.|++||+.+......... ..+...+.
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~---~~~~~~v~ 149 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII---DAHAIGVN 149 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE---ECCSSCEE
T ss_pred EeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe---ecCCCceE
Confidence 4678999999865 3467899999999999963367899999999999999987744322211 12367899
Q ss_pred eEEEcc-------------CCCcccce-----eEEEE----------eeEecccCCCceeEEEEcCC---CeEEEEeeCC
Q psy13207 79 CLTWNH-------------SFSRFNSI-----SIMYE----------AHSINAEHKDLIHDVAYDYY---GLRMATCSSD 127 (197)
Q Consensus 79 ~~~~~~-------------~~~~~~~~-----~~~~~----------~~~~~~~~~~~i~~~~~~~~---~~~~~s~~~d 127 (197)
++.|+| ++..++++ +++|| ...+. +|...|.+++|+|+ .-.|++++.|
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 999999 47777665 79998 34555 79999999999976 5566999999
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
|.|++||+++..............|...|++++|+|+|+++++++.||.|++|+++..+.+..
T Consensus 229 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~ 291 (753)
T 3jro_A 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 291 (753)
T ss_dssp SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBC
T ss_pred CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCccc
Confidence 999999998632211223444556888999999999999999999999999999987655443
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-23 Score=152.47 Aligned_cols=169 Identities=12% Similarity=0.178 Sum_probs=136.1
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..++.+++|++.. .+..|...|.+++|+|+ +++|++++.|+.|++||+.......... .....+...+.
T Consensus 70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~~~~~i~ 146 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCK-HIKKPIRSTVL 146 (372)
T ss_dssp EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEE-EECTTCCSCEE
T ss_pred EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeee-eeecccCCCee
Confidence 35678999998753 24679999999999998 9999999999999999998765311111 00112267899
Q ss_pred eEEEccCCCcccce-----eEEEEe------------------------eEecccCCCceeEEEEcCCCeEEEEeeCCCe
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYEA------------------------HSINAEHKDLIHDVAYDYYGLRMATCSSDQN 129 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~------------------------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~ 129 (197)
+++|+|++.+++++ +++||+ ..+. .|...|.+++|+++.-+|++++.|+.
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCE
Confidence 99999999988765 799983 2334 68889999999944434499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|++||+++ .+.+..+..|...|.+++|+|++++++++ .|+.|++|+++.
T Consensus 226 i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 226 VCLADADK-----KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEGGG-----TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEECCC-----CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999976 56778888899999999999999988887 899999999987
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-23 Score=153.43 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=132.7
Q ss_pred cccccccceeeee------eeecCCCcceeEEEE------CCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceec
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKF------GPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVA 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~------~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~ 72 (197)
+..++.+++|++. ..+.+|...|.++.| +|+ +++|++++.||.|++||+.+.+ ....+... .-.
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~ 162 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEG--APEIVTGSRDGTVKVWDPRQKDDPVANMEPV-QGE 162 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-C--CCEEEEEETTSCEEEECTTSCSSCSEEECCC-TTS
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCC--ccEEEEEeCCCeEEEEeCCCCCCcceecccc-CCC
Confidence 4568899999754 357889999999965 677 8999999999999999998875 22222211 001
Q ss_pred cCCCeeeEE----EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEc
Q psy13207 73 CPTLASCLT----WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 73 ~~~~~~~~~----~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~ 135 (197)
....+.++. |+|++.+++++ +++|| ..... .|...|.+++|++ +.-.|++++.|+.|++||+
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET-NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 134788888 78899888765 79999 33334 6889999999996 5555599999999999999
Q ss_pred cCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
++...........+.+|...|.+++|+|+++ +|++++.||.|++||++...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 7622111112223448999999999999998 89999999999999998654
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=162.30 Aligned_cols=172 Identities=8% Similarity=0.035 Sum_probs=117.7
Q ss_pred cccccccceeeeee----------eecCCCcceeEEEECC--------CCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 6 LQSEKCLNQWTRRS----------NLVDSRTSVTDVKFGP--------KQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----------~~~~h~~~v~~~~~~~--------~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
+..|+++++|+... .+.+|.+.|++++|+| + +++||||+.|++|+|||+.+.....
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d--~~~las~s~D~tv~~Wd~~~~~~~~---- 180 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLA--EQVIASVGDDCTLIIWRLTDEGPIL---- 180 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE--EEEEEEEETTSEEEEEEEETTEEEE----
T ss_pred EeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCC--CCEEEEEECCCeEEEEECCCCceee----
Confidence 45789999998642 3679999999999998 6 8899999999999999998765332
Q ss_pred cceeccCCCeeeEEEccCCC-cccce-----eEEEEee-------------------------------EecccCCCcee
Q psy13207 68 QHEVACPTLASCLTWNHSFS-RFNSI-----SIMYEAH-------------------------------SINAEHKDLIH 110 (197)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~-------------------------------~~~~~~~~~i~ 110 (197)
....+...+.+++|+|++. +++++ +++||+. ... +|...+.
T Consensus 181 -~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~v~ 258 (393)
T 4gq1_A 181 -AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS-GIASSLA 258 (393)
T ss_dssp -EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-------CCSSSCS
T ss_pred -eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc-cccccce
Confidence 2233467899999999885 56554 8999911 112 5777889
Q ss_pred EEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE------------------EEEcc--CCCEEE
Q psy13207 111 DVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR------------------VSWNI--TGTIVA 169 (197)
Q Consensus 111 ~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~------------------~~~~p--~~~~l~ 169 (197)
++.|. ++.-++++++.|+.+++||+.. ......+..|...+.. ..|+| ++.+++
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFA-----NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC------------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECcc-----CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 99997 4444459999999999999975 2223333333333332 23333 344677
Q ss_pred EEeCCCcEEEEEcCCCcchhh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+|+.||+|++||+.+++....
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEE
T ss_pred EECCCCEEEEEECCCCcEEEE
Confidence 888999999999988765543
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-23 Score=162.54 Aligned_cols=175 Identities=17% Similarity=0.151 Sum_probs=140.9
Q ss_pred ccccceeeee---------eeecCCCcc-eeEEEECC--CCCCcEEEEEeCCCcEEEEEcCCccccc--ceeccceec-c
Q psy13207 9 EKCLNQWTRR---------SNLVDSRTS-VTDVKFGP--KQLGLVLATCAADGLVRIYEAPDVMNLS--QWCLQHEVA-C 73 (197)
Q Consensus 9 ~~~~~~w~~~---------~~~~~h~~~-v~~~~~~~--~~~~~~l~s~~~dg~v~iw~~~~~~~~~--~~~~~~~~~-~ 73 (197)
++.+++|++. ..+.+|... |.+++|+| + +++|++++.||+|++||+.+++... .......+. +
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 115 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG--SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 115 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTT--CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCC--CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcc
Confidence 5677888754 347789999 99999999 8 9999999999999999997541111 011122222 3
Q ss_pred CCCeeeEEEccCCCcccce---------eEEEE----eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCc
Q psy13207 74 PTLASCLTWNHSFSRFNSI---------SIMYE----AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~ 139 (197)
...+.+++|+|++++++++ +.+|+ +..+. +|...|.+++|+++.- ++++++.|+.|++||.++
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-- 192 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-- 192 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT--
T ss_pred cccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeee-cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC--
Confidence 6789999999999988643 56666 66667 8999999999994431 349999999999999976
Q ss_pred ccceeeeeeecCcee---cEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 140 RFDIETIGNFEDHYC---TVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~---~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.+.+..+.+|.. .|.+++|+|+ +++|++++.||.|++||+++++....+
T Consensus 193 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 193 ---FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp ---BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred ---cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 677888899999 9999999999 999999999999999999987766555
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=157.74 Aligned_cols=151 Identities=13% Similarity=0.147 Sum_probs=120.3
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc--ccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV--MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
..+.++|++++|+|+ +++|++|+.|+.|++||+.++ +....+. .+...|.+++|+|++++++++ ++
T Consensus 8 ~~~~~~v~~~~~s~~--g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQ--RTEFVTTTATNQVELYEQDGNGWKHARTFS-----DHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp EECSSCCSCCEECSS--SSEEECCCSSSCBCEEEEETTEEEECCCBC-----CCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred ecCCCcEEEEEECCC--CCEEEEecCCCEEEEEEccCCceEEEEEEe-----cCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 346779999999998 999999999999999999876 3322221 236789999999999998776 79
Q ss_pred EEEe---------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-ceecEEEEEEc
Q psy13207 95 MYEA---------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWN 162 (197)
Q Consensus 95 ~~~~---------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~ 162 (197)
+|++ ..+. .|...|.+++|+ ++.+ ++++.|+.|++||+++... ......+.. |...|.+++|+
T Consensus 81 vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l--~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~h~~~v~~~~~~ 155 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKF--AVGSGARVISVCYFEQEND--WWVSKHLKRPLRSTILSLDWH 155 (377)
T ss_dssp EC------CCCCEEECC-CCSSCEEEEECCTTSSCC--EEEESSSCEEECCC-------CCCCEEECSSCCSCEEEEEEC
T ss_pred EEEcCCCCceeeeeEec-ccCCceEEEEECCCCCEE--EEEecCCeEEEEEECCccc--ceeeeEeecccCCCeEEEEEc
Confidence 9992 2234 789999999999 5566 9999999999999976211 113566666 99999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCC
Q psy13207 163 ITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|++++|++++.|+.|++||++.
T Consensus 156 ~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 156 PNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp TTSSEEEEEESSSCEEEEEECC
T ss_pred CCCCEEEEEeCCCEEEEEEEEe
Confidence 9999999999999999999863
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=171.96 Aligned_cols=167 Identities=11% Similarity=0.088 Sum_probs=133.9
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..|+++++|+... ....|..+|.+++|+| +++|++++.|++|++||+.+++.+..+ .....|.+++
T Consensus 35 gs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp---g~~L~S~s~D~~v~lWd~~~~~~~~~~------~~~~~V~~v~ 105 (902)
T 2oaj_A 35 ATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK---GIYLVVINAKDTVYVLSLYSQKVLTTV------FVPGKITSID 105 (902)
T ss_dssp EETTSEEEEECSTTCEEEEECSSCCCEEEEEEET---TTEEEEEETTCEEEEEETTTCSEEEEE------ECSSCEEEEE
T ss_pred EeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC---CCEEEEEECcCeEEEEECCCCcEEEEE------cCCCCEEEEE
Confidence 46788999997542 1235788999999999 448999999999999999987655433 2356899999
Q ss_pred EccCCCcccce-----eEEEEe-----------------eEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCC
Q psy13207 82 WNHSFSRFNSI-----SIMYEA-----------------HSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~-----------------~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~ 138 (197)
|+|++++++++ +++||+ ..+. +|...|.+++|+|+ .-.+++|+.|+.| +||+++
T Consensus 106 ~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~- 182 (902)
T 2oaj_A 106 TDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA-ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE- 182 (902)
T ss_dssp CCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS-SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc-cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-
Confidence 99999998876 899991 1224 68899999999963 2234899999999 999986
Q ss_pred cccceeeeeeecCc------------------eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 139 TRFDIETIGNFEDH------------------YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 139 ~~~~~~~~~~~~~h------------------~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+.+..+..| ...|.+++|+|+|++|++++.||+|++||+++++.+
T Consensus 183 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 183 ----NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp ----TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred ----CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 4555555444 578999999999999999999999999999887654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-22 Score=152.56 Aligned_cols=172 Identities=13% Similarity=0.129 Sum_probs=133.7
Q ss_pred cccccccceeeeee------------eecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceec
Q psy13207 6 LQSEKCLNQWTRRS------------NLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------------~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 72 (197)
+..|+.+++|++.. .+.+|...|.+++|+|+ + .+|++++.||.|++||+.+++.+..+.. ..
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~ 174 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPT--AQNVLLSAGCDNVILVWDVGTGAAVLTLGP---DV 174 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSS--BTTEEEEEETTSCEEEEETTTTEEEEEECT---TT
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcC--CCCEEEEEcCCCEEEEEECCCCCccEEEec---CC
Confidence 45688999998642 46789999999999998 7 6999999999999999998765433210 12
Q ss_pred cCCCeeeEEEccCCCcccce-----eEEEE------eeEe-cccCCCc-eeEEEEcCCCeEEEEe---eCCCeEEEEEcc
Q psy13207 73 CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSI-NAEHKDL-IHDVAYDYYGLRMATC---SSDQNIKVTRDV 136 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~-~~~~~~~-i~~~~~~~~~~~~~s~---~~d~~i~~~d~~ 136 (197)
+...+.+++|+|++..++++ +++|| +..+ . .|... +.+++|+++.-+|++| +.|+.|++||++
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR-PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc-CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 36789999999999998766 89999 4455 4 67665 8999999655555888 789999999997
Q ss_pred CCcccceeeeee-ecCceecEEEEEEccCCCEEEE-EeCCCcEEEEEcCCCcc
Q psy13207 137 MGTRFDIETIGN-FEDHYCTVWRVSWNITGTIVAS-SGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 137 ~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~l~~-~~~dg~i~iw~~~~~~~ 187 (197)
+.. ..+.. ...|...+.+++|+|++++|++ ++.||.|++||+.+.+.
T Consensus 254 ~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 254 HLE----EPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp BCS----SCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred ccc----CCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 631 11222 2246678999999999999975 55799999999988763
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-23 Score=153.62 Aligned_cols=173 Identities=10% Similarity=-0.019 Sum_probs=128.7
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc---ee--ccceeccCC
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ---WC--LQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~---~~--~~~~~~~~~ 75 (197)
+..|+++++|++.. .+. ...|.++.|+|. +++++.|++|++|+......+.. .. ......+..
T Consensus 54 g~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T 3lrv_A 54 RCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN 126 (343)
T ss_dssp EEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS
T ss_pred ECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC
Confidence 56789999998753 222 467888888884 99999999999998764321100 01 011122246
Q ss_pred CeeeEEEcc--CCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 76 LASCLTWNH--SFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
.+.+++|+| ++++++++ +++|| +......|...+.+++|+++..+|++|+.|+.|++||+++
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~----- 201 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS----- 201 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC-----
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-----
Confidence 799999999 99998765 79999 2333324566899999996655559999999999999987
Q ss_pred eeee-eeecC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 143 IETI-GNFED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 143 ~~~~-~~~~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
...+ ..+.. |..+|.+++|+|++.+|++++ |+.|++||+++.+....+
T Consensus 202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 3444 56676 999999999999999999999 559999999987765443
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=153.55 Aligned_cols=170 Identities=21% Similarity=0.316 Sum_probs=135.2
Q ss_pred ccccccceeeeee-----eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRRS-----NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++.+++|+... .+. .|...|.+++|+|+ +.+|++|+.||.|++||+.+++.+..+. .+...+.++
T Consensus 110 ~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~ 182 (401)
T 4aez_A 110 ALERNVYVWNADSGSVSALAETDESTYVASVKWSHD--GSFLSVGLGNGLVDIYDVESQTKLRTMA-----GHQARVGCL 182 (401)
T ss_dssp EETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEE
T ss_pred ECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCC--CCEEEEECCCCeEEEEECcCCeEEEEec-----CCCCceEEE
Confidence 4678899997542 233 38899999999998 9999999999999999998876543332 236789999
Q ss_pred EEccCCCcccce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+|+ +..++++ +++|+ +..+. .|...|.+++|+++.-+|++++.|+.|++||+++ ...+..
T Consensus 183 ~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-----~~~~~~ 254 (401)
T 4aez_A 183 SWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS-----SIPKFT 254 (401)
T ss_dssp EEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC-----SSEEEE
T ss_pred EEC--CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC-----CCccEE
Confidence 994 4566554 79999 45566 8999999999995544449999999999999986 567778
Q ss_pred ecCceecEEEEEEccCC-CEEEEEe--CCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITG-TIVASSG--DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~-~~l~~~~--~dg~i~iw~~~~~~~~~~~ 191 (197)
+..|...|.+++|+|++ .++++++ .|+.|++||+++++....+
T Consensus 255 ~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~ 300 (401)
T 4aez_A 255 KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV 300 (401)
T ss_dssp ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE
T ss_pred ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 88899999999999976 5666654 7999999999987665444
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-22 Score=145.32 Aligned_cols=152 Identities=14% Similarity=0.165 Sum_probs=129.6
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 92 (197)
.+.+..++.+|.++|.+++| |+ +.+|++++.||.|++||+.+.+....+. .+...+.+++|+|++..++++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VD--DSKVASVSRDGTVRLWSKDDQWLGTVVY-----TGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EE--TTEEEEEETTSEEEEEEESSSEEEEEEE-----ECSSCEEEEEEETTTTEEEEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cC--CCEEEEEEcCCcEEEEECCCCEEEEEee-----cCCccEEEEEECCCCCEEEEec
Confidence 45667789999999999999 88 8999999999999999997765432222 236789999999999998766
Q ss_pred ----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 ----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 ----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+++|+ +..+. .|...|.+++|+++.+ ++++.|+.|++||. ......+..|...+.++
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~l--~~~~~d~~i~~~d~-------~~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSFQDGVV--ISGSWDKTAKVWKE-------GSLVYNLQAHNASVWDA 148 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEEETTEE--EEEETTSEEEEEET-------TEEEEEEECCSSCEEEE
T ss_pred CCCeEEEEEeeecCCCCcccchh-hcccCEEEEEecCCEE--EEEeCCCCEEEEcC-------CcEEEecccCCCceeEE
Confidence 78898 44556 7999999999998888 99999999999993 56677788899999999
Q ss_pred EEcc-CCCEEEEEeCCCcEEEEEcC
Q psy13207 160 SWNI-TGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 160 ~~~p-~~~~l~~~~~dg~i~iw~~~ 183 (197)
+|+| +++++++++.||.|++||..
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d~~ 173 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQND 173 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEccCCCCEEEEEECCCCEEEEecC
Confidence 9998 89999999999999999944
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=164.85 Aligned_cols=173 Identities=16% Similarity=0.227 Sum_probs=141.0
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (197)
..++.+++|+.. ..+.+|.+.|.+++|+|+ +.+|++++.||.|++||+.++... ...+. +...+.++
T Consensus 74 ~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~~~-----~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 74 SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWAL-----EQTFEGHEHFVMCV 146 (814)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTSEE-----EEEEECCSSCEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCceE-----EEEEcCCCCcEEEE
Confidence 457899999853 467889999999999999 999999999999999999875322 12222 26789999
Q ss_pred EEcc-CCCcccce-----eEEEE------eeEecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 81 TWNH-SFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 81 ~~~~-~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+|+| ++..++++ +++|+ ...+...+...+.+++|++ +.-.+++++.|+.|++||.++ ...+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-----~~~~ 221 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-----KSCV 221 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-----TEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-----CcEE
Confidence 9999 77777655 79999 3344424558899999984 555559999999999999976 5677
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+.+|...|.+++|+|++++|++++.||.|++||+.+++....+
T Consensus 222 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 222 ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 888889999999999999999999999999999999886654443
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-22 Score=149.83 Aligned_cols=175 Identities=14% Similarity=0.156 Sum_probs=134.4
Q ss_pred cccccccceeeeeee-----e-------------cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 6 LQSEKCLNQWTRRSN-----L-------------VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~-----~-------------~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
+..++.+++|++... + .+|...|.+++|+|++ +.+|++++.||.|++||+.+++....+
T Consensus 62 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~-- 138 (408)
T 4a11_B 62 GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD-TGMFTSSSFDKTLKVWDTNTLQTADVF-- 138 (408)
T ss_dssp EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC-TTCEEEEETTSEEEEEETTTTEEEEEE--
T ss_pred EcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC-CcEEEEEeCCCeEEEeeCCCCccceec--
Confidence 456889999987632 1 2599999999999931 789999999999999999987654333
Q ss_pred cceeccCCCeeeEEEccCCC---cccce-----eEEEE------eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEE
Q psy13207 68 QHEVACPTLASCLTWNHSFS---RFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKV 132 (197)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~ 132 (197)
.....+.++.|.+.+. .++++ +++|+ +..+. .|...|.+++|+++.- +|++++.|+.|++
T Consensus 139 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i 213 (408)
T 4a11_B 139 ----NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKL 213 (408)
T ss_dssp ----ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred ----cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEE
Confidence 2356788999998654 56554 79999 55666 8999999999994321 2389999999999
Q ss_pred EEccCCccc-----------ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 133 TRDVMGTRF-----------DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 133 ~d~~~~~~~-----------~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
||+++.... ..........|...|.+++|+|++++|++++.||.|++||+++++..
T Consensus 214 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 214 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp EETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred EECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 999763100 00111122578899999999999999999999999999999886643
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-23 Score=150.48 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=136.9
Q ss_pred cccccccceeee-e----eeecC--CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC---------cccccceeccc
Q psy13207 6 LQSEKCLNQWTR-R----SNLVD--SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD---------VMNLSQWCLQH 69 (197)
Q Consensus 6 ~~~~~~~~~w~~-~----~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~---------~~~~~~~~~~~ 69 (197)
+..++.+++|++ . ..+.+ |...|.+++|+| +..|++++.|+.|++||+++ .+.+..
T Consensus 75 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----- 146 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN----- 146 (342)
T ss_dssp EETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-----
T ss_pred EcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCeeeE-----
Confidence 346789999988 4 35778 999999999998 56899999999999999986 443322
Q ss_pred eeccCCCeeeEEEccCCCcccce-----eEEEEeeE--------ecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEc
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI-----SIMYEAHS--------INAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~ 135 (197)
+.....+.+++|+|++ ++++ +++|++.. ....|...+.+++|++ +.-++++++.|+.|++|++
T Consensus 147 -~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 147 -TKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp -SSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred -EeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 2246789999999988 4333 89999443 2225778899999997 5555699999999999999
Q ss_pred cCCc-ccceeeeeeecCcee---------cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 136 VMGT-RFDIETIGNFEDHYC---------TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 136 ~~~~-~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+... .........+..|.. .|.+++|+|++++|++++.||.|++||+.+++....+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 7520 000144555666654 999999999999999999999999999998876655544
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-22 Score=146.77 Aligned_cols=165 Identities=16% Similarity=0.234 Sum_probs=133.0
Q ss_pred ccccceeeeeee----------------ecCCCc--ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-ccccceeccc
Q psy13207 9 EKCLNQWTRRSN----------------LVDSRT--SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-MNLSQWCLQH 69 (197)
Q Consensus 9 ~~~~~~w~~~~~----------------~~~h~~--~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~ 69 (197)
++.+++|++... +..|.. .+.+++|+|+ +.+|++++.||.|++||+.+. +....+.
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--- 215 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK--GKYIIAGHKDGKISKYDVSNNYEYVDSID--- 215 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG--GCEEEEEETTSEEEEEETTTTTEEEEEEE---
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC--CCEEEEEcCCCEEEEEECCCCcEeEEEEe---
Confidence 378888887542 334555 8999999998 999999999999999999873 3222211
Q ss_pred eeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCC----------
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ---------- 128 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~---------- 128 (197)
.+...+.+++|+|++.+++++ +++|| +..+ .+...+..++|+++.-.+++++.++
T Consensus 216 --~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 216 --LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY--ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp --CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred --cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee--cCCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 136789999999999988765 79999 3333 3678899999994444448888887
Q ss_pred ----eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 129 ----NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 129 ----~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+++||..+ .+.+..+.+|...|.+++|+|++++|++++.||.|++|+++.+..
T Consensus 292 ~~~~~i~~~d~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 292 EGKFEARFYHKIF-----EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp ---CEEEEEETTT-----CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred CCcceeEEEecCC-----CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 899999976 677788889999999999999999999999999999999987543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=156.94 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=123.6
Q ss_pred cccccceeeeee--eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc
Q psy13207 8 SEKCLNQWTRRS--NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 8 ~~~~~~~w~~~~--~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
.++....|+... .+. .|...|.+++|+|+ |..||+++.||.|++||... .+..+. .........+.+++|+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPd--G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 65 FENKLDFELAQQNGLLNSQPVCYPRVCKPSPI--DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSS--SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS
T ss_pred CcceEEEEeCCCceEeecCCCCcEEEEEECCC--CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC
Confidence 444555554332 233 56889999999999 99999999999999999543 222111 11111134699999999
Q ss_pred CCCcccce-----eEEEE-----e--------eEec---ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 85 SFSRFNSI-----SIMYE-----A--------HSIN---AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 85 ~~~~~~~~-----~~~~~-----~--------~~~~---~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
+|++++++ +++|+ + ..+. .+|...|.+++|+|+.+ ++++.|+.|++||+..... .
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgL--aass~D~tVrlWd~~~~~~--~ 215 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVL--VAALSNNSVFSMTVSASSH--Q 215 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEE--EEEETTCCEEEECCCSSSS--C
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcE--EEEeCCCeEEEEECCCCcc--c
Confidence 99999877 79999 1 3331 26788999999997775 9999999999999975210 1
Q ss_pred eeeeee-cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 144 ETIGNF-EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 144 ~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.....+ .+|...|.+++|+ |++||+++ +++|++||+..+..
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred cceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 123345 4788899999999 68999987 69999999987554
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-22 Score=151.85 Aligned_cols=167 Identities=17% Similarity=0.264 Sum_probs=136.4
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|.++|.++.| + +++|++|+.||+|++||+.+++.+..+. .+...+.++
T Consensus 149 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~l 219 (435)
T 1p22_A 149 GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--D--ERVIITGSSDSTVRVWDVNTGEMLNTLI-----HHCEAVLHL 219 (435)
T ss_dssp EESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--C--SSEEEEEETTSCEEEEESSSCCEEEEEC-----CCCSCEEEE
T ss_pred EeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--C--CCEEEEEcCCCeEEEEECCCCcEEEEEc-----CCCCcEEEE
Confidence 4578899999854 468899999999999 5 7799999999999999999876543332 236688999
Q ss_pred EEccCCCcccce-----eEEEE------e---eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------A---HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~---~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.|+++ .++++ +++|+ . ..+. +|...|.+++|.++.+ ++|+.|+.|++||+++ .+.+
T Consensus 220 ~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~s~~~dg~i~vwd~~~-----~~~~ 289 (435)
T 1p22_A 220 RFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDFDDKYI--VSASGDRTIKVWNTST-----CEFV 289 (435)
T ss_dssp ECCTT--EEEEEETTSCEEEEECSSSSCCEEEEEEC-CCSSCEEEEEEETTEE--EEEETTSEEEEEETTT-----CCEE
T ss_pred EEcCC--EEEEeeCCCcEEEEeCCCCCCceeeeEec-CCCCcEEEEEeCCCEE--EEEeCCCeEEEEECCc-----CcEE
Confidence 99753 55444 79999 1 4555 8999999999988888 9999999999999977 6778
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
..+.+|...|.+++| +++++++|+.||.|++||++++.....+..
T Consensus 290 ~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 290 RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG 334 (435)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC
Confidence 888899999999998 478999999999999999998776655543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-21 Score=149.96 Aligned_cols=173 Identities=14% Similarity=0.151 Sum_probs=134.2
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec-------------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL------------- 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~------------- 67 (197)
+..|+++++|++. ..+.+|.++|.+++|++..++.+|++|+.||+|++||+.+.........
T Consensus 179 ~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 179 GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred EeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 4678999999854 4678999999999999532289999999999999999987654322110
Q ss_pred ----cceec-cCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 68 ----QHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 68 ----~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
...+. +...+.+ +++++.+++++ +++|| +..+. +|...|.+++|+++.-++++|+.|+.|+
T Consensus 259 ~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~ 335 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASMDTTIR 335 (464)
T ss_dssp CTTEEEEECCCSSCEEE--EEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CeEEEEEccCccceEEE--EcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 01111 1334444 46777777665 79999 56677 8999999999995433349999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+||+++ .+++..+.+|...|.+++|+ +++|++++.||+|++||+++....
T Consensus 336 vwd~~~-----~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 336 IWDLEN-----GELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEETTT-----TEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCC-----CcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 999977 67888899999999999997 589999999999999999876543
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-22 Score=152.10 Aligned_cols=162 Identities=16% Similarity=0.272 Sum_probs=134.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|...|.++.|+++ .+++|+.||.|++||+.++..... ...+. +...+.+
T Consensus 189 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~---~~~~~~~~~~v~~ 261 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITL---RRVLVGHRAAVNV 261 (435)
T ss_dssp EETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEE---EEEECCCSSCEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCcee---eeEecCCCCcEEE
Confidence 4678999999864 467899999999999753 899999999999999987654321 11222 3678889
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+.| ++.+++++ +++|| +..+. +|...|.+++|+++.+ ++|+.|+.|++||+++ ..++..
T Consensus 262 ~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~~g~~dg~i~iwd~~~-----~~~~~~ 331 (435)
T 1p22_A 262 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRDRLV--VSGSSDNTIRLWDIEC-----GACLRV 331 (435)
T ss_dssp EEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEETTEE--EEEETTSCEEEEETTT-----CCEEEE
T ss_pred EEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeCCCEE--EEEeCCCeEEEEECCC-----CCEEEE
Confidence 988 66666654 89999 66677 8999999999998888 9999999999999987 677888
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+.+|...|.+++| ++++|++|+.||.|++||+++..
T Consensus 332 ~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 332 LEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 9999999999999 78899999999999999997644
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-22 Score=151.48 Aligned_cols=173 Identities=15% Similarity=0.246 Sum_probs=131.6
Q ss_pred cccccceeeee-----e--eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 8 SEKCLNQWTRR-----S--NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 8 ~~~~~~~w~~~-----~--~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
.|++|++|+.. . .+.+|...|++++|+|+ |++|++|+.||+|+|||+.+++.+..+. .+...+.++
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd--g~~lasgs~Dg~v~iWd~~~~~~~~~~~-----~h~~~v~~~ 195 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMT-----SHSARVGSL 195 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEE
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC--CCEEEEEECCCeEEEEEcCCCcEEEEEe-----CCCCceEEE
Confidence 47889999854 2 24578889999999999 9999999999999999999886554332 124567777
Q ss_pred EEccCCCcccce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
.++ +..++++ +.+|+ +..+. +|...+..+.|+++.-.+++++.|+.+++|+..+.... ...+..
T Consensus 196 s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~-~~~~~~ 271 (420)
T 4gga_A 196 SWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG-WVPLQT 271 (420)
T ss_dssp EEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC-SCCSEE
T ss_pred eeC--CCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCCeeeeeeccccceEEeecccccc-ceeeee
Confidence 664 5566554 68888 55667 89999999999944444499999999999999763221 234556
Q ss_pred ecCceecEEEEEEccCC-CEEEE--EeCCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITG-TIVAS--SGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~-~~l~~--~~~dg~i~iw~~~~~~~~~~~ 191 (197)
...|...|.+++|+|++ .++++ |+.|++|++||+.++.....+
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 67889999999999965 55555 457999999999987655443
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=149.72 Aligned_cols=166 Identities=16% Similarity=0.247 Sum_probs=135.7
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+++|+.. ..+.+|..+|.++.|++ ..|++|+.||+|++||+.+++.+..+. .+...+.++
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~ 205 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD----NIIISGSTDRTLKVWNAETGECIHTLY-----GHTSTVRCM 205 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET----TEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEE
T ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC----CEEEEEeCCCeEEEEECCcCcEEEEEC-----CCCCcEEEE
Confidence 4678899999853 46889999999999974 489999999999999998876543322 135678899
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|++ ..++++ +++|+ +..+. +|...+.+++|+++.+ ++++.|+.|++||.++ .+.+..+
T Consensus 206 ~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~~~~~dg~i~iwd~~~-----~~~~~~~ 275 (445)
T 2ovr_B 206 HLHE--KRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQYDGRRV--VSGAYDFMVKVWDPET-----ETCLHTL 275 (445)
T ss_dssp EEET--TEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEECSSCE--EEEETTSCEEEEEGGG-----TEEEEEE
T ss_pred EecC--CEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEECCCEE--EEEcCCCEEEEEECCC-----CcEeEEe
Confidence 9864 445443 79999 55666 8999999999988888 9999999999999976 6778888
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+|...|.+++| +++++++++.||.|++||+++++....+.
T Consensus 276 ~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 276 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 899999999999 78899999999999999998877655443
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=171.25 Aligned_cols=169 Identities=12% Similarity=0.211 Sum_probs=143.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++... ...+...+.++
T Consensus 979 g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d--g~~l~s~~~dg~i~vwd~~~~~~~~------~~~~~~~v~~~ 1050 (1249)
T 3sfz_A 979 GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD--GKTLISSSEDSVIQVWNWQTGDYVF------LQAHQETVKDF 1050 (1249)
T ss_dssp EETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSS--SSCEEEECSSSBEEEEETTTTEEEC------CBCCSSCEEEE
T ss_pred EcCCCCEEEEEcCCCceeeecccCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCceEE------EecCCCcEEEE
Confidence 3567888888754 457789999999999999 9999999999999999998875432 12336789999
Q ss_pred EEccCCCcccce----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
.|+|++..+..+ +++|+ +..+. +|...|.+++|+ +..+ ++++.|+.|++||+.+ ...+..
T Consensus 1051 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l--~s~s~d~~v~iwd~~~-----~~~~~~ 1122 (1249)
T 3sfz_A 1051 RLLQDSRLLSWSFDGTVKVWNVITGRIERDFT-CHQGTVLSCAISSDATKF--SSTSADKTAKIWSFDL-----LSPLHE 1122 (1249)
T ss_dssp EECSSSEEEEEESSSEEEEEETTTTCCCEEEE-CCSSCCCCEEECSSSSSC--EEECCSSCCCEECSSS-----SSCSBC
T ss_pred EEcCCCcEEEEECCCcEEEEECCCCceeEEEc-ccCCcEEEEEECCCCCEE--EEEcCCCcEEEEECCC-----cceeee
Confidence 999988766543 89999 56677 899999999999 4566 9999999999999976 566778
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.+|...|.+++|+|+|++|++++.||.|++||+.+++....
T Consensus 1123 l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~ 1164 (1249)
T 3sfz_A 1123 LKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHS 1164 (1249)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCC
T ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE
Confidence 889999999999999999999999999999999998776544
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-21 Score=146.38 Aligned_cols=166 Identities=11% Similarity=0.031 Sum_probs=130.5
Q ss_pred cccccccceeeee--e-----eec--CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCC
Q psy13207 6 LQSEKCLNQWTRR--S-----NLV--DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~--~-----~~~--~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~ 75 (197)
+..++.+++|++. . .+. .|...|.+++|+|+ +.+|++|+.||.+++|++.+...... ....+ .+..
T Consensus 121 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~~g~v~~~~~~~~~~~~~--~~~~~~~h~~ 196 (450)
T 2vdu_B 121 ADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED--DTTVIIADKFGDVYSIDINSIPEEKF--TQEPILGHVS 196 (450)
T ss_dssp EGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEEETTSCCCSSC--CCCCSEECSS
T ss_pred ECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC--CCEEEEEeCCCcEEEEecCCcccccc--cceeeecccC
Confidence 3467899999987 2 233 57789999999999 99999999999999999987654320 01111 2367
Q ss_pred CeeeEEEccC---CCcccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcc
Q psy13207 76 LASCLTWNHS---FSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTR 140 (197)
Q Consensus 76 ~~~~~~~~~~---~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~ 140 (197)
.+.+++|+|+ +++++++ +++|+ +..+..+|...|.+++|+ +..+ ++++.|+.|++||+++
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l--~s~~~d~~v~vwd~~~--- 271 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLL--LSAGGDDKIFAWDWKT--- 271 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEE--EEEESSSEEEEEETTT---
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEE--EEEeCCCeEEEEECCC---
Confidence 8999999999 8888765 89999 334222799999999998 5555 9999999999999987
Q ss_pred cceeeeeeec-------------------------CceecEEEEEEccCCCEEEEEe-CCCcEEEEEc
Q psy13207 141 FDIETIGNFE-------------------------DHYCTVWRVSWNITGTIVASSG-DDGCVRLWKL 182 (197)
Q Consensus 141 ~~~~~~~~~~-------------------------~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~ 182 (197)
.+.+..+. .....|.+++|+|++++|++++ .|+.|++|++
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 272 --GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp --CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred --CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 34444443 2235689999999999999999 8999999999
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=152.00 Aligned_cols=165 Identities=9% Similarity=0.121 Sum_probs=125.6
Q ss_pred cccccccceeee---eeeecCCCc-----ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc-ceeccceec----
Q psy13207 6 LQSEKCLNQWTR---RSNLVDSRT-----SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS-QWCLQHEVA---- 72 (197)
Q Consensus 6 ~~~~~~~~~w~~---~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~-~~~~~~~~~---- 72 (197)
...++++++|+. ...+. |.. .|.+++|+|+ |++||+|+.||+|+|||+.++.... .+....++.
T Consensus 103 ~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~ 179 (588)
T 2j04_A 103 LSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA 179 (588)
T ss_dssp EETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT
T ss_pred EeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc
Confidence 356889999984 33456 665 4999999999 9999999999999999998864211 111122321
Q ss_pred -cCCCeeeEEEccCCCcccce----eEEEEe---------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCC
Q psy13207 73 -CPTLASCLTWNHSFSRFNSI----SIMYEA---------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~ 138 (197)
+...|.+++|+|++ .++++ +++|++ ..+..+|...|.+++|+++.+ ++++ ++.|++||..+
T Consensus 180 gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~L--ASa~-~~tIkLWd~~~- 254 (588)
T 2j04_A 180 GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKV--VLTC-PGYVHKIDLKN- 254 (588)
T ss_dssp TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEE--EEEC-SSEEEEEETTT-
T ss_pred cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEE--EEEe-CCeEEEEECCC-
Confidence 24689999999999 44333 899991 235327889999999996666 7776 69999999975
Q ss_pred cccceeeeeeecCceecEEEEEE--ccCCCEEEEEeCCCcEEEEEcC
Q psy13207 139 TRFDIETIGNFEDHYCTVWRVSW--NITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 139 ~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
........+|...|+.++| +|++..+++++.||+ ++|..+
T Consensus 255 ----~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 255 ----YSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp ----TEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred ----CeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 3332333379999999999 999999999999999 999975
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=147.78 Aligned_cols=169 Identities=12% Similarity=0.133 Sum_probs=115.2
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccc----------
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQH---------- 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~---------- 69 (197)
+..|+++++|++.. .+.+|.++|.+++|+|+ + .+|++++.||+|++||+.+++.........
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~--~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPS--NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETT--EEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EECCCeEEEEECCCCceeeeecCCCCCcEEEEECCC--CCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 46799999999753 46689999999999997 5 589999999999999998765432211000
Q ss_pred ----------eeccCCCeeeEEEc-cCCCcccce-----eEEEEee------EecccCCCcee-----------------
Q psy13207 70 ----------EVACPTLASCLTWN-HSFSRFNSI-----SIMYEAH------SINAEHKDLIH----------------- 110 (197)
Q Consensus 70 ----------~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~------~~~~~~~~~i~----------------- 110 (197)
...+...+.++.|. +++..++++ +++|++. .+. .|...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCS
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEEEccccccccccCcc
Confidence 00124567888886 788887665 7999821 121 2222222
Q ss_pred -EEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 111 -DVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 111 -~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
...|+ .+..++++|+.|+.|++||..+ ......+.+|..+|.+++|+|||++||+++.|| +.+|.+.
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-----~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYE-----KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTC-----TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCC-----CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 22333 3444558889999999999976 455555667888999999999999999998765 5556543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=145.36 Aligned_cols=170 Identities=12% Similarity=0.153 Sum_probs=126.7
Q ss_pred cccccccceeeeee----eecCCCcceeEEEE--CCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce---------
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKF--GPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--------- 70 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~--~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--------- 70 (197)
+..++.+++|++.. .+.+|..+|.++.| +|+ +.+|++++.||.|++||+++++.+..+.....
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPN--YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSS--CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred EcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCC--CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 45688999998642 36679999999999 887 99999999999999999988765544332110
Q ss_pred -------------------------ec--cCCCeeeEEEccCCCc----ccce-----eEEEE---------eeEecccC
Q psy13207 71 -------------------------VA--CPTLASCLTWNHSFSR----FNSI-----SIMYE---------AHSINAEH 105 (197)
Q Consensus 71 -------------------------~~--~~~~~~~~~~~~~~~~----~~~~-----~~~~~---------~~~~~~~~ 105 (197)
.. ......++.+.++... ++++ +++|+ +..+. .|
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~ 260 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK-CH 260 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE-CS
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee-ee
Confidence 00 0233455555555443 4443 68998 33444 55
Q ss_pred CC------------ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 106 KD------------LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 106 ~~------------~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
.. .|.+++|+++.-+|++++.||.|++||+++ .+++..+.+|...|.+++|+|+|++|++++.
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-----RTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT-----TEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC-----CcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 54 699999994433339999999999999986 6778888999999999999999999999999
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
|+..+.|++-
T Consensus 336 d~~~~~~~~~ 345 (368)
T 3mmy_A 336 YDWSKGHEFY 345 (368)
T ss_dssp CCSTTCGGGC
T ss_pred cccccccccc
Confidence 8866655543
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-21 Score=141.95 Aligned_cols=168 Identities=8% Similarity=-0.068 Sum_probs=132.1
Q ss_pred cccccccceeeee--------eeecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEc-CCcccccceeccceeccCC
Q psy13207 6 LQSEKCLNQWTRR--------SNLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEA-PDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~--------~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~-~~~~~~~~~~~~~~~~~~~ 75 (197)
+..++.+++|++. ..+.+|...|.+++|+|+ ++ +|++|+.||.|++||+ .+.+. ..+. ...+..
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~---~~~~~~ 102 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN--TDLQIYVGTVQGEILKVDLIGSPSF-QALT---NNEANL 102 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES--SSEEEEEEETTSCEEEECSSSSSSE-EECB---SCCCCS
T ss_pred EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC--CCcEEEEEcCCCeEEEEEeccCCce-Eecc---ccCCCC
Confidence 3567889999864 235589999999999998 99 9999999999999999 76643 1111 001467
Q ss_pred CeeeEEEccCCCcccce-----eEEEEeeE---------ec----ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYEAHS---------IN----AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~~~~---------~~----~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
.+.+++|+| +..++++ +++|++.. .. -.|...+.+++|+++.+ ++++.|+.|++||+++
T Consensus 103 ~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l--~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 103 GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL--IVGMNNSQVQWFRLPL 179 (342)
T ss_dssp CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE--EEEESTTEEEEEESSC
T ss_pred ceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcE--EEEeCCCeEEEEECCc
Confidence 899999999 7777655 79999443 21 13778899999997777 9999999999999975
Q ss_pred -CcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCC
Q psy13207 138 -GTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 138 -~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.. .........|...|.+++|+| +++++++++.||.|++|+++..
T Consensus 180 ~~~---~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 180 CED---DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp CTT---CCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred ccc---ccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 21 112233456788999999999 9999999999999999999876
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-21 Score=150.43 Aligned_cols=170 Identities=16% Similarity=0.253 Sum_probs=137.4
Q ss_pred cccccccceeeee-------------eeecCCCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceecc
Q psy13207 6 LQSEKCLNQWTRR-------------SNLVDSRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQ 68 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~ 68 (197)
+..++.+++|++. ..+..|..+|.+++|+|+ +++|++++.+ +.|.+||. ++.+..+
T Consensus 84 ~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d~--~~~~~~~--- 156 (615)
T 1pgu_A 84 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDS--GNSLGEV--- 156 (615)
T ss_dssp EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTT--CCEEEEC---
T ss_pred ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEeccCCCCccEEEEEEC--CCcceee---
Confidence 3568899999984 136679999999999999 9999999988 78888883 2222111
Q ss_pred ceeccCCCeeeEEEccCCC-cccce-----eEEEE------eeEecccCCC---ceeEEEEcCC-CeEEEEeeCCCeEEE
Q psy13207 69 HEVACPTLASCLTWNHSFS-RFNSI-----SIMYE------AHSINAEHKD---LIHDVAYDYY-GLRMATCSSDQNIKV 132 (197)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~------~~~~~~~~~~---~i~~~~~~~~-~~~~~s~~~d~~i~~ 132 (197)
..+...+.+++|+|++. .++++ +++|+ +..+. .|.. .|.+++|+++ .-+|++++.|+.|++
T Consensus 157 --~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 157 --SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp --CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred --ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 12367899999999998 45544 89999 55666 7888 9999999966 545599999999999
Q ss_pred EEccCCcccceeeeeee-c---CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 133 TRDVMGTRFDIETIGNF-E---DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
||+++ .+.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++....+
T Consensus 234 wd~~~-----~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 234 FDGKS-----GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EETTT-----CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EECCC-----CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 99976 5667777 5 899999999999 9999999999999999999987655443
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-21 Score=145.09 Aligned_cols=162 Identities=15% Similarity=0.220 Sum_probs=128.1
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...|.++.| + +..+++++.||.|++||+.+++.+..+. .+...+.++
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~ 325 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D--GIHVVSGSLDTSIRVWDVETGNCIHTLT-----GHQSLTSGM 325 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--C--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCCSCEEEE
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--C--CCEEEEEeCCCeEEEEECCCCCEEEEEc-----CCcccEEEE
Confidence 3567888999753 457889999999999 5 7789999999999999998876543322 124556666
Q ss_pred EEccCCCcccce-----eEEEE------eeEecc--cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINA--EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
.++ +..++++ +++|| +..+.. .|...|.+++|+++.+ ++++.||.|++||+++ ++.+.
T Consensus 326 ~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l--~s~~~dg~v~iwd~~~-----~~~~~ 396 (445)
T 2ovr_B 326 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSDDGTVKLWDLKT-----GEFIR 396 (445)
T ss_dssp EEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEE--EEEETTSEEEEEETTT-----CCEEE
T ss_pred EEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEE--EEEeCCCeEEEEECCC-----Cceee
Confidence 664 5566554 79999 445541 2888999999998888 9999999999999987 45555
Q ss_pred ee-----cCceecEEEEEEccCCCEEEEEeCCCc----EEEEEcCCC
Q psy13207 148 NF-----EDHYCTVWRVSWNITGTIVASSGDDGC----VRLWKLKKK 185 (197)
Q Consensus 148 ~~-----~~h~~~v~~~~~~p~~~~l~~~~~dg~----i~iw~~~~~ 185 (197)
.+ ..|...|++++|+|++.++++|+.||+ +.+||++..
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 55 467889999999999999999999998 999999764
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-20 Score=139.64 Aligned_cols=157 Identities=13% Similarity=0.217 Sum_probs=119.4
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-ccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-MNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++++++|+.. ..+. |..+|.++.|+++ . ++.+ .|+.|++||+.+. +.+..+.. +...+
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~~~~ 143 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSRE--F--IVVS-YGDVISVFKFGNPWKRITDDIR--------FGGVC 143 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--E--EEEE-ETTEEEEEESSTTCCBSSCCEE--------EEEEE
T ss_pred CCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCC--E--EEEE-EcCEEEEEECCCCceeeEEecc--------CCceE
Confidence 445789999864 2343 6779999999986 3 3333 4789999999887 54443332 23344
Q ss_pred EEccCCCcccc-------eeEEEEee----------------------EecccCCCceeEEEEcCCCeEEEEeeCCCe-E
Q psy13207 81 TWNHSFSRFNS-------ISIMYEAH----------------------SINAEHKDLIHDVAYDYYGLRMATCSSDQN-I 130 (197)
Q Consensus 81 ~~~~~~~~~~~-------~~~~~~~~----------------------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~-i 130 (197)
++++ ..++. .+++||+. .+. +|...|.+++|+++.-+|++|+.|++ |
T Consensus 144 ~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 5555 33332 27899932 345 89999999999955545599999998 9
Q ss_pred EEEEccCCcccceeeeeeec-C-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 131 KVTRDVMGTRFDIETIGNFE-D-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
++||+++ .+++..+. + |...|.+++|+|++++|++++.|++|++||++..
T Consensus 221 ~iwd~~~-----~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 221 RVFKTED-----GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTT-----CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEECCC-----CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9999987 67777777 5 9999999999999999999999999999999764
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-20 Score=133.44 Aligned_cols=146 Identities=17% Similarity=0.266 Sum_probs=121.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE---- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---- 97 (197)
..++|+|+++ + +||+| .|++|+|||+.+++.++.+... .+...|.+++|+|++++++++ +++|+
T Consensus 27 y~~~l~WS~~--~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~---~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 27 YLNLVDWSSG--N-VLAVA-LDNSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp TCBCEEECTT--S-EEEEE-ETTEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred cceEEEECCC--C-EEEEE-eCCEEEEEECCCCCEEEEEEec---CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 3578999986 5 66665 5999999999988765433321 125679999999999999876 89999
Q ss_pred --eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
+..+. +|...+.++.+.+..+ ++++.++.+++|+.... ...+..+.+|...+..+.+++++++|++++.||
T Consensus 100 ~~~~~~~-~h~~~~~~~~~~~~~l--~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 100 KRLRNMT-SHSARVGSLSWNSYIL--SSGSRSGHIHHHDVRVA----EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp EEEEEEE-CCSSCEEEEEEETTEE--EEEETTSEEEEEETTSS----SCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeEEEec-CccceEEEeecCCCEE--EEEecCCceEeeecCCC----ceeEEEEcCccCceEEEEEcCCCCEEEEEecCc
Confidence 66677 8999999888888888 99999999999998753 456677888999999999999999999999999
Q ss_pred cEEEEEcCCCc
Q psy13207 176 CVRLWKLKKKR 186 (197)
Q Consensus 176 ~i~iw~~~~~~ 186 (197)
+|++||+++++
T Consensus 173 ~i~iwd~~~~~ 183 (318)
T 4ggc_A 173 LVNVWPSAPGE 183 (318)
T ss_dssp CEEEEESSCBT
T ss_pred ceeEEECCCCc
Confidence 99999998754
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=140.80 Aligned_cols=143 Identities=13% Similarity=0.198 Sum_probs=107.4
Q ss_pred cccccccceeeee---------------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCc-EEEEEcCCccccc
Q psy13207 6 LQSEKCLNQWTRR---------------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGL-VRIYEAPDVMNLS 63 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~-v~iw~~~~~~~~~ 63 (197)
+..++.+++|++. ..+.+|.++|.+++|+|+ |++|++|+.|++ |++||+++++.+.
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~--g~~l~s~s~d~~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK--SDMVATCSQDGTIIRVFKTEDGVLVR 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT--SSEEEEEETTCSEEEEEETTTCCEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC--CCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 5678899999875 457899999999999998 999999999998 9999998875432
Q ss_pred ceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEeccc-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAE-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
.+ ..+ |...|.+++|+++.-+|++++.|+.|++||++......
T Consensus 233 ~~------------------------------------~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 233 EF------------------------------------RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK 276 (355)
T ss_dssp EE------------------------------------ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC
T ss_pred EE------------------------------------EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc
Confidence 22 113 88889999999554444999999999999997532111
Q ss_pred eeeee-----------------ee-cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 143 IETIG-----------------NF-EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 143 ~~~~~-----------------~~-~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
...+. .+ ..+......++|+|+++++++++.||.+++|++...+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 277 RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 11100 00 0111223668999999999999999999999987644
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-20 Score=141.97 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=96.9
Q ss_pred CCcceeEEEECCCCCCcEEE----EEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 24 SRTSVTDVKFGPKQLGLVLA----TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~----s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
|...|.+++|+|+ +++|+ +|+.|+.|+|||+.+..... ... ...+.. +.
T Consensus 91 ~~~~v~~l~~spd--g~~lav~~~sgs~d~~v~iwd~~~~~~~~-~~~------~~~~~~------------------~~ 143 (434)
T 2oit_A 91 MKFPIHHLALSCD--NLTLSACMMSSEYGSIIAFFDVRTFSNEA-KQQ------KRPFAY------------------HK 143 (434)
T ss_dssp CSSCEEEEEECTT--SCEEEEEEEETTTEEEEEEEEHHHHHCTT-CSS------CCCSEE------------------EE
T ss_pred CCCcccEEEEcCC--CCEEEEEEeccCCCceEEEEEccccccCC-cCC------cceeee------------------ee
Confidence 5667999999999 99998 88999999999987541100 000 000000 12
Q ss_pred EecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 100 SINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
.+. +|...|.+++|+++ .-+|++++.|+.|++||+++ ...+....+|...|.+++|+|+|++|++|+.||+|+
T Consensus 144 ~~~-~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-----~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 144 LLK-DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-----TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp CCC-SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-----SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ccC-CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-----CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 223 78899999999943 33349999999999999986 344555567889999999999999999999999999
Q ss_pred EEEcC
Q psy13207 179 LWKLK 183 (197)
Q Consensus 179 iw~~~ 183 (197)
+||++
T Consensus 218 iwd~~ 222 (434)
T 2oit_A 218 QYLPT 222 (434)
T ss_dssp EECTT
T ss_pred EEccC
Confidence 99998
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.7e-18 Score=126.89 Aligned_cols=167 Identities=11% Similarity=0.044 Sum_probs=124.8
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.+++|+.. ..+..|. .+.+++|+|+ ++++ ++++.|+.|++||+.+++.+.. +.....+.+
T Consensus 8 ~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~~~~~~------~~~~~~v~~ 78 (391)
T 1l0q_A 8 NSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPD--GTKVYVANAHSNDVSIIDTATNNVIAT------VPAGSSPQG 78 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTT--SSEEEEEEGGGTEEEEEETTTTEEEEE------EECSSSEEE
T ss_pred cCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCC--CCEEEEECCCCCeEEEEECCCCeEEEE------EECCCCccc
Confidence 3567889999754 3455554 5899999998 8765 7888999999999988765433 233458899
Q ss_pred EEEccCCCcccc------eeEEEE------eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNS------ISIMYE------AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
++|+|++++++. .+++|| +..+. +...+.+++|+++.- ++++++.|+.|++||+++ .+.+
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-----~~~~ 151 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-----KAVI 151 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-----TEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-----CcEE
Confidence 999999997643 289999 33333 455789999994432 236788899999999976 4555
Q ss_pred eeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcchh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~~ 189 (197)
..+..+ ..+.+++|+|+++++ ++++.|+.|++||+++.+...
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 555554 456899999999887 577789999999998865443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-17 Score=123.42 Aligned_cols=167 Identities=8% Similarity=0.019 Sum_probs=123.0
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.++.+++|++.. .+. +...+.+++|+|+ ++.| ++++.|+.|++||+.+++....+ .....+.+++
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~------~~~~~~~~~~ 164 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPD--GKKLYVTNNGDKTVSVINTVTKAVINTV------SVGRSPKGIA 164 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTT--SSEEEEEETTTTEEEEEETTTTEEEEEE------ECCSSEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe-CCCCcceEEECCC--CCEEEEEeCCCCEEEEEECCCCcEEEEE------ecCCCcceEE
Confidence 457888887642 333 3456899999998 8766 78888999999999887544322 2245678999
Q ss_pred EccCCCccc-ce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEee---CCCeEEEEEccCCcccceeee
Q psy13207 82 WNHSFSRFN-SI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCS---SDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 82 ~~~~~~~~~-~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~---~d~~i~~~d~~~~~~~~~~~~ 146 (197)
|+|+++.++ ++ +.+|| +..+ .+...+.+++|+++.-++++++ .++.|++||+++ .+.+
T Consensus 165 ~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~-----~~~~ 237 (391)
T 1l0q_A 165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT-----NKIT 237 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT-----TEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC-----CeEE
Confidence 999998773 32 89999 2233 3567889999994432236666 689999999976 4556
Q ss_pred eeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcchhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+..|. .+.+++|+|+++++ ++++.|+.|++||+.+++....+
T Consensus 238 ~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 238 ARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 6666554 47899999999877 66788999999999887654443
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-17 Score=123.66 Aligned_cols=169 Identities=7% Similarity=-0.042 Sum_probs=125.9
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++.+++|++. ..+..|...+.+++|+|+ +..+ ++++.|+.|++||+.+++.... +.....+.++
T Consensus 188 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~~~d~~~~~~~~~------~~~~~~~~~~ 259 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI--RDLVYCSNWISEDISVIDRKTKLEIRK------TDKIGLPRGL 259 (433)
T ss_dssp GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT--TTEEEEEETTTTEEEEEETTTTEEEEE------CCCCSEEEEE
T ss_pred CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC--CCEEEEEecCCCcEEEEECCCCcEEEE------ecCCCCceEE
Confidence 456788899753 356688899999999998 7766 5666899999999987754322 2234568999
Q ss_pred EEccCCCcccce-------------eEEEE-----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCccc
Q psy13207 81 TWNHSFSRFNSI-------------SIMYE-----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 81 ~~~~~~~~~~~~-------------~~~~~-----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
+|+|+++.++.+ +++|+ +.... .|...+.+++|+++. .++++++.|+.|++||.++
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---- 334 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---- 334 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT----
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC----
Confidence 999999887544 45898 22222 355678899999443 3447778999999999976
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeC---------------CCcEEEEEcCCCcchhh
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGD---------------DGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~ 190 (197)
.+.+..+. +...+.+++|+|+|+++++++. ||.|++||+.+++....
T Consensus 335 -~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 335 -KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp -TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred -CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 44454444 5677899999999999988876 57999999988665443
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-17 Score=122.74 Aligned_cols=163 Identities=8% Similarity=-0.019 Sum_probs=122.6
Q ss_pred cccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCC---cEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADG---LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
+++++|+.. ..+.+|...|.+++|+|+ |+.|++++.|+ .|++||+.+++... .......+.+++|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spd--g~~la~~s~~~~~~~i~~~d~~tg~~~~------l~~~~~~~~~~~~ 230 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPD--GSKLAYVTFESGRSALVIQTLANGAVRQ------VASFPRHNGAPAF 230 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEEE------EECCSSCEEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCC--CCEEEEEEecCCCcEEEEEECCCCcEEE------eecCCCcccCEEE
Confidence 788899864 346788999999999999 99999999885 99999998875321 1112457899999
Q ss_pred ccCCCccc-ce-------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeC-CC--eEEEEEccCCcccceeee
Q psy13207 83 NHSFSRFN-SI-------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSS-DQ--NIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 83 ~~~~~~~~-~~-------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~~ 146 (197)
+|+++.++ ++ +++|+ ...+. .|...+.+++|+|+.-.|+.++. ++ .|.+||+.+ .. .
T Consensus 231 spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-----~~-~ 303 (415)
T 2hqs_A 231 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-----GA-P 303 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-----SC-C
T ss_pred cCCCCEEEEEEecCCCceEEEEECCCCCEEeCc-CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-----CC-E
Confidence 99999876 22 67888 45555 68888999999954433366665 45 677778765 22 2
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCC---CcEEEEEcCCCcc
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDD---GCVRLWKLKKKRK 187 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~d---g~i~iw~~~~~~~ 187 (197)
..+..+...+.+++|+|+|++|++++.+ ..|.+||+.+++.
