Psyllid ID: psy13210

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
Protein Sequence
MFALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcHHcccHHHHHcccccccccccccHHHHHHHHHHccccccccccEccccccccccccHHHHHHHHHHcccccEHHHHHHHHHccccccccccHccccHccHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MFALRTVFHQLCRAFYAYEkdaqdggfsKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIEsmirtdpfrhkfvcyacdyfsynigcmrshirthtgekpyAHIIRNHyrkhtgrkpfkcvvcKQFFATYSGAYQHLRRTHGQESI
Flexible Loop (DISEMBL)
MFALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCatsaeltqheirtiesmirtdpfRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI
Low Complexity Region (SEG)
MFALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI
Disordered region (IsUnstruct)
**ALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHL*********
Disordered Region (DISOPRED)
*FALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLE******************TIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH*****
Disordered Region (DISEMBL)
MFALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHL*********
Disordered Region (DISPRO)
MFALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATY****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFALRTVFHQLCRAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	155	2.2.26 [Sep-21-2011]
Q08875	886	Protein suppressor of hai	N/A	N/A	0.464	0.081	0.349	1e-09
P08970	941	Protein suppressor of hai	no	N/A	0.464	0.076	0.349	1e-09
Q08876	899	Protein suppressor of hai	N/A	N/A	0.477	0.082	0.341	2e-09
Q2EI21	1501	RE1-silencing transcripti	N/A	N/A	0.445	0.045	0.375	4e-09
Q8VIG1	1082	RE1-silencing transcripti	no	N/A	0.458	0.065	0.357	5e-09
O54963	1069	RE1-silencing transcripti	yes	N/A	0.458	0.066	0.357	5e-09
Q13127	1097	RE1-silencing transcripti	no	N/A	0.458	0.064	0.357	6e-09
Q9GZV8	571	PR domain zinc finger pro	yes	N/A	0.451	0.122	0.320	6e-09
Q05516	673	Zinc finger and BTB domai	no	N/A	0.509	0.117	0.366	6e-09
Q802Y8	671	Zinc finger and BTB domai	no	N/A	0.464	0.107	0.385	7e-09

>sp|Q08875|SUHW_DROAN Protein suppressor of hairy wing OS=Drosophila ananassae GN=su(Hw) PE=2 SV=1

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 11/83 (13%)

Query: 81  KFVCYACDYFSYNIGCMRSHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKC 129
           +++C+ C    Y++  +  HIRTHTGEKP+              ++ H R HTG KP+ C
Sbjct: 413 EYMCHVCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKLSALVALKKHRRYHTGEKPYSC 472

Query: 130 VVCKQFFATYSGAYQHLRRTHGQ 152
            VC Q FA      +H++R  G+
Sbjct: 473 TVCNQAFAVKEVLNRHMKRHTGE 495

Su(Hw) controls the phenotypic effect of the gypsy transposable element. Binds specifically to a region of the gipsy element located 3' of the 5'LTR. It is probably a transcription factor. Could play a role in the establishment of chromatin domains.
Drosophila ananassae (taxid: 7217)

>sp|P08970|SUHW_DROME Protein suppressor of hairy wing OS=Drosophila melanogaster GN=su(Hw) PE=1 SV=2

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 11/83 (13%)

Query: 81  KFVCYACDYFSYNIGCMRSHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKC 129
           +++C+ C    Y++  +  HIRTHTGEKP+              ++ H R HTG KP+ C
Sbjct: 412 EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSC 471

Query: 130 VVCKQFFATYSGAYQHLRRTHGQ 152
            VC Q FA      +H++R  G+
Sbjct: 472 TVCNQAFAVKEVLNRHMKRHTGE 494

Component of the gypsy chromatin insulator complex which is required for the function of the gypsy chromatin insulator and other endogenous chromatin insulators. Chromatin insulators are regulatory elements which establish independent domains of transcriptional activity within eukaryotic genomes. Insulators have two defining properties; they can block the communication between an enhancer and a promoter when placed between them and can also buffer transgenes from position effect variegation (PEV). Insulators are proposed to structure the chromatin fiber into independent domains of differing transcriptional potential by promoting the formation of distinct chromatin loops. This chromatin looping may involve the formation of insulator bodies, where homotypic interactions between individual subunits of the insulator complex could promote the clustering of widely spaced insulators at the nuclear periphery. Within the gypsy insulator complex, this protein binds specifically to a region of the gypsy element located 3' of the 5' long terminal repeat (LTR), and may also mediate interaction with other endogenous insulators at sites distinct from those recognized by Cp190.

Drosophila melanogaster (taxid: 7227)

>sp|Q08876|SUHW_DROVI Protein suppressor of hairy wing OS=Drosophila virilis GN=su(Hw) PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 11/85 (12%)

Query: 79  RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRKHTGRKPF 127
           + +++C+ C    Y++  +  HIRTHTGEKP+              ++ H R HTG KP+
Sbjct: 409 KPEYMCHVCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPY 468

Query: 128 KCVVCKQFFATYSGAYQHLRRTHGQ 152
            C VC Q FA      +H++R  G+
Sbjct: 469 TCTVCSQSFAVKEVLNRHMKRHTGE 493

Su(Hw) controls the phenotypic effect of the gypsy transposable element. Binds specifically to a region of the gipsy element located 3' of the 5'LTR. It is probably a transcription factor. Could play a role in the establishment of chromatin domains.

Drosophila virilis (taxid: 7244)

>sp|Q2EI21|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis GN=rest-a PE=2 SV=1

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 82  FVCYACDYFSYNIGCMRSHIRTHTGEKPYAHII-----------RNHYRKHTGRKPFKCV 130
           + C  C YFS        HIRTHTGE+PY  II             H R H+G KPFKC 
Sbjct: 274 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICLYSSSQKTHLTRHMRTHSGEKPFKCE 333

Query: 131 VCKQFFATYSGAYQHLRRTH 150
            C    +      +H R+ H
Sbjct: 334 QCSYVASNQHEVTRHARQVH 353

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells (By similarity). Plays a role in the early development of the nervous system and is required for proper patterning of the neuroectoderm during gastrulation. This involves the correct speciation of the neuroepithelial domain and adequate development of the non-neural ectoderm.

Xenopus laevis (taxid: 8355)

>sp|Q8VIG1|REST_MOUSE RE1-silencing transcription factor OS=Mus musculus GN=Rest PE=2 SV=2

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 13/84 (15%)

Query: 79  RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKP 126
           R  + C  C+YFS        H+RTHTGE+PY             H+ R H R H+G KP
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTR-HMRTHSGEKP 326

Query: 127 FKCVVCKQFFATYSGAYQHLRRTH 150
           FKC  C    +      +H R+ H
Sbjct: 327 FKCDQCNYVASNQHEVTRHARQVH 350

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Mus musculus (taxid: 10090)

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 13/84 (15%)

Query: 79  RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKP 126
           R  + C  C+YFS        H+RTHTGE+PY             H+ R H R H+G KP
Sbjct: 272 RKVYTCSKCNYFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTR-HMRTHSGEKP 330

Query: 127 FKCVVCKQFFATYSGAYQHLRRTH 150
           FKC  C    +      +H R+ H
Sbjct: 331 FKCDQCNYVASNQHEVTRHARQVH 354

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Rattus norvegicus (taxid: 10116)

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 13/84 (15%)

Query: 79  RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKP 126
           R  + C  C+YFS        H+RTHTGE+PY             H+ R H R H+G KP
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTR-HMRTHSGEKP 331

Query: 127 FKCVVCKQFFATYSGAYQHLRRTH 150
           FKC  C    +      +H R+ H
Sbjct: 332 FKCDQCSYVASNQHEVTRHARQVH 355

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Homo sapiens (taxid: 9606)

>sp|Q9GZV8|PRD14_HUMAN PR domain zinc finger protein 14 OS=Homo sapiens GN=PRDM14 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 84  CYACDYFSYNIGCMRSHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKCVVC 132
           C  C         +  H+R H+G++PY           + I+R H R+H+G KPFKC  C
Sbjct: 463 CSTCGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKRFTASSILRTHIRQHSGEKPFKCKYC 522

Query: 133 KQFFATYSGAYQHLRRTHGQE 153
            + FA+++    H+RR+H ++
Sbjct: 523 GKSFASHAAHDSHVRRSHKED 543

Transcription factor that has both positive and negative roles on transcription. Required for the maintenance of emryonic stem cell identity and the reacquisition of pluripotency in somatic cells. May play an essential role in germ cell development at 2 levels: the reacquisition of potential pluripotency, including SOX2 up-regulation, and successful epigenetic reprogramming, characterized by EHMT1 repression (By similarity). Directly up-regulates the expression of pluripotency gene POU5F1 through its proximal enhancer. Binds to the DNA consensus sequence 5'-GGTC[TC]CTAA-3'.

Homo sapiens (taxid: 9606)

>sp|Q05516|ZBT16_HUMAN Zinc finger and BTB domain-containing protein 16 OS=Homo sapiens GN=ZBTB16 PE=1 SV=2

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)

Query: 73  IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRKH 121
           +R+    H + C  C     +   ++SH R HTGEKPY            H +  HYR H
Sbjct: 537 LRSHTGDHPYECEFCGSCFRDESTLKSHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVH 596

Query: 122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHG 151
           TG KPF+C +C Q    YS   +HLR  +G
Sbjct: 597 TGEKPFECKLCHQRSRDYSAMIKHLRTHNG 626

Probable transcription factor. May play a role in myeloid maturation and in the development and/or maintenance of other differentiated tissues. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Homo sapiens (taxid: 9606)

>sp|Q802Y8|ZB16A_DANRE Zinc finger and BTB domain-containing protein 16-A OS=Danio rerio GN=zbtb16a PE=1 SV=1

 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 80  HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRKHTGRKPFK 128
           H F C  C     +   ++ H R HTGEKPY            H +  HYR HTG KPF+
Sbjct: 542 HPFECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFE 601

Query: 129 CVVCKQFFATYSGAYQHLRRTHG 151
           C +C Q    YS   +HLR  +G
Sbjct: 602 CKLCHQRSRDYSAMIKHLRTHNG 624

Probable transcription factor. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Inhibits neurogenesis.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
242012658	945	predicted protein [Pediculus humanus cor	0.270	0.044	0.857	1e-11
307212118	899	Kinase suppressor of Ras 2 [Harpegnathos	0.322	0.055	0.7	2e-11
347966004	1057	AGAP001482-PA [Anopheles gambiae str. PE	0.283	0.041	0.772	6e-11
383861184	900	PREDICTED: kinase suppressor of Ras 1-li	0.316	0.054	0.72	7e-11
156548452	897	PREDICTED: kinase suppressor of Ras 1-li	0.316	0.054	0.7	1e-10
328778880	920	PREDICTED: kinase suppressor of Ras 2 is	0.316	0.053	0.7	2e-10
340711827	913	PREDICTED: kinase suppressor of Ras 2-li	0.316	0.053	0.7	2e-10
380030129	906	PREDICTED: kinase suppressor of Ras 2-li	0.316	0.054	0.7	2e-10
345485975	920	PREDICTED: kinase suppressor of Ras 1-li	0.316	0.053	0.7	2e-10
350402744	913	PREDICTED: kinase suppressor of Ras 2-li	0.251	0.042	0.846	8e-10

>gi|242012658|ref|XP_002427046.1| predicted protein [Pediculus humanus corporis] gi|212511294|gb|EEB14308.1| predicted protein [Pediculus humanus corporis]

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/42 (85%), Positives = 39/42 (92%)

Query: 29 KLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          ++KRALDV QSMIDISADRLE LRTQCATSAELTQ EIRT+E
Sbjct: 9  EIKRALDVLQSMIDISADRLEGLRTQCATSAELTQQEIRTLE 50

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212118|gb|EFN87977.1| Kinase suppressor of Ras 2 [Harpegnathos saltator]

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    +++RALDV QSMID+SADRLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DGEDTTEQEIRRALDVVQSMIDLSADRLEGLRTQCSTSAELTQQEIRTLE 52

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347966004|ref|XP_321641.5| AGAP001482-PA [Anopheles gambiae str. PEST] gi|333470255|gb|EAA01809.5| AGAP001482-PA [Anopheles gambiae str. PEST]

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/44 (77%), Positives = 39/44 (88%)

Query: 30 LKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMI 73
          ++R LDV QSMIDISADRLE LRTQCATSAELTQ EIRT+E+ +
Sbjct: 53 IRRGLDVIQSMIDISADRLEGLRTQCATSAELTQQEIRTLETKL 96

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861184|ref|XP_003706066.1| PREDICTED: kinase suppressor of Ras 1-like [Megachile rotundata]

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/50 (72%), Positives = 42/50 (84%), Gaps = 1/50 (2%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    +++RALDV QSMIDISADRLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DGEDAE-QEIRRALDVVQSMIDISADRLEGLRTQCSTSAELTQQEIRTLE 51

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548452|ref|XP_001605076.1| PREDICTED: kinase suppressor of Ras 1-like isoform 1 [Nasonia vitripennis]

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    ++++ALDV QSMIDISADRLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DTEDAE-QEIRKALDVVQSMIDISADRLEGLRTQCSTSAELTQQEIRTLE 51

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778880|ref|XP_393005.3| PREDICTED: kinase suppressor of Ras 2 isoform 1 [Apis mellifera]

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    +++RALDV QSMIDISA+RLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DGEDAE-QEIRRALDVVQSMIDISAERLEGLRTQCSTSAELTQQEIRTLE 51

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711827|ref|XP_003394470.1| PREDICTED: kinase suppressor of Ras 2-like [Bombus terrestris]

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    +++RALDV QSMIDISA+RLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DGEDAE-QEIRRALDVVQSMIDISAERLEGLRTQCSTSAELTQQEIRTLE 51

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030129|ref|XP_003698708.1| PREDICTED: kinase suppressor of Ras 2-like [Apis florea]

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    +++RALDV QSMIDISA+RLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DGEDAE-QEIRRALDVVQSMIDISAERLEGLRTQCSTSAELTQQEIRTLE 51

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485975|ref|XP_003425378.1| PREDICTED: kinase suppressor of Ras 1-like isoform 2 [Nasonia vitripennis]

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)

Query: 21 DAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          D +D    ++++ALDV QSMIDISADRLE LRTQC+TSAELTQ EIRT+E
Sbjct: 3  DTEDAE-QEIRKALDVVQSMIDISADRLEGLRTQCSTSAELTQQEIRTLE 51

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350402744|ref|XP_003486588.1| PREDICTED: kinase suppressor of Ras 2-like [Bombus impatiens]

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/39 (84%), Positives = 36/39 (92%)

Query: 32 RALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIE 70
          RALDV QSMIDISA+RLE LRTQC+TSAELTQ EIRT+E
Sbjct: 13 RALDVVQSMIDISAERLEGLRTQCSTSAELTQQEIRTLE 51

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
ZFIN|ZDB-GENE-060503-623	228	si:dkey-20i20.3 "si:dkey-20i20	0.696	0.473	0.328	4.5e-11
ZFIN|ZDB-GENE-080218-25	283	zgc:173575 "zgc:173575" [Danio	0.625	0.342	0.330	7.9e-11
UNIPROTKB|J9P607	505	J9P607 "Uncharacterized protei	0.516	0.158	0.380	1.2e-10
UNIPROTKB|F1M4S4	154	F1M4S4 "Uncharacterized protei	0.561	0.564	0.355	2e-10
ZFIN|ZDB-GENE-050208-704	198	si:dkey-1b17.5 "si:dkey-1b17.5	0.606	0.474	0.339	3.2e-10
UNIPROTKB|F1LVP6	85	F1LVP6 "Uncharacterized protei	0.438	0.8	0.421	3.2e-10
UNIPROTKB|P17032	561	ZNF37A "Zinc finger protein 37	0.464	0.128	0.385	6.1e-10
ZFIN|ZDB-GENE-110913-152	265	si:dkey-199m13.1 "si:dkey-199m	0.625	0.366	0.321	6.5e-10
ZFIN|ZDB-GENE-110913-150	265	si:dkey-233e3.5 "si:dkey-233e3	0.625	0.366	0.321	6.5e-10
ZFIN|ZDB-GENE-110913-174	265	si:dkey-199m13.5 "si:dkey-199m	0.625	0.366	0.321	6.5e-10

ZFIN|ZDB-GENE-060503-623 si:dkey-20i20.3 "si:dkey-20i20.3" [Danio rerio (taxid:7955)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 41/125 (32%), Positives = 61/125 (48%)

Query:    41 IDISADRLERLR-TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRS 99
             I + A  +  L  TQC  S   T+     +   +R       F C  CD+   N+G ++S
Sbjct:    83 ISVKATAVNSLTCTQCGKS--FTRKS--GLNDHMRIHTGEKPFKCPHCDWRFSNLGNLKS 138

Query:   100 HIRTHTGEKP---------YAH--IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRR 148
             HIR HTGEKP         ++H  ++++H R HTG KP+KC  C + F+      +H   
Sbjct:   139 HIRLHTGEKPHQCSQCGKRFSHPGVLKSHLRIHTGEKPYKCSHCGKQFSVLRNMKRH-ES 197

Query:   149 THGQE 153
             TH +E
Sbjct:   198 THTEE 202

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080218-25 zgc:173575 "zgc:173575" [Danio rerio (taxid:7955)]

 Score = 154 (59.3 bits), Expect = 7.9e-11, P = 7.9e-11
 Identities = 37/112 (33%), Positives = 56/112 (50%)

Query:    53 TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY-- 110
             TQC  S + + H  R +  MI T   ++ F C  C      +  +++H+R HTGEKPY  
Sbjct:    87 TQCGKSFKQSSHVTRHM--MIHTG--KNSFTCTQCGKSFSQLSNLKNHMRIHTGEKPYTC 142

Query:   111 -------AH--IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
                    +H   +  H + HTG KPF C  C++ F+  S  Y H+R   G++
Sbjct:   143 TPCGKSFSHSSTLNQHMKIHTGEKPFTCTQCRKSFSKSSLLYTHMRVHTGEK 194

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|J9P607 J9P607 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 158 (60.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 35/92 (38%), Positives = 47/92 (51%)

Query:    74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY-------AHI----IRNHYRKHT 122
             RT      + C+ C        C++ H RTHTGEKPY       A +    +R H R HT
Sbjct:   370 RTHTGEKPYKCHLCGKAFITSSCLKKHERTHTGEKPYKCLLCGKAFVTSSNLREHERTHT 429

Query:   123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQES 154
             G KP+KC +C++ F T S   +H  RTH  E+
Sbjct:   430 GEKPYKCPLCEKAFVTSSNLREH-ERTHTGEN 460

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M4S4 F1M4S4 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 38/107 (35%), Positives = 52/107 (48%)

Query:    55 CATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY---- 110
             C +S  L +H        IRT      + C  C         +++H RTHTGEKPY    
Sbjct:    55 CKSSGRLGRH--------IRTHTGEKPYECNQCGKAFAQSNNLQNHKRTHTGEKPYECNQ 106

Query:   111 -------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
                    ++ ++NH R HTG KP++C  C Q FA YS  +Q  +RTH
Sbjct:   107 CGKAFARSNNLQNHKRTHTGEKPYECNQCGQTFA-YSSTFQQHKRTH 152

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-050208-704 si:dkey-1b17.5 "si:dkey-1b17.5" [Danio rerio (taxid:7955)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 37/109 (33%), Positives = 53/109 (48%)

Query:    53 TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY-- 110
             T C  S    ++ +RT   MI T    +K  C  CD   Y    +++H RTHTGEKPY  
Sbjct:    94 THCGKSFR-DKYNLRT-HMMIHTGEKPYK--CSHCDKRFYTSAHLKTHERTHTGEKPYKC 149

Query:   111 AHI---------IRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
             +H          ++ H R HTG KP++C  C   F  +S   +H ++ H
Sbjct:   150 SHCEKRFADLGHMKTHERTHTGEKPYRCSDCGNSFKLFSYLQRHTKKYH 198

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1LVP6 F1LVP6 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 35/83 (42%), Positives = 43/83 (51%)

Query:    85 YACDYFSYNIGC---MRSHIRTHTGEKPYA----------H-IIRNHYRKHTGRKPFKCV 130
             Y C+       C   +RSH RTHTGEKPY           H  ++NH RKHTG KP+ C 
Sbjct:     4 YECNQCCKVFACYSTLRSHKRTHTGEKPYECNQCGKAFSRHSYLQNHRRKHTGEKPYACN 63