T Consensus 304 ~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 304 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 3344566788999999999999988864 5899999987654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-17 Score=120.17 Aligned_cols=129 Identities=7% Similarity=-0.073 Sum_probs=93.3
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcC--
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDY-- 116 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 116 (197)
++.+++++. .+++|++.+++.+.... ..+...|..++++|+++. +..+. .|...++.++|++
T Consensus 127 ~~~l~s~g~--~~~v~~l~~g~lv~ss~----~g~d~~V~~~~~s~dG~~---------~~s~~-~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 127 KQVLLKSGN--IKAVLGLTKRRLVSSSG----TLSDQQVEVMTFAEDGGG---------KENQF-LMPPEETILTFAEVQ 190 (356)
T ss_dssp CEEEEEEEE--EEEEEEETTTEEEEEES----SSTTCEEEEEEECTTSCE---------EEEEE-ECCCSSCEEEEEEEE
T ss_pred ccEEEeCCC--eEEEEecCCCcEEEecc----cCCCCcEEEEEECCCCce---------eeeec-cCCCceeeEEeeccC
Confidence 466777664 47789886654332110 113678899999999987 33444 7888898988883
Q ss_pred -CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce---ecEEEEEEccCCCEE------------EEEeCCCcEEEE
Q psy13207 117 -YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY---CTVWRVSWNITGTIV------------ASSGDDGCVRLW 180 (197)
Q Consensus 117 -~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l------------~~~~~dg~i~iw 180 (197)
+.-+|++++.|++|++||+++ ++++..+.+|. ..+.+++|+|+|+++ ++|+.|++|++|
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~T-----Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKT-----GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTT-----CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred CCCceEEEecCCCcEEEEECCC-----CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 344449999999999999987 67778887654 367788999999876 668899999999
Q ss_pred EcCCCcch
Q psy13207 181 KLKKKRKK 188 (197)
Q Consensus 181 ~~~~~~~~ 188 (197)
|..+++..
T Consensus 266 d~~tgk~l 273 (356)
T 2w18_A 266 NPKTTLSV 273 (356)
T ss_dssp ETTTTEEE
T ss_pred ECCCCEEE
Confidence 99887654
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.8e-17 Score=122.61 Aligned_cols=154 Identities=8% Similarity=0.020 Sum_probs=117.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
..+.+++|+|+ +.++++++.|+.|++||+.+++............+...+.+++|++++..++++ +++|+
T Consensus 123 ~~~~~~~~s~~--~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDN--TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSS--SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCC--CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 45669999997 999999999999999999887654322211111225678999999999887665 79999
Q ss_pred ---eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-
Q psy13207 98 ---AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG- 172 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~- 172 (197)
+..+. .|...+.+++|+++. .++++++.|+.|++||+++ .+.+..+..+ ..+.+++|+|+++++++++
T Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-----~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 201 LAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-----KLEIRKTDKI-GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp CCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-----TEEEEECCCC-SEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-----CcEEEEecCC-CCceEEEEcCCCCEEEEEEC
Confidence 45555 788899999999433 3235666899999999976 4555555543 4589999999999999988
Q ss_pred -------CCCcEEEEEcCCCcch
Q psy13207 173 -------DDGCVRLWKLKKKRKK 188 (197)
Q Consensus 173 -------~dg~i~iw~~~~~~~~ 188 (197)
.||.|++||+++++..
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEE
T ss_pred CCCccccCCCeEEEEECCCCcEE
Confidence 4889999999876543
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=114.40 Aligned_cols=166 Identities=8% Similarity=0.018 Sum_probs=119.7
Q ss_pred Ccccccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-cccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-VMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (197)
....++++++|++. ..+..|...|.+++|+|+ +++|++++ ++.|.+||+.+ ++...... ......+.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spd--g~~l~~~~-~~~i~~~d~~~~~~~~~~~~----~~~~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPD--GKYLLLNS-EGLLYRLSLAGDPSPEKVDT----GFATICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTT--SSEEEEEE-TTEEEEEESSSCCSCEECCC----TTCCCBCSC
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCC--CCEEEEEc-CCeEEEEeCCCCCCceEecc----ccccccccc
Confidence 34677889999854 245678899999999999 99999886 78999999988 64332111 111357889
Q ss_pred EEEccCCCcccce-------eEEEE-------eeEecccCCCceeEEEEcCCCeEEE-EeeCCCeEEEEEccCCccccee
Q psy13207 80 LTWNHSFSRFNSI-------SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMA-TCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 80 ~~~~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
++|+|+++.++.+ ..+|. ...+. +...+..++|+++.-.|+ +++.++.+++|+++.. ..
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~----~~ 163 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID----SG 163 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT----TC
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECC----CC
Confidence 9999999987654 35665 22333 333488899994432224 7888999999997532 22
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
....+..+...+.+++|+|+|++|+.++ .++.+.+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 164 VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 3445566778899999999999888766 58999999986
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=121.33 Aligned_cols=134 Identities=20% Similarity=0.242 Sum_probs=99.2
Q ss_pred cccccccceeeee----------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc
Q psy13207 6 LQSEKCLNQWTRR----------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 69 (197)
+..|+.+++|++. ..+.+|...|.+++|+|+. +.+|++++.||+|++||+++.....
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~~~~------ 186 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETVKVC------ 186 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSEEEE------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCccee------
Confidence 4568899999753 2356799999999999963 6889999999999999998763210
Q ss_pred eeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
... +|...|.+++|+ ++.+ ++|+.|+.|++||.+. ....
T Consensus 187 ------------------------------~~~-~~~~~v~~v~wspdg~~l--asgs~dg~v~iwd~~~------~~~~ 227 (434)
T 2oit_A 187 ------------------------------ATL-PSTVAVTSVCWSPKGKQL--AVGKQNGTVVQYLPTL------QEKK 227 (434)
T ss_dssp ------------------------------EEE-CGGGCEEEEEECTTSSCE--EEEETTSCEEEECTTC------CEEE
T ss_pred ------------------------------ecc-CCCCceeEEEEcCCCCEE--EEEcCCCcEEEEccCC------cccc
Confidence 111 577788888998 4555 9999999999999872 1122
Q ss_pred eec-------CceecEEEEEEccCCCEEEEEe-CCCc------EEEEEcCCC
Q psy13207 148 NFE-------DHYCTVWRVSWNITGTIVASSG-DDGC------VRLWKLKKK 185 (197)
Q Consensus 148 ~~~-------~h~~~v~~~~~~p~~~~l~~~~-~dg~------i~iw~~~~~ 185 (197)
.+. .|...|.+++|++++.++++.+ .||. +++|++++.
T Consensus 228 ~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 228 VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 222 2345899999999988775533 4433 899999865
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.71 E-value=9.6e-16 Score=116.62 Aligned_cols=160 Identities=16% Similarity=0.080 Sum_probs=115.4
Q ss_pred cccceeeee----eeecCCCcceeEEEECCCCCCcEEE-EEeCCCc--EEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLA-TCAADGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..+++|++. ..+..|...+.+++|+|+ |+.|+ +++.|+. |++||+.+++.. .+ ......+.+++|
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~~~~-~l-----~~~~~~~~~~~~ 274 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQIR-QV-----TDGRSNNTEPTW 274 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEE-EC-----CCCSSCEEEEEE
T ss_pred cEEEEEECCCCcEEEeecCCCcccCEEEcCC--CCEEEEEEecCCCceEEEEECCCCCEE-eC-----cCCCCcccceEE
Confidence 477888764 246678889999999999 88777 7776665 999999876431 11 112457899999
Q ss_pred ccCCCcccce--------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCC---CeEEEEEccCCcccceeee
Q psy13207 83 NHSFSRFNSI--------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSD---QNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 83 ~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~ 146 (197)
+|+++.++.+ +.+|+ ...+. .+...+..++|+++.-+|+.++.+ ..|.+||+.+ .+.
T Consensus 275 spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-----~~~- 347 (415)
T 2hqs_A 275 FPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-----GGV- 347 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSSCCEECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-----CCE-
T ss_pred CCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC-----CCE-
Confidence 9999987543 45556 33444 567788999999444333666654 5899999976 332
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCC---cEEEEEcCCC
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDG---CVRLWKLKKK 185 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg---~i~iw~~~~~ 185 (197)
..+..+. .+.+++|+|+|++|++++.++ .|++||+...
T Consensus 348 ~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 348 QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 3344454 789999999999999998877 7999998743
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-14 Score=112.55 Aligned_cols=170 Identities=7% Similarity=0.029 Sum_probs=121.3
Q ss_pred ccccccceeeee-----eeec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEc--CCcccccceeccceeccCCCee
Q psy13207 7 QSEKCLNQWTRR-----SNLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEA--PDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
..++++.+|+.. .++. ++. +.+++|+|+ |++|++++.|++|++||+ .+.+.+. .+.......
T Consensus 156 ~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spd--g~~l~v~~~d~~V~v~D~~~~t~~~~~------~i~~g~~p~ 225 (543)
T 1nir_A 156 RDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSAS--GRYLLVIGRDARIDMIDLWAKEPTKVA------EIKIGIEAR 225 (543)
T ss_dssp GGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTT--SCEEEEEETTSEEEEEETTSSSCEEEE------EEECCSEEE
T ss_pred cCCCeEEEEECCCceEEEEEecCcc--cceEEECCC--CCEEEEECCCCeEEEEECcCCCCcEEE------EEecCCCcc
Confidence 345678888643 3455 443 889999999 999999999999999999 6654332 333355679
Q ss_pred eEEEcc----CCCcccce------eEEEE------eeEeccc----------C-CCceeEEEEcC-CCeEEEEeeCCCeE
Q psy13207 79 CLTWNH----SFSRFNSI------SIMYE------AHSINAE----------H-KDLIHDVAYDY-YGLRMATCSSDQNI 130 (197)
Q Consensus 79 ~~~~~~----~~~~~~~~------~~~~~------~~~~~~~----------~-~~~i~~~~~~~-~~~~~~s~~~d~~i 130 (197)
.++|+| ++++++++ +.+|| +..+. . | ...+..+.+++ ...++++...++.|
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~-~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS-TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE-CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec-ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 999999 99987654 68898 33333 2 2 23688899983 33444788889999
Q ss_pred EEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcchhhh
Q psy13207 131 KVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~~~ 191 (197)
.+||..+.... .+..+ .+...+.++.|+|+|++|++++ .+++|.+||..+++....+
T Consensus 305 ~vvd~~~~~~l---~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 305 LLVNYKDIDNL---TVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp EEEECTTSSSC---EEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCcc---eeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 99999763211 11122 2455678899999999876655 6899999999987765544
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.62 E-value=5e-14 Score=101.21 Aligned_cols=167 Identities=14% Similarity=0.085 Sum_probs=115.2
Q ss_pred ccccceeeeee-e-----ecCC-CcceeEEEECCCCCCcEEEEEe--CCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 9 EKCLNQWTRRS-N-----LVDS-RTSVTDVKFGPKQLGLVLATCA--ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 9 ~~~~~~w~~~~-~-----~~~h-~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++.+.+|++.. . +..| ...+.+++|+|+ +++|++++ .++...||.+...... ...+.....+..
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~ 133 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD--GALYAISDKVEFGKSAIYLLPSTGGT-----PRLMTKNLPSYW 133 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT--SSEEEEEECTTTSSCEEEEEETTCCC-----CEECCSSSSEEE
T ss_pred CCeEEEEeCCCCCCceEeccccccccccceEECCC--CCEEEEEEeCCCCcceEEEEECCCCc-----eEEeecCCCccc
Confidence 45677777654 1 2344 467899999999 99999988 4456666665422111 112222345888
Q ss_pred EEEccCCCcccc-e-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceee
Q psy13207 80 LTWNHSFSRFNS-I-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 80 ~~~~~~~~~~~~-~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~ 145 (197)
++|+|+++.++. + +.+|+ ...+. .+...+.+++|+++.-.++.++ .++.+++|+++.. ...
T Consensus 134 ~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~----~~~ 208 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD----GSS 208 (297)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT----SSC
T ss_pred eEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECCC----CCC
Confidence 999999998763 2 47777 33444 5778899999994432225544 6899999998631 344
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCC-----------CcEEEEEcCCCcc
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDD-----------GCVRLWKLKKKRK 187 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----------g~i~iw~~~~~~~ 187 (197)
...+..|...+.+++|+|+|++|+.++.+ +.|.+||+.+++.
T Consensus 209 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 209 VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 56667778889999999999999988876 5699999987643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-14 Score=114.80 Aligned_cols=172 Identities=9% Similarity=0.016 Sum_probs=115.0
Q ss_pred ccccccceeeeee-----eecCCCc---ceeEEEECCCCCCcEEEEEeCC---------CcEEEEEcCCcccccceeccc
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRT---SVTDVKFGPKQLGLVLATCAAD---------GLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~---~v~~~~~~~~~~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~ 69 (197)
..++++++|+... .+..|.. .|.+++|+|+ |++|++++.+ +.+.+||+.+++. ..+. .
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpD--g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~--~ 108 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD--P 108 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC--C
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCC--CCEEEEEecCccceeecceeeEEEEECCCCce-Eecc--C
Confidence 3567889997642 3555554 4999999999 9999998764 7888999988753 1111 1
Q ss_pred eeccCCCeeeEEEccCCCcccce----eEEEE-----eeEecccCCCc------------------eeEEEEcCCCeEEE
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI----SIMYE-----AHSINAEHKDL------------------IHDVAYDYYGLRMA 122 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~------------------i~~~~~~~~~~~~~ 122 (197)
.......+..++|+|+|+.++.. +++|+ ...+...+... +.+++|+|+.-.|+
T Consensus 109 ~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la 188 (723)
T 1xfd_A 109 PEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188 (723)
T ss_dssp TTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred CccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE
Confidence 00113347899999999998754 78887 22222122322 27899995443336
Q ss_pred EeeCCC----------------------------------eEEEEEccCCcccceeeeeeecC------ceecEEEEEEc
Q psy13207 123 TCSSDQ----------------------------------NIKVTRDVMGTRFDIETIGNFED------HYCTVWRVSWN 162 (197)
Q Consensus 123 s~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~------h~~~v~~~~~~ 162 (197)
.++.|+ .|++||+.+ ......+.. +...+..++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-----PTHDLEMMPPDDPRMREYYITMVKWA 263 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-----SCCCEECCCCCCGGGSSEEEEEEEES
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-----CceeEEeeCCccCCCccceeEEEEEe
Confidence 665442 788999876 232233333 36788999999
Q ss_pred cCCCEEEEEeC----CCcEEEEEcCCCcch
Q psy13207 163 ITGTIVASSGD----DGCVRLWKLKKKRKK 188 (197)
Q Consensus 163 p~~~~l~~~~~----dg~i~iw~~~~~~~~ 188 (197)
|||+++++.+. +..|++||+.+++..
T Consensus 264 pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 264 TSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp SSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred CCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 99998877653 357999999876643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.9e-13 Score=98.79 Aligned_cols=170 Identities=12% Similarity=0.070 Sum_probs=113.7
Q ss_pred ccccccceeeee--e-----eecCCCcceeEEEECCCCCCcEEEEEeCC-CcEEEEEcC--CcccccceeccceeccCCC
Q psy13207 7 QSEKCLNQWTRR--S-----NLVDSRTSVTDVKFGPKQLGLVLATCAAD-GLVRIYEAP--DVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 7 ~~~~~~~~w~~~--~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-g~v~iw~~~--~~~~~~~~~~~~~~~~~~~ 76 (197)
..++.+++|++. . ....|...+.+++|+|+ +++|++++.+ +.|.+|++. +++. .....+.....
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~ 85 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGAL----TFAAESALPGS 85 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCE----EEEEEEECSSC
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCC--CCEEEEeecCCCeEEEEEecCCCCce----eeccccccCCC
Confidence 457888999773 1 12346778999999999 9888888876 999999997 3321 11222232347
Q ss_pred eeeEEEccCCCcccce------eEEEEe---eEec----ccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccc
Q psy13207 77 ASCLTWNHSFSRFNSI------SIMYEA---HSIN----AEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~------~~~~~~---~~~~----~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~ 142 (197)
+..++|+|++++++.+ +.+|++ .... ......+.+++|+++.-.+++++ .++.|.+||+.+...
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-- 163 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH-- 163 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC--
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc--
Confidence 8899999999976433 788885 2111 02334688899994432225555 899999999975111
Q ss_pred eeeee--eecC-ceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy13207 143 IETIG--NFED-HYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 143 ~~~~~--~~~~-h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~ 184 (197)
..... .+.. ....+.+++|+|++++++.++ .++.|.+|+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 11111 2222 234678899999999776555 889999999964
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.2e-13 Score=98.63 Aligned_cols=170 Identities=8% Similarity=0.006 Sum_probs=110.0
Q ss_pred ccccceeee---ee-----eecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCC-cccccceeccceeccCCCee
Q psy13207 9 EKCLNQWTR---RS-----NLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPD-VMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 9 ~~~~~~w~~---~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (197)
++.+.+|++ .. .+. ....+.++.|+|+ ++++++++ .++.|.+||+.+ ++................+.
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred CCeEEEEECCCCcccccccccc-CCCCceEEEECCC--CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 567888887 31 122 3346899999998 88777776 899999999986 33211000011112245678
Q ss_pred eEEEccCCCcccce------eEEEEeeE----------e---cccC--CCceeEEEEcCCC-eEEEEeeCCCeEEEEEcc
Q psy13207 79 CLTWNHSFSRFNSI------SIMYEAHS----------I---NAEH--KDLIHDVAYDYYG-LRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 79 ~~~~~~~~~~~~~~------~~~~~~~~----------~---~~~~--~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~ 136 (197)
.++|+|++++++.+ +.+|++.. + ...+ ...+..++|+++. .+++++..++.|.+||+.
T Consensus 182 ~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 89999999976332 78888311 1 1011 2345679999443 323466689999999997
Q ss_pred CCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 137 MGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
... .....+..+..+.. +.+++|+|+|++|++++ .++.|.+|+++
T Consensus 262 ~~~-~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 262 EDG-SVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTS-CCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCC-CceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 311 11344444444433 78899999999888887 68999999664
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.8e-12 Score=94.15 Aligned_cols=151 Identities=9% Similarity=-0.014 Sum_probs=101.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEee-
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEAH- 99 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~- 99 (197)
.+.++.|+|+ |+++++...++.|.+|++.....+.... ............++|+|++++++.+ +.+|++.
T Consensus 142 ~~~~~~~spd--g~l~v~~~~~~~v~~~~~~~~g~~~~~~-~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 142 HIHYTDLTPD--NRLAVIDLGSDKVYVYNVSDAGQLSEQS-VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CEEEEEECTT--SCEEEEETTTTEEEEEEECTTSCEEEEE-EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEECCC--CcEEEEeCCCCEEEEEEECCCCcEEEee-eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 4888999999 8877777788999999998322211111 0111124467789999999965442 6788722
Q ss_pred ---------EecccCC------CceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 100 ---------SINAEHK------DLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 100 ---------~~~~~~~------~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
.+. ... ..+..++|+++.- ++++...++.|.+|++... -....+..+..+...+..++|+|
T Consensus 219 ~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 219 QTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp TTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEEEEEEECSSSCCCEEEECT
T ss_pred CCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEEeEEEecCCCCcCeEEECC
Confidence 122 111 3578899995443 2356667899999998631 01345555555566678999999
Q ss_pred CCCEEEEEeC-CCcEEEEEcC
Q psy13207 164 TGTIVASSGD-DGCVRLWKLK 183 (197)
Q Consensus 164 ~~~~l~~~~~-dg~i~iw~~~ 183 (197)
+|++|++++. ++.|.+|+++
T Consensus 296 dg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEEcCCCcEEEEEEe
Confidence 9998888875 4899999654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.6e-13 Score=109.08 Aligned_cols=142 Identities=13% Similarity=0.056 Sum_probs=98.6
Q ss_pred CcceeEEEECCCCCCcEEEEEeC-CC-----cEEEEEcCCcccccceecccee-------------------ccCCCeee
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAA-DG-----LVRIYEAPDVMNLSQWCLQHEV-------------------ACPTLASC 79 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~-dg-----~v~iw~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 79 (197)
...+.+++|+|+ |++|++++. |+ .|++||+.+++........... .+...+.+
T Consensus 36 ~~~~~~~~~Spd--G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPD--GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTT--SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecC--CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 457999999999 999999998 88 9999999887643322211000 00023789
Q ss_pred EEEccCCCcccce----eEEEEeeE--------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 80 LTWNHSFSRFNSI----SIMYEAHS--------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
++|+|++++++.+ +.+|++.. +. .|...+..++|+|+.-+|+.++ ++.|++||+.+ .....
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~-----g~~~~ 186 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS-----GRQMQ 186 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT-----TEEEE
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCCEEEEEe-CCcEEEEecCC-----CCEEE
Confidence 9999999988754 78898332 22 4667899999995443337665 56899999976 33332
Q ss_pred eecCceec----------------EEEEEEccCCCEEEEEeCCC
Q psy13207 148 NFEDHYCT----------------VWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 148 ~~~~h~~~----------------v~~~~~~p~~~~l~~~~~dg 175 (197)
....+... +..++|+|||++|++++.|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 22222221 47799999999999998776
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.52 E-value=7.8e-13 Score=96.93 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=103.9
Q ss_pred ceeEEEECCCCCCcEEEEEe------------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 27 SVTDVKFGPKQLGLVLATCA------------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+.++.|+|+ |++|++++ .++.|.+||+.+++....+ .....+.+++|+|++++++.+
T Consensus 83 ~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~ 154 (337)
T 1pby_B 83 SLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF------EAPRQITMLAWARDGSKLYGLGR 154 (337)
T ss_dssp CTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE------ECCSSCCCEEECTTSSCEEEESS
T ss_pred cccceEECCC--CCEEEEEecccccccccccccCceEEEEECCCCcEEEEE------eCCCCcceeEECCCCCEEEEeCC
Confidence 6788999998 88888876 5799999999876543322 224457788899999876543
Q ss_pred -eEEEE------eeEecc--------------------------------------------------------------
Q psy13207 93 -SIMYE------AHSINA-------------------------------------------------------------- 103 (197)
Q Consensus 93 -~~~~~------~~~~~~-------------------------------------------------------------- 103 (197)
+.+|+ +..+..
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 67777 111110
Q ss_pred ---cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 104 ---EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 104 ---~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
.+...+.+++|+++.-+++++ ++.|.+||+.+ .+.+..+.. ...+.+++|+|+|++|++++.++.|.+|
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-----NASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-----TEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC-----CcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 011223457888443222555 78999999976 444444433 2456889999999999999999999999
Q ss_pred EcCCCcchhhhh
Q psy13207 181 KLKKKRKKKKEE 192 (197)
Q Consensus 181 ~~~~~~~~~~~~ 192 (197)
|+.+++....++
T Consensus 307 d~~~~~~~~~~~ 318 (337)
T 1pby_B 307 DAETLEKKGQVD 318 (337)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECcCCcEEEEEE
Confidence 999877655443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=7.3e-13 Score=97.85 Aligned_cols=172 Identities=8% Similarity=0.003 Sum_probs=116.3
Q ss_pred ccccceeeee-----eeecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceec--c--CCCee
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVA--C--PTLAS 78 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~--~--~~~~~ 78 (197)
++.+..|+.. ..+. ....+..+.|+|+ |+ .+++...++.|.+||..+++.+..+....... . ...+.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIH-NDLKPFGATINNT--TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR 144 (353)
T ss_dssp SEEEEEECTTTCCEEEEEE-ESSCCCSEEEETT--TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE
T ss_pred CccEEEEcCCCCeEEEEEe-cCCCcceEEECCC--CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc
Confidence 5677777643 1222 2345788999998 77 45566678999999999887654443321110 0 12368
Q ss_pred eEEEccCCCcccce-------eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 79 CLTWNHSFSRFNSI-------SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-------~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
++.|+|+++.++.+ +.+|| +..+. .+...+.+++|+++.-.+++++.++.|.+||..+ .+.
T Consensus 145 ~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-----~~~ 218 (353)
T 3vgz_A 145 ELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-----NKI 218 (353)
T ss_dssp EEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-----TEE
T ss_pred eEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-----CeE
Confidence 89999999875432 67888 33443 3556688899984332237888899999999976 344
Q ss_pred eeeec----CceecEEEEEEccCCCEEEEEeC-CCcEEEEEcCCCcchh
Q psy13207 146 IGNFE----DHYCTVWRVSWNITGTIVASSGD-DGCVRLWKLKKKRKKK 189 (197)
Q Consensus 146 ~~~~~----~h~~~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~~~~~~~ 189 (197)
...+. ++...+..++|+|+|++++.++. ++.|.+||..+++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 43333 24556889999999997777664 5999999998876543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=111.87 Aligned_cols=174 Identities=9% Similarity=0.099 Sum_probs=112.4
Q ss_pred cccccceeeeee-----eecCCCc---ceeEEEECCCCCCcEEEEEeC---------CCcEEEEEcCCcccccceeccce
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRT---SVTDVKFGPKQLGLVLATCAA---------DGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~---~v~~~~~~~~~~~~~l~s~~~---------dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
.++++++|+... .+.+|.. .+.+++|+|+ |++|++++. ++.|++||+.+++.+....+
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpD--g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--- 108 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPD--RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--- 108 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCC--CCeEEEEecCceeEEeecceEEEEEECCCCccccceec---
Confidence 467888998642 2333333 3899999999 999998876 78999999988764211111
Q ss_pred eccCCCeeeEEEccCCCcccce----eEEEEe-----eEec-ccCCCce-----------------eEEEEcCCCeEEEE
Q psy13207 71 VACPTLASCLTWNHSFSRFNSI----SIMYEA-----HSIN-AEHKDLI-----------------HDVAYDYYGLRMAT 123 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~-~~~~~~i-----------------~~~~~~~~~~~~~s 123 (197)
...+..++|+|+|+.++.+ +++|++ ..+. .++...+ .+++|+|+.-.|+.
T Consensus 109 ---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 109 ---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp ---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred ---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 2467889999999998765 788882 1111 1222222 48999955433377
Q ss_pred eeCCC----------------------------------eEEEEEccCCcccceeee---eeecCceecEEEEEEccCCC
Q psy13207 124 CSSDQ----------------------------------NIKVTRDVMGTRFDIETI---GNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 124 ~~~d~----------------------------------~i~~~d~~~~~~~~~~~~---~~~~~h~~~v~~~~~~p~~~ 166 (197)
++.|. .|++||+.+........+ ..+.+|...+..++|+||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 66542 788999875211000011 22446788899999999988
Q ss_pred EEEEEeCC----CcEEEEE----cCCCcchh
Q psy13207 167 IVASSGDD----GCVRLWK----LKKKRKKK 189 (197)
Q Consensus 167 ~l~~~~~d----g~i~iw~----~~~~~~~~ 189 (197)
++++.... ..|.+|| +.+++...
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 77775432 2488889 66654433
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.50 E-value=8e-12 Score=92.41 Aligned_cols=172 Identities=9% Similarity=0.021 Sum_probs=109.6
Q ss_pred ccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCcccccceeccceec--------
Q psy13207 9 EKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEVA-------- 72 (197)
Q Consensus 9 ~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~~-------- 72 (197)
++.+..|++.. .+..+...+..++|+|+ |++|++++ .++.+.+|++............ ...
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~p~~~~ 138 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTV-QHSGHGPRPEQ 138 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEE-ECCCCCSSTTC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeeccee-ecCCCCCCccc
Confidence 56788887641 23346678899999999 98888777 7899999999643222111100 000
Q ss_pred cCCCeeeEEEccCCCcccce-----eEEEEee---------EecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccC
Q psy13207 73 CPTLASCLTWNHSFSRFNSI-----SIMYEAH---------SINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~ 137 (197)
....+.+++|+|+++.+++. +.+|++. .+..........++|+++.- +++++..++.|.+|++..
T Consensus 139 ~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 139 DGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 12347889999999944432 7888833 11101234677899994432 235566789999999864
Q ss_pred CcccceeeeeeecCce------ecEEEEEEccCCCEE-EEEeCCCcEEEEEcCC
Q psy13207 138 GTRFDIETIGNFEDHY------CTVWRVSWNITGTIV-ASSGDDGCVRLWKLKK 184 (197)
Q Consensus 138 ~~~~~~~~~~~~~~h~------~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~ 184 (197)
.... ...+..+.... ..+..++|+|||++| ++...++.|.+|++..
T Consensus 219 ~~g~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 219 QTGA-FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp TTTE-EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred CCCc-eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 1100 12222222221 458899999999987 4556789999999974
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-12 Score=94.62 Aligned_cols=167 Identities=11% Similarity=0.020 Sum_probs=111.8
Q ss_pred ccccceeee------eeeecCCCcceeEEEECCCCCCcEEEEEeCCC---cEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 9 EKCLNQWTR------RSNLVDSRTSVTDVKFGPKQLGLVLATCAADG---LVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 9 ~~~~~~w~~------~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++.+..|+. ...+..+..+..++.|+|+ |++++++..++ .|.+||+.+++.+.. +.......+
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d~~~~~~~~~------~~~~~~~~~ 132 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYSFLKNKFIST------IPIPYDAVG 132 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEETTTTEEEEE------EECCTTEEE
T ss_pred CCeEEEEECCCCceeEEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEECCCCCeEEE------EECCCCccc
Confidence 446666654 2334456666666999999 98888655553 899999988765432 223456689
Q ss_pred EEEccCCCcccce-------eEEEEee----------EecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCccc
Q psy13207 80 LTWNHSFSRFNSI-------SIMYEAH----------SINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 80 ~~~~~~~~~~~~~-------~~~~~~~----------~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
++|+|++++++.+ +.+|++. ... ........++|+++.- +++++..++.|.+||+.+...
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~- 210 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN- 210 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-
Confidence 9999999876432 6777721 111 2345678999994432 235666789999999976321
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcc
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRK 187 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~ 187 (197)
...+..+.. ...+..++|+|+|++++.++ .++.|.+||+.+++.
T Consensus 211 -~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 211 -ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp -CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred -cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 111444443 35568899999999776654 578899999987654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-11 Score=90.31 Aligned_cols=169 Identities=7% Similarity=-0.070 Sum_probs=109.9
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCccc-ccceeccceecc-CCCee
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMN-LSQWCLQHEVAC-PTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~-~~~~~~~~~~~~-~~~~~ 78 (197)
..++.+.+|+.. ..+..+...+ +++|+|+ |+++++++ .++.|.+||+.+++. .. .+.. ..+..
T Consensus 17 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~~~~------~~~~~~~~~~ 87 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEILNQITLGYDFV-DTAITSD--CSNVVVTSDFCQTLVQIETQLEPPKVV------AIQEGQSSMA 87 (331)
T ss_dssp GGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSS--SCEEEEEESTTCEEEEEECSSSSCEEE------EEEECSSCCC
T ss_pred cCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCC--CCEEEEEeCCCCeEEEEECCCCceeEE------ecccCCCCcc
Confidence 456778888753 2344455566 9999999 87665555 489999999988754 22 1222 33444
Q ss_pred eEEEccCCCcccc--------eeEEEE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCe-EEEEEccCCcccc
Q psy13207 79 CLTWNHSFSRFNS--------ISIMYE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQN-IKVTRDVMGTRFD 142 (197)
Q Consensus 79 ~~~~~~~~~~~~~--------~~~~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~-i~~~d~~~~~~~~ 142 (197)
+++|+|+++++++ .+.+|+ +..+. ......+++|+++. .++++...++. |.+|++.......
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 4999999998642 478888 33333 34557899999442 22355556678 9999986421110
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCcc
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASS-GDDGCVRLWKLKKKRK 187 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~~~ 187 (197)
......+ ........++|+|+|++++.+ ..++.|.+||+.+++.
T Consensus 166 ~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 166 DTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 1101222 233457899999999966554 4689999999987665
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-11 Score=92.23 Aligned_cols=153 Identities=10% Similarity=0.053 Sum_probs=97.8
Q ss_pred ceeEEEECCCCCCcEEEE-EeCCCcEEEEEcCCccc------ccce--eccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 27 SVTDVKFGPKQLGLVLAT-CAADGLVRIYEAPDVMN------LSQW--CLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s-~~~dg~v~iw~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
.+.++.|+|+ |++|+. ...++.|.+|++..... +... ..............++|+|++++++..
T Consensus 156 ~~~~~~~spd--g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 156 HLHCVRITPD--GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp CEEEEEECTT--SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred cceEEEECCC--CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 3578999999 876554 44589999999875432 1110 011122235567899999999976433
Q ss_pred -eEEEEee--------Eec--ccCCCceeEEEEcCCCeEEEEeeC--CCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 -SIMYEAH--------SIN--AEHKDLIHDVAYDYYGLRMATCSS--DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 -~~~~~~~--------~~~--~~~~~~i~~~~~~~~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+.+|++. .+. ..+......++|+++.-+|++++. ++.|.+|++.... .....+..+.. ...+.++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-g~~~~~~~~~~-g~~~~~~ 311 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-GTLTKVGYQLT-GIHPRNF 311 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT-CCEEEEEEEEC-SSCCCEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC-CcEEEeeEecC-CCCCceE
Confidence 7888822 121 123345679999944433355554 5899999986211 01223333433 4467889
Q ss_pred EEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 160 SWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 160 ~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
+|+|+|++|++++ .++.|.+|+++
T Consensus 312 ~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 312 IITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999999888887 67899997665
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-12 Score=96.17 Aligned_cols=149 Identities=8% Similarity=-0.011 Sum_probs=108.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeC-------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAA-------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ 91 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~-------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 91 (197)
...+..++|+|+ ++.+++++. ++.|.+||..+++....+. ....+..++|+|+++.++.
T Consensus 40 ~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQ--ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH------NDLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETT--TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE------ESSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCC--CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe------cCCCcceEEECCCCCEEEEEecCCC
Confidence 346788999998 877777763 5689999998876544332 2345788999999986533
Q ss_pred eeEEEE------eeEecccCCC---------ceeEEEEcC--CCeEEEEe--eCCCeEEEEEccCCcccceeeeeeecCc
Q psy13207 92 ISIMYE------AHSINAEHKD---------LIHDVAYDY--YGLRMATC--SSDQNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 92 ~~~~~~------~~~~~~~~~~---------~i~~~~~~~--~~~~~~s~--~~d~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
.+.+|| +..+. .+.. .+.+++|++ +.+ +.+ +.++.|.+||.++ .+....+..+
T Consensus 112 ~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l--~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~ 183 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLV-LDDRKRTEEVRPLQPRELVADDATNTV--YISGIGKESVIWVVDGGN-----IKLKTAIQNT 183 (353)
T ss_dssp EEEEEETTTCCEEEEEE-SCCCCCCSSCCCCEEEEEEEETTTTEE--EEEEESSSCEEEEEETTT-----TEEEEEECCC
T ss_pred EEEEEeCCCCeeEEEEe-cCCCccccccCCCCCceEEECCCCCEE--EEEecCCCceEEEEcCCC-----CceEEEecCC
Confidence 278888 34444 2221 268899983 434 443 3588999999976 5556666545
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
...+.+++|+|+|+++++++.++.|.+||..+++...
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 5567889999999999999999999999998876543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4e-13 Score=108.31 Aligned_cols=175 Identities=11% Similarity=0.111 Sum_probs=112.8
Q ss_pred ccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-----cccccceeccce-e-------
Q psy13207 9 EKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-----VMNLSQWCLQHE-V------- 71 (197)
Q Consensus 9 ~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-----~~~~~~~~~~~~-~------- 71 (197)
++.+++|++. ..+..+...+.+++|+|+ |+.|+++ .|+.|++|++.+ ++.......... +
T Consensus 100 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~Spd--G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLFDTNEETASLDFSPV--GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp TTEEEEEETTTTEEEEEECCTTCCTTCEECTT--SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred CCEEEEEECCCCceEEccCCcccccCCcCCCC--CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 3667777753 234567778999999999 9999885 689999999987 543221110000 0
Q ss_pred -ccCCCeeeEEEccCCCcccce--------------------------------------eEEEE-----eeEec--ccC
Q psy13207 72 -ACPTLASCLTWNHSFSRFNSI--------------------------------------SIMYE-----AHSIN--AEH 105 (197)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~-----~~~~~--~~~ 105 (197)
+....+.++.|+|++++|+.+ +.+|| ...+. ..|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 001125899999999987543 56777 11221 135
Q ss_pred CCceeEEEEcCCCeEEEEeeCCC-----eEEEEEccCCcccceeeeeeecCce---ecEEEEEEcc--CCCEEEEEeCCC
Q psy13207 106 KDLIHDVAYDYYGLRMATCSSDQ-----NIKVTRDVMGTRFDIETIGNFEDHY---CTVWRVSWNI--TGTIVASSGDDG 175 (197)
Q Consensus 106 ~~~i~~~~~~~~~~~~~s~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p--~~~~l~~~~~dg 175 (197)
...+..++|+++.-.|++++.++ .|.+||..++.. ...+.. ..+. ..+.+++|+| ||+++++++.|+
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~--~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF--VRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE--EEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce--eeEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 67789999995443337766664 899999976311 111111 1111 1246789999 999999999999
Q ss_pred cEEEEEcC-CCcchh
Q psy13207 176 CVRLWKLK-KKRKKK 189 (197)
Q Consensus 176 ~i~iw~~~-~~~~~~ 189 (197)
.+++|.++ .++...
T Consensus 334 ~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIR 348 (706)
T ss_dssp SCEEEEEETTSCEEE
T ss_pred ccEEEEEECCCCEEE
Confidence 99999886 344333
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=6.1e-13 Score=111.73 Aligned_cols=147 Identities=11% Similarity=0.018 Sum_probs=112.5
Q ss_pred CCcceeEEEEC-CCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC-CeeeEEEccCCCcccce-----eE-E
Q psy13207 24 SRTSVTDVKFG-PKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT-LASCLTWNHSFSRFNSI-----SI-M 95 (197)
Q Consensus 24 h~~~v~~~~~~-~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~-~ 95 (197)
|...+.++.|+ |+ |+.|++++ ++.+.+|++..+.... + ..... .+..++|+ +++.++.. +. +
T Consensus 294 ~~~~v~~~~~S~pd--G~~la~~~-~~~i~~~~~~~~~~~~-~-----~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~ 363 (1045)
T 1k32_A 294 SIPSKFAEDFSPLD--GDLIAFVS-RGQAFIQDVSGTYVLK-V-----PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGI 363 (1045)
T ss_dssp ECGGGGEEEEEECG--GGCEEEEE-TTEEEEECTTSSBEEE-C-----SCCSCEEEEEECSS-SEEEEEEEETTEEEEEE
T ss_pred cccccceeeecCCC--CCEEEEEE-cCEEEEEcCCCCceEE-c-----cCCCcceEEeeeEc-CCCeEEEEECCCceEEE
Confidence 34479999999 99 99898887 7899999987654221 1 11233 67889999 88877653 45 5
Q ss_pred EE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 96 YE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 96 ~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
|+ ...+. .|...+..++|+|+.-+|++++.++.|++||+.+ ++......+|...+.+++|+|||++|++
T Consensus 364 ~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-----g~~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 364 YDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-----GKPTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred EECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCC-----CceEEeccCCCCCccceEECCCCCeEEE
Confidence 66 44555 6778899999995544449999999999999976 4555555578888999999999999998
Q ss_pred EeCCC----------cEEEEEcCCCc
Q psy13207 171 SGDDG----------CVRLWKLKKKR 186 (197)
Q Consensus 171 ~~~dg----------~i~iw~~~~~~ 186 (197)
++.++ .|++||+.+++
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred EecCccccccCCCCCeEEEEECCCCc
Confidence 87654 89999998754
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-12 Score=95.95 Aligned_cols=151 Identities=9% Similarity=0.018 Sum_probs=102.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCC------------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 27 SVTDVKFGPKQLGLVLATCAAD------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~d------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+.++.|+|+ |++|++++.+ +.|.+||+.+++..... ........+.+++|+|+++.++.+
T Consensus 93 ~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~l~~~~~~ 167 (349)
T 1jmx_B 93 SMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV---RTFPMPRQVYLMRAADDGSLYVAGPD 167 (349)
T ss_dssp CSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS---EEEECCSSCCCEEECTTSCEEEESSS
T ss_pred cccceEECCC--CCEEEEEcccccccccccccCCCeEEEEECCCcccccee---eeccCCCcccceeECCCCcEEEccCc
Confidence 3789999999 9888888865 99999999875433221 222234468899999999844322
Q ss_pred eEEEE------eeEecccCC------------------------------------------------------------
Q psy13207 93 SIMYE------AHSINAEHK------------------------------------------------------------ 106 (197)
Q Consensus 93 ~~~~~------~~~~~~~~~------------------------------------------------------------ 106 (197)
+.+|| +..+. .+.
T Consensus 168 i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALP-LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp EEEECTTTCCEEEEEC-STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred EEEEeCCCCceecccc-ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE
Confidence 67777 22222 111
Q ss_pred --------CceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 107 --------DLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 107 --------~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
..+..++|++ +.-+++++ ++.|.+||+++ .+.+..+.. ...+.+++|+|+|++|++++.++.|
T Consensus 247 ~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 247 TQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ-----RKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp EEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT-----TEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEE
T ss_pred ecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc-----CeEEEEEcC-CCCccceEECCCCCEEEEecCCCeE
Confidence 1233445555 44333555 88999999976 444444432 2346789999999989888889999
Q ss_pred EEEEcCCCcchhhh
Q psy13207 178 RLWKLKKKRKKKKE 191 (197)
Q Consensus 178 ~iw~~~~~~~~~~~ 191 (197)
.+||+.+.+....+
T Consensus 319 ~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 319 AVFNPDTLEKVKNI 332 (349)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeccccceeeee
Confidence 99999887665544
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=111.76 Aligned_cols=139 Identities=12% Similarity=0.030 Sum_probs=92.0
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------------
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------------- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 92 (197)
..+.+++|+|+ |+++++ +.||+|++||+.+++....+.. ... ....+.+++|+|+|++++.+
T Consensus 17 ~~~~~~~~spd--g~~~~~-~~dg~i~~~d~~~g~~~~~~~~-~~~-~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISD--TEFIYR-EQKGTVRLWNVETNTSTVLIEG-KKI-ESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSS--SCBCCC-CSSSCEEEBCGGGCCCEEEECT-TTT-TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCC--CcEEEE-eCCCCEEEEECCCCcEEEEecc-ccc-cccccceEEECCCCCEEEEEecCccceeeccee
Confidence 34788999999 887766 7899999999988754322211 000 01248999999999987644
Q ss_pred -eEEEE-----eeEec--ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee----------
Q psy13207 93 -SIMYE-----AHSIN--AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC---------- 154 (197)
Q Consensus 93 -~~~~~-----~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~---------- 154 (197)
+.+|+ ...+. ..|...+..++|+|+.-.|+.++. +.|++||..+ ++.......+..
T Consensus 92 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~-----g~~~~~~~~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG-----KQAIRVVSTGKEGVIYNGLSDW 165 (723)
T ss_dssp EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-----SCCEEEECCCBTTTEEEEECCH
T ss_pred eEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-----CceEEEecCCCCCceECcccce
Confidence 45898 22232 133445888999944322277665 7999999976 233332332222
Q ss_pred --------cEEEEEEccCCCEEEEEeCCC
Q psy13207 155 --------TVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 155 --------~v~~~~~~p~~~~l~~~~~dg 175 (197)
.+.+++|+|||++|++++.|+
T Consensus 166 v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred eEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 237899999999999988653
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=8.4e-12 Score=98.03 Aligned_cols=166 Identities=11% Similarity=0.055 Sum_probs=113.5
Q ss_pred cccccceeee--e-----eeecCCCcceeEEEECC----CCCCcEEEEEe-CCCcEEEEEcCCcccccceeccce-----
Q psy13207 8 SEKCLNQWTR--R-----SNLVDSRTSVTDVKFGP----KQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHE----- 70 (197)
Q Consensus 8 ~~~~~~~w~~--~-----~~~~~h~~~v~~~~~~~----~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~----- 70 (197)
.++.+++|++ . .++. +...+..++|+| + |++|++++ .+++|.+||..+.+.+..+.....
T Consensus 198 ~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~ 274 (543)
T 1nir_A 198 RDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQ 274 (543)
T ss_dssp TTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSC
T ss_pred CCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEEeccccccceeecccCcccCcc
Confidence 3478888887 2 2344 445679999999 9 99998887 489999999988876655443110
Q ss_pred -eccCCCeeeEEEccCCCcccce------eEEEEe------e--EecccCCCceeEEEEcCCCeE-EEEeeCCCeEEEEE
Q psy13207 71 -VACPTLASCLTWNHSFSRFNSI------SIMYEA------H--SINAEHKDLIHDVAYDYYGLR-MATCSSDQNIKVTR 134 (197)
Q Consensus 71 -~~~~~~~~~~~~~~~~~~~~~~------~~~~~~------~--~~~~~~~~~i~~~~~~~~~~~-~~s~~~d~~i~~~d 134 (197)
+.....+..+.++|++..+..+ +.+||. . .+ .+...+..+.|+++.-+ ++++..++.|.+||
T Consensus 275 ~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 275 TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 0113378899999988775433 678882 1 22 35667888999944332 24555689999999
Q ss_pred ccCCcccceeeeeeecC----ceecEEEEEEccC-CCEEEEEe-CCCcEEEEEcCC
Q psy13207 135 DVMGTRFDIETIGNFED----HYCTVWRVSWNIT-GTIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~----h~~~v~~~~~~p~-~~~l~~~~-~dg~i~iw~~~~ 184 (197)
..+ ++++..+.. |......+ ++|+ +.+++++. .|++|.+||+.+
T Consensus 353 ~~t-----g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 353 SKD-----RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTT-----TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCC-----CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 987 455555543 54433333 4777 66677775 589999999987
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-10 Score=86.94 Aligned_cols=171 Identities=9% Similarity=0.022 Sum_probs=105.1
Q ss_pred ccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCcccccceeccceecc-----
Q psy13207 9 EKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEVAC----- 73 (197)
Q Consensus 9 ~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~----- 73 (197)
++.+..|++.. ....+......+++ + +++|++++ .++.+.+|++.....+..........+
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d--g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~ 149 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N--GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDK 149 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C--SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C--CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCc
Confidence 46777776542 12234455677777 5 66666655 688999999976543322211111111
Q ss_pred ----CCCeeeEEEccCCCcccce------eEEEEee------------------EecccCCCceeEEEEcCCCeEEEEee
Q psy13207 74 ----PTLASCLTWNHSFSRFNSI------SIMYEAH------------------SINAEHKDLIHDVAYDYYGLRMATCS 125 (197)
Q Consensus 74 ----~~~~~~~~~~~~~~~~~~~------~~~~~~~------------------~~~~~~~~~i~~~~~~~~~~~~~s~~ 125 (197)
...+.+++|+|++++++.+ +.+|++. .....+......++|+++.-++++++
T Consensus 150 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 150 ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 2345789999999976433 6888732 11112345678999995442225555
Q ss_pred -CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC--CCcEEEEEcC
Q psy13207 126 -SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD--DGCVRLWKLK 183 (197)
Q Consensus 126 -~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~--dg~i~iw~~~ 183 (197)
.++.|.+|++.++.......+.....+......++|+|||++|+++.. ++.|.+|++.
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 689999999975321111112223334455689999999999877665 4899999996
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.5e-12 Score=102.64 Aligned_cols=150 Identities=11% Similarity=0.066 Sum_probs=102.8
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc--cccceeccceeccCCCeeeEEEccCCCcccce----eEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM--NLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--- 97 (197)
.|.+++|+|+ |++|++++. +.|.+||+.++. ....+ ......+..++|+|+|++++.. +.+|+
T Consensus 110 ~v~~~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~~~~~~l-----~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPD--AQRLLFPLG-GELYLYDLKQEGKAAVRQL-----THGEGFATDAKLSPKGGFVSFIRGRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTT--SSEEEEEET-TEEEEEESSSCSTTSCCBC-----CCSSSCEEEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred CcceeEECCC--CCEEEEEeC-CcEEEEECCCCCcceEEEc-----ccCCcccccccCCCCCCEEEEEeCCcEEEEecCC
Confidence 4899999999 999998886 999999998762 11111 1124678999999999988654 78888
Q ss_pred --eeEecccCCCc----------------eeEEEEcCCCeEEEEeeCCC-------------------------------
Q psy13207 98 --AHSINAEHKDL----------------IHDVAYDYYGLRMATCSSDQ------------------------------- 128 (197)
Q Consensus 98 --~~~~~~~~~~~----------------i~~~~~~~~~~~~~s~~~d~------------------------------- 128 (197)
...+...+... +..++|+|+.-+|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 22222122221 47799994432237776654
Q ss_pred --eEEEEEccC-CcccceeeeeeecCceecEEEEEEccCCCEEEEEeC-----CCcEEEEEcCCCcch
Q psy13207 129 --NIKVTRDVM-GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD-----DGCVRLWKLKKKRKK 188 (197)
Q Consensus 129 --~i~~~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-----dg~i~iw~~~~~~~~ 188 (197)
.|.+||+.+ ... ..+.....|...+..++| |||++|+.++. +..|++||+.+++..
T Consensus 262 ~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 262 QVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp EEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred eeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 778888864 321 111111247788999999 99999997764 567999999876543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.3e-12 Score=100.95 Aligned_cols=139 Identities=6% Similarity=-0.074 Sum_probs=98.9
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------eEEEE-
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---------SIMYE- 97 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~- 97 (197)
+....|+|++.+..+++++.|+ +.+||+.+++..... .... .++.|+|+|+.++.+ +++||
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~------~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELA------RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEE------EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred ceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEee------cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 4456777772234555555554 559999876432111 1111 789999999998732 57777
Q ss_pred ----eeEecccCCCceeEEEEcCCCeEEEEeeCCC--eEEEEEccCCcccceeeeeeecCceecEEEEE--------Ecc
Q psy13207 98 ----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS--------WNI 163 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~--------~~p 163 (197)
...+. .|...+..++|+|+.-.|+++..++ .|++||+.+ .+.. .+.+|...+..++ |+|
T Consensus 183 ~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 183 SSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD-----GSVE-DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp TTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT-----CCEE-ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred CCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC-----CcEE-EccCCCcChhhhhhccccceeEcC
Confidence 55666 7888899999995544448888888 899999976 3333 5566666666666 999
Q ss_pred CCCEEEEEeCCCcEEEEEc
Q psy13207 164 TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~ 182 (197)
||.++++++.|+++++|++
T Consensus 256 dg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TSCEEEEEEETTEEEEEET
T ss_pred CCcEEEEEEcCCcEEEEEE
Confidence 9999999999999999998
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=5.6e-11 Score=95.80 Aligned_cols=169 Identities=9% Similarity=0.056 Sum_probs=108.3
Q ss_pred cccccceeeeee----ee---cCCCcceeEEEECCCCCCcEEEEEeCCC-----cEEEEEcCCcccccceeccceeccCC
Q psy13207 8 SEKCLNQWTRRS----NL---VDSRTSVTDVKFGPKQLGLVLATCAADG-----LVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 8 ~~~~~~~w~~~~----~~---~~h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
.+..+.+|++.. .+ ..|...+.++.|+|+ |+.|++++.++ .|.+||+.+++...............
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD--ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT--SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC--CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 345677776532 12 256778999999999 99999888776 99999998873222111110000012
Q ss_pred CeeeEEEcc--CCCcccce-----eEEEE-------eeEecccCCCceeE-EEEcCCC-eEEEEeeCCC----eEEEEEc
Q psy13207 76 LASCLTWNH--SFSRFNSI-----SIMYE-------AHSINAEHKDLIHD-VAYDYYG-LRMATCSSDQ----NIKVTRD 135 (197)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~-~~~~~~~-~~~~s~~~d~----~i~~~d~ 135 (197)
.+..+.|+| ++++++++ ..+|. +..+. .+...+.. ++|+++. .++++++.++ .|..||.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 356789999 99877544 56776 34455 56666776 7999443 2224444444 5566666
Q ss_pred cCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC----CcEEEEEcCCCc
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD----GCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~iw~~~~~~ 186 (197)
.+ .. ...+. |...+.+++|+|||++++..+.+ +.+++||+.+++
T Consensus 390 ~~-----~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 390 KG-----GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TC-----CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CC-----CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 54 22 22232 56678999999999988876544 459999997754
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-11 Score=92.24 Aligned_cols=140 Identities=7% Similarity=0.001 Sum_probs=102.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc-----ceeccceeccCCCeeeEEEccCCCcccce----eEEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS-----QWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 97 (197)
+++.+++++. ..++++|+.+ .+++|++.+.+... .+......+... +..++| ++..|+.+ +.+|+
T Consensus 39 ~~nlLais~~--~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNS--KSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLD 112 (388)
T ss_dssp CCBCEEEETT--TTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEE
T ss_pred cccEEEEcCC--CCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEE
Confidence 6899999998 8889999987 55569986554110 022112223345 999999 88877654 89999
Q ss_pred ------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 98 ------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 ------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
..... .|...+.++.+.+..+ ++++.||.+.+||++. ..... +...|.|++|||+| ++.|
T Consensus 113 v~sl~~~~~~~-~~~~~v~~i~~~~p~~--av~~~dG~L~v~dl~~-----~~~~~----~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 113 LEELSEFRTVT-SFEKPVFQLKNVNNTL--VILNSVNDLSALDLRT-----KSTKQ----LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSSTTCEEEEE-ECSSCEEEEEECSSEE--EEEETTSEEEEEETTT-----CCEEE----EEESEEEEEECSSE--EEEE
T ss_pred chhhhccCccc-eeecceeeEEecCCCE--EEEECCCCEEEEEccC-----Ccccc----ccCCceEEEEcCCc--eEEE
Confidence 23333 5677788888873336 8999999999999975 22221 45689999999999 6788
Q ss_pred eCCCcEEEEEcCCCc
Q psy13207 172 GDDGCVRLWKLKKKR 186 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~ 186 (197)
..||++++|+.....
T Consensus 179 ~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 179 LKDRSFQSFAWRNGE 193 (388)
T ss_dssp ETTSCEEEEEEETTE
T ss_pred EcCCcEEEEcCCCcc
Confidence 999999999887655
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.9e-11 Score=101.66 Aligned_cols=148 Identities=7% Similarity=-0.123 Sum_probs=113.3
Q ss_pred ecCCCc-ceeEEEECCCCCCcEEEEEeCCCcEE-EEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 21 LVDSRT-SVTDVKFGPKQLGLVLATCAADGLVR-IYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 21 ~~~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
+..|.. .+..+.|+ + |+.|++++.++.+. +|++.+++... + ......+..++|+|+++.++.+ +
T Consensus 332 ~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~~~~~-l-----~~~~~~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTGKAEK-F-----EENLGNVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp CSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTCCEEE-C-----CCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCCCceE-e-----cCCccceeeeEECCCCCEEEEECCCCeE
Confidence 556777 89999999 8 99999999888888 88987654211 1 1224678999999999998754 7
Q ss_pred EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCC----------CeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSD----------QNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d----------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
++|+ ..... .|...+..++|+|+.-+|++++.+ +.|++||+.+ .+ ...+..|...+.
T Consensus 403 ~~~d~~tg~~~~~~~-~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~-----g~-~~~l~~~~~~~~ 475 (1045)
T 1k32_A 403 MTVDLETGKPTVIER-SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG-----RK-IFAATTENSHDY 475 (1045)
T ss_dssp EEEETTTCCEEEEEE-CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-----TE-EEECSCSSSBEE
T ss_pred EEEECCCCceEEecc-CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC-----Cc-EEEeeCCCcccC
Confidence 8999 23333 688889999999554333666654 4899999975 33 556777888889
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 158 RVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.++|+|||++|+.++.++...+|+...
T Consensus 476 ~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 476 APAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred CceEcCCCCEEEEEecccCCcCcchhc
Confidence 999999999999999988888887543
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-11 Score=88.65 Aligned_cols=135 Identities=7% Similarity=-0.021 Sum_probs=94.3
Q ss_pred cEEEEEeCCCcEEEEEcCCcccccceeccceeccCC---CeeeEEEccCCCcccce------eEEEE------eeEeccc
Q psy13207 40 LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT---LASCLTWNHSFSRFNSI------SIMYE------AHSINAE 104 (197)
Q Consensus 40 ~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~ 104 (197)
++|++++.++.|.+||+.+++.+..+. ... .+..++|+|+++.++.+ +.+|| +..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT------IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE------CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE------cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 478999999999999998876543332 122 47889999999865332 78888 2333311
Q ss_pred C----CCceeEEEEcCCCeEEEEee------------CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 105 H----KDLIHDVAYDYYGLRMATCS------------SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 105 ~----~~~i~~~~~~~~~~~~~s~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
+ ...+..++|+++.-++++++ .++.|.+||..+ .+.+..+.. ...+.+++|+|+|++|
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l 149 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-----LSRRKAFEA-PRQITMLAWARDGSKL 149 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-----TEEEEEEEC-CSSCCCEEECTTSSCE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-----CcEEEEEeC-CCCcceeEECCCCCEE
Confidence 1 22677899994432225554 579999999976 344444433 3456789999999988
Q ss_pred EEEeCCCcEEEEEcCCCcch
Q psy13207 169 ASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~~~~~ 188 (197)
+++ ++.|.+||+.+++..
T Consensus 150 ~~~--~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGTLV 167 (337)
T ss_dssp EEE--SSSEEEEETTTTEEE
T ss_pred EEe--CCeEEEEECCCCcEe
Confidence 887 689999999877654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-11 Score=98.26 Aligned_cols=138 Identities=9% Similarity=-0.002 Sum_probs=90.0
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCccccee----------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSIS---------- 93 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------- 93 (197)
......+.|+|+ |++++++ |++|++||+.+++....+.. +.... ......+.|+|++++++.+.
T Consensus 16 ~~~~~~~~w~~d--g~~~~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 16 RLKLYSLRWISD--HEYLYKQ--ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCCEEECSS--SEEEEEE--TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccccEECCC--CcEEEEc--CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 344678999999 9988886 99999999998864322211 11110 11234589999999876553
Q ss_pred ----EEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee-eecCceecE-------
Q psy13207 94 ----IMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG-NFEDHYCTV------- 156 (197)
Q Consensus 94 ----~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~~h~~~v------- 156 (197)
.+|| +..+. .+...+...+|+|+.-.|+.+ .|+.|++|+..++. ... ...++...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~-~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~-----~~~lt~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEE-RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLP-----SYRITWTGKEDIIYNGITDW 163 (740)
T ss_dssp EEEEEEEETTTTEECCSS-CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSC-----CEECCSCCBTTTEEESBCCH
T ss_pred ceEEEEEECCCCcEEEcc-cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCc-----eEEEcCCCCccceecCcccc
Confidence 4888 33444 567789999999443222666 57899999987632 111 112222222
Q ss_pred ----------EEEEEccCCCEEEEEeCC
Q psy13207 157 ----------WRVSWNITGTIVASSGDD 174 (197)
Q Consensus 157 ----------~~~~~~p~~~~l~~~~~d 174 (197)
..+.|||||++||.++.|
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEc
Confidence 348999999999988644
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.34 E-value=6.4e-11 Score=93.55 Aligned_cols=161 Identities=10% Similarity=-0.007 Sum_probs=108.8
Q ss_pred cccccceeeeee----eecCCC-cceeEEEECCCCCCcEEEEEeC---CCcEEEEEcCC--cccccceeccceeccCCCe
Q psy13207 8 SEKCLNQWTRRS----NLVDSR-TSVTDVKFGPKQLGLVLATCAA---DGLVRIYEAPD--VMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 8 ~~~~~~~w~~~~----~~~~h~-~~v~~~~~~~~~~~~~l~s~~~---dg~v~iw~~~~--~~~~~~~~~~~~~~~~~~~ 77 (197)
.++++++|.+.. .+..|. ..+..+.|+|+ +.+++++. +....||.+.. ..... .+......
T Consensus 42 ~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd---~~l~~~~~~~g~~~~~l~~~~~~~~g~~~------~l~~~~~~ 112 (582)
T 3o4h_A 42 SEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG---RVILVRDVSKGAEQHALFKVNTSRPGEEQ------RLEAVKPM 112 (582)
T ss_dssp ETTEEEEEEEETTEEEECCSSCCSEECEECTTCS---EEEEEEECSTTSCCEEEEEEETTSTTCCE------ECTTSCSB
T ss_pred cCCceeEEEEcCCCcEeeecccccccccccCCCC---eEEEEeccCCCCcceEEEEEeccCCCccc------cccCCCCc
Confidence 377889998742 355555 68999999985 46776664 55667766544 22111 11112344
Q ss_pred eeEEEccCCCcc--cce----eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC----CeEEEEEccCCcc
Q psy13207 78 SCLTWNHSFSRF--NSI----SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD----QNIKVTRDVMGTR 140 (197)
Q Consensus 78 ~~~~~~~~~~~~--~~~----~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d----~~i~~~d~~~~~~ 140 (197)
...+|+|+++.+ ++. ..+|+ ...+. .+.. .+++|+ ++.+ ++++.+ ..|++||+.+
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~--~~~~~spDG~~l--a~~~~~~~~~~~i~~~d~~~--- 184 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG--FGFVSDIRGDLI--AGLGFFGGGRVSLFTSNLSS--- 184 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS--CEEEEEEETTEE--EEEEEEETTEEEEEEEETTT---
T ss_pred eeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC--ceEEECCCCCEE--EEEEEcCCCCeEEEEEcCCC---
Confidence 567889988753 222 56888 22333 2222 788898 5555 877766 7899999875
Q ss_pred cceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCcch
Q psy13207 141 FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--CVRLWKLKKKRKK 188 (197)
Q Consensus 141 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~iw~~~~~~~~ 188 (197)
++ ...+..|...+..++|+|||++|+++..++ .|++||+.+++..
T Consensus 185 --g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 185 --GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp --CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred --CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 22 335667888899999999999999888888 8999999876543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-11 Score=90.25 Aligned_cols=149 Identities=7% Similarity=-0.025 Sum_probs=97.5
Q ss_pred EEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEE------
Q psy13207 30 DVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE------ 97 (197)
Q Consensus 30 ~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------ 97 (197)
.++++++ +.++++++.+++|.+||+.+++.+..+... ....+..++|+|+++.++.+ +.+|+
T Consensus 4 g~~~~~~--~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAG--HEYMIVTNYPNNLHVVDVASDTVYKSCVMP----DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTT--CEEEEEEETTTEEEEEETTTTEEEEEEECS----SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccCC--CEEEEEeCCCCeEEEEECCCCcEEEEEecC----CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 4557776 889999999999999999887654333221 11257889999999865322 78888
Q ss_pred eeEecccC-----CCceeEEEEcCCCeEEEEeeCC------------CeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 98 AHSINAEH-----KDLIHDVAYDYYGLRMATCSSD------------QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 98 ~~~~~~~~-----~~~i~~~~~~~~~~~~~s~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+..+...+ ...+..++|+++.-++++++.+ +.|.+||+.+... ...+..+.. ...+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~-~~~~~~~~ 154 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--AKPVRTFPM-PRQVYLMR 154 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--BCCSEEEEC-CSSCCCEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--cceeeeccC-CCccccee
Confidence 22333111 2237889999443333777654 8999999975211 112222222 33578899
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
|+|+|+ ++.++ +.|.+||+.+++....
T Consensus 155 ~s~dg~-l~~~~--~~i~~~d~~~~~~~~~ 181 (349)
T 1jmx_B 155 AADDGS-LYVAG--PDIYKMDVKTGKYTVA 181 (349)
T ss_dssp ECTTSC-EEEES--SSEEEECTTTCCEEEE
T ss_pred ECCCCc-EEEcc--CcEEEEeCCCCceecc
Confidence 999999 55554 3499999988765443
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.1e-11 Score=97.56 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=86.1
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------------eE
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------------SI 94 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 94 (197)
..+.|+|+ |+++++ +.|++|++||+.+++........ .. ....+.+++|+|+|++++.+ ++
T Consensus 19 ~~~~~s~d--g~~~~~-~~d~~i~~~~~~~g~~~~~~~~~-~~-~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWISG--QEYLHQ-SADNNIVLYNIETGQSYTILSNR-TM-KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESSS--SEEEEE-CTTSCEEEEESSSCCEEEEECHH-HH-HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECCC--CeEEEE-cCCCCEEEEEcCCCcEEEEEccc-cc-cccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 37899999 865555 46999999999887643222110 00 01248899999999987532 56
Q ss_pred EEEee--Ee---cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecE------------
Q psy13207 95 MYEAH--SI---NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTV------------ 156 (197)
Q Consensus 95 ~~~~~--~~---~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v------------ 156 (197)
+|++. .. . .....+..++|+|+.-.|+.+. ++.|++||+.++ ..... ..++...|
T Consensus 94 ~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g-----~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 94 IYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD-----PPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp EEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS-----CCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred EEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCC-----CcEEEecCCCcCCeEcccccceeeee
Confidence 77721 11 1 2235688899994432226664 789999999763 22111 12222222
Q ss_pred -----EEEEEccCCCEEEEEeCC
Q psy13207 157 -----WRVSWNITGTIVASSGDD 174 (197)
Q Consensus 157 -----~~~~~~p~~~~l~~~~~d 174 (197)
.+++|+|||++|++++.|
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccCcccEEECCCCCEEEEEEEC
Confidence 489999999999998865
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-09 Score=78.01 Aligned_cols=150 Identities=13% Similarity=0.119 Sum_probs=101.7
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 97 (197)
+...+.+++++|+ |+++++...++.|.+|+... +....+... .....+..++++++++.+++. +.+|+
T Consensus 119 ~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 119 ILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQNG-NVLHKFGCS---KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 192 (286)
T ss_dssp TCSCEEEEEECTT--SCEEEEETTTTEEEEECTTS-CEEEEEECT---TTCSSEEEEEECSSSEEEEEEGGGTEEEEEET
T ss_pred cCCCceEEEEeCC--CCEEEEECCCCEEEEEcCCC-CEEEEeCCC---CccCCcEEEEECCCCCEEEEECCCCEEEEEcC
Confidence 4456899999998 88888888889999999643 222222110 113457899999999876543 78888
Q ss_pred ----eeEecc-cCCCceeEEEEcCCCeEEEEeeCCC-eEEEEEccCCcccceeeeeeecCc--eecEEEEEEccCCCEEE
Q psy13207 98 ----AHSINA-EHKDLIHDVAYDYYGLRMATCSSDQ-NIKVTRDVMGTRFDIETIGNFEDH--YCTVWRVSWNITGTIVA 169 (197)
Q Consensus 98 ----~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~-~i~~~d~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~ 169 (197)
+..+.. ++...+..++++++.-++++...++ .|.+||.. ...+..+..+ ...+.+++++|+|++++
T Consensus 193 ~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~------g~~~~~~~~~~~~~~~~~i~~~~~g~l~v 266 (286)
T 1q7f_A 193 EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD------GQLISALESKVKHAQCFDVALMDDGSVVL 266 (286)
T ss_dssp TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT------SCEEEEEEESSCCSCEEEEEEETTTEEEE
T ss_pred CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC------CCEEEEEcccCCCCcceeEEECCCCcEEE
Confidence 344431 2235788999983332236666675 99999964 3334444333 23478999999998777
Q ss_pred EEeCCCcEEEEEcCCCc
Q psy13207 170 SSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~ 186 (197)
+ +.|++|++|++....
T Consensus 267 s-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 267 A-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp E-ETTTEEEEEECSCCC
T ss_pred E-CCCCeEEEEEccccc
Confidence 7 579999999986543
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=7.7e-10 Score=82.55 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=97.9
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC-CcccccceeccceeccCCCeeeEEEccCCCc--ccc----------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP-DVMNLSQWCLQHEVACPTLASCLTWNHSFSR--FNS---------- 91 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 91 (197)
...+..++|+|+ |++|++++.+ .|.+|++. +++..... ..........++|+|++++ +++
T Consensus 39 ~~~~~~~a~spd--g~~l~~~~~~-~v~~~~~~~~g~~~~~~----~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~ 111 (365)
T 1jof_A 39 DEPISWMTFDHE--RKNIYGAAMK-KWSSFAVKSPTEIVHEA----SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYA 111 (365)
T ss_dssp TCCCSEEEECTT--SSEEEEEEBT-EEEEEEEEETTEEEEEE----EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEE
T ss_pred CCCCcEEEECCC--CCEEEEEccc-eEEEEEECCCCCEEEee----EeecCCCCccEEECCCCCEEEEEEecCCcceecc
Confidence 346888999999 9999999888 99999986 55432111 1111123566889999984 311
Q ss_pred --------eeEEEEee-------Eecc---cCCCceeEEEEcCCCeEEEEee-CCCeEEEEEcc-CCcccceeeeeeec-
Q psy13207 92 --------ISIMYEAH-------SINA---EHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDV-MGTRFDIETIGNFE- 150 (197)
Q Consensus 92 --------~~~~~~~~-------~~~~---~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~-~~~~~~~~~~~~~~- 150 (197)
.+.+|++. .+.. .+...+.+++|+++.-++++++ .++.|++||+. +++ ...+..+.
T Consensus 112 ~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~---~~~~~~~~~ 188 (365)
T 1jof_A 112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE---VELVGSVDA 188 (365)
T ss_dssp EEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC---EEEEEEEEC
T ss_pred ceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC---EEEeeeEec
Confidence 26788721 1210 1456789999995442225554 46899999997 421 12222332
Q ss_pred -CceecEEEEEEccCCCEEEEEeC-CCcEEEEEcC
Q psy13207 151 -DHYCTVWRVSWNITGTIVASSGD-DGCVRLWKLK 183 (197)
Q Consensus 151 -~h~~~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~ 183 (197)
.|...+..++|+|+|+++++++. ++.|.+|+++
T Consensus 189 ~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 189 PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 23456899999999999988774 7899999875
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-09 Score=79.45 Aligned_cols=155 Identities=10% Similarity=0.077 Sum_probs=106.8
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC------------------------CcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD------------------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
.-+.+.+++++|+ |+++++...+ ++|.+||..+++.+..+.. ..-.....
T Consensus 22 ~l~~v~~va~d~~--G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----~~~~~p~g 95 (329)
T 3fvz_A 22 LPGQVSGVALDSK--NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK----NLFYLPHG 95 (329)
T ss_dssp CCSCEEEEEECTT--CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT----TTCSSEEE
T ss_pred ecCCceEEEECCC--CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC----CccCCceE
Confidence 3467999999998 9999888877 4799999887764322210 01246788
Q ss_pred EEEccCCCcccce-----eEEEE-------eeEec--------ccCCCceeEEEEcC-CCeEEEEee-CCCeEEEEEccC
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE-------AHSIN--------AEHKDLIHDVAYDY-YGLRMATCS-SDQNIKVTRDVM 137 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~-------~~~~~--------~~~~~~i~~~~~~~-~~~~~~s~~-~d~~i~~~d~~~ 137 (197)
++++++++.+++. +..|+ +..+. ..+......+++++ +..++++.+ .++.|++||..
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~- 174 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS- 174 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-
Confidence 9999999876543 67777 22221 13344678999985 444446665 68999999954
Q ss_pred Ccccceeeeeeec----------CceecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 138 GTRFDIETIGNFE----------DHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 138 ~~~~~~~~~~~~~----------~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+..+..+. ++......++++|+ ++++++...++.|++|+..+++....
T Consensus 175 -----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 175 -----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp -----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred -----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 33444432 23345789999998 78888888899999999986554433
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=9.7e-10 Score=81.99 Aligned_cols=168 Identities=11% Similarity=0.030 Sum_probs=106.7
Q ss_pred cccccceeeeee------eec----CCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcC-Ccccccceeccceec---
Q psy13207 8 SEKCLNQWTRRS------NLV----DSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAP-DVMNLSQWCLQHEVA--- 72 (197)
Q Consensus 8 ~~~~~~~w~~~~------~~~----~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~-~~~~~~~~~~~~~~~--- 72 (197)
.++++.+|++.. .+. .+...+.++.|+|+ |++|++++ .++.|.+|++. +++... ...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~~~~----~~~~~~~~ 190 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVEL----VGSVDAPD 190 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEE----EEEEECSS
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCCEEE----eeeEecCC
Confidence 466778887641 122 24567899999999 88777765 46899999998 553211 11121
Q ss_pred cCCCeeeEEEccCCCcccce------eEEEEee-----------Eecc------cCCC------ceeEEE-EcCCCeEEE
Q psy13207 73 CPTLASCLTWNHSFSRFNSI------SIMYEAH-----------SINA------EHKD------LIHDVA-YDYYGLRMA 122 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----------~~~~------~~~~------~i~~~~-~~~~~~~~~ 122 (197)
....+..++|+|++++++.+ +.+|++. .+.. +|.. .+..++ |+++.-+|+
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 14568899999999886432 6777521 1110 1121 578899 994432225
Q ss_pred EeeC-CC-----eEEEEEccCCcccceeeee---eecCceecEEEEEEcc---CCCEEEEEeCC-CcEEEEEcCCC
Q psy13207 123 TCSS-DQ-----NIKVTRDVMGTRFDIETIG---NFEDHYCTVWRVSWNI---TGTIVASSGDD-GCVRLWKLKKK 185 (197)
Q Consensus 123 s~~~-d~-----~i~~~d~~~~~~~~~~~~~---~~~~h~~~v~~~~~~p---~~~~l~~~~~d-g~i~iw~~~~~ 185 (197)
+++. ++ .|.+|++... ++... ....+...+..++|+| +|++|++++.+ +.|.+|+++..
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~----g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDC----GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTT----SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EECCCCCCCCCCeEEEEEECCC----CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 5443 23 8999998521 22221 1223344456789999 89999998864 89999998754
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.18 E-value=4.9e-10 Score=91.08 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=105.6
Q ss_pred ccccceeeee-----eeecCCCcc-----eeEEEECCCCCCcEEEEEeCC---------CcEEEEEcCCcccccceeccc
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTS-----VTDVKFGPKQLGLVLATCAAD---------GLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~-----v~~~~~~~~~~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~ 69 (197)
++++++|++. ..+.+|... ...+.|||+ |+.|+.++.+ +.+.+||+.+++... +
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l---- 107 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD--GQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-E---- 107 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-S----
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCC--CCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-c----
Confidence 6788899753 235555532 244789999 9999988876 566799999875331 1
Q ss_pred eeccCCCeeeEEEccCCCcccce----eEEEE-----eeEec-ccCCCce-----------------eEEEEcCCCeEEE
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI----SIMYE-----AHSIN-AEHKDLI-----------------HDVAYDYYGLRMA 122 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~-~~~~~~i-----------------~~~~~~~~~~~~~ 122 (197)
......+...+|+|+|+.++.. +++|+ ...+. .++...+ ..+.|+|+.-.|+
T Consensus 108 -~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la 186 (740)
T 4a5s_A 108 -ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLA 186 (740)
T ss_dssp -SCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEE
T ss_pred -ccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEE
Confidence 1124568999999999998755 67777 12221 0222212 3488995443336
Q ss_pred EeeCC-C-----------------------------------eEEEEEccC---Ccccceeeeeeec------CceecEE
Q psy13207 123 TCSSD-Q-----------------------------------NIKVTRDVM---GTRFDIETIGNFE------DHYCTVW 157 (197)
Q Consensus 123 s~~~d-~-----------------------------------~i~~~d~~~---~~~~~~~~~~~~~------~h~~~v~ 157 (197)
..+.| + .|++||+.+ +... ....+. +|...+.
T Consensus 187 ~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 187 YAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA---TSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC---CEEEECCCHHHHTSCEEEE
T ss_pred EEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc---eEEEecCCccCCCCCeEEE
Confidence 55422 1 466777754 3110 111222 3777899
Q ss_pred EEEEccCCCEEEEEeC----CCcEEEEEcCCCc
Q psy13207 158 RVSWNITGTIVASSGD----DGCVRLWKLKKKR 186 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~----dg~i~iw~~~~~~ 186 (197)
.++|+|||+.++.... +..|.+||+.+++
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 9999999996665532 3479999998866
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.9e-09 Score=79.63 Aligned_cols=152 Identities=7% Similarity=0.020 Sum_probs=97.2
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE--EEccCCCccc--------
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL--TWNHSFSRFN-------- 90 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------- 90 (197)
..++...+..+.|+|+ |+.|+.++.++.|++||+.+++....+... ...+... .++|++..++
T Consensus 76 t~~~~~~~~~~~~spd--g~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-----~~~~~~~~~~~~~dg~~l~~~~~~~~~ 148 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPD--DDALFYVKDGRNLMRVDLATLEENVVYQVP-----AEWVGYGTWVANSDCTKLVGIEIRRED 148 (388)
T ss_dssp CCSSCBCSSSCEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEECC-----TTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred eeCCCCCccceEEcCC--CCEEEEEeCCCeEEEEECCCCcceeeeech-----hhcccccceeECCCCCeeccccccCcc
Confidence 3455555667889999 999999999999999999887543222111 1122222 3367776654
Q ss_pred -------------------ceeEEEE-----eeEecccCCCceeEEEEcC-CCeEEEEeeCC------CeEEEEEccCCc
Q psy13207 91 -------------------SISIMYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSD------QNIKVTRDVMGT 139 (197)
Q Consensus 91 -------------------~~~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d------~~i~~~d~~~~~ 139 (197)
..+.+|+ ...+. .+...+..++|+| +.-+++.+..+ ..|.++|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-- 225 (388)
T 3pe7_A 149 WVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG-- 225 (388)
T ss_dssp CCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--
T ss_pred cccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--
Confidence 2366777 34444 4566788999997 65444555543 3677777654
Q ss_pred ccceeeeeeecCce--ecEEEEEEccCCCEEEEEeC-CC----cEEEEEcCCCc
Q psy13207 140 RFDIETIGNFEDHY--CTVWRVSWNITGTIVASSGD-DG----CVRLWKLKKKR 186 (197)
Q Consensus 140 ~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~~-dg----~i~iw~~~~~~ 186 (197)
.....+..+. ..+..++|+|||+.|+..+. ++ .|++||+.+++
T Consensus 226 ----~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 226 ----TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp ----CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred ----CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 2223333333 45788999999997766543 22 39999998765
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=7e-09 Score=76.30 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=103.3
Q ss_pred CCCcceeEEEECC-CCCCcEEEEEe-CCCcEEEEEcCCcccccceecccee-----ccCCCeeeEEEccC-CCcccce--
Q psy13207 23 DSRTSVTDVKFGP-KQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEV-----ACPTLASCLTWNHS-FSRFNSI-- 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~-~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~-- 92 (197)
++......++++| + +.++++.+ .++.|++|+. +++.+..+.....- ..-.....++++|+ +..+++.
T Consensus 140 ~~~~~P~~ia~~~~~--g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 140 NHFCQPTDVAVEPST--GAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp TCCSSEEEEEECTTT--CCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred cccCCCcEEEEeCCC--CeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 3445688999999 6 88888886 6899999994 44333222111000 00134789999998 5555443
Q ss_pred ---eEEEE------eeEec-ccCCCceeEEEEcCCCeEEEEe-------eCCCeEEEEEccCCcccceeeeeee---cCc
Q psy13207 93 ---SIMYE------AHSIN-AEHKDLIHDVAYDYYGLRMATC-------SSDQNIKVTRDVMGTRFDIETIGNF---EDH 152 (197)
Q Consensus 93 ---~~~~~------~~~~~-~~~~~~i~~~~~~~~~~~~~s~-------~~d~~i~~~d~~~~~~~~~~~~~~~---~~h 152 (197)
+++|+ +..+. ..+...+..++|+| .+.+++. ..+..|++||..+ ++.+..+ .++
T Consensus 217 ~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~-----g~~~~~~~~~~~~ 290 (329)
T 3fvz_A 217 NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS-----GEIIDVFKPVRKH 290 (329)
T ss_dssp TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT-----CCEEEEECCSSSC
T ss_pred CCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC-----CeEEEEEcCCCCc
Confidence 78888 33332 13556778888886 3322222 3345899999876 4555555 356
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...+..++++|+|.++++...+++|++|++...
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 677899999999988888889999999998654
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.15 E-value=2.8e-09 Score=79.55 Aligned_cols=56 Identities=7% Similarity=0.142 Sum_probs=44.1
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC--cchhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK--RKKKKE 191 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~--~~~~~~ 191 (197)
+.|.+||..+ .+.+..+..+. +.+++|+|||++|++++. ++|.+||..++ +.+..+
T Consensus 286 ~~v~viD~~t-----~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 286 AEIWVMDTKT-----KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp SEEEEEETTT-----TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 3677777765 56666666655 789999999999998886 99999999998 665554
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-09 Score=86.48 Aligned_cols=147 Identities=8% Similarity=-0.054 Sum_probs=97.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC----------CcEEEEEcCC------cccccceeccceeccCCCeeeEEEccCCC
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD----------GLVRIYEAPD------VMNLSQWCLQHEVACPTLASCLTWNHSFS 87 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d----------g~v~iw~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (197)
|...+.+++|+|+ |+.|++++.| ..|++||+.+ ++.. .+. ......+..++|+|+|+
T Consensus 128 ~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~----~~~~~~~~~~~~SpDG~ 200 (662)
T 3azo_A 128 GGLRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELS----DDAHRFVTGPRLSPDGR 200 (662)
T ss_dssp TCEEEEEEEEETT--TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESS----CSCSSEECCCEECTTSS
T ss_pred CCccccCcEECCC--CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEE----ecCCCcccCceECCCCC
Confidence 6678899999999 9999988877 5899999987 4321 111 01234677899999999
Q ss_pred cccc-------------eeEEEEee---------EecccCCCceeEEEEcCCCeEEEEeeCCC--eEEEEEccCCcccce
Q psy13207 88 RFNS-------------ISIMYEAH---------SINAEHKDLIHDVAYDYYGLRMATCSSDQ--NIKVTRDVMGTRFDI 143 (197)
Q Consensus 88 ~~~~-------------~~~~~~~~---------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~--~i~~~d~~~~~~~~~ 143 (197)
+++. .+.+|++. .+...+...+..++|+++.-++++++.++ .|.+||..+ .
T Consensus 201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-----~ 275 (662)
T 3azo_A 201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-----G 275 (662)
T ss_dssp EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-----C
T ss_pred EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-----C
Confidence 8752 25666632 12213467889999994332337777788 555555533 2
Q ss_pred eeeeeecCceec--------EEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 144 ETIGNFEDHYCT--------VWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 144 ~~~~~~~~h~~~--------v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+.......+... +..++|+|+++++++++. +.++||.++
T Consensus 276 ~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 276 AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 222222222221 467899999999999998 999999544
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.6e-09 Score=74.51 Aligned_cols=167 Identities=11% Similarity=-0.054 Sum_probs=107.1
Q ss_pred ccccceeeee---eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC
Q psy13207 9 EKCLNQWTRR---SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS 85 (197)
Q Consensus 9 ~~~~~~w~~~---~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (197)
++.+..|+.. ..+..+...+.++.++|+ |+++++...++.|.+||..+++....... ..-.....+..++++|+
T Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~d--g~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 49 QNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQ--GHLIACSHGLRRLERQREPGGEWESIADS-FEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp GTEEEEEETTSCEEEEESSCSSEEEEEECTT--CCEEEEETTTTEEEEECSTTCCEEEEECE-ETTEECCCCCCEEECTT
T ss_pred CCEEEEEECCCCeEEEECCCCCcceeeECCC--CcEEEEecCCCeEEEEcCCCCcEEEEeec-cCCCCCCCCCCEEECCC
Confidence 3445555543 234456677999999998 98888877788999999876653211110 00001345678999999
Q ss_pred CCcccc--------------------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEcc-CC
Q psy13207 86 FSRFNS--------------------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV-MG 138 (197)
Q Consensus 86 ~~~~~~--------------------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~-~~ 138 (197)
|+.+++ ...+|. +..+. .+......++|+++.-.+++.+.++.|.+|++. .+
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~-~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g 204 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPI-RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG 204 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEE-CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEee-cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC
Confidence 988763 114554 33333 455667899999443323777888999999986 21
Q ss_pred cccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 139 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..... ...+..+...+.+++++++|+++++. ++.|.+|+..
T Consensus 205 ~~~~~--~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 205 ETEYQ--GVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CEEEE--EEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred cCcCC--CeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 11001 11222344556789999999977666 7899999986
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-08 Score=73.55 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=104.0
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEE-ccCCCcccce------e
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTW-NHSFSRFNSI------S 93 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~------~ 93 (197)
.++-..+.+++++|+ ++++++...++.|.+||.. ++....+....... ....+..+++ .+++..+++. +
T Consensus 26 ~g~~~~p~~v~~~~~--g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQ--NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTT--CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCC--CCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 356678999999998 8888888899999999976 33322221100000 1245788888 4677665432 6
Q ss_pred EEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec--CceecEEEEEEccCCC
Q psy13207 94 IMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE--DHYCTVWRVSWNITGT 166 (197)
Q Consensus 94 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~ 166 (197)
.+|+ +..+...+...+.+++++++.-++++...++.|.+||... ..+..+. .+...+..++++|+|+
T Consensus 103 ~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g------~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG------NVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp EEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS------CEEEEEECTTTCSSEEEEEECSSSE
T ss_pred EEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC------CEEEEeCCCCccCCcEEEEECCCCC
Confidence 6776 3344323446788999984332336767789999999642 3333332 3445689999999999
Q ss_pred EEEEEeCCCcEEEEEcCC
Q psy13207 167 IVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~ 184 (197)
++++.+.++.|++||...
T Consensus 177 l~v~~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYEG 194 (286)
T ss_dssp EEEEEGGGTEEEEEETTC
T ss_pred EEEEECCCCEEEEEcCCC
Confidence 888888899999999743
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.07 E-value=5.8e-08 Score=71.17 Aligned_cols=165 Identities=10% Similarity=0.007 Sum_probs=105.2
Q ss_pred ccccccceeeee--eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc
Q psy13207 7 QSEKCLNQWTRR--SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 7 ~~~~~~~~w~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
..+..++.|.-. ..+..+...+.++.|+|+ |++++++..++.|.+||..+++... +. ......+.++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~~~~~-~~----~~~~~~~~~i~~~~ 96 (333)
T 2dg1_A 24 ISESELQTITAEPWLEISKKGLQLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEIKR-PF----VSHKANPAAIKIHK 96 (333)
T ss_dssp CCGGGSCEEECEEEEEEESSCCCEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEE-EE----ECSSSSEEEEEECT
T ss_pred eecccCcccccceeEEEeccCccccCcEECCC--CCEEEEECCCCEEEEEeCCCCcEEE-Ee----eCCCCCcceEEECC
Confidence 445666777322 245567777899999998 8888888899999999987764321 11 11246789999999
Q ss_pred CCCcccc---------eeEEEE-----ee-Eec-ccCCCceeEEEEcCCCeEEEEeeC------CCeEEEEEccCCcccc
Q psy13207 85 SFSRFNS---------ISIMYE-----AH-SIN-AEHKDLIHDVAYDYYGLRMATCSS------DQNIKVTRDVMGTRFD 142 (197)
Q Consensus 85 ~~~~~~~---------~~~~~~-----~~-~~~-~~~~~~i~~~~~~~~~~~~~s~~~------d~~i~~~d~~~~~~~~ 142 (197)
+++.+++ .+.+|+ +. .+. ..+...+..++++++.-++++... .+.|..+|..+
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~----- 171 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF----- 171 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-----
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC-----
Confidence 9987654 466676 22 221 123456889999843322254433 24555555543
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEE-EEeCCCcEEEEEcCC
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVA-SSGDDGCVRLWKLKK 184 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~~~dg~i~iw~~~~ 184 (197)
.+ +..+..+...+..++|+|+|+.|+ +.+.++.|.+|+++.
T Consensus 172 ~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 172 RT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 11 112222234578899999998654 445678999999964
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.9e-08 Score=81.34 Aligned_cols=153 Identities=8% Similarity=0.042 Sum_probs=95.4
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCC-----cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADG-----LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+|...+..++|+|+ |++|+.++.++ .|++||+.+++.... .+. ...+..++|+|+++.|+.+
T Consensus 122 ~~~~~~~~~~~SPD--g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----~~~-~~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 122 DGTVALRGYAFSED--GEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----VLE-RVKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp TSCEEEEEEEECTT--SSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----EEE-EECSCCEEECTTSSEEEEEECCCC
T ss_pred CCCEEEEEEEECCC--CCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----ccc-CcccceEEEEeCCCEEEEEEECCc
Confidence 35457889999999 98888765443 899999998764321 111 1236789999999887432
Q ss_pred ----------------eEEEEe--------eEecc-cCCCceeEEEEc--CCCeEEEEeeC-----CCeEEEEEccCCc-
Q psy13207 93 ----------------SIMYEA--------HSINA-EHKDLIHDVAYD--YYGLRMATCSS-----DQNIKVTRDVMGT- 139 (197)
Q Consensus 93 ----------------~~~~~~--------~~~~~-~~~~~i~~~~~~--~~~~~~~s~~~-----d~~i~~~d~~~~~- 139 (197)
+++|++ ..+.. .|...+..+.|+ +..+ +..+. +..|.+||+.+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l--~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYV--LLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE--EEEEECSSSSCCEEEEEEGGGSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEE--EEEEEccCCCccEEEEEECccccc
Confidence 566661 11120 234557789999 4444 44433 5789999986400
Q ss_pred cc-ceeeeeeecCceecEEEEEEccCCCEEEEEeCC----CcEEEEEcCCCc
Q psy13207 140 RF-DIETIGNFEDHYCTVWRVSWNITGTIVASSGDD----GCVRLWKLKKKR 186 (197)
Q Consensus 140 ~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~iw~~~~~~ 186 (197)
.. .......+..+...+.. .|+|+|+.|+..+.+ +.|.+||+.+++
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 00 01123334444444443 588999888776653 359999998764
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-08 Score=74.41 Aligned_cols=152 Identities=8% Similarity=-0.068 Sum_probs=93.8
Q ss_pred eecCCCcceeE-----EEECCCCCCcEEEEEeC-CCc--EEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc
Q psy13207 20 NLVDSRTSVTD-----VKFGPKQLGLVLATCAA-DGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 20 ~~~~h~~~v~~-----~~~~~~~~~~~l~s~~~-dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (197)
.+..|...... .+|+|+ |+.|+.++. ++. |.+||+.+++...... .....+..+.|+|+++.|+.
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-----~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRD--GSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-----GRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTT--SCEEEEEECTTSSCEEEEEETTTCEEEECCC-----SSCBCSSSCEECTTSSEEEE
T ss_pred EecCCcccccchhhcCccCCCC--CCEEEEEEcCCCCceEEEEeCCCCceEEeee-----CCCCCccceEEcCCCCEEEE
Confidence 45556555554 889999 998888877 674 7888887765322111 01223346789999998764
Q ss_pred e-----eEEEE------eeEecccCCCceeEEEE--cCCCeEEEE----------------------eeCCCeEEEEEcc
Q psy13207 92 I-----SIMYE------AHSINAEHKDLIHDVAY--DYYGLRMAT----------------------CSSDQNIKVTRDV 136 (197)
Q Consensus 92 ~-----~~~~~------~~~~~~~~~~~i~~~~~--~~~~~~~~s----------------------~~~d~~i~~~d~~ 136 (197)
. +.+|+ ..... .+...+....| +++.-+++. ...+..|.+||+.
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EeCCCeEEEEECCCCcceeeee-chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 3 67777 11222 33444444444 433222232 2345788999987
Q ss_pred CCcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCC------CcEEEEEcCCC
Q psy13207 137 MGTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDD------GCVRLWKLKKK 185 (197)
Q Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~d------g~i~iw~~~~~ 185 (197)
++ + ...+..+...+..++|+| ||+.|+..+.+ ..|.++|....
T Consensus 177 ~g-----~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 177 TG-----E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp TC-----C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred CC-----c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 62 2 223334556789999999 99998887753 36777777643
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.98 E-value=6.8e-08 Score=68.58 Aligned_cols=150 Identities=9% Similarity=-0.056 Sum_probs=100.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
..+.++.+.|+ |+++++...++.|.+|+..+..... . .......+..++++++++.+++. +.+|+
T Consensus 108 ~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~~~~--~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 108 NYPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSKTQTV--L---PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp SSEEEEEECTT--CCEEEEEGGGTEEEEECTTCCSCEE--C---CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred CCCcceEECCC--CCEEEEECCCCEEEEEECCCceeEe--e---ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 56889999998 8888887788899999755432110 0 11112457889999998865432 67777
Q ss_pred --eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
.......+...+.+++++++..++++...++.|.+|+.... ........+...+.+++++|+|+++++...++
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-----TSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-----CCEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-----cceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 11221123356788999844322266667889999998641 11111222335688999999999888888999
Q ss_pred cEEEEEcCCCcc
Q psy13207 176 CVRLWKLKKKRK 187 (197)
Q Consensus 176 ~i~iw~~~~~~~ 187 (197)
.|.++++...+.
T Consensus 256 ~v~~~~~~~~~~ 267 (270)
T 1rwi_B 256 RVVKLTSLEHHH 267 (270)
T ss_dssp EEEEECCCGGGS
T ss_pred EEEEEcCCCccc
Confidence 999999876544
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-08 Score=81.58 Aligned_cols=156 Identities=7% Similarity=-0.129 Sum_probs=99.3
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEE--eCCCcEEEEEcCCcccccceeccceeccCCCee---------eEEEc--cCCC
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATC--AADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS---------CLTWN--HSFS 87 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~--~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~ 87 (197)
+.+|...+..++|+++ +.++++. +.++...||....+....++.. ....+. ...|+ |+++
T Consensus 19 ~~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 19 VASRSGRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALP-----APWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHTCSCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSC-----TTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HhhcCCccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCC-----CCccccccccccCCccceeeeecCCC
Confidence 5678899999999987 7777777 6688999999643332222111 112222 45565 9998
Q ss_pred c-ccce----eEEEE--ee--------Eeccc-----CCCceeEEEEcCCCeEEEEeeCC----------CeEEEEEccC
Q psy13207 88 R-FNSI----SIMYE--AH--------SINAE-----HKDLIHDVAYDYYGLRMATCSSD----------QNIKVTRDVM 137 (197)
Q Consensus 88 ~-~~~~----~~~~~--~~--------~~~~~-----~~~~i~~~~~~~~~~~~~s~~~d----------~~i~~~d~~~ 137 (197)
. ++.. ..+|. +. .+. . |...+..++|+|+.-.|+.++.+ ..|++||+.+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~~l~-~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPRPLT-PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCEECS-CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCEecc-CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 8 6543 23444 32 222 2 45567889999444333777666 5889999864
Q ss_pred Ccccceeeeeeec-CceecEEEEEEccCCCEEEEEeCCC--------cEEEEEcCC
Q psy13207 138 GTRFDIETIGNFE-DHYCTVWRVSWNITGTIVASSGDDG--------CVRLWKLKK 184 (197)
Q Consensus 138 ~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~dg--------~i~iw~~~~ 184 (197)
....+......+. .+...+..++|+|||++|+.++.++ .|++||+..
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE 226 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence 1000002223344 4556778899999999999887553 799999983
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-08 Score=81.06 Aligned_cols=122 Identities=10% Similarity=-0.025 Sum_probs=78.9
Q ss_pred CCCcceeEEEECCCCCCcEEE-----EEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLA-----TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~-----s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (197)
+|...+..++|||+ |++|| +|+.+..|++||+.+++.+.. ..+. ......++|+|+++.|
T Consensus 118 ~~~~~~~~~~~SPD--G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----~~~~-~~~~~~~~wspDg~~l-------- 182 (695)
T 2bkl_A 118 DGTVSLGTWAVSWD--GKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----DVIE-GGKYATPKWTPDSKGF-------- 182 (695)
T ss_dssp SSCEEEEEEEECTT--SSEEEEEEEETTCSCCEEEEEETTTCCBCSS----CCBS-CCTTCCCEECTTSSEE--------
T ss_pred CCCEEEEEEEECCC--CCEEEEEECCCCCceEEEEEEECCCCCCcCC----cccC-cccccceEEecCCCEE--------
Confidence 46667999999999 99888 455567899999998764310 0111 1112456666666543
Q ss_pred eeEecccCCCceeEEEEcCCCeEEEEeeCC-------------CeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSD-------------QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d-------------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+.++.| ..|++|++.+.... ...+.....|...+..+.|+||
T Consensus 183 ------------------------~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-~~lv~~~~~~~~~~~~~~~SpD 237 (695)
T 2bkl_A 183 ------------------------YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-DTVVHERTGDPTTFLQSDLSRD 237 (695)
T ss_dssp ------------------------EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-CEEEECCCCCTTCEEEEEECTT
T ss_pred ------------------------EEEEecCCCCCccccCCCCCEEEEEECCCCchh-ceEEEecCCCCEEEEEEEECCC
Confidence 333333 34999998763211 2344455556667889999999
Q ss_pred CCEEEEEeCCC----cEEEEEcCC
Q psy13207 165 GTIVASSGDDG----CVRLWKLKK 184 (197)
Q Consensus 165 ~~~l~~~~~dg----~i~iw~~~~ 184 (197)
|++|+.++.++ .|.+|+...
T Consensus 238 G~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 238 GKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp SCCEEEEEEETTTEEEEEEECTTC
T ss_pred CCEEEEEEeCCCCceEEEEEcCCC
Confidence 99998887666 566665543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.5e-07 Score=67.93 Aligned_cols=147 Identities=12% Similarity=-0.031 Sum_probs=96.4
Q ss_pred ecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
+..+.....++.|+|+ ++ +++++..++.|..|+..++ ...+.. ....+.+++++++++.+++. +.
T Consensus 23 l~~~~~~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-----~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-----PSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp EECCCSSEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSC--EEEEES-----SCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred EecCCccccCCeEeCC--CCEEEEEeCCCCEEEEEECCCC--eEEEEC-----CCCCcceeeECCCCcEEEEecCCCeEE
Confidence 4455667889999998 87 7888889999999998875 222221 24567899999999876543 67
Q ss_pred EEE-----eeEeccc----CCCceeEEEEcCCCeEEEE----eeC-------------CCeEEEEEccCCcccceeeeee
Q psy13207 95 MYE-----AHSINAE----HKDLIHDVAYDYYGLRMAT----CSS-------------DQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 95 ~~~-----~~~~~~~----~~~~i~~~~~~~~~~~~~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+|+ +..+... ....++.++++++.-++++ ++. .+.|..++.. .. +..
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------g~-~~~ 166 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD------GT-LSA 166 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT------SC-EEE
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC------CC-EEE
Confidence 777 1222101 1234567888833322265 331 2345555442 11 222
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+..+......++|+|+|+.+++.+.++.|.+|++.
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 33445567899999999988777888999999987
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.87 E-value=4e-08 Score=73.42 Aligned_cols=149 Identities=8% Similarity=-0.005 Sum_probs=90.3
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCe-------------eeEEEccCCCcccc---
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLA-------------SCLTWNHSFSRFNS--- 91 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~--- 91 (197)
..+.|+|+ |+.|+.++.++.|++||+.+++........... .....+ ....|+|+++.++.
T Consensus 84 ~~~~~spd--g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 84 FGGFISTD--ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TTCEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred ccceECCC--CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 34889999 999999999999999999876532211111000 000000 00457788876532
Q ss_pred -------eeEEEE-----eeEecccCCCceeEEEEcC-CCeEEEEeeCC------CeEEEEEccCCcccceeeeeeecCc
Q psy13207 92 -------ISIMYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSD------QNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 92 -------~~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d------~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
.+.+|+ ...+. .+...+..+.|++ +.-+|+..+.+ ..|.+||... .. ...+..+
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-----~~-~~~l~~~ 234 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-----SN-VRKIKEH 234 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-----CC-CEESSCC
T ss_pred ccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-----Cc-eeEeecc
Confidence 267777 33333 4566788899986 33222443332 4678888754 22 2222222
Q ss_pred --eecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy13207 153 --YCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKR 186 (197)
Q Consensus 153 --~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~ 186 (197)
...+..++|+|+|++|+.++.+ +.|++||+.+++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 3357889999999988777654 449999997754
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.8e-08 Score=69.42 Aligned_cols=138 Identities=11% Similarity=-0.035 Sum_probs=92.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---eEEEE-----eeEecccCCCcee
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---SIMYE-----AHSINAEHKDLIH 110 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~i~ 110 (197)
+++|++++.|+.|.+||..+++.+-++.... ...+.++.+.|+++.+++. +..|+ +-.+.......+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCcccc
Confidence 7899999999999999998887654333211 1367889999999887743 45555 3333312234677
Q ss_pred EEEEcCCCeEEEEeeC-CCeEEEEEccCCcccceeeeeeec------CceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 111 DVAYDYYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFE------DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 111 ~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
++.+.++.-.+++.+. ++.|..+|.. ++.+..+. .+......+++.++|+++++...++.|..||.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~------Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK------GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT------SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC------CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 7777733332377666 7777777753 33332221 222345566789999999999999999999987
Q ss_pred CCcc
Q psy13207 184 KKRK 187 (197)
Q Consensus 184 ~~~~ 187 (197)
++.
T Consensus 155 -G~~ 157 (276)
T 3no2_A 155 -GQL 157 (276)
T ss_dssp -SCE
T ss_pred -CCE
Confidence 554
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-07 Score=71.29 Aligned_cols=151 Identities=8% Similarity=0.007 Sum_probs=101.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcC--CcccccceeccceeccCCCeeeEEEc----cCCCcccce------eE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAP--DVMNLSQWCLQHEVACPTLASCLTWN----HSFSRFNSI------SI 94 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~ 94 (197)
.+..+.|+|+ |+++++++.|+.|.+||+. +.+.+ ..+........++|+ |+++++..+ +.
T Consensus 198 ~p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~~~v------~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 198 AVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEPTTV------AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp CEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCCEE------EEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred CccceEECCC--CCEEEEEcCCCeEEEEECCCCCCcEe------EEEecCCCCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 5668999999 9999999999999999995 44333 233334456789999 699987654 67
Q ss_pred EEE------eeEeccc---------C-CCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 95 MYE------AHSINAE---------H-KDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 95 ~~~------~~~~~~~---------~-~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
++| +..+... | ...+..+..+ .....+++...+|.|.++|...... ..+..+. ......
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~---~~v~~i~-~~~~~~ 345 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN---LKTTEIS-AERFLH 345 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE---EEEEEEE-CCSSEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc---ceeeeee-cccccc
Confidence 778 3333210 1 1256667776 2223336667789999999865221 1122221 223466
Q ss_pred EEEEccCCCEEEEEe-CCCcEEEEEcCCCcchh
Q psy13207 158 RVSWNITGTIVASSG-DDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~ 189 (197)
++.|+|+|++++++. .++.|.++|+.+++...
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 889999999987766 57899999999876443
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-07 Score=71.21 Aligned_cols=128 Identities=12% Similarity=-0.013 Sum_probs=90.3
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-----eeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-----ISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 97 (197)
.+.+ |+.+.| + +..|+++ .++.|++||+.+....... .. ...++.++.+.+.. ++. .+.+|+
T Consensus 86 ~lp~-V~~l~f--d--~~~L~v~-~~~~l~v~dv~sl~~~~~~---~~--~~~~v~~i~~~~p~--~av~~~dG~L~v~d 152 (388)
T 1xip_A 86 EIPD-VIFVCF--H--GDQVLVS-TRNALYSLDLEELSEFRTV---TS--FEKPVFQLKNVNNT--LVILNSVNDLSALD 152 (388)
T ss_dssp ECTT-EEEEEE--E--TTEEEEE-ESSEEEEEESSSTTCEEEE---EE--CSSCEEEEEECSSE--EEEEETTSEEEEEE
T ss_pred eCCC-eeEEEE--C--CCEEEEE-cCCcEEEEEchhhhccCcc---ce--eecceeeEEecCCC--EEEEECCCCEEEEE
Confidence 3566 999999 7 8899888 8899999999876432211 11 13456666665543 332 278998
Q ss_pred ee--EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee--eeee------c---CceecEEEEEEccC
Q psy13207 98 AH--SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET--IGNF------E---DHYCTVWRVSWNIT 164 (197)
Q Consensus 98 ~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~--~~~~------~---~h~~~v~~~~~~p~ 164 (197)
+. ... .+...|.+++|+++.+ +.|..||.+++|+.+.. .. ...+ . +|...|.++.|.++
T Consensus 153 l~~~~~~-~~~~~Vs~v~WSpkG~--~vg~~dg~i~~~~~~~~-----~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 153 LRTKSTK-QLAQNVTSFDVTNSQL--AVLLKDRSFQSFAWRNG-----EMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp TTTCCEE-EEEESEEEEEECSSEE--EEEETTSCEEEEEEETT-----EEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred ccCCccc-cccCCceEEEEcCCce--EEEEcCCcEEEEcCCCc-----cccccceecCCcccccccCCCeeEEEEEEecC
Confidence 43 122 3557899999997777 89999999999988652 21 2223 2 46788999999999
Q ss_pred CCEEEEE
Q psy13207 165 GTIVASS 171 (197)
Q Consensus 165 ~~~l~~~ 171 (197)
+.++++=
T Consensus 225 ~~flv~y 231 (388)
T 1xip_A 225 QDFLAVF 231 (388)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9988873
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.83 E-value=8.7e-07 Score=64.12 Aligned_cols=161 Identities=9% Similarity=-0.002 Sum_probs=101.0
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----------- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 92 (197)
....+.++.++|+ |+++++. ++.|.+||..+++....... ..-.....+..++++|+++.+++.
T Consensus 52 ~~~~~~~i~~~~d--G~l~v~~--~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 52 MDAPVSSVALRQS--GGYVATI--GTKFCALNWKEQSAVVLATV-DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp CSSCEEEEEEBTT--SSEEEEE--TTEEEEEETTTTEEEEEEEC-CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred CCCceEEEEECCC--CCEEEEE--CCeEEEEECCCCcEEEEEec-CCCCCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 4567899999998 8855543 56899999876543211110 000013457889999999876543
Q ss_pred ---eEEEE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEcc--CCcccceeeeeeecCceecEEEEE
Q psy13207 93 ---SIMYE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDV--MGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ---~~~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~--~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
..+|. +..+. .+....+.++|+++. .++++.+.++.|.+|++. ++.....+.+..+..+......++
T Consensus 127 ~~~~~l~~~d~~g~~~~~~-~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~ 205 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVKKYF-DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMC 205 (297)
T ss_dssp TTCEEEEEECTTSCEEEEE-EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEE
T ss_pred CCCcEEEEEECCCCEEEEe-eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeE
Confidence 24554 12222 233456789998443 233566678899999874 221111223334444445678899
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++++|++.++...++.|..||..+++....
T Consensus 206 ~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 206 IDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp EBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 999999888887888999999987665443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.4e-07 Score=66.58 Aligned_cols=165 Identities=8% Similarity=0.017 Sum_probs=107.4
Q ss_pred ccccccceeeee-----eeecCCC-cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSR-TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~-~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++.+.+|+.. .++..+. ..+.++.+.|+ |++|+ +.++.|..||. +++.+-++... ....+.++
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~~~W~~~~~----~~~~~~~~ 82 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGRELWNIAAP----AGCEMQTA 82 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSCEEEEEECC----TTCEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCCEEEEEcCC----CCcccccc
Confidence 356667777651 2344444 46889999998 99888 34778999998 66655433321 12356778
Q ss_pred EEccCCCcccce----eEEE--E-----eeEec-----ccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 81 TWNHSFSRFNSI----SIMY--E-----AHSIN-----AEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~--~-----~~~~~-----~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
.+.++++.+++. .+++ + +..+. ..+......++.. ++.+ ++...++.|..||..
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l--v~~~~~~~v~~~d~~------ 154 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYL--VPLFATSEVREIAPN------ 154 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEE--EEETTTTEEEEECTT------
T ss_pred EECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEE--EEecCCCEEEEECCC------
Confidence 888888877543 2233 2 11111 0111233444555 5666 888899999999985
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
++.+..+... ..+.++...++|+++++++.++.|..+|..+++.+-
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 4555555443 345667888999999999988899999998776533
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.81 E-value=2e-06 Score=62.87 Aligned_cols=154 Identities=8% Similarity=0.017 Sum_probs=98.4
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------ 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (197)
.+...+.++.++|+ |+++++...+ +.|.+||..+........ .......+..+.++|+++.+++.
T Consensus 84 ~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 84 SHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDNLQDIIE---DLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp CSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCSCEEEEC---SSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred CCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc---cCccCCcccceEECCCCCEEEEecccccc
Confidence 45677999999998 8888877666 689999987654321111 11124568899999999876543
Q ss_pred ---eEEEE-------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCC-cccc---eeeeeeecCceecEE
Q psy13207 93 ---SIMYE-------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMG-TRFD---IETIGNFEDHYCTVW 157 (197)
Q Consensus 93 ---~~~~~-------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~-~~~~---~~~~~~~~~h~~~v~ 157 (197)
..+|. +..+. .....+..++|+++. .++++.+.++.|.+||.++. .... ......+.++ ..+.
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred CCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 23444 12222 223356788998443 22255566789999998531 1110 0111122222 3568
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 158 RVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
.++++++|+++++...++.|.+||..
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred ceEECCCCCEEEEEcCCCEEEEECCC
Confidence 89999999988888888999999984
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.78 E-value=5.7e-07 Score=72.65 Aligned_cols=166 Identities=11% Similarity=-0.062 Sum_probs=103.0
Q ss_pred cccccceeeeeee--e-cCCCcce--eEEEECCCCCCcEEEEEeCCCc-------------EEEEEcCCcccccceeccc
Q psy13207 8 SEKCLNQWTRRSN--L-VDSRTSV--TDVKFGPKQLGLVLATCAADGL-------------VRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 8 ~~~~~~~w~~~~~--~-~~h~~~v--~~~~~~~~~~~~~l~s~~~dg~-------------v~iw~~~~~~~~~~~~~~~ 69 (197)
.+.++++|++... + ..+...+ ..+.|+|+ |+.|+.++.|.. |++|++.++...... ..
T Consensus 145 ~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~l--v~ 220 (695)
T 2bkl_A 145 DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTV--VH 220 (695)
T ss_dssp SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEE--EE
T ss_pred ceEEEEEEECCCCCCcCCcccCcccccceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceE--EE
Confidence 3457788876531 2 2233333 68999999 999999988776 999999876532111 11
Q ss_pred eec-cCCCeeeEEEccCCCcccce---------eEEEE-----eeEecccCCCceeEEEEc-CCCeEEEEee---CCCeE
Q psy13207 70 EVA-CPTLASCLTWNHSFSRFNSI---------SIMYE-----AHSINAEHKDLIHDVAYD-YYGLRMATCS---SDQNI 130 (197)
Q Consensus 70 ~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~---~d~~i 130 (197)
... ....+..+.|+|+|++++.. +.+++ ...+. .+...+....++ ++ ++ +... .++.|
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~~~~~~g~-l~-~~s~~~~~~~~l 297 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV-KGVGAKYEVHAWKDR-FY-VLTDEGAPRQRV 297 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE-ECSSCCEEEEEETTE-EE-EEECTTCTTCEE
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee-cCCCceEEEEecCCc-EE-EEECCCCCCCEE
Confidence 111 13467899999999987543 23333 33344 344455555666 44 42 3333 35889
Q ss_pred EEEEccCCcccceeeeeeecCc-eecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 131 KVTRDVMGTRFDIETIGNFEDH-YCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
.+||+.+....... ..+..+ ...+..++|+ ++.++++...|+..++|.++
T Consensus 298 ~~~d~~~~~~~~~~--~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 298 FEVDPAKPARASWK--EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEBTTBCSGGGCE--EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCCCccCCe--EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 99998653110011 122222 4467888888 77888899999999988765
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.77 E-value=9.7e-07 Score=62.54 Aligned_cols=147 Identities=10% Similarity=0.002 Sum_probs=96.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
..+.++++.++ |+++++.. ++.|..||....... .+. ......+..++++++++.+++. +.+|+
T Consensus 67 ~~p~~i~~~~~--g~l~v~~~-~~~i~~~d~~~~~~~-~~~----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 67 YQPQGLAVDGA--GTVYVTDF-NNRVVTLAAGSNNQT-VLP----FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CSCCCEEECTT--CCEEEEET-TTEEEEECTTCSCCE-ECC----CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred CCcceeEECCC--CCEEEEcC-CCEEEEEeCCCceEe-eee----cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 56788999998 88776666 889999997654321 110 1112467899999998866542 56666
Q ss_pred -eeE-ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 -AHS-INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 -~~~-~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
... ........+.+++++++.-++++...++.|.+||.... ........+...+.+++++++|.++++...++
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~ 213 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-----NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTN 213 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-----CEEECCCSSCCSEEEEEECTTCCEEEEETTTS
T ss_pred ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-----ceEeecccCCCCceEEEECCCCCEEEEECCCC
Confidence 111 11122345788898832222366666789999998652 22222222335678999999998888777889
Q ss_pred cEEEEEcCCC
Q psy13207 176 CVRLWKLKKK 185 (197)
Q Consensus 176 ~i~iw~~~~~ 185 (197)
.|.+|+....
T Consensus 214 ~v~~~~~~~~ 223 (270)
T 1rwi_B 214 QVVKLLAGST 223 (270)
T ss_dssp CEEEECTTCS
T ss_pred cEEEEcCCCC
Confidence 9999998654
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.4e-07 Score=69.20 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=91.8
Q ss_pred cccceeeee----eeecCCCcceeEEEECC-CCCCcEEEEEeCC------CcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGP-KQLGLVLATCAAD------GLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
..+..|++. ..+..+...+..+.|+| + +..|+.++.+ ..|.+|++...+... +.. -.....+.
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~-~~~~~~~~ 241 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWLGHPIYRPFD--DSTVGFCHEGPHDLVDARMWLVNEDGSNVRK---IKE-HAEGESCT 241 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTE--EEEEEEEECSCSSSCSCCCEEEETTSCCCEE---SSC-CCTTEEEE
T ss_pred ceEEEEECCCCcEEeeccCCcccccceECCCC--CCEEEEEecCCCCCCCceEEEEECCCCceeE---eec-cCCCcccc
Confidence 345555532 12334566788999999 7 7766665543 368888876543211 111 00023477
Q ss_pred eEEEccCCCcccce----------eEEEE-----eeEecccCCCceeEEEEcC-CCeEEEEee----------------C
Q psy13207 79 CLTWNHSFSRFNSI----------SIMYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCS----------------S 126 (197)
Q Consensus 79 ~~~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~----------------~ 126 (197)
.+.|+|+++.++.. +.+|+ ...+. ... ... +.|++ +.-+++.++ .
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECC-SEE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 88999999986533 66777 12222 111 223 77875 443335543 3
Q ss_pred CCeEEEEEccCCcccceeeeeeecCcee-----------cEEEEEEccCCCEEEEEeC-CCcEEEEEcC
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYC-----------TVWRVSWNITGTIVASSGD-DGCVRLWKLK 183 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~ 183 (197)
+..|.+||..++ . ...+..+.. .+..++|+|+|+.|+.++. ++...+|.++
T Consensus 319 ~~~i~~~d~~~~-----~-~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 319 DPFLYVLNTKAK-----S-AQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCEEEEEETTTT-----B-CCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCcEEEEecccC-----c-eEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 478999998752 1 122222322 2456789999998887764 5666666554
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-06 Score=62.35 Aligned_cols=147 Identities=8% Similarity=0.044 Sum_probs=92.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCC---------------CcEEEEEcCCcccccceeccceeccCCCeeeEEEc----cCC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAAD---------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWN----HSF 86 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~d---------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 86 (197)
..+.++.+.|+ |+++++...+ +.|..++.. ++.. .+ .........++|+ |++
T Consensus 117 ~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~-----~~~~~~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 117 QGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QV-----DTAFQFPNGIAVRHMNDGRP 187 (314)
T ss_dssp BCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EE-----EEEESSEEEEEEEECTTSCE
T ss_pred cCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-Ee-----ccCCCCcceEEEecccCCCC
Confidence 35789999998 8888777655 456666654 2211 11 1112345788999 998
Q ss_pred Cccc-c-----eeEEEEee---------Eec--ccCC-CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 87 SRFN-S-----ISIMYEAH---------SIN--AEHK-DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 87 ~~~~-~-----~~~~~~~~---------~~~--~~~~-~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+.+. + .+.+|+.. .+. ..+. .....++++++..++++...++.|.+||.++ .+.+..
T Consensus 188 ~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~-----g~~~~~ 262 (314)
T 1pjx_A 188 YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG-----GQPKMR 262 (314)
T ss_dssp EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC-----BSCSEE
T ss_pred CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC-----CcEeEE
Confidence 6542 2 26777632 111 0222 5578888883332226666788999999864 233334
Q ss_pred ecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCc
Q psy13207 149 FEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~ 186 (197)
+..+...+.+++++|+|+.| ++...++.|..|++...+
T Consensus 263 ~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 263 IRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred EeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 44455678999999999955 455567899999987644
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.69 E-value=5.2e-07 Score=73.40 Aligned_cols=149 Identities=17% Similarity=0.120 Sum_probs=88.8
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC-----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD-----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------ 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (197)
|...+..+.|+|+ |++|+.++.+ ..|++||+.+++.+.. .+. ...+..++|+|+ +.++.+
T Consensus 161 ~~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-----~~~-~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 161 GATALDAWAASDD--GRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-----ELK-WVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp --EEEEEEEECTT--SSEEEEEEEETTCSEEEEEEEETTTCCEEEE-----EEE-EEESCCCEESTT-SEEEEEECCCC-
T ss_pred CCEEEEeEEECCC--CCEEEEEEcCCCCceEEEEEEECCCCCCCCc-----cCC-CceeccEEEECC-CEEEEEEecCcc
Confidence 4447889999999 9888876543 3699999998865321 111 112357889999 766432
Q ss_pred -------------eEEEEe--------eEecc-cCCCceeEEEEcCCCeEEEEeeC-----CCeEEEEEccCCcccceee
Q psy13207 93 -------------SIMYEA--------HSINA-EHKDLIHDVAYDYYGLRMATCSS-----DQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 93 -------------~~~~~~--------~~~~~-~~~~~i~~~~~~~~~~~~~s~~~-----d~~i~~~d~~~~~~~~~~~ 145 (197)
+++|++ ..+.. .+...+..+.|+++.-.++..+. ...|.+||+.++. ...