Query:   131 VCKQFFATYSGAYQHLRRTHGQE 153
              C + FA YS   +H +R H  E
Sbjct:    64 QCNKVFAWYSALKRH-KRAHTGE 85

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P17032 ZNF37A "Zinc finger protein 37A" [Homo sapiens (taxid:9606)]

 Score = 152 (58.6 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 32/83 (38%), Positives = 42/83 (50%)

Query:    82 FVCYACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRKHTGRKPFKCV 130
             + CYAC         +  H R HTGEKPY              +  H R HTG KP++C+
Sbjct:   383 YECYACGKAFLRKSDLIKHQRIHTGEKPYECNECGKSFSEKSTLTKHLRTHTGEKPYECI 442

Query:   131 VCKQFFATYSGAYQHLRRTHGQE 153
              C +FF  YSG  +HLRR  G++
Sbjct:   443 QCGKFFCYYSGFTEHLRRHTGEK 465

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

ZFIN|ZDB-GENE-110913-152 si:dkey-199m13.1 "si:dkey-199m13.1" [Danio rerio (taxid:7955)]

 Score = 145 (56.1 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 36/112 (32%), Positives = 49/112 (43%)

Query:    53 TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP--- 109
             TQC  S   + H    +  MI T      F C  C         +  H+R HTGEKP   
Sbjct:    97 TQCGKSFNCSSH--LKLHMMIHTG--EKPFTCTQCGKSFIRSSSLNLHMRIHTGEKPFTC 152

Query:   110 --------YAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
                     Y+  ++ H R HTG KPF C +C + F+  S  Y H+R   G++
Sbjct:   153 TQCGKSFSYSSYLKQHIRIHTGEKPFACTLCGKSFSCSSHLYHHMRIHTGEK 204

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-150 si:dkey-233e3.5 "si:dkey-233e3.5" [Danio rerio (taxid:7955)]

 Score = 145 (56.1 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 36/112 (32%), Positives = 49/112 (43%)

Query:    53 TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP--- 109
             TQC  S   + H    +  MI T      F C  C         +  H+R HTGEKP   
Sbjct:    97 TQCGKSFNCSSH--LKLHMMIHTG--EKPFTCTQCGKSFIRSSSLNLHMRIHTGEKPFTC 152

Query:   110 --------YAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
                     Y+  ++ H R HTG KPF C +C + F+  S  Y H+R   G++
Sbjct:   153 TQCGKSFSYSSYLKQHIRIHTGEKPFACTLCGKSFSCSSHLYHHMRIHTGEK 204

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-174 si:dkey-199m13.5 "si:dkey-199m13.5" [Danio rerio (taxid:7955)]

 Score = 145 (56.1 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 36/112 (32%), Positives = 49/112 (43%)

Query:    53 TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP--- 109
             TQC  S   + H    +  MI T      F C  C         +  H+R HTGEKP   
Sbjct:    97 TQCGRSFNCSSH--LKLHMMIHTG--EKPFTCTQCGKSFIRSSSLNLHMRIHTGEKPFTC 152

Query:   110 --------YAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
                     Y+  ++ H R HTG KPF C +C + F+  S  Y H+R   G++
Sbjct:   153 TQCGKSFSYSSYLKQHIRIHTGEKPFACTLCGKSFSCSSHLYHHMRIHTGEK 204

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	155
pfam13543	129	pfam13543, KSR1-SAM, SAM like domain present in ki	7e-15

>gnl|CDD|205721 pfam13543, KSR1-SAM, SAM like domain present in kinase suppressor RAS 1

 Score = 66.6 bits (163), Expect = 7e-15
 Identities = 23/38 (60%), Positives = 28/38 (73%)

Query: 34 LDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIES 71
              Q +IDISA+ L  LRTQCATS+ELTQ EIR +E+
Sbjct: 1  CKDLQDLIDISAEHLIGLRTQCATSSELTQQEIRALEA 38

Length = 129

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	155
KOG2462|consensus	279		99.89
KOG2462|consensus	279		99.84
KOG1074|consensus	958		99.76
KOG3576|consensus	267		99.63
KOG3623|consensus	1007		99.61
KOG1074|consensus	958		99.57
KOG3623|consensus	1007		99.4
KOG3608|consensus	467		99.37
KOG3608|consensus	467		99.36
PHA00733	128	hypothetical protein	99.27
KOG3576|consensus	267		99.26
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.12
PHA02768	55	hypothetical protein; Provisional	99.03
PHA02768	55	hypothetical protein; Provisional	98.91
KOG3993|consensus	500		98.83
PLN03086	567	PRLI-interacting factor K; Provisional	98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.62
PHA00733	128	hypothetical protein	98.61
PHA00732	79	hypothetical protein	98.58
KOG3993|consensus	500		98.58
PHA00616	44	hypothetical protein	98.56
PHA00616	44	hypothetical protein	98.51
PLN03086	567	PRLI-interacting factor K; Provisional	98.35
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.27
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.2
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.2
PHA00732	79	hypothetical protein	98.15
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.11
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.04
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.01
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.91
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.91
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.81
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.74
smart00355	26	ZnF_C2H2 zinc finger.	97.47
smart00355	26	ZnF_C2H2 zinc finger.	97.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.25
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.22
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.16
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.12
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.04
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.96
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.9
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.78
PRK04860	160	hypothetical protein; Provisional	96.77
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.46
KOG1146|consensus	1406		96.44
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.23
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.97
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.74
PRK04860	160	hypothetical protein; Provisional	95.69
COG5048	467	FOG: Zn-finger [General function prediction only]	95.27
COG4049	65	Uncharacterized protein containing archaeal-type C	94.91
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.7
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	93.93
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.23
KOG2893|consensus	341		92.57
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	92.13
KOG2893|consensus	341		92.06
KOG2231|consensus	669		91.74
COG5048	467	FOG: Zn-finger [General function prediction only]	91.61
KOG1146|consensus	1406		91.56
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	91.43
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.26
COG4049	65	Uncharacterized protein containing archaeal-type C	91.05
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	90.09
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	90.0
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	89.95
COG1592	166	Rubrerythrin [Energy production and conversion]	89.84
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	89.41
KOG4173|consensus	253		89.4
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	88.63
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	87.33
KOG2482|consensus	423		86.64
COG5236	493	Uncharacterized conserved protein, contains RING Z	85.29
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	84.68
smart00531	147	TFIIE Transcription initiation factor IIE.	83.66
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	83.2
PHA00626	59	hypothetical protein	82.83
KOG2186|consensus	276		82.11
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	82.09
KOG2482|consensus	423		81.9
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	81.73
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.54
KOG2071|consensus	579		81.04

>KOG2462|consensus

Probab=99.89  E-value=4.5e-24  Score=151.05  Aligned_cols=112  Identities=28%  Similarity=0.339  Sum_probs=96.9

Q ss_pred             CcchhhhhhcccccccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         26 GFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      .+.++...............+.|..|+++|.+...|..|.        ++|.  -+++|.+||+.|...+-|+-|+++|+
T Consensus       142 T~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHi--------rTH~--l~c~C~iCGKaFSRPWLLQGHiRTHT  211 (279)
T KOG2462|consen  142 TSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHI--------RTHT--LPCECGICGKAFSRPWLLQGHIRTHT  211 (279)
T ss_pred             cccccchhhcccccccccccccCCCCCceeeehHHHhhHh--------hccC--CCcccccccccccchHHhhccccccc
Confidence            3344444444455555567888999999999999999999        9987  67899999999999999999999999


Q ss_pred             CCCCcH-----------HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        106 GEKPYA-----------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       106 ~~~~~~-----------~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ||+||.           ++|+.|+.+|.+.++|.|..|+|+|...+.|.+|..
T Consensus       212 GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  212 GEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             CCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            999997           899999999999999999999999999999999975

>KOG2462|consensus

Probab=99.84  E-value=1.4e-21  Score=138.42  Aligned_cols=105  Identities=30%  Similarity=0.529  Sum_probs=92.5

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCC---CCCcccccccccccccHHHHHHHHhHhcC-------CCCcH
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDP---FRHKFVCYACDYFSYNIGCMRSHIRTHTG-------EKPYA  111 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~---~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------~~~~~  111 (155)
                      ....+.|+.|++.+.+.++|.+|.        ++|.   ..+.+.|++||+.|.....|.+|+++|+-       -+.|.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHk--------Q~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFS  198 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHK--------QTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFS  198 (279)
T ss_pred             cCCceeccccccccccccccchhh--------cccccccccccccCCCCCceeeehHHHhhHhhccCCCccccccccccc
Confidence            346788999999999999999999        8885   47789999999999999999999999982       12222


Q ss_pred             --HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        112 --HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       112 --~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                        =-|.-|+|+|||||||.|+.|+|.|.-.++|+.|++ +|++.|+
T Consensus       199 RPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~~K~  243 (279)
T KOG2462|consen  199 RPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ-THSDVKK  243 (279)
T ss_pred             chHHhhcccccccCCCCccCCcccchhcchHHHHHHHH-hhcCCcc
Confidence              367889999999999999999999999999999999 8998874

>KOG1074|consensus

Probab=99.76  E-value=1.7e-19  Score=143.24  Aligned_cols=58  Identities=17%  Similarity=0.276  Sum_probs=53.5

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      ...+|..|.++|.+.+.|..|.        +.|++++||+|.+||..|.++.+|+.|...|..+.|
T Consensus       352 ~khkCr~CakvfgS~SaLqiHl--------RSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p  409 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHL--------RSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYP  409 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhh--------hccCCCCCeeecccccccccccceeeeeeeccccCC
Confidence            4567999999999999999999        999999999999999999999999999998876553

>KOG3576|consensus

Probab=99.63  E-value=5.4e-17  Score=110.64  Aligned_cols=102  Identities=22%  Similarity=0.296  Sum_probs=82.8

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcH----------
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA----------  111 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~----------  111 (155)
                      +...+.|..|++.|.....|.+|+        ..|...+.+.|..||+.|.+..+|++|+++|+|.+||+          
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~--------kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftq  185 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHL--------KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQ  185 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHh--------hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHh
Confidence            346788999999999999999999        99999999999999999999999999999999888876          


Q ss_pred             -HHHHHHHH-hcc----------CCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        112 -HIIRNHYR-KHT----------GRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       112 -~~l~~H~~-~h~----------~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                       ..|..|.+ +|.          .++-|.|+.||.+-.....+..|+..+|.
T Consensus       186 rcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  186 RCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             hccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence             34555643 343          23457788888887777777788775543

>KOG3623|consensus

Probab=99.61  E-value=2.8e-16  Score=123.81  Aligned_cols=82  Identities=20%  Similarity=0.367  Sum_probs=75.8

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHh
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRK  120 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~  120 (155)
                      ...+.|-|+.|++.|...+.|.+|.        =.|++.+||+|.+|.+.|+.+..|..|++.|.               
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHK--------YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHS---------------  946 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHK--------YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHS---------------  946 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhh--------hhhcCCCCcccchhhHhhhhhhhhhhhhhhcc---------------
Confidence            3447899999999999999999998        78999999999999999999999888887777               


Q ss_pred             ccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        121 HTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       121 h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                        ||+||.|+.|+|+|+...+..+||.
T Consensus       947 --GEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  947 --GEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             --CCCcchhhhhhhhcccccchHhhhc
Confidence              8888999999999999999999987

>KOG1074|consensus

Probab=99.57  E-value=1.2e-15  Score=121.73  Aligned_cols=60  Identities=18%  Similarity=0.274  Sum_probs=54.0

Q ss_pred             cChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         43 ISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        43 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      ..+-.|-+|.++..-.+.|+.|.        ++|++++||+|.+||+.|.++.+|+-|+.+|-..-++
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHy--------rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~  662 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHY--------RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA  662 (958)
T ss_pred             CCccceeeeeecccchhhhhhhh--------hcccCcCccccccccchhccccchhhcccccccCccc
Confidence            35667999999999999999999        9999999999999999999999999999998754333

>KOG3623|consensus

Probab=99.40  E-value=1.6e-13  Score=108.59  Aligned_cols=97  Identities=23%  Similarity=0.420  Sum_probs=78.7

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCC-------------CCcH
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE-------------KPYA  111 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------~~~~  111 (155)
                      ...|..|.+.+.....|..|++.      +-...+..|.|..|.++|.+...|.+|+.+|..-             +.|+
T Consensus       210 lltcpycdrgykrltslkeHiky------rhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFK  283 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKY------RHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFK  283 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHH------HHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccc
Confidence            44599999999999999999742      2223556789999999999999999999988531             2222


Q ss_pred             -----------HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        112 -----------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       112 -----------~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                                 ..|+.|+|+|.||+||.|+-|+|+|+...+...|+.
T Consensus       284 CtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  284 CTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             ccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence                       778999999999999999999999999999988875

>KOG3608|consensus

Probab=99.37  E-value=1.4e-12  Score=95.91  Aligned_cols=111  Identities=23%  Similarity=0.439  Sum_probs=79.4

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhh------------------hhhhc-cCCCCCcccccccccccccHHHHHHHHhHh
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTI------------------ESMIR-TDPFRHKFVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~------------------~~~~~-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      +.|.|..|.+.|.+...|..|+..++                  ..|++ .|...+||+|+.|++.|.+.+.|.+|...|
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~H  315 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVH  315 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhc
Confidence            45666666666666666666654221                  12224 456788999999999999999999999888


Q ss_pred             cCCCCcH-------------HHHHHHHHh-ccCC--CCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        105 TGEKPYA-------------HIIRNHYRK-HTGR--KPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       105 ~~~~~~~-------------~~l~~H~~~-h~~~--~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      . +-.|.             ..+++|++. |.|.  .+|.|..|++.|.+-.+|.+|++..|+-..|
T Consensus       316 S-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~P  381 (467)
T KOG3608|consen  316 S-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLP  381 (467)
T ss_pred             c-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCC
Confidence            7 32232             568888765 5454  4699999999999999999999888875443

>KOG3608|consensus

Probab=99.36  E-value=1.7e-12  Score=95.39  Aligned_cols=105  Identities=24%  Similarity=0.311  Sum_probs=84.0

Q ss_pred             ccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCC--Cc-------
Q psy13210         40 MIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK--PY-------  110 (155)
Q Consensus        40 ~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~-------  110 (155)
                      .+..+..-|+.|+.-|++...|-.|...      ++-....+|+|..|.+.|.+...|..|+..|..--  |.       
T Consensus       202 Hs~eKvvACp~Cg~~F~~~tkl~DH~rR------qt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~  275 (467)
T KOG3608|consen  202 HSNEKVVACPHCGELFRTKTKLFDHLRR------QTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSS  275 (467)
T ss_pred             cCCCeEEecchHHHHhccccHHHHHHHh------hhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCC
Confidence            3444667799999999999999999732      34445678999999999999999999998886421  11       


Q ss_pred             HHHHHHHHHh-ccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        111 AHIIRNHYRK-HTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       111 ~~~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .+.|.+|++. |+.++||+|+.|++.|.+.+.|.+|.. .|+
T Consensus       276 ~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS  316 (467)
T KOG3608|consen  276 ASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHS  316 (467)
T ss_pred             hHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hcc
Confidence            2788889887 888899999999999999999999988 776

>PHA00733 hypothetical protein

Probab=99.27  E-value=1.2e-11  Score=80.59  Aligned_cols=88  Identities=16%  Similarity=0.244  Sum_probs=70.4

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ....+.|..|...|.....|..+.+  +..++.+ .+.+||+|+.||+.|.....|..|++.|.                
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~--l~~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~----------------   97 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSY--LYKLLTS-KAVSPYVCPLCLMPFSSSVSLKQHIRYTE----------------   97 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHH--HHhhccc-CCCCCccCCCCCCcCCCHHHHHHHHhcCC----------------
Confidence            3467789999999998887777732  2223233 34789999999999999999998887552                


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                         .+|.|++|++.|.+...|..|++..|+
T Consensus        98 ---~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         98 ---HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ---cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence               258999999999999999999997775

>KOG3576|consensus

Probab=99.26  E-value=2.3e-12  Score=88.19  Aligned_cols=72  Identities=18%  Similarity=0.257  Sum_probs=60.2

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhH-hcCCCCcH-----------
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYA-----------  111 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~-----------  111 (155)
                      ..+-|..||+.|...-+|.+|+        ++|++.+||+|..|++.|....+|..|.+. |.....|.           
T Consensus       144 kr~lct~cgkgfndtfdlkrh~--------rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vc  215 (267)
T KOG3576|consen  144 KRHLCTFCGKGFNDTFDLKRHT--------RTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVC  215 (267)
T ss_pred             HHHHHhhccCcccchhhhhhhh--------ccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeee
Confidence            5566999999999999999999        999999999999999999999999999875 54333332           


Q ss_pred             ----------HHHHHHHHhccC
Q psy13210        112 ----------HIIRNHYRKHTG  123 (155)
Q Consensus       112 ----------~~l~~H~~~h~~  123 (155)
                                ..+..|++.|..
T Consensus       216 edcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  216 EDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             cccCCCCCChhHHHHHHHhcCC
Confidence                      567778877543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.12  E-value=5.3e-11  Score=56.01  Aligned_cols=26  Identities=46%  Similarity=0.980  Sum_probs=23.7

Q ss_pred             HHHHHHHhccCCCCeecCcCcccccC
Q psy13210        113 IIRNHYRKHTGRKPFKCVVCKQFFAT  138 (155)
Q Consensus       113 ~l~~H~~~h~~~~~~~C~~C~k~f~~  138 (155)
                      +|.+|+++|+|++||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999974

...

>PHA02768 hypothetical protein; Provisional

Probab=99.03  E-value=1.2e-10  Score=63.84  Aligned_cols=44  Identities=20%  Similarity=0.345  Sum_probs=38.8

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHH
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY  143 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~  143 (155)
                      -|+|+.||+.|...++|..|+++|+                   ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-------------------k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-------------------TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-------------------CcccCCcccceecccceeE
Confidence            3799999999999999999988875                   3699999999999888774

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=3.5e-10  Score=61.97  Aligned_cols=45  Identities=11%  Similarity=0.050  Sum_probs=40.6

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHH
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMR   98 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   98 (155)
                      -+|.|+.||+.|....+|..|+        ++|.  ++++|..|++.|...+.|.
T Consensus         4 ~~y~C~~CGK~Fs~~~~L~~H~--------r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          4 LGYECPICGEIYIKRKSMITHL--------RKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cccCcchhCCeeccHHHHHHHH--------HhcC--CcccCCcccceecccceeE
Confidence            4689999999999999999999        9998  6899999999999877654

>KOG3993|consensus

Probab=98.83  E-value=1e-09  Score=82.55  Aligned_cols=103  Identities=17%  Similarity=0.205  Sum_probs=75.8

Q ss_pred             cChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcC--------CCCcHHH-
Q psy13210         43 ISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG--------EKPYAHI-  113 (155)
Q Consensus        43 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------~~~~~~~-  113 (155)
                      .+.|-|..|...|...-.|.+|.        -...-...|+|++|+|+|+-..+|..|++=|..        ..|-+.. 
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQHr--------C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~  336 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQHR--------CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAV  336 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhcc--------CCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhh
Confidence            47888999999999999999996        444444569999999999999999999998852        2221111 


Q ss_pred             ----HHHH-HHh--ccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        114 ----IRNH-YRK--HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       114 ----l~~H-~~~--h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                          +.+- .+.  -..+.-|.|.+|+|.|..+.-|+.|+.++|..+
T Consensus       337 ~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  337 ETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                0000 000  022346999999999999999999988666544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.78  E-value=1.3e-08  Score=80.58  Aligned_cols=91  Identities=14%  Similarity=0.156  Sum_probs=71.3

Q ss_pred             hhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcH--------------
Q psy13210         46 DRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA--------------  111 (155)
Q Consensus        46 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~--------------  111 (155)
                      +.|+.|+..|. ...|..|+        .++.  +++.|+ ||+.+ ....|..|+.+|.+++++.              
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~--------~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~  520 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHM--------KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSA  520 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHH--------HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccc
Confidence            57999999885 57889998        7663  789999 99765 6689999998888877764              


Q ss_pred             -------HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        112 -------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       112 -------~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                             ..|..|..+. |.+++.|..||+.+... .+..|+...|.
T Consensus       521 ~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        521 MDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             cchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence                   1577888885 88889999999888775 56667765664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.62  E-value=1.2e-08  Score=47.83  Aligned_cols=26  Identities=27%  Similarity=0.367  Sum_probs=22.9

Q ss_pred             HHhhhHHhhhhhhhccCCCCCccccccccccccc
Q psy13210         60 ELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYN   93 (155)
Q Consensus        60 ~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~   93 (155)
                      +|..|+        ++|++++||+|++|++.|.+
T Consensus         1 ~l~~H~--------~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM--------RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH--------HHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHh--------hhcCCCCCCCCCCCcCeeCc
Confidence            467777        99999999999999999964

...

>PHA00733 hypothetical protein

Probab=98.61  E-value=5.5e-08  Score=63.47  Aligned_cols=54  Identities=22%  Similarity=0.209  Sum_probs=47.5

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ...+|.|+.|++.|.....|..|+        +.+  ..+|.|+.|++.|.....|..|+....
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~--------r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHI--------RYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHH--------hcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            356899999999999999999999        765  357999999999999999999988744

>PHA00732 hypothetical protein

Probab=98.58  E-value=4.1e-08  Score=58.53  Aligned_cols=44  Identities=30%  Similarity=0.618  Sum_probs=29.6

Q ss_pred             cccccccccccccHHHHHHHHhH-hcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ||.|+.||+.|.+..+|..|++. |.                    ++.|+.||+.|.   .|..|.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--------------------~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--------------------LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--------------------CCccCCCCCEeC---Chhhhhc
Confidence            46777777777777777777663 43                    246777777776   3666665

>KOG3993|consensus

Probab=98.58  E-value=1e-08  Score=77.34  Aligned_cols=85  Identities=16%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             HHHhhhhhcccCCCcchhhhhhcccccccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccC----------------
Q psy13210         13 RAFYAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTD----------------   76 (155)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~----------------   76 (155)
                      ..+..+.|..|-..+..-.......-..+..-.|+|..|+++|+-..+|..|.        +.|                
T Consensus       263 n~iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHR--------RWHKPR~eaa~a~~~P~k~  334 (500)
T KOG3993|consen  263 NVIGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHR--------RWHKPRPEAAKAGSPPPKQ  334 (500)
T ss_pred             ccHHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhh--------cccCCchhhhhcCCCChhh
Confidence            33445555555443322222233334456667899999999999999999998        555                


Q ss_pred             -----------------CCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         77 -----------------PFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        77 -----------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                                       ..+..|.|.+|++.|++...|..|+.+|.
T Consensus       335 ~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  335 AVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                             11235899999999999999999998875

>PHA00616 hypothetical protein

Probab=98.56  E-value=3.2e-08  Score=51.70  Aligned_cols=29  Identities=17%  Similarity=0.445  Sum_probs=24.9

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ||+|+.||+.|.+.+.|.+|++ .|.+++|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r-~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL-SVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH-HhcCCCc
Confidence            6999999999999999999999 4555454

>PHA00616 hypothetical protein

Probab=98.51  E-value=5.7e-08  Score=50.77  Aligned_cols=29  Identities=10%  Similarity=0.205  Sum_probs=23.5

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      ||+|+.||+.|..++.|..|++.|+++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            57899999999998888888888875544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.35  E-value=1e-06  Score=70.08  Aligned_cols=100  Identities=15%  Similarity=0.274  Sum_probs=72.1

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhh-----------hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc--
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESM-----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY--  110 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~-----------~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~--  110 (155)
                      ....|..|..... ...|..|...+...-           .+...-++.+.|+.|++.|. ...|..|+.+|+  .++  
T Consensus       406 ~~V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~C  481 (567)
T PLN03086        406 DTVECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQC  481 (567)
T ss_pred             CeEECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccc-hHHHHHHHHhcC--CCccC
Confidence            4456888876654 457778874333211           11112245678999999996 688999999864  222  


Q ss_pred             -------HHHHHHHHHhccCCCCeecCcCcccccC----------chHHHHHHh
Q psy13210        111 -------AHIIRNHYRKHTGRKPFKCVVCKQFFAT----------YSGAYQHLR  147 (155)
Q Consensus       111 -------~~~l~~H~~~h~~~~~~~C~~C~k~f~~----------~~~L~~H~~  147 (155)
                             ...|..|+.+|.+++++.|.+|++.|..          .+.|..|+.
T Consensus       482 pCg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~  535 (567)
T PLN03086        482 PCGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHES  535 (567)
T ss_pred             CCCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHH
Confidence                   2789999999999999999999999952          458999988

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.27  E-value=6.6e-07  Score=40.56  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=20.6

Q ss_pred             ccccccccccccHHHHHHHHhHh
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67999999999999999998875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.26  E-value=2.1e-06  Score=47.53  Aligned_cols=52  Identities=21%  Similarity=0.494  Sum_probs=39.5

Q ss_pred             cccccccccccccHHHHHHHHhH-hcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .|.||+|++ ..+...|..|... |..                ..+.+.|++|...+.  .+|.+|+...|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~----------------~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRS----------------ESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcC----------------CCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 4556788888665 442                234699999998755  499999997663

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.20  E-value=1.1e-06  Score=39.86  Aligned_cols=22  Identities=36%  Similarity=0.859  Sum_probs=20.9

Q ss_pred             eecCcCcccccCchHHHHHHhh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRR  148 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~  148 (155)
                      |.|+.|++.|.+.+.|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            7899999999999999999984

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.20  E-value=1.8e-07  Score=68.40  Aligned_cols=70  Identities=19%  Similarity=0.345  Sum_probs=50.5

Q ss_pred             CCCcccccc--cccccccHHHHHHHHhH-hcCCCCcHH-HHHHHHHhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210         78 FRHKFVCYA--CDYFSYNIGCMRSHIRT-HTGEKPYAH-IIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus        78 ~~~~~~C~~--C~~~f~~~~~l~~H~~~-h~~~~~~~~-~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ++|||+|++  |.+.++....|+-|+.- |...+.... .-..+..--...+||.|++|+|++.+-..|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            359999998  99999999999999875 432221110 00011111336789999999999999999999976

>PHA00732 hypothetical protein

Probab=98.15  E-value=9.9e-07  Score=52.60  Aligned_cols=47  Identities=17%  Similarity=0.134  Sum_probs=38.9

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhcc-CCCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRT-DPFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ++.|+.|++.|....+|..|+        +. |.   ++.|+.||+.|.   .+..|..+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~--------r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHA--------RRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHh--------hcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            378999999999999999999        63 54   358999999998   5778876654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.11  E-value=2.4e-06  Score=38.81  Aligned_cols=24  Identities=38%  Similarity=0.782  Sum_probs=20.1

Q ss_pred             eecCcCcccccCchHHHHHHhhhh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      |.|++|++.|.+...|..|++.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.04  E-value=3.3e-06  Score=39.77  Aligned_cols=25  Identities=32%  Similarity=0.667  Sum_probs=22.7

Q ss_pred             CeecCcCcccccCchHHHHHHhhhh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      ||.|..|++.|.+...|..|++.++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999999444

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.01  E-value=4.1e-06  Score=51.90  Aligned_cols=66  Identities=23%  Similarity=0.460  Sum_probs=21.6

Q ss_pred             cccccccccccHHHHHHHHhH-hcCCCCcH------HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhh
Q psy13210         83 VCYACDYFSYNIGCMRSHIRT-HTGEKPYA------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRT  149 (155)
Q Consensus        83 ~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~------~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~  149 (155)
                      +|..|+..|.+...|..|+.. |.-..+-.      ..+..+.+.- -...+.|.+|++.|.+...|..|++..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccccccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            478888888888888888765 43222211      2222232221 122699999999999999999999943

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.91  E-value=9.9e-06  Score=36.69  Aligned_cols=23  Identities=35%  Similarity=0.592  Sum_probs=18.9

Q ss_pred             ccccccccccccHHHHHHHHhHh
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      |+|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            67999999999999999999876

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.91  E-value=1.4e-05  Score=44.21  Aligned_cols=51  Identities=12%  Similarity=0.116  Sum_probs=39.1

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCC-CCcccccccccccccHHHHHHHHhHhc
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPF-RHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      .|.|+.|++ ..+...|..|..       ..|.. .+.+.||+|...+.  .+|..|+..+.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~-------~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCE-------DEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHH-------hHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            588999999 566789999973       55654 45799999998654  48888887753

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.81  E-value=2.5e-05  Score=41.84  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=23.8

Q ss_pred             CCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         77 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        77 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      .++.|.+|++|+..+....+|.+|+.++.+.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            567899999999999999999999988776665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.74  E-value=1.8e-05  Score=37.14  Aligned_cols=25  Identities=28%  Similarity=0.583  Sum_probs=21.4

Q ss_pred             cccccccccccccHHHHHHHHhHhc
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5789999999999999999988764

>smart00355 ZnF_C2H2 zinc finger

Probab=97.47  E-value=9.8e-05  Score=33.77  Aligned_cols=25  Identities=32%  Similarity=0.745  Sum_probs=22.3

Q ss_pred             eecCcCcccccCchHHHHHHhhhhCC
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |.|+.|++.|.+.+.|..|++ .|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~-~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR-THXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH-Hhcc
Confidence            679999999999999999999 6653

>smart00355 ZnF_C2H2 zinc finger

Probab=97.43  E-value=0.00014  Score=33.21  Aligned_cols=24  Identities=25%  Similarity=0.552  Sum_probs=20.9

Q ss_pred             ccccccccccccHHHHHHHHhHhc
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999988765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.25  E-value=0.00036  Score=37.42  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=21.9

Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      .+.|-.|++|+..+++..+|++|+...|..
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            567899999999999999999999866653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.22  E-value=0.00034  Score=31.73  Aligned_cols=24  Identities=33%  Similarity=0.587  Sum_probs=19.5

Q ss_pred             eecCcCcccccCchHHHHHHhhhhC
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      |.|+.|+.... .+.|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999998 9999999997664

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.16  E-value=0.00032  Score=43.29  Aligned_cols=58  Identities=16%  Similarity=0.192  Sum_probs=21.6

Q ss_pred             hhhhhhhhccCcHHHhhhHHhhhhhh----------hc--cC---CCCCcccccccccccccHHHHHHHHhHh
Q psy13210         47 RLERLRTQCATSAELTQHEIRTIESM----------IR--TD---PFRHKFVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        47 ~c~~C~~~~~~~~~l~~h~~~~~~~~----------~~--~~---~~~~~~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      .|..|+..|.+...|..|+.....-.          .+  ..   .-...+.|.+|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            37778888888888888863111100          00  00   0122589999999999999999999974

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.12  E-value=0.00036  Score=31.94  Aligned_cols=21  Identities=38%  Similarity=0.797  Sum_probs=20.1

Q ss_pred             eecCcCcccccCchHHHHHHh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      |.|++|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            689999999999999999998

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.04  E-value=0.00043  Score=31.65  Aligned_cols=23  Identities=26%  Similarity=0.579  Sum_probs=19.2

Q ss_pred             ccccccccccccHHHHHHHHhHh
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888999999999998888764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.96  E-value=0.00017  Score=53.19  Aligned_cols=60  Identities=12%  Similarity=0.128  Sum_probs=46.1

Q ss_pred             cChhhhhh--hhhhccCcHHHhhhHHhhhhhh-----------hccCCCCCcccccccccccccHHHHHHHHh
Q psy13210         43 ISADRLER--LRTQCATSAELTQHEIRTIESM-----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIR  102 (155)
Q Consensus        43 ~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~-----------~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  102 (155)
                      ..+|+|++  |++.+.....|+-|+.....+.           ...-...|||.|++|++.++....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            37899976  9999999999999985433222           111134589999999999999999988854

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.90  E-value=0.00093  Score=30.26  Aligned_cols=23  Identities=22%  Similarity=0.673  Sum_probs=17.9

Q ss_pred             ccccccccccccHHHHHHHHhHhc
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      |+|+.|+.... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67999999998 889999988854

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.78  E-value=0.0006  Score=31.92  Aligned_cols=21  Identities=29%  Similarity=0.792  Sum_probs=20.1

Q ss_pred             eecCcCcccccCchHHHHHHh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      |.|+.|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            789999999999999999987

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.77  E-value=0.00083  Score=45.49  Aligned_cols=27  Identities=22%  Similarity=0.516  Sum_probs=20.5

Q ss_pred             HHHHHHhccCCCCeecCcCcccccCch
Q psy13210        114 IRNHYRKHTGRKPFKCVVCKQFFATYS  140 (155)
Q Consensus       114 l~~H~~~h~~~~~~~C~~C~k~f~~~~  140 (155)
                      +.+|.++|+++++|.|..|+..|....
T Consensus       131 ~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        131 VRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             HHHHHHHhcCCccEECCCCCceeEEec
Confidence            445555566888999999999987654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.46  E-value=0.0013  Score=30.70  Aligned_cols=22  Identities=27%  Similarity=0.699  Sum_probs=18.1

Q ss_pred             ccccccccccccHHHHHHHHhH
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      |-|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5688888888888888888765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=96.44  E-value=0.00099  Score=57.44  Aligned_cols=96  Identities=20%  Similarity=0.350  Sum_probs=70.0

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhH-hcC-CCCcHHHHHHHHHh--
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTG-EKPYAHIIRNHYRK--  120 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~~~l~~H~~~--  120 (155)
                      ...|..|+..+...+.+..|++       ..+...+.++|+.|+..|+....|..|++. |.. ...|......|.+.  
T Consensus       436 l~e~~~~e~~~~s~r~~~~~t~-------~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~ar  508 (1406)
T KOG1146|consen  436 LVELTKAEPLLESKRSLEGQTV-------VLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLAR  508 (1406)
T ss_pred             cccccchhhhhhhhccccccee-------eeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccc
Confidence            3446677777777777777763       456667889999999999999999999998 433 22233222223222  


Q ss_pred             ----ccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        121 ----HTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       121 ----h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                          -.+.+||.|..|..+++....|.+|+.
T Consensus       509 g~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  509 GEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             cccccCCCCcccceeeeeeeecchHHHHHHH
Confidence                124568999999999999999999986

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.23  E-value=0.0045  Score=28.42  Aligned_cols=21  Identities=19%  Similarity=0.278  Sum_probs=16.5

Q ss_pred             ccccccccccccHHHHHHHHhH
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      .+|+.||+.| ..+.|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4699999999 77778888653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.97  E-value=0.0054  Score=28.13  Aligned_cols=20  Identities=20%  Similarity=0.472  Sum_probs=17.5

Q ss_pred             eecCcCcccccCchHHHHHHh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      .+|+.||+.| ..+.|.+|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            5799999999 7788999976

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.74  E-value=0.0076  Score=29.74  Aligned_cols=22  Identities=27%  Similarity=0.560  Sum_probs=20.4

Q ss_pred             CeecCcCcccccCchHHHHHHh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      +|.|++|++.|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            6899999999999999999976

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK04860 hypothetical protein; Provisional

Probab=95.69  E-value=0.004  Score=42.22  Aligned_cols=39  Identities=15%  Similarity=0.182  Sum_probs=32.6

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHH
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIG   95 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~   95 (155)
                      .|.|. |+.   ....+.+|+        +++.++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~--------ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHN--------RVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHH--------HHhcCCccEECCCCCceeEEec
Confidence            58897 887   556888998        9999999999999999886543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.27  E-value=0.0023  Score=49.19  Aligned_cols=98  Identities=20%  Similarity=0.263  Sum_probs=76.2

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhc--cCCCC--Cccccc--ccccccccHHHHHHHHhHhcCCCCcH-------
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIR--TDPFR--HKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYA-------  111 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~-------  111 (155)
                      .+.|..|...|.....+..|.        +  .|..+  +++.|+  .|++.|.....+..|...|.+..++.       
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~--------~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHL--------RSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSS  360 (467)
T ss_pred             CCCCccccCCccccccccccc--------cccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCc
Confidence            577999999999999999999        7  79998  999999  79999999999999999998766553       


Q ss_pred             -----------------------------------------HHHHHHHHhccCCC--CeecCcCcccccCchHHHHHHhh
Q psy13210        112 -----------------------------------------HIIRNHYRKHTGRK--PFKCVVCKQFFATYSGAYQHLRR  148 (155)
Q Consensus       112 -----------------------------------------~~l~~H~~~h~~~~--~~~C~~C~k~f~~~~~L~~H~~~  148 (155)
                                                               ..+..|...|...+  .+.+..|.+.|.....+..|++ 
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  439 (467)
T COG5048         361 SKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKK-  439 (467)
T ss_pred             cccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccc-
Confidence                                                     11222333343433  3567778888888888888877 


Q ss_pred             hhC
Q psy13210        149 THG  151 (155)
Q Consensus       149 ~H~  151 (155)
                      .|.
T Consensus       440 ~~~  442 (467)
T COG5048         440 IHT  442 (467)
T ss_pred             ccc
Confidence            443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.91  E-value=0.015  Score=31.78  Aligned_cols=30  Identities=23%  Similarity=0.595  Sum_probs=26.6

Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      -||--+.|+-||+.|...-+..+|....|+
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            467779999999999999999999987775

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.70  E-value=0.028  Score=27.63  Aligned_cols=23  Identities=17%  Similarity=0.397  Sum_probs=20.0

Q ss_pred             cccccccccccccHHHHHHHHhH
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      +|.|.+|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57899999999999999988875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=93.93  E-value=0.037  Score=34.97  Aligned_cols=31  Identities=26%  Similarity=0.595  Sum_probs=24.5

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCc
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATY  139 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~  139 (155)
                      ...|+.||+.|+..                            +..|..|+.||..|.-.
T Consensus         9 KR~Cp~CG~kFYDL----------------------------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYDL----------------------------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhccC----------------------------CCCCccCCCCCCccCcc
Confidence            35799999999654                            34578999999988766

The function of members of this family is unknown.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.23  E-value=0.47  Score=29.91  Aligned_cols=71  Identities=23%  Similarity=0.424  Sum_probs=45.1

Q ss_pred             CcccccccccccccHHHHHHHHhH-hcCCCCcH-HHHHHHHHhcc--------------CCC---------Ceec----C
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYA-HIIRNHYRKHT--------------GRK---------PFKC----V  130 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~-~~l~~H~~~h~--------------~~~---------~~~C----~  130 (155)
                      +...|..|+..... +.+..|++. |....... ..+..-.+...              +..         -|.|    .
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            45679999887766 888888884 43222221 11111111100              011         1889    9


Q ss_pred             cCcccccCchHHHHHHhhhhC
Q psy13210        131 VCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       131 ~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .|++...+...+.+|++..|+
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999997774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=92.57  E-value=0.025  Score=40.48  Aligned_cols=45  Identities=18%  Similarity=0.297  Sum_probs=36.1

Q ss_pred             hhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHH-HhHh
Q psy13210         48 LERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTH  104 (155)
Q Consensus        48 c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  104 (155)
                      |..|++.|....-|.+|+        ++    |-|+|.+|-+...+.-.|..| +.+|
T Consensus        13 cwycnrefddekiliqhq--------ka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQ--------KA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhh--------hh----ccceeeeehhhhccCCCceeehhhhh
Confidence            889999999999999999        33    459999999887777666655 4444

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=92.13  E-value=0.076  Score=26.57  Aligned_cols=34  Identities=15%  Similarity=0.263  Sum_probs=24.6

Q ss_pred             hhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccc
Q psy13210         46 DRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSY   92 (155)
Q Consensus        46 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~   92 (155)
                      ..|+.|+..|.-..+             .+.......+|+.|+..|.
T Consensus         3 i~Cp~C~~~y~i~d~-------------~ip~~g~~v~C~~C~~~f~   36 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDE-------------KIPPKGRKVRCSKCGHVFF   36 (36)
T ss_pred             EECCCCCCEEeCCHH-------------HCCCCCcEEECCCCCCEeC
Confidence            458888888876544             4455566789999998873

>KOG2893|consensus

Probab=92.06  E-value=0.048  Score=39.08  Aligned_cols=51  Identities=20%  Similarity=0.434  Sum_probs=41.6

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .|+| |=+|++.|.+..-|..|++.-.                     |+|.+|.|..-+--.|..|--++|.
T Consensus         9 ~kpw-cwycnrefddekiliqhqkakh---------------------fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQKAKH---------------------FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhhhcc---------------------ceeeeehhhhccCCCceeehhhhhh
Confidence            3566 7889999999999998877543                     8999999998888888888655664