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~ 308 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK---IGP 308 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE---ECC
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC---Ccc
Confidence 445551 12220 22235788899944322244443 3489999986520 121
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCC----CcEEEEEcCCC
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDD----GCVRLWKLKKK 185 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~iw~~~~~ 185 (197)
...+..+...+... ++|+|+.|+..+.+ +.|.+||+.++
T Consensus 309 ~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 309 VTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred cEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 33333343344444 34899988887754 45999998775
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.66 E-value=5.5e-06 Score=59.91 Aligned_cols=159 Identities=3% Similarity=-0.119 Sum_probs=95.3
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc-eeccceeccCCCeeeEEEccCCCcccce----------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ-WCLQHEVACPTLASCLTWNHSFSRFNSI---------- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 92 (197)
+...+.++.++++ +..|..++..+.|..||.. ++.... ..... -.....+.+++++++++.+++.
T Consensus 69 ~~~~~~~i~~~~~--~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRD--ANQLFVADMRLGLLVVQTD-GTFEEIAKKDSE-GRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSS--SSEEEEEETTTEEEEEETT-SCEEECCSBCTT-SCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecC--CCcEEEEECCCCEEEEeCC-CCEEEEEeccCC-CccccCCcCEEECCCCCEEEEecCcccccccc
Confidence 4467889999986 3344444445578899987 432211 11000 0012457899999998776443
Q ss_pred --------eEEEE------eeEecccCCCceeEEEEc----CCC-eEEEEeeCCCeEEEEEcc-CCcccceeeeeeecCc
Q psy13207 93 --------SIMYE------AHSINAEHKDLIHDVAYD----YYG-LRMATCSSDQNIKVTRDV-MGTRFDIETIGNFEDH 152 (197)
Q Consensus 93 --------~~~~~------~~~~~~~~~~~i~~~~~~----~~~-~~~~s~~~d~~i~~~d~~-~~~~~~~~~~~~~~~h 152 (197)
..+|. +..+. .+......++++ ++. .++++...++.|.+||.+ .+..........+..+
T Consensus 145 ~~~~~~~~~~l~~~~~~g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTDGQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp CBTTSSSCEEEEEECTTSCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred cccccCCCCeEEEECCCCCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 23443 11222 223345778888 665 223555668899999975 2111111233334444
Q ss_pred e-ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 153 Y-CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 153 ~-~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
. ..+..++++++|+++++...++.|.+||.++++.
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE
Confidence 3 5678899999999888887889999999875543
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.2e-06 Score=64.31 Aligned_cols=131 Identities=11% Similarity=0.111 Sum_probs=84.9
Q ss_pred eeEEEECCCCCCcEEEEEeCC---------------------------CcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 28 VTDVKFGPKQLGLVLATCAAD---------------------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~d---------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..+.|+|+ |+.|+.++.+ ..|.+||+.+++.+..+.. . .+..+
T Consensus 106 ~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~------~-~~~~~ 176 (347)
T 2gop_A 106 IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK------P-RFSSG 176 (347)
T ss_dssp EEEEEECTT--SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE------E-TTCEE
T ss_pred ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC------C-Ccccc
Confidence 899999999 8888877642 5788999887654222211 2 67788
Q ss_pred EEccCCCcccce------------eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC--------CeEEEE
Q psy13207 81 TWNHSFSRFNSI------------SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD--------QNIKVT 133 (197)
Q Consensus 81 ~~~~~~~~~~~~------------~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d--------~~i~~~ 133 (197)
.|+|++ .++++ ..+|. ...+. .+ ..+..+ + ++.+ +.++.+ ..|.+|
T Consensus 177 ~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~-~~-~~~~~~--spdg~~l--~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 177 IWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMF-EK-VSFYAV--DSDGERI--LLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEE-EE-ESEEEE--EECSSCE--EEEECCSSSCCCSSCEEEEE
T ss_pred cCCCCe-EEEEEecccccccccccccEEEeCCCceEEec-cC-cceeeE--CCCCCEE--EEEEccccCCccccceEEEE
Confidence 999998 54332 24444 22222 22 333333 5 5556 555433 467777
Q ss_pred EccCCcccceeeeeeecCceecEEE-EEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVWR-VSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
| + .+.......+...+.. +.|+ ++ ++++++.++.+++| +.+
T Consensus 250 d--~-----~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 250 D--G-----KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp C--S-----SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred C--C-----CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 7 3 3333344456667876 9999 88 89999999999999 874
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.66 E-value=7.9e-07 Score=65.37 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=83.5
Q ss_pred cceeEEEECCCCCCcEEEEEe---------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA---------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..+....+ + |+.++... .++.|.+|++.+++.. .+ ..+..+.|+|+|+.++..
T Consensus 15 ~~~~~~~~--d--G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l---------~~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 15 AYLSDPRT--K--GELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI---------ENATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp CEEEEEEE--E--TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE---------ESCEEEEECTTSSEEEEEEEET
T ss_pred EEcccceE--C--CcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec---------ccCCCeEECCCCCEEEEEEecc
Confidence 45677777 6 77776542 3678999998876421 11 357789999999987543
Q ss_pred ------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeC---------------------------CCeEEEEE
Q psy13207 93 ------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSS---------------------------DQNIKVTR 134 (197)
Q Consensus 93 ------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---------------------------d~~i~~~d 134 (197)
+.+|+ ...+. .+.. +..++|+|+.-.|+.++. ...|.+||
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred CCCcceEEEEECCCCceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 44555 22232 2333 889999944322255542 25688899
Q ss_pred ccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-------cEEEEEcC
Q psy13207 135 DVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-------CVRLWKLK 183 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-------~i~iw~~~ 183 (197)
+.+ ++.+..+.. . .+..++|+|+| +++++..++ ...+|.++
T Consensus 159 ~~~-----~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 159 TES-----EEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp TTT-----TEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred CCC-----CeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 875 333233333 3 67889999999 887776542 44566554
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-05 Score=56.78 Aligned_cols=150 Identities=10% Similarity=-0.000 Sum_probs=99.2
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
+..+...+.++.+.++ |+++++...++.|..||.. ++ ...+... .....+..+++++++..+++. +..
T Consensus 10 ~~~~~~~~~~i~~d~~--g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDK--GKVWITQHKANMISCINLD-GK-ITEYPLP---TPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp CCSSSCCEEEEEECTT--SCEEEEETTTTEEEEECTT-CC-EEEEECS---STTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCcCCCccceEECCC--CCEEEEecCCCcEEEEcCC-CC-eEEecCC---cccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 4455678999999998 8888777778899999987 33 2111111 124568899999998876542 566
Q ss_pred EE----eeEecc-cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 96 YE----AHSINA-EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 96 ~~----~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
|+ +..+.. .....+..+++.++..++++...++.|.+||. +. .............+..++++|+|++.++
T Consensus 83 ~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 83 ITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG----KIREYELPNKGSYPSFITLGSDNALWFT 157 (299)
T ss_dssp ECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC----CEEEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred ECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CC----CEEEecCCCCCCCCceEEEcCCCCEEEE
Confidence 66 222220 23456888998843322266666789999987 31 1111122233456889999999988887
Q ss_pred EeCCCcEEEEEc
Q psy13207 171 SGDDGCVRLWKL 182 (197)
Q Consensus 171 ~~~dg~i~iw~~ 182 (197)
...++.|..||.
T Consensus 158 ~~~~~~i~~~~~ 169 (299)
T 2z2n_A 158 ENQNNAIGRITE 169 (299)
T ss_dssp ETTTTEEEEECT
T ss_pred eCCCCEEEEEcC
Confidence 777789999988
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-05 Score=65.17 Aligned_cols=149 Identities=9% Similarity=-0.058 Sum_probs=93.9
Q ss_pred CCcceeEEEECCCCCCcEEEEEeC-----CCcEEEEEcCC------cc-cccceeccceeccCCCeeeEEEccCCCcccc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAA-----DGLVRIYEAPD------VM-NLSQWCLQHEVACPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~-----dg~v~iw~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (197)
|...+..+.|+|+ |++|+.++. +..|.+||+.+ +. ....+. .....+. ..|+|+++.++.
T Consensus 231 ~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~-----~~~~~~~-~~~s~dg~~l~~ 302 (710)
T 2xdw_A 231 EPKWMGGAELSDD--GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI-----DNFEGEY-DYVTNEGTVFTF 302 (710)
T ss_dssp CTTCEEEEEECTT--SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE-----CSSSSCE-EEEEEETTEEEE
T ss_pred CCeEEEEEEEcCC--CCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee-----CCCCcEE-EEEeccCCEEEE
Confidence 4556789999999 888877664 67899999876 32 111111 1122222 257888876532
Q ss_pred ---------eeEEEEe--------eEecccCCC--ceeEEEEcCCCeEEEEeeCCCeE--EEEEccCCcccceeeeeeec
Q psy13207 92 ---------ISIMYEA--------HSINAEHKD--LIHDVAYDYYGLRMATCSSDQNI--KVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 92 ---------~~~~~~~--------~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i--~~~d~~~~~~~~~~~~~~~~ 150 (197)
.+.+|++ ..+. .|.. .+..++|++...++++...|+.. .+|++.+ +..+..+.
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-----g~~~~~l~ 376 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-----GALLKIFP 376 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT-----CCEEEEEC
T ss_pred EECCCCCCCEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-----CCEEEecC
Confidence 1566662 3444 4443 57788888333333777778755 4556533 44455566
Q ss_pred CceecEEEEEEccCCCEEEEE-e---CCCcEEEEEcCCCc
Q psy13207 151 DHYCTVWRVSWNITGTIVASS-G---DDGCVRLWKLKKKR 186 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~-~---~dg~i~iw~~~~~~ 186 (197)
.+...+..++++|+++.++.. + ..++++.||+.+++
T Consensus 377 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 377 LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 667788899999998766533 2 34789999998765
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.57 E-value=8.9e-06 Score=59.70 Aligned_cols=151 Identities=9% Similarity=-0.109 Sum_probs=92.4
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------eeEEEE-
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ISIMYE- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 97 (197)
......++++++ +..+++...++.|.+||..+.+....+..............+++ ..+..+++ .+.++|
T Consensus 83 ~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 83 FTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CSSEEEEEEEET--TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCCCcEEEEeCC--CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 356788999888 86666665899999999988765433332110000114455666 33333322 267777
Q ss_pred -----eeEecccCCCceeEEEEcCCCeEEEEeeCC----------CeEEEEEccCCcccceeeeeeecCc-eecEEEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDYYGLRMATCSSD----------QNIKVTRDVMGTRFDIETIGNFEDH-YCTVWRVSW 161 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d----------~~i~~~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~ 161 (197)
+..+. . ......++++++.-+++++..+ +.|.++|..+ .+....+... ......+++
T Consensus 160 ~t~~~~~~i~-~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-----~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 160 ETDKVVDELT-I-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-----FTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp TTTEEEEEEE-C-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-----TEEEEEEECCTTCCCEEEEE
T ss_pred CCCeEEEEEE-c-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-----CeEEEEEecCCCCCceeEEE
Confidence 23333 1 2345677787433333555544 7899999876 3444333221 235789999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+|+++.|+.+.. .|.+||..+++.
T Consensus 233 ~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 233 NGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ecCCCEEEEEcc--EEEEEECCCCce
Confidence 999998887754 899999987653
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.49 E-value=3.2e-05 Score=56.67 Aligned_cols=153 Identities=7% Similarity=-0.071 Sum_probs=93.1
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------eEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---------SIM 95 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 95 (197)
...+.++.|+|+ |+++++. .+ .|.+||..+++... +.....-.....+..+.++|+++.+++. ..+
T Consensus 89 ~~~v~~i~~~~d--g~l~v~~-~~-gl~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 89 PFMGSALAKISD--SKQLIAS-DD-GLFLRDTATGVLTL-HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp SSCEEEEEEEET--TEEEEEE-TT-EEEEEETTTCCEEE-EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE
T ss_pred CCcceEEEEeCC--CeEEEEE-CC-CEEEEECCCCcEEE-EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEE
Confidence 457899999998 8877754 34 48899987664321 1100000012357889999999876543 245
Q ss_pred EEee-----EecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEcc--CC-cccceeeeeeecCceecEEEEEEccCCC
Q psy13207 96 YEAH-----SINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDV--MG-TRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 96 ~~~~-----~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~--~~-~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
|.+. .+. .+......++|+++. .++++.+.++.|.+||.. ++ .......+..+.........++++++|+
T Consensus 164 ~~~~~g~~~~~~-~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 164 YHVAKGKVTKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp EEEETTEEEEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred EEEeCCcEEEee-CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 5421 221 222346788998443 222455567899999985 32 1111122333333344567899999999
Q ss_pred EEEEEeCCCcEEEEEcC
Q psy13207 167 IVASSGDDGCVRLWKLK 183 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~ 183 (197)
+.++...++.|..||..
T Consensus 243 lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEETTTEEEEECTT
T ss_pred EEEEEeCCCEEEEECCC
Confidence 88877677899999873
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=6.2e-05 Score=53.76 Aligned_cols=148 Identities=7% Similarity=-0.083 Sum_probs=96.0
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 97 (197)
....+.++.+.|+ |.++++...++.|..||. +++.. .+.. ......+..+++.+++..+++. +..|+
T Consensus 97 ~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~-~g~~~-~~~~---~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 97 PDSAPYGITEGPN--GDIWFTEMNGNRIGRITD-DGKIR-EYEL---PNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp TTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TCCEE-EEEC---SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred cCCCceeeEECCC--CCEEEEecCCceEEEECC-CCCEE-EecC---CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 3456889999998 888888777889999998 43221 1111 0113467899999998766532 55565
Q ss_pred ---eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 ---AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 ---~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
+..+. ......+..++++++.-++++...++.|.+||. +.. .. ......+...+.+++++++|+++++...
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~---~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE---IT-EFKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC---EE-EEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc---EE-EEECCCCCCCceeEEECCCCCEEEeccC
Confidence 22221 133456788988833222255556789999998 421 11 1223334567889999999997777667
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
++.|..||..
T Consensus 245 ~~~i~~~d~~ 254 (299)
T 2z2n_A 245 ANKIGRLTSN 254 (299)
T ss_dssp TTEEEEEETT
T ss_pred CceEEEECCC
Confidence 8899999973
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.43 E-value=7.5e-06 Score=60.12 Aligned_cols=146 Identities=3% Similarity=-0.043 Sum_probs=94.8
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE---- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---- 97 (197)
....+.+.. +..+++...++.|.++|..+.+.+.++ ........++++++++.+++. +.+||
T Consensus 45 ~~~~i~~~~---~~lyv~~~~~~~v~viD~~t~~~~~~i------~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 45 VAQSMVIRD---GIGWIVVNNSHVIFAIDINTFKEVGRI------TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp CEEEEEEET---TEEEEEEGGGTEEEEEETTTCCEEEEE------ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred cceEEEEEC---CEEEEEEcCCCEEEEEECcccEEEEEc------CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 456777743 566777777899999999988765443 224567889998888654433 67777
Q ss_pred --eeEecccC----CCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 --AHSINAEH----KDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 --~~~~~~~~----~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+..+. ......+++.+..+ +++.. .++.|.++|..+ .+.+..+... .....++++|+|+++++
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~~~~~l-yv~~~~~~~~v~viD~~t-----~~~~~~i~~g-~~p~~i~~~~dG~l~v~ 188 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQYGKYV-YVNCWSYQNRILKIDTET-----DKVVDELTIG-IQPTSLVMDKYNKMWTI 188 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEEETTEE-EEEECTTCCEEEEEETTT-----TEEEEEEECS-SCBCCCEECTTSEEEEE
T ss_pred eEEEEEEcCCccccCCCcceEEEECCEE-EEEcCCCCCEEEEEECCC-----CeEEEEEEcC-CCccceEEcCCCCEEEE
Confidence 22333111 11455667764444 14443 488999999976 3444444322 23467899999997777
Q ss_pred EeCC----------CcEEEEEcCCCcch
Q psy13207 171 SGDD----------GCVRLWKLKKKRKK 188 (197)
Q Consensus 171 ~~~d----------g~i~iw~~~~~~~~ 188 (197)
+..+ +.|.++|..+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred ECCCccCCccccCCceEEEEECCCCeEE
Confidence 6654 78999999876543
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.40 E-value=9.9e-05 Score=54.05 Aligned_cols=141 Identities=9% Similarity=-0.065 Sum_probs=86.6
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---eEEEE-----e
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---SIMYE-----A 98 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~ 98 (197)
-..+..|+|+. +.++++...++.|..||..+++.. .+ .....+.++.|+++++.+++. +.+|+ +
T Consensus 50 ~~egp~~~~~~-~~l~~~d~~~~~i~~~d~~~~~~~-~~------~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 50 LGEGPTFDPAS-GTAWWFNILERELHELHLASGRKT-VH------ALPFMGSALAKISDSKQLIASDDGLFLRDTATGVL 121 (326)
T ss_dssp BEEEEEEETTT-TEEEEEEGGGTEEEEEETTTTEEE-EE------ECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE
T ss_pred CCcCCeEeCCC-CEEEEEECCCCEEEEEECCCCcEE-EE------ECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcE
Confidence 45678899962 566777778899999998775421 11 114578899999999877653 67777 2
Q ss_pred eEeccc----CCCceeEEEEcCCCeEEEEeeC------CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 99 HSINAE----HKDLIHDVAYDYYGLRMATCSS------DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 99 ~~~~~~----~~~~i~~~~~~~~~~~~~s~~~------d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
..+... ....++.++++++.-++++... .+.|..++ + .+.. .+..+......++|+|+++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-----g~~~-~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-----GKVT-KLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-----TEEE-EEEEEESSEEEEEECTTSCEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-----CcEE-EeeCCCcccCCeEEcCCCCEE
Confidence 222201 1235788899833221243322 24455555 2 1211 111223356789999999876
Q ss_pred EEE-eCCCcEEEEEcC
Q psy13207 169 ASS-GDDGCVRLWKLK 183 (197)
Q Consensus 169 ~~~-~~dg~i~iw~~~ 183 (197)
+.+ +.++.|.+|++.
T Consensus 194 yv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEETTTCEEEEEEBC
T ss_pred EEEECCCCEEEEEEcc
Confidence 554 567899999986
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.36 E-value=9e-06 Score=66.18 Aligned_cols=108 Identities=6% Similarity=-0.095 Sum_probs=69.0
Q ss_pred CeeeEEEccCCCcccce----------eEEEEeeE---ec-ccCCCceeEEEEcCCCeEEEEeeCCC-------------
Q psy13207 76 LASCLTWNHSFSRFNSI----------SIMYEAHS---IN-AEHKDLIHDVAYDYYGLRMATCSSDQ------------- 128 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~----------~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~s~~~d~------------- 128 (197)
.+..++|+|+|++++.+ +++||+.. +. ..+...+..++|+++ -.|+.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 57889999999998643 56777111 11 011122356788876 4445555544
Q ss_pred -eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCC
Q psy13207 129 -NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-----CVRLWKLKKK 185 (197)
Q Consensus 129 -~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~iw~~~~~ 185 (197)
.|++|++.+.... ...+.....+...+..+.|+|||++|+..+.++ .|++||+.++
T Consensus 243 ~~v~~~~lgt~~~~-~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 243 QTVWLHRLGTPQSA-DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CEEEEEETTSCGGG-CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CEEEEEECCCCchh-CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 3888988653211 233444444444688999999999998887554 7999999765
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.4e-05 Score=57.86 Aligned_cols=146 Identities=14% Similarity=-0.005 Sum_probs=90.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~- 97 (197)
.....++|+|+ ++++++...++.|+.||..++....... ...... ++|+++++.+.. .+..++
T Consensus 131 ~~P~~la~d~~--g~lyv~d~~~~~I~~id~~~g~~~~~~~------~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVGN--NTVLAYQRDDPRVRLISVDDNKVTTVHP------GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECST--TEEEEEETTTTEEEEEETTTTEEEEEEE------TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeCC--CCEEEEecCCCcEEEEECCCCEEEEeec------cCCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 46789999998 8888888888999999998654321111 122233 899999986533 244444
Q ss_pred -----eeEe---cccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeee--ecCceecE--EEEEEccC
Q psy13207 98 -----AHSI---NAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGN--FEDHYCTV--WRVSWNIT 164 (197)
Q Consensus 98 -----~~~~---~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~h~~~v--~~~~~~p~ 164 (197)
...+ .......+.++++++ +..+ ..+..++.|+.||..+.. ...+.. ..++...- ..++|+|+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~l-yv~d~~~~I~~~d~~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWL-YFVDSNKNFGRFNVKTQE---VTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEE-EEECTTCEEEEEETTTCC---EEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeE-EEEECCCcEEEEECCCCC---EEEEecccccCCCCCCccccEEEeCC
Confidence 1222 102445678888885 3332 336668899999987521 111111 12222222 28999995
Q ss_pred -CCEEEEEeCCCcEEEEEcCC
Q psy13207 165 -GTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 165 -~~~l~~~~~dg~i~iw~~~~ 184 (197)
+.++++...++.|+.|+...
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTC
T ss_pred CCEEEEEeCCCCEEEEEecCC
Confidence 66666667788999998753
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.35 E-value=5.3e-05 Score=54.65 Aligned_cols=133 Identities=11% Similarity=0.094 Sum_probs=82.4
Q ss_pred cceeEEEECCCCCCcEEEEEeCC---------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAAD---------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..++++.++|+ |+++++...+ ..-.||.+........ ..........++|+|+++.+..+
T Consensus 98 ~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-----~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 98 NRFNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-----YFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp EEEEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-----EEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECCCCEEE-----EeeccccccceEEcCCCCEEEEecCCC
Confidence 45789999998 8877655322 3345665543221111 11112345789999999865322
Q ss_pred --eEEEEee----------Eec--ccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecE
Q psy13207 93 --SIMYEAH----------SIN--AEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV 156 (197)
Q Consensus 93 --~~~~~~~----------~~~--~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v 156 (197)
+..|++. .+. ..+......+++. ++.. ++....+.|.+||..+ ++.+..+..+...+
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw--va~~~~~~v~~~d~~t-----G~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW--VACYNGGRVIRLDPVT-----GKRLQTVKLPVDKT 243 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE--EEEETTTEEEEECTTT-----CCEEEEEECSSSBE
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE--EEEcCCCEEEEEcCCC-----ceEEEEEECCCCCc
Confidence 5666521 111 0223457788887 4444 6666778899999875 55666666666678
Q ss_pred EEEEEc-cCCCEEEEEe
Q psy13207 157 WRVSWN-ITGTIVASSG 172 (197)
Q Consensus 157 ~~~~~~-p~~~~l~~~~ 172 (197)
++++|. |+++.|+.++
T Consensus 244 t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEESGGGCEEEEEE
T ss_pred eEEEEeCCCCCEEEEEc
Confidence 999998 8887665554
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3e-06 Score=68.53 Aligned_cols=135 Identities=11% Similarity=0.066 Sum_probs=77.7
Q ss_pred CCCcceeEEEECCCCCCcEEEE-----EeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLAT-----CAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s-----~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (197)
+|...+..+.|||+ |++||- |+....|++||+.+++.+.. .+. ......++|+ +++.|+..
T Consensus 126 ~~~~~l~~~~~SpD--g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----~~~-~~k~~~~~Ws-Dg~~l~y~----- 191 (693)
T 3iuj_A 126 DGTTALDQLSFSRD--GRILAYSLSLAGSDWREIHLMDVESKQPLET-----PLK-DVKFSGISWL-GNEGFFYS----- 191 (693)
T ss_dssp TSCCEEEEEEECTT--SSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----EEE-EEESCCCEEE-TTTEEEEE-----
T ss_pred CCcEEEEEEEECCC--CCEEEEEEecCCCceEEEEEEECCCCCCCcc-----ccC-CceeccEEEe-CCCEEEEE-----
Confidence 46667889999999 988873 33346899999998764321 111 0112456677 66553221
Q ss_pred eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-ceecEEEEEEccCCCEEEEEeC---
Q psy13207 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWNITGTIVASSGD--- 173 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~~--- 173 (197)
..... . +..+ -.......|++|++.+... +...+..... |......+.|+|||++|+..+.
T Consensus 192 ------~~~~~-~-----~~~~--~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 192 ------SYDKP-D-----GSEL--SARTDQHKVYFHRLGTAQE-DDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp ------ESSCC-C--------------CCCCEEEEEETTSCGG-GCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ------EecCc-c-----cccc--cccCCCcEEEEEECCCCcc-cceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 00000 0 0000 1112335688999865321 1234444444 5566788999999998865442
Q ss_pred -CCcEEEEEcCCCc
Q psy13207 174 -DGCVRLWKLKKKR 186 (197)
Q Consensus 174 -dg~i~iw~~~~~~ 186 (197)
+..|+++|+.++.
T Consensus 257 ~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 257 SGNRLYVKDLSQEN 270 (693)
T ss_dssp SCCEEEEEETTSTT
T ss_pred CCcEEEEEECCCCC
Confidence 2589999987653
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-05 Score=63.58 Aligned_cols=109 Identities=8% Similarity=-0.026 Sum_probs=74.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (197)
+.++++...+++|.++|..+.+.+.++. ....+..+.|+++.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~--------------------------------------~g~~p~~v~~SpDG 208 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLD--------------------------------------TGYAVHISRLSASG 208 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEE--------------------------------------CSSCEEEEEECTTS
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEe--------------------------------------CCCCccceEECCCC
Confidence 6677888899999999998875443222 11233455565332
Q ss_pred eEEEEeeCCCeEEEEEcc--CCcccceeeeeeecCceecEEEEEEc----cCCCEEEEEeC-CCcEEEEEcCCCcchhhh
Q psy13207 119 LRMATCSSDQNIKVTRDV--MGTRFDIETIGNFEDHYCTVWRVSWN----ITGTIVASSGD-DGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~--~~~~~~~~~~~~~~~h~~~v~~~~~~----p~~~~l~~~~~-dg~i~iw~~~~~~~~~~~ 191 (197)
-++++++.|+.|.+||+. + .+.+..+.... ....++|+ |||++++++.. ++++.++|..+.+..+.+
T Consensus 209 r~lyv~~~dg~V~viD~~~~t-----~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 209 RYLFVIGRDGKVNMIDLWMKE-----PTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp CEEEEEETTSEEEEEETTSSS-----CCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCC-----CcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 222677889999999995 4 44455554433 34789999 69998888774 599999998887665543
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00032 Score=50.01 Aligned_cols=149 Identities=5% Similarity=-0.120 Sum_probs=96.9
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEE
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMY 96 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 96 (197)
......+.++.+.++ |.++++...++.|..+|.. ++.. .+... .....+..+++.+++..+++. +..|
T Consensus 16 ~~~~~~p~~i~~d~~--g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 16 SIPDSGPYGITSSED--GKVWFTQHKANKISSLDQS-GRIK-EFEVP---TPDAKVMCLIVSSLGDIWFTENGANKIGKL 88 (300)
T ss_dssp SSTTCCEEEEEECTT--SCEEEEETTTTEEEEECTT-SCEE-EEECS---STTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCCCcceeeECCC--CCEEEEcCCCCeEEEECCC-CceE-EEECC---CCCCcceeEEECCCCCEEEEecCCCeEEEE
Confidence 344567899999998 8888887788999999977 3321 12111 113567889999988765432 5666
Q ss_pred E----eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 97 E----AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 97 ~----~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
+ ...+. ......+.++++.++.-++++...++.|..+|... ......+......+.++++.++|++.++.
T Consensus 89 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 89 SKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG-----TIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp CTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-----CEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC-----CEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 5 22222 02345688888883322226655678898898752 11111223234567899999999977777
Q ss_pred eCCCcEEEEEc
Q psy13207 172 GDDGCVRLWKL 182 (197)
Q Consensus 172 ~~dg~i~iw~~ 182 (197)
..++.|..++.
T Consensus 164 ~~~~~i~~~~~ 174 (300)
T 2qc5_A 164 NQNNSIGRITN 174 (300)
T ss_dssp TTTTEEEEECT
T ss_pred cCCCeEEEECC
Confidence 66788999987
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.31 E-value=7.4e-05 Score=54.10 Aligned_cols=149 Identities=7% Similarity=-0.084 Sum_probs=90.4
Q ss_pred ecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
+...........|+|+ ++ ++++...++.|..|+.. ++ ...+. .....+..+.++++++.+++. +.
T Consensus 40 l~~~~~~~egp~~~~~--g~~l~~~d~~~~~i~~~~~~-g~-~~~~~-----~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEA--QRTLVWSDLVGRRVLGWRED-GT-VDVLL-----DATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp EECCCSSEEEEEEEGG--GTEEEEEETTTTEEEEEETT-SC-EEEEE-----ESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred EecCCcCccCCeEeCC--CCEEEEEECCCCEEEEEeCC-CC-EEEEe-----CCCCccceeeECCCCCEEEEECCCCEEE
Confidence 3344556778999998 76 67788888999999873 32 11111 124567899999999876542 56
Q ss_pred EEE----eeEecc---c-CCCceeEEEEcCCCeEEEE----eeC-------------CCeEEEEEccCCcccceeeeeee
Q psy13207 95 MYE----AHSINA---E-HKDLIHDVAYDYYGLRMAT----CSS-------------DQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 95 ~~~----~~~~~~---~-~~~~i~~~~~~~~~~~~~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+ +..+.. + ....++.++++++.-++++ |.. .+.|..+|..++ +... +
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-----~~~~-~ 184 (305)
T 3dr2_A 111 RSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-----PLQR-M 184 (305)
T ss_dssp EECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-----CCEE-E
T ss_pred EECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-----cEEE-E
Confidence 665 222210 1 1234567888833322254 332 245666666432 1111 1
Q ss_pred cCceecEEEEEEccCCCEEEEEeCC------CcEEEEEcCCC
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDD------GCVRLWKLKKK 185 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~iw~~~~~ 185 (197)
. .......++|+|+++.|+.+... +.|..|++...
T Consensus 185 ~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 185 A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 1 33456789999999977777654 68999998653
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.25 E-value=0.0002 Score=53.56 Aligned_cols=56 Identities=7% Similarity=0.031 Sum_probs=39.0
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~ 190 (197)
.|.++|..+ .+.+..+.. .....+++|+|||+ +++++. .++.|.++|..+.+....
T Consensus 299 ~V~VID~~t-----~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 299 EVTSVTGLV-----GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCC-----CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 455555544 344444422 22468899999999 777776 589999999999877655
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00035 Score=49.79 Aligned_cols=147 Identities=6% Similarity=-0.107 Sum_probs=93.9
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE--
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE-- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-- 97 (197)
...+.++.+.++ |.++++...++.|..++.. ++.. .+... .....+..+++.++++.+++. +..++
T Consensus 103 ~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~---~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 175 (300)
T 2qc5_A 103 DSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD-GTIY-EYDLP---NKGSYPAFITLGSDNALWFTENQNNSIGRITNT 175 (300)
T ss_dssp TCCEEEEEECST--TCEEEEETTTTEEEEECTT-SCEE-EEECS---STTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCCCccceECCC--CCEEEEccCCCeEEEECCC-CCEE-EccCC---CCCCCceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 356889999998 8888887778899999876 3321 11111 123567889999998865432 55565
Q ss_pred --eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
...+. ..+...+..+++.++.-++++....+.|.++|... ......+..+...+.+++++++|++.++...+
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-----EISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-----cEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 22221 12345678888883322225555567899998731 11111223344567899999999977777667
Q ss_pred CcEEEEEcC
Q psy13207 175 GCVRLWKLK 183 (197)
Q Consensus 175 g~i~iw~~~ 183 (197)
+.|..|+..
T Consensus 251 ~~i~~~~~~ 259 (300)
T 2qc5_A 251 NQIGRITND 259 (300)
T ss_dssp TEEEEECTT
T ss_pred CeEEEECCC
Confidence 899999873
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00024 Score=53.84 Aligned_cols=148 Identities=5% Similarity=-0.047 Sum_probs=90.5
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC---CeeeEEEccC-CCcccce-----eE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT---LASCLTWNHS-FSRFNSI-----SI 94 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~-----~~ 94 (197)
....+.+++++|++ +.+++ +..++.|+.||..+.... .+.... ..... +...++|+|+ +..+++. ++
T Consensus 217 ~~~~p~~iav~p~~-g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~-~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 217 FSGKIGAVALDETE-EWLYF-VDSNKNFGRFNVKTQEVT-LIKQLE-LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp SCSCCCBCEECTTS-SEEEE-ECTTCEEEEEETTTCCEE-EEEECC-CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred hcCCcEEEEEeCCC-CeEEE-EECCCcEEEEECCCCCEE-EEeccc-ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 44567899999941 65555 667889999998765421 110000 11111 1238999996 4444332 56
Q ss_pred EEE----eeEecccC---------------CCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCc--
Q psy13207 95 MYE----AHSINAEH---------------KDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDH-- 152 (197)
Q Consensus 95 ~~~----~~~~~~~~---------------~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h-- 152 (197)
.|+ +..+. ++ -.....++++++.-++++-. .++.|+.|+..+ +. +..+.++
T Consensus 293 ~~~~~g~~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~-----G~-v~~~~g~~~ 365 (409)
T 3hrp_A 293 KITPDGECEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD-----GY-VSTVAGQVD 365 (409)
T ss_dssp EECTTCCEEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT-----TE-EEEEEECTT
T ss_pred EEecCCCEEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC-----CE-EEEEeCCCC
Confidence 666 22222 22 13477899983332336666 789999999654 22 2222222
Q ss_pred -------------eecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 153 -------------YCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 153 -------------~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
-.....++++|+|.++++-..++.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 245789999999988888888889988765
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00026 Score=50.08 Aligned_cols=161 Identities=9% Similarity=0.033 Sum_probs=96.0
Q ss_pred ceeeeeeeecCCCc--ceeEEEECCCCCCcEEEEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc
Q psy13207 13 NQWTRRSNLVDSRT--SVTDVKFGPKQLGLVLATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR 88 (197)
Q Consensus 13 ~~w~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (197)
..+++..++ .|.. -...+.|+ + +.++.+.+.+| .|+.+|+.+++.+.+..+.. ......++...+.-+
T Consensus 29 ~~~~vv~~~-phd~~~ftqGL~~~-~--~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~~g~~ly 100 (262)
T 3nol_A 29 YDYQIVHSY-PHDTKAFTEGFFYR-N--GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK----RYFGEGISDWKDKIV 100 (262)
T ss_dssp EEEEEEEEE-ECCTTCEEEEEEEE-T--TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT----TCCEEEEEEETTEEE
T ss_pred cceEEEEEe-cCCCCcccceEEEE-C--CEEEEECCCCCCceEEEEECCCCcEEEEEecCC----ccceeEEEEeCCEEE
Confidence 345555566 3443 35889998 6 88888888876 99999999988765544321 111223343322111
Q ss_pred ccc----eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC----ce-
Q psy13207 89 FNS----ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED----HY- 153 (197)
Q Consensus 89 ~~~----~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~----h~- 153 (197)
.++ .+.+|| +..+. . ...-..+++.+..+ +.+..++.|.++|..+ .+.+..+.- ..
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~ti~-~-~~eG~glt~dg~~L--~~SdGs~~i~~iDp~T-----~~v~~~I~V~~~g~~~ 171 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVRSFN-Y-DGEGWGLTHNDQYL--IMSDGTPVLRFLDPES-----LTPVRTITVTAHGEEL 171 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEE-C-SSCCCCEEECSSCE--EECCSSSEEEEECTTT-----CSEEEEEECEETTEEC
T ss_pred EEEeeCCEEEEEECccCcEEEEEE-C-CCCceEEecCCCEE--EEECCCCeEEEEcCCC-----CeEEEEEEeccCCccc
Confidence 111 267777 44444 2 22234666666655 5555678899999876 333333221 22
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..++.+.|. +|++.+..-.++.|.+.|.++++....+
T Consensus 172 ~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 172 PELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred cccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 335667776 7776655557889999999987754433
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.20 E-value=2.4e-05 Score=58.21 Aligned_cols=89 Identities=10% Similarity=0.038 Sum_probs=59.9
Q ss_pred EEECCCCCCcEEEEEeC-----------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 31 VKFGPKQLGLVLATCAA-----------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
+.|+|+ +..++.+.. +++|.+||+.+.+.+..+
T Consensus 259 ~a~~~d--g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i---------------------------------- 302 (361)
T 2oiz_A 259 VGLHRA--SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI---------------------------------- 302 (361)
T ss_dssp EEEETT--TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE----------------------------------
T ss_pred EEEecC--CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE----------------------------------
Confidence 678887 666655432 348999998876543222
Q ss_pred EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce--eeeeeecCceecEEEEEEccCCC
Q psy13207 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI--ETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~--~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
. .+. ..+++|+++.-+|++++. +.|.+||..+ . +.+..+..+......++++|+|+
T Consensus 303 --~-~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t-----~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 303 --P-GRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ-----PEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp --E-CTT--CCEEEEETTTTEEEEECS-SCEEEEECSS-----SSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred --e-cCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC-----CcceeeEEeccCCCCcEEEEecCCCC
Confidence 2 233 666777632222266665 9999999987 6 77777666666778899999985
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.00013 Score=52.74 Aligned_cols=150 Identities=8% Similarity=-0.053 Sum_probs=85.6
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccc--------
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNS-------- 91 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------- 91 (197)
..+...+.++.++++ |+++++...++.|..|+.. ++. ..+ ...... ...+..++++++|+.+++
T Consensus 82 ~~~~~~~~gl~~d~d--G~l~v~~~~~~~v~~~~~~-g~~-~~~--~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 82 LDATAFTNGNAVDAQ--QRLVHCEHGRRAITRSDAD-GQA-HLL--VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp EESCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-SCE-EEE--ECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred eCCCCccceeeECCC--CCEEEEECCCCEEEEECCC-CCE-EEE--EeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 344567889999998 8877666666889999975 321 111 111111 345678999999987662
Q ss_pred --------------eeEEEEe-----eEecccCCCceeEEEEcCCCeEEEEeeCC------CeEEEEEccCCcccceeee
Q psy13207 92 --------------ISIMYEA-----HSINAEHKDLIHDVAYDYYGLRMATCSSD------QNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 92 --------------~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~s~~~d------~~i~~~d~~~~~~~~~~~~ 146 (197)
.+..|+. ..+. .....+.++|+++.-.|+.+... +.|.+|++...........
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE
Confidence 2344441 1111 12345778998443222444443 7899999864210001111
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
... .......++++++|++.++ +.+ .|.+|+..
T Consensus 234 ~~~--~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~ 266 (305)
T 3dr2_A 234 ASV--PDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD 266 (305)
T ss_dssp ECC--SSSCCCSEEECTTSCEEEC-CSS-EEEEECTT
T ss_pred EEC--CCCCCCeEEECCCCCEEEe-cCC-cEEEECCC
Confidence 111 1233456889999985544 444 48888874
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00087 Score=47.66 Aligned_cols=159 Identities=9% Similarity=0.008 Sum_probs=96.8
Q ss_pred eeeeeeecCCCc--ceeEEEECCCCCCcEEEEEeC--CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc
Q psy13207 15 WTRRSNLVDSRT--SVTDVKFGPKQLGLVLATCAA--DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 15 w~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (197)
+++..++. |.. ....+.|+|+ +.++++.+. ++.|...|+.+++.+....+.. ......+++. ++.+.
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~d--g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~--g~~ly 79 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAEN--DTLFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYFGEGLTLL--NEKLY 79 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECST--TEEEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--TTEEE
T ss_pred ceEEEEEE-CCCCCCcccEEEeCC--CeEEEECCCCCCCEEEEEECCCCCEEEEEecCC----CcceEEEEEe--CCEEE
Confidence 44455553 443 3689999998 877776654 6899999999987665444221 1222344444 33332
Q ss_pred c------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ce---
Q psy13207 91 S------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HY--- 153 (197)
Q Consensus 91 ~------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~--- 153 (197)
. .+.++| +..+..+ ...-..++..+..+ +.+..++.|.++|..+ .+.+..+.- +.
T Consensus 80 v~t~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l--~vs~gs~~l~viD~~t-----~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 80 QVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKIL--YGSDGTSILYEIDPHT-----FKLIKKHNVKYNGHRV 151 (266)
T ss_dssp EEETTCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSE--EEECSSSEEEEECTTT-----CCEEEEEECEETTEEC
T ss_pred EEEecCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEE--EEECCCCeEEEEECCC-----CcEEEEEEECCCCccc
Confidence 1 267777 4444412 12234566666666 5555688999999877 333333321 11
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..++.+.|. +|...+....++.|.+.|..+++....+
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 136788888 7765555556889999999988754443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00019 Score=52.86 Aligned_cols=121 Identities=10% Similarity=0.005 Sum_probs=71.0
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeC-----CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAA-----DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (197)
+|...+.+++++++ ++++++-.. ++.|.+||+.+++.+..+.+.....
T Consensus 64 ~~~~~p~gv~~d~~--g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~------------------------- 116 (343)
T 2qe8_A 64 ITFDTVLGIKSDGN--GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT------------------------- 116 (343)
T ss_dssp CCCSCEEEEEECSS--SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS-------------------------
T ss_pred cceeEeeEEEEcCC--CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc-------------------------
Confidence 35568999999998 877665543 5789999998776443332211000
Q ss_pred eeEecccCCCceeEEEEcC-CCeEEEEee---CCCeEEEEEccCCcccceeeeeeecCc---------------------
Q psy13207 98 AHSINAEHKDLIHDVAYDY-YGLRMATCS---SDQNIKVTRDVMGTRFDIETIGNFEDH--------------------- 152 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~-~~~~~~s~~---~d~~i~~~d~~~~~~~~~~~~~~~~~h--------------------- 152 (197)
.+...+..+++++ ....+++-. .++.|.+||..+.. ....+.+|
T Consensus 117 ------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-----~~r~~~~~~~~~~~~~~~~~~g~~~~~~~ 185 (343)
T 2qe8_A 117 ------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-----AARVLQGYPGIAPEDIDLVIDGVPVQIGQ 185 (343)
T ss_dssp ------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-----EEEECTTCTTTSCCSCCCEETTEECBEEC
T ss_pred ------ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-----EEEEecCCCcccccccceeECCEEEEecc
Confidence 1223445666662 223224444 56788888876421 11111110
Q ss_pred --------eecEEEEEEccCCCEEEEEeCCC-cEEEEE
Q psy13207 153 --------YCTVWRVSWNITGTIVASSGDDG-CVRLWK 181 (197)
Q Consensus 153 --------~~~v~~~~~~p~~~~l~~~~~dg-~i~iw~ 181 (197)
...+..++|+|+|+.|+.+..++ .+..++
T Consensus 186 ~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 186 PDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp TTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 12368899999999888887666 444444
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=0.00012 Score=59.15 Aligned_cols=164 Identities=7% Similarity=-0.089 Sum_probs=92.3
Q ss_pred cccceeeeee--eecCCCcce--eEEEECCCCCCcEEEEEeCCCc-------------EEEEEcCCcccccceeccceec
Q psy13207 10 KCLNQWTRRS--NLVDSRTSV--TDVKFGPKQLGLVLATCAADGL-------------VRIYEAPDVMNLSQWCLQHEVA 72 (197)
Q Consensus 10 ~~~~~w~~~~--~~~~h~~~v--~~~~~~~~~~~~~l~s~~~dg~-------------v~iw~~~~~~~~~~~~~~~~~~ 72 (197)
.++++|++.. .+..+...+ ..+.|+ + ++.|+.++.+.. |++|++.+........ .....
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-D--g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v-~~~~~ 230 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDVKFSGISWL-G--NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLV-FGAIP 230 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEEESCCCEEE-T--TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEE-ESCSG
T ss_pred EEEEEEECCCCCCCccccCCceeccEEEe-C--CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEE-EecCC
Confidence 4566666532 122222233 578899 8 888888877743 9999987754311110 01000
Q ss_pred -cCCCeeeEEEccCCCcccce---------eEEEE-------eeEecccCCCceeEEEEc-CCCeEEEEeeCC---CeEE
Q psy13207 73 -CPTLASCLTWNHSFSRFNSI---------SIMYE-------AHSINAEHKDLIHDVAYD-YYGLRMATCSSD---QNIK 131 (197)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~---------~~~~~-------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d---~~i~ 131 (197)
.......+.|+|++++++.. +.+++ ...+. .+.........+ ++.+++. ...+ +.|.
T Consensus 231 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~~~~~~~~~~g~~l~~~-t~~~~~~~~l~ 308 (693)
T 3iuj_A 231 AQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLDADVSLVDNKGSTLYLL-TNRDAPNRRLV 308 (693)
T ss_dssp GGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSSSCEEEEEEETTEEEEE-ECTTCTTCEEE
T ss_pred CCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCCceEEEEeccCCEEEEE-ECCCCCCCEEE
Confidence 12346788999999987432 45555 23333 344444443223 5555333 3333 6788
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-C--cEEEEEcCC
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-G--CVRLWKLKK 184 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-g--~i~iw~~~~ 184 (197)
.+|+.+..... ...+..|...+. .|+|++++|+....+ + .|.+|++..
T Consensus 309 ~~d~~~~~~~~---~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 309 TVDAANPGPAH---WRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEETTSCCGGG---CEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEeCCCCCccc---cEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 88887532111 123344544444 899999888776654 4 688888764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00021 Score=53.35 Aligned_cols=58 Identities=9% Similarity=0.057 Sum_probs=40.9
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+.++|..+ .+.+..+... .....++|+|||+ ++++.. .+++|.++|+.+.+....++
T Consensus 295 ~~~ViD~~t-----~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 295 NTSSVTASV-----GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEEEEESSS-----CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CEEEEECCC-----CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 445788766 4444444332 2578899999997 556666 59999999999987766554
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00017 Score=54.88 Aligned_cols=37 Identities=0% Similarity=0.060 Sum_probs=31.3
Q ss_pred cEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhhh
Q psy13207 155 TVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 155 ~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~~ 191 (197)
..+.+.|+|||+ ++++.. .++.|.++|+.+.+....+
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 467899999999 888887 5899999999998876654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00077 Score=47.74 Aligned_cols=146 Identities=9% Similarity=-0.030 Sum_probs=90.7
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE-----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE----- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----- 97 (197)
-...+.|+. +.++++.+.+|.|+.+|+.+++.+.+. +.. ......+++..+.-+.++ .+.+||
T Consensus 56 ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~----~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 56 FTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWME-RLG----NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEE-ECT----TCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred ccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC----CcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 357888873 778889999999999999999876554 221 112233444333222221 267777
Q ss_pred -eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ce---ecEEEEEEccCCCEEEEE
Q psy13207 98 -AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HY---CTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 -~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~---~~v~~~~~~p~~~~l~~~ 171 (197)
+..+. . ...-..+++.+..+ +.+..++.|.++|..+ .+.+..+.- +. ..++.+.|. +|++.+..
T Consensus 128 ~~~ti~-~-~~eGwGLt~Dg~~L--~vSdGs~~l~~iDp~T-----~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 128 RERTTR-Y-SGEGWGLCYWNGKL--VRSDGGTMLTFHEPDG-----FALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp EEEEEE-C-SSCCCCEEEETTEE--EEECSSSEEEEECTTT-----CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEEEEe-C-CCceeEEecCCCEE--EEECCCCEEEEEcCCC-----CeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 44444 2 22335666666655 5555688999999877 333333322 11 245677877 77666555
Q ss_pred eCCCcEEEEEcCCCcchhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~ 190 (197)
-.+..|.+.|.++++....
T Consensus 198 w~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp TTCSEEEEECTTTCBEEEE
T ss_pred CCCCeEEEEeCCCCcEEEE
Confidence 5688999999998875443
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0031 Score=44.14 Aligned_cols=157 Identities=10% Similarity=0.043 Sum_probs=94.1
Q ss_pred eeeeeeeecCCC--cceeEEEECCCCCCcEEEEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc
Q psy13207 14 QWTRRSNLVDSR--TSVTDVKFGPKQLGLVLATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 14 ~w~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (197)
.+++..++ .|. .-...+.|++ +.++.+.+.+| .|+.+|+.+++.+.+..+.. ...-..++.. ++.+
T Consensus 8 ~~~v~~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~~--~~~l 77 (243)
T 3mbr_X 8 GYRVVKRY-PHDTTAFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRAEVPP----PYFGAGIVAW--RDRL 77 (243)
T ss_dssp CEEEEEEE-ECCTTCCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--TTEE
T ss_pred ceEEEEEc-CCCCccccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC----CcceeEEEEe--CCEE
Confidence 34555555 454 3467899976 66777777754 99999999988765544322 1111233333 2322
Q ss_pred c------ceeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ce--
Q psy13207 90 N------SISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HY-- 153 (197)
Q Consensus 90 ~------~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~-- 153 (197)
. ..+.+|| +..++ . ...-..+++.+..+ +.+..++.|.++|..+ .+.+..+.- +.
T Consensus 78 y~ltw~~~~v~v~D~~tl~~~~ti~-~-~~~Gwglt~dg~~L--~vSdgs~~l~~iDp~t-----~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATLTPRARFR-Y-PGEGWALTSDDSHL--YMSDGTAVIRKLDPDT-----LQQVGSIKVTAGGRP 148 (243)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEE-C-SSCCCEEEECSSCE--EEECSSSEEEEECTTT-----CCEEEEEECEETTEE
T ss_pred EEEEeeCCEEEEEECCcCcEEEEEe-C-CCCceEEeeCCCEE--EEECCCCeEEEEeCCC-----CeEEEEEEEccCCcc
Confidence 1 1267777 44444 2 22335677766555 5555688999999877 333333322 11
Q ss_pred -ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 154 -CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 154 -~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
..++.+.|. +|+..+..-.+..|.+.|.++++....
T Consensus 149 ~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 149 LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAW 185 (243)
T ss_dssp CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEE
T ss_pred cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEE
Confidence 245667766 676665555678999999998775443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00074 Score=49.73 Aligned_cols=145 Identities=8% Similarity=-0.057 Sum_probs=86.4
Q ss_pred cceeEEEECCCCCCcEEEEEe---CCCcEEEEEcCCcccccceec-------------c-ceec----------cCCCee
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA---ADGLVRIYEAPDVMNLSQWCL-------------Q-HEVA----------CPTLAS 78 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~---~dg~v~iw~~~~~~~~~~~~~-------------~-~~~~----------~~~~~~ 78 (197)
..+..++++|++ +..+++-. .++.|.+||+.+++....... . ..+. -...+.
T Consensus 120 ~~~~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 198 (343)
T 2qe8_A 120 SFVNDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN 198 (343)
T ss_dssp CCCCEEEEETTT-TEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE
T ss_pred cccceEEEecCC-CEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccc
Confidence 456889999852 55566665 688999999986643221110 0 0000 012457
Q ss_pred eEEEccCCCcccce----eEEEEeeE------------------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEcc
Q psy13207 79 CLTWNHSFSRFNSI----SIMYEAHS------------------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~~~~------------------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 136 (197)
.++|+|+++.+..+ -++|.+.. .. ++......++++++..++++...++.|.+||..
T Consensus 199 gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 199 GIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred eeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 89999999876433 25555210 11 223345678888333333777888999999983
Q ss_pred CCcccceeeeeeec-CceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 137 MGTRFDIETIGNFE-DHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 137 ~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
+ ++...... .+.....+++|.++++++++.+..+.+
T Consensus 278 ~-----G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 278 D-----RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp T-----TEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred C-----CCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 3 22211111 124567899999999988887754433
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.6e-06 Score=62.96 Aligned_cols=130 Identities=8% Similarity=-0.060 Sum_probs=62.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-----eeEEEEeeE------ecccCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-----ISIMYEAHS------INAEHKD 107 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~ 107 (197)
+..+++++.||.|+.||..+++.+-.+.. ..+.+..+..++..++. .+..||... .. .+..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~-~~~~ 80 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLP-FTIP 80 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECS-CCHH
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeee-ccCc
Confidence 66889999999999999999876533322 12223333344433332 155565211 11 1100
Q ss_pred -cee-EEEE-cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 108 -LIH-DVAY-DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 108 -~i~-~~~~-~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+. .... ....+ ++++.|+.++.||.++ ++.+-.+..+. ...++|++..+++++.|+.|+.||.++
T Consensus 81 ~~~~~sp~~~~~~~v--~~g~~dg~v~a~D~~t-----G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 81 ELVQASPCRSSDGIL--YMGKKQDIWYVIDLLT-----GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp HHHTTCSCC-----C--CCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSS
T ss_pred cccccCceEecCCEE--EEEeCCCEEEEEECCC-----CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCC
Confidence 010 1111 23445 7788899999999987 44444443332 234567888899999999999999988
Q ss_pred Ccc
Q psy13207 185 KRK 187 (197)
Q Consensus 185 ~~~ 187 (197)
++.
T Consensus 150 G~~ 152 (369)
T 2hz6_A 150 REL 152 (369)
T ss_dssp SSC
T ss_pred CCE
Confidence 764
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0024 Score=47.94 Aligned_cols=137 Identities=5% Similarity=-0.153 Sum_probs=82.0
Q ss_pred EEECCCCCCcEEEEEeC-----CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------------
Q psy13207 31 VKFGPKQLGLVLATCAA-----DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------------- 92 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 92 (197)
....|+ ++.+..... ++.|.+.|..+.+.+.++.. +..+ . +.++|+++++..+
T Consensus 38 ~~~~pd--~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-----G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPD--ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-----GFLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCC--TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-----CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCC--CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-----CCCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 345677 777666654 68999999988765544332 1233 4 9999999986433
Q ss_pred --eEEEE------eeEecccC------CCceeEEEEcCCCeEEEEeeC--CCeEEEEEccCCcccceeeeeeecCceecE
Q psy13207 93 --SIMYE------AHSINAEH------KDLIHDVAYDYYGLRMATCSS--DQNIKVTRDVMGTRFDIETIGNFEDHYCTV 156 (197)
Q Consensus 93 --~~~~~------~~~~~~~~------~~~i~~~~~~~~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v 156 (197)
+.+|| +..+..+. ......++++++.-++..++. ++.|.++|..+ .+.+..+.... .
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t-----~~vv~tI~v~g--~ 181 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-----KAFKRMLDVPD--C 181 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-----TEEEEEEECCS--E
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC-----CcEEEEEECCC--c
Confidence 56777 33332111 124566888844333355553 68999999987 45555543211 1
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 157 WRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 157 ~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
...+....+.+++.+.||++.+.++..
T Consensus 182 -~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 182 -YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp -EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred -ceeecCCCceeEEECCCCCEEEEECCC
Confidence 122222345666667777777777755
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0013 Score=49.41 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=85.8
Q ss_pred EEEECCCCCCcEEEEEe----------CCCcEEEEEcCCcccccceeccc--eeccCCCeeeEEEccCCCcccce-----
Q psy13207 30 DVKFGPKQLGLVLATCA----------ADGLVRIYEAPDVMNLSQWCLQH--EVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 30 ~~~~~~~~~~~~l~s~~----------~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
.+.++|+ |++++.++ .++.|.+||..+.+.+..+.... ..........+.++|+++++..+
T Consensus 82 ~va~spD--G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADD--GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 3999999 88776665 36789999999887655443221 11112356789999999975322
Q ss_pred --eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccC-CcccceeeeeeecCceecE-EEEE
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTV-WRVS 160 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~~~~~~h~~~v-~~~~ 160 (197)
+.++| +..+. . ... ...+. .+.+ ++.+.||.+.+.++.+ ++.. ......+..-..++ ....
T Consensus 160 ~~VsVID~~t~~vv~tI~-v--~g~-~~~~P~g~~~~--~~~~~DG~~~~v~~~~~g~v~-~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLD-V--PDC-YHIFPTAPDTF--FMHCRDGSLAKVAFGTEGTPE-ITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp CEEEEEETTTTEEEEEEE-C--CSE-EEEEEEETTEE--EEEETTSCEEEEECCSSSCCE-EEECCCCSCTTSCBCSCCE
T ss_pred CeEEEEECCCCcEEEEEE-C--CCc-ceeecCCCcee--EEECCCCCEEEEECCCCCeEE-Eeecceeccccccccccce
Confidence 56777 33333 1 111 12233 4445 7888999999999865 2211 00001111111222 1246
Q ss_pred Ec-cCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 161 WN-ITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 161 ~~-p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
|. ++|++++ .+.+|.|++.|+...
T Consensus 233 ~~~~dG~~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 233 YSQKAGRLVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp EETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred eEcCCCcEEE-EeCCCEEEEEECCCC
Confidence 64 6776554 566899999999654
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.0038 Score=47.72 Aligned_cols=152 Identities=14% Similarity=0.179 Sum_probs=89.6
Q ss_pred eeEEEECCCCCCcEEEEEeCC------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------
Q psy13207 28 VTDVKFGPKQLGLVLATCAAD------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------- 92 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 92 (197)
-..+...|+ | +++++..+ |.+.+.|..+.+.+.++...... ......+-|+|+++.+.++
T Consensus 140 Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~--~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 140 LHTVHCGPD--A-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD--QYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEECSS--C-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT--CCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred ccceeECCC--e-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC--ccccceEEECCCCCEEEEccCcCccccc
Confidence 344567888 8 77777665 78999999988776655532110 1223356778877764322
Q ss_pred ---------------eEEEE------eeEeccc-CCCceeEEEE--cCCC-eEEEEee-----CCCeEEEEEccCCcccc
Q psy13207 93 ---------------SIMYE------AHSINAE-HKDLIHDVAY--DYYG-LRMATCS-----SDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 93 ---------------~~~~~------~~~~~~~-~~~~i~~~~~--~~~~-~~~~s~~-----~d~~i~~~d~~~~~~~~ 142 (197)
+.+|| +..+..+ .......+.| +++. ..++++- .++.|.+|..+.+. +.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~ 293 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WN 293 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-ee
Confidence 67888 3344411 1234566767 5433 2234454 66788776654321 11
Q ss_pred eeeeeeecCc----------------eecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCC
Q psy13207 143 IETIGNFEDH----------------YCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKK 185 (197)
Q Consensus 143 ~~~~~~~~~h----------------~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~ 185 (197)
...+..+... ......+.++|||++|.++. ..+.|.+||+...
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 1111111110 13467899999999998876 4689999998643
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0014 Score=48.93 Aligned_cols=121 Identities=16% Similarity=0.015 Sum_probs=69.2
Q ss_pred ECCCCCCcEEEEEeC--CC---cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCC
Q psy13207 33 FGPKQLGLVLATCAA--DG---LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKD 107 (197)
Q Consensus 33 ~~~~~~~~~l~s~~~--dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (197)
..|+ ++++..... .+ +|.++|..+.+.+. .++..... .+.++|+++++..+-..