>KOG2231|consensus

Probab=91.74  E-value=0.2  Score=41.23  Aligned_cols=95  Identities=16%  Similarity=0.044  Sum_probs=49.8

Q ss_pred             HHHHhHHHhhhhhcccCCCc------------chhhhhhcccccc-cccChhhhhhhh---------hhccCcHHHhhhH
Q psy13210          8 FHQLCRAFYAYEKDAQDGGF------------SKLKRALDVNQSM-IDISADRLERLR---------TQCATSAELTQHE   65 (155)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~~~c~~C~---------~~~~~~~~l~~h~   65 (155)
                      ....+.++....|..++..+            ..+.....+..++ ..+..+.|..|-         ....+...|..|+
T Consensus        90 ~y~~~~~~~~~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~  169 (669)
T KOG2231|consen   90 TYTKLEACLHHSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHL  169 (669)
T ss_pred             HHHHHHHHHhhhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHH
Confidence            34555566667777776655            1233333444443 444555665541         2223445566665


Q ss_pred             HhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         66 IRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      .....+ .+.+.+ . -.|..|...|-....|.+|++.+.
T Consensus       170 ~~gd~d-~~s~rG-h-p~C~~C~~~fld~~el~rH~~~~h  206 (669)
T KOG2231|consen  170 MFGDPD-DESCRG-H-PLCKFCHERFLDDDELYRHLRFDH  206 (669)
T ss_pred             hcCCCc-cccccC-C-ccchhhhhhhccHHHHHHhhccce
Confidence            222110 011111 1 258888888888888888887643

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.61  E-value=0.047  Score=41.95  Aligned_cols=57  Identities=25%  Similarity=0.502  Sum_probs=47.4

Q ss_pred             CcccccccccccccHHHHHHHHh--HhcCCCCcHHHHHHHHHhccCC--CCeecC--cCcccccCchHHHHHHhhhhCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIR--THTGEKPYAHIIRNHYRKHTGR--KPFKCV--VCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~~~~~~~l~~H~~~h~~~--~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      .++.|..|...|.....|..|.+  .|.                 ++  +|+.|+  .|++.|.+...+.+|.. .|.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-----------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-----------------GESLKPFSCPYSLCGKLFSRNDALKRHIL-LHTSI  349 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-----------------cccCCceeeeccCCCccccccccccCCcc-cccCC
Confidence            46789999999999998888877  455                 67  789999  79999999999999998 66654


Q ss_pred             C
Q psy13210        154 S  154 (155)
Q Consensus       154 ~  154 (155)
                      +
T Consensus       350 ~  350 (467)
T COG5048         350 S  350 (467)
T ss_pred             C
Confidence            3

>KOG1146|consensus

Probab=91.56  E-value=0.03  Score=48.83  Aligned_cols=98  Identities=10%  Similarity=0.135  Sum_probs=66.6

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcH--HHHHHHHH
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA--HIIRNHYR  119 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~--~~l~~H~~  119 (155)
                      ..+.+.|..|...+...-.+. +.           ....+|.|..|.-.|.....|..|.+.-.  +.+.  .....+..
T Consensus      1257 ~sGe~~c~~~~~~~~~~~~~~-~l-----------~~~~~~~~~~~~~~~~~~~~l~~~~~k~~--~~~~~~~~~~~~~l 1322 (1406)
T KOG1146|consen 1257 ASGEGECGAVDELLTPSFGIS-TL-----------DVTHRYLCRQCKMAFDGEAPLTAHQRKFC--FAGRGSGGSMPPPL 1322 (1406)
T ss_pred             CCCcchhhhccccccCcccee-ec-----------ccchhHHHHHHHhhhcchhHHHHHHHHHH--hccCccccCCCCcc
Confidence            346677888888777655544 43           22356889999999999988888873211  0000  22233344


Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .+..-.+| |..|...|+....|..|++..+...|
T Consensus      1323 ~~~d~~~~-c~~c~~~~~~~~alqihm~~~~~~~k 1356 (1406)
T KOG1146|consen 1323 RVPDCTYH-CLACEVLLSGREALQIHMRSSAHRRK 1356 (1406)
T ss_pred             cCcccccc-chHHHhhcchhHHHHHHHHHhhhccc
Confidence            45555667 99999999999999999998776654

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.43  E-value=0.22  Score=25.95  Aligned_cols=28  Identities=29%  Similarity=0.549  Sum_probs=19.3

Q ss_pred             CCCCeecCcCcccccC----chHHHHHHhhhh
Q psy13210        123 GRKPFKCVVCKQFFAT----YSGAYQHLRRTH  150 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~----~~~L~~H~~~~H  150 (155)
                      ++....|.+|++.+..    .+.|.+|++..|
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            4556789999998876    489999996455

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.26  E-value=0.11  Score=25.41  Aligned_cols=11  Identities=36%  Similarity=0.866  Sum_probs=8.5

Q ss_pred             CCeecCcCccc
Q psy13210        125 KPFKCVVCKQF  135 (155)
Q Consensus       125 ~~~~C~~C~k~  135 (155)
                      .++.|++||..
T Consensus        16 ~~~~CP~Cg~~   26 (33)
T cd00350          16 APWVCPVCGAP   26 (33)
T ss_pred             CCCcCcCCCCc
Confidence            46899999863

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.05  E-value=0.14  Score=28.09  Aligned_cols=29  Identities=10%  Similarity=0.075  Sum_probs=20.3

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHhH
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      +..++.-+.||-||..|....+..+|...
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            34456667777777777777777777664

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=90.09  E-value=0.21  Score=32.29  Aligned_cols=34  Identities=18%  Similarity=0.256  Sum_probs=25.1

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHH
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGA  142 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L  142 (155)
                      ...|+.||+.|+..                            +..|..|+.||..|.-...+
T Consensus         9 Kr~Cp~cg~kFYDL----------------------------nk~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300         9 KRICPNTGSKFYDL----------------------------NRRPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             cccCCCcCcccccc----------------------------CCCCccCCCcCCccCcchhh
Confidence            35799999998653                            34578999999988665333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=90.00  E-value=0.13  Score=25.79  Aligned_cols=34  Identities=15%  Similarity=0.148  Sum_probs=22.4

Q ss_pred             hhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccc
Q psy13210         46 DRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSY   92 (155)
Q Consensus        46 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~   92 (155)
                      +.|+.|+..|.-..+             ..........|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~-------------~~~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDS-------------QLGANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHH-------------HcCCCCCEEECCCCCCEEE
Confidence            468889888876544             2222223578999998774

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=89.95  E-value=0.15  Score=25.60  Aligned_cols=34  Identities=12%  Similarity=0.093  Sum_probs=23.9

Q ss_pred             hhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccc
Q psy13210         46 DRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSY   92 (155)
Q Consensus        46 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~   92 (155)
                      ..|+.|+..|.-..+             +........+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~-------------~l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDD-------------KLPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHH-------------HcccCCcEEECCCCCcEee
Confidence            358888888876543             3444556778999998874

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=89.84  E-value=0.19  Score=34.25  Aligned_cols=26  Identities=31%  Similarity=0.793  Sum_probs=20.6

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcc
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQ  134 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k  134 (155)
                      .+.|.|++||.++                              .|+.|-+||+||-
T Consensus       132 ~~~~vC~vCGy~~------------------------------~ge~P~~CPiCga  157 (166)
T COG1592         132 GKVWVCPVCGYTH------------------------------EGEAPEVCPICGA  157 (166)
T ss_pred             CCEEEcCCCCCcc------------------------------cCCCCCcCCCCCC
Confidence            3479999999853                              2677899999994

>smart00614 ZnF_BED BED zinc finger

Probab=89.41  E-value=0.35  Score=25.92  Aligned_cols=26  Identities=35%  Similarity=0.556  Sum_probs=20.7

Q ss_pred             CeecCcCcccccCc-----hHHHHHHhhhhC
Q psy13210        126 PFKCVVCKQFFATY-----SGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~~C~k~f~~~-----~~L~~H~~~~H~  151 (155)
                      .-.|..|++.++..     +.|.+|++..|.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            35699999988765     799999985554

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG4173|consensus

Probab=89.40  E-value=0.39  Score=33.78  Aligned_cols=90  Identities=17%  Similarity=0.128  Sum_probs=61.1

Q ss_pred             Chhhhhh--hhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         44 SADRLER--LRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        44 ~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ..+-|+.  |...|...-++..|-        .+..+   -.|..|.+.|.+..-|..|+..-.       ....-..+-
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY--------~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~H-------Ds~Fqa~ve  139 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHY--------HTLHG---NSCSFCKRAFPTGHLLDAHILEWH-------DSLFQALVE  139 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhh--------hhccc---chhHHHHHhCCchhhhhHHHHHHH-------HHHHHHHHH
Confidence            4566765  777777666666665        32222   259999999999999998877522       111223334


Q ss_pred             cCCCCeecC--cCcccccCchHHHHHHhhhhC
Q psy13210        122 TGRKPFKCV--VCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       122 ~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .|..-|.|-  .|+..|.+.-....|+-..|.
T Consensus       140 RG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  140 RGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             cCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            455568895  499999999999888876664

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=88.63  E-value=0.32  Score=31.87  Aligned_cols=23  Identities=39%  Similarity=0.723  Sum_probs=15.2

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      ...|-+||+.|..   |.+|++.+|+
T Consensus        72 ~i~clecGk~~k~---LkrHL~~~~g   94 (132)
T PF05443_consen   72 YIICLECGKKFKT---LKRHLRTHHG   94 (132)
T ss_dssp             -EE-TBT--EESB---HHHHHHHTT-
T ss_pred             eeEEccCCcccch---HHHHHHHccC
Confidence            4789999999988   6999995545

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=87.33  E-value=0.26  Score=25.98  Aligned_cols=30  Identities=13%  Similarity=0.254  Sum_probs=20.3

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccc
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSY   92 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~   92 (155)
                      .|+|..||..+....                  ......|+.||..+.
T Consensus         3 ~y~C~~CG~~~~~~~------------------~~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDE------------------YGTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECC------------------CCCceECCCCCCeEE
Confidence            478899998775432                  112578999997654

>KOG2482|consensus

Probab=86.64  E-value=0.53  Score=35.68  Aligned_cols=70  Identities=16%  Similarity=0.399  Sum_probs=48.8

Q ss_pred             ccccccccccccHHHHHHHHhH--hcCCCCcH----------------------HHHHHHHH-hc------------cCC
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRT--HTGEKPYA----------------------HIIRNHYR-KH------------TGR  124 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~----------------------~~l~~H~~-~h------------~~~  124 (155)
                      +.|-.|.+.|+++..|..||+.  |-...|-.                      +.+.+-.. .+            .+.
T Consensus       196 ~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a  275 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDA  275 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCC
Confidence            7899999999999999999986  54433321                      12211000 00            012


Q ss_pred             CC--eecCcCcccccCchHHHHHHhhhhC
Q psy13210        125 KP--FKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       125 ~~--~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .+  ..|-+|.....+...|..|+..+|.
T Consensus       276 ~a~~v~CLfC~~~~en~~~l~eHmk~vHe  304 (423)
T KOG2482|consen  276 EALSVVCLFCTNFYENPVFLFEHMKIVHE  304 (423)
T ss_pred             CccceEEEeeccchhhHHHHHHHHHHHHH
Confidence            23  6899999999999999999998874

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=85.29  E-value=0.57  Score=35.59  Aligned_cols=40  Identities=25%  Similarity=0.486  Sum_probs=23.8

Q ss_pred             HHHHHHHHhccCCCCe----ecCcCcccccCchHHHHHHhhhhC
Q psy13210        112 HIIRNHYRKHTGRKPF----KCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       112 ~~l~~H~~~h~~~~~~----~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      ..|..|......+.-|    .|.+|...|-....|.+|.|..|.
T Consensus       202 ~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE  245 (493)
T COG5236         202 STLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE  245 (493)
T ss_pred             ccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh
Confidence            4455555543322122    377777777777777777775553

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=84.68  E-value=0.44  Score=33.91  Aligned_cols=30  Identities=17%  Similarity=0.461  Sum_probs=23.7

Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ++..|.|+.|+|.|.-..-..+|+...|.+
T Consensus        74 ~~~K~~C~lc~KlFkg~eFV~KHI~nKH~e  103 (214)
T PF04959_consen   74 DEDKWRCPLCGKLFKGPEFVRKHIFNKHPE  103 (214)
T ss_dssp             SSEEEEE-SSS-EESSHHHHHHHHHHH-HH
T ss_pred             cCCEECCCCCCcccCChHHHHHHHhhcCHH
Confidence            455799999999999999999999988864

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=83.66  E-value=0.84  Score=30.48  Aligned_cols=23  Identities=9%  Similarity=0.173  Sum_probs=16.5

Q ss_pred             ccCCCCCcccccccccccccHHH
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGC   96 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~   96 (155)
                      +.-.+...|.|+.|+..|.....
T Consensus        92 ~~e~~~~~Y~Cp~C~~~y~~~ea  114 (147)
T smart00531       92 EDETNNAYYKCPNCQSKYTFLEA  114 (147)
T ss_pred             hcccCCcEEECcCCCCEeeHHHH
Confidence            34455677999999998875543

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=83.20  E-value=1.1  Score=20.62  Aligned_cols=20  Identities=25%  Similarity=0.371  Sum_probs=16.4

Q ss_pred             eecCcCcccccCchHHHHHHh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ..|++|++.+ ....+..|+.
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            4699999998 6678888876

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PHA00626 hypothetical protein

Probab=82.83  E-value=0.56  Score=25.76  Aligned_cols=17  Identities=24%  Similarity=0.634  Sum_probs=13.2

Q ss_pred             CCcccccccccccccHH
Q psy13210         79 RHKFVCYACDYFSYNIG   95 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~   95 (155)
                      ...|+|+.||+.|....
T Consensus        21 snrYkCkdCGY~ft~~~   37 (59)
T PHA00626         21 SDDYVCCDCGYNDSKDA   37 (59)
T ss_pred             CcceEcCCCCCeechhh
Confidence            36799999999886554

>KOG2186|consensus

Probab=82.11  E-value=0.86  Score=33.09  Aligned_cols=48  Identities=10%  Similarity=0.091  Sum_probs=34.4

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhH
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      .|.|..||....- ..+..|+        -..++ .-|.|-.||+.|.. .+...|..-
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~--------srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHM--------SRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhccc-cchHHHH--------HhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            3679999987654 4677787        33333 67899999999988 666666553

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=82.09  E-value=0.19  Score=26.03  Aligned_cols=30  Identities=13%  Similarity=0.176  Sum_probs=20.0

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCccccccccc
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDY   89 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~   89 (155)
                      .|+|..||..|.....              ... ..+..|+.||.
T Consensus         5 ey~C~~Cg~~fe~~~~--------------~~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    5 EYRCEECGHEFEVLQS--------------ISE-DDPVPCPECGS   34 (42)
T ss_pred             EEEeCCCCCEEEEEEE--------------cCC-CCCCcCCCCCC
Confidence            5789999988865422              111 35567999987

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>KOG2482|consensus

Probab=81.90  E-value=3.6  Score=31.37  Aligned_cols=65  Identities=17%  Similarity=0.436  Sum_probs=47.0

Q ss_pred             cccccccccccccH-HHHHHHHhH-hc------CCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210         81 KFVCYACDYFSYNI-GCMRSHIRT-HT------GEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus        81 ~~~C~~C~~~f~~~-~~l~~H~~~-h~------~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ..+|-.|+..+.-. +....|+.. |.      .+-.|...|..|+..-..  .+.|-+|.|.|+.+..|..|||
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~--r~~CLyCekifrdkntLkeHMr  216 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLE--RLRCLYCEKIFRDKNTLKEHMR  216 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHh--hheeeeeccccCCcHHHHHHHH
Confidence            45799999866544 556666654 42      133455778887765333  3899999999999999999998

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=81.73  E-value=0.5  Score=26.30  Aligned_cols=34  Identities=6%  Similarity=0.088  Sum_probs=20.7

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccc
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYF   90 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~   90 (155)
                      -.|.|+.||...-....             +......+|.|+.||..
T Consensus        26 v~F~CPnCGe~~I~Rc~-------------~CRk~g~~Y~Cp~CGF~   59 (61)
T COG2888          26 VKFPCPNCGEVEIYRCA-------------KCRKLGNPYRCPKCGFE   59 (61)
T ss_pred             eEeeCCCCCceeeehhh-------------hHHHcCCceECCCcCcc
Confidence            35778888854433222             22233478999999863

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.54  E-value=1.2  Score=30.16  Aligned_cols=38  Identities=16%  Similarity=0.199  Sum_probs=28.5

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCccccc
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFA  137 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~  137 (155)
                      ....+..-|.|+.|+..|+....+..                          -|.|+.||....
T Consensus       102 ~~e~~~~~Y~Cp~c~~r~tf~eA~~~--------------------------~F~Cp~Cg~~L~  139 (158)
T TIGR00373       102 EFETNNMFFICPNMCVRFTFNEAMEL--------------------------NFTCPRCGAMLD  139 (158)
T ss_pred             hhccCCCeEECCCCCcEeeHHHHHHc--------------------------CCcCCCCCCEee
Confidence            44456677999999999888877641                          299999997543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2071|consensus

Probab=81.04  E-value=0.87  Score=36.96  Aligned_cols=28  Identities=14%  Similarity=0.153  Sum_probs=19.3

Q ss_pred             CCCcccccccccccccHHHHHHHHhHhc
Q psy13210         78 FRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        78 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ...+.+|..||..|.+......||..|.
T Consensus       415 ~~~pnqC~~CG~R~~~~ee~sk~md~H~  442 (579)
T KOG2071|consen  415 KDSPNQCKSCGLRFDDSEERSKHMDIHD  442 (579)
T ss_pred             cCCcchhcccccccccchhhhhHhhhhh
Confidence            3456677778887777776666666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	155
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-07
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		7e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-05
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		7e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-05
2lpe_A	149	Solution Nmr Structure Of The Ksr1 Ca1-Ca1a Domain		1e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-04
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-04

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 13/65 (20%)
Query: 97  MRSHIRTHTGEKPY-------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY 143
           +++H+RTHTGEKPY             +  +  HYRKHTG KPF+C VC + F+      
Sbjct: 33  LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92
Query: 144 QHLRR 148
            H++R
Sbjct: 93  LHMKR 97

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 74  RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHI-----------IRNHYRKHT 122
           RT      + C  C         +R+H RTHTGEKPYA             +R H R HT
Sbjct: 70  RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129
Query: 123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
           G KP+KC  C + F+     + H +RTH  E
Sbjct: 130 GEKPYKCPECGKSFSREDNLHTH-QRTHTGE 159

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 13/65 (20%)
Query: 97  MRSHIRTHTGEKPY-------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY 143
           +++H+RTHTGEKPY             +  +  HYRKHTG +PF+C  C + F+      
Sbjct: 24  LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 83
Query: 144 QHLRR 148
            H++R
Sbjct: 84  LHMKR 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 26/86 (30%)
Query: 85  YACDYFSYNIGC---------MRSHIRTHTGEKPY-------------AHIIRNHYRKHT 122
           + CDY     GC         +++H+RTHTGEKPY             +  +  HYRKHT
Sbjct: 6   HTCDY----AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 123 GRKPFKCVVCKQFFATYSGAYQHLRR 148
           G +PF+C  C + F+       H++R
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKR 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 82  FVCYACDYFSYNIGCMRSHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKCV 130
           + C  C         ++ H RTHTGEKPY           +  ++ H R HTG KP+KC 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 131 VCKQFFATYSGAYQHLRRTH 150
            C + F+      +H +RTH
Sbjct: 65  ECGKSFSRSDHLSRH-QRTH 83

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 86  ACDYFSYNIGCMRSHIRTHTGEKPYAHII--RN---------HYRKHTGRKPFKCVVCKQ 134
           +CD      G +  HIR HTG+KP+   I  RN         H R HTG KPF C +C +
Sbjct: 11  SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 135 FFATYSGAYQHLR 147
            FA      +H +
Sbjct: 71  KFARSDERKRHTK 83

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 82  FVCY--ACDYFSYNIGCMRSHIRTHTGEKPY-------------AHIIRNHYRKHTGRKP 126
           F+C    C+   + +  ++ H R HTGEKPY             +  ++ H R+HTG KP
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 127 FKCVVCKQFFATYSGAYQHLRRTHGQESI 155
           F+C  C++ F+       H R   G++  
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPF 95

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 11/62 (17%)
Query: 97  MRSHIRTHTGEKPYAHII--RN---------HYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
           + +HIR HTG+KP+   I  RN         H R HTG KPF C +C + FAT     +H
Sbjct: 22  LDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATLHTRTRH 81
Query: 146 LR 147
            +
Sbjct: 82  TK 83

>pdb|2LPE|A Chain A, Solution Nmr Structure Of The Ksr1 Ca1-Ca1a Domain Length = 149

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 13/68 (19%)
Query: 24 DGGF-SKLKRALDV---NQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFR 79
          DGG  + + RAL      Q +IDIS   L  LRT+C+ S +LTQ EIRT+E+        
Sbjct: 4  DGGAGAAVSRALQQCGQLQKLIDISIGSLRGLRTKCSVSNDLTQQEIRTLEA-------- 55
Query: 80 HKFVCYAC 87
           K V Y C
Sbjct: 56 -KLVKYIC 62

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 86  ACDYFSYNIGCMRSHIRTHTGEKPYAHII--RN---------HYRKHTGRKPFKCVVCKQ 134
           +CD        + +HIR HTG+KP+   I  RN         H R HTG KPF C +C +
Sbjct: 11  SCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGR 70
Query: 135 FFATYSGAYQHLR 147
            FAT     +H +
Sbjct: 71  KFATLHTRDRHTK 83

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 43  ISADRLERLRTQCATSAELTQHEIRTIESMIRTD-PFRHKFVCY--ACDYFSYNIGC--- 96
           I   +L R +  C  +   T HE+ T  +M     P ++  VCY   C     +      
Sbjct: 19  IDEAQLSRPKKSCDRTFS-TMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77
Query: 97  MRSHIRTHTGEKPY-------------AHIIRNHYRKHTGRKPFKCVV--CKQFFATYSG 141
           + +HIR HTGEKP+             +  ++ H R HTG KPFKC    C + FA  S 
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSD 137
Query: 142 AYQHL 146
             +H+
Sbjct: 138 RKKHM 142

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 86  ACDYFSYNIGCMRSHIRTHTGEKPYAHII--RN---------HYRKHTGRKPFKCVVCKQ 134
           +CD    +   +  HIR HTG+KP+   I  RN         H R HTG KPF C +C +
Sbjct: 11  SCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 135 FFATYSGAYQHLR 147
            FA      +H +
Sbjct: 71  KFARSDERKRHTK 83

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 85  YACDYFSYNIGCMRS-----HIRTHTGEKPYAHII--RN---------HYRKHTGRKPFK 128
           YAC   S +    RS     HIR HTG+KP+   I  RN         H R HTG KPF 
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 129 CVVCKQFFATYSGAYQHLR 147
           C +C + FA      +H +
Sbjct: 65  CDICGRKFARSDERKRHTK 83

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 85  YACDYFSYNIGCMRS-----HIRTHTGEKPYAHII--RN---------HYRKHTGRKPFK 128
           YAC   S +    RS     HIR HTG+KP+   I  RN         H R HTG KPF 
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 129 CVVCKQFFATYSGAYQHLR 147
           C +C + FA      +H +
Sbjct: 65  CDICGRKFARSDERKRHTK 83

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 85  YACDYFSYNIGCMRS-----HIRTHTGEKPYAHII--RN---------HYRKHTGRKPFK 128
           YAC   S +    RS     HIR HTG+KP+   I  RN         H R HTG KPF 
Sbjct: 5   YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 129 CVVCKQFFATYSGAYQHLR 147
           C +C + FA      +H +
Sbjct: 65  CDICGRKFARSDERKRHTK 83

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 85  YACDYFSYNIGCMRS-----HIRTHTGEKPYAHII--RN---------HYRKHTGRKPFK 128
           YAC   S +    RS     HIR HTG+KP+   I  RN         H R HTG KPF 
Sbjct: 4   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 63
Query: 129 CVVCKQFFATYSGAYQHLR 147
           C +C + FA      +H +
Sbjct: 64  CDICGRKFARSDERKRHTK 82

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
Query: 100 HIRTHTGEKPYA-------------HIIRNHYRKHTGRKPFKC--VVCKQFFATYSGAYQ 144
           H+R HTGEKP+                ++ H R HTG KP+ C    C + F+  S   +
Sbjct: 58  HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK 117
Query: 145 HLRRTHGQE 153
           H  RTH  E
Sbjct: 118 HQNRTHSNE 126

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 85  YACDYFSYNIGCMRS-----HIRTHTGEKPYAHII--RN---------HYRKHTGRKPFK 128
           YAC   S +    RS     HIR HTG+KP+   I  RN         H R HTG KPF 
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 129 CVVCKQFFATYSGAYQHLR 147
           C +C + FA      +H +
Sbjct: 65  CDICGRKFARSDERKRHTK 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	155
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-11
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 59.9 bits (146), Expect = 4e-13
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 15/67 (22%)

Query: 98  RSHIRTHTGEKPYA--------------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY 143
           + H  +HT + PY                + R H + H G    K   C     T++   
Sbjct: 20  KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR-HEKVHAGYPCKKDDSCSFVGKTWTLYL 78

Query: 144 QHLRRTH 150
           +H+   H
Sbjct: 79  KHVAECH 85

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.4 bits (137), Expect = 9e-12
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 13/72 (18%)

Query: 95  GCMRSHIRTHTGEKPY-----------AHIIRNHYRKHTG--RKPFKCVVCKQFFATYSG 141
           G   S  RTH+GEKPY           +  ++ H  +        F C  C    A  S 
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 142 AYQHLRRTHGQE 153
              HLR+ H   
Sbjct: 61  LGVHLRKQHSYS 72

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.5 bits (132), Expect = 6e-11
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 15/65 (23%)

Query: 98  RSHIRTHTGEKPYA--------------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY 143
           ++H+RTHTGEKPY                + R HYRKHTG +PF+C  C + F+      
Sbjct: 24  KAHLRTHTGEKPYHCDWDGCGWKFARSDELTR-HYRKHTGHRPFQCQKCDRAFSRSDHLA 82

Query: 144 QHLRR 148
            H++R
Sbjct: 83  LHMKR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.4 bits (132), Expect = 7e-11
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 14/65 (21%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
             HIR HTG+KP+             H+   H R HTG KPF C +C + FA      +H
Sbjct: 23  TRHIRIHTGQKPFQCRICMRNFSRSDHLTT-HIRTHTGEKPFACDICGRKFARSDERKRH 81

Query: 146 LRRTH 150
             + H
Sbjct: 82  -TKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 13/40 (32%)

Query: 98  RSHIRTHTGEKPYA------------HIIRNHYRKHTGRK 125
            +HIRTHTGEKP+A               R H + H  +K
Sbjct: 51  TTHIRTHTGEKPFACDICGRKFARSDERKR-HTKIHLRQK 89

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 56.4 bits (137), Expect = 9e-11
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 15/67 (22%)

Query: 98  RSHIRTHTGEKPY--------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY 143
           + H  +HT + PY              + + R H + H G    K   C     T++   
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR-HEKVHAGYPCKKDDSCSFVGKTWTLYL 181

Query: 144 QHLRRTH 150
           +H+   H
Sbjct: 182 KHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 17/70 (24%)

Query: 98  RSHIRTHTGEKPY--------------AHIIRNHYRKHTGRKPFKC--VVCKQFFATYSG 141
           ++H+  HTGEKP+               H+ R H   HTG K F C    C   F T + 
Sbjct: 31  QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR-HSLTHTGEKNFTCDSDGCDLRFTTKAN 89

Query: 142 AYQHLRRTHG 151
             +H  R H 
Sbjct: 90  MKKHFNRFHN 99

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 18/67 (26%)

Query: 100 HIRTHTGEKPY--------------AHIIRNHYRKHTGRKPFKC--VVCKQFFATYSGAY 143
                   K Y                +   H  KHTG KPF C    C++ F +     
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQA-HLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 144 QHLRRTH 150
           +H   TH
Sbjct: 62  RH-SLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 20/69 (28%)

Query: 100 HIRTHTGEKPY--------------AHIIRNHYRKHTGRK--PFKCVV--CKQFFATYSG 141
           H  THTGEK +              A++ + H+ +    K   + C    C + F  ++ 
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKK-HFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 142 AYQHLRRTH 150
              H + +H
Sbjct: 122 LKVH-QFSH 129

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 22/90 (24%)

Query: 82  FVCYACDY------FSYNIGCMRSHIRTHTGEKPY-------------AHIIRNHYRKHT 122
           FVC+          F      +  H+R HTGEKP+                ++ H R HT
Sbjct: 35  FVCHWGGCSRELRPFK-AQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93

Query: 123 GRKPFKC--VVCKQFFATYSGAYQHLRRTH 150
           G KP+ C    C + F+  S   +H  RTH
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 17/69 (24%)

Query: 98  RSHIRTHTGEKPYA--------------HIIRNHYRKHTGRKPFKCVV--CKQFFATYSG 141
           ++H+R+HTGEKPY                  ++  R H+  KP+ C +  C + +   S 
Sbjct: 86  KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSS 145

Query: 142 AYQHLRRTH 150
             +H+ +T 
Sbjct: 146 LRKHV-KTV 153

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 16/67 (23%)

Query: 98  RSHIRTHTGEKPYA--------------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAY 143
           ++H+RTHTGEKPY                + R HYRKHTG KPF+C VC + F+      
Sbjct: 34  KAHLRTHTGEKPYKCTWEGCDWRFARSDELTR-HYRKHTGAKPFQCGVCNRSFSRSDHLA 92

Query: 144 QHLRRTH 150
            H  + H
Sbjct: 93  LH-MKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 10/65 (15%)

Query: 95  GCMRSHIRTHTGEKPY-------AHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQH 145
           G      R H  + P        +  ++ H R HTG KP+KC    C   FA      +H
Sbjct: 7   GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH 66

Query: 146 LRRTH 150
             R H
Sbjct: 67  -YRKH 70

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 23/86 (26%)

Query: 85  YACDY------FSYNIGCMRSHIRTHTGEKPYA--------------HIIRNHYRKHTGR 124
           + C Y      +      ++ H R HTGEKPY                + R H R+HTG 
Sbjct: 7   FMCAYPGCNKRYFKL-SHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKR-HQRRHTGV 64

Query: 125 KPFKCVVCKQFFATYSGAYQHLRRTH 150
           KPF+C  C++ F+       H  RTH
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTH-TRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 18/62 (29%)

Query: 105 TGEKPY--------------AHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRR 148
           + ++P+              +H+   H RKHTG KP++C    C++ F+      +H +R
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQM-HSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QR 59

Query: 149 TH 150
            H
Sbjct: 60  RH 61

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 52.8 bits (128), Expect = 3e-10
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 14/65 (21%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
           ++H+R HTG KPY            + + + H R H+  +PFKC +C       S    H
Sbjct: 25  KTHMRCHTGVKPYKCKTCDYAAADSSSLNK-HLRIHSDERPFKCQICPYASRNSSQLTVH 83

Query: 146 LRRTH 150
             R+H
Sbjct: 84  -LRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.4 bits (114), Expect = 3e-08
 Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 14/60 (23%)

Query: 103 THTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     P+              +   H R HTG KP+KC  C    A  S   +H  R H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKT-HMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 45.1 bits (108), Expect = 2e-07
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 15/59 (25%)

Query: 84  CYACDY-FSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           C  CDY  + +   +  H+R H+ E+P+            + +   H R HTG      
Sbjct: 39  CKTCDYAAADS-SSLNKHLRIHSDERPFKCQICPYASRNSSQLTV-HLRSHTGDSGPSS 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.7 bits (125), Expect = 8e-10
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 15/65 (23%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTG--RKPFKCVVCKQFFATYSGAYQH 145
           H  +H+GEKPY              +   H R H G   KP+ C  C + F+       H
Sbjct: 26  HKLSHSGEKPYSCPVCGLRFKRKDRMSY-HVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84

Query: 146 LRRTH 150
           +++ H
Sbjct: 85  IKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 14/59 (23%)

Query: 104 HTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
            +G                 H+ R H   H+G KP+ C VC   F        H  R+H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNR-HKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSH 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 14/61 (22%)

Query: 102 RTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRT 149
            + +   P             A +   H R H   +PFKC  C       S   +H+ + 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRI-HERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KK 59

Query: 150 H 150
            
Sbjct: 60  F 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 13/58 (22%)

Query: 84  CYACDYFSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           C  C Y   +   +R H R H  ++P+            +++ + H +K  G      
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSK-HMKKFHGDMSGPS 68

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 53.2 bits (129), Expect = 1e-09
 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 15/73 (20%)

Query: 90  FSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFA 137
           FS +   +  H RTHTGEKPY              + R H R HTG KP+KC  C + F+
Sbjct: 31  FSRS-DHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTR-HQRTHTGEKPYKCPECGKSFS 88

Query: 138 TYSGAYQHLRRTH 150
             +    H +RTH
Sbjct: 89  QRANLRAH-QRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.8 bits (128), Expect = 2e-09
 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 15/73 (20%)

Query: 90  FSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFA 137
           FS     +R+H RTHTGEKPY            AH+   H R HTG KP+KC  C + F+
Sbjct: 87  FSQR-ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA-HQRTHTGEKPYKCPECGKSFS 144

Query: 138 TYSGAYQHLRRTH 150
                + H +RTH
Sbjct: 145 REDNLHTH-QRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.8 bits (128), Expect = 2e-09
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 14/65 (21%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
            +      GEKPY             H+   H R HTG KP+KC  C + F+      +H
Sbjct: 10  VAQAALEPGEKPYACPECGKSFSRSDHLAE-HQRTHTGEKPYKCPECGKSFSDKKDLTRH 68

Query: 146 LRRTH 150
            +RTH
Sbjct: 69  -QRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.4 bits (127), Expect = 2e-09
 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 15/73 (20%)

Query: 90  FSYNIGCMRSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFA 137
           FS     +R+H RTHTGEKPY             ++   H R HTG KP+KC  C + F+
Sbjct: 115 FSQL-AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHT-HQRTHTGEKPYKCPECGKSFS 172

Query: 138 TYSGAYQHLRRTH 150
                  H +RTH
Sbjct: 173 RRDALNVH-QRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 37.8 bits (89), Expect = 4e-04
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 13/41 (31%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKP 126
            +H RTHTGEKPY              +   H R HTG+K 
Sbjct: 150 HTHQRTHTGEKPYKCPECGKSFSRRDALNV-HQRTHTGKKT 189

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 14/65 (21%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
             H      +KPY             ++   H   HTG KP++C +C   F   +    H
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLAS-HKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 146 LRRTH 150
             R H
Sbjct: 65  -TRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.8 bits (89), Expect = 9e-05
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 13/42 (30%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPF 127
            SH   HTGEKPY            A++   H R H+G KP+
Sbjct: 34  ASHKTVHTGEKPYRCNICGAQFNRPANLKT-HTRIHSGEKPY 74

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 14/63 (22%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR 147
               H+GEKPY            + +++ H R HTG KP+KC+ C + F+  SG   H +
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQ-HQRVHTGEKPYKCLECGKAFSQNSGLINH-Q 62

Query: 148 RTH 150
           R H
Sbjct: 63  RIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 13/40 (32%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPF 127
           H R HTGEKPY            + +I  H R HT     
Sbjct: 33  HQRVHTGEKPYKCLECGKAFSQNSGLIN-HQRIHTSGPSS 71

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.5 bits (124), Expect = 4e-09
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 19/114 (16%)

Query: 54  QCATSAELTQH-EIRTIESMIRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPY- 110
             +T  EL  H  +  +    + +   +   C      F      + +HIR HTGEKP+ 
Sbjct: 34  TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK-YKLVNHIRVHTGEKPFP 92

Query: 111 ------------AHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTH 150
                       +  ++ H R HTG KPFKC    C + FA  S   +H    H
Sbjct: 93  CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH-MHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 9/72 (12%), Positives = 14/72 (19%), Gaps = 21/72 (29%)

Query: 99  SHIRTHTGEKPYA-----------HIIRNHYRKHTGRKPFK---------CVVCKQFFAT 138
           S       +               H +  H        P +         C    + F  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 139 YSGAYQHLRRTH 150
                 H+ R H
Sbjct: 75  KYKLVNHI-RVH 85

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 49.4 bits (119), Expect = 7e-09
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 14/66 (21%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR 147
           H RTHT E+PY             H+   H   H+  KPFKC  C + F        H +
Sbjct: 36  HERTHTDERPYTCDICHKAFRRQDHLRD-HRYIHSKEKPFKCQECGKGFCQSRTLAVH-K 93

Query: 148 RTHGQE 153
             H Q 
Sbjct: 94  TLHMQT 99

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 14/63 (22%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR 147
                  +K +             +++  H R HT  +P+ C +C + F        H R
Sbjct: 8   GRLPSKTKKEFICKFCGRHFTKSYNLLI-HERTHTDERPYTCDICHKAFRRQDHLRDH-R 65

Query: 148 RTH 150
             H
Sbjct: 66  YIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 8/44 (18%), Positives = 11/44 (25%), Gaps = 13/44 (29%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           R H   H+ EKP+              +   H   H        
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAV-HKTLHMQTSSPTA 104

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 16/68 (23%)

Query: 98  RSHIRTHTGEKPY-------------AHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGA 142
           + H   HTGEKP+                +R H R HTG +P+ C    C + FA  +  
Sbjct: 51  KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL 110

Query: 143 YQHLRRTH 150
             H   TH
Sbjct: 111 KSH-ILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 15/45 (33%)

Query: 98  RSHIRTHTGEKPY--------------AHIIRNHYRKHTGRKPFK 128
           R+H+R HTG++PY               ++   H   H   K  +
Sbjct: 81  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS-HILTHAKAKNNQ 124

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.2 bits (116), Expect = 1e-08
 Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 14/63 (22%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR 147
                   + Y            + + + H R HTG KP+KC  C + F   S    H  
Sbjct: 9   SEWQQRERRRYKCDECGKSFSHSSDLSK-HRRTHTGEKPYKCDECGKAFIQRSHLIGH-H 66

Query: 148 RTH 150
           R H
Sbjct: 67  RVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.9 bits (97), Expect = 6e-06
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 13/42 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFK 128
            H RTHTGEKPY            +H+I  H+R HTG  P  
Sbjct: 36  KHRRTHTGEKPYKCDECGKAFIQRSHLIG-HHRVHTGSGPSS 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.2 bits (116), Expect = 1e-08
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 14/63 (22%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR 147
           H+  H+  +PY            + + + H   HTG KP KC VC + F+  S    H  
Sbjct: 20  HLLIHSDTRPYPCQYCGKRFHQKSDMKK-HTFIHTGEKPHKCQVCGKAFSQSSNLITH-S 77

Query: 148 RTH 150
           R H
Sbjct: 78  RKH 80

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 13/60 (21%)

Query: 102 RTHTGEKPY-----------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
              +G+K Y           +   R H   H G +P+ C VC + F        H  + H
Sbjct: 3   SGSSGDKLYPCQCGKSFTHKSQRDR-HMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 13/58 (22%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
           H+  H G +PY             H++  H + HTG KP++C +C + F      ++H
Sbjct: 28  HMSMHLGLRPYGCGVCGKKFKMKHHLVG-HMKIHTGIKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.8 bits (102), Expect = 3e-06
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 9/51 (17%)

Query: 100 HIRTHTGEKPY---------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSG 141
           H++ HTG KPY               H    +  K ++    +Q     SG
Sbjct: 56  HMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEASG 106

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.7 bits (112), Expect = 5e-08
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 16/67 (23%)

Query: 98  RSHIRTHTGEKPYA------------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH 145
            +HIRTHTGEKP+A               R H        P      ++  +        
Sbjct: 20  TTHIRTHTGEKPFACDICGRKFARSDERKR-HRDIQHI-LPILEDKVEELLSKNYHLENE 77

Query: 146 LR--RTH 150
           +   +  
Sbjct: 78  VARLKKL 84

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 18/85 (21%)

Query: 82  FVCYACD-YFSYNIGCMRSHIR---THTGEKPY------------AHIIRNHYRKHTGRK 125
           F C  C   +      +  H      +  E+ +              +   H   HTG  
Sbjct: 36  FECPKCGKCYFRK-ENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL-HMVSHTGEM 93