T Consensus 28 ~~~~--~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~------~i~~g~~p-~i~~spDg~~lyv~n~~------------ 86 (373)
T 2mad_H 28 PGAD--GRRSYINLPAHHSAIIQQWVLDAGSGSILG------HVNGGFLP-NPVAAHSGSEFALASTS------------ 86 (373)
T ss_pred CCCC--CCEEEEeCCcccCCccEEEEEECCCCeEEE------EecCCCCC-CeEECCCCCEEEEEecc------------
Confidence 3455 666666553 33 88999998775432 22222222 66666666553221000
Q ss_pred ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEEeC--CCcEE
Q psy13207 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASSGD--DGCVR 178 (197)
Q Consensus 108 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~ 178 (197)
.... .-+..++.|.+||..+ .+.+..+... ......+.|+|||++|+.+.. +++|.
T Consensus 87 --------~~~~--~rg~~~~~v~viD~~t-----~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~ 151 (373)
T 2mad_H 87 --------FSRI--AKGKRTDYVEVFDPVT-----FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVG 151 (373)
T ss_pred --------cccc--ccCCCCCeEEEEECCC-----CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEE
Confidence 0000 1122467889999876 3333332111 123457999999999998874 57899
Q ss_pred EEEcCCCcchhh
Q psy13207 179 LWKLKKKRKKKK 190 (197)
Q Consensus 179 iw~~~~~~~~~~ 190 (197)
++| .+++....
T Consensus 152 viD-~t~~~~~~ 162 (373)
T 2mad_H 152 LVV-QGGSSDDQ 162 (373)
T ss_pred EEE-CCCCEEeE
Confidence 999 88765544
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0068 Score=49.59 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=79.4
Q ss_pred CCCc-ceeEEEEC-CCCCCcEEEEE-eCCC----cEEEEEcCCc-ccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 23 DSRT-SVTDVKFG-PKQLGLVLATC-AADG----LVRIYEAPDV-MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 23 ~h~~-~v~~~~~~-~~~~~~~l~s~-~~dg----~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
+|.- .+...+|+ |+ |++||-+ +.+| +|+++|+.++ +.+.. .+ ......+.|+|+++.|+..
T Consensus 170 ~~~~~~~~~~~~S~PD--G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----~~--~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPE--HDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----KV--SGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp TCSCCEEEEEEECTTT--TCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----CE--EEECSCCEECSSTTEEEEEEE
T ss_pred CCCeEEEeeeEecCCC--CCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----cc--cCceeeEEEecCCCEEEEEEE
Confidence 4443 67889999 99 8877644 3333 5999999887 53211 11 1124578999999876432
Q ss_pred ------eEEE--Ee--------eEecccCCCceeEEEEc--CCCeEEEEee-CCCeEEEEEccCCcccceee--eeeecC
Q psy13207 93 ------SIMY--EA--------HSINAEHKDLIHDVAYD--YYGLRMATCS-SDQNIKVTRDVMGTRFDIET--IGNFED 151 (197)
Q Consensus 93 ------~~~~--~~--------~~~~~~~~~~i~~~~~~--~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~--~~~~~~ 151 (197)
..+| ++ ..+..........+.|+ +..+.+.+.. ....|.++|+.+.. ... ......
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~---~~~~~~~l~~~ 317 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN---AHNTLEIVRPR 317 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT---TCCCEEESSCC
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC---CCceeEEeecC
Confidence 1333 31 11111122334567788 4444332222 24567778876521 111 111222
Q ss_pred ceecEEEEEEccCCCEEEEEeCC--C--cEEEEEcCCCcchh
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDD--G--CVRLWKLKKKRKKK 189 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~d--g--~i~iw~~~~~~~~~ 189 (197)
.....+.+.|+..+.+++.+..+ + .|..+++.+.+.|+
T Consensus 318 ~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~ 359 (751)
T 2xe4_A 318 EKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWS 359 (751)
T ss_dssp CTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCC
T ss_pred CCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccce
Confidence 33445556655444444444333 3 45556665433444
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.019 Score=43.87 Aligned_cols=138 Identities=10% Similarity=-0.027 Sum_probs=79.4
Q ss_pred eeEEEECCCCCCcEEEEEe-------------------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEE--ccCC
Q psy13207 28 VTDVKFGPKQLGLVLATCA-------------------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW--NHSF 86 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~-------------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 86 (197)
-..+.|+|+ ++.+++.. .+.+|.+||+.+.+.+.++.+.. .......+.| +|++
T Consensus 190 ~Yd~~~~p~--~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~---~g~~P~~i~f~~~Pdg 264 (462)
T 2ece_A 190 AYDFWWNLP--NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE---ENRMALELRPLHDPTK 264 (462)
T ss_dssp CCCEEEETT--TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---TEEEEEEEEECSSTTC
T ss_pred cceEEECCC--CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---CCCccceeEeeECCCC
Confidence 345788998 88888874 37899999998765444333210 0122344545 8888
Q ss_pred Ccccce-----------eEEEE--------eeE--ecc----c-----------CCCceeEEEEcCC-CeEEEEeeCCCe
Q psy13207 87 SRFNSI-----------SIMYE--------AHS--INA----E-----------HKDLIHDVAYDYY-GLRMATCSSDQN 129 (197)
Q Consensus 87 ~~~~~~-----------~~~~~--------~~~--~~~----~-----------~~~~i~~~~~~~~-~~~~~s~~~d~~ 129 (197)
++...+ +.+|. ... +.. . -......|.++++ .++.++.-..+.
T Consensus 265 ~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~ 344 (462)
T 2ece_A 265 LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE 344 (462)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE
T ss_pred CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE
Confidence 764322 22211 111 110 0 0244678888833 333355556789
Q ss_pred EEEEEccCCcccceeeeeeecCc-----------e---ecEEEEEEccCCCEEEEEe
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDH-----------Y---CTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h-----------~---~~v~~~~~~p~~~~l~~~~ 172 (197)
|.+||+... ...+.+..+... . ..-..+.++|||++|+++.
T Consensus 345 VavfdV~d~--~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 345 VRQYDISNP--FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECSST--TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEecCC--CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999998532 112333333221 0 1247799999999999887
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00097 Score=50.78 Aligned_cols=119 Identities=11% Similarity=-0.074 Sum_probs=71.6
Q ss_pred CcEEEEEeC-C----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEE
Q psy13207 39 GLVLATCAA-D----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVA 113 (197)
Q Consensus 39 ~~~l~s~~~-d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 113 (197)
+..++.... + +.|.+.|..+.+.+.++... ..+ .+.++|+++++..+-..
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-----~~P--gia~SpDgk~lyVan~~------------------ 138 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-----FLP--HPVAAEDGSFFAQASTV------------------ 138 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-----SSC--EEEECTTSSCEEEEEEE------------------
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-----CCC--ceEECCCCCEEEEEecc------------------
Confidence 555544443 3 69999999887655433321 222 67777777654321000
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEEeC--CCcEEEEEcCC
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASSGD--DGCVRLWKLKK 184 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~iw~~~~ 184 (197)
.... ..|..++.|.++|..+ .+.+..+.-- ......+.++|||++++.+.. +++|.+.|+.+
T Consensus 139 --~~~~--~~G~~~~~VsviD~~t-----~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 139 --FERI--ARGKRTDYVEVFDPVT-----FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp --EEET--TEEEEEEEEEEECTTT-----CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred --cccc--ccCCCCCEEEEEECCC-----CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 0000 1233567899999977 3444333210 122356899999999998874 57899999998
Q ss_pred Ccchhhh
Q psy13207 185 KRKKKKE 191 (197)
Q Consensus 185 ~~~~~~~ 191 (197)
.+....+
T Consensus 210 ~kvv~~I 216 (426)
T 3c75_H 210 KTFDRML 216 (426)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 7765444
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0017 Score=51.23 Aligned_cols=111 Identities=10% Similarity=-0.019 Sum_probs=70.6
Q ss_pred CCCeeeEEEccCCCcccce------eEEEEeeEe----------------cccCCCceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 74 PTLASCLTWNHSFSRFNSI------SIMYEAHSI----------------NAEHKDLIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
.....++.++|||+++..+ +.++|+... ...-....+.++|+++....++.-.|+.|.
T Consensus 276 g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 276 ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 4567899999999987554 788883321 112235678899996555446777899999
Q ss_pred EEEccCCcc-----cceeeeeeecCceecE-----EEEEEccCCCEEEEEeC---CCcE----------EEEEcCC
Q psy13207 132 VTRDVMGTR-----FDIETIGNFEDHYCTV-----WRVSWNITGTIVASSGD---DGCV----------RLWKLKK 184 (197)
Q Consensus 132 ~~d~~~~~~-----~~~~~~~~~~~h~~~v-----~~~~~~p~~~~l~~~~~---dg~i----------~iw~~~~ 184 (197)
+||+..... .....+..+..|..+- ..+.++|||++|+++.. |..+ .++|+..
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 999864100 0023444554443321 23356899999998753 4321 7888843
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.033 Score=42.46 Aligned_cols=144 Identities=6% Similarity=-0.003 Sum_probs=82.2
Q ss_pred ceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----------eEE
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----------SIM 95 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 95 (197)
....++++| + +..|..+...+.|+.+|+....... + .........++|+++++++..+ +..
T Consensus 138 ~P~~lavdp~~--~g~Lyv~d~~~~I~~id~~~~~v~~-~-----~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKN--HNHLYLVGEQHPTRLIDFEKEYVST-V-----YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTE--EEEEEEEEBTEEEEEEETTTTEEEE-E-----ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCC--CCeEEEEeCCCcEEEEECCCCEEEE-E-----ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 456788997 4 4445555554788888887653211 1 1124567889999999844222 111
Q ss_pred EE----e---eEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE----A---HSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~----~---~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
++ . ..+. .......+++++ +..++++-...+.|..++..... ...+..... ......++|+|+|++
T Consensus 210 ~~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~~~-~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 210 LTRESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTIQD-SGWEFHIQFHPSGNY 283 (430)
T ss_dssp EEGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEECSS-SSCCEEEEECTTSSE
T ss_pred EeCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEcCC-CCcceeEEEcCCCCE
Confidence 22 1 1111 123345666764 33333555567788888876421 111222221 234578999999994
Q ss_pred -EEEEeCCCcEEEEEcCC
Q psy13207 168 -VASSGDDGCVRLWKLKK 184 (197)
Q Consensus 168 -l~~~~~dg~i~iw~~~~ 184 (197)
.++-...+.|..++.+.
T Consensus 284 lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEETTTTEEEEEEEET
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 45555678899988763
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.053 Score=38.50 Aligned_cols=135 Identities=10% Similarity=0.003 Sum_probs=82.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEeccc-CC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAE-HK 106 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~-~~ 106 (197)
++..++.-.++.+.++|..+.+.+.++... .-....++++++.+..+ +.++| +..+..+ +.
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-------~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-------MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG 148 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTEEEEEEECC-------SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred CEEEEEEecCCEEEEEECCCCcEEEEEECC-------CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC
Confidence 455566667899999999987766554322 01123355566665433 56666 2232211 11
Q ss_pred ---CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------------eecEEEEEEccCCC-EEE
Q psy13207 107 ---DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------------YCTVWRVSWNITGT-IVA 169 (197)
Q Consensus 107 ---~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------------~~~v~~~~~~p~~~-~l~ 169 (197)
..++.+.|....+ ++....++.|.+.|..+ ++.+..+.-. ....+.++|+|+++ +++
T Consensus 149 ~p~~~~nele~~dg~l-yvn~~~~~~V~vID~~t-----g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 149 HRVIRLNELEYINGEV-WANIWQTDCIARISAKD-----GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EECCCEEEEEEETTEE-EEEETTSSEEEEEETTT-----CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred cccccceeEEEECCEE-EEecCCCCeEEEEECCC-----CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 2356777773223 25555678999999987 4444444321 13568999999875 555
Q ss_pred EEeCCCcEEEEEcCCCc
Q psy13207 170 SSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~ 186 (197)
++...+.+...++....
T Consensus 223 Tgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 223 TGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EETTCSEEEEEEEEECC
T ss_pred ECCCCCeEEEEEEeccc
Confidence 56678899998886543
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.037 Score=39.82 Aligned_cols=140 Identities=11% Similarity=-0.020 Sum_probs=78.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEEE---
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE--- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--- 97 (197)
...+.++...++ +.+++.. +.|..+| .+++..-... .....+.++...+++...+.+ +..++
T Consensus 176 ~~~~~~~~~d~~--g~l~v~t---~~l~~~d-~~g~~~~~~~-----~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 176 DAITSAASIGKD--GTIYFGS---DKVYAIN-PDGTEKWNFY-----AGYWTVTRPAISEDGTIYVTSLDGHLYAINPDG 244 (330)
T ss_dssp SCCCSCCEECTT--CCEEEES---SSEEEEC-TTSCEEEEEC-----CSSCCCSCCEECTTSCEEEEETTTEEEEECTTS
T ss_pred CCceeeeEEcCC--CEEEEEe---CEEEEEC-CCCcEEEEEc-----cCCcceeceEECCCCeEEEEcCCCeEEEECCCC
Confidence 344566666665 6655443 7888888 5543321111 113456777777776654432 44444
Q ss_pred --eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
+..+. .....+..+... ...+ ..++.++.+..+|. + .+.+..+......+.++...++|+ |..++.+
T Consensus 245 ~~~~~~~-~~~~~~~~~~~~~~g~l--~v~t~~ggl~~~d~-~-----g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~ 314 (330)
T 3hxj_A 245 TEKWRFK-TGKRIESSPVIGNTDTI--YFGSYDGHLYAINP-D-----GTEKWNFETGSWIIATPVIDENGT-IYFGTRN 314 (330)
T ss_dssp CEEEEEE-CSSCCCSCCEECTTSCE--EEECTTCEEEEECT-T-----SCEEEEEECSSCCCSCCEECTTCC-EEEECTT
T ss_pred CEeEEee-CCCCccccceEcCCCeE--EEecCCCCEEEECC-C-----CcEEEEEEcCCccccceEEcCCCE-EEEEcCC
Confidence 22222 222223344455 5556 67888888888885 3 233333333344566777777876 5568889
Q ss_pred CcEEEEEcCCC
Q psy13207 175 GCVRLWKLKKK 185 (197)
Q Consensus 175 g~i~iw~~~~~ 185 (197)
|.+++...+..
T Consensus 315 G~~~~~~~~~~ 325 (330)
T 3hxj_A 315 GKFYALFNLEH 325 (330)
T ss_dssp SCEEEEEC---
T ss_pred CeEEEEecccc
Confidence 99998876543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0035 Score=46.77 Aligned_cols=54 Identities=11% Similarity=-0.079 Sum_probs=38.0
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEEeC--CCcEEE--EEcCC
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASSGD--DGCVRL--WKLKK 184 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~i--w~~~~ 184 (197)
.++.|.+||..+ .+.+..+... ......++++|||++++.+.. +..+.+ +|..+
T Consensus 94 ~~~~VsviD~~T-----~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 94 RTDYVEVFDPVT-----FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEEEECTTT-----CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCEEEEEECCC-----CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 478899999987 4555554321 022457999999999988864 457888 88865
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.085 Score=37.29 Aligned_cols=120 Identities=8% Similarity=0.082 Sum_probs=69.7
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecc-cCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINA-EHK 106 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~-~~~ 106 (197)
+++.+..-.++.+.++|..+.+.+.++.... ....+++++..+..+ +.++| +..+.. ...
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~--------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG--------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECSS--------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT
T ss_pred CEEEEEEeeCCEEEEEECccCcEEEEEECCC--------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 3444555568999999999887665554321 222333455554322 56666 223221 111
Q ss_pred ---CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC------------ceecEEEEEEccCCCEEEE
Q psy13207 107 ---DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED------------HYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 107 ---~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~------------h~~~v~~~~~~p~~~~l~~ 170 (197)
..++.+.|. +..+ +..-.++.|.+.|.++ ++.+..+.. -....+.++|+|+++.|..
T Consensus 169 ~~~~~lNELe~~~G~ly--an~w~~~~I~vIDp~t-----G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 169 EELPELNELEWVDGEIF--ANVWQTNKIVRIDPET-----GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp EECCCEEEEEEETTEEE--EEETTSSEEEEECTTT-----CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred ccccccceeEEECCEEE--EEEccCCeEEEEECCC-----CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 334567777 4333 6666788999999987 333333221 0234589999998777776
Q ss_pred EeC
Q psy13207 171 SGD 173 (197)
Q Consensus 171 ~~~ 173 (197)
.+.
T Consensus 242 TGK 244 (262)
T 3nol_A 242 TGK 244 (262)
T ss_dssp EET
T ss_pred ECC
Confidence 664
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.11 Score=36.70 Aligned_cols=127 Identities=7% Similarity=0.082 Sum_probs=72.2
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEe
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEA 98 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (197)
+.+.+-...+..++|+|+. +.++++...++.|...|+. ++.++.+.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~-~~L~aV~d~~~~I~~ld~~-g~v~~~i~l------------------------------- 66 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQS-NTLFSTINKPAAIVEMTTN-GDLIRTIPL------------------------------- 66 (255)
T ss_dssp EECTTCCSCEEEEEEETTT-TEEEEEEETTEEEEEEETT-CCEEEEEEC-------------------------------
T ss_pred eECCCcccCcceeEEeCCC-CEEEEEECCCCeEEEEeCC-CCEEEEEec-------------------------------
Confidence 3567777789999999972 4566667788888888876 443322211
Q ss_pred eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc-eeeee-ee--cCceecEEEEEEccCCCEEEEEeCC
Q psy13207 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD-IETIG-NF--EDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~-~~~~~-~~--~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
.-......|++.++..++++.-.++.+.++++....... ..... .+ ...+...-.++|+|.++.|.++...
T Consensus 67 -----~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~ 141 (255)
T 3qqz_A 67 -----DFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK 141 (255)
T ss_dssp -----SSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES
T ss_pred -----CCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc
Confidence 111234455555322222443345667777665421100 01110 11 1224456899999998777777766
Q ss_pred CcEEEEEcC
Q psy13207 175 GCVRLWKLK 183 (197)
Q Consensus 175 g~i~iw~~~ 183 (197)
....+|.++
T Consensus 142 ~p~~i~~~~ 150 (255)
T 3qqz_A 142 NPIEVYKVN 150 (255)
T ss_dssp SSEEEEEEE
T ss_pred CCceEEEEc
Confidence 566666654
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.002 Score=48.03 Aligned_cols=63 Identities=11% Similarity=0.046 Sum_probs=38.8
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+..+ ++++.|+.|+.||..+ ++.+-.+.. ..+.+..+.+++..+++++.||.|+.||..+++.
T Consensus 9 ~~~v--~~gs~dg~v~a~d~~t-----G~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 9 ETLL--FVSTLDGSLHAVSKRT-----GSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp TTEE--EEEETTSEEEEEETTT-----CCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred CCEE--EEEcCCCEEEEEECCC-----CCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 4556 8899999999999977 444444433 3444445556787888888999999999987654
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.088 Score=37.82 Aligned_cols=138 Identities=8% Similarity=-0.080 Sum_probs=77.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc--eeEEEE-----e
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS--ISIMYE-----A 98 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~ 98 (197)
..+.++...++ +. +..++.++.|..+|.. ++....+.. ....+.++...+++..++. ++..++ +
T Consensus 137 ~~~~~~~~~~~--g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-----~~~~~~~~~~d~~g~l~v~t~~l~~~d~~g~~~ 207 (330)
T 3hxj_A 137 AIYATPIVSED--GT-IYVGSNDNYLYAINPD-GTEKWRFKT-----NDAITSAASIGKDGTIYFGSDKVYAINPDGTEK 207 (330)
T ss_dssp CCCSCCEECTT--SC-EEEECTTSEEEEECTT-SCEEEEEEC-----SSCCCSCCEECTTCCEEEESSSEEEECTTSCEE
T ss_pred ceeeeeEEcCC--CE-EEEEcCCCEEEEECCC-CCEeEEEec-----CCCceeeeEEcCCCEEEEEeCEEEEECCCCcEE
Confidence 34555666665 65 5567778999999987 543322221 1234555666666655432 244444 1
Q ss_pred eEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 99 HSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
.... .....+.++...++ .+ ..++.++.+..+|.. ...+..+......+..+...+++. |..++.+|.+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~g~l--~v~t~~~gl~~~~~~------g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl 277 (330)
T 3hxj_A 208 WNFY-AGYWTVTRPAISEDGTI--YVTSLDGHLYAINPD------GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHL 277 (330)
T ss_dssp EEEC-CSSCCCSCCEECTTSCE--EEEETTTEEEEECTT------SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEE
T ss_pred EEEc-cCCcceeceEECCCCeE--EEEcCCCeEEEECCC------CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCE
Confidence 1222 23345667777743 56 667778888888753 223333332222333455565665 6667778889
Q ss_pred EEEEc
Q psy13207 178 RLWKL 182 (197)
Q Consensus 178 ~iw~~ 182 (197)
..+|.
T Consensus 278 ~~~d~ 282 (330)
T 3hxj_A 278 YAINP 282 (330)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99985
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.036 Score=44.81 Aligned_cols=58 Identities=14% Similarity=0.054 Sum_probs=41.3
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+.|..||..+ ++.+-.+. +..+++...+..++.+++.++.||.+++||.++++.+..
T Consensus 456 ~g~l~A~D~~t-----G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 456 FGRLLAWDPVA-----QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp EEEEEEEETTT-----TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccEEEEEeCCC-----CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence 37899999977 34433332 223344555667788899999999999999999876543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.14 Score=36.11 Aligned_cols=148 Identities=7% Similarity=0.025 Sum_probs=86.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc---cceecc-ceeccCCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL---SQWCLQ-HEVACPTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
..-.+++.++ +.++++.-.++.+.++++.....+ ...... ...........++|+|.+..|..+ ..+|.
T Consensus 71 D~EGIa~~~~--g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 71 DLETIEYIGD--NQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp SEEEEEECST--TEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred ChHHeEEeCC--CEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 4567778877 777677667788999988655421 111111 011235568999999998765433 24444
Q ss_pred ee---------Eec------ccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-Cc------ee
Q psy13207 98 AH---------SIN------AEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DH------YC 154 (197)
Q Consensus 98 ~~---------~~~------~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h------~~ 154 (197)
.. .+. ..+...+.+++++ ...-+++.....+.+..+|.... ......+. +. -.
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----~~~~~~L~~g~~~l~~~~~ 224 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----VIGEMSLTKGSRGLSHNIK 224 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECSTTGGGCSSCCC
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----EEEEEEcCCccCCcccccC
Confidence 21 111 0123457889998 22222266667788888997631 11222232 11 12
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
.--.++|.|+|++.++ +.-+.++.|.
T Consensus 225 qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 225 QAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp SEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 4588999999985554 6666666654
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.071 Score=43.20 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=40.5
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+|.|..||+.+ ++.+-.+..+ .++....+...+.+++.++.||.++.||.++++.+
T Consensus 454 ~g~l~A~D~~t-----G~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 454 SGKLIAWDPVK-----QQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEEETTT-----TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceeEEEEECCC-----CCeEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 58899999987 4444443322 22333456667889999999999999999998764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.24 Score=39.83 Aligned_cols=76 Identities=7% Similarity=-0.073 Sum_probs=45.3
Q ss_pred eeEEEEc--CCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CC-----CcEEE
Q psy13207 109 IHDVAYD--YYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DD-----GCVRL 179 (197)
Q Consensus 109 i~~~~~~--~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~d-----g~i~i 179 (197)
..++++. +..+ +.|+ .+..+.+||..+.+ ...+..+..... -.+++..++|++++.|+ .+ ..+.+
T Consensus 245 ~~~~~~~~~g~ly--v~GG~~~~~v~~yd~~t~~---W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 245 CPGISMDGNGQIV--VTGGNDAKKTSLYDSSSDS---WIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp SCEEEECTTSCEE--EECSSSTTCEEEEEGGGTE---EEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred cccccCCCCCCEE--EeCCCCCCceEEecCcCCc---eeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceE
Confidence 3345554 3333 6666 45689999987632 233333322111 13455667999999998 44 56999
Q ss_pred EEcCCCcchhhh
Q psy13207 180 WKLKKKRKKKKE 191 (197)
Q Consensus 180 w~~~~~~~~~~~ 191 (197)
||..+. .|..+
T Consensus 319 yd~~t~-~W~~~ 329 (656)
T 1k3i_A 319 YSPSSK-TWTSL 329 (656)
T ss_dssp EETTTT-EEEEE
T ss_pred eCCCCC-cceeC
Confidence 999764 45543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.17 Score=36.48 Aligned_cols=141 Identities=11% Similarity=-0.016 Sum_probs=76.2
Q ss_pred ceeEEEECC-CCCCcEEEEEeC-----------------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAA-----------------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR 88 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~-----------------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (197)
....+.+.| + |++.++-.. ++.|..+|..+++... + .. .......++++|+++.
T Consensus 127 ~p~~i~~d~~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~--~~---~~~~p~gia~~~dg~~ 198 (322)
T 2fp8_A 127 WLYAVTVDQRT--GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL-L--LK---ELHVPGGAEVSADSSF 198 (322)
T ss_dssp CEEEEEECTTT--CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE-E--EE---EESCCCEEEECTTSSE
T ss_pred ccceEEEecCC--CEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE-e--cc---CCccCcceEECCCCCE
Confidence 357788888 7 776665432 3667777765543211 0 11 1134567899999885
Q ss_pred ccce------eEEEEee--------EecccCCCceeEEEEcCC-CeEEEEeeC----------CCeEEEEEccCCcccce
Q psy13207 89 FNSI------SIMYEAH--------SINAEHKDLIHDVAYDYY-GLRMATCSS----------DQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 89 ~~~~------~~~~~~~--------~~~~~~~~~i~~~~~~~~-~~~~~s~~~----------d~~i~~~d~~~~~~~~~ 143 (197)
+..+ +..|++. .+. .... ...+++.++ .++ ++... .+.|..+|.. +
T Consensus 199 lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~gi~~d~~G~l~-va~~~~~~~~~~~~~~~~v~~~d~~------G 269 (322)
T 2fp8_A 199 VLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PGNIKRNADGHFW-VSSSEELDGNMHGRVDPKGIKFDEF------G 269 (322)
T ss_dssp EEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EEEEEECTTSCEE-EEEEEETTSSTTSCEEEEEEEECTT------S
T ss_pred EEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CCCeEECCCCCEE-EEecCcccccccCCCccEEEEECCC------C
Confidence 4322 5566521 111 1112 567777722 232 44333 4567777754 3
Q ss_pred eeeeeecCc----eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 144 ETIGNFEDH----YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 144 ~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+.+..+... ...+..+++ .++++.++...++.|..+++...
T Consensus 270 ~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 270 NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 333333221 234556666 46776666667889999998643
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.2 Score=35.07 Aligned_cols=147 Identities=6% Similarity=-0.101 Sum_probs=84.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------eeEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ISIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--- 97 (197)
.+.+++|+|++ +.++++-..++.|..+++...... .+. . ........+++++++..+.. .+.+++
T Consensus 37 ~~~gi~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~-~~~-~---~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 37 VIIGLAFDCVD-KVVYWTDISEPSIGRASLHGGEPT-TII-R---QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEETTT-TEEEEEETTTTEEEEEESSSCCCE-EEE-C---TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cEEEEEEecCC-CEEEEEECCCCEEEEEecCCCCcE-EEE-E---CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 46789999861 555666667789999998754321 110 0 11246788999987654432 255555
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeC--CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE-EE
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSS--DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA-SS 171 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~ 171 (197)
...+..........+++++ ...++++... .+.|..++..... ...+ ..........++++|++..|+ +.
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~--~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRIL--AQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEE--ECTTCSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEE--EECCCCCCcEEEEcCCCCEEEEEE
Confidence 1122102224567888884 3322244332 4688888875310 1111 112223568899999876554 44
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
...+.|..+++..
T Consensus 186 ~~~~~I~~~~~~g 198 (267)
T 1npe_A 186 AGTHRAECLNPAQ 198 (267)
T ss_dssp TTTTEEEEEETTE
T ss_pred CCCCEEEEEecCC
Confidence 5668899999864
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.22 Score=34.77 Aligned_cols=120 Identities=8% Similarity=0.027 Sum_probs=70.1
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecc-cCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINA-EHK 106 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~-~~~ 106 (197)
+++.+..-.++.+.++|..+.+.+.++... . ....+.+++..|..+ +.++| +..+.. .+.
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~------~--~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYP------G--EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECS------S--CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCC------C--CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 445556667899999999988766555432 1 122333455554333 66666 233321 111
Q ss_pred ---CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-------------ceecEEEEEEccCCCEEE
Q psy13207 107 ---DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-------------HYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 107 ---~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~ 169 (197)
..++.+.|. +..+ +....+..|.+.|.+++ +.+..+.. -..-.+.|+++|+++.|.
T Consensus 147 ~~~~~lNeLe~~~G~ly--anvw~s~~I~vIDp~tG-----~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELL--ANVWLTSRIARIDPASG-----KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp EECCCEEEEEEETTEEE--EEETTTTEEEEECTTTC-----BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred cccccceeeEEeCCEEE--EEECCCCeEEEEECCCC-----CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 345667776 4433 55556789999999873 33333221 123568999999876665
Q ss_pred EEeC
Q psy13207 170 SSGD 173 (197)
Q Consensus 170 ~~~~ 173 (197)
..+.
T Consensus 220 VTGK 223 (243)
T 3mbr_X 220 VTGK 223 (243)
T ss_dssp EEET
T ss_pred EECC
Confidence 5553
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.16 Score=37.47 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=62.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCce-eEEEEcCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLI-HDVAYDYY 117 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~ 117 (197)
+..++.++.++.|..+|..+++.+-.+...... .. . . .....+ ..+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~----~~-------~----------------~-~~~~~~~~~~~~~~~ 104 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKD----GW-------F----------------S-KEPALLSGGVTVSGG 104 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-------C-------C----------------S-CCCCCEEEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCcccc----cc-------c----------------c-ccCcccccCceEeCC
Confidence 456777888999999999887643211110000 00 0 0 001112 22333356
Q ss_pred CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 118 GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 118 ~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+ +.++.++.|..+|.+++ +.+-.............. .+..++.++.++.+..+|.++++.
T Consensus 105 ~v--~v~~~~g~l~a~d~~tG-----~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 105 HV--YIGSEKAQVYALNTSDG-----TVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAV 165 (376)
T ss_dssp EE--EEEETTSEEEEEETTTC-----CEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred EE--EEEcCCCEEEEEECCCC-----CEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcE
Confidence 66 77888999999998763 333222211111111112 245777888899999999988764
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.31 Score=35.11 Aligned_cols=146 Identities=9% Similarity=-0.035 Sum_probs=79.3
Q ss_pred ceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEcc-CCCcccc-----------
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNH-SFSRFNS----------- 91 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~----------- 91 (197)
.+.++++.+ + ++++++ ...+.+..+|..++.. ..+. ..... ......+++.+ +++.+++
T Consensus 81 ~p~gi~~~~~~--g~l~v~-d~~~~i~~~d~~~g~~-~~~~--~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 81 RTYDISYNLQN--NQLYIV-DCYYHLSVVGSEGGHA-TQLA--TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp CEEEEEEETTT--TEEEEE-ETTTEEEEECTTCEEC-EEEE--SEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred CCceEEEcCCC--CcEEEE-ECCCCEEEEeCCCCEE-EEec--ccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 467899987 5 655544 4445577888665421 1111 11111 23467788888 8865542
Q ss_pred -----------eeEEEE-----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee
Q psy13207 92 -----------ISIMYE-----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154 (197)
Q Consensus 92 -----------~~~~~~-----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~ 154 (197)
.+..|+ +..+. ......+.|+++++. .++++-...+.|.+|++........+....+. .
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---g 230 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---N 230 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---S
T ss_pred ceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---C
Confidence 144444 11111 112345678888442 22244456789999998642111112222222 2
Q ss_pred cEEEEEEccCCCEEEEEeC----------CCcEEEEEcC
Q psy13207 155 TVWRVSWNITGTIVASSGD----------DGCVRLWKLK 183 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~----------dg~i~iw~~~ 183 (197)
...+++.++|++.++... .+.|..+|..
T Consensus 231 -P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 231 -PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp -EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred -CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 577899999987776644 3567777653
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.069 Score=39.44 Aligned_cols=126 Identities=8% Similarity=-0.082 Sum_probs=65.7
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE------eeEecccCCCc
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE------AHSINAEHKDL 108 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~ 108 (197)
+..+..++.++.+..+|..+++.+-...... ...+... ++..++. .+..+| +-.........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-------~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~ 310 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGS-------VNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL 310 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCC-------EEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCC-------CCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc
Confidence 4567777889999999998887653332111 1112211 1111111 133333 00111011122
Q ss_pred eeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE-EEEccCCCEEEEEeCCCcEEEEE
Q psy13207 109 IHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR-VSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 109 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
+......+..+ +.++.+|.+.++|.++ ++.+.........+.. ... .+..|+.++.+|.|..|+
T Consensus 311 ~~~~~~~~~~l--~v~~~~g~l~~~d~~t-----G~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 311 LTSPVLYNGNL--VVGDSEGYLHWINVED-----GRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCCCEEETTEE--EEECTTSEEEEEETTT-----CCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ccCCEEECCEE--EEEeCCCeEEEEECCC-----CcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 22333345666 7888899999999877 4444333321122211 111 245788888999999987
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.62 Score=37.01 Aligned_cols=150 Identities=8% Similarity=-0.046 Sum_probs=87.7
Q ss_pred cceeEEEE-C-CCCCCcEEEEEe------------------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC
Q psy13207 26 TSVTDVKF-G-PKQLGLVLATCA------------------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS 85 (197)
Q Consensus 26 ~~v~~~~~-~-~~~~~~~l~s~~------------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (197)
.....+++ . |+ +.+++.++ .++.+.+.|..+.+...++.. ......++.+|+
T Consensus 134 ~~phg~~~~~~p~--~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V------gg~pd~~~~spd 205 (595)
T 1fwx_A 134 KGIHGLRPQKWPR--SNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV------SGNLDNCDADYE 205 (595)
T ss_dssp CSEEEEEECCSSB--CSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE------SSCCCCEEECSS
T ss_pred CCCcceeeeecCC--CcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe------CCCccceEECCC
Confidence 34678887 4 87 77777774 346788888887654433222 124466777888
Q ss_pred CCcccce--------------------eEEEE------------------eeEecccC------------CCceeEEEEc
Q psy13207 86 FSRFNSI--------------------SIMYE------------------AHSINAEH------------KDLIHDVAYD 115 (197)
Q Consensus 86 ~~~~~~~--------------------~~~~~------------------~~~~~~~~------------~~~i~~~~~~ 115 (197)
+++++.+ +.+.+ +..+.... .....++.++
T Consensus 206 Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~s 285 (595)
T 1fwx_A 206 GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMA 285 (595)
T ss_dssp SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEEC
T ss_pred CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEc
Confidence 7775332 23333 22222011 1223457777
Q ss_pred CCCe-EEEEeeCCCeEEEEEccCCcc-------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 116 YYGL-RMATCSSDQNIKVTRDVMGTR-------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 116 ~~~~-~~~s~~~d~~i~~~d~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|+.- .++++..+..|.++|+.+... ........... ......++|+|+|....+.-.|+.|..||+.+
T Consensus 286 PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 286 PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 4443 335566789999999975210 00112233322 23568899999994444555899999999876
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.77 Score=37.59 Aligned_cols=143 Identities=13% Similarity=0.143 Sum_probs=73.0
Q ss_pred eEEEECCCCCCcEEEEEeCC-----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eEE
Q psy13207 29 TDVKFGPKQLGLVLATCAAD-----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SIM 95 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 95 (197)
..+.|+|+ |+.|+....| ..|..+++.++....... ..-........+.|+|++++|+.. +.+
T Consensus 224 ~~~~WspD--g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 224 GEIVWGPD--HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCL--YEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp SCCEECSS--TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEE--EECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred eeEEEecC--CCEEEEEEECCCCCCCEEEEEECCCCchhcEEE--EecCCCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 46899999 8777766655 257777876653211111 000112345678999999987543 455
Q ss_pred EEe---------eEecccCCCceeEEEEc-CCCeEEEEeeCC----CeEEEEEccCCcccceeeeeeecCce--ecEEEE
Q psy13207 96 YEA---------HSINAEHKDLIHDVAYD-YYGLRMATCSSD----QNIKVTRDVMGTRFDIETIGNFEDHY--CTVWRV 159 (197)
Q Consensus 96 ~~~---------~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~h~--~~v~~~ 159 (197)
+++ ..+..........+.|+ ++.+++++ ..+ ..|..+++.+... ...+ +..+. ..+..+
T Consensus 300 ~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t-~~~~a~~~~L~~~d~~~~~~--~~~~--li~~~~~~~l~~~ 374 (751)
T 2xe4_A 300 LDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILT-NEGGAVNHKLLIAPRGQPSD--WSHV--LVDHSEDVFMESI 374 (751)
T ss_dssp EESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEE-CTTTCTTCEEEEEETTSTTC--CCCE--EECCCSSEEEEEE
T ss_pred EECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEe-CCCCCCCcEEEEEcCCCccc--ceee--EECCCCCcEEEEE
Confidence 552 22221233445566655 55553333 332 3555566543100 1110 11222 244555
Q ss_pred EEccCCCEEEEEeCCCcEEEEE
Q psy13207 160 SWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
.+. .+.++++...++...+|-
T Consensus 375 ~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 375 AVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EEC-SSEEEEEEEETTEEEEEE
T ss_pred EEE-CCEEEEEEEeCCEEEEEE
Confidence 554 344556666777655543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.54 Score=35.79 Aligned_cols=146 Identities=11% Similarity=0.017 Sum_probs=78.1
Q ss_pred cceeEEEECCC-CCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccccee-------EEEE
Q psy13207 26 TSVTDVKFGPK-QLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSIS-------IMYE 97 (197)
Q Consensus 26 ~~v~~~~~~~~-~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 97 (197)
.....++|+|+ ..+.++++ ...+.|+.++..++...... ........++++++++.+++.. .++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~~~------~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDIKT------TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEEEC------CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEE
T ss_pred CCCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEEee------cCCCCccEEEECCCCCEEEEcCCCCcccceEEE
Confidence 34668899983 11554444 43388999998665422111 1234578999999998543321 1111
Q ss_pred e---------eEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 98 A---------HSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 98 ~---------~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
+ ..+ ........+++++ +..++++-..++.|+.+|..+... ...+..... ...-..++|+|+|++
T Consensus 212 ~~~~~~~~~~~~~--~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~--~~~~~~~~~-~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 212 FTRASGFTERLSL--CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL--TEEEVMMDT-KGSNFHIVWHPTGDW 286 (433)
T ss_dssp ECGGGTTCCEEEE--EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE--EEEEEECSC-CSSCEEEEECTTSSE
T ss_pred EECCCCeeccccc--cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE--EEEEeccCC-CCCcccEEEeCCCCE
Confidence 0 001 0112234455553 332224555667888888754211 011111111 122356999999985
Q ss_pred E-EEEeCCCcEEEEEcC
Q psy13207 168 V-ASSGDDGCVRLWKLK 183 (197)
Q Consensus 168 l-~~~~~dg~i~iw~~~ 183 (197)
| ++-...+.|+.+++.
T Consensus 287 LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEETTTTEEEEEEBC
T ss_pred EEEEeCCCCEEEEEeCC
Confidence 4 445567889998875
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.16 Score=36.05 Aligned_cols=124 Identities=8% Similarity=-0.023 Sum_probs=69.7
Q ss_pred EEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------ee
Q psy13207 31 VKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AH 99 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~ 99 (197)
+.+.. +++.+..-.++.+.++|..+.+.+.++.....- ..++ +++..|..+ +.++| +.
T Consensus 101 it~~g---~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG------wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 101 LASDG---ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG------WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVG 169 (268)
T ss_dssp EEECS---SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC------CCEE--EETTEEEEECSSSEEEEECTTTCCEEE
T ss_pred EEEeC---CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce------eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEE
Confidence 55543 345555668899999999998887777644331 1111 223332211 44555 22
Q ss_pred Eecc-cCC---CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-------------ceecEEEEEE
Q psy13207 100 SINA-EHK---DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-------------HYCTVWRVSW 161 (197)
Q Consensus 100 ~~~~-~~~---~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~ 161 (197)
.+.. .+. ..++.+.|. +..+ +....++.|.+.|.++ ++.+..+.- -..-.+.|++
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~dG~ly--anvw~s~~I~vIDp~T-----G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~ 242 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECANGVIY--ANIWHSSDVLEIDPAT-----GTVVGVIDASALTRAVAGQVTNPEAVLNGIAV 242 (268)
T ss_dssp EEECEETTEECCCEEEEEEETTEEE--EEETTCSEEEEECTTT-----CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEE
T ss_pred EEEeCCCCcccccccccEEeCCEEE--EEECCCCeEEEEeCCC-----CcEEEEEECCCCcccccccccCcCCceEEEEE
Confidence 2220 111 245677777 5433 6666788999999987 343333321 1135689999
Q ss_pred ccCCCEEEEEe
Q psy13207 162 NITGTIVASSG 172 (197)
Q Consensus 162 ~p~~~~l~~~~ 172 (197)
+|+++.|+..+
T Consensus 243 dp~~~rlfVTG 253 (268)
T 3nok_A 243 EPGSGRIFMTG 253 (268)
T ss_dssp CTTTCCEEEEE
T ss_pred cCCCCEEEEeC
Confidence 99765454444
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.56 Score=35.74 Aligned_cols=135 Identities=9% Similarity=0.045 Sum_probs=78.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCC
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK 106 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (197)
.|..+..+|+ |++||..+. ..|.|-.+..+..... .... ...+.+-.|. +........
T Consensus 67 ~i~qlvlSps--G~lLAl~g~-~~V~Vv~LP~~~~~~~---~~~~--~~~~q~~ty~--------------l~~~~~~~~ 124 (452)
T 3pbp_A 67 DTFHVISSTS--GDLLCLFND-NEIFVMEVPWGYSNVE---DVSI--QDAFQIFHYS--------------IDEEEVGPK 124 (452)
T ss_dssp TTCEEEECTT--SSEEEEECS-SEEEEEECCTTCSCCC---CHHH--HHTTEEEEEE--------------GGGCC--CC
T ss_pred ceeEEEECCC--CCEEEEecC-CeEEEEEecCccccCc---cccc--ccccceeEEE--------------cCCcccCCC
Confidence 4677999998 999888764 5888888874321110 0000 0011111111 111110235
Q ss_pred CceeEEEEc-----CCCeEEEEeeCCCeEEEEEccCCcccceeee------eeecCceecEEEEEEccCCCEEEEEe--C
Q psy13207 107 DLIHDVAYD-----YYGLRMATCSSDQNIKVTRDVMGTRFDIETI------GNFEDHYCTVWRVSWNITGTIVASSG--D 173 (197)
Q Consensus 107 ~~i~~~~~~-----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~------~~~~~h~~~v~~~~~~p~~~~l~~~~--~ 173 (197)
..|..+.|| +..+ ++-..|+.|++||+...... ...+ ..+......|.+++|.+++-.|...+ .
T Consensus 125 s~I~qVlWHPl~~~ds~L--VVLtsD~~Ir~yDl~~s~~~-P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~ 201 (452)
T 3pbp_A 125 SSIKKVLFHPKSYRDSCI--VVLKEDDTITMFDILNSQEK-PIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE 201 (452)
T ss_dssp CCEEEEEECTTBGGGCEE--EEEETTSCEEEEETTCTTSC-CEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred CceeEEEeccccCCCCeE--EEEecCCEEEEEEcccCCCC-CcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence 778888898 3456 89999999999999752111 1111 12222336788999999887666644 7
Q ss_pred CCcEEEEEcCCCc
Q psy13207 174 DGCVRLWKLKKKR 186 (197)
Q Consensus 174 dg~i~iw~~~~~~ 186 (197)
+|-|+-.-.-.+.
T Consensus 202 ~GDIYAlcP~LP~ 214 (452)
T 3pbp_A 202 GGDIFAFYPFLPS 214 (452)
T ss_dssp SCEEEEESSCCCS
T ss_pred CCCEEEECCCCcc
Confidence 7888776544333
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.9 Score=37.30 Aligned_cols=151 Identities=7% Similarity=-0.001 Sum_probs=90.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc---eeccCCCeeeEEEccCCCcccc----eeEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH---EVACPTLASCLTWNHSFSRFNS----ISIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~- 97 (197)
..|.++...++ |.+.+ |+.+ -|.+++..+.... .+.... .......|.++...+++...+. ++..|+
T Consensus 263 ~~i~~i~~d~~--g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~ 337 (795)
T 4a2l_A 263 NYIRSLAMDSQ--NRLWI-GTFN-DLNIYHEGTDSFA-SYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHP 337 (795)
T ss_dssp SBEEEEEECTT--SCEEE-EESS-CEEEEETTTTEEE-EECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECG
T ss_pred CeEEEEEEcCC--CCEEE-EeCC-hhheEcCCCCeEE-EEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCC
Confidence 56889988887 76544 4444 5788887655321 111000 0011467899999998876543 466666
Q ss_pred ----eeEecc------cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee------cCceecEEEEE
Q psy13207 98 ----AHSINA------EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF------EDHYCTVWRVS 160 (197)
Q Consensus 98 ----~~~~~~------~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~------~~h~~~v~~~~ 160 (197)
...+.. .....|.++... ...+ ..|+.++-|..|+..+... .....- .-....|.++.
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l--WiGt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 338 IRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL--WIGTNDGGLNLYNPITQRF---TSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp GGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE--EEEESSSCEEEECTTTCCE---EEECCC------CCSCSCEEEEE
T ss_pred CcccceEEcCCCCCCCCCCCeeEEEEECCCCCE--EEEECCCCeEEEcCCCCcE---EEEecCCCCcccCCCCccEEEEE
Confidence 222220 123458888887 4455 5677787788898765211 111000 01135689999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..++|+.|..|+.++-+..+|.++++
T Consensus 413 ~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 413 VDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EETTTTEEEEEETTTEEEEEETTTCC
T ss_pred EcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 98888856667777779999987643
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.47 Score=34.79 Aligned_cols=31 Identities=6% Similarity=0.148 Sum_probs=26.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..+.++++|+|+.|+....+|.+..+|+++.
T Consensus 186 G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 186 GYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3578999999998888767999999998854
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.75 Score=35.77 Aligned_cols=154 Identities=6% Similarity=0.018 Sum_probs=81.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE-------ccCCCcccce-------
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW-------NHSFSRFNSI------- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~------- 92 (197)
....|+|.|.+.++++++....+.|++.|+........... .. ........++| +++++++..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~-~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI-NT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC-TT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc-Cc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 35688999821145555555556788888876543211110 00 01235788999 9998854322
Q ss_pred -----eEEEEee---Eecc-------cCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEcc-------CCcccc-------
Q psy13207 93 -----SIMYEAH---SINA-------EHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDV-------MGTRFD------- 142 (197)
Q Consensus 93 -----~~~~~~~---~~~~-------~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~-------~~~~~~------- 142 (197)
+.+++.. .+.. .-......++.++ +..++++-..++.|..+|+. +...+.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 2233200 0100 0011234555663 33333666677889999986 322100
Q ss_pred --eeeeeeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcC
Q psy13207 143 --IETIGNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLK 183 (197)
Q Consensus 143 --~~~~~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~ 183 (197)
.+.+.... .......++|+|+|++| ++-+....|+.+++.
T Consensus 298 g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 298 NTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 01122221 23345789999999954 444567788887654
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.45 Score=33.21 Aligned_cols=153 Identities=5% Similarity=-0.068 Sum_probs=84.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc-cc-------eeEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF-NS-------ISIMYE 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~ 97 (197)
.....+++.|++ +.++++-...+.|.++++..... ..+. . ........++++|++..+ .+ .+..++
T Consensus 79 ~~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g~~~-~~~~-~---~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 79 GSPEGIALDHLG-RTIFWTDSQLDRIEVAKMDGTQR-RVLF-D---TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSC-EEEE-C---SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCccEEEEEecC-CeEEEEECCCCEEEEEEcCCCCE-EEEE-E---CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 456788998861 45556666678999998864321 1110 0 012456788999865443 22 133343
Q ss_pred -----eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
...+..........+++++ ...++++-...+.|.++|... ......... ......++.. .+.++++.
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-----~~~~~~~~~-~~~P~gi~~d-~~~lyva~ 225 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-----PGRRKVLEG-LQYPFAVTSY-GKNLYYTD 225 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-----EEEEEEEEC-CCSEEEEEEE-TTEEEEEE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-----CceEEEecC-CCCceEEEEe-CCEEEEEE
Confidence 1222102234567888884 233335666678999999864 111111222 1223456654 34444444
Q ss_pred eCCCcEEEEEcCCCcchhhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~~ 191 (197)
...+.|..+|..+++....+
T Consensus 226 ~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEeCCCCCceEEE
Confidence 46689999999877655444
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.16 Score=41.01 Aligned_cols=61 Identities=10% Similarity=-0.007 Sum_probs=39.2
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEccCCCEEEEE-eC----------------CCcE
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNITGTIVASS-GD----------------DGCV 177 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~~~-~~----------------dg~i 177 (197)
+..+ +.++.|+.+++||.++ ++.+..+.... ..-.-+.|.++|+.++.. +. .+.+
T Consensus 488 g~~v--~~g~~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l 560 (677)
T 1kb0_A 488 GNVV--FQGTADGRLVAYHAAT-----GEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTV 560 (677)
T ss_dssp TTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEE
T ss_pred CCEE--EEECCCCcEEEEECCC-----CceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeE
Confidence 5555 6788999999999987 56666554322 222335566788644432 22 3678
Q ss_pred EEEEcC
Q psy13207 178 RLWKLK 183 (197)
Q Consensus 178 ~iw~~~ 183 (197)
..|.+.
T Consensus 561 ~~f~l~ 566 (677)
T 1kb0_A 561 YTFVVG 566 (677)
T ss_dssp EEEEET
T ss_pred EEEecc
Confidence 888876
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.21 Score=40.54 Aligned_cols=47 Identities=11% Similarity=-0.053 Sum_probs=31.4
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee-cEEEEEEccCCCEEE
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC-TVWRVSWNITGTIVA 169 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~ 169 (197)
+..+ +.++.|+.++.||.++ ++.+-.+..... .-.-+.|..+|+..+
T Consensus 486 gglv--f~gt~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 486 GNLV--FEGSADGRVIAYAADT-----GEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp TTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEE--EEECCCCcEEEEECCC-----CccceeeeCCCCcccCceEEEECCEEEE
Confidence 6666 7889999999999988 566655543221 113366677886443
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=93.27 E-value=1.8 Score=31.79 Aligned_cols=146 Identities=8% Similarity=-0.061 Sum_probs=81.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc-c-----eeEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN-S-----ISIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--- 97 (197)
.+.+++|++.. +.++.+-...+.|..+++....... +. . ........+++.+.+..+. + .+.+.+
T Consensus 74 ~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~~g~~~~~-~~-~---~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 74 NAIALDFHHRR-ELVFWSDVTLDRILRANLNGSNVEE-VV-S---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp CEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEE-EE-C---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEeccc-cEEEEEeccCCceEEEecCCCCceE-EE-e---CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 46788998752 5555666677888888877543211 10 0 1123456778877554432 1 244444
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeCC-CeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCCEEEEE-
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGTIVASS- 171 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~- 171 (197)
...+..........+++++ ...++++-... +.|..+++.. .....+ ...-...+.++++|++..|+.+
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG------~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG------SGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS------CSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC------CCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 1122112334567888873 33333555455 7888888753 111111 1223456889999866555544
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
+..+.|..+++..
T Consensus 222 ~~~~~I~~~~~dG 234 (349)
T 3v64_C 222 AKHHVIERANLDG 234 (349)
T ss_dssp TTTTEEEEEETTS
T ss_pred CCCCEEEEEeCCC
Confidence 4667899898764
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=93.11 E-value=0.94 Score=36.82 Aligned_cols=149 Identities=7% Similarity=-0.040 Sum_probs=73.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCccc-c-----eeEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFN-S-----ISIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-----~~~~~~- 97 (197)
..+.+++|.+.. +.++++-...+.|+.+++......... ...+. .......+++.+.+..|. + .|.+++
T Consensus 406 ~~p~gla~d~~~-~~Ly~sD~~~~~I~~~~~~g~~~~~~~--~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTT-TEEEECCTTTTSBEEEESCCCCC-CCC--CCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cceEEEcccccc-CeEEEEecCCCeEEEEecCCCCCCcce--EEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 356788898861 444455456688888888651100000 00010 112345677775443332 1 245554
Q ss_pred ----eeEecccCCCceeEEEEcC--CCeEEEEeeCC-CeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCC-CEE
Q psy13207 98 ----AHSINAEHKDLIHDVAYDY--YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITG-TIV 168 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~-~~l 168 (197)
...+..........|++++ ..+ +++-... +.|.++++.. .....+ ...-...+.|+|+|++ ++.
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~l-y~td~~~~~~I~~~~~dG------~~~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFM-YWTDWGTPAKIKKGGLNG------VDIYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCC-EECCCSSSCCEEBCCSSS------CCCCEESCSSCSSCCCEEECTTTCCEE
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcE-EEcccCCCCeEEEEeCCC------CCeeEEEeCCCCCccEEEEeccCCEEE
Confidence 2222211223456677762 233 1333222 6777766643 111111 1112345789999875 444
Q ss_pred EEEeCCCcEEEEEcCC
Q psy13207 169 ASSGDDGCVRLWKLKK 184 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~ 184 (197)
++-+..+.|..+++..
T Consensus 556 ~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNG 571 (699)
T ss_dssp EEETTTTEEEEECSSS
T ss_pred EEecCCCeEEEEccCC
Confidence 5555677899998864
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=93.01 E-value=3.2 Score=34.05 Aligned_cols=145 Identities=9% Similarity=-0.030 Sum_probs=86.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc---eeEEEE-----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS---ISIMYE----- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 97 (197)
..|.++...++ ++.|..|+.++-|..+|..+++.. .+...........|.++...+++...++ ++..|+
T Consensus 406 ~~v~~i~~d~~--g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 406 NNIKAVYVDEK--KSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRS 482 (795)
T ss_dssp SCEEEEEEETT--TTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTE
T ss_pred ccEEEEEEcCC--CCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCe
Confidence 46888888776 774566777777899998765421 1111000012456888888888876543 477777
Q ss_pred eeEecc------cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-------CceecEEEEEEcc
Q psy13207 98 AHSINA------EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-------DHYCTVWRVSWNI 163 (197)
Q Consensus 98 ~~~~~~------~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~p 163 (197)
...+.. .....|.++... ...+ ..|+. +-+..||..+. .. .+. .....|.++...+
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~l--Wigt~-~Gl~~~~~~~~-----~~--~~~~~~~~~~l~~~~i~~i~~d~ 552 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDSHKRL--WIGGE-EGLSVFKQEGL-----DI--QKASILPVSNVTKLFTNCIYEAS 552 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECTTCCE--EEEES-SCEEEEEEETT-----EE--EECCCSCSCGGGGSCEEEEEECT
T ss_pred EEEccccccccccCCceEEEEEECCCCCE--EEEeC-CceEEEeCCCC-----eE--EEecCCCCCCCCCCeeEEEEECC
Confidence 222210 123568888877 4445 34444 45777887642 21 111 1245789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+|++.++.. + -+..||..+.
T Consensus 553 ~g~lWigT~-~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 553 NGIIWVGTR-E-GFYCFNEKDK 572 (795)
T ss_dssp TSCEEEEES-S-CEEEEETTTT
T ss_pred CCCEEEEeC-C-CceeECCCCC
Confidence 998666543 3 5777887653
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=93.01 E-value=0.66 Score=36.70 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=36.0
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.++.|..||..++ +.+-.+.. ...+........+..++.++.||.++.+|.++++..
T Consensus 442 ~~g~l~a~D~~tG-----~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 442 EMGQIRAFDLTTG-----KAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CCEEEEEECTTTC-----CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCC-----CEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 4688999998763 33322221 112222222334667778999999999999988754
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=92.81 E-value=2.2 Score=31.61 Aligned_cols=31 Identities=6% Similarity=-0.028 Sum_probs=24.4
Q ss_pred cEEEEEEccCCCEEEEE-eCCCcEEEEEcCCC
Q psy13207 155 TVWRVSWNITGTIVASS-GDDGCVRLWKLKKK 185 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~ 185 (197)
.-+.++|+||++.|+.+ +..+.|..|++...
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 45889999999877665 46789999998643
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=92.81 E-value=2.3 Score=31.73 Aligned_cols=148 Identities=7% Similarity=-0.077 Sum_probs=79.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------eeEEEE--
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ISIMYE-- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-- 97 (197)
..+.+++|.+.. +.++++-...+.|..+++....... +. . ........+++.+.+..|.. .+.+.+
T Consensus 116 ~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~~~~~-~~-~---~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 116 ENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSNVEE-VV-S---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCCEEE-EE-C---SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT
T ss_pred CccEEEEEecCC-CeEEEEeCCCCcEEEEecCCCCcEE-EE-e---CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC
Confidence 356789998751 5556666677888888887543111 10 0 01224466777765444321 133333
Q ss_pred ---eeEecccCCCceeEEEEcC-CCeEEEEeeCC-CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE-EE
Q psy13207 98 ---AHSINAEHKDLIHDVAYDY-YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA-SS 171 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~ 171 (197)
...+..........+++++ ...++++-... +.|..+++... .........-...+.++++|++..|+ +-
T Consensus 190 g~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-----GRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-----SCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred CCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-----CcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 1111112234567788872 33333454444 77888877531 11111122233568899998655554 44
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
+..+.|..+++..
T Consensus 265 ~~~~~I~~~d~dG 277 (386)
T 3v65_B 265 AKHHVIERANLDG 277 (386)
T ss_dssp TTTTEEEEECTTS
T ss_pred CCCCEEEEEeCCC
Confidence 5667888888764
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=92.64 E-value=3.6 Score=33.68 Aligned_cols=145 Identities=10% Similarity=-0.008 Sum_probs=84.6
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc---eeEEEE-----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS---ISIMYE----- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 97 (197)
..|.++...++ |.+.+ |+.++-|..++..+++.. .+... ......|.++...+++...++ ++..|+
T Consensus 407 ~~v~~i~~d~~--g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~--~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 407 NSVLCSLKDSE--GNLWF-GTYLGNISYYNTRLKKFQ-IIELE--KNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKK 480 (781)
T ss_dssp SBEEEEEECTT--SCEEE-EETTEEEEEECSSSCEEE-ECCST--TTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSS
T ss_pred cceEEEEECCC--CCEEE-EeccCCEEEEcCCCCcEE-EeccC--CCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCe
Confidence 56888888776 66444 666667888887655321 11100 012457888888888776543 467776
Q ss_pred eeEecccC-----CCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec---C-ceecEEEEEEccCCCE
Q psy13207 98 AHSINAEH-----KDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE---D-HYCTVWRVSWNITGTI 167 (197)
Q Consensus 98 ~~~~~~~~-----~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~-h~~~v~~~~~~p~~~~ 167 (197)
...+.... ...|.++... ...+ ..|+.++-+..+|.++. .+..+. + ....|.++...++|++
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~l--Wigt~~~Gl~~~~~~~~------~~~~~~~~~~l~~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRF--WIGTFGGGVGIYTPDMQ------LVRKFNQYEGFCSNTINQIYRSSKGQM 552 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCE--EEEESSSCEEEECTTCC------EEEEECTTTTCSCSCEEEEEECTTSCE
T ss_pred EEecccCcccccccceeEEEEEcCCCCE--EEEEcCCCEEEEeCCCC------eEEEccCCCCCCCCeeEEEEECCCCCE
Confidence 11221011 3568888877 4445 44555444666887541 122221 1 2356889999999986
Q ss_pred EEEEeCCCcEEEEEcCCC
Q psy13207 168 VASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~ 185 (197)
.++. .+|.+..||..+.