Query: 126 PFKCVVCKQFFATYSGAYQHLRRTH 150
           P+KC  C Q F        H+ + H
Sbjct: 94  PYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 17/68 (25%)

Query: 98  RSHIRTHTGEKPY------------AHIIRNHYRK---HTGRKPFKCVVCKQFFATYSGA 142
           + H R HTGEKP+             +++  H  +   +   + F C VC++ F      
Sbjct: 24  KVHNRKHTGEKPFECPKCGKCYFRKENLLE-HEARNCMNRSEQVFTCSVCQETFRRRMEL 82

Query: 143 YQHLRRTH 150
             H   +H
Sbjct: 83  RLH-MVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 13/58 (22%)

Query: 104 HTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRT 149
            +G                 ++   H RKHTG KPF+C  C + +       +H  R 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKV-HNRKHTGEKPFECPKCGKCYFRKENLLEHEARN 58

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.4 bits (111), Expect = 7e-08
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 18/72 (25%)

Query: 95  GCMRSHIRTHTGEKPY------------AHIIRNHYRKHTG----RKPFKCVVCKQFFAT 138
           G   S  RTHTGEKPY              +   H++++         F C  C + F  
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDM-HFKRYHDPNFVPAAFVCSKCGKTFTR 59

Query: 139 YSGAYQHLRRTH 150
            +   +H     
Sbjct: 60  RNTMARH-ADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 4/51 (7%), Positives = 9/51 (17%), Gaps = 17/51 (33%)

Query: 98  RSHIRTHTGE----KPY------------AHIIRNHYRKHTGRKPFKCVVC 132
             H + +         +              + R H     G    +    
Sbjct: 32  DMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR-HADNCAGPDGVEGENS 81

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 13/64 (20%), Positives = 19/64 (29%), Gaps = 15/64 (23%)

Query: 102 RTHTGEKPY------------AHIIRNHYR--KHTGRKPFKCVVCKQFFATYSGAYQHLR 147
            T  GE  Y            ++  R HY        K + C  C + F        H++
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCR-HYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 148 RTHG 151
             H 
Sbjct: 62  IIHK 65

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEK Y              +++ H R H+G KP   
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLK-HERLHSGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H+ R H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNR-HRRIHTGEKPSGP 43

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 44.2 bits (105), Expect = 2e-07
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 15/45 (33%)

Query: 99  SHIRTHTGEKPYA--------------HIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+A               + R H R H+G KP   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSR-HRRSHSGVKPSGP 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GE+PY            +H+I  H ++H   K    
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHSHLIE-HLKRHFREKSSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+            +++I  H R HTG KP   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIV-HQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKPY            + +   H R HTG KP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSA-HQRTHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-07
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+            + + R H   HT  KP   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNR-HSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KPFKC +C + F   S   +H    H
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE+P+            AH+I+ H R HTG KP   
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQ-HQRIHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG++PY            + +I  H R HTG KP   
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLIC-HRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
                TG++P++C+ C + F T S    H RR+H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKPY            +H+   H+R HTG KP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTN-HWRIHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   +  GEK Y            +H+   H R HTG KP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQT-HQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
                 G K +KC VC + F+  S    H +R H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +++I+ H + HT +KP   
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIK-HQKIHTKQKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE P+             ++I  H + HTG +P   
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLII-HQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG  PF C  C + F   +    H ++ H
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIH-QKIH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H + HTG +    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRI-HQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KP+KC  C + F   S    H ++ H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +G+KPY             H+ + H R HTG +    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQ-HKRVHTGERSSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY              +   H+  HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYT-HHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KP+KC  C + F      Y H    H
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG+KPY            +H+ R H   HTG KP   
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLAR-HRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H+ R H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLAR-HRGIHTGEKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   +  G  PY              ++  H R HT  KP   
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLV-HQRMHTREKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 5e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H++R H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVR-HRGIHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   +  GEKPY            +++I  H R H+G KP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLII-HMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +      G KP+ C  C + F++ S    H  RTH
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H+ R H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLAR-HRRVHTGGKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKPY            A ++R H R HTG KP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVR-HQRIHTGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 11/42 (26%)

Query: 99  SHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKC 129
           S   +  GEK +           A  +R H   H G KP   
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKP+            +     H R H+G KP   
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYS-HQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     +G KPFKC  C + F T S  Y H +R+H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+            + +   H++ HTG KP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNV-HHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KPFKCV C + F+  S    H  + H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+            + +I  H R HTG  P   
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIV-HQRIHTGENPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKP+             H+   H R HTG KP   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLAS-HLRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + + R H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLAR-HQRIHTGEKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H+   H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLAN-HQRIHTGVKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            A + + H R H+G KP   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQ-HQRVHSGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP             + +I  H R H   K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIM-HQRTHVDDKHSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG KPY            +++I  H R HTG      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLII-HTRTHTGESGPSS 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE PY              +I  H R H G KP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLIS-HQRTHAGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY             H+I+ H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQ-HQRVHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +++ H R H+G KP   
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLK-HQRVHSGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   +  GEKPY              + + H+  HT  KP   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQ-HWITHTREKPSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GE+P+            +H+   H R H+  K    
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAG-HLRLHSREKSSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H+ R H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLAR-HQLIHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY             ++   H + HTG +P   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDM-HQKVHTGERPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKP+            + +   H R HTG KP   
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHS-HQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     +G KPFKC  C + F   S  + H +R H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.0 bits (102), Expect = 8e-07
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 12/52 (23%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKCVVCKQFFAT 138
           S   + +  KPY             H+  +  + HT  +P KC V     ++
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 8e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +   + H R HTG++P   
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQ-HQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KP+KC+ C + F   S   QH +R H
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKPY             H+   H R HTG +P   
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNE-HRRIHTGYRPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +H+++ H+  H+G +P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQ-HHSVHSGERPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +++ R H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSR-HQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KP+KC  C + F   S   +H +R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.5 bits (101), Expect = 8e-07
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG KPY            + +I  H R HTG KP   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIV-HQRSHTGVKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+             H+ + H R HTG KP   
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQ-HQRVHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            AH+ + H + HTG KP   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQ-HQKTHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQE-HQRIHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + + EKPY             ++   H R H G K    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDM-HQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     +  KP+KC  C + +        H +R H
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            ++++  H R HTG      
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMV-HQRTHTGESGPSS 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKP+            +H+   H R HTG KP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHS-HQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG KPY            + + R H R HTG KP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLAR-HQRVHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE+PY            +++I+ H + HTG KP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIK-HQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
                TG +P+ C VC + F   S   +H ++ H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE+ Y            + +I  H R HTG KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIM-HQRIHTGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H + HTG +    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHI-HQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG KP+KC  C + F   SG + H +++H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   +  G+K +            + +   H R HTG KP   
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTV-HQRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+              + + H R HTG KP   
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQ-HRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
                TG KPF C+ C + F+ + G  QH RR H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEK Y            + + + H + HTG KP   
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQ-HQKIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+            + +   H R HTG KP   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLAT-HQRIHTGEKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H R HTG  P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHV-HQRIHTGENPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG+KP+             +++  H R HTG K    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVT-HQRIHTGEKSGPS 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKPY              +   H R HTG K    
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDF-HQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 9e-04
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     +G KP+KCV C + +        H +R H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            A++ + H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQ-HQRIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE+ Y            + +   H R H G KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSM-HQRIHRGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG K +            + +   H + HTG KP   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSM-HQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +++   H + HTG KP   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFT-HQKIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            +++   H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTT-HQVIHTGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H   H+G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAI-HQATHSGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG KPY            + +   H   HTG KP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTT-HQVIHTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY              +   H R H+G+KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSV-HQRIHSGKKPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 12/43 (27%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TG+KPY              +IR+    HTG KP   
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +     TG+KP++C+ C + F   +   +H R  H
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            AH+ + H R HT       
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQ-HLRVHTQETLSGP 43

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 11/65 (16%), Positives = 16/65 (24%), Gaps = 14/65 (21%)

Query: 104 HTGEKPYA-----------HIIRNHYRKHT---GRKPFKCVVCKQFFATYSGAYQHLRRT 149
            +G                  +  H RKH        F C  C + F        H  ++
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 150 HGQES 154
           H    
Sbjct: 62  HPALL 66

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 11/42 (26%)

Query: 99  SHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKP+           +  +  H R H    P   
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.9 bits (81), Expect = 6e-04
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
                TG KPF+C  C   F+     ++HL R+H + 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERT 38

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTV-HQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
                TG KP+KC VC + F   S    H +R H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIH 35

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 6/53 (11%), Positives = 15/53 (28%), Gaps = 15/53 (28%)

Query: 98  RSHIR-THTGEKPY-------------AHIIRNHYRKHTGRKPFKCVVC-KQF 135
             H +  H  +K +                ++ H + H+  + + C       
Sbjct: 26  NHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 17/63 (26%)

Query: 104 HTGEKPY-------------AHIIRNHYR-KHTGRKPFKC--VVCKQFFATYSGAYQHLR 147
            +G                    + +H + +H  +K F C    C + F       +H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-M 60

Query: 148 RTH 150
           + H
Sbjct: 61  KLH 63

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H + HTG KP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHV-HQQIHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGEKPY            + +   H   HTG+KP   
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTT-HQAIHTGKKPSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + TGE PY              ++  H + H+G+     
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVS-HQKTHSGQSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEKPY            + +I  H R H G      
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIV-HERTHAGVSGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   + +  K +            +H+ + H R HTG KP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQ-HQRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 13/43 (30%)

Query: 99  SHIRTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
           S   +  GE+ +            ++ I+ H R HTG KP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQ-HRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 8e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           +      G +  +C  C +FF   S   QH RR H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 112 HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
           H+ R HYR HT  KP+ C +C + F       +H ++ H
Sbjct: 17  HLKR-HYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 9/40 (22%), Positives = 11/40 (27%), Gaps = 13/40 (32%)

Query: 102 RTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
              +GE PY              +I  H R H G      
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLIS-HQRTHAGESGPSS 41

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 18/68 (26%)

Query: 99  SHIRTH--TGEKPYA--------------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGA 142
           +++  +     +PYA               + R H R HTG+KPF+C +C + F+     
Sbjct: 7   NNLLNYVVPKMRPYACPVESCDRRFSRSDELTR-HIRIHTGQKPFQCRICMRNFSRSDHL 65

Query: 143 YQHLRRTH 150
             H  RTH
Sbjct: 66  TTH-IRTH 72

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 12/40 (30%), Positives = 14/40 (35%), Gaps = 13/40 (32%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPF 127
              +  GEKPY            AH+   H   HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRA-HVLIHTGSGPS 40

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 13/40 (32%)

Query: 102 RTHTGEKPY------------AHIIRNHYRKHTGRKPFKC 129
              +GEKP+            ++++  H + H   KP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLV-HQQTHAEEKPSGP 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 7e-05
 Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 11/40 (27%)

Query: 99  SHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPF 127
               +  GEKPY              +++H R HTG  P 
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%)

Query: 85  YACDY----FSYNIGCMRSHIRTHTGEKPYA 111
           Y C+     F +    ++SH+R HTG  P +
Sbjct: 12  YPCEICGTRFRHL-QTLKSHLRIHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.2 bits (87), Expect = 8e-05
 Identities = 12/40 (30%), Positives = 14/40 (35%), Gaps = 13/40 (32%)

Query: 100 HIRTHTGEKPY------------AHIIRNHYRKHTGRKPF 127
              +  GEKPY              +I  H R HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIV-HIRVHTGSGPS 40

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 11/42 (26%)

Query: 99  SHIRTHTGEKPY-----------AHIIRNHYRKHTGRKPFKC 129
           S   + +GEK +              +R H R H G K    
Sbjct: 2   SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	155
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.85
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.82
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.75
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.73
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.72
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.72
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.71
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.71
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.7
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.7
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.69
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.69
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.66
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.64
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.64
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.63
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.63
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.62
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.62
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.61
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.56
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.53
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.51
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.5
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.49
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.48
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.48
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.48
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.48
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.46
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.45
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.44
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.43
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.43
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.4
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.4
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.39
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.39
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.38
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.38
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.36
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.31
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.3
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.29
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.29
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.28
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.28
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.27
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.27
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.27
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.26
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.25
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.25
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.24
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.24
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.24
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.24
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.23
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.22
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.21
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.2
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.2
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.16
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.16
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.16
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.16
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.15
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.15
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.13
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.11
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.02
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.02
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.0
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.98
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.97
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.96
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.93
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.92
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.91
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.89
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.89
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.84
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.83
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.8
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.79
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.78
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.77
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.77
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.74
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.74
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.73
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.73
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.73
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.71
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.7
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.69
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.69
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.68
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.67
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.67
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.67
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.65
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.09
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.65
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.65
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.09
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.63
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.61
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.6
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.59
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.59
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.59
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.56
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.56
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.56
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.55
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.55
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.54
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.52
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.92
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.89
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.86
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.45
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.42
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.75
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.35
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.04
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.71
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.65
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.36
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.29
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.8
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.63
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.05
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.74
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.55
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.95
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.64
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	92.59
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.16
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	91.96
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.88
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	90.1
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.24
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.87
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.77
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	87.13
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	86.51
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	85.8
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	83.45
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.24

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.92  E-value=9e-26  Score=155.86  Aligned_cols=139  Identities=26%  Similarity=0.435  Sum_probs=74.1

Q ss_pred             hhhhhcccCCCcchhhhhhcccccccccChhhhhhhhhhccCcHHHhhhHHh--------------------hhhhhhcc
Q psy13210         16 YAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIR--------------------TIESMIRT   75 (155)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~C~~~~~~~~~l~~h~~~--------------------~~~~~~~~   75 (155)
                      +.+.|..++..|.................+|.|+.|++.|.....|..|+..                    .+..|+++
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            3455555555443322222211222223455666666666666666666521                    01112255


Q ss_pred             CCCCCcccccccccccccHHHHHHHHhHhcCCCCcH-----------HHHHHHHHhccCCCCeecCcCcccccCchHHHH
Q psy13210         76 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQ  144 (155)
Q Consensus        76 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-----------~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~  144 (155)
                      |.++++|.|++|++.|.+...|..|+++|.++++|.           ..|..|+++|++++||.|++|++.|.+.+.|..
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  179 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV  179 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHH
Confidence            556666666666666666666666666666666664           678888888888888888888888888888888


Q ss_pred             HHhhhhCCCCC
Q psy13210        145 HLRRTHGQESI  155 (155)
Q Consensus       145 H~~~~H~~~~p  155 (155)
                      |++ .|++++|
T Consensus       180 H~~-~H~~~k~  189 (190)
T 2i13_A          180 HQR-THTGKKT  189 (190)
T ss_dssp             HHT-TC-----
T ss_pred             HHH-hcCCCCC
Confidence            887 6777776

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=1.2e-24  Score=150.14  Aligned_cols=98  Identities=31%  Similarity=0.492  Sum_probs=56.4

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcH----------
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA----------  111 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~----------  111 (155)
                      ...+|.|+.|++.|.....|..|+        ++|.++++|+|+.|++.|.....|..|++.|.++++|.          
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   89 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQ--------RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQ   89 (190)
T ss_dssp             -------------CCSSHHHHHGG--------GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             CCCCCcCCCCccccCCHHHHHHHH--------HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCC
Confidence            346799999999999999999999        88888888888888888888888888888888777764          


Q ss_pred             -HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        112 -HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       112 -~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                       ..|..|+++|.++++|.|++|++.|.+.+.|..|++
T Consensus        90 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A           90 RANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             HHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence             444444444444444444444444444444444444

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=5.2e-24  Score=137.18  Aligned_cols=105  Identities=22%  Similarity=0.345  Sum_probs=97.0

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhH---hcCCCCcH-------
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT---HTGEKPYA-------  111 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~-------  111 (155)
                      ...+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+..   |.++++|.       
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~   75 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHN--------RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQET   75 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHH--------HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCE
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHH--------HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCc
Confidence            346789999999999999999999        899999999999999999999999999986   46677775       


Q ss_pred             ----HHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        112 ----HIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       112 ----~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                          ..|..|+++|.+++||.|++|++.|.+.+.|.+|++..|++++
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           76 FRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             ESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence                8899999999999999999999999999999999988899875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=1.7e-23  Score=135.00  Aligned_cols=102  Identities=25%  Similarity=0.418  Sum_probs=89.6

Q ss_pred             Chhhhh--hhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcH----------
Q psy13210         44 SADRLE--RLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA----------  111 (155)
Q Consensus        44 ~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~----------  111 (155)
                      ..|.|+  .|++.|.+...|..|+        ++| ++++|+|++|++.|.....|..|+++|.++++|.          
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~--------~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   74 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHL--------HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF   74 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHH--------GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEE
T ss_pred             CcccCCCCCCcCccCCHHHHHHHH--------HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCcc
Confidence            457888  8999999999999999        888 7889999999999999999999999999888774          


Q ss_pred             ---HHHHHHHHhccCCCCeecC--cCcccccCchHHHHHHhhhhCCCCC
Q psy13210        112 ---HIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       112 ---~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                         ..|..|+++|.++++|.|+  .|++.|.+.+.|..|++ .|++++|
T Consensus        75 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~H~~~k~  122 (124)
T 1ubd_C           75 SLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-THAKAKN  122 (124)
T ss_dssp             SCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH-HHC----
T ss_pred             CCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHH-HHccccc
Confidence               7899999999999999996  59999999999999999 7888775

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=1e-22  Score=136.20  Aligned_cols=105  Identities=29%  Similarity=0.376  Sum_probs=95.6

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhcc-CCCCCc--------ccccccccccccHHHHHHHHhHhcCCCCcH-
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRT-DPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYA-  111 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-  111 (155)
                      ....+.|..|++.|.+...|..|+        +. |.+..+        |.|++|++.|.....|..|+++|.++++|. 
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~--------~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   93 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHV--------TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC   93 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHH--------HTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEEC
T ss_pred             hhcccccccCCcccCCHHHHHHHH--------HhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccC
Confidence            346789999999999999999999        65 666554        899999999999999999999999988875 


Q ss_pred             ------------HHHHHHHHhccCCCCeecCc--CcccccCchHHHHHHhhhhCCCCC
Q psy13210        112 ------------HIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       112 ------------~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                                  ..|..|+++|++++||.|++  |++.|.+.+.|.+|++ .|++++|
T Consensus        94 ~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~  150 (155)
T 2rpc_A           94 PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKS  150 (155)
T ss_dssp             SCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST-TTTSCCC
T ss_pred             CcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH-HhcCCCC
Confidence                        78999999999999999997  9999999999999999 8888886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=6.1e-23  Score=134.47  Aligned_cols=84  Identities=18%  Similarity=0.318  Sum_probs=69.9

Q ss_pred             cChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhcc
Q psy13210         43 ISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHT  122 (155)
Q Consensus        43 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~  122 (155)
                      ..+|.|+.|++.|.....|..|+        ++|.+++||+|++||+.|.....|..|+++|+                 
T Consensus        20 ek~y~C~~C~k~F~~~~~L~~H~--------~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------   74 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLRRHF--------NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT-----------------   74 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHHHHH--------HHHHCCSCEECSSSSCEESSHHHHHHHHHHHH-----------------
T ss_pred             CcCeECCCCCCCcCCHHHHHHHH--------HHcCCCCCeeCCccCeecccccchhhhccccC-----------------
Confidence            46789999999999999999999        88999999999999999999999988888777                 


Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +++||.|++||+.|.+.+.|..|++++|+
T Consensus        75 ~~k~~~C~~C~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           75 GERRYQCLACGKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             TCCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred             CCccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence            56667777777777777777777774443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=1.7e-22  Score=129.30  Aligned_cols=99  Identities=26%  Similarity=0.449  Sum_probs=92.7

Q ss_pred             cChhhhhh--hhhhccCcHHHhhhHHhhhhhhhccCCCCCccccc--ccccccccHHHHHHHHhHhcCCCCcH-------
Q psy13210         43 ISADRLER--LRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYA-------  111 (155)
Q Consensus        43 ~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~-------  111 (155)
                      ..+|.|..  |++.|.+...|..|+        ++|.++++|+|+  .|++.|.....|..|+++|.++++|.       
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   75 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHS--------RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK   75 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHH--------HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHH--------HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCch
Confidence            45789986  999999999999999        888899999999  79999999999999999999999886       


Q ss_pred             ----HHHHHHHHhccCCCCeec--CcCcccccCchHHHHHHhhhh
Q psy13210        112 ----HIIRNHYRKHTGRKPFKC--VVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       112 ----~~l~~H~~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H  150 (155)
                          ..|..|+++|+++++|.|  +.|++.|.+.+.|.+|++ .|
T Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~H  119 (119)
T 2jp9_A           76 FSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN-MH  119 (119)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH-TC
T ss_pred             hCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh-cC
Confidence                889999999999999999  899999999999999998 54

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=2.8e-21  Score=129.00  Aligned_cols=125  Identities=21%  Similarity=0.316  Sum_probs=96.9

Q ss_pred             hhhcccCCCcchhhhhhcccc---cccccChhhhhh-----hhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccc--c
Q psy13210         18 YEKDAQDGGFSKLKRALDVNQ---SMIDISADRLER-----LRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYA--C   87 (155)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~-----C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~--C   87 (155)
                      +.|..++..|...........   ......+|.|+.     |++.|.....|..|+        ++|.++++|+|++  |
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C   75 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM--------RRHTGEKPHKCTFEGC   75 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT--------HHHHCCCCCCCCSTTC
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHH--------HhcCCCCCccCCCCCC
Confidence            445566665543333322221   233345677653     458899999999999        8888889999985  9


Q ss_pred             ccccccHHHHHHHHhHhcCCCCcH-------------HHHHHHH-HhccCCCCeecCc--CcccccCchHHHHHHhhhh
Q psy13210         88 DYFSYNIGCMRSHIRTHTGEKPYA-------------HIIRNHY-RKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus        88 ~~~f~~~~~l~~H~~~h~~~~~~~-------------~~l~~H~-~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H  150 (155)
                      ++.|.+...|..|+++|.++++|.             ..|..|+ ++|++++||.|++  |++.|.+.+.|..|++.+|
T Consensus        76 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           76 RKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            999999999999999999888775             6789998 7899999999988  9999999999999999544

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.8e-21  Score=118.63  Aligned_cols=87  Identities=25%  Similarity=0.464  Sum_probs=78.8

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ...+|.|..|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|.                
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------   60 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHM--------RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS----------------   60 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHG--------GGCCCCCSEECSSSCCEESSHHHHHHHHHHSC----------------
T ss_pred             CCcCeECCCCCCccCCHHHHHHHH--------HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC----------------
Confidence            346789999999999999999999        99999999999999999999999888877766                


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                       ++++|.|++|++.|.+.+.|..|++ .|.+++
T Consensus        61 -~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   91 (96)
T 2dmd_A           61 -DERPFKCQICPYASRNSSQLTVHLR-SHTGDS   91 (96)
T ss_dssp             -CCCCEECSSSSCEESSHHHHHHHHT-TCCSCC
T ss_pred             -CCCCccCCCCCCccCCHHHHHHHHH-HhcCCC
Confidence             7778999999999999999999999 666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=3e-21  Score=133.05  Aligned_cols=129  Identities=20%  Similarity=0.255  Sum_probs=100.1

Q ss_pred             Hhhhhh--cccCCCcchhhhhhcccccccccChhhh--hhhhhhccCcHHHhhhHHhhhhhhhccCCCCCccccc--ccc
Q psy13210         15 FYAYEK--DAQDGGFSKLKRALDVNQSMIDISADRL--ERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCY--ACD   88 (155)
Q Consensus        15 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~c--~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~--~C~   88 (155)
                      .+.+.|  ..++..|.................+|.|  +.|++.|.+...|..|+        ++|.++++|.|+  .|+
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C~   81 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS--------LTHTGEKNFTCDSDGCD   81 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH--------TTTTTCCCEECCSSSCC
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH--------HHccCCCceeCCCCCCC
Confidence            345566  4566655433322222222334567889  88999999999999999        999999999999  899


Q ss_pred             cccccHHHHHHHH-hHh-cCCCCcH-------------HHHHHHHHhccCCCCeecCc--CcccccCchHHHHHHhhhhC
Q psy13210         89 YFSYNIGCMRSHI-RTH-TGEKPYA-------------HIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        89 ~~f~~~~~l~~H~-~~h-~~~~~~~-------------~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +.|.+...|..|+ +.| .++++|.             ..|..|+++|++++||.|++  |++.|.+.+.|..|++ .|+
T Consensus        82 ~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~  160 (190)
T 1tf6_A           82 LRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHA  160 (190)
T ss_dssp             CEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT-SSC
T ss_pred             CccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHH-HhC
Confidence            9999999999998 567 3555552             78999999999999999988  9999999999999999 666


Q ss_pred             C
Q psy13210        152 Q  152 (155)
Q Consensus       152 ~  152 (155)
                      +
T Consensus       161 ~  161 (190)
T 1tf6_A          161 G  161 (190)
T ss_dssp             S
T ss_pred             C
Confidence            5

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=3.8e-21  Score=108.90  Aligned_cols=59  Identities=25%  Similarity=0.504  Sum_probs=53.7

Q ss_pred             CCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210         78 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        78 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +|+||+|++||+.|.....|..|+++|+                 |++||.|++||+.|.+.+.|.+|++ .|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht-----------------~ekp~~C~~C~k~F~~~~~L~~H~~-~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHL-----------------GYRPRSCPECGKCFRDQSEVNRHLK-VHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHH-----------------TCCCEECTTTCCEESSHHHHHHHGG-GGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhC-----------------CCcCeECCCCCCCcCCHHHHHHHhC-ccCCCC
Confidence            4799999999999999999998888777                 7888999999999999999999999 899874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=1.7e-21  Score=130.02  Aligned_cols=103  Identities=30%  Similarity=0.443  Sum_probs=94.0

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhc---cCCCCCccccccc-----ccccccHHHHHHHHhHhcCCCCcH-----
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIR---TDPFRHKFVCYAC-----DYFSYNIGCMRSHIRTHTGEKPYA-----  111 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~---~~~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~~~~-----  111 (155)
                      .++|+.|++.|.+...|..|+        +   +|.++++|+|++|     ++.|.....|..|+++|.++++|.     
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~--------~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   74 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHI--------NSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG   74 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHH--------HHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTT
T ss_pred             cCCcCCCccccCCHHHHHHHH--------HhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCC
Confidence            578999999999999999999        6   7888999998753     499999999999999999988875     


Q ss_pred             --------HHHHHHHHhccCCCCeecCc--CcccccCchHHHHHHhhhhCCCCC
Q psy13210        112 --------HIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       112 --------~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                              ..|..|+++|++++||.|++  |++.|.+.+.|..|++..|++++|
T Consensus        75 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~  128 (155)
T 2gli_A           75 CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP  128 (155)
T ss_dssp             CCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC
T ss_pred             CCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence                    78999999999999999998  999999999999999548998876

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=3.6e-21  Score=120.82  Aligned_cols=88  Identities=25%  Similarity=0.278  Sum_probs=80.5

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ...+|.|..|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|.                
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------   69 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHE--------RTHTDERPYTCDICHKAFRRQDHLRDHRYIHS----------------   69 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHH--------HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSC----------------
T ss_pred             CCcCeECCCCCCccCCHHHHHHHH--------HHcCCCCCcCCCCccchhCCHHHHHHHHHHhC----------------
Confidence            346789999999999999999999        89999999999999999999999998887776                


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                       ++++|.|++|++.|.+...|..|++ .|.+++|
T Consensus        70 -~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~  101 (106)
T 2ee8_A           70 -KEKPFKCQECGKGFCQSRTLAVHKT-LHMQTSS  101 (106)
T ss_dssp             -CCCTTSCSSSCCCCSSHHHHHHHHH-HTTSCCC
T ss_pred             -CCCCeECCCcCCcccCHHHHHHHHH-HhCCCCC
Confidence             7778999999999999999999999 7888776

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.1e-20  Score=116.28  Aligned_cols=90  Identities=21%  Similarity=0.317  Sum_probs=80.4

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ...+|.|..|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|++.|.++              
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------   61 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHK--------LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS--------------   61 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHH--------HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC--------------
T ss_pred             CCCCeECCCCCCccCChHHHHHHH--------HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC--------------
Confidence            346789999999999999999999        9999999999999999999999999998888732              


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                       .+++|.|++|++.|.+.+.|..|++..|+++.
T Consensus        62 -~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           62 -VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             -CCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             -CCCceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence             12789999999999999999999977898763

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.83  E-value=4.1e-21  Score=117.02  Aligned_cols=86  Identities=28%  Similarity=0.420  Sum_probs=76.1

Q ss_pred             Chhhhh--hhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         44 SADRLE--RLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        44 ~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      .+|.|.  .|++.|.....|..|+        ++|.++++|.|+.|++.|.....|..|+++|.                
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------   58 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHI--------RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT----------------   58 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHH--------HHHHCCCCEECTTTCCEESCHHHHHHHHHHHH----------------
T ss_pred             CceECCCCCCCCccCCHHHHHHHH--------HHhCCCCCccCCCCCcccCCHHHHHHHHHHcC----------------
Confidence            468897  6999999999999999        88889999999999999999999988888776                


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                       +++||.|++|++.|.+.+.|..|++ .|+++++
T Consensus        59 -~~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~k~   90 (90)
T 1a1h_A           59 -GEKPFACDICGRKFARSDERKRHTK-IHLRQKD   90 (90)
T ss_dssp             -CCCCEECTTTCCEESSHHHHHHHHG-GGGC---
T ss_pred             -CCCCccCCCCCchhCCHHHHHHHHH-HhcccCC
Confidence             7778999999999999999999999 7888764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.82  E-value=5e-21  Score=114.64  Aligned_cols=82  Identities=26%  Similarity=0.342  Sum_probs=74.7

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCC
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGR  124 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~  124 (155)
                      +|.|+.|++.|.....|..|+        ++|.++++|+|+.|++.|.....|..|+++|.                 ++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~   55 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL--------LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT-----------------GE   55 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH--------HHHHTCCCEECSSSCCEESSHHHHHHHHHHHH-----------------TC
T ss_pred             CccCCCCcccccCchhHHHHH--------HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc-----------------CC
Confidence            378999999999999999999        88889999999999999999999998888776                 77


Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ++|.|++|++.|.+.+.|..|++ .|+|
T Consensus        56 ~~~~C~~C~~~f~~~~~l~~H~~-~H~g   82 (82)
T 2kmk_A           56 KPHKCQVCGKAFSQSSNLITHSR-KHTG   82 (82)
T ss_dssp             CCEECTTTSCEESSHHHHHHHHH-HHC-
T ss_pred             CCCcCCCcchhhCChHHHHHHHH-hhCC
Confidence            78999999999999999999999 6654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.82  E-value=1.5e-20  Score=129.64  Aligned_cols=106  Identities=20%  Similarity=0.250  Sum_probs=95.6

Q ss_pred             cccChhhh--hhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccc--cccccccccHHHHHHHHhHhcCCCCcH-----
Q psy13210         41 IDISADRL--ERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVC--YACDYFSYNIGCMRSHIRTHTGEKPYA-----  111 (155)
Q Consensus        41 ~~~~~~~c--~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~-----  111 (155)
                      .....|.|  +.|++.|.....|..|+        ++|.++++|+|  +.|++.|.....|..|+++|.++++|.     
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~--------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   79 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHL--------CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG   79 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHH--------HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSS
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHH--------HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCC
Confidence            34467889  78999999999999999        88999999999  889999999999999999999988874     


Q ss_pred             --------HHHHHHH-Hhc-cCCCCeec--CcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        112 --------HIIRNHY-RKH-TGRKPFKC--VVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       112 --------~~l~~H~-~~h-~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                              ..|..|+ +.| .++++|.|  +.|++.|.+.+.|..|++ .|++++|
T Consensus        80 C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~  134 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLP  134 (190)
T ss_dssp             CCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCS
T ss_pred             CCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCC
Confidence                    7899999 678 57899999  899999999999999999 7888876

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=3.9e-20  Score=116.44  Aligned_cols=86  Identities=19%  Similarity=0.298  Sum_probs=75.0

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ...+|.|..|++.|.....|..|+        ++|  .++|+|++|++.|.....|..|+. |.                
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~--------~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~----------------   65 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHE--------RLC--RNAAVCPYCSLRFFSPELKQEHES-KC----------------   65 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHH--------HHH--HHSBCCTTTCCCBSSHHHHHHHHH-HC----------------
T ss_pred             CCcCeECCCCCCccCCHHHHHHHH--------HHC--CCCccCCCCCCccCCHHHHHHHHH-cC----------------
Confidence            346789999999999999999998        666  368999999999999998888874 66                


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                       +++||.|++|++.|.+.+.|.+|++.+|++++|
T Consensus        66 -~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           66 -EYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             -STGGGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             -CCCCccCccccchhCCHHHHHHHHHHHcCCCCC
Confidence             778899999999999999999999878998876

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.6e-19  Score=113.06  Aligned_cols=84  Identities=15%  Similarity=0.226  Sum_probs=75.0

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ...+|.| .|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|.                
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------   61 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHM--------SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT----------------   61 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHH--------HHHSCCCSEECTTTSCEESSSHHHHHHHTTTC----------------
T ss_pred             CCCCEec-cCCCccCCHHHHHHHH--------HHcCCCcCccCCCCCcccCCHHHHHHHHHHcC----------------
Confidence            4467899 8999999999999999        88889999999999999999999888887776                


Q ss_pred             cCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                       ++++|.|++|++.|.+.+.|.+|++.+|.
T Consensus        62 -~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           62 -GIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             -CCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             -CCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence             77789999999999999999999995543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=8.1e-19  Score=106.52  Aligned_cols=81  Identities=23%  Similarity=0.462  Sum_probs=74.7

Q ss_pred             Chhhhhh--hhhhccCcHHHhhhHHhhhhhhhccCCCCCccccc--ccccccccHHHHHHHHhHhcCCCCcHHHHHHHHH
Q psy13210         44 SADRLER--LRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYR  119 (155)
Q Consensus        44 ~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~  119 (155)
                      ..+.|+.  |++.|.....|..|+        ++|.++++|+|+  .|++.|.....|..|+++|.              
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--------------   61 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHL--------RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT--------------   61 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH--------TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH--------------
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHH--------HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC--------------
Confidence            5688988  999999999999999        999999999997  59999999999998888776              


Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhh
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                         +++||.|++|++.|.+.+.|..|++ .|
T Consensus        62 ---~~~~~~C~~C~~~f~~~~~l~~H~~-~H   88 (89)
T 2wbs_A           62 ---GHRPFQCQKCDRAFSRSDHLALHMK-RH   88 (89)
T ss_dssp             ---CCCCEECSSSSCEESSHHHHHHHGG-GG
T ss_pred             ---CCCCccCCCCCcccCCHHHHHHHHH-hh
Confidence               7778999999999999999999999 66

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=3.7e-20  Score=117.85  Aligned_cols=85  Identities=18%  Similarity=0.118  Sum_probs=58.5

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhcc--CCCCCcc-ccccccccc--ccHHHHHHHHhHhcCCCCcHHHHHHHH
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRT--DPFRHKF-VCYACDYFS--YNIGCMRSHIRTHTGEKPYAHIIRNHY  118 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~--~~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~~~l~~H~  118 (155)
                      .+|.|+.|++.|.....|..|+        ++  |...+++ +|++|++.|  .....|..|++                
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~--------~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~----------------   73 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHM--------NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG----------------   73 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHH--------HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC----------------
T ss_pred             CCEECCccCchhcCHHHHHHHH--------HHhCccccCCCccCCCCCcccccccHHHHHHHhh----------------
Confidence            4566666666666666666666        44  4444433 366666666  55555555544                


Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                       +|++++||.|++|++.|.+.+.|.+|++.+|..+
T Consensus        74 -~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           74 -KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             -SCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             -ccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence             5558889999999999999999999999666543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.75  E-value=1.8e-18  Score=107.17  Aligned_cols=85  Identities=26%  Similarity=0.444  Sum_probs=75.8

Q ss_pred             ccChhhhhh--hhhhccCcHHHhhhHHhhhhhhhccCCCCCccccc--ccccccccHHHHHHHHhHhcCCCCcHHHHHHH
Q psy13210         42 DISADRLER--LRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNH  117 (155)
Q Consensus        42 ~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H  117 (155)
                      ....+.|..  |++.|.....|..|+        ++|.++++|+|+  .|++.|.....|..|+++|.            
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~------------   71 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHL--------RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT------------   71 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHH--------HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT------------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHH--------HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC------------
Confidence            345688986  999999999999999        899999999996  59999999999988887776            


Q ss_pred             HHhccCCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        118 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                           +++||.|++|++.|.+.+.|..|++ .|.+
T Consensus        72 -----~~~~~~C~~C~~~f~~~~~l~~H~~-~H~~  100 (100)
T 2ebt_A           72 -----GAKPFQCGVCNRSFSRSDHLALHMK-RHQN  100 (100)
T ss_dssp             -----SCCSCBCSSSCCBCSSHHHHHHHHH-HHCC
T ss_pred             -----CCCCeECCCCcCccCCHHHHHHHHH-HhCC
Confidence                 7778999999999999999999999 6653

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=5.2e-18  Score=102.47  Aligned_cols=64  Identities=20%  Similarity=0.379  Sum_probs=56.8

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ..+...++|+|++||+.|.....|.+|+++|+                 +++||.|++|++.|.+.+.|.+|++..|++|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-----------------~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLH-----------------AAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTS-----------------CSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhcc-----------------CCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            55667888999999999999999988888776                 7888999999999999999999987789877


Q ss_pred             C
Q psy13210        154 S  154 (155)
Q Consensus       154 ~  154 (155)
                      .
T Consensus        84 ~   84 (85)
T 2lv2_A           84 N   84 (85)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.72  E-value=1.2e-17  Score=106.51  Aligned_cols=78  Identities=36%  Similarity=0.711  Sum_probs=71.9

Q ss_pred             CCCCcccccc--cccccccHHHHHHHHhHhcCCCCcH-------------HHHHHHHHhccCCCCeecCcCcccccCchH
Q psy13210         77 PFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYA-------------HIIRNHYRKHTGRKPFKCVVCKQFFATYSG  141 (155)
Q Consensus        77 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~-------------~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~  141 (155)
                      .++++|+|++  |++.|.+...|..|+++|.++++|.             ..|..|+++|.++++|.|++|++.|.+.+.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4678999997  9999999999999999999988774             789999999999999999999999999999


Q ss_pred             HHHHHhhhhCCCCC
Q psy13210        142 AYQHLRRTHGQESI  155 (155)
Q Consensus       142 L~~H~~~~H~~~~p  155 (155)
                      |..|++ .|.+++|
T Consensus        82 l~~H~~-~h~~~~~   94 (119)
T 2jp9_A           82 LKTHTR-THTGEKP   94 (119)
T ss_dssp             HHHHHH-HHHTCCC
T ss_pred             HHHHHH-HhcCCCC
Confidence            999999 7877765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.8e-18  Score=100.67  Aligned_cols=67  Identities=30%  Similarity=0.440  Sum_probs=60.2

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHh-HhcCCCCcHHHHHHHHHhccC-CCCeecCcCcccccCchHHHHHHhhh
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYAHIIRNHYRKHTG-RKPFKCVVCKQFFATYSGAYQHLRRT  149 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~l~~H~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~~  149 (155)
                      |+++|.+++||+|++|++.|.....|..|++ .|.                 + +++|.|++|++.|.+.+.|..|++.+
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~-----------------~~~~~~~C~~C~~~f~~~~~L~~H~~~~   68 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT-----------------ENVAKFHCPHCDTVIARKSDLGVHLRKQ   68 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS-----------------SSCSSEECSSSSCEESSHHHHHHHHHHT
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcC-----------------CCCCccCCCCCCCccCCHHHHHHHHHHh
Confidence            3399999999999999999999999999986 455                 4 37899999999999999999999988


Q ss_pred             hCCCCC
Q psy13210        150 HGQESI  155 (155)
Q Consensus       150 H~~~~p  155 (155)
                      |+.+.|
T Consensus        69 H~~~~p   74 (77)
T 2ct1_A           69 HSYSGP   74 (77)
T ss_dssp             SCCSCC
T ss_pred             CCCCCC
Confidence            998876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.71  E-value=2.5e-17  Score=96.82  Aligned_cols=64  Identities=27%  Similarity=0.472  Sum_probs=56.4