T Consensus 553 Wi~T-~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 553 WLAT-GEGLVCFPSARNF 569 (781)
T ss_dssp EEEE-TTEEEEESCTTTC
T ss_pred EEEE-CCCceEEECCCCC
Confidence 6654 4666577887654
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=92.13 E-value=2.2 Score=34.45 Aligned_cols=59 Identities=8% Similarity=-0.050 Sum_probs=39.6
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
..++.|..||..+ ++.+-.... ........+...+.+++.++.||.++.||.++++.+-
T Consensus 435 ~~~g~l~A~D~~t-----G~~~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 435 VVSGALLAWDPVK-----QKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp GCEEEEEEEETTT-----TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CccceEEEEeCCC-----CcEEEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhhe
Confidence 3558899999987 333332221 1222333445567889999999999999999887643
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=91.90 E-value=2.2 Score=29.50 Aligned_cols=68 Identities=9% Similarity=-0.020 Sum_probs=37.2
Q ss_pred eeEEEEcCCCeEEEEeeCCCeEEEEEccCC--cccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 109 IHDVAYDYYGLRMATCSSDQNIKVTRDVMG--TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 109 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~--~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
..++-|.++..+.++ .||.|.-++..+. ..+-......-.+--..+..|.+.|+|.+.+.. |+.++-.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 355666655542244 6698887775431 111111111111112467899999999877666 7775433
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=91.75 E-value=3.4 Score=31.39 Aligned_cols=143 Identities=7% Similarity=-0.008 Sum_probs=78.2
Q ss_pred eeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEee-
Q psy13207 28 VTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEAH- 99 (197)
Q Consensus 28 v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~- 99 (197)
...++++| + |.++++-..++.|..++..++.....+. ..........++|+|+++.|..+ +..++..
T Consensus 230 P~giavd~~~--G~lyv~d~~~~~V~~~d~~~g~~~~~~~---~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 230 AKTCAVHPQN--GKIYYTRYHHAMISSYDPATGTLTEEEV---MMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp BCCCEECTTT--CCEEECBTTCSEEEEECTTTCCEEEEEE---ECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCEEEEeCCC--CeEEEEECCCCEEEEEECCCCeEEEEEe---ccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 45678888 5 7766676677889988887554311111 11111223469999999854322 4444411
Q ss_pred ---------EecccC---------------CCceeEEEE---------cCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 100 ---------SINAEH---------------KDLIHDVAY---------DYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 100 ---------~~~~~~---------------~~~i~~~~~---------~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.+. +. -.....+++ ..+.-++++-...+.|+.++.. +..
T Consensus 305 ~~~~~~~~~~~a-g~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~------G~v- 376 (433)
T 4hw6_A 305 ETGKLAVPYIVC-GQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE------GRV- 376 (433)
T ss_dssp TTCCBCCCEEEE-ECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT------SEE-
T ss_pred CCcccCcEEEEE-ecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC------CCE-
Confidence 111 10 112455777 4222222555556778877742 211
Q ss_pred eeecC------------------ceecEEEEEEc-cCCCEEEEEeCCCcEEEEEcC
Q psy13207 147 GNFED------------------HYCTVWRVSWN-ITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 147 ~~~~~------------------h~~~v~~~~~~-p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..+.+ .-.....++++ ++|.++++-..++.|+.++++
T Consensus 377 ~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 377 TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 11111 11236789999 677777776777888887764
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=91.37 E-value=1.1 Score=35.59 Aligned_cols=57 Identities=16% Similarity=0.354 Sum_probs=35.5
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.++.|..||..++ +.+-..... .++..-.....+.+++.++.||.++.||.++++..
T Consensus 464 ~~G~l~A~D~~tG-----~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSG-----KVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTC-----CEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCC-----CEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 4688999999873 332222111 11111112224667888999999999999988753
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=91.29 E-value=3.1 Score=30.09 Aligned_cols=155 Identities=10% Similarity=0.036 Sum_probs=81.2
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----e-EEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----S-IMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~- 97 (197)
+...+..+.+.++ +..++.+ .+|.|.. ....+ .+|..... .....+..+.+.+++..++.+ + +-.|
T Consensus 120 ~~~~~~~i~~~~~--~~~~~~~-~~g~v~~-S~DgG---~tW~~~~~-~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~ 191 (327)
T 2xbg_A 120 LPGSPRLIKALGN--GSAEMIT-NVGAIYR-TKDSG---KNWQALVQ-EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP 191 (327)
T ss_dssp CSSCEEEEEEEET--TEEEEEE-TTCCEEE-ESSTT---SSEEEEEC-SCCCCEEEEEECTTSCEEEEETTSSEEEEECT
T ss_pred CCCCeEEEEEECC--CCEEEEe-CCccEEE-EcCCC---CCCEEeec-CCCcceEEEEEcCCCcEEEEECCCcEEEEeCC
Confidence 3345677777665 6666655 4554421 11222 22332211 113467888898888776543 1 1111
Q ss_pred ----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCCEEEEE
Q psy13207 98 ----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
-..+.......+..+.+. ...+ ...+.+|.+++.+...+..+ ..+..- ..+...+.++++.|++.+++++
T Consensus 192 gG~tW~~~~~~~~~~~~~~~~~~~g~~--~~~~~~G~~~~s~~D~G~tW--~~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 192 GQTAWEPHNRTTSRRLHNMGFTPDGRL--WMIVNGGKIAFSDPDNSENW--GELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp TCSSCEEEECCSSSCEEEEEECTTSCE--EEEETTTEEEEEETTEEEEE--CCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred CCCceeECCCCCCCccceeEECCCCCE--EEEeCCceEEEecCCCCCee--EeccCCcccCCcceEEEEecCCCEEEEEe
Confidence 011111344567788887 4445 55667788777642211111 111110 0122357889999888877665
Q ss_pred eCCCcEEEEEcCCCcchhhhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~~~ 192 (197)
. +|.+ ++..+.++.|..+.
T Consensus 268 ~-~g~i-~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 268 G-AGAL-LCSQDGGQTWQQDV 286 (327)
T ss_dssp S-TTCE-EEESSTTSSCEECG
T ss_pred C-CCeE-EEeCCCCcccEEcC
Confidence 4 6776 45566666776554
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=91.21 E-value=3.9 Score=31.02 Aligned_cols=57 Identities=11% Similarity=0.044 Sum_probs=37.6
Q ss_pred ceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (197)
...+++++| + +.++++-..++.|..++........ ............++|+|+++++
T Consensus 227 ~p~giavdp~~--g~lyv~d~~~~~V~~~~~~~~~~~~----~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 227 NCNGAETHPIN--GELYFNSWNAGQVFRYDFTTQETTP----LFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp SCCCEEECTTT--CCEEEEETTTTEEEEEETTTTEEEE----EEECSSSSCCEEEEECTTSSEE
T ss_pred CceEEEEeCCC--CEEEEEECCCCEEEEEECCCCcEEE----EEEcCCCCcceeEEEcCCCCEE
Confidence 356778899 5 7777777777899999987553211 1111112346789999999854
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=91.17 E-value=1.6 Score=35.51 Aligned_cols=152 Identities=9% Similarity=-0.063 Sum_probs=75.9
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE---
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE--- 97 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--- 97 (197)
...+++.+.. +.++++-...+.|.+.++.......... ........++++|.+.+|..+ |..++
T Consensus 455 P~glavD~~~-g~LY~tD~~~~~I~v~d~dg~~~~~l~~-----~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 455 PDGLAVDWIH-SNIYWTDSVLGTVSVADTKGVKRKTLFR-----EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CCCEECCCSS-SBCEECCTTTSCEEEEBSSSCCEEEECC-----CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred cceEEEEeeC-CcEEEEeccCCeEEEEecCCCceEEEEe-----CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 4567777541 5556665667888888876542111000 012345677888765543221 22222
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
...+....-...+.|++++ ...++++-...+.|.++++... ....+............+++..+ .++++....
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECSTT
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCCC
Confidence 1111101223456788872 2222255556778888888531 11222211111122344555443 455555667
Q ss_pred CcEEEEEcCCCcchh
Q psy13207 175 GCVRLWKLKKKRKKK 189 (197)
Q Consensus 175 g~i~iw~~~~~~~~~ 189 (197)
+.|..++..+++...
T Consensus 605 ~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 605 EAIFSANRLTGSDVN 619 (699)
T ss_dssp TCEEEEETTTEEEEE
T ss_pred CeEEEEEccCCCceE
Confidence 889999876654433
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=90.89 E-value=3.4 Score=29.87 Aligned_cols=148 Identities=9% Similarity=-0.021 Sum_probs=80.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc-c-----eeEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN-S-----ISIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--- 97 (197)
.+.+++|.+.. +.++.+-...+.|..+++......... .. ..-.....+++.+.+..+. + .+.+++
T Consensus 36 ~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~~g~~~~~~~-~~---~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 36 DAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTESVQNV-VV---SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEGGG-TEEEEEETTTTEEEEEETTSSSCCCEE-EE---ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEEEeCC-CEEEEEECCCCcEEEEEccCCCceEEE-Ec---CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 46688999852 566666667788988888765321110 01 1123456777776444332 1 245555
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEe-eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE-Ee
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATC-SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS-SG 172 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~-~~ 172 (197)
...+..........+++.+ ...++.+- +..+.|...++.... ...+ ....-...+.++++|++..|+. -+
T Consensus 111 ~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~--~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFII--INSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEE--ECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEE--EECCCCCccEEEEeccCCEEEEEEC
Confidence 1122112334567788872 22222443 235778877775310 1111 1122235589999996655554 45
Q ss_pred CCCcEEEEEcCC
Q psy13207 173 DDGCVRLWKLKK 184 (197)
Q Consensus 173 ~dg~i~iw~~~~ 184 (197)
..+.|..+|+..
T Consensus 186 ~~~~I~~~d~dG 197 (318)
T 3sov_A 186 KLNFIHKSNLDG 197 (318)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 678899998864
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=90.66 E-value=2.2 Score=34.08 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=35.2
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.++.|..||..++ +.+-.... ..+...-.....+.+++.++.||.++.||.++++..
T Consensus 451 ~~G~l~A~D~~tG-----~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 451 GLGQIKAYNAITG-----DYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CCEEEEEECTTTC-----CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCeEEEEECCCC-----CEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 4588999999773 32222210 111111112235677888999999999999998753
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=89.95 E-value=5.3 Score=30.57 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=34.6
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---ccCCCeeeEEEccC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV---ACPTLASCLTWNHS 85 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 85 (197)
...++|+|.|+ |+++++-...+.|++++..++.......+...+ ........++|+|+
T Consensus 27 ~~P~~~a~~pd--G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPD--NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCC--CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 35679999998 987776544457888876544321111111111 12456678999995
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=89.76 E-value=4.6 Score=29.60 Aligned_cols=27 Identities=22% Similarity=0.399 Sum_probs=20.9
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYE 55 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~ 55 (197)
.....++|.|+ |+++++ ..+|.|.+++
T Consensus 31 ~~P~~ia~~pd--G~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPD--GGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTT--SCEEEE-ETTTEEEEEE
T ss_pred CCceEEEEcCC--CeEEEE-eCCCeEEEEE
Confidence 35678999998 885555 5669999988
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.15 E-value=6.6 Score=30.55 Aligned_cols=41 Identities=7% Similarity=0.076 Sum_probs=26.4
Q ss_pred cEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 155 TVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 155 ~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
....|+++++ |.+.++=+.+..|+.+++..........+++
T Consensus 445 ~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~~~~~~ 486 (496)
T 3kya_A 445 DVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAGDENIP 486 (496)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---------
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccccCCCCc
Confidence 4678999996 8777777788999999998766655554444
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=88.27 E-value=5 Score=31.84 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=30.7
Q ss_pred cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecE-EEEEEccCCC-EEEEE
Q psy13207 115 DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV-WRVSWNITGT-IVASS 171 (197)
Q Consensus 115 ~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v-~~~~~~p~~~-~l~~~ 171 (197)
.+..+ +.++.|+.++.||.++ ++.+-.++...... .-+.|..+|+ |+++.
T Consensus 496 agglv--f~g~~dg~l~A~D~~t-----G~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 496 AGNLV--FTGTGDGYFKAFDAKS-----GKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEE--EEECCCCcEEEEECCC-----CCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 35556 6789999999999987 55555544322111 1255667776 44443
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=88.06 E-value=5.8 Score=28.50 Aligned_cols=148 Identities=7% Similarity=-0.056 Sum_probs=81.0
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc---ccccceeccceec-cCCCeeeEEEccCCCcc-cc-----eeE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV---MNLSQWCLQHEVA-CPTLASCLTWNHSFSRF-NS-----ISI 94 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-----~~~ 94 (197)
.....++.|++.. +.++++-...+.|..+++... ..... .+. .-.....+++++.+..+ .+ .+.
T Consensus 29 ~~~p~g~~~d~~~-~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-----~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~ 102 (316)
T 1ijq_A 29 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDT-----VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 102 (316)
T ss_dssp CSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEE-----EECSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEEeCC-CEEEEEECCCCcEEEEECCCCCCCcccEE-----EEeCCCCCcCEEEEeecCCeEEEEECCCCEEE
Confidence 3456789999861 456666667789999988752 11111 011 12345778887654433 21 255
Q ss_pred EEE-----eeEecccCCCceeEEEEcC-CCeEEEEeeCC-CeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCC
Q psy13207 95 MYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGT 166 (197)
Q Consensus 95 ~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~ 166 (197)
+++ ...+..........+++++ ...++++.... +.|..+++.. .....+ ...-.....++++|++.
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG------~~~~~~~~~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG------VDIYSLVTENIQWPNGITLDLLSG 176 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS------CCEEEEECSSCSCEEEEEEETTTT
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC------CCeEEEEECCCCCceEEEEeccCC
Confidence 555 1222112234567888873 33323444333 6788877753 111111 12234568899998766
Q ss_pred EEEEE-eCCCcEEEEEcCC
Q psy13207 167 IVASS-GDDGCVRLWKLKK 184 (197)
Q Consensus 167 ~l~~~-~~dg~i~iw~~~~ 184 (197)
.|+.+ +..+.|..+|+..
T Consensus 177 ~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 177 RLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEETTTTEEEEEETTS
T ss_pred EEEEEECCCCeEEEEecCC
Confidence 55544 4667899999864
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=87.79 E-value=6.9 Score=29.09 Aligned_cols=149 Identities=5% Similarity=-0.109 Sum_probs=79.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEEE--
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMYE-- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 97 (197)
....+++.+.. +.++++-...+.|.+.++....... + .. ..-.....++++|.+..+.. .+..++
T Consensus 160 ~p~glavd~~~-g~lY~~d~~~~~I~~~~~dg~~~~~-l-~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 160 SPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAHRKV-L-LW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp CCCCEEEETTT-TEEEEEETTTTEEEECBTTSCSCEE-E-EC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CccEEEEEeCC-CeEEEEcCCCCeEEEEeCCCCceEE-e-ec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 34567777641 5555666666778777765432110 0 00 11245678888886655422 133333
Q ss_pred ---eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 ---AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
...+....-...+.|+++ ....++++-...+.|..+|..... ...+ +.........+++ ..+.++.+...
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~--~~~~~~~P~giav-~~~~ly~td~~ 307 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAV--ISQGLPHPFAITV-FEDSLYWTDWH 307 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS---CEEE--ECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe---eEEE--EECCCCCceEEEE-ECCEEEEeeCC
Confidence 122211223446788887 222222555566888888876310 1111 2222334566777 35566666667
Q ss_pred CCcEEEEEcCCCcc
Q psy13207 174 DGCVRLWKLKKKRK 187 (197)
Q Consensus 174 dg~i~iw~~~~~~~ 187 (197)
.+.|..++..+++.
T Consensus 308 ~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 308 TKSINSANKFTGKN 321 (386)
T ss_dssp TTEEEEEETTTCCS
T ss_pred CCeEEEEECCCCcc
Confidence 78888888555443
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=87.57 E-value=1.6 Score=36.91 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=30.7
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccccee
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWC 66 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 66 (197)
.+.++...++ ..++++-+.|+++|+|++.+++.+.+..
T Consensus 237 ~~~~~~~~~~--~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLST--YNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETT--TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCC--CcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4667777776 7899999999999999999987655443
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=87.50 E-value=6 Score=28.09 Aligned_cols=73 Identities=12% Similarity=-0.012 Sum_probs=42.8
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--cEEEEEcCC
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--CVRLWKLKK 184 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~iw~~~~ 184 (197)
.....++|+++.-++++-...+.|..||... .....+. -......+++.|+|+++++..... .|..++..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g------~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG------NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC------CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC------ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 4566788873222225555778888888753 1111111 123578899999999766654432 366666555
Q ss_pred Cc
Q psy13207 185 KR 186 (197)
Q Consensus 185 ~~ 186 (197)
++
T Consensus 105 g~ 106 (306)
T 2p4o_A 105 GT 106 (306)
T ss_dssp SC
T ss_pred Ce
Confidence 43
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=87.45 E-value=7 Score=28.82 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=25.5
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV 59 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~ 59 (197)
-...+.++|.|+ |.++++--..|.|++++...+
T Consensus 31 L~~P~~ia~~pd--G~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 31 LNSPWGLAPLPG--GDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CSSEEEEEECTT--SCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCC--CcEEEEEecCCEEEEEECCCC
Confidence 445789999998 887777655899998876544
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=86.88 E-value=5 Score=33.98 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=30.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+.+++..++..++++-+.|+++++|++.+++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 567788888889999999999999999998876544
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=86.83 E-value=6.6 Score=27.88 Aligned_cols=154 Identities=9% Similarity=-0.024 Sum_probs=83.4
Q ss_pred eeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 15 w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.++...+... .....++|+++ ++++++-..++.|..+|..... ...+ ........+++.++++.+++.
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~--g~lyv~d~~~~~I~~~d~~g~~-~~~~------~~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPD--GTIFVTNHEVGEIVSITPDGNQ-QIHA------TVEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTT--SCEEEEETTTTEEEEECTTCCE-EEEE------ECSSEEEEEEECTTSCEEEEEEC
T ss_pred ceEeEeCCCC-CCcceEEECCC--CCEEEEeCCCCeEEEECCCCce-EEEE------eCCCCceeEEEcCCCcEEEEecc
Confidence 3444445432 46788999998 8877777788999999876531 1111 113467889999999865443
Q ss_pred -----eEEEE-----eeEecc-cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeee--------eecCc
Q psy13207 93 -----SIMYE-----AHSINA-EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIG--------NFEDH 152 (197)
Q Consensus 93 -----~~~~~-----~~~~~~-~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~--------~~~~h 152 (197)
+..++ +..+.. ........++.. +..+ +++-..++.|.++|..+.. ..... .....
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~-~v~d~~~g~i~~~d~~~~~---~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQY-LTADSYRGAIWLIDVVQPS---GSIWLEHPMLARSNSESV 167 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEE-EEEETTTTEEEEEETTTTE---EEEEEECGGGSCSSTTCC
T ss_pred CCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcE-EEEECCCCeEEEEeCCCCc---EeEEEECCccccccccCC
Confidence 22233 111110 111222333333 2222 2444457888888875310 11110 00011
Q ss_pred eecEEEEEEccCCCEEE-EEeCCCcEEEEEcCC
Q psy13207 153 YCTVWRVSWNITGTIVA-SSGDDGCVRLWKLKK 184 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~-~~~~dg~i~iw~~~~ 184 (197)
....+.+ +|+++.|+ +-+..+.|..+++..
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 1233445 78887554 445678899999874
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=86.82 E-value=11 Score=30.28 Aligned_cols=57 Identities=9% Similarity=0.131 Sum_probs=33.0
Q ss_pred eeEEEECCCCCCcEEEEEeC-CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc
Q psy13207 28 VTDVKFGPKQLGLVLATCAA-DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (197)
..++.+.++ +.+++.|+. +..+.+||..+.+ |.....+.....-.++...++++.++
T Consensus 245 ~~~~~~~~~--g~lyv~GG~~~~~v~~yd~~t~~----W~~~~~~~~~R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 245 CPGISMDGN--GQIVVTGGNDAKKTSLYDSSSDS----WIPGPDMQVARGYQSSATMSDGRVFT 302 (656)
T ss_dssp SCEEEECTT--SCEEEECSSSTTCEEEEEGGGTE----EEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred cccccCCCC--CCEEEeCCCCCCceEEecCcCCc----eeECCCCCccccccceEEecCCeEEE
Confidence 345677787 889999884 4689999987642 33222222222223444455555543
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.78 E-value=12 Score=30.94 Aligned_cols=153 Identities=7% Similarity=-0.042 Sum_probs=80.8
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce------eEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI------SIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~ 97 (197)
...+.+++|.+.. +.++++-...+.|+.+++......... ...+. .......|++.+.+..|..+ |.+.+
T Consensus 423 ~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~--~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 423 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------C--EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcce--eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 3456788898841 556666666778888887643210000 01111 12345678888776544322 44444
Q ss_pred -----eeEecccCCCceeEEEEcCC-CeEEEEeeC-CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDYY-GLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+........+.|++++. ..++++-.. .+.|.+.++.. ......+.........|++++.+..|+.
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-----~~~~~lv~~~l~~P~GLavD~~~~~LYw 574 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-----VDIYSLVTENIQWPNGITLDLLSGRLYW 574 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-----CCEEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-----CceEEEEeCCCCCceEEEEecCCCeEEE
Confidence 22222123345678888732 222244323 36788888753 1111222223346788999986665555
Q ss_pred E-eCCCcEEEEEcCCC
Q psy13207 171 S-GDDGCVRLWKLKKK 185 (197)
Q Consensus 171 ~-~~dg~i~iw~~~~~ 185 (197)
+ ...+.|...++...
T Consensus 575 aD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 575 VDSKLHSISSIDVNGG 590 (791)
T ss_dssp EETTTTEEEEEETTSC
T ss_pred EeCCCCcEEEEecCCC
Confidence 5 45567888887543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=85.78 E-value=5.4 Score=31.52 Aligned_cols=48 Identities=10% Similarity=-0.054 Sum_probs=28.3
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee-cEEEEEEccCCCEEEE
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC-TVWRVSWNITGTIVAS 170 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~~ 170 (197)
+..+ +.++.|+.|+.+|.++ ++.+-.+..... .-.-+.+..+|++++.
T Consensus 475 gg~v--~~g~~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 475 GGLV--WYATLDGYLKALDNKD-----GKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCEE--EEEcCCCeEEEEECCC-----CCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 5555 6688999999999987 455544432211 1112335567764443
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.66 E-value=15 Score=30.03 Aligned_cols=147 Identities=10% Similarity=-0.034 Sum_probs=82.1
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE---- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---- 97 (197)
..|.++...++ |. |-.|+.++-|..++..+.... .+. .........|.++...+++...+. ++..++
T Consensus 363 ~~v~~i~~d~~--g~-lWigt~~~Gl~~~~~~~~~~~-~~~-~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 363 KVVSSVCDDGQ--GK-LWIGTDGGGINVFENGKRVAI-YNK-ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK 437 (781)
T ss_dssp SCEEEEEECTT--SC-EEEEEBSSCEEEEETTEEEEE-CC------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSC
T ss_pred cceEEEEEcCC--CC-EEEEeCCCcEEEEECCCCeEE-Ecc-CCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCC
Confidence 45888888776 65 445565666888887654321 111 000111456888888888776543 356665
Q ss_pred -eeEecc--cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec---CceecEEEEEEccCCCEEEE
Q psy13207 98 -AHSINA--EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE---DHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -~~~~~~--~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~~ 170 (197)
+..+.. .....|.++... ...+ ..|+. +-+..+|..+... ....... .....|.++...++|++.+.
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~g~l--wigt~-~Gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKNKKI--WIGTH-AGVFVIDLASKKV---IHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTTSEE--EEEET-TEEEEEESSSSSC---CEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred cEEEeccCCCCCCeEEEEEECCCCCE--EEEEC-CceEEEeCCCCeE---EecccCcccccccceeEEEEEcCCCCEEEE
Confidence 222220 124568888777 3445 34445 5577888765211 1111111 11357899999999986654
Q ss_pred EeCCCcEEEEEcCC
Q psy13207 171 SGDDGCVRLWKLKK 184 (197)
Q Consensus 171 ~~~dg~i~iw~~~~ 184 (197)
+.++-+..+|.++
T Consensus 512 -t~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 512 -TFGGGVGIYTPDM 524 (781)
T ss_dssp -ESSSCEEEECTTC
T ss_pred -EcCCCEEEEeCCC
Confidence 4434466787654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.64 E-value=9.4 Score=26.88 Aligned_cols=65 Identities=15% Similarity=0.221 Sum_probs=35.2
Q ss_pred EEeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCcchhhh
Q psy13207 122 ATCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-----CVRLWKLKKKRKKKKE 191 (197)
Q Consensus 122 ~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~ 191 (197)
+.|+.+ ..+.+||..+.+ ...+..+......-..+. .++++++.|+.++ .+.+||+.+ ..|..+
T Consensus 209 v~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~ 282 (302)
T 2xn4_A 209 AVGGHDGPLVRKSVEVYDPTTNA---WRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTT-DKWTVV 282 (302)
T ss_dssp EECCBSSSSBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT-TEEEEC
T ss_pred EECCCCCCcccceEEEEeCCCCC---EeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCC-CeEEEC
Confidence 555543 467889987632 223322221111111222 2677888887653 489999876 446654
Q ss_pred h
Q psy13207 192 E 192 (197)
Q Consensus 192 ~ 192 (197)
+
T Consensus 283 ~ 283 (302)
T 2xn4_A 283 S 283 (302)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.48 E-value=9.5 Score=26.81 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=35.3
Q ss_pred EEeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhh
Q psy13207 122 ATCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 122 ~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~ 191 (197)
+.|+.+ ..+.+||..+.+ ...+..+.........+.+ ++++++.|+.+ ..+.+||+.+ ..|..+
T Consensus 211 v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~ 284 (301)
T 2vpj_A 211 VVGGFDGTAHLSSVEAYNIRTDS---WTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII-DSWEVV 284 (301)
T ss_dssp EECCBCSSSBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT-TEEEEE
T ss_pred EEeCCCCCcccceEEEEeCCCCc---EEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC-CeEEEc
Confidence 555543 468889987632 2333322221111122222 67777888765 3578888876 456554
Q ss_pred h
Q psy13207 192 E 192 (197)
Q Consensus 192 ~ 192 (197)
.
T Consensus 285 ~ 285 (301)
T 2vpj_A 285 T 285 (301)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.23 E-value=10 Score=26.96 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=29.4
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--------------cEEEEEcCCCcchhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--------------CVRLWKLKKKRKKKKE 191 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~ 191 (197)
.+.+||..+.+ ...+..+.........+.+ ++++++.|+.++ .+.+||+.+ .+|..+
T Consensus 213 ~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~ 283 (315)
T 4asc_A 213 SAEVYSITDNK---WAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE-KKWEGV 283 (315)
T ss_dssp EEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT-TEEEEE
T ss_pred eEEEEECCCCe---EEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCC-Chhhhh
Confidence 46788887632 3333332221111122222 567777777642 367788765 346544
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=83.11 E-value=14 Score=28.35 Aligned_cols=32 Identities=6% Similarity=0.244 Sum_probs=28.3
Q ss_pred eecEEEEEEccC---CCEEEEEeCCCcEEEEEcCC
Q psy13207 153 YCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 153 ~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~ 184 (197)
..+|..+.|+|- +..|++-..|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 568999999994 56899999999999999986
|
| >4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-} | Back alignment and structure |
|---|
Probab=82.75 E-value=0.94 Score=39.05 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=30.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
.+.++...++ ..++++-+.|+++|||++.++..+.+..+
T Consensus 239 ~~vs~~~~~~--~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLST--YNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETT--TTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCC--ccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 4455566666 78999999999999999999876655443
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=82.72 E-value=13 Score=27.79 Aligned_cols=152 Identities=7% Similarity=-0.054 Sum_probs=79.3
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccc------eeEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNS------ISIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~ 97 (197)
...+.+++|++.. +.++.+-...+.|..+++......... ...+. .......+++.+.+..|.. .+.+.+
T Consensus 111 ~~~~~~l~~d~~~-~~lywsD~~~~~I~~~~~~g~~~~~~~--~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 111 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTTEEEEEEC------CCC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred cCcceEEeeeecc-CceEEEecCCCeEEEEEcccCCCCCcc--eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 4567889999852 555566566788888887652210000 01111 1235567788774443321 134444
Q ss_pred -----eeEecccCCCceeEEEEcC-CCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDY-YGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+..........|++++ ...++++-. ..+.|...++... .........-.....++++|++..|+.
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-----~~~~~~~~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-----DIYSLVTENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-----SCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-----ccEEEEECCCCceEEEEEEeCCCEEEE
Confidence 1111102234467788873 333224432 3467887777531 111112222346688999987666655
Q ss_pred E-eCCCcEEEEEcCC
Q psy13207 171 S-GDDGCVRLWKLKK 184 (197)
Q Consensus 171 ~-~~dg~i~iw~~~~ 184 (197)
+ +..+.|..+|+..
T Consensus 263 aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 263 VDSKLHSISSIDVNG 277 (400)
T ss_dssp EETTTTEEEEEETTS
T ss_pred EECCCCEEEEEeCCC
Confidence 5 4567888888864
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=82.49 E-value=13 Score=27.57 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=35.6
Q ss_pred EEeeC--CCeEEEEEccCCcccceeeeeeecC-------ceecEEEEEE--ccC-CC-EEEEEeCCCcEEEEEcC
Q psy13207 122 ATCSS--DQNIKVTRDVMGTRFDIETIGNFED-------HYCTVWRVSW--NIT-GT-IVASSGDDGCVRLWKLK 183 (197)
Q Consensus 122 ~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~-------h~~~v~~~~~--~p~-~~-~l~~~~~dg~i~iw~~~ 183 (197)
++.-. +++|.+|++... ...+..+.. -...+..+|+ +|. ++ +++....+|.+..|++.
T Consensus 91 as~R~~~~n~l~vf~iDp~----~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 91 ASNRSEGKNTIEIYAIDGK----NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp EEECSTTCCEEEEEEECTT----TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred EeCCCCCCCeEEEEEECCC----CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Confidence 44444 689999977421 111222211 1145667887 774 44 67778888999999883
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.47 E-value=11 Score=26.65 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=31.9
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~ 191 (197)
..+.+||..+.+ ...+..+.........+.+ ++++++.|+.+ ..+.+||+.+ .+|..+
T Consensus 216 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~~~ 278 (306)
T 3ii7_A 216 DNVEYYDIKLNE---WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET-DKWVAN 278 (306)
T ss_dssp CCEEEEETTTTE---EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT-TEEEEE
T ss_pred ceEEEeeCCCCc---EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC-CeEEeC
Confidence 457888887632 2333222221222222333 67788888754 4688888876 446554
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=82.24 E-value=12 Score=27.00 Aligned_cols=147 Identities=7% Similarity=0.094 Sum_probs=75.5
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEE--
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMY-- 96 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-- 96 (197)
.+...+..+.+.|+ +.+++.+...+..+-.|-. + ..|+... ......+..+.+.+++..++.+ +...
T Consensus 160 ~~~~~~~~~~~~~~--~~~~~~g~~G~~~~S~d~g-G---~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~ 232 (327)
T 2xbg_A 160 EAIGVMRNLNRSPS--GEYVAVSSRGSFYSTWEPG-Q---TAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDP 232 (327)
T ss_dssp SCCCCEEEEEECTT--SCEEEEETTSSEEEEECTT-C---SSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEET
T ss_pred CCCcceEEEEEcCC--CcEEEEECCCcEEEEeCCC-C---CceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecC
Confidence 44557889999997 8777666443333333320 1 1222111 1124567778888887665433 3333
Q ss_pred E-eeE---eccc---CCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 97 E-AHS---INAE---HKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 97 ~-~~~---~~~~---~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
| -.. +... ....+..+.+. +..+ +.++.++.+. +..+.+..+ ..+.........+.++.|.++++ +
T Consensus 233 D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~--~~~g~~g~i~-~S~DgG~tW--~~~~~~~~~~~~~~~v~~~~~~~-~ 306 (327)
T 2xbg_A 233 DNSENWGELLSPLRRNSVGFLDLAYRTPNEV--WLAGGAGALL-CSQDGGQTW--QQDVDVKKVPSNFYKILFFSPDQ-G 306 (327)
T ss_dssp TEEEEECCCBCTTSSCCSCEEEEEESSSSCE--EEEESTTCEE-EESSTTSSC--EECGGGTTSSSCCCEEEEEETTE-E
T ss_pred CCCCeeEeccCCcccCCcceEEEEecCCCEE--EEEeCCCeEE-EeCCCCccc--EEcCccCCCCCCeEEEEEECCCc-e
Confidence 1 111 1101 22357888887 4444 4455577663 333322222 22221112234567888876555 5
Q ss_pred EEEeCCCcEEEEEc
Q psy13207 169 ASSGDDGCVRLWKL 182 (197)
Q Consensus 169 ~~~~~dg~i~iw~~ 182 (197)
+.++.+|.|.-++-
T Consensus 307 ~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 307 FILGQKGILLRYVT 320 (327)
T ss_dssp EEECSTTEEEEECC
T ss_pred EEEcCCceEEEEcC
Confidence 56667888776653
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=82.05 E-value=4.8 Score=32.46 Aligned_cols=65 Identities=11% Similarity=0.041 Sum_probs=36.1
Q ss_pred cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEcc---CCCEEEEEeC------CCcEEEEEcCC
Q psy13207 115 DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNI---TGTIVASSGD------DGCVRLWKLKK 184 (197)
Q Consensus 115 ~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p---~~~~l~~~~~------dg~i~iw~~~~ 184 (197)
....+ +.++.|+.|..+|.+++ +.+-.+.... .....+..+| ++ .++.++. +|.|..+|.++
T Consensus 116 ~~~~v--~v~~~dg~l~alD~~tG-----~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 116 WGDKV--YVGTLDGRLIALDAKTG-----KAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp EBTEE--EEECTTSEEEEEETTTC-----CEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTT
T ss_pred ECCEE--EEEcCCCEEEEEECCCC-----CEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCC
Confidence 35556 77788999999999873 3332222110 0000011111 34 4444433 58899999988
Q ss_pred Ccc
Q psy13207 185 KRK 187 (197)
Q Consensus 185 ~~~ 187 (197)
++.
T Consensus 188 G~~ 190 (668)
T 1kv9_A 188 GKL 190 (668)
T ss_dssp CCE
T ss_pred CcE
Confidence 775
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=80.01 E-value=16 Score=27.07 Aligned_cols=123 Identities=14% Similarity=0.115 Sum_probs=68.1
Q ss_pred cceeEEEE--CCCCCC-cEEEEEeCCCcEEEEEcCCccc-ccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEe
Q psy13207 26 TSVTDVKF--GPKQLG-LVLATCAADGLVRIYEAPDVMN-LSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSI 101 (197)
Q Consensus 26 ~~v~~~~~--~~~~~~-~~l~s~~~dg~v~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (197)
..+..+++ +|.. + .+++....+|.+..|++..... ....++ ++.+
T Consensus 128 ~~pyGlcly~~~~~-g~~yafV~~k~G~~~q~~l~~~~~g~~~~~l------------------------------VR~f 176 (355)
T 3amr_A 128 NEVYGFTLYHSQKT-GKYYAMVTGKEGEFEQYELKADKNGYISGKK------------------------------VRAF 176 (355)
T ss_dssp SSCCCEEEEECTTT-CCEEEEEECSSSEEEEEEEEECTTSCEEEEE------------------------------EEEE
T ss_pred CCeeEEEEEecCCC-CcEEEEEECCCCeEEEEEEEeCCCCcccceE------------------------------EEEe
Confidence 45666777 6642 4 3677777889999988843211 011111 2222
Q ss_pred cccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-Cc-eecEEEEEE--ccCCC-EEEEEe-C
Q psy13207 102 NAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DH-YCTVWRVSW--NITGT-IVASSG-D 173 (197)
Q Consensus 102 ~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h-~~~v~~~~~--~p~~~-~l~~~~-~ 173 (197)
. ....+..+... ...+ ..+-++.-|..++.+.........+..+. ++ ...+..++. .++++ +|++++ .
T Consensus 177 ~--lgsq~EgcvvDd~~g~L--yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 177 K--MNSQTEGMAADDEYGRL--YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp E--CSSCEEEEEEETTTTEE--EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred c--CCCCcceEEEcCCCCeE--EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 2 22345566665 3344 67777766666665432111133443332 22 236777877 45555 666666 6
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
+.++.+||..
T Consensus 253 ~~s~~Vydr~ 262 (355)
T 3amr_A 253 NSSYAIYDRQ 262 (355)
T ss_dssp GTEEEEEESS
T ss_pred CCEEEEEECC
Confidence 7799999986
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 197 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-08 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-05 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 0.002 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-08 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-06 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 4e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-07 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.004 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-05 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 8e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.001 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 0.001 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.003 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.5 bits (119), Expect = 3e-08
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSW 161
H + + V + G + +C+ D+ ++V +D + + H V + +
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRV--------WDYKNKRCMKTLNAHEHFVTSLDF 297
Query: 162 NITGTIVASSGDDGCVRLWK 181
+ T V + D V++W+
Sbjct: 298 HKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.8 bits (99), Expect = 1e-05
Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 12/169 (7%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-----VMNLSQWCLQHEVACPTLASCLT 81
VT V F P V+ + + D +++++ + +Q + +
Sbjct: 19 PVTRVIFHPV--FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 82 WNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF 141
+ + +E H + V+ G + + S D+ IK+
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE-----VQ 131
Query: 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ F H V V N GT++AS +D VR+W + K K +
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 35.9 bits (81), Expect = 0.002
Identities = 7/41 (17%), Positives = 20/41 (48%)
Query: 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
H V RV ++ +++ S+ +D +++W + ++
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 53
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.6 bits (119), Expect = 3e-08
Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 44/179 (24%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
+ + + SV V F G + + + D V+++ + N S + C
Sbjct: 244 DSENESGTGHKDSVYSVVFTRD--GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCE 301
Query: 75 TLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTR 134
HKD + VA + + S D+ +
Sbjct: 302 VTYIG-------------------------HKDFVLSVATTQNDEYILSGSKDRGVLF-- 334
Query: 135 DVMGTRFDIET---IGNFEDHYCTVWRV------SWNITGTIVASSGDDGCVRLWKLKK 184
+D ++ + + H +V V S + A+ D R+WK KK
Sbjct: 335 ------WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.4 bits (103), Expect = 3e-06
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVT-------RDVMGTRFDIETIGNFEDHYCTVW 157
HKD ++ V + G + + S D+++K+ + T + H V
Sbjct: 253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL 312
Query: 158 RVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
V+ + S D V W K
Sbjct: 313 SVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.9 bits (94), Expect = 4e-05
Identities = 28/181 (15%), Positives = 50/181 (27%), Gaps = 5/181 (2%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73
+ S+ S + V F P L + E ++ + Q Q +
Sbjct: 110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 169
Query: 74 PTLASCLTWNHSFSRFNSISI---MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNI 130
S + + + G +A S D+ +
Sbjct: 170 DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAV 229
Query: 131 KVTRDVMGTRFDI--ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188
+V G + + H +V+ V + G V S D V+LW L+ K
Sbjct: 230 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 289
Query: 189 K 189
Sbjct: 290 S 290
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.2 bits (113), Expect = 2e-07
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
H+ I+ + + G AT S D ++ + ++ C + VS++ +
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY---SHDNIICGITSVSFSKS 281
Query: 165 GTIVASSGDDGCVRLWKLKKKRKKKK 190
G ++ + DD +W K +
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGV 307
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.3 bits (108), Expect = 6e-07
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 12/108 (11%)
Query: 76 LASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135
A+ + + + F+ + + I V++ G + D N V
Sbjct: 241 FATG-SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV--- 296
Query: 136 VMGTRFDIET---IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+D G H V + G VA+ D +++W
Sbjct: 297 -----WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 3e-07
Identities = 11/119 (9%), Positives = 29/119 (24%), Gaps = 6/119 (5%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMAT 123
+ L S + + H+ + + + Y G +
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282
Query: 124 CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182
D + R G I +V ++ + + D ++++
Sbjct: 283 TGKDNLLNAWRTPYGAS--IFQSK----ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.2 bits (79), Expect = 0.004
Identities = 14/134 (10%), Positives = 39/134 (29%), Gaps = 3/134 (2%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
+Q ++ ASC+ ++ ++ + + S + + +
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF 228
Query: 120 RMATCSSDQ---NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176
+ C + + + +V + H V + + G S+G D
Sbjct: 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288
Query: 177 VRLWKLKKKRKKKK 190
+ W+ +
Sbjct: 289 LNAWRTPYGASIFQ 302
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.2 bits (105), Expect = 1e-06
Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
+ I A++ ++A C ++ + + + G ++ + ++H V V W
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHI-YEKSGNKW--VQVHELKEHNGQVTGVDWAPD 62
Query: 165 GTIVASSGDDGCVRLW 180
+ + G D +W
Sbjct: 63 SNRIVTCGTDRNAYVW 78
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (95), Expect = 3e-05
Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 12/154 (7%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC------PTLASCLTWNHSFSRFNSI 92
G+ + + + D +R+++ + + L S S + I
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSG--NADSTVKIWDI 244
Query: 93 SIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH 152
++ +K + + T S D +K+ G
Sbjct: 245 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 304
Query: 153 YCTVWRVSWNITGTIVASSGDDGC----VRLWKL 182
VWR+ + T + A +G + +
Sbjct: 305 GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.0 bits (86), Expect = 4e-04
Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 5/124 (4%)
Query: 58 DVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYY 117
+ + + + + + +
Sbjct: 167 YISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIE 226
Query: 118 GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177
+AT S D NI + + ++ I H V + W T+V SSG D C+
Sbjct: 227 EDLVATGSLDTNIFIYS----VKRPMKIIKALNAHKDGVNNLLWETPSTLV-SSGADACI 281
Query: 178 RLWK 181
+ W
Sbjct: 282 KRWN 285
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.9 bits (86), Expect = 5e-04
Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKV-------TRDVMGTRFDIETIGNFEDHYCTVW 157
H I V+ +CS D +KV + + + H +
Sbjct: 13 HDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ 70
Query: 158 RVSWN-ITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ + +VA++ G + +++ ++ + KK
Sbjct: 71 AIERDAFELCLVATTSFSGDLLFYRITREDETKK 104
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 37.5 bits (85), Expect = 5e-04
Identities = 12/170 (7%), Positives = 33/170 (19%), Gaps = 28/170 (16%)
Query: 39 GLVLATCAADGLVRIYEA--PDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIM- 95
L + L + + P + +
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 96 ----------------YEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT 139
Y + + + +
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK------- 302
Query: 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
+D++T + + + + V DDG + + L+K ++
Sbjct: 303 -YDVKT-RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.2 bits (84), Expect = 8e-04
Identities = 17/120 (14%), Positives = 38/120 (31%), Gaps = 3/120 (2%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDV-AYDYYGLRMA 122
++ + + S F+ S + + + + + A
Sbjct: 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFA 267
Query: 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182
T +D I+V DV ++ + + + V G I+ S DG + ++L
Sbjct: 268 TVGADATIRVW-DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII-SLSLDGTLNFYEL 325
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.8 bits (83), Expect = 0.001
Identities = 15/121 (12%), Positives = 39/121 (32%), Gaps = 4/121 (3%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
++ ++ + T ++ + + N H + + + G
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 251
Query: 120 RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179
++A+ S+D+ IK+ + T +TI + W + S +G +
Sbjct: 252 KIASASADKTIKIWN--VATLKVEKTIPVGTRIEDQQLGIIWT--KQALVSISANGFINF 307
Query: 180 W 180
Sbjct: 308 V 308
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.4 bits (82), Expect = 0.001
Identities = 17/142 (11%), Positives = 43/142 (30%), Gaps = 7/142 (4%)
Query: 44 TCAADGLVRIYEAPDVMNLSQWC-LQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSIN 102
+ + D ++++ + + +AC L + S + + +
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 212
Query: 103 AEHKDLIHDVAYDYYGLRMATCSSDQNIKV----TRDVMGTRFDIETIGNFEDHYCTVWR 158
+ R+ + + D IKV + +H V+R
Sbjct: 213 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 272
Query: 159 VSWNITGTIVASSGDDGCVRLW 180
+ ++ + SS D + +W
Sbjct: 273 LQFD--EFQIVSSSHDDTILIW 292
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 35.3 bits (79), Expect = 0.003
Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 3/123 (2%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
+ L + + + + H + V++ +
Sbjct: 178 HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV 237
Query: 120 RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179
R+AT S D ++ V + I G H + + T + S+G D ++
Sbjct: 238 RLATGSLDNSVIVWNMNKPSDHPIIIKG---AHAMSSVNSVIWLNETTIVSAGQDSNIKF 294
Query: 180 WKL 182
W +
Sbjct: 295 WNV 297
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.96 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.96 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.95 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.95 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.94 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.94 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.94 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.94 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.93 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.93 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.93 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.93 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.92 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.91 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.9 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.9 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.9 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.9 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.87 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.87 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.87 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.85 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.84 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.82 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.81 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.81 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.78 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.78 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.75 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.73 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.72 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.66 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.63 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.63 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.46 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.43 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.35 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.31 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.28 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.27 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.25 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.23 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.2 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.06 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.0 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.89 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.7 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.68 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.41 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.31 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.26 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.18 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.07 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.0 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.89 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.88 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.84 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.82 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.74 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.63 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.55 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.35 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.22 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.89 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.87 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.74 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.52 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 95.76 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 93.95 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 93.11 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 93.03 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 91.3 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 91.0 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 89.55 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 85.98 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.3e-27 Score=173.96 Aligned_cols=166 Identities=14% Similarity=0.208 Sum_probs=134.5
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccccee--
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSIS-- 93 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 93 (197)
....+|+||.++|++++|+|+ +.+|+||+.||+|+|||+.+++.+..+.. +...|.+++|+|++.+++++.
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~--~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~l~~~~~d 118 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTD--SRLLVSASQDGKLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEETTTTEEEEEEEC-----SCSCEEEEEECTTSSEEEEEETT
T ss_pred eeeEEECCCCCCEEEEEECCC--CCEEEEEECCCceeeeecccceeEEEEec-----ccccEEeeEeeccceeeeeeccc
Confidence 455689999999999999999 99999999999999999998765543321 267899999999998876541
Q ss_pred --------------------------------------------------------------------------------
Q psy13207 94 -------------------------------------------------------------------------------- 93 (197)
Q Consensus 94 -------------------------------------------------------------------------------- 93 (197)
T Consensus 119 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (340)
T d1tbga_ 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198 (340)
T ss_dssp CCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred ceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccce
Confidence
Q ss_pred ----------EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee--eecCceec
Q psy13207 94 ----------IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG--NFEDHYCT 155 (197)
Q Consensus 94 ----------~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~--~~~~h~~~ 155 (197)
++|| +..+. +|...|++++|+++.-+|++|+.|+.|++||++. ...+. ....+...
T Consensus 199 ~~~~~~d~~v~i~d~~~~~~~~~~~-~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~-----~~~~~~~~~~~~~~~ 272 (340)
T d1tbga_ 199 FVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRA-----DQELMTYSHDNIICG 272 (340)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----TEEEEEECCTTCCSC
T ss_pred eEEeecCceEEEEECCCCcEEEEEe-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc-----cccccccccccccCc
Confidence 4555 45566 7999999999995544449999999999999976 33333 34456778
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 156 VWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
|.+++|+|++++|++|+.||.|++||+.+++....+..|
T Consensus 273 i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H 311 (340)
T d1tbga_ 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311 (340)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred eEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCC
Confidence 999999999999999999999999999988777666544
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=2e-27 Score=176.42 Aligned_cols=181 Identities=15% Similarity=0.163 Sum_probs=141.9
Q ss_pred ccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 7 QSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 7 ~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
..++.+++|+.. ..|.+|.++|.+++|+|+ +++|++|+.|++|++||+.+......... ..+...+.+
T Consensus 26 ~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~--~~~l~s~s~D~~i~vWd~~~~~~~~~~~~---~~~~~~v~~ 100 (371)
T d1k8kc_ 26 PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYVWTLKGRTWKPTLVI---LRINRAARC 100 (371)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEEEETTEEEEEEEC---CCCSSCEEE
T ss_pred eCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCC--CCEEEEEECCCeEEEEeeccccccccccc---ccccccccc
Confidence 467889999874 347899999999999998 99999999999999999986543222211 112568999
Q ss_pred EEEccCCCcccce-----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc-----
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR----- 140 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~----- 140 (197)
++|+|+++.++++ +++|+ .......|...|.+++|+|+.-+|++|+.|+.|++||......
T Consensus 101 i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~ 180 (371)
T d1k8kc_ 101 VRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 180 (371)
T ss_dssp EEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred cccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccc
Confidence 9999999998765 68887 2222237889999999996555559999999999999864211
Q ss_pred --------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 141 --------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 141 --------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.....+....+|...|.+++|+|++++|++++.|+.|++||+.++..+..+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 240 (371)
T d1k8kc_ 181 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240 (371)
T ss_dssp CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred cccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeee
Confidence 0123456667889999999999999999999999999999998877655543
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=3.9e-27 Score=171.24 Aligned_cols=168 Identities=17% Similarity=0.283 Sum_probs=138.0
Q ss_pred ccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEcc
Q psy13207 11 CLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNH 84 (197)
Q Consensus 11 ~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 84 (197)
.+.+|++. ..+.+|...|++++|+|+ |++|++|+.||+|+|||+........ ..+. +..+|.+++|+|
T Consensus 39 ~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~--g~~latg~~dg~i~iwd~~~~~~~~~----~~~~~~~~~v~~v~~s~ 112 (311)
T d1nr0a1 39 SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS--GYYCASGDVHGNVRIWDTTQTTHILK----TTIPVFSGPVKDISWDS 112 (311)
T ss_dssp EEEEEETTCSSCCEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEESSSTTCCEE----EEEECSSSCEEEEEECT
T ss_pred EEEEEECCCCceeEEEcCCCCCEEEEEEeCC--CCeEeccccCceEeeeeeeccccccc----cccccccCccccccccc
Confidence 45566543 357899999999999999 99999999999999999988754321 1222 267899999999
Q ss_pred CCCcccce-------eEEEE------eeEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 85 SFSRFNSI-------SIMYE------AHSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 85 ~~~~~~~~-------~~~~~------~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
++++++++ +++|+ ...+. +|...|.+++|+++ ..+|++|+.|+.|++||+++ .+....+.
T Consensus 113 d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~-~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~-----~~~~~~~~ 186 (311)
T d1nr0a1 113 ESKRIAAVGEGRERFGHVFLFDTGTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----FKFKSTFG 186 (311)
T ss_dssp TSCEEEEEECCSSCSEEEEETTTCCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----BEEEEEEC
T ss_pred ccccccccccccccccccccccccccccccc-ccccccccccccccceeeecccccccccccccccc-----cccccccc
Confidence 99988665 57888 55566 78999999999933 22348999999999999987 67788888
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.|...|.+++|+|+++++++++.|+.|++||+++......
T Consensus 187 ~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~ 226 (311)
T d1nr0a1 187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 226 (311)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cccccccccccCcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999987665443
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.95 E-value=1.5e-26 Score=166.45 Aligned_cols=164 Identities=14% Similarity=0.185 Sum_probs=120.6
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
.+.+.+.||.++|++++|+|+ +++|+||+.||+|++||+.+++.+..+.. .+...|.+++|+|++..++++
T Consensus 3 ~~~~~~~GH~~~V~~l~~s~d--g~~l~s~s~Dg~v~vWd~~~~~~~~~~~~----~h~~~v~~v~~~~~g~~~~~~~d~ 76 (299)
T d1nr0a2 3 SIDQVRYGHNKAITALSSSAD--GKTLFSADAEGHINSWDISTGISNRVFPD----VHATMITGIKTTSKGDLFTVSWDD 76 (299)
T ss_dssp EEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEECSSC----SCSSCEEEEEECTTSCEEEEETTT
T ss_pred ccceEcCCCCCCcEEEEECCC--CCEEEEEcCCCeEEEEECCCCcEEEEEcC----CCCCcEEEEEeeccceeeccccee
Confidence 356788999999999999999 99999999999999999987654432211 113455666666655443222
Q ss_pred --------------------------------------------------------------------------------
Q psy13207 93 -------------------------------------------------------------------------------- 92 (197)
Q Consensus 93 -------------------------------------------------------------------------------- 92 (197)
T Consensus 77 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 156 (299)
T d1nr0a2 77 HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ 156 (299)
T ss_dssp EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred eEEEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred ---eEEEEe-----eE-ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 93 ---SIMYEA-----HS-INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 93 ---~~~~~~-----~~-~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
+.+|++ .. ....|...|.+++|+++.-+|++++.|+.|++||..+.. .......+.+|...|.+++|+|
T Consensus 157 dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~--~~~~~~~~~~h~~~v~~l~~s~ 234 (299)
T d1nr0a2 157 DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF--ELAHTNSWTFHTAKVACVSWSP 234 (299)
T ss_dssp TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT--EESCCCCCCCCSSCEEEEEECT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc
Confidence 144441 11 112578889999999544444999999999999986531 1233455678999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
++++|++|+.||.|++||+++...
T Consensus 235 ~~~~l~sgs~dg~i~iwd~~~~~~ 258 (299)
T d1nr0a2 235 DNVRLATGSLDNSVIVWNMNKPSD 258 (299)
T ss_dssp TSSEEEEEETTSCEEEEETTCTTS
T ss_pred cccceEEEcCCCEEEEEECCCCCc
Confidence 999999999999999999987654
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.95 E-value=2.5e-26 Score=166.95 Aligned_cols=179 Identities=16% Similarity=0.271 Sum_probs=139.2
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeC--CCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAA--DGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
+..|+++++|++. ..+.+|.++|.+++|+|+ +++|++++. +..+++|++.+.+....+. .+...
T Consensus 76 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d--~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~-----~h~~~ 148 (311)
T d1nr0a1 76 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE--SKRIAAVGEGRERFGHVFLFDTGTSNGNLT-----GQARA 148 (311)
T ss_dssp EETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT--SCEEEEEECCSSCSEEEEETTTCCBCBCCC-----CCSSC
T ss_pred cccCceEeeeeeeccccccccccccccCcccccccccc--cccccccccccccccccccccccccccccc-----ccccc
Confidence 5678999999864 347789999999999998 999998875 4679999998876543322 12567
Q ss_pred eeeEEEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce-
Q psy13207 77 ASCLTWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI- 143 (197)
Q Consensus 77 ~~~~~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~- 143 (197)
|.+++|+|++++ ++++ +++|| ...+. .|...|.++.|+|+.-+|++++.|+.|++||.++......
T Consensus 149 v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~-~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~ 227 (311)
T d1nr0a1 149 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227 (311)
T ss_dssp EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred cccccccccceeeecccccccccccccccccccccccc-cccccccccccCccccccccccccccccccccccccccccc
Confidence 999999999987 4433 79999 44555 7899999999995544459999999999999976321100
Q ss_pred -eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 144 -ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 144 -~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.......+|...|.+++|+|++++|++|+.||+|++||+++++..+++.
T Consensus 228 ~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~ 277 (311)
T d1nr0a1 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 277 (311)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEE
Confidence 0011234688999999999999999999999999999999887666553
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1e-25 Score=164.97 Aligned_cols=163 Identities=16% Similarity=0.123 Sum_probs=134.4
Q ss_pred eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 18 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
.+++ +|..+|.+++|+|+ |++|+||+ ||.|+|||+.+..............+...|.+++|+|++++|+++
T Consensus 45 ~~~~-~H~~~V~~v~fs~~--g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~ 120 (337)
T d1gxra_ 45 INTL-NHGEVVCAVTISNP--TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120 (337)
T ss_dssp EEEE-CCSSCCCEEEECSS--SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred EEEC-CCCCcEEEEEECCC--CCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccc
Confidence 3445 79999999999999 99999997 899999999876554433322233346789999999999998765
Q ss_pred eEEEE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 93 SIMYE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 93 ~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+++|+ ...+. .|...+..++|+++...+++++.|+.|++|++++ .+......+|...|.+++|+|+
T Consensus 121 i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~-----~~~~~~~~~~~~~v~~l~~s~~ 194 (337)
T d1gxra_ 121 LSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp EEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTT
T ss_pred cccccccccccccccccc-cccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccc
Confidence 79999 34455 7889999999996555559999999999999976 5677778889999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 165 GTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.++++++.|+.+++||+++++.+..
T Consensus 195 ~~~~~~~~~d~~v~i~d~~~~~~~~~ 220 (337)
T d1gxra_ 195 GTKLWTGGLDNTVRSWDLREGRQLQQ 220 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ccccccccccccccccccccceeecc
Confidence 99999999999999999988765443
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=3.9e-25 Score=160.62 Aligned_cols=169 Identities=14% Similarity=0.163 Sum_probs=134.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccce---------------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQW--------------- 65 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~--------------- 65 (197)
+..|+++++|+.. ..+..|..+|.+++|+|+ +.++++|+.|+.+++|+..........
T Consensus 73 gs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (340)
T d1tbga_ 73 ASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS--GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150 (340)
T ss_dssp EETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTT--SSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEE
T ss_pred EECCCceeeeecccceeEEEEecccccEEeeEeecc--ceeeeeecccceeecccccccccccccceecccccccccccc
Confidence 5678999999864 457889999999999999 999999999999999986543210000
Q ss_pred ------------------------------------------------------------------eccceec-cCCCee
Q psy13207 66 ------------------------------------------------------------------CLQHEVA-CPTLAS 78 (197)
Q Consensus 66 ------------------------------------------------------------------~~~~~~~-~~~~~~ 78 (197)
.....+. +...|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~ 230 (340)
T d1tbga_ 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230 (340)
T ss_dssp EEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEE
T ss_pred cccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeE
Confidence 0000111 256788
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+++|+|++.+++++ +++|+ +..+. ..+...+.+++|+++.-+|++|+.||.|++||+.+ .+++
T Consensus 231 ~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~-----~~~~ 305 (340)
T d1tbga_ 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-----ADRA 305 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTT-----CCEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCC-----CcEE
Confidence 99999999998765 79999 22222 15667899999995544449999999999999976 6788
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
..+.+|..+|++++|+|++++|++|+.||+|++||
T Consensus 306 ~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 89999999999999999999999999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.9e-25 Score=160.91 Aligned_cols=161 Identities=12% Similarity=0.155 Sum_probs=133.1
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.++.|++. ....+|...|.+++|+++ +..+++++.|+.+++||+++++.+.. ......+.+++
T Consensus 160 ~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~--~~~~~~~~~d~~v~i~d~~~~~~~~~------~~~~~~i~~l~ 231 (337)
T d1gxra_ 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGRQLQQ------HDFTSQIFSLG 231 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEE------EECSSCEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccceeecc------cccccceEEEE
Confidence 456677777643 356789999999999998 99999999999999999988765433 23367899999
Q ss_pred EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
|+|+++.++++ +++|+ ..... .|...|.+++|+++.-+|++++.|+.|++||.++ .+.+..+ .
T Consensus 232 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~-----~~~~~~~-~ 304 (337)
T d1gxra_ 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY-----GASIFQS-K 304 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSSCEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEEE-E
T ss_pred Ecccccccceecccccccccccccccccccc-ccccccceEEECCCCCEEEEEeCCCeEEEEECCC-----CCEEEEc-c
Confidence 99999998765 79999 44455 7899999999995443449999999999999976 4555544 4
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
|...|.+++|+|++++|++|+.||+|++||+
T Consensus 305 ~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 305 ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 6789999999999999999999999999997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=3.7e-25 Score=158.70 Aligned_cols=160 Identities=21% Similarity=0.249 Sum_probs=133.3
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+|.+|.++|++++|+|+ +++|+||+.||+|+|||+.+++.+..+. .+...|.+++|+|++..++.+ +
T Consensus 11 ~~L~GH~~~I~~l~~sp~--~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~~~~~~~~~~ 83 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPV--FSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISFDHSGKLLASCSADMTI 83 (317)
T ss_dssp CEEECCSSCEEEEEECSS--SSEEEEEESSSCEEEEETTTCCCCEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred EEEcCCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCCCEEEEEe-----CCCCcEEEEeeeccccccccccccccc
Confidence 468999999999999998 9999999999999999999876554332 126789999999999988665 4
Q ss_pred EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
..|+ ...+. .|...+.++.|+++.-.+++++.|+.+++||+++ ...+..+.+|...+.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (317)
T d1vyhc1 84 KLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT-----GYCVKTFTGHREWVRMVRPNQDGTL 157 (317)
T ss_dssp CEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECTTSSE
T ss_pred ccccccccccccccc-cccccceeeeccCCCceEEeeccCcceeEeeccc-----ceeeeEEccCCCcceeeecccCCCE
Confidence 5666 33344 7888999999994433349999999999999987 6677788899999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
|++++.|+.|++|++.+......+
T Consensus 158 l~~~~~d~~v~~~~~~~~~~~~~~ 181 (317)
T d1vyhc1 158 IASCSNDQTVRVWVVATKECKAEL 181 (317)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEeCCCeEEEEeeccceeeEEE
Confidence 999999999999999887655443
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=2.1e-24 Score=160.05 Aligned_cols=154 Identities=14% Similarity=0.141 Sum_probs=123.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
...+|+|++|+|+ |++||+|+.||.|+|||+.+++.. ....+. +..+|.+++|+|++++++++ +++|+
T Consensus 6 ~~~pIt~~~~s~d--g~~la~~~~~~~i~iw~~~~~~~~----~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd 79 (371)
T d1k8kc_ 6 LVEPISCHAWNKD--RTQIAICPNNHEVHIYEKSGNKWV----QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79 (371)
T ss_dssp CSSCCCEEEECTT--SSEEEEECSSSEEEEEEEETTEEE----EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CCCCeEEEEECCC--CCEEEEEeCCCEEEEEECCCCCEE----EEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEe
Confidence 3578999999999 999999999999999998765422 223333 36789999999999998766 89999
Q ss_pred --------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE
Q psy13207 98 --------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 98 --------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 169 (197)
...+. .|...|.+++|+|+.-.|++++.|+.+++|+....... .........|...|.+++|+|++++|+
T Consensus 80 ~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~l~ 157 (371)
T d1k8kc_ 80 LKGRTWKPTLVIL-RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW-WVCKHIKKPIRSTVLSLDWHPNSVLLA 157 (371)
T ss_dssp EETTEEEEEEECC-CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE-EEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred ecccccccccccc-cccccccccccccccccceeecccCcceeeeeeccccc-cccccccccccccccccccccccccee
Confidence 22334 68889999999954444499999999999998753221 223445667889999999999999999
Q ss_pred EEeCCCcEEEEEcCCC
Q psy13207 170 SSGDDGCVRLWKLKKK 185 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~ 185 (197)
+|+.|++|++|+....
T Consensus 158 s~s~D~~v~v~~~~~~ 173 (371)
T d1k8kc_ 158 AGSCDFKCRIFSAYIK 173 (371)
T ss_dssp EEETTSCEEEEECCCT
T ss_pred ccccCcEEEEEeeccC
Confidence 9999999999998653
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=2.2e-24 Score=154.64 Aligned_cols=162 Identities=18% Similarity=0.350 Sum_probs=132.6
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.+++|+.. ..+.+|...+.+++|+|+ +.+|++++.|+.|++|++.+.+....+. .....+.++.
T Consensus 120 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~-----~~~~~i~~~~ 192 (317)
T d1vyhc1 120 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELR-----EHRHVVECIS 192 (317)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEE
T ss_pred ccCcceeEeecccceeeeEEccCCCcceeeecccC--CCEEEEEeCCCeEEEEeeccceeeEEEe-----cCCCCceEEE
Confidence 456778888754 467889999999999998 9999999999999999998876443222 1256778888
Q ss_pred EccCCCccc--------------------c-----eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeE
Q psy13207 82 WNHSFSRFN--------------------S-----ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNI 130 (197)
Q Consensus 82 ~~~~~~~~~--------------------~-----~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i 130 (197)
|+|+..... + .+++|+ +..+. +|...|.+++|+++.-+|++++.||.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i 271 (317)
T d1vyhc1 193 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTL 271 (317)
T ss_dssp ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred EeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEe-CCCCCEEEEEECCCCCEEEEEECCCeE
Confidence 888765431 1 157888 56777 899999999999443333999999999
Q ss_pred EEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 131 KVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
++||+++ .+++..+.+|...|++++|+|++++|++|+.||+|++||
T Consensus 272 ~iwd~~~-----~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 272 RVWDYKN-----KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEECCTT-----SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 9999976 677888999999999999999999999999999999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=3.7e-25 Score=165.30 Aligned_cols=139 Identities=24% Similarity=0.311 Sum_probs=105.0
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEec
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSIN 102 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (197)
.+...+.+++|+|+ + +|++|+.||+|+|||+.+++.+..+.... .+.
T Consensus 182 ~~~~~~~~v~~s~d--g-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~------------------------------~l~ 228 (393)
T d1sq9a_ 182 TPSQFATSVDISER--G-LIATGFNNGTVQISELSTLRPLYNFESQH------------------------------SMI 228 (393)
T ss_dssp SSCCCCCEEEECTT--S-EEEEECTTSEEEEEETTTTEEEEEEECCC---------------------------------
T ss_pred CCCCcEEEEEECCC--C-EEEEEeCCCcEEEEeeccccccccccccc------------------------------ccc
Confidence 45567899999997 7 88999999999999999876544333221 222
Q ss_pred ccCCCceeEEEEcCCCeEEEEeeCCC---eEEEEEccCCccc--------ceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 103 AEHKDLIHDVAYDYYGLRMATCSSDQ---NIKVTRDVMGTRF--------DIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 103 ~~~~~~i~~~~~~~~~~~~~s~~~d~---~i~~~d~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
+|...|++++|+|+.-+|++|+.|+ .|++||++++... .......+.+|...|++++|+|++++|+++
T Consensus 229 -~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~ 307 (393)
T d1sq9a_ 229 -NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 307 (393)
T ss_dssp -CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred -cccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEE
Confidence 7899999999995555559999886 5899999763211 011222345899999999999999999999
Q ss_pred eCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
+.|++|++||+++++.+.++..|.
T Consensus 308 s~D~~v~vWd~~~g~~~~~l~gH~ 331 (393)
T d1sq9a_ 308 GWDGKLRFWDVKTKERITTLNMHC 331 (393)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCG
T ss_pred CCCCEEEEEECCCCCEEEEECCcC
Confidence 999999999999988777765544
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=5.7e-24 Score=155.11 Aligned_cols=172 Identities=16% Similarity=0.149 Sum_probs=130.1
Q ss_pred eecCC-CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc--ceec-cCCCeeeEEEccCCCcccce---
Q psy13207 20 NLVDS-RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ--HEVA-CPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 20 ~~~~h-~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~--- 92 (197)
.+.+| ...|++++|+|..++.+|++|+.||+|+|||+...+........ .... ...++.+++|+++++.++.+
T Consensus 57 ~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~ 136 (325)
T d1pgua1 57 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136 (325)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred EEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeecc
Confidence 45677 46899999999644789999999999999999876554433221 1122 26789999999999987654
Q ss_pred ----eEEEE------eeEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ----SIMYE------AHSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ----~~~~~------~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+.+|+ +..+. +|...|.+++|+++ ..++++++.|+.+++||.+... ..........|...|.+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~v~~v~~ 213 (325)
T d1pgua1 137 RDNFGVFISWDSGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHKQGSFVRDVEF 213 (325)
T ss_dssp SSCSEEEEETTTCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSCTTCCEEEEEE
T ss_pred ccceEEEEeecccccceeee-ecccccccccccccccceEEEeecccccccccccccc--cceecccccCCCCccEEeee
Confidence 46676 56667 89999999999932 2234889999999999986521 11223334567888999999
Q ss_pred ccC-CCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 162 NIT-GTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 162 ~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
+|+ +.+|++++.|+.|++||+++++.+..+..+
T Consensus 214 ~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~ 247 (325)
T d1pgua1 214 SPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD 247 (325)
T ss_dssp CSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT
T ss_pred ccccceeccccccccceeeeeecccccccccccc
Confidence 996 689999999999999999988877666543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=6.9e-24 Score=157.16 Aligned_cols=171 Identities=18% Similarity=0.222 Sum_probs=128.6
Q ss_pred ccccccceeeeeee----ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce-e-ccCCCeeeE
Q psy13207 7 QSEKCLNQWTRRSN----LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE-V-ACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~~----~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 80 (197)
..++.++.|+.... ...+.....++.+.|.+ +.+|++++.||.|++|+..++.....+..... . .+...|.++
T Consensus 182 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 260 (388)
T d1erja_ 182 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD-GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 260 (388)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT-CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred ccceeeeeeeccccccccccccccccccccccCCC-CCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEE
Confidence 45677888875421 22334445555665532 89999999999999999998766544332211 1 126789999
Q ss_pred EEccCCCcccce-----eEEEE------------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
+|+|++++++++ +++|+ ..... .|...|.+++|+++.-+|++|+.||.|++||+++
T Consensus 261 ~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~ 339 (388)
T d1erja_ 261 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 339 (388)
T ss_dssp EECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred EECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecc-cccceEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999998765 79998 12233 5788999999994433349999999999999987
Q ss_pred CcccceeeeeeecCceecEEEEEE------ccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 138 GTRFDIETIGNFEDHYCTVWRVSW------NITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 138 ~~~~~~~~~~~~~~h~~~v~~~~~------~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+++..+.+|...|.++++ +|++++|++|+.||+|++|+++.
T Consensus 340 -----~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 340 -----GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp -----CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred -----CcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeeee
Confidence 6788899999999999875 67899999999999999999853
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=2.1e-23 Score=152.08 Aligned_cols=173 Identities=14% Similarity=0.172 Sum_probs=133.3
Q ss_pred cccccccceeeeee-------------eecCCCcceeEEEECCCCCCcEEEEEe--CCCcEEEEEcCCcccccceeccce
Q psy13207 6 LQSEKCLNQWTRRS-------------NLVDSRTSVTDVKFGPKQLGLVLATCA--ADGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------------~~~~h~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
+..|+++++|+... .+..|.++|.+++|+|+ +++|++++ .++.+++|+..+++.+..+.
T Consensus 83 gs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---- 156 (325)
T d1pgua1 83 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDSGNSLGEVS---- 156 (325)
T ss_dssp EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTTCCEEEECC----
T ss_pred EeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCC--CCccceeeccccceEEEEeecccccceeee----
Confidence 56789999998753 24568899999999998 88887765 47789999998775443222
Q ss_pred eccCCCeeeEEEccCCCcc-cce-----eEEEE------ee---EecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEE
Q psy13207 71 VACPTLASCLTWNHSFSRF-NSI-----SIMYE------AH---SINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTR 134 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~------~~---~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d 134 (197)
.+...+.+++|+|++..+ +++ +++|+ .. ... .|...|.+++|+|+ .-+|++++.|+.|++||
T Consensus 157 -~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd 234 (325)
T d1pgua1 157 -GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH-KQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234 (325)
T ss_dssp -SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS-CTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred -ecccccccccccccccceEEEeecccccccccccccccceeccccc-CCCCccEEeeeccccceeccccccccceeeee
Confidence 136789999999998874 323 78998 11 223 57788999999943 23349999999999999
Q ss_pred ccCCcccceeeeeeecCceecEEEEEEc---cCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 135 DVMGTRFDIETIGNFEDHYCTVWRVSWN---ITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~---p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.++ .+.+..+.+|..++.++.|+ |+|++|++++.|++|+|||+++++..+.+
T Consensus 235 ~~~-----~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~ 289 (325)
T d1pgua1 235 GKS-----GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW 289 (325)
T ss_dssp TTT-----CCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ecc-----ccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 977 67778888887776655555 68999999999999999999987765544
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=2.3e-22 Score=148.86 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=122.0
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc-------------eeccCCCeeeEEEccCCCcc
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH-------------EVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 89 (197)
+|.+.|+|++|+|+ |++||+|+ |++|+|||+.+++.+..+.... ...+...|.+++|+|+++++
T Consensus 60 ~H~~~V~~l~fs~d--g~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 136 (388)
T d1erja_ 60 DHTSVVCCVKFSND--GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136 (388)
T ss_dssp ECSSCCCEEEECTT--SSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCcEEEEEECCC--CCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcc
Confidence 69999999999999 99999987 8999999998876544332111 01125669999999999999
Q ss_pred cce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE
Q psy13207 90 NSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158 (197)
Q Consensus 90 ~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~ 158 (197)
+++ +++|+ +.... +|...|.+++|+++...+++++.++.+++||.++ .........+... .+
T Consensus 137 ~s~~~dg~v~i~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~~~~-~~ 209 (388)
T d1erja_ 137 ATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT-----GQCSLTLSIEDGV-TT 209 (388)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----TEEEEEEECSSCE-EE
T ss_pred eecccccccccccccccccccccc-cccccccccccccccccccccccceeeeeeeccc-----ccccccccccccc-cc
Confidence 876 79999 55566 8999999999995444449999999999999976 4444444444444 44
Q ss_pred EEEc-cCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 159 VSWN-ITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 159 ~~~~-p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.++ +++++|++++.||.|++|+.++......
T Consensus 210 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~ 242 (388)
T d1erja_ 210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 242 (388)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ccccCCCCCeEEEEcCCCeEEEeecccCcccee
Confidence 5555 4899999999999999999988765443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=2.4e-23 Score=148.65 Aligned_cols=168 Identities=15% Similarity=0.207 Sum_probs=127.6
Q ss_pred cccccccceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-------------------------
Q psy13207 6 LQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM------------------------- 60 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~------------------------- 60 (197)
+..|+++++|++.....+|...|.++.++++ ..+++++.|+++++|++...+
T Consensus 27 gs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~~~---~~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (287)
T d1pgua2 27 GSYDGRIMEWSSSSMHQDHSNLIVSLDNSKA---QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL 103 (287)
T ss_dssp EETTSCEEETTTTEEECCCCSCEEEEECCST---TCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEE
T ss_pred EeCCCeEEEEECCCCCCCCCCCEEEEEecCC---CeEEEEeeccccccccccccccccceeeeeeccCCceEEEeecccc
Confidence 5778999999998888899999999999874 457899999999999764311
Q ss_pred ---------ccc-----------------------------ceec-----ccee--ccCCCeeeEEEccCCCcccce---
Q psy13207 61 ---------NLS-----------------------------QWCL-----QHEV--ACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 61 ---------~~~-----------------------------~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
... .+.. ...+ .....+.+++|+|++.+++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d 183 (287)
T d1pgua2 104 LILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVM 183 (287)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccccccc
Confidence 000 0000 0000 114568899999999998765
Q ss_pred --eEEEE------e-eEecccCCCceeEEEEcCC----------CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce
Q psy13207 93 --SIMYE------A-HSINAEHKDLIHDVAYDYY----------GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY 153 (197)
Q Consensus 93 --~~~~~------~-~~~~~~~~~~i~~~~~~~~----------~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~ 153 (197)
+++|+ . ..+. .|...|.+++|+|. .-+|++|+.|+.|++||++.. ...+..+.+|.
T Consensus 184 g~i~i~d~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~----~~~~~~~~~h~ 258 (287)
T d1pgua2 184 GKILLYDLQSREVKTSRWA-FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP----MKIIKALNAHK 258 (287)
T ss_dssp SCEEEEETTTTEEEECCSC-CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT----TCCEEETTSST
T ss_pred ccccceeeccccccccccc-ccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCC----CeEEEEeCCCC
Confidence 79999 1 2234 78999999999732 223499999999999998642 45667778999
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
..|++++|+|++ .|++++.|++|++|++
T Consensus 259 ~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 259 DGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp TCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred CCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 999999999986 5889999999999986
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.90 E-value=1e-22 Score=146.12 Aligned_cols=163 Identities=18% Similarity=0.231 Sum_probs=118.8
Q ss_pred cccceeeeeeee-cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc
Q psy13207 10 KCLNQWTRRSNL-VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR 88 (197)
Q Consensus 10 ~~~~~w~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (197)
+.+++|+..... ......+.+++|+|+ +++|++|+.||.|++||+.+.+... .....+...+.+++|+|++.+
T Consensus 120 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~g~~dg~i~~~d~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~ 193 (299)
T d1nr0a2 120 KHIAIYSHGKLTEVPISYNSSCVALSND--KQFVAVGGQDSKVHVYKLSGASVSE----VKTIVHPAEITSVAFSNNGAF 193 (299)
T ss_dssp SEEEEEETTEEEEEECSSCEEEEEECTT--SCEEEEEETTSEEEEEEEETTEEEE----EEEEECSSCEEEEEECTTSSE
T ss_pred cccccccccccccccccccccccccccc--ccccccccccccccccccccccccc----ccccccccccccccccccccc
Confidence 445666533221 123346788999998 9999999999999999997654321 122334678999999999999
Q ss_pred ccce-----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-e
Q psy13207 89 FNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-Y 153 (197)
Q Consensus 89 ~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-~ 153 (197)
++++ +++|+ ...+. .|...|++++|+++.-+|++|+.|+.|++||+++.. .........| .
T Consensus 194 l~~~~~d~~i~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~---~~~~~~~~~~~~ 269 (299)
T d1nr0a2 194 LVATDQSRKVIPYSVANNFELAHTNSWT-FHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS---DHPIIIKGAHAM 269 (299)
T ss_dssp EEEEETTSCEEEEEGGGTTEESCCCCCC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT---SCCEEETTSSTT
T ss_pred cccccccccccccccccccccccccccc-ccccccccccccccccceEEEcCCCEEEEEECCCCC---cceEEEecCCCC
Confidence 8765 79999 23344 688999999999555445999999999999997632 2223333333 4
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..+.++.| +++++|++++.|++|++||+.
T Consensus 270 ~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 270 SSVNSVIW-LNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp SCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred CcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence 56666655 567899999999999999984
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=1.9e-22 Score=145.69 Aligned_cols=169 Identities=13% Similarity=0.130 Sum_probs=113.3
Q ss_pred eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCC-cccce---
Q psy13207 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFS-RFNSI--- 92 (197)
Q Consensus 17 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 92 (197)
+...+++|.+.|++++|+|+ +++|++|+.||+|+|||+....... .+.....+..+|.+++|+|++. .++++
T Consensus 3 ~v~~~~~h~d~I~~l~fsp~--~~~L~s~s~Dg~v~iwd~~~~~~~~--~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d 78 (342)
T d1yfqa_ 3 IVQIEQAPKDYISDIKIIPS--KSLLLITSWDGSLTVYKFDIQAKNV--DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGG--GTEEEEEETTSEEEEEEEETTTTEE--EEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred eEEcCCCCCCCEEEEEEeCC--CCEEEEEECCCeEEEEEccCCCcce--EEEEecCCCCCEEEEEEeCCCCCEEEEcccc
Confidence 34567899999999999999 9999999999999999997654332 2223334578899999998764 45544
Q ss_pred --eEEEE-----------------------------------------------------eeEecccCC--CceeEEEEc
Q psy13207 93 --SIMYE-----------------------------------------------------AHSINAEHK--DLIHDVAYD 115 (197)
Q Consensus 93 --~~~~~-----------------------------------------------------~~~~~~~~~--~~i~~~~~~ 115 (197)
+++|+ ..... .+. .......+.
T Consensus 79 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 157 (342)
T d1yfqa_ 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN-SNNTKVKNKIFTMD 157 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC-SSSSSSCCCEEEEE
T ss_pred cceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccc-cccccceeeeeeee
Confidence 55555 00000 111 111222223
Q ss_pred --CCCeEEEEeeCCCeEEEEEccCCcccce---------------------eeee-------------------------
Q psy13207 116 --YYGLRMATCSSDQNIKVTRDVMGTRFDI---------------------ETIG------------------------- 147 (197)
Q Consensus 116 --~~~~~~~s~~~d~~i~~~d~~~~~~~~~---------------------~~~~------------------------- 147 (197)
++.+ ++++.|+.|++||++....... ..+.
T Consensus 158 ~~~~~~--~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~ 235 (342)
T d1yfqa_ 158 TNSSRL--IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp ECSSEE--EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred ccCCce--eeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccc
Confidence 4455 8888888888888754211000 0000
Q ss_pred ----------eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 148 ----------NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 148 ----------~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
...+|...|++++|+|++++|++|+.||.|++||+++++.+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~ 290 (342)
T d1yfqa_ 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred ceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEec
Confidence 001344568899999999999999999999999999887766554
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=3.4e-21 Score=139.30 Aligned_cols=161 Identities=15% Similarity=0.229 Sum_probs=121.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...+.++.+ + +..|++++.||.|++||++..+.+..+. .+...+.++
T Consensus 153 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~l~s~~~dg~i~~~d~~~~~~~~~~~-----~~~~~v~~~ 223 (342)
T d2ovrb2 153 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D--GIHVVSGSLDTSIRVWDVETGNCIHTLT-----GHQSLTSGM 223 (342)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--C--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCCSCEEEE
T ss_pred ecCCCeEEEeecccceeeEEEcCcccccccccC--C--CCEEEEEeCCCeEEEeecccceeeeEec-----ccccceeEE
Confidence 3456778888654 457788877777665 4 6689999999999999998876543222 124556666
Q ss_pred EEccCCCcccce-----eEEEE------eeEec--ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSIN--AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
.+++ ++++++ +++|+ ...+. ..|...+.++.++++.+ ++|+.||.|++||+++ ++.+.
T Consensus 224 ~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~s~Dg~i~iwd~~t-----g~~i~ 294 (342)
T d2ovrb2 224 ELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSDDGTVKLWDLKT-----GEFIR 294 (342)
T ss_dssp EEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEE--EEEETTSEEEEEETTT-----CCEEE
T ss_pred ecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCee--EEEcCCCEEEEEECCC-----CCEEE
Confidence 6654 566654 89999 22332 14667888888989888 9999999999999987 44444
Q ss_pred ee-----cCceecEEEEEEccCCCEEEEEeCCCc----EEEEEcCC
Q psy13207 148 NF-----EDHYCTVWRVSWNITGTIVASSGDDGC----VRLWKLKK 184 (197)
Q Consensus 148 ~~-----~~h~~~v~~~~~~p~~~~l~~~~~dg~----i~iw~~~~ 184 (197)
.+ .+|...|++++|+|++.++++|+.||+ |++||++.
T Consensus 295 ~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 295 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 43 357788999999999999999999986 99999874
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=6.2e-21 Score=137.88 Aligned_cols=156 Identities=14% Similarity=0.145 Sum_probs=116.4
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
+....|++|.+.|.+ +++++ |++|+||+.||+|+|||+.+++.+..+. .+...|.+++|+|+ +++++
T Consensus 7 ~~~~~l~GH~~~V~s-~~~~~--g~~l~sgs~Dg~i~vWd~~~~~~~~~~~-----~h~~~V~~v~~~~~--~l~s~s~D 76 (342)
T d2ovrb2 7 KSPKVLKGHDDHVIT-CLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMRDN--IIISGSTD 76 (342)
T ss_dssp CCCEEEECSTTSCEE-EEEEE--TTEEEEEETTSCEEEEETTTCCEEEECC-----CCSSCEEEEEEETT--EEEEEETT
T ss_pred CcCEEECCcCCceEE-EEEEC--CCEEEEEeCCCeEEEEECCCCCEEEEEe-----CCCCCEEEEEeCCC--ccccceec
Confidence 344578999999865 36667 8899999999999999999876544332 12567888888764 33222
Q ss_pred --e-----------------------------------------------------------------------------
Q psy13207 93 --S----------------------------------------------------------------------------- 93 (197)
Q Consensus 93 --~----------------------------------------------------------------------------- 93 (197)
+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 156 (342)
T d2ovrb2 77 RTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 156 (342)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred ccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCC
Confidence 1
Q ss_pred ---EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 94 ---IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 94 ---~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
++|+ +..+. +|...+..+.+++..+ ++++.|+.|++||++. .+.+..+.+|...+.+++++
T Consensus 157 ~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~l--~s~~~dg~i~~~d~~~-----~~~~~~~~~~~~~v~~~~~~-- 226 (342)
T d2ovrb2 157 FMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHV--VSGSLDTSIRVWDVET-----GNCIHTLTGHQSLTSGMELK-- 226 (342)
T ss_dssp SCEEEEEGGGTEEEEEEC-CCSSCEEEEEECSSEE--EEEETTSCEEEEETTT-----CCEEEEECCCCSCEEEEEEE--
T ss_pred CeEEEeecccceeeEEEc-CcccccccccCCCCEE--EEEeCCCeEEEeeccc-----ceeeeEecccccceeEEecC--
Confidence 2333 33344 5666666666667777 9999999999999976 67788888999999888775
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 165 GTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+++|++++.||.|++||+...+....+
T Consensus 227 ~~~l~s~s~d~~i~iwd~~~~~~~~~~ 253 (342)
T d2ovrb2 227 DNILVSGNADSTVKIWDIKTGQCLQTL 253 (342)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEecccccccccc
Confidence 569999999999999999887654443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.87 E-value=4.8e-21 Score=136.59 Aligned_cols=161 Identities=9% Similarity=0.067 Sum_probs=109.1
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc----------------------eecc--cee
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ----------------------WCLQ--HEV 71 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~----------------------~~~~--~~~ 71 (197)
++..+|.+|.++|++++|+| |+||+.||+|++||+.+...... ..+. ...
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~------l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~ 77 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP------LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKH 77 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT------TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEE
T ss_pred ceeEEECCCCCceEEEEECc------EEEEeCCCeEEEEECCCCCCCCCCCEEEEEecCCCeEEEEeecccccccccccc
Confidence 45678999999999999976 79999999999999875432110 0000 000
Q ss_pred ccCCCeeeEEEccCCCcccce--------------------------------------------eEEEE------eeEe
Q psy13207 72 ACPTLASCLTWNHSFSRFNSI--------------------------------------------SIMYE------AHSI 101 (197)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~------~~~~ 101 (197)
.....+.++.+++++..++.+ +++|+ ...+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~ 157 (287)
T d1pgua2 78 EFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL 157 (287)
T ss_dssp ECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEEC
T ss_pred ccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeee
Confidence 001223333444433322111 25665 2222
Q ss_pred cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC----------CCEEEEE
Q psy13207 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT----------GTIVASS 171 (197)
Q Consensus 102 ~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~----------~~~l~~~ 171 (197)
...|...+.+++|+++.-+|++|+.||.|++||..+. ......+.+|..+|.+++|+|+ +.+|++|
T Consensus 158 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sg 233 (287)
T d1pgua2 158 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR----EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233 (287)
T ss_dssp SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEE
T ss_pred eeccCCceeEEEeccCccccccccccccccceeeccc----ccccccccccccccceeeecccccccccccCCCCeeEee
Confidence 2246788999999955545599999999999999762 2233456789999999999875 4689999
Q ss_pred eCCCcEEEEEcCCCc
Q psy13207 172 GDDGCVRLWKLKKKR 186 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~ 186 (197)
+.|++|++||+++..
T Consensus 234 s~D~~i~iw~~~~~~ 248 (287)
T d1pgua2 234 SLDTNIFIYSVKRPM 248 (287)
T ss_dssp ETTSCEEEEESSCTT
T ss_pred cCCCeEEEEECCCCC
Confidence 999999999997744
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=4.9e-20 Score=133.72 Aligned_cols=174 Identities=11% Similarity=0.115 Sum_probs=131.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|+.. .++.+|.++|++++|+|+ + +|++|+.|++|++|+....+........ .........
T Consensus 29 gs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~--~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~---~~~~~~~~~ 102 (355)
T d1nexb2 29 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG--G-ILVSGSTDRTVRVWDIKKGCCTHVFEGH---NSTVRCLDI 102 (355)
T ss_dssp EETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT--T-EEEEEETTCCEEEEETTTTEEEEEECCC---SSCEEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC--C-EEEEEecccccccccccccccccccccc---ccccccccc
Confidence 4678999999853 568899999999999985 4 7999999999999999876543221111 112334556
Q ss_pred EEccCCCcccce-----eEEEEee-----------------------------EecccCCCceeEEEEcCCCeEEEEeeC
Q psy13207 81 TWNHSFSRFNSI-----SIMYEAH-----------------------------SINAEHKDLIHDVAYDYYGLRMATCSS 126 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~~~-----------------------------~~~~~~~~~i~~~~~~~~~~~~~s~~~ 126 (197)
.+.+++..++.+ +++|++. ... .|...+.....+++.+ +++..
T Consensus 103 ~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~--~~~~~ 179 (355)
T d1nexb2 103 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR-GHMASVRTVSGHGNIV--VSGSY 179 (355)
T ss_dssp EEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEE-CCSSCEEEEEEETTEE--EEEET
T ss_pred ccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeee-ecccccccccccccee--eeecc
Confidence 677887777654 7888811 111 2334444444457777 99999
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
|+.|++||+++ .+.+....++...+.++.|+|++.++++++.|+.|++||++++.....+..
T Consensus 180 d~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 241 (355)
T d1nexb2 180 DNTLIVWDVAQ-----MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241 (355)
T ss_dssp TSCEEEEETTT-----TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred cceeeeeeccc-----ccceeeeeccccccccccccccceeeecccccceEEeeecccccccccccc
Confidence 99999999976 566777788888999999999999999999999999999998776655543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2.9e-19 Score=126.34 Aligned_cols=168 Identities=17% Similarity=0.216 Sum_probs=97.4
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec--------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-------- 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-------- 72 (197)
+..|+++++|++. .++.+|.++|.+++|+ +++|++|+.|+.|++|++..+.............
T Consensus 31 gs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~----~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (293)
T d1p22a2 31 GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD----ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 106 (293)
T ss_dssp EESSSCEEEEESSSCCEEEEECCCSSCEEEEECC----SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT
T ss_pred EeCCCeEEEEECCCCcEEEEEecCCCCEeeeecc----cceeeccccccccccccccccccccccccccccccccccccc
Confidence 5778999999864 4688999999999874 5689999999999999998764322111100000
Q ss_pred ------------------------------cCCCeeeEEEccCCCccc---ceeEEEE------eeEecccCCCceeEEE
Q psy13207 73 ------------------------------CPTLASCLTWNHSFSRFN---SISIMYE------AHSINAEHKDLIHDVA 113 (197)
Q Consensus 73 ------------------------------~~~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~i~~~~ 113 (197)
+...+.++.+.+...... ..+++|+ +..+. ++...+..+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~ 185 (293)
T d1p22a2 107 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQ 185 (293)
T ss_dssp EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEE
T ss_pred ceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeeecCCCCcEEEEEc-cccccccccc
Confidence 001111111111110000 0135555 34444 5555666666
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+++..+ ++++.|+.|++||+++ ...+..+.+|...+.. +++++.+|++++.||.|++||+.....
T Consensus 186 ~~~~~l--~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~ 250 (293)
T d1p22a2 186 YRDRLV--VSGSSDNTIRLWDIEC-----GACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALD 250 (293)
T ss_dssp EETTEE--EEEETTSCEEEEETTT-----CCEEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTS
T ss_pred CCCCeE--EEecCCCEEEEEeccc-----ceeeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCcc
Confidence 556655 6666666666666654 6666666666665543 344566666666666666666654433
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=1.8e-19 Score=134.15 Aligned_cols=131 Identities=13% Similarity=0.179 Sum_probs=92.4
Q ss_pred cccccccceeeee-----------eeecCCCcceeEEEECCCCCCcEEEEEeCCCc---EEEEEcCCcccccceecccee
Q psy13207 6 LQSEKCLNQWTRR-----------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGL---VRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~---v~iw~~~~~~~~~~~~~~~~~ 71 (197)
+..|+++++|++. ..+.+|..+|++++|+|+ |++|++|+.|++ |++||+.+++.+..+......
T Consensus 201 gs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spd--g~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~ 278 (393)
T d1sq9a_ 201 GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ--GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 278 (393)
T ss_dssp ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS--TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EeCCCcEEEEeecccccccccccccccccccceEEEcccccc--cceeeeecCCCCcceeeecccccceeeeeecccccc
Confidence 4678999999753 235689999999999999 999999999975 899999987654433211100
Q ss_pred ccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 72 ACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
... ...+. +|...|++++|+|+.-+|+||+.|++|++||+++ ++++..+.+
T Consensus 279 --~~~---------------------~~~~~-gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~-----g~~~~~l~g 329 (393)
T d1sq9a_ 279 --SQA---------------------SLGEF-AHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT-----KERITTLNM 329 (393)
T ss_dssp ----------------------------CCB-SBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----TEEEEEEEC
T ss_pred --ccc---------------------eeeee-cccCceeeeccCCCCCeeEEECCCCEEEEEECCC-----CCEEEEECC
Confidence 000 11223 8999999999995544449999999999999987 678888888
Q ss_pred ceecEE----EEEEccCCCE
Q psy13207 152 HYCTVW----RVSWNITGTI 167 (197)
Q Consensus 152 h~~~v~----~~~~~p~~~~ 167 (197)
|...|. .++|+|++..
T Consensus 330 H~~~v~~~~~~~~~~~~~~~ 349 (393)
T d1sq9a_ 330 HCDDIEIEEDILAVDEHGDS 349 (393)
T ss_dssp CGGGCSSGGGCCCBCTTSCB
T ss_pred cCCcccCCccEEEECCCCCE
Confidence 865543 2444444443
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=3.1e-19 Score=129.41 Aligned_cols=123 Identities=20% Similarity=0.205 Sum_probs=94.3
Q ss_pred eeeecCCCcce-eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEE
Q psy13207 18 RSNLVDSRTSV-TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMY 96 (197)
Q Consensus 18 ~~~~~~h~~~v-~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (197)
+.+|+||.+.| +|++| + +++|+||+.||+|+|||+.+++.+
T Consensus 5 ~~tL~GH~~~vitc~~~--~--~~~l~tgs~Dg~i~vWd~~~~~~~---------------------------------- 46 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--E--DNYVITGADDKMIRVYDSINKKFL---------------------------------- 46 (355)
T ss_dssp EEEEECCSSSCEEEEEE--E--TTEEEEEETTTEEEEEETTTTEEE----------------------------------
T ss_pred cEEECCcCCCcEEEEEE--C--CCEEEEEeCCCeEEEEECCCCcEE----------------------------------
Confidence 45799998875 66655 5 679999999999999999876533
Q ss_pred EeeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeee--ecCceecEEEEEEccCCCEEEEEeC
Q psy13207 97 EAHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN--FEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 97 ~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
..+. +|...|.+++|+ ++.+ ++|+.|+.|++|+... ...... ...+........++++++++++++.
T Consensus 47 --~~l~-~H~~~V~~l~~s~~~~l--~s~s~D~~i~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (355)
T d1nexb2 47 --LQLS-GHDGGVWALKYAHGGIL--VSGSTDRTVRVWDIKK-----GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR 116 (355)
T ss_dssp --EEEE-CCSSCEEEEEEETTTEE--EEEETTCCEEEEETTT-----TEEEEEECCCSSCEEEEEEEEETTEEEEEEEET
T ss_pred --EEEE-CCCCCEEEEEEcCCCEE--EEEecccccccccccc-----cccccccccccccccccccccccccceeeeecC
Confidence 2333 899999999999 5555 9999999999999976 333322 2334455667788899999999999
Q ss_pred CCcEEEEEcCCCcch
Q psy13207 174 DGCVRLWKLKKKRKK 188 (197)
Q Consensus 174 dg~i~iw~~~~~~~~ 188 (197)
|+.|++||+++....
T Consensus 117 d~~i~iw~~~~~~~~ 131 (355)
T d1nexb2 117 DNTLHVWKLPKESSV 131 (355)
T ss_dssp TSEEEEEECCC----
T ss_pred CCcEEEEEccCCcee
Confidence 999999999876543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=1.9e-19 Score=135.51 Aligned_cols=91 Identities=11% Similarity=-0.022 Sum_probs=63.7
Q ss_pred EecccCCCceeEEEEcCCCeEEE-------EeeCCCeEEEEEccCCcccceeee-----eeecCceecEEEEEEccCCCE
Q psy13207 100 SINAEHKDLIHDVAYDYYGLRMA-------TCSSDQNIKVTRDVMGTRFDIETI-----GNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~~~~~~-------s~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~h~~~v~~~~~~p~~~~ 167 (197)
.+. +|...+..++|+|+..+|+ ++..|++|++||+++.... .+.. ..+..|...|.+++|||||++
T Consensus 298 ~l~-g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~-~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~ 375 (426)
T d1hzua2 298 ELQ-GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK-YQVLPIAEWADLGEGAKRVVQPEYNKRGDE 375 (426)
T ss_dssp EEE-CSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSC-CEEECHHHHHCCCSSCCCEEEEEECSSSSE
T ss_pred EEe-cCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcC-eEEeccchhcccCCCCccEEEEEECCCCCE
Confidence 445 6778889999996665556 3556899999999773211 0111 112345667999999999997
Q ss_pred EEEE-----eCCCcEEEEEcCCCcchhhhh
Q psy13207 168 VASS-----GDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 168 l~~~-----~~dg~i~iw~~~~~~~~~~~~ 192 (197)
++.+ +.+|.|+|||.++.+.+..+.
T Consensus 376 i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~ 405 (426)
T d1hzua2 376 VWFSVWNGKNDSSALVVVDDKTLKLKAVVK 405 (426)
T ss_dssp EEEEECCCTTSCCEEEEEETTTTEEEEEEC
T ss_pred EEEEEecCCCCCCeEEEEECCCCeEEEEEC
Confidence 7543 358889999999988766543
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=2e-18 Score=124.20 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=56.3
Q ss_pred cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 104 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
.|...+++++|+|+.-+|++|+.||.|++||+++ .+.+..+..+ ..+..++|+|++++|++++.|+++++|..
T Consensus 249 ~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~-----~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~ 321 (342)
T d1yfqa_ 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT-----RKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT-----TEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred cccccceeEEecCCccEEEEECCCCEEEEEECCC-----CcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence 3455688999995444449999999999999987 5666666543 23456788899999999999998888865
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=4.6e-18 Score=120.02 Aligned_cols=146 Identities=18% Similarity=0.289 Sum_probs=109.0
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
.+..|...|.++.+.+. .+++++.|+.+++||+.+.+.+..+.. ....+..+.++ +..++++ ++
T Consensus 133 ~~~~~~~~v~~~~~~~~----~~~~~s~d~~i~~~d~~~~~~~~~~~~-----~~~~v~~~~~~--~~~l~~~~~dg~i~ 201 (293)
T d1p22a2 133 VLVGHRAAVNVVDFDDK----YIVSASGDRTIKVWNTSTCEFVRTLNG-----HKRGIACLQYR--DRLVVSGSSDNTIR 201 (293)
T ss_dssp EECCCSSCEEEEEEETT----EEEEEETTSEEEEEETTTCCEEEEEEC-----CSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred cccccccccccceeccc----ccccccCCCceeeecCCCCcEEEEEcc-----cccccccccCC--CCeEEEecCCCEEE
Confidence 35678888888887654 688999999999999988765433221 13455555554 4455543 79
Q ss_pred EEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc----ccceeeeeeecCceecEEEEEEccC
Q psy13207 95 MYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT----RFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 95 ~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~----~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+|+ +.... +|...+....+.+..+ ++++.||.|++||++... ......+..+.+|...|++++|+
T Consensus 202 i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d-- 276 (293)
T d1p22a2 202 LWDIECGACLRVLE-GHEELVRCIRFDNKRI--VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-- 276 (293)
T ss_dssp EEETTTCCEEEEEC-CCSSCEEEEECCSSEE--EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--
T ss_pred EEecccceeeeeec-ccceeeeeccccceEE--EEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--
Confidence 999 55555 7788887776667777 999999999999986421 11134667888999999999995
Q ss_pred CCEEEEEeCCCcEEEEE
Q psy13207 165 GTIVASSGDDGCVRLWK 181 (197)
Q Consensus 165 ~~~l~~~~~dg~i~iw~ 181 (197)
+++|+++|.||+|++||
T Consensus 277 ~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 277 EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp SSCEEECCSSSEEEEEC
T ss_pred CCEEEEEecCCEEEEeC
Confidence 67899999999999997
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.75 E-value=3.4e-17 Score=119.27 Aligned_cols=163 Identities=9% Similarity=-0.138 Sum_probs=121.2
Q ss_pred cccccceeeeee---eecCCCcceeEEEECCCCCCcEEEEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 8 SEKCLNQWTRRS---NLVDSRTSVTDVKFGPKQLGLVLATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 8 ~~~~~~~w~~~~---~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..+.+.+|+... ...+|...|.+++|+|+ |++|++++.+. .|++||+.+++... ...+...+.+++|
T Consensus 22 ~~g~v~v~d~~~~~~~~~~~~~~v~~~~~spD--g~~l~~~~~~~g~~v~v~d~~~~~~~~------~~~~~~~v~~~~~ 93 (360)
T d1k32a3 22 SRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEK------FEENLGNVFAMGV 93 (360)
T ss_dssp ETTEEEEECTTSSBEEECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEE------CCCCCCSEEEEEE
T ss_pred ECCeEEEEECCCCcEEEccCCCCEEEEEECCC--CCEEEEEEcCCCCEEEEEECCCCcEEE------eeCCCceEEeeee
Confidence 345667776532 12379999999999999 99888776553 79999998765321 2233678999999
Q ss_pred ccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEE----------eeCCCeEEEEEccCCccc
Q psy13207 83 NHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMAT----------CSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 83 ~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s----------~~~d~~i~~~d~~~~~~~ 141 (197)
+|++++++.+ +++|+ ...+. .|...+.+++|+++.-+|+. +..++.+++||..+
T Consensus 94 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~---- 168 (360)
T d1k32a3 94 DRNGKFAVVANDRFEIMTVDLETGKPTVIER-SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG---- 168 (360)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT----
T ss_pred cccccccceeccccccccccccccceeeeee-cccccccchhhccceeeeeeeccccccceeeccccceeeecccc----
Confidence 9999998765 78888 34445 78888999999944333353 33456789999975
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.+ ...+..+...+..++|+|+|++|++++.|+.+.+|+....
T Consensus 169 -~~-~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~ 210 (360)
T d1k32a3 169 -RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 210 (360)
T ss_dssp -TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred -Cc-eeeecccccccccccccCCCCEEEEEeCCCceEccccccc
Confidence 22 3344456677889999999999999999999999987553
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.73 E-value=3.1e-17 Score=119.50 Aligned_cols=143 Identities=11% Similarity=0.055 Sum_probs=114.7
Q ss_pred eEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE---
Q psy13207 29 TDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE--- 97 (197)
Q Consensus 29 ~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--- 97 (197)
..-.||| + |+++|+++ +|.|++||+..+...+ +.+...+.+++|+|+++.|+.+ +++|+
T Consensus 6 ~~~~fSP~d--G~~~a~~~-~g~v~v~d~~~~~~~~-------~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~ 75 (360)
T d1k32a3 6 FAEDFSPLD--GDLIAFVS-RGQAFIQDVSGTYVLK-------VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT 75 (360)
T ss_dssp GEEEEEECG--GGCEEEEE-TTEEEEECTTSSBEEE-------CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT
T ss_pred hcccccCCC--CCEEEEEE-CCeEEEEECCCCcEEE-------ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC
Confidence 4567999 7 99999886 5799999998765332 2346789999999999988643 68999
Q ss_pred --eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe---
Q psy13207 98 --AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG--- 172 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~--- 172 (197)
+..+. .|...+.+++|+|+.-+|++++.++.+++|+..+ ......+..|...+.+++|+|+|++|+.++
T Consensus 76 ~~~~~~~-~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~ 149 (360)
T d1k32a3 76 GKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-----GKPTVIERSREAMITDFTISDNSRFIAYGFPLK 149 (360)
T ss_dssp CCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEEEECSSSCCCCEEECTTSCEEEEEEEEC
T ss_pred CcEEEee-CCCceEEeeeecccccccceeccccccccccccc-----cceeeeeecccccccchhhccceeeeeeecccc
Confidence 56666 8999999999995554459999999999999976 566667777888899999999999998654
Q ss_pred -------CCCcEEEEEcCCCcc
Q psy13207 173 -------DDGCVRLWKLKKKRK 187 (197)
Q Consensus 173 -------~dg~i~iw~~~~~~~ 187 (197)
.++.+++|++.+++.
T Consensus 150 ~~~~~~~~~~~~~v~d~~~~~~ 171 (360)
T d1k32a3 150 HGETDGYVMQAIHVYDMEGRKI 171 (360)
T ss_dssp SSTTCSCCEEEEEEEETTTTEE
T ss_pred ccceeeccccceeeeccccCce
Confidence 345689999987654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.72 E-value=8.2e-17 Score=116.10 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=56.2
Q ss_pred eeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 109 IHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 109 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+..+.++++.. ...+.++.+++||+.+ .+.+..+. +...+.+++|+|||++|++++.|++|++||..+.+.+
T Consensus 243 ~~~~~~~~~~~--~~~~~~~~i~v~d~~~-----~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v 314 (337)
T d1pbyb_ 243 YFSTAVNPAKT--RAFGAYNVLESFDLEK-----NASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEEEEECTTSS--EEEEEESEEEEEETTT-----TEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred eEEEEecccce--EEEEccccEEEEECCC-----CcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 34444554444 2234468899999987 45555543 4556789999999999999999999999999998877
Q ss_pred hhhh
Q psy13207 189 KKEE 192 (197)
Q Consensus 189 ~~~~ 192 (197)
..++
T Consensus 315 ~~i~ 318 (337)
T d1pbyb_ 315 GQVD 318 (337)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.66 E-value=2.2e-15 Score=108.87 Aligned_cols=61 Identities=11% Similarity=0.012 Sum_probs=48.2
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.++.|.+||..+ .+.+..+. +...+.+++|+|||++|++++.|+.|++||+++.+.+..++
T Consensus 270 ~~~~v~v~d~~~-----~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~ 330 (346)
T d1jmxb_ 270 VLNRLAKYDLKQ-----RKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330 (346)
T ss_dssp EESEEEEEETTT-----TEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred cCCeEEEEECCC-----CcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEE
Confidence 346789999876 45555443 34468899999999999999999999999999988776554
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.63 E-value=1.6e-14 Score=102.50 Aligned_cols=175 Identities=7% Similarity=-0.064 Sum_probs=107.5
Q ss_pred ccccccceeeeee-----eecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccc-----------
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQH----------- 69 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~----------- 69 (197)
..++++.+|++.. ++.. ...+..++|+|+ |++| ++++.++.|++||+.+.+.+..+....
T Consensus 9 ~~~~~v~v~D~~t~~~~~~i~~-g~~p~~va~spd--G~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~ 85 (301)
T d1l0qa2 9 SESDNISVIDVTSNKVTATIPV-GSNPMGAVISPD--GTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 85 (301)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTT--SSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred CCCCEEEEEECCCCeEEEEEEC-CCCceEEEEeCC--CCEEEEEECCCCEEEEEECCCCceeeeeecccccccccccccc
Confidence 4567888898542 3332 345789999999 8876 577789999999998876543322110
Q ss_pred -------------------------eeccCCCeeeEEEccCCCcccce------eEEEE---------------------
Q psy13207 70 -------------------------EVACPTLASCLTWNHSFSRFNSI------SIMYE--------------------- 97 (197)
Q Consensus 70 -------------------------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--------------------- 97 (197)
.+.......++.|+|++..+... +.+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (301)
T d1l0qa2 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAV 165 (301)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEE
T ss_pred ccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEe
Confidence 00112233455666666554221 23333
Q ss_pred --------------------------eeEecccCCCceeEEEEc--CCCeEEEE-eeCCCeEEEEEccCCcccceeeeee
Q psy13207 98 --------------------------AHSINAEHKDLIHDVAYD--YYGLRMAT-CSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 98 --------------------------~~~~~~~~~~~i~~~~~~--~~~~~~~s-~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+.... .....+..++++ ++.++++. ...++.|.+||..+ .+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t-----~~~~~~ 239 (301)
T d1l0qa2 166 TPDGTKVYVANFDSMSISVIDTVTNSVIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT-----NKITAR 239 (301)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT-----TEEEEE
T ss_pred eccccceeeecccccccccccccceeeeecc-cccCCcceeeccccccccccccccceeeeeeeeecCC-----CeEEEE
Confidence 00001 122344566776 44442222 23457899999976 455555
Q ss_pred ecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+.. ...+.+++|+|||++| ++++.|++|++||+++++...++
T Consensus 240 ~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~ 282 (301)
T d1l0qa2 240 IPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282 (301)
T ss_dssp EEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcC-CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 543 3457899999999977 57778999999999998766554
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.63 E-value=6.3e-15 Score=110.86 Aligned_cols=175 Identities=5% Similarity=-0.077 Sum_probs=115.5
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++++.+|+.. .++..+ ..+..++|+|+ |+++++++.|+++++||+.+.+......+.....+...+.+..
T Consensus 39 ~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpD--G~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~ 115 (432)
T d1qksa2 39 RDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKM 115 (432)
T ss_dssp TTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCS
T ss_pred cCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCC--CCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecc
Confidence 346788888754 356655 46999999999 9999999999999999998775432221111111123445567
Q ss_pred EccCCCcccc-e-----eEEEE------eeEec----------ccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCC
Q psy13207 82 WNHSFSRFNS-I-----SIMYE------AHSIN----------AEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 82 ~~~~~~~~~~-~-----~~~~~------~~~~~----------~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~ 138 (197)
|+|||++++. + +.+|| +..+. ..+......+.+++ ...++++...++.|.+||..+.
T Consensus 116 ~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~ 195 (432)
T d1qksa2 116 EGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL 195 (432)
T ss_dssp TTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS
T ss_pred cCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCC
Confidence 7889998643 2 79999 22222 01334556777873 2233377778899999998652
Q ss_pred cccceeeeeeecCceecEEEEEEccCCCEEEEEeC-CCcEEEEEcCCCcch
Q psy13207 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD-DGCVRLWKLKKKRKK 188 (197)
Q Consensus 139 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~~~~~~ 188 (197)
. ...+..+ .+...+.+++|+|+|+++++++. ++.+.++|..+.+..
T Consensus 196 ~---~~~~~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~ 242 (432)
T d1qksa2 196 N---NLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 242 (432)
T ss_dssp S---EEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred C---cceEEEE-cccCccccceECCCCCEEEEeccccceEEEeecccceEE
Confidence 1 1122222 23456789999999998877774 567888898776544
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.46 E-value=1.7e-13 Score=102.57 Aligned_cols=113 Identities=8% Similarity=-0.072 Sum_probs=81.4
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (197)
+.++++.+.||+|++||+.+++.+..+ + .| ..+..++|+|+.
T Consensus 32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l------------------------------------~-~g-~~~~~vafSPDG 73 (426)
T d1hzua2 32 NLFSVTLRDAGQIALVDGDSKKIVKVI------------------------------------D-TG-YAVHISRMSASG 73 (426)
T ss_dssp GEEEEEETTTTEEEEEETTTCSEEEEE------------------------------------E-CC-SSEEEEEECTTS
T ss_pred eEEEEEEcCCCEEEEEECCCCcEEEEE------------------------------------e-CC-CCeeEEEECCCC
Confidence 446688899999999999987654322 2 22 346677777444
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCcchh
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS-GDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~~~~~ 189 (197)
-++++++.|+.|++||+.+.+......+....+|...+.+++|+|||++++++ ..++.+.+||........
T Consensus 74 k~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~ 145 (426)
T d1hzua2 74 RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ 145 (426)
T ss_dssp CEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeE
Confidence 44488999999999999874322222334445677888899999999987555 588999999998866543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.43 E-value=4.2e-13 Score=100.80 Aligned_cols=114 Identities=10% Similarity=-0.074 Sum_probs=82.3
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (197)
.-++++.+.||+|.|||..+.+.+..+. .+ ..+..++|+|+.
T Consensus 32 ~~~~v~~~d~g~v~v~D~~t~~v~~~~~-------------------------------------~g-~~~~~v~fSpDG 73 (432)
T d1qksa2 32 NLFSVTLRDAGQIALIDGSTYEIKTVLD-------------------------------------TG-YAVHISRLSASG 73 (432)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEE-------------------------------------CS-SCEEEEEECTTS
T ss_pred cEEEEEEcCCCEEEEEECCCCcEEEEEe-------------------------------------CC-CCeeEEEECCCC
Confidence 4456899999999999999876543322 22 246677777443
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcchhh
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
-++++++.|+.+++||+.+.+......+....+|...+.+..|+|||++| ++++.+++|.+||..+++....
T Consensus 74 ~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~ 146 (432)
T d1qksa2 74 RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI 146 (432)
T ss_dssp CEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred CEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceee
Confidence 34488999999999999874322223344445677778888999999986 6788899999999988765443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.35 E-value=1.2e-10 Score=83.32 Aligned_cols=174 Identities=11% Similarity=0.034 Sum_probs=112.4
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEE-EEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLA-TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
...++++++|++.. ....|.+.+..++|+|+ |++|+ ++..|+.|++|++........ ..........+
T Consensus 10 ~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spD--G~~L~v~~~~d~~i~~~~i~~~~~~~~--~~~~~~~~~~p 85 (333)
T d1ri6a_ 10 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGALT--FAAESALPGSL 85 (333)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEE--EEEEEECSSCC
T ss_pred CCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCC--CCEEEEEECCCCeEEEEEEeCCCCcEE--EeeecccCCCc
Confidence 45778999998742 12368889999999999 98875 555689999999976543321 12222234567
Q ss_pred eeEEEccCCCcccce------eEEEE--------eeEecccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccc
Q psy13207 78 SCLTWNHSFSRFNSI------SIMYE--------AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~------~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~ 142 (197)
..++|+|++++++.+ +.+|+ ..... .+...+.++.++++.-.++.++ .+..+.+|+........
T Consensus 86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (333)
T d1ri6a_ 86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 164 (333)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred eEEEEcCCCCEEeecccCCCceeeeccccccceeccccc-CCCccceEEEeeecceeeeccccccceeeEEEeccCCcce
Confidence 789999999987654 45665 22223 4667788889983333225554 56789999986532111
Q ss_pred eeee-eeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy13207 143 IETI-GNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 143 ~~~~-~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~ 184 (197)
.... ............++|++++.+++... ..+...+|+...
T Consensus 165 ~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 208 (333)
T d1ri6a_ 165 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 208 (333)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred eeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecc
Confidence 1111 11122334567899999998887665 556778887654
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.31 E-value=1e-10 Score=82.38 Aligned_cols=136 Identities=7% Similarity=-0.034 Sum_probs=98.1
Q ss_pred EEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEE------eeEecccCCCc
Q psy13207 41 VLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE------AHSINAEHKDL 108 (197)
Q Consensus 41 ~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~ 108 (197)
.+++.+.|++|.+||+.+++.+.++. ....+..++|+|+|++++.+ +.+|| +..+. .+ ..
T Consensus 4 ~yV~~~~~~~v~v~D~~t~~~~~~i~------~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~-~~-~~ 75 (301)
T d1l0qa2 4 AYIANSESDNISVIDVTSNKVTATIP------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-AG-SS 75 (301)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-CS-SS
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEE------CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeee-cc-cc
Confidence 35677899999999999886554443 34567899999999987432 89999 44555 43 35
Q ss_pred eeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE-EeCCCcEEEEEcCCCc
Q psy13207 109 IHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS-SGDDGCVRLWKLKKKR 186 (197)
Q Consensus 109 i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~-~~~dg~i~iw~~~~~~ 186 (197)
+..++|+ ....+++++..++.+.+|+..+ .+....+.. .....+++|+|+++.++. +..++.+.+|+..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~ 149 (301)
T d1l0qa2 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTS-----NTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA 149 (301)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTT-----TEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccccccccccccccccccccceeeeccccc-----ceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccc
Confidence 6888998 3333346677888999999976 455555544 345688999999987754 5568889999998876
Q ss_pred chhh
Q psy13207 187 KKKK 190 (197)
Q Consensus 187 ~~~~ 190 (197)
....
T Consensus 150 ~~~~ 153 (301)
T d1l0qa2 150 VINT 153 (301)
T ss_dssp EEEE
T ss_pred eeee
Confidence 5544
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.28 E-value=2.2e-11 Score=87.04 Aligned_cols=137 Identities=7% Similarity=0.009 Sum_probs=93.4
Q ss_pred cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc-ce-----eEEEE------eeEecccC--
Q psy13207 40 LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN-SI-----SIMYE------AHSINAEH-- 105 (197)
Q Consensus 40 ~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~------~~~~~~~~-- 105 (197)
+++++++.|++|++||+.+.+.+..+.... ....+.+++|+|+|++++ ++ +.+|| +..+. .+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~---~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~-~~~~ 77 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIAD---AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID-LSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTT---CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE-CCBT
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCC---CCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEe-cCCC
Confidence 589999999999999999887654433211 134578899999999863 32 89999 23333 22
Q ss_pred ---CCceeEEEEcCCCeEEEEee------------CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 106 ---KDLIHDVAYDYYGLRMATCS------------SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 106 ---~~~i~~~~~~~~~~~~~s~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+..++|+++.-.+++++ .+..+.+||..+ ......+.. ...+..++|+|+|+++++
T Consensus 78 ~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l~~ 151 (337)
T d1pbyb_ 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-----LSRRKAFEA-PRQITMLAWARDGSKLYG 151 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-----TEEEEEEEC-CSSCCCEEECTTSSCEEE
T ss_pred cccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccC-----CeEEEeccc-cCCceEEEEcCCCCEEEE
Confidence 23455778884332225544 457788888876 455555543 345778999999999998
Q ss_pred EeCCCcEEEEEcCCCcch
Q psy13207 171 SGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 171 ~~~dg~i~iw~~~~~~~~ 188 (197)
++. .+.+||..+.+..
T Consensus 152 ~~~--~~~~~d~~~~~~~ 167 (337)
T d1pbyb_ 152 LGR--DLHVMDPEAGTLV 167 (337)
T ss_dssp ESS--SEEEEETTTTEEE
T ss_pred EcC--CcceeeeecCcEE
Confidence 864 4778998876543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.27 E-value=7.2e-11 Score=85.33 Aligned_cols=40 Identities=8% Similarity=0.059 Sum_probs=32.4
Q ss_pred ecEEEEEEccCCC--EEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 154 CTVWRVSWNITGT--IVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 154 ~~v~~~~~~p~~~--~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
..+.+++|+|||+ ++++++.|++|++||.++++.+..+..
T Consensus 300 ~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~ 341 (355)
T d2bbkh_ 300 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341 (355)
T ss_dssp EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred CCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeC
Confidence 4567899999997 456677899999999999887776643
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.25 E-value=3.4e-10 Score=82.36 Aligned_cols=161 Identities=12% Similarity=-0.001 Sum_probs=97.0
Q ss_pred CCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce----eEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI----SIMY 96 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~ 96 (197)
.+.....++.++|+ ++ .+++.+.|+.+.+|+.................. ......+.+.+++..+... +.+|
T Consensus 162 ~~~~~~~~~~~s~~--g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 239 (373)
T d2madh_ 162 QLLSSPTCYHIHPG--APSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQA 239 (373)
T ss_pred EEeccceeEEEecC--CCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEE
Confidence 34456678899998 64 567889999999999887654433221111111 1122334444544443222 3333
Q ss_pred E--------eeEecccCC----------CceeEEEEc------------CCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 97 E--------AHSINAEHK----------DLIHDVAYD------------YYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 97 ~--------~~~~~~~~~----------~~i~~~~~~------------~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+ +.... .+. .....++++ +..+ ++...++.+.+||..+ .+.+
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~v~~~d~~t-----~~~~ 311 (373)
T d2madh_ 240 DISAAGATNKAPID-ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAW--KLHAAAKEVTSVTGLV-----GQTS 311 (373)
T ss_pred EcCCCeEEEEEeec-cccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceE--EeecCCCeEEEEECCC-----CcEE
Confidence 3 01111 111 111122222 2233 5667778899999976 4555
Q ss_pred eeecCceecEEEEEEccCCCE--EEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTI--VASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~--l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
..+. +...+..++|+|||+. +++++.|++|++||+.+++....+...
T Consensus 312 ~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~ 360 (373)
T d2madh_ 312 SQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVEL 360 (373)
T ss_pred EEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCC
Confidence 5543 4567899999999984 467889999999999999887776543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=2e-10 Score=82.05 Aligned_cols=141 Identities=11% Similarity=0.070 Sum_probs=96.2
Q ss_pred cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEe------eEec--ccC
Q psy13207 40 LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEA------HSIN--AEH 105 (197)
Q Consensus 40 ~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~------~~~~--~~~ 105 (197)
..+++++.|++|++|++.....+ .+...+.....+..++|+|+|++|+++ +.+|++ ..+. ..+
T Consensus 5 ~v~v~~~~~~~I~v~~~~~~~~l---~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~ 81 (333)
T d1ri6a_ 5 TVYIASPESQQIHVWNLNHEGAL---TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 81 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE---EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEcCCCCe---EEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeeccc
Confidence 35688889999999999865433 233444557789999999999998433 688881 1111 134
Q ss_pred CCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 106 KDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 106 ~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
...+..++|+++.-++++++ .++.+.+|+..... .........+...+.++.++|++++++.++ .+..+.+|+..
T Consensus 82 ~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~ 158 (333)
T d1ri6a_ 82 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL---PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 158 (333)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE---EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCCceEEEEcCCCCEEeecccCCCceeeecccccc---ceecccccCCCccceEEEeeecceeeeccccccceeeEEEec
Confidence 55677899994433336666 57789999876521 222333344566778899999999888877 45679999886
Q ss_pred CCc
Q psy13207 184 KKR 186 (197)
Q Consensus 184 ~~~ 186 (197)
...
T Consensus 159 ~~~ 161 (333)
T d1ri6a_ 159 DDG 161 (333)
T ss_dssp TTS
T ss_pred cCC
Confidence 643
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.20 E-value=9.6e-11 Score=83.98 Aligned_cols=116 Identities=4% Similarity=-0.126 Sum_probs=80.4
Q ss_pred EEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCcee
Q psy13207 31 VKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIH 110 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 110 (197)
++|+++ +++|++++.|++|.+||+.+.+.+..+.. .+...+.
T Consensus 2 ~a~~~~--~~~l~~~~~~~~v~v~D~~t~~~~~t~~~------------------------------------~~~~~p~ 43 (346)
T d1jmxb_ 2 PALKAG--HEYMIVTNYPNNLHVVDVASDTVYKSCVM------------------------------------PDKFGPG 43 (346)
T ss_dssp CCCCTT--CEEEEEEETTTEEEEEETTTTEEEEEEEC------------------------------------SSCCSSC
T ss_pred ccCCCC--CcEEEEEcCCCEEEEEECCCCCEEEEEEc------------------------------------CCCCCcc
Confidence 467888 99999999999999999998765433321 2333445
Q ss_pred EEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecC------ceecEEEEEEccCCCEEEEEe-----------
Q psy13207 111 DVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFED------HYCTVWRVSWNITGTIVASSG----------- 172 (197)
Q Consensus 111 ~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~l~~~~----------- 172 (197)
+++|+|+. .+++++..++.|.+||+.+ .+.+..+.. +...+..++|+|||+++++++
T Consensus 44 ~l~~spDG~~l~v~~~~~~~v~~~d~~t-----~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~ 118 (346)
T d1jmxb_ 44 TAMMAPDNRTAYVLNNHYGDIYGIDLDT-----CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118 (346)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTT-----TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred eEEECCCCCEEEEEECCCCcEEEEeCcc-----CeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeec
Confidence 56665332 2236777899999999987 344433321 223456899999999988775
Q ss_pred -CCCcEEEEEcCCCcchh
Q psy13207 173 -DDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 173 -~dg~i~iw~~~~~~~~~ 189 (197)
.++.+.+|+..++....
T Consensus 119 ~~~~~i~~~~~~~~~~~~ 136 (346)
T d1jmxb_ 119 VKPPRLEVFSTADGLEAK 136 (346)
T ss_dssp ECCCEEEEEEGGGGGGBC
T ss_pred cCcceEEEEecccceeee
Confidence 47788999887765443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.06 E-value=3.2e-09 Score=77.34 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=41.8
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC--EEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT--IVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.|.+||..+ .+.+..+. +...+.+++|+|||+ +++++..|+.|.+||..+++....++
T Consensus 295 ~v~v~D~~t-----~~~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~ 354 (368)
T d1mdah_ 295 NTSSVTASV-----GQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEEEEESSS-----CCEEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred eEEEEECCC-----CcEeEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEE
Confidence 366777765 34444443 345678899999997 34667789999999999988776654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.00 E-value=6.8e-09 Score=75.29 Aligned_cols=148 Identities=9% Similarity=-0.116 Sum_probs=93.4
Q ss_pred cCCCcceeEEEECCCCCCcEEEEE-----eCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATC-----AADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~-----~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..+..++..++++|+ |+.++.. +.++.|.+||..+++.+.++. . .....+.|+|+|++++.+
T Consensus 17 ~~~~~p~~~~a~spd--g~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~------~-~~~~~~a~SpDG~~l~va~~~~ 87 (373)
T d2madh_ 17 GAADGPTNDEAPGAD--GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN------G-GFLPNPVAAHSGSEFALASTSF 87 (373)
T ss_pred ccCCCCccccccCCC--CCEEEEEcccccCCCceEEEEECCCCCEEEEEe------C-CCCccEEEcCCCCEEEEEeecC
Confidence 357889999999999 8777654 244679999998887654332 1 122369999999998654
Q ss_pred -----------eEEEE------eeEecccCCCce-------eEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 93 -----------SIMYE------AHSINAEHKDLI-------HDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 93 -----------~~~~~------~~~~~~~~~~~i-------~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+.+|| +..+. .+.... ..+.|+ +..+++.....++.+.+|+... .+..
T Consensus 88 ~~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~-----~~~~ 161 (373)
T d2madh_ 88 SRIAKGKRTDYVEVFDPVTFLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGG-----SSDD 161 (373)
T ss_pred CcccccccceEEEEEECCCCcEEEEEe-cCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccC-----CeEE
Confidence 68888 22232 233222 234444 3333223333445566666543 2222
Q ss_pred eeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcch
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+.....++.++|+|+.+ ++.+.|+.+.+|+.......
T Consensus 162 ----~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~ 200 (373)
T d2madh_ 162 ----QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAG 200 (373)
T ss_pred ----EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceee
Confidence 223345788999998654 67889999999998776543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.89 E-value=1.1e-08 Score=76.77 Aligned_cols=141 Identities=10% Similarity=-0.027 Sum_probs=94.4
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce--------------
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI-------------- 92 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------- 92 (197)
-..+.|.++ ++++.. .|+.+.+||+.+++....+. ...+.. ...+.+..|+||+++++.+
T Consensus 19 ~~~~~W~~d--~~~~~~--~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~ 93 (470)
T d2bgra1 19 LYSLRWISD--HEYLYK--QENNILVFNAEYGNSSVFLE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (470)
T ss_dssp CCCCEECSS--SEEEEE--SSSCEEEEETTTCCEEEEEC-TTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccCCEeCCC--CEEEEE--cCCcEEEEECCCCCEEEEEc-hhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCce
Confidence 345789998 877653 57899999999887543222 222222 4578999999999987643
Q ss_pred eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec---------C-----
Q psy13207 93 SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE---------D----- 151 (197)
Q Consensus 93 ~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---------~----- 151 (197)
+.+|| +..+. .+...+..+.|+ ++.+ |. ..++.+.+|+..++ ....... +
T Consensus 94 ~~l~d~~~~~~~~l~-~~~~~~~~~~~SPDG~~i--a~-~~~~~l~~~~~~~g-----~~~~~t~~~~~~~~~~g~~d~~ 164 (470)
T d2bgra1 94 YDIYDLNKRQLITEE-RIPNNTQWVTWSPVGHKL--AY-VWNNDIYVKIEPNL-----PSYRITWTGKEDIIYNGITDWV 164 (470)
T ss_dssp EEEEETTTTEECCSS-CCCTTEEEEEECSSTTCE--EE-EETTEEEEESSTTS-----CCEECCSCCBTTTEEESBCCHH
T ss_pred EEEEECCCCcccccc-cCCccccccccccCccee--eE-eecccceEEECCCC-----ceeeeeeccCCCccccccccee
Confidence 35777 44455 678889999999 4555 65 46778999998763 2111111 1
Q ss_pred ----ceecEEEEEEccCCCEEEEEeCCCc-EEEEEc
Q psy13207 152 ----HYCTVWRVSWNITGTIVASSGDDGC-VRLWKL 182 (197)
Q Consensus 152 ----h~~~v~~~~~~p~~~~l~~~~~dg~-i~iw~~ 182 (197)
..+....+.|||||++|+....|.+ +..|.+
T Consensus 165 ~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 165 YEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp HHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred eeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence 1122355789999999999876644 555544
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.70 E-value=1.5e-07 Score=70.47 Aligned_cols=79 Identities=11% Similarity=0.024 Sum_probs=51.7
Q ss_pred cccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc---ceec----------
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ---HEVA---------- 72 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~---~~~~---------- 72 (197)
+.+.+|++. ..+..|...+..+.|+|+ |+.+|.. .++.+.+|+..+++..+..... ..+.
T Consensus 92 ~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPD--G~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~ 168 (470)
T d2bgra1 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPV--GHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (470)
T ss_dssp EEEEEEETTTTEECCSSCCCTTEEEEEECSS--TTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred ceEEEEECCCCcccccccCCccccccccccC--cceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeee
Confidence 344455543 246778899999999999 9999885 5679999998877543221100 0000
Q ss_pred cCCCeeeEEEccCCCcccc
Q psy13207 73 CPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~ 91 (197)
.......+.|+|+|+.++.
T Consensus 169 ~~~~~~~~~wSPDGk~ia~ 187 (470)
T d2bgra1 169 VFSAYSALWWSPNGTFLAY 187 (470)
T ss_dssp TSSSSBCEEECTTSSEEEE
T ss_pred ecCCccccEECCCCCccce
Confidence 1233466889999988754
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.68 E-value=2.1e-07 Score=66.59 Aligned_cols=133 Identities=9% Similarity=-0.001 Sum_probs=85.7
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc--ceecc--ceec---cCCCeeeEEEccCCCcccc----
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS--QWCLQ--HEVA---CPTLASCLTWNHSFSRFNS---- 91 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~--~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~---- 91 (197)
.+...+....+.++ +..++.++.++.+.+|++..++... ..... .... .......+++++++..+..
T Consensus 192 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~ 269 (355)
T d2bbkh_ 192 EDEFLINHPAYSQK--AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 269 (355)
T ss_dssp TTSCBCSCCEEETT--TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred eecceeeeccccCC--CCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEecc
Confidence 34555666778877 7788889999999999998764311 11100 0000 0233456788888876532
Q ss_pred -----------eeEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc
Q psy13207 92 -----------ISIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 92 -----------~~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
.+.+|| +..+. +...+.+++|+ ++.++++++..|+.|++||.++ ++.+..+.++
T Consensus 270 ~~~~~~~~~~~~v~v~d~~t~~~~~~~~--~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~t-----g~~~~~i~~~ 342 (355)
T d2bbkh_ 270 RDEWRHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES-----GEELRSVNQL 342 (355)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTT-----CCEEEEECCC
T ss_pred CCceeecCCCCeEEEEeCCCCcEEEEec--CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCC-----CCEEEEEeCc
Confidence 267888 33333 34567899999 4445557888899999999987 6777777765
Q ss_pred eecEEEEEEccC
Q psy13207 153 YCTVWRVSWNIT 164 (197)
Q Consensus 153 ~~~v~~~~~~p~ 164 (197)
......+.+.++
T Consensus 343 G~~p~~i~~~d~ 354 (355)
T d2bbkh_ 343 GHGPQVITTADM 354 (355)
T ss_dssp CSSCCEEECCCC
T ss_pred CCCccEEEeCCC
Confidence 544444554443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.41 E-value=1.8e-05 Score=57.30 Aligned_cols=157 Identities=10% Similarity=0.006 Sum_probs=88.7
Q ss_pred ceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEe-
Q psy13207 27 SVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEA- 98 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 98 (197)
.+.++.|+|+ |+++++++ ....|.+|+......+.................+.|+|+++++... +.+|+.
T Consensus 146 h~h~v~~sPd--G~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~ 223 (365)
T d1jofa_ 146 GIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp CEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceEEEECCC--CCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence 4689999999 88777765 3457888876544322211111122225678899999999976432 566661
Q ss_pred ----------eEec-------------ccCCCceeEEEEcCCCeEEEEeeC-C-----CeEEEEEccCCcccce-eeeee
Q psy13207 99 ----------HSIN-------------AEHKDLIHDVAYDYYGLRMATCSS-D-----QNIKVTRDVMGTRFDI-ETIGN 148 (197)
Q Consensus 99 ----------~~~~-------------~~~~~~i~~~~~~~~~~~~~s~~~-d-----~~i~~~d~~~~~~~~~-~~~~~ 148 (197)
.... ..+......+.++|+.-+++++.+ + ..|..|++........ ..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~ 303 (365)
T d1jofa_ 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP 303 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeE
Confidence 1110 011123456788844332344432 2 2366777654211111 11111
Q ss_pred ecCceecEEEEEEcc-CCCEEEEE-eCCCcEEEEEcCCC
Q psy13207 149 FEDHYCTVWRVSWNI-TGTIVASS-GDDGCVRLWKLKKK 185 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p-~~~~l~~~-~~dg~i~iw~~~~~ 185 (197)
.........+++++| +|++|+++ ..++.|.+|+++..
T Consensus 304 ~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 304 TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 122233457799998 78977666 47799999987653
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=9.5e-05 Score=50.44 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=39.1
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCC-C--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAAD-G--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~d-g--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (197)
+..+...+...+|||+ |+.||-.... + .+.+.+....... .............|+|+++.++.
T Consensus 34 l~~~~~~~~sP~wSPD--Gk~IAf~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~spdg~~i~~ 99 (269)
T d2hqsa1 34 VHRSPQPLMSPAWSPD--GSKLAYVTFESGRSALVIQTLANGAVR------QVASFPRHNGAPAFSPDGSKLAF 99 (269)
T ss_dssp EEEESSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEE------EEECCSSCEEEEEECTTSSEEEE
T ss_pred EecCCCceeeeEECCC--CCEEEEEEeeccCcceeeeecccCcee------EEeeeecccccceecCCCCeeeE
Confidence 3345667888999999 9888765433 3 3555555443321 11122456678889999987643
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.26 E-value=5.9e-07 Score=65.02 Aligned_cols=130 Identities=15% Similarity=-0.020 Sum_probs=79.2
Q ss_pred CCcceeEEEECCCCCCcE--E-EEEeCCCc--EEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEe
Q psy13207 24 SRTSVTDVKFGPKQLGLV--L-ATCAADGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEA 98 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~--l-~s~~~dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (197)
+.++...+...++ ++. + ++...++. +.++|..+++.+.... .. ....++|+|++++++..-
T Consensus 18 ~~g~~~~~a~~~~--~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~------~~-~~~~~a~spDg~~i~~~~----- 83 (368)
T d1mdah_ 18 SDGSSCDHGPGAI--SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSL------GA-FLSLAVAGHSGSDFALAS----- 83 (368)
T ss_dssp CCCCCBCCCCCCC--TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE------EC-TTCEEEECTTSSCEEEEE-----
T ss_pred cCCCccccccCCC--CcceeEEeeccCCCcceEEEEeCCCCcEEEEEe------CC-CCCcceECCCCCEEEEEc-----
Confidence 4555666666776 553 2 23445555 5556877776543322 11 123578888887654310
Q ss_pred eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEE
Q psy13207 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~ 171 (197)
.....+ ++|..|+.|.+||..+ .+.+..+..+ ......++|+|||++|+.+
T Consensus 84 ---------------~~~~~~--~~g~~d~~v~v~D~~t-----~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va 141 (368)
T d1mdah_ 84 ---------------TSFARS--AKGKRTDYVEVFDPVT-----FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp ---------------EEETTT--TSSSEEEEEEEECTTT-----CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEE
T ss_pred ---------------ccCccc--cccccCCeEEEEECCC-----CcEeeeecCCccceecccCCccceEECCCCCEEEEE
Confidence 001223 5677899999999977 3444433221 1123468999999999877
Q ss_pred e-CCCcEEEEEcCCCcchh
Q psy13207 172 G-DDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 172 ~-~dg~i~iw~~~~~~~~~ 189 (197)
. .++.+.+||+.+.+...
T Consensus 142 ~~~~~~v~~~d~~~~~~~~ 160 (368)
T d1mdah_ 142 LFGSSAAAGLSVPGASDDQ 160 (368)
T ss_dssp ECSSSCEEEEEETTTEEEE
T ss_pred eCCCCeEEEEECCCCcEeE
Confidence 6 57999999998876544
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.18 E-value=2.6e-05 Score=57.63 Aligned_cols=60 Identities=8% Similarity=-0.135 Sum_probs=42.1
Q ss_pred CCcceeEEEECCCCCCcEEE-EEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLA-TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (197)
|........+.|| |++|+ +...+++|.++|+.+.+..... .++.......++|+|++++.
T Consensus 70 hhP~~s~t~gtpD--Gr~lfV~d~~~~rVavIDl~t~k~~~ii----~iP~g~gphgi~~spdg~t~ 130 (441)
T d1qnia2 70 HHPHISMTDGRYD--GKYLFINDKANTRVARIRLDIMKTDKIT----HIPNVQAIHGLRLQKVPKTN 130 (441)
T ss_dssp CCCEEEEETTEEE--EEEEEEEETTTTEEEEEETTTTEEEEEE----ECTTCCCEEEEEECCSSBCC
T ss_pred cCCCcceecccCC--CCEEEEEcCCCCEEEEEECCCCcEeeEE----ecCCCCCccceEEeccCCEE
Confidence 4445566666788 88775 4468889999999987643322 22235678899999999864
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.07 E-value=1.3e-05 Score=59.32 Aligned_cols=106 Identities=10% Similarity=-0.051 Sum_probs=67.1
Q ss_pred eccCCCeeeEEEccCCCcccce------eEEEEeeEecc---c-------------CCCceeEEEEcCCCeEEEEeeCCC
Q psy13207 71 VACPTLASCLTWNHSFSRFNSI------SIMYEAHSINA---E-------------HKDLIHDVAYDYYGLRMATCSSDQ 128 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---~-------------~~~~i~~~~~~~~~~~~~s~~~d~ 128 (197)
++.......+.++|+|+++..+ +.+||+..+.. + ..-.....+|.++...+.+..-|.
T Consensus 254 IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds 333 (441)
T d1qnia2 254 IPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDS 333 (441)
T ss_dssp ECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTT
T ss_pred EeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccc
Confidence 3335566889999999987543 79999222110 1 111234457875555448888999
Q ss_pred eEEEEEccCCc-----ccceeeeee-----ecCceecEEEEEEccCCCEEEEE---eCCCc
Q psy13207 129 NIKVTRDVMGT-----RFDIETIGN-----FEDHYCTVWRVSWNITGTIVASS---GDDGC 176 (197)
Q Consensus 129 ~i~~~d~~~~~-----~~~~~~~~~-----~~~h~~~v~~~~~~p~~~~l~~~---~~dg~ 176 (197)
.|..|++.... ......+.. ..+|...+.+.+++|||++|+++ |.|..
T Consensus 334 ~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~ 394 (441)
T d1qnia2 334 QVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF 394 (441)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred eEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccccccC
Confidence 99999975210 000112222 25788888888999999999999 55543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.00 E-value=0.00015 Score=50.82 Aligned_cols=156 Identities=7% Similarity=-0.065 Sum_probs=94.4
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
+......+.+++|.|+ |+++++...++.+..++....... ...............+.+.++++.+++. +..
T Consensus 63 ~~~~~~~~~gla~~~d--G~l~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~ 138 (302)
T d2p4oa1 63 HATVEGKVSGLAFTSN--GDLVATGWNADSIPVVSLVKSDGT--VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWL 138 (302)
T ss_dssp EEECSSEEEEEEECTT--SCEEEEEECTTSCEEEEEECTTSC--EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEE
T ss_pred EEcCCCCcceEEEcCC--CCeEEEecCCceEEEEEecccccc--eeeccccCCccccceeEEccCCCEEeecccccccee
Confidence 3445678999999998 998888888888888876543211 1111222224557888999999876543 233
Q ss_pred EE-------eeEec--------ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 96 YE-------AHSIN--------AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 96 ~~-------~~~~~--------~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
++ +.... .........+.+.++.+ +++.+..+.|..++............ . ........++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l-~~~~~~~~~i~~~~~~~~~~~~~~~~--~-~~~~~pdgia 214 (302)
T d2p4oa1 139 IDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL-YVSNTEKMLLLRIPVDSTDKPGEPEI--F-VEQTNIDDFA 214 (302)
T ss_dssp EETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE-EEEETTTTEEEEEEBCTTSCBCCCEE--E-EESCCCSSEE
T ss_pred eeccCCcceeEecCCccceeeccCcccccccccccCCce-eeecCCCCeEEecccccccccccccc--c-cCCCCCcceE
Confidence 33 10100 01123456677774433 25666788888888764211111111 1 1122345699
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
++++|++.++...++.|..++...
T Consensus 215 ~d~dG~l~va~~~~~~V~~i~p~G 238 (302)
T d2p4oa1 215 FDVEGNLYGATHIYNSVVRIAPDR 238 (302)
T ss_dssp EBTTCCEEEECBTTCCEEEECTTC
T ss_pred ECCCCCEEEEEcCCCcEEEECCCC
Confidence 999999888888889999887653
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.89 E-value=0.0017 Score=46.52 Aligned_cols=155 Identities=8% Similarity=0.053 Sum_probs=84.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc--cce------e--
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF--NSI------S-- 93 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~-- 93 (197)
....+..|+|+|+ ++.|.+++. +.+..|.+.....+.... ..........+.++++++.+ +.. +
T Consensus 38 ~~~~~s~la~s~d--~~~ly~~~~-~~~~~~~i~~~~~~~~~~---~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~ 111 (365)
T d1jofa_ 38 QDEPISWMTFDHE--RKNIYGAAM-KKWSSFAVKSPTEIVHEA---SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYA 111 (365)
T ss_dssp TTCCCSEEEECTT--SSEEEEEEB-TEEEEEEEEETTEEEEEE---EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEE
T ss_pred CCCCCCEEEEcCC--CCEEEEEeC-CcEEEEEEeCCCCeEEEe---eecCCCCcEEEEECCCCCEEEEEEecCCCCEEEE
Confidence 4455677999998 888877654 567888776432221111 01112234455566666532 110 1
Q ss_pred ----------EEEE----------eeEecccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeee--c
Q psy13207 94 ----------IMYE----------AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNF--E 150 (197)
Q Consensus 94 ----------~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~--~ 150 (197)
.++. ...........+.++.|+|+.-++++++ ....|.+|+...... ....... .
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~--~~~~~~~~~~ 189 (365)
T d1jofa_ 112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE--VELVGSVDAP 189 (365)
T ss_dssp EEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC--EEEEEEEECS
T ss_pred eEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc--eeeccceeec
Confidence 1111 0000101233578999994443225544 456888887653211 1111111 1
Q ss_pred CceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCc
Q psy13207 151 DHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKR 186 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~ 186 (197)
........++|+|+++++.... .+++|.+|++...+
T Consensus 190 ~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~ 226 (365)
T d1jofa_ 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence 2234678899999999886655 67899999987643
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.88 E-value=0.00053 Score=46.78 Aligned_cols=145 Identities=10% Similarity=0.027 Sum_probs=87.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE---- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---- 97 (197)
....++++++ ++++++....+.+++++-...... ...........+++.++++.++.. +..++
T Consensus 58 ~p~gvav~~~--g~i~v~d~~~~~i~~~~~~~~~~~------~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~ 129 (260)
T d1rwia_ 58 QPQGLAVDGA--GTVYVTDFNNRVVTLAAGSNNQTV------LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK 129 (260)
T ss_dssp SCCCEEECTT--CCEEEEETTTEEEEECTTCSCCEE------CCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCS
T ss_pred CceEEEEcCC--CCEEEeeeeeceeeeeeeccceee------eeeeeeeecccccccccceeEeeccccccccccccccc
Confidence 4567889998 888777766666666554433221 111123456789999988765432 22233
Q ss_pred -eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 98 -AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 98 -~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
.............+++++++.-.+++...++.|..++.... ...............+++.++|+++++....+.
T Consensus 130 ~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~ 204 (260)
T d1rwia_ 130 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-----NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ 204 (260)
T ss_dssp SCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTC-----CEEECCCSSCCSEEEEEECTTCCEEEEETTTTE
T ss_pred eeeeeeecccCCcceeeecCCCCEeeeccccccccccccccc-----eeeeeeccccCCCccceeeeeeeeeeeecCCCE
Confidence 11111112244577888732222377777888999987642 111111233445688999999998888888888
Q ss_pred EEEEEcCC
Q psy13207 177 VRLWKLKK 184 (197)
Q Consensus 177 i~iw~~~~ 184 (197)
|..++...
T Consensus 205 i~~~~~~~ 212 (260)
T d1rwia_ 205 VVKLLAGS 212 (260)
T ss_dssp EEEECTTC
T ss_pred EEEEeCCC
Confidence 88887654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.84 E-value=0.00062 Score=47.50 Aligned_cols=116 Identities=13% Similarity=0.105 Sum_probs=75.6
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCC
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK 106 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (197)
.+..+++.|+ |+++++...+++|.-++....... +. ...
T Consensus 29 ~~e~iAv~pd--G~l~vt~~~~~~I~~i~p~g~~~~--------------------------------------~~-~~~ 67 (302)
T d2p4oa1 29 FLENLASAPD--GTIFVTNHEVGEIVSITPDGNQQI--------------------------------------HA-TVE 67 (302)
T ss_dssp CEEEEEECTT--SCEEEEETTTTEEEEECTTCCEEE--------------------------------------EE-ECS
T ss_pred CcCCEEECCC--CCEEEEeCCCCEEEEEeCCCCEEE--------------------------------------EE-cCC
Confidence 5788999999 999999998998887775432110 00 233
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..+.+++|.++.-++++...++.+..++....... ...+... ......+.+++.++++++++.+.++.+..++....
T Consensus 68 ~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~ 144 (302)
T d2p4oa1 68 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-VETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 144 (302)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-EEEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcceEEEcCCCCeEEEecCCceEEEEEecccccc-eeecccc-CCccccceeEEccCCCEEeeccccccceeeeccCC
Confidence 45667777732222277777777777776431100 1122222 23456789999999999998888888888887654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.82 E-value=0.00043 Score=48.75 Aligned_cols=73 Identities=10% Similarity=0.046 Sum_probs=52.1
Q ss_pred ceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCC
Q psy13207 108 LIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 108 ~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~ 184 (197)
....+++. ++.. ++....+.|.+||.+. ......+........+++|.|+++ ++++.+.+|+|...++..
T Consensus 227 ~pdGiavD~~Gnly--Va~~~~g~I~~~dp~~-----g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 227 GADGMDFDEDNNLL--VANWGSSHIEVFGPDG-----GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEEEBTTCCEE--EEEETTTEEEEECTTC-----BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cceeeEEecCCcEE--EEEcCCCEEEEEeCCC-----CEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 34567777 5555 7777789999999764 333344444445678999999986 556677889999999876
Q ss_pred Ccc
Q psy13207 185 KRK 187 (197)
Q Consensus 185 ~~~ 187 (197)
.++
T Consensus 300 ~G~ 302 (314)
T d1pjxa_ 300 NGK 302 (314)
T ss_dssp CBC
T ss_pred CCh
Confidence 653
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.74 E-value=0.0023 Score=43.42 Aligned_cols=142 Identities=10% Similarity=-0.061 Sum_probs=85.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
....++++.++ ++++++-.....+..++....... ............++++++++.+++. +..++
T Consensus 98 ~~p~~iavd~~--g~i~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~ 170 (260)
T d1rwia_ 98 NYPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSKTQT-----VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 170 (260)
T ss_dssp CSEEEEEECTT--CCEEEEEGGGTEEEEECTTCSSCE-----ECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeccccccccc--ceeEeeccccccccccccccceee-----eeeecccCCcceeeecCCCCEeeecccccccccccccc
Confidence 45678889887 887777666666777665443211 0111112345788999988765432 45555
Q ss_pred --eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCCEEEEEe
Q psy13207 98 --AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
...+..........|++. ++++ ++....+.|..++.... ....+ ...-.....++++++|+++++-.
T Consensus 171 ~~~~~~~~~~~~~p~gi~~d~~g~l~--vsd~~~~~i~~~~~~~~------~~~~~~~~~~~~P~~i~~d~~g~l~vad~ 242 (260)
T d1rwia_ 171 NNQVVLPFTDITAPWGIAVDEAGTVY--VTEHNTNQVVKLLAGST------TSTVLPFTGLNTPLAVAVDSDRTVYVADR 242 (260)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEE--EEETTTTEEEEECTTCS------CCEECCCCSCCCEEEEEECTTCCEEEEEG
T ss_pred ceeeeeeccccCCCccceeeeeeeee--eeecCCCEEEEEeCCCC------eEEEEccCCCCCeEEEEEeCCCCEEEEEC
Confidence 222221334556788887 4444 67777788888876431 11111 12224567899999999888877
Q ss_pred CCCcEEEEEc
Q psy13207 173 DDGCVRLWKL 182 (197)
Q Consensus 173 ~dg~i~iw~~ 182 (197)
.+++|+.++.
T Consensus 243 ~~~rI~~i~~ 252 (260)
T d1rwia_ 243 GNDRVVKLTS 252 (260)
T ss_dssp GGTEEEEECC
T ss_pred CCCEEEEEeC
Confidence 7777765543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.63 E-value=0.0037 Score=42.83 Aligned_cols=145 Identities=13% Similarity=0.106 Sum_probs=89.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
.....+++.++ |.++++....+.+.+++... +.+..+.. .........+++.++++.+++. +.+|+
T Consensus 114 ~~p~~~avd~~--G~i~v~~~~~~~~~~~~~~g-~~~~~~g~---~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G 187 (279)
T d1q7fa_ 114 QHPRGVTVDNK--GRIIVVECKVMRVIIFDQNG-NVLHKFGC---SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG 187 (279)
T ss_dssp SCEEEEEECTT--SCEEEEETTTTEEEEECTTS-CEEEEEEC---TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC
T ss_pred cccceeccccC--CcEEEEeeccceeeEeccCC-ceeecccc---cccccccceeeeccceeEEeeeccccceeeeecCC
Confidence 44567777777 77777766667777776543 22222111 1113456778888888765433 67777
Q ss_pred --eeEec-ccCCCceeEEEEc--CCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecC--ceecEEEEEEccCCCEEE
Q psy13207 98 --AHSIN-AEHKDLIHDVAYD--YYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFED--HYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 98 --~~~~~-~~~~~~i~~~~~~--~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~ 169 (197)
+..+. .+.......|++. ++.+ ++-. .++.|.+|+.. ++.+..+.. .......+++.|+|++++
T Consensus 188 ~~~~~~g~~g~~~~P~giavD~~G~i~--Vad~~~~~~v~~f~~~------G~~~~~~~~~~~~~~p~~vav~~dG~l~V 259 (279)
T d1q7fa_ 188 QYLRQIGGEGITNYPIGVGINSNGEIL--IADNHNNFNLTIFTQD------GQLISALESKVKHAQCFDVALMDDGSVVL 259 (279)
T ss_dssp CEEEEESCTTTSCSEEEEEECTTCCEE--EEECSSSCEEEEECTT------SCEEEEEEESSCCSCEEEEEEETTTEEEE
T ss_pred ceeeeecccccccCCcccccccCCeEE--EEECCCCcEEEEECCC------CCEEEEEeCCCCCCCEeEEEEeCCCcEEE
Confidence 33432 1344567888997 4433 4433 45679999854 444444422 223568899999997655
Q ss_pred EEeCCCcEEEEEcCCC
Q psy13207 170 SSGDDGCVRLWKLKKK 185 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~ 185 (197)
+..+++|++|.....
T Consensus 260 -~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 260 -ASKDYRLYIYRYVQL 274 (279)
T ss_dssp -EETTTEEEEEECSCC
T ss_pred -EeCCCeEEEEEeeee
Confidence 557899999998764
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.55 E-value=0.0045 Score=41.80 Aligned_cols=69 Identities=9% Similarity=0.083 Sum_probs=40.1
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEe-CCC-----cEEEEEcCCcccccceecc-ceeccCCCeeeEEEccCCCccc
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCA-ADG-----LVRIYEAPDVMNLSQWCLQ-HEVACPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg-----~v~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 90 (197)
.|..+.+.+....|||+ |+.||-.. .++ .|.+.+..+++..+-.... .............|+|+++.++
T Consensus 35 ~Lt~~~~~~~~p~~SPD--G~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~ 110 (281)
T d1k32a2 35 KIVSNLGVINNARFFPD--GRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLII 110 (281)
T ss_dssp EEECSSSEEEEEEECTT--SSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEecCCCcccCEEECCC--CCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEE
Confidence 35667778899999999 98887543 222 3666666665432111100 0011123456778999888764
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.35 E-value=0.0093 Score=40.74 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=84.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCC-Ccccce------eEEEE-
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSF-SRFNSI------SIMYE- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~------~~~~~- 97 (197)
....++++|+ |+++++-...+.|++||.. ++.+..+........ ......+.+.++. ..+... +..++
T Consensus 24 ~P~gvavd~d--g~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 100 (279)
T d1q7fa_ 24 EPSGVAVNAQ--NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 100 (279)
T ss_dssp CEEEEEECTT--CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred CccEEEEcCC--CCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence 4689999998 8888887778899999965 332222211100000 1122333433332 222111 23333
Q ss_pred ----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee--cCceecEEEEEEccCCCEEEEE
Q psy13207 98 ----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF--EDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
...+..........++..++..++++....+.+.+++.. .+.+..+ ..+......+++.++++++++.
T Consensus 101 ~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~------g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d 174 (279)
T d1q7fa_ 101 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN------GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 174 (279)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT------SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC------CceeecccccccccccceeeeccceeEEeee
Confidence 222321334455677776332222555566777777754 3334433 3455677889999999988888
Q ss_pred eCCCcEEEEEcC
Q psy13207 172 GDDGCVRLWKLK 183 (197)
Q Consensus 172 ~~dg~i~iw~~~ 183 (197)
...+.|.+||..
T Consensus 175 ~~~~~V~~~d~~ 186 (279)
T d1q7fa_ 175 NRAHCVKVFNYE 186 (279)
T ss_dssp GGGTEEEEEETT
T ss_pred ccccceeeeecC
Confidence 888999999865
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.22 E-value=0.015 Score=40.55 Aligned_cols=154 Identities=4% Similarity=-0.011 Sum_probs=89.5
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccce-------------
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNSI------------- 92 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------------- 92 (197)
-..+.|.++ +..++++...+.+...+........ . .....+ -.....+++.++|..+++.
T Consensus 73 P~Gl~~~~d--g~~l~vad~~~~i~~~~~~g~~~~~-~--~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~ 147 (314)
T d1pjxa_ 73 PAGCQCDRD--ANQLFVADMRLGLLVVQTDGTFEEI-A--KKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp EEEEEECSS--SSEEEEEETTTEEEEEETTSCEEEC-C--SBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred ceeEEEeCC--CCEEEEEECCCeEEEEeCCCcEEEE-E--eccccccccCCCcEEEECCCCCEEEecCccCcccccccce
Confidence 467999998 8877777777778888876543211 0 001111 1235678899988775442
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcC--CC---eEEEEeeCCCeEEEEEccCCcccc-eeeeeeecC-cee
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDY--YG---LRMATCSSDQNIKVTRDVMGTRFD-IETIGNFED-HYC 154 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~--~~---~~~~s~~~d~~i~~~d~~~~~~~~-~~~~~~~~~-h~~ 154 (197)
-.+|. ...+. ..-...+.++|++ +. .++++-+..+.|..||+....... .+....+.+ +..
T Consensus 148 ~~~~~G~v~~~~~dg~~~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T d1pjxa_ 148 MQEKFGSIYCFTTDGQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp TSSSCEEEEEECTTSCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred eccCCceEEEEeecCceeEee-CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccc
Confidence 13443 11111 1222345788872 21 223555678889888875421111 112222222 122
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
..-.+++.++|++.++....+.|.+||.+.+..
T Consensus 227 ~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~ 259 (314)
T d1pjxa_ 227 GADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC
T ss_pred cceeeEEecCCcEEEEEcCCCEEEEEeCCCCEE
Confidence 356799999999888887889999999876543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.89 E-value=0.033 Score=38.75 Aligned_cols=146 Identities=8% Similarity=0.022 Sum_probs=82.4
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 97 (197)
...+..+.|.++ |+++++-...++|.-|+......... ..........++++++|+.+++. ..++.
T Consensus 39 ~~~lEG~~~D~~--G~Ly~~D~~~g~I~ri~p~g~~~~~~-----~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~ 111 (319)
T d2dg1a1 39 GLQLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEIKRP-----FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 111 (319)
T ss_dssp CCCEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEE-----EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred CcCcEeCEECCC--CCEEEEECCCCEEEEEECCCCeEEEE-----EeCCCCCeeEEEECCCCCEEEEecCCCccceeEEE
Confidence 334578999998 88888877889998888766532211 11224457889999999876542 12222
Q ss_pred -------eeEecc--cCCCceeEEEEc--CCCeEEEEeeC------CCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 98 -------AHSINA--EHKDLIHDVAYD--YYGLRMATCSS------DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 98 -------~~~~~~--~~~~~i~~~~~~--~~~~~~~s~~~------d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+..... .-....+.+++. ++.. ++... .+.+..++.. ...+..+...-...+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~--vtd~~~~~~~~~g~v~~~~~d------g~~~~~~~~~~~~pnGia 183 (319)
T d2dg1a1 112 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFY--FTDFRGYSTNPLGGVYYVSPD------FRTVTPIIQNISVANGIA 183 (319)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEE--EEECCCBTTBCCEEEEEECTT------SCCEEEEEEEESSEEEEE
T ss_pred EcCCCceeeeeccCCCcccCCcceeEEecccee--ecccccccccCcceeEEEecc------cceeEEEeeccceeeeee
Confidence 111110 112335666666 3322 33211 1223333332 122222222223457899
Q ss_pred EccCCCEE-EEEeCCCcEEEEEcCCC
Q psy13207 161 WNITGTIV-ASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 161 ~~p~~~~l-~~~~~dg~i~iw~~~~~ 185 (197)
|+|+++.| ++-+..+.|..|+++..
T Consensus 184 ~s~dg~~lyvad~~~~~I~~~d~~~~ 209 (319)
T d2dg1a1 184 LSTDEKVLWVTETTANRLHRIALEDD 209 (319)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred eccccceEEEecccCCceEEEEEcCC
Confidence 99999865 55567889999998653
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.87 E-value=0.033 Score=38.37 Aligned_cols=160 Identities=7% Similarity=-0.076 Sum_probs=93.9
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------eE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---------SI 94 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 94 (197)
....+.++.+.++ |.++++ +.+ -+.++|..+++....... ..-.....+..+.+.|+|+..++. ..
T Consensus 57 ~~~~~~~i~~~~d--g~l~va-~~~-gl~~~d~~tg~~~~l~~~-~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~ 131 (295)
T d2ghsa1 57 LPFMGSALAKISD--SKQLIA-SDD-GLFLRDTATGVLTLHAEL-ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGS 131 (295)
T ss_dssp CSSCEEEEEEEET--TEEEEE-ETT-EEEEEETTTCCEEEEECS-STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEE
T ss_pred CCCCcEEEEEecC--CCEEEE-EeC-ccEEeecccceeeEEeee-ecCCCcccceeeEECCCCCEEEEecccccccccee
Confidence 3456788888887 877665 444 588889887653211111 000113467888999999876543 23
Q ss_pred EEE-----eeEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCccc---ceeeeeeecCceecEEEEEEccCC
Q psy13207 95 MYE-----AHSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRF---DIETIGNFEDHYCTVWRVSWNITG 165 (197)
Q Consensus 95 ~~~-----~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~ 165 (197)
+|. +..+. ..-...+.++|+++ ..++++-+..+.|..|++...... +........+.......+++..+|
T Consensus 132 l~~~~~g~~~~~~-~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~G 210 (295)
T d2ghsa1 132 IYHVAKGKVTKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG 210 (295)
T ss_dssp EEEEETTEEEEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS
T ss_pred EeeecCCcEEEEe-eccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCC
Confidence 333 22222 12234577888832 223366677888998887532111 112222333344567889999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 166 TIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 166 ~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++.++.-..+.|..||.. ++.+..
T Consensus 211 nlWva~~~~g~V~~~dp~-G~~~~~ 234 (295)
T d2ghsa1 211 HIWNARWGEGAVDRYDTD-GNHIAR 234 (295)
T ss_dssp CEEEEEETTTEEEEECTT-CCEEEE
T ss_pred CEEeeeeCCCceEEecCC-CcEeeE
Confidence 988877778889999954 444433
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.74 E-value=0.044 Score=38.09 Aligned_cols=159 Identities=8% Similarity=-0.026 Sum_probs=87.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccccee------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSIS------ 93 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 93 (197)
.......+++.++ |+++++...+ +.+...+........ .............+.+.++|+.+++..
T Consensus 80 ~~~~p~gla~~~d--G~l~va~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~ 154 (319)
T d2dg1a1 80 HKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDNLQD---IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 154 (319)
T ss_dssp SSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCSCEE---EECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred CCCCeeEEEECCC--CCEEEEecCCCccceeEEEEcCCCceeee---eccCCCcccCCcceeEEeccceeeccccccccc
Confidence 3445678899998 8777665432 233333433322111 111111234567889999998765421
Q ss_pred ---EEEE-------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccc---eeeeeeecCceecEEEE
Q psy13207 94 ---IMYE-------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFD---IETIGNFEDHYCTVWRV 159 (197)
Q Consensus 94 ---~~~~-------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~---~~~~~~~~~h~~~v~~~ 159 (197)
.+|. +..+. ..-...+.++|+++. .++++-+..+.|..|++....... ................+
T Consensus 155 ~~g~v~~~~~dg~~~~~~~-~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl 233 (319)
T d2dg1a1 155 PLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSC 233 (319)
T ss_dssp CCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEE
T ss_pred CcceeEEEecccceeEEEe-eccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeee
Confidence 2222 22222 122345779998432 223666678899999876421110 01111111112234679
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
++.++|++.++...++.|.++|. .++.+.
T Consensus 234 ~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~ 262 (319)
T d2dg1a1 234 CIDSDDNLYVAMYGQGRVLVFNK-RGYPIG 262 (319)
T ss_dssp EEBTTCCEEEEEETTTEEEEECT-TSCEEE
T ss_pred eEcCCCCEEEEEcCCCEEEEECC-CCcEEE
Confidence 99999998888888999999996 455433
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.017 Score=42.65 Aligned_cols=59 Identities=10% Similarity=0.053 Sum_probs=38.1
Q ss_pred ceeEEEECCCCCCcEEEEE---------eCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc
Q psy13207 27 SVTDVKFGPKQLGLVLATC---------AADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~---------~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (197)
.+....|+|+ +++++.. +..+.+.++|+.++.... +.........+....|+|+|+.++
T Consensus 62 ~~~~~~~SpD--~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~---l~~~~~~~~~l~~~~wSPDG~~ia 129 (465)
T d1xfda1 62 RAIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS---LDPPEVSNAKLQYAGWGPKGQQLI 129 (465)
T ss_dssp TCSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE---CCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred ccceeEECCC--CCeEEEEEcccceeEeeccccEEEEEccCCceee---ccCccCCccccceeeeccCCceEE
Confidence 5677889999 8876654 345788899998765321 111111134566788999998754
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.76 E-value=0.007 Score=44.82 Aligned_cols=125 Identities=9% Similarity=-0.021 Sum_probs=71.0
Q ss_pred EEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCcee
Q psy13207 31 VKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIH 110 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 110 (197)
..|.++ +.++. -..+|.|.+||+.+++....+. ...+ ....+....|+|++++++.. .....
T Consensus 22 ~~W~~~--~~~~~-~~~~g~i~~~~~~~~~~~~l~~-~~~~-~~~~~~~~~~SpD~~~vl~~-----------~~~~~-- 83 (465)
T d1xfda1 22 AKWISD--TEFIY-REQKGTVRLWNVETNTSTVLIE-GKKI-ESLRAIRYEISPDREYALFS-----------YNVEP-- 83 (465)
T ss_dssp CCBSSS--SCBCC-CCSSSCEEEBCGGGCCCEEEEC-TTTT-TTTTCSEEEECTTSSEEEEE-----------ESCCC--
T ss_pred CEEeCC--CcEEE-EeCCCcEEEEECCCCCEEEEEc-Cccc-cccccceeEECCCCCeEEEE-----------Ecccc--
Confidence 468887 66554 4567899999998765321111 1111 12345666777777653211 00000
Q ss_pred EEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 111 DVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 111 ~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+ .--+..+.+.++|+.+++ ...+.........+....|||||+.+|-.. ++.|.+.+...+..
T Consensus 84 --------~--~r~s~~~~~~i~d~~~~~---~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~ 146 (465)
T d1xfda1 84 --------I--YQHSYTGYYVLSKIPHGD---PQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQA 146 (465)
T ss_dssp --------C--SSSCCCSEEEEEESSSCC---CEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCC
T ss_pred --------e--eEeeccccEEEEEccCCc---eeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCce
Confidence 0 111345778899997632 222322223334556689999999998875 66788887765544
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.95 E-value=0.55 Score=31.88 Aligned_cols=128 Identities=8% Similarity=-0.047 Sum_probs=73.3
Q ss_pred ceeEEEECCCCCCcEEEEEeC----CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAA----DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMY 96 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 96 (197)
.++.+.+.|+ |++.++... .+.-.+|.+..++.... .. .-.....+.|+++++.+..+ +..|
T Consensus 104 ~~nd~~vd~~--G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~---~~---~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~ 175 (295)
T d2ghsa1 104 RSNDGRMHPS--GALWIGTMGRKAETGAGSIYHVAKGKVTKL---FA---DISIPNSICFSPDGTTGYFVDTKVNRLMRV 175 (295)
T ss_dssp EEEEEEECTT--SCEEEEEEETTCCTTCEEEEEEETTEEEEE---EE---EESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred cceeeEECCC--CCEEEEeccccccccceeEeeecCCcEEEE---ee---ccCCcceeeecCCCceEEEeecccceeeEe
Confidence 5778888887 876665432 22344555544422111 11 12345678999998865322 4444
Q ss_pred Ee--------------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 97 EA--------------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 97 ~~--------------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
++ .... ........+++. ++.. ++.-..+.|..||.. ++.+..+.--...+++++
T Consensus 176 ~~d~~~~~~~~~~~~~~~~~-~~~g~pdG~~vD~~GnlW--va~~~~g~V~~~dp~------G~~~~~i~lP~~~~T~~~ 246 (295)
T d2ghsa1 176 PLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGHIW--NARWGEGAVDRYDTD------GNHIARYEVPGKQTTCPA 246 (295)
T ss_dssp EBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSCEE--EEEETTTEEEEECTT------CCEEEEEECSCSBEEEEE
T ss_pred eecccccccccceEEEeccC-cccccccceEEcCCCCEE--eeeeCCCceEEecCC------CcEeeEecCCCCceEEEE
Confidence 41 1111 223446677887 5555 666677889999964 455555544345689999
Q ss_pred Ec-cCCCEEEEE
Q psy13207 161 WN-ITGTIVASS 171 (197)
Q Consensus 161 ~~-p~~~~l~~~ 171 (197)
|- |+.+.|+..
T Consensus 247 FGG~d~~~LyvT 258 (295)
T d2ghsa1 247 FIGPDASRLLVT 258 (295)
T ss_dssp EESTTSCEEEEE
T ss_pred EeCCCCCEEEEE
Confidence 96 576555443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=93.11 E-value=0.16 Score=33.70 Aligned_cols=55 Identities=4% Similarity=-0.096 Sum_probs=35.5
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC-CC-----cEEEEEcCCCc
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD-DG-----CVRLWKLKKKR 186 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg-----~i~iw~~~~~~ 186 (197)
.++.|.+.|+.+ ++ ...+..+...+...+|||||+.||-... ++ .|.+.+...+.
T Consensus 19 ~~~dl~~~d~~~-----g~-~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~ 79 (281)
T d1k32a2 19 CCDDLWEHDLKS-----GS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE 79 (281)
T ss_dssp ETTEEEEEETTT-----CC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred eCCcEEEEECCC-----CC-EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence 345677788875 22 3345555667888999999999986542 22 36666665543
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.03 E-value=1 Score=32.02 Aligned_cols=138 Identities=5% Similarity=0.006 Sum_probs=78.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-------cccceeccceeccCCCeeeEEEccCCCcccc--eeEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-------NLSQWCLQHEVACPTLASCLTWNHSFSRFNS--ISIMY 96 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 96 (197)
....-++.++. ..+++.|+.++ ++|-.+..-+ ....+.....+ ..+..++|+.+.-.+.. .+..+
T Consensus 37 ~~~~LLAVsn~--~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~i---p~v~~vafs~d~l~v~~~~~l~~~ 110 (381)
T d1xipa_ 37 ASLQNLDISNS--KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEI---PDVIFVCFHGDQVLVSTRNALYSL 110 (381)
T ss_dssp SCCBCEEEETT--TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEEC---TTEEEEEEETTEEEEEESSEEEEE
T ss_pred cccceEEEeCC--CCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCC---CCeEEEEeeCCEEEEEeCCCEEEE
Confidence 35667778776 55777777764 5666643221 11112222222 35788888765422221 24445
Q ss_pred E------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccccee-eeeeecCceecEEEEEEccCCCEEE
Q psy13207 97 E------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIE-TIGNFEDHYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 97 ~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~ 169 (197)
+ ..... .-...+.++.+++..+ +....++.+.++++......... -+..+.. ...+.+++|++.|..++
T Consensus 111 ~~~~l~~~~~~~-~~~~~~~~~~~~p~~~--~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~-~~~~~~v~ws~kgkq~v 186 (381)
T d1xipa_ 111 DLEELSEFRTVT-SFEKPVFQLKNVNNTL--VILNSVNDLSALDLRTKSTKQLAQNVTSFDV-TNSQLAVLLKDRSFQSF 186 (381)
T ss_dssp ESSSTTCEEEEE-ECSSCEEEEEECSSEE--EEEETTSEEEEEETTTCCEEEEEESEEEEEE-CSSEEEEEETTSCEEEE
T ss_pred Eeeccccccccc-cccccccceecCCcee--EEEecCCCEEEEEeccCccccccCCcceEEe-cCCceEEEEeCCcEEEE
Confidence 5 22222 3346788888888877 88888999999998763211000 0011111 34678899999898888
Q ss_pred EEeC
Q psy13207 170 SSGD 173 (197)
Q Consensus 170 ~~~~ 173 (197)
++..
T Consensus 187 ~~~g 190 (381)
T d1xipa_ 187 AWRN 190 (381)
T ss_dssp EEET
T ss_pred EeCC
Confidence 8743
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.30 E-value=1.2 Score=29.05 Aligned_cols=125 Identities=6% Similarity=-0.077 Sum_probs=66.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEE--cCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYE--APDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SIM 95 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 95 (197)
.......++++. ...+++...+|...||. +...... .............|+|+++.++.. +.+
T Consensus 127 ~~~~~~~~~~~~-~~~~~~~~~~g~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~ 199 (269)
T d2hqsa1 127 SNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGGAPQ------RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAK 199 (269)
T ss_dssp SCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSCCE------ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred cccccccccccc-ccceecccccCCceEeeeecccccce------eeecccccccccccccccceeEEEeecCCceeeeE
Confidence 334445566651 33445555566555554 3333211 011113456678899999987543 233
Q ss_pred EE----eeEecccCCCceeEEEEc--CCCeEEEEe-eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 96 YE----AHSINAEHKDLIHDVAYD--YYGLRMATC-SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 96 ~~----~~~~~~~~~~~i~~~~~~--~~~~~~~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
.+ ..... .+........|+ ++.+.+.+. +....+.++++.. .....+......+...+|+|-
T Consensus 200 ~~~~~~~~~~~-~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg------~~~~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 200 QDLATGGVQVL-SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG------RFKARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp EETTTCCEEEC-CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS------CCEEECCCSSSEEEEEEECCC
T ss_pred eecccccceEe-ecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCC------CCEEEEeCCCCcEEeEEeCCC
Confidence 33 22222 344556778899 444533322 2235677888864 333445555667788999983
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=91.00 E-value=1.6 Score=30.15 Aligned_cols=77 Identities=9% Similarity=-0.009 Sum_probs=44.9
Q ss_pred eEEEEcCCCeEEEEeeCC-CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC------CcEEEEEc
Q psy13207 110 HDVAYDYYGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD------GCVRLWKL 182 (197)
Q Consensus 110 ~~~~~~~~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~iw~~ 182 (197)
...++.++..+++.|+.+ ..+.+||..+.. ......+.... .-...+..+||++++.|+.+ ..+.+||.
T Consensus 79 ~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~---w~~~~~~~~~r-~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~ 154 (387)
T d1k3ia3 79 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDS---WIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 154 (387)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTE---EEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred eEEEEecCCcEEEeecCCCcceeEecCccCc---ccccccccccc-cccceeeecCCceeeeccccccccccceeeeecC
Confidence 344555333333666654 689999987632 22222222211 22456677899999988753 36899998
Q ss_pred CCCcchhhh
Q psy13207 183 KKKRKKKKE 191 (197)
Q Consensus 183 ~~~~~~~~~ 191 (197)
.+. .|..+
T Consensus 155 ~~~-~W~~~ 162 (387)
T d1k3ia3 155 SSK-TWTSL 162 (387)
T ss_dssp TTT-EEEEE
T ss_pred CCC-ceeec
Confidence 763 35443
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=89.55 E-value=1.8 Score=31.36 Aligned_cols=63 Identities=8% Similarity=-0.082 Sum_probs=40.9
Q ss_pred CCCeeeEEEccCCCcccce------eEEEEeeEec----------------ccCCCceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 74 PTLASCLTWNHSFSRFNSI------SIMYEAHSIN----------------AEHKDLIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
......+..+|||+++.++ +.++|+..+. ....-.-...+|.++.-...|.--|..|.
T Consensus 274 pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~ 353 (459)
T d1fwxa2 274 ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 353 (459)
T ss_dssp ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEE
Confidence 5567789999999997654 6888821111 01233446677884444225556799999
Q ss_pred EEEcc
Q psy13207 132 VTRDV 136 (197)
Q Consensus 132 ~~d~~ 136 (197)
-|++.
T Consensus 354 kw~~~ 358 (459)
T d1fwxa2 354 KWNIE 358 (459)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99985
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=85.98 E-value=4.6 Score=29.05 Aligned_cols=68 Identities=9% Similarity=0.078 Sum_probs=40.6
Q ss_pred eeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce---eccCCCeeeEEEccC
Q psy13207 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE---VACPTLASCLTWNHS 85 (197)
Q Consensus 15 w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 85 (197)
++......+ -..-++|+|.|+ |++|++--.+|.|++++..++.......+... .........++++|+
T Consensus 17 f~~~~ia~~-L~~P~~la~~pd--g~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 17 FDKKVILSN-LNKPHALLWGPD--NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SCEEEEECC-CSSEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred cEEEEEECC-CCCceEEEEeCC--CeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 344433444 345679999999 98888775679999998766543221111111 111345667777775
|