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ..+.++++|+|+.|++.|.....|..|+++|.                 ++++|.|++|++.|.+.+.|.+|++ .|+++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-----------------~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~   71 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHT-----------------GEKPYRCNICGAQFNRPANLKTHTR-IHSGE   71 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHC-----------------CCCSEECTTTCCEESCHHHHHHHHH-HHCCS
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcC-----------------CCCCEECCCCCchhCCHHHHHHHHH-hcCCC
Confidence            45677899999999999999999888887776                 7778999999999999999999999 88888


Q ss_pred             CC
Q psy13210        154 SI  155 (155)
Q Consensus       154 ~p  155 (155)
                      +|
T Consensus        72 kp   73 (74)
T 2lce_A           72 KP   73 (74)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.71  E-value=5.4e-19  Score=107.42  Aligned_cols=82  Identities=15%  Similarity=0.083  Sum_probs=75.3

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccC
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTG  123 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~  123 (155)
                      .+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|.                 +
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~--------~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-----------------~   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHI--------RTHTGEKPFACDICGRKFARSDERKRHRDIQH-----------------I   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH--------HHHHCCCCEECTTTCCEESSHHHHHHHHHHHT-----------------H
T ss_pred             CCCcCCCCCCccCCHHHHHHHH--------HHcCCCCCccCCCCCCccCCHHHHHHHHHHhC-----------------C
Confidence            4689999999999999999999        88999999999999999999999999988875                 1


Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                       .+|.|+.|++.|.+...|..|++..|.
T Consensus        57 -~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           57 -LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence             469999999999999999999997775

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.70  E-value=3e-18  Score=112.07  Aligned_cols=105  Identities=15%  Similarity=0.109  Sum_probs=84.6

Q ss_pred             hhhhhcccCCCcchhhhhhcccccccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHH
Q psy13210         16 YAYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIG   95 (155)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~   95 (155)
                      +.|.|..++..|............-....+|.|+.|++.|.....|..|+        ++|.+++||+|++||+.|....
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~--------~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE--------IHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHH--------HHHHTCCCEEESSSCCEESSHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhc--------cccCCCccccCCCCCCCcCCHH
Confidence            45778888777644333332222234457899999999999999999999        9999999999999999999999


Q ss_pred             HHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCc
Q psy13210         96 CMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATY  139 (155)
Q Consensus        96 ~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~  139 (155)
                      .|..|+++|.+++|+           ...++|.|.+|++.|...
T Consensus        93 ~L~~H~~~hh~~~p~-----------~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPS-----------GDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHTCCCTT-----------SSSCCEEECCCCSSCCCC
T ss_pred             HHHHHhHHhcCCCCC-----------CCCCCeecCCCCchhhhc
Confidence            999999999887764           246789999999988754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=3.2e-18  Score=106.17  Aligned_cols=75  Identities=17%  Similarity=0.329  Sum_probs=64.7

Q ss_pred             ccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccc-cHHHHHHHHhHhcCCCCcHHHHHHHHHhccC-CCCeecCcC
Q psy13210         55 CATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSY-NIGCMRSHIRTHTGEKPYAHIIRNHYRKHTG-RKPFKCVVC  132 (155)
Q Consensus        55 ~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~-~~~~~C~~C  132 (155)
                      +.....+..|+        ++|.++++|+|++|++.|. ....|..|+++|.                 + ++||.|++|
T Consensus         6 ~~~~~~~~~h~--------~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~-----------------~~~~~~~C~~C   60 (98)
T 2gqj_A            6 SGPGGPEEQWQ--------RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ-----------------KLQDALKCQHC   60 (98)
T ss_dssp             CCCCCSCSHHH--------HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH-----------------HHHHHHSCSSS
T ss_pred             CCCCCcHHHHH--------HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc-----------------CCCCCEECCCC
Confidence            34445566777        9999999999999999999 9999999988876                 4 678999999


Q ss_pred             cccccCchHHHHHHhhhhCCCCC
Q psy13210        133 KQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       133 ~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ++.|.+.+.|.+|++ .|.+++|
T Consensus        61 ~k~F~~~~~L~~H~~-~h~~~kp   82 (98)
T 2gqj_A           61 RKQFKSKAGLNYHTM-AEHSAKP   82 (98)
T ss_dssp             CCCCSCHHHHHHHHH-HHSCSCS
T ss_pred             CCccCCHHHHHHHHH-HHcCCCC
Confidence            999999999999999 6777765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=4.1e-18  Score=96.29  Aligned_cols=58  Identities=12%  Similarity=0.116  Sum_probs=54.6

Q ss_pred             cChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         43 ISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        43 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ..+|.|+.|++.|...+.|..|+        ++|++++||+|++||+.|...++|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~--------~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR--------RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH--------HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH--------HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            36799999999999999999999        99999999999999999999999999999999864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.8e-17  Score=95.56  Aligned_cols=64  Identities=23%  Similarity=0.401  Sum_probs=55.8

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ..+.++++|+|++|++.|.....|..|+++|.                 ++++|.|++|++.|.+.+.|.+|++ .|.++
T Consensus         2 ss~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~   63 (70)
T 1x5w_A            2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHC-----------------TDRPFKCNYCSFDTKQPSNLSKHMK-KFHGD   63 (70)
T ss_dssp             CSCCCCCSEECSSSSCEESSHHHHHHHHGGGC-----------------CSCSEECSSSSCEESSHHHHHHHHH-HHHSS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------------CCCCEeCCCCCCccCCHHHHHHHHH-HHhCC
Confidence            35778899999999999999999888887776                 7778999999999999999999999 66666


Q ss_pred             CC
Q psy13210        154 SI  155 (155)
Q Consensus       154 ~p  155 (155)
                      +|
T Consensus        64 ~p   65 (70)
T 1x5w_A           64 MS   65 (70)
T ss_dssp             SC
T ss_pred             CC
Confidence            65

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=7.4e-17  Score=103.43  Aligned_cols=78  Identities=24%  Similarity=0.407  Sum_probs=71.7

Q ss_pred             CCCCcccccccccccccHHHHHHHHhHhcCCCCcH-----------HHHHHHHHh---ccCCCCeecCcCcccccCchHH
Q psy13210         77 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRK---HTGRKPFKCVVCKQFFATYSGA  142 (155)
Q Consensus        77 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-----------~~l~~H~~~---h~~~~~~~C~~C~k~f~~~~~L  142 (155)
                      .++++|+|++|++.|.....|..|+++|.++++|.           ..|..|+..   |.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            46789999999999999999999999999999886           789999985   6889999999999999999999


Q ss_pred             HHHHhhhhCCCCC
Q psy13210        143 YQHLRRTHGQESI  155 (155)
Q Consensus       143 ~~H~~~~H~~~~p  155 (155)
                      ..|++ .|.+++|
T Consensus        83 ~~H~~-~h~~~~~   94 (124)
T 2dlq_A           83 RLHMV-SHTGEMP   94 (124)
T ss_dssp             HHHHH-HHSSSCS
T ss_pred             HHHHH-HcCCCCC
Confidence            99999 7888775

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.69  E-value=1.3e-17  Score=100.17  Aligned_cols=78  Identities=18%  Similarity=0.284  Sum_probs=71.6

Q ss_pred             hhhh--hhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccc--cccccccHHHHHHHHhHhcCCCCcHHHHHHHHHh
Q psy13210         45 ADRL--ERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRK  120 (155)
Q Consensus        45 ~~~c--~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~  120 (155)
                      +|.|  +.|++.|.....|..|+        ++|.++++|+|++  |++.|.....|..|+++|+               
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~---------------   57 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ--------FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA---------------   57 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH--------HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH---------------
T ss_pred             CccCCCCCCCcccCCHHHHHHHH--------HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC---------------
Confidence            3678  99999999999999999        8899999999998  9999999999999988887               


Q ss_pred             ccCCCCeecCc---CcccccCchHHHHHHhhhh
Q psy13210        121 HTGRKPFKCVV---CKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       121 h~~~~~~~C~~---C~k~f~~~~~L~~H~~~~H  150 (155)
                        +   |.|++   |++.|.+.+.|..|++.+|
T Consensus        58 --~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           58 --G---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             --S---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             --C---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence              4   99999   9999999999999999543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=3.8e-17  Score=96.94  Aligned_cols=67  Identities=16%  Similarity=0.311  Sum_probs=58.8

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +|.++++|+|++|++.|.....|..|+++|.++              .++++|.|++|++.|.+.+.|.+|++..|.+++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~--------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAET--------------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHH--------------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc--------------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            477899999999999999999999998888731              137789999999999999999999977999877


Q ss_pred             C
Q psy13210        155 I  155 (155)
Q Consensus       155 p  155 (155)
                      |
T Consensus        67 ~   67 (78)
T 2d9h_A           67 L   67 (78)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.8e-17  Score=95.10  Aligned_cols=62  Identities=29%  Similarity=0.535  Sum_probs=56.1

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ++|.++++|+|++|++.|.....|..|+++|.                 +++||.|++|++.|.+...|.+|++ .|.++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT-----------------GEKPYKCLECGKAFSQNSGLINHQR-IHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG-----------------CSCCEECSSSCCEESSHHHHHHHHH-HHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC-----------------CCCCeECCCCCcccCCHHHHHHHHH-hcCCC
Confidence            78999999999999999999999998888776                 7778999999999999999999999 56554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.1e-16  Score=94.71  Aligned_cols=64  Identities=30%  Similarity=0.473  Sum_probs=53.5

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ..+.++++|+|++|++.|.....|..|+++|.                 +++||.|++|++.|.+.+.|.+|++ .|.++
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~   72 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHT-----------------GEKPYKCDECGKAFIQRSHLIGHHR-VHTGS   72 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC-----------------CSCSEECSSSCCEESSHHHHHHHGG-GSCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcC-----------------CCcCeeCCCCCCccCCHHHHHHHHH-HhCCC
Confidence            44567788999999999998888888877666                 6778999999999999999999998 78888


Q ss_pred             CC
Q psy13210        154 SI  155 (155)
Q Consensus       154 ~p  155 (155)
                      +|
T Consensus        73 ~p   74 (77)
T 2cot_A           73 GP   74 (77)
T ss_dssp             CC
T ss_pred             CC
Confidence            76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=5.1e-17  Score=96.44  Aligned_cols=70  Identities=13%  Similarity=0.213  Sum_probs=62.9

Q ss_pred             cChhhhhh--hhhhccCcHHHhhhHHhhhhhhhc-cCCCCCcccccc--cccccccHHHHHHHHhHhcCCCCcHHHHHHH
Q psy13210         43 ISADRLER--LRTQCATSAELTQHEIRTIESMIR-TDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYAHIIRNH  117 (155)
Q Consensus        43 ~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~-~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H  117 (155)
                      ..+|.|..  |++.|.....|..|+        + .|.++++|+|++  |++.|.....|..|+++|+            
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~--------~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~------------   64 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHK--------KYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS------------   64 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHH--------HHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH------------
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHH--------HHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC------------
Confidence            35677876  999999999999999        7 799999999999  9999999999998888777            


Q ss_pred             HHhccCCCCeecCcCccccc
Q psy13210        118 YRKHTGRKPFKCVVCKQFFA  137 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~  137 (155)
                           +++||.|++|++.|.
T Consensus        65 -----~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 -----DTRDYICEFSGPSSG   79 (79)
T ss_dssp             -----TSCCCSCCSSSCCCC
T ss_pred             -----CCCCeeCCCCCCCCC
Confidence                 778899999999985

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.8e-16  Score=98.84  Aligned_cols=66  Identities=18%  Similarity=0.415  Sum_probs=46.3

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHh-HhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHH-HhhhhCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQH-LRRTHGQ  152 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~~H~~  152 (155)
                      ...+++||+|++||+.|.....|..|++ +|++.              ++++||.|++||+.|.+.+.|..| ++ .|++
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~--------------~~ekpf~C~~Cgk~F~~~~~L~~H~~r-~Htg   76 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV--------------VLNSSYVCVECNFLTKRYDALSEHNLK-YHPG   76 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC--------------CCSCCEEETTTTEEESSTHHHHTHHHH-TSTT
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC--------------CCCCCcCCCCCCcccCCHHHHHHHHHH-hcCC
Confidence            4456777888888888877777777765 35311              256677888888888888888888 55 7777


Q ss_pred             CCC
Q psy13210        153 ESI  155 (155)
Q Consensus       153 ~~p  155 (155)
                      ++|
T Consensus        77 ekp   79 (102)
T 2ghf_A           77 EEN   79 (102)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            776

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.64  E-value=2.9e-16  Score=100.85  Aligned_cols=76  Identities=28%  Similarity=0.517  Sum_probs=67.6

Q ss_pred             CCCccccc--ccccccccHHHHHHHHhHhcCCCCcH-----------HHHHHHHHhccCCCCeecCc--CcccccCchHH
Q psy13210         78 FRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYA-----------HIIRNHYRKHTGRKPFKCVV--CKQFFATYSGA  142 (155)
Q Consensus        78 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~-----------~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L  142 (155)
                      ++++|+|+  .|++.|.+...|..|+++| ++++|.           ..|..|+++|.++++|.|++  |++.|.+.+.|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999999 777775           88999999999999999986  99999999999


Q ss_pred             HHHHhhhhCCCCC
Q psy13210        143 YQHLRRTHGQESI  155 (155)
Q Consensus       143 ~~H~~~~H~~~~p  155 (155)
                      ..|++ .|.+++|
T Consensus        81 ~~H~~-~h~~~~~   92 (124)
T 1ubd_C           81 RTHVR-IHTGDRP   92 (124)
T ss_dssp             HHHHH-HHHCCCC
T ss_pred             HHHHH-HhCCCCc
Confidence            99999 7777765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.64  E-value=2.7e-16  Score=87.58  Aligned_cols=56  Identities=34%  Similarity=0.528  Sum_probs=47.5

Q ss_pred             CCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhh
Q psy13210         78 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus        78 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      ++++|+|++|++.|.....|..|+++|+                 +++||.|++|++.|.+.+.|..|++.+|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHT-----------------GEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHH-----------------CCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcC-----------------CCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3578999999999999999998888777                 7778999999999999999999999554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.6e-16  Score=91.17  Aligned_cols=62  Identities=23%  Similarity=0.378  Sum_probs=54.5

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhH-hcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      ++|.++++|+|+.|++.|.....|..|++. |.                ++++||.|++|++.|.+.+.|..|++.+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~----------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK----------------RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS----------------SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcC----------------CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            678889999999999999999999988876 51                277889999999999999999999996654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.7e-16  Score=94.02  Aligned_cols=70  Identities=16%  Similarity=0.198  Sum_probs=56.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      |+++|.++++|+|++|++.|.....|..|++.|.+...             .+++|.|++|++.|.+.+.|..|++ .|.
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-------------~~~~~~C~~C~~~f~~~~~L~~H~~-~h~   71 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF-------------VPAAFVCSKCGKTFTRRNTMARHAD-NCA   71 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC-------------CCCCEECSSSCCEESCHHHHHHHHH-HCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC-------------CCcceECCCCCChhCCHHHHHHHHH-Hcc
Confidence            34999999999999999999999999999887653210             2368999999999999999999999 666


Q ss_pred             CCCC
Q psy13210        152 QESI  155 (155)
Q Consensus       152 ~~~p  155 (155)
                      +++|
T Consensus        72 ~~~~   75 (86)
T 1x6h_A           72 GPDG   75 (86)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            6554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.63  E-value=9.1e-17  Score=107.06  Aligned_cols=77  Identities=26%  Similarity=0.340  Sum_probs=72.9

Q ss_pred             hhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccc--cccccccHHHHHHHHhHhcCCCCcH------------
Q psy13210         46 DRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYA------------  111 (155)
Q Consensus        46 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~------------  111 (155)
                      +.|..|++.|.....|..|+        ++|.++++|.|++  |++.|.....|..|+++|.++++|.            
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~  134 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHI--------RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN  134 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHT--------HHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSS
T ss_pred             cCCCCcccccCCHHHHHHHH--------HhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCC
Confidence            78999999999999999999        8899999999998  9999999999999999999988875            


Q ss_pred             -HHHHHHHHhccCCCCeecC
Q psy13210        112 -HIIRNHYRKHTGRKPFKCV  130 (155)
Q Consensus       112 -~~l~~H~~~h~~~~~~~C~  130 (155)
                       ..|..|+++|++++||.|.
T Consensus       135 ~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          135 SSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHHHhcCCCCCCCC
Confidence             7899999999999999985

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.62  E-value=6.9e-16  Score=85.88  Aligned_cols=56  Identities=27%  Similarity=0.647  Sum_probs=49.9

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      ||+|++|++.|.....|..|+++|.                 +++||.|++|++.|.+.+.|.+|++ .|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-----------------DVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-----------------SCCCEECSSSSCEESSHHHHHHHHH-SSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-----------------CCCCccCCCCCchhcCHHHHHHHHH-HhcccC
Confidence            6899999999999999888887776                 7788999999999999999999999 666554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=6.5e-16  Score=86.94  Aligned_cols=58  Identities=26%  Similarity=0.549  Sum_probs=51.6

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||+|++|++.|.....|..|+++|+                 +++||.|++|++.|.+.+.|.+|++..|+++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT-----------------NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT-----------------SSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC-----------------CCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            57999999999999999988887776                 77889999999999999999999855888753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=4.4e-16  Score=96.18  Aligned_cols=73  Identities=16%  Similarity=0.270  Sum_probs=61.6

Q ss_pred             hccCcHHHhhhHHhhhhhhhccCCCCCccccccccccc-ccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         54 QCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFS-YNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        54 ~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      .+.....+..|+        +.+.++++|+|++|++.| ....+|..|+++|                  +++||.|++|
T Consensus        15 ~~~~~~~~~~~~--------~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h------------------~~k~~~C~~C   68 (96)
T 2ctd_A           15 VYAAGSLEEQWY--------LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC------------------KQEMFTCHHC   68 (96)
T ss_dssp             SSCTTCHHHHHH--------HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH------------------CCCCCCCSSS
T ss_pred             CCCCchHHHHHH--------HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH------------------CCCCeECCCC
Confidence            456667788888        778888999999999999 8999988776655                  4567999999


Q ss_pred             cccccCchHHHHH-HhhhhCCC
Q psy13210        133 KQFFATYSGAYQH-LRRTHGQE  153 (155)
Q Consensus       133 ~k~f~~~~~L~~H-~~~~H~~~  153 (155)
                      ++.|.+.+.|..| ++ .|+++
T Consensus        69 gk~F~~~~~L~~H~~~-~H~~~   89 (96)
T 2ctd_A           69 GKQLRSLAGMKYHVMA-NHNSL   89 (96)
T ss_dssp             CCCCSSHHHHHHHHHH-HTCCC
T ss_pred             CCeeCCHHHHHHHhHH-hcCCC
Confidence            9999999999999 66 88764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=7.5e-16  Score=90.38  Aligned_cols=63  Identities=21%  Similarity=0.376  Sum_probs=58.4

Q ss_pred             ccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         40 MIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        40 ~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      .....+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~--------~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHK--------TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHH--------HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHH--------HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34457799999999999999999999        9999999999999999999999999999999998886

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=1.5e-15  Score=98.33  Aligned_cols=81  Identities=21%  Similarity=0.230  Sum_probs=64.9

Q ss_pred             cChhhhhhhhhhcc------CcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHH
Q psy13210         43 ISADRLERLRTQCA------TSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRN  116 (155)
Q Consensus        43 ~~~~~c~~C~~~~~------~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~  116 (155)
                      ...+.|+.|...|.      ....|..|+         .|.+++||+|++||+.|.....|..|+++|            
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~---------~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H------------   97 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL---------ASKAISQFVCPLCLMPFSSSVSLKQHIRYT------------   97 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH---------HHHHHCSEECTTTCCEESSHHHHHHHHHHT------------
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH---------HhCCCCCeECCCCCcccCCHhHHHHHHHHC------------
Confidence            35677999988776      334454554         466789999999999999999988887765            


Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                             ++||.|++|++.|.+.+.|.+|++ .|.+
T Consensus        98 -------~~~~~C~~C~k~f~~~~~l~~H~~-~h~~  125 (129)
T 2wbt_A           98 -------EHTKVCPVCKKEFTSTDSALDHVC-KKHN  125 (129)
T ss_dssp             -------CCCCBCTTTCCBCSSHHHHHHHHH-HTTC
T ss_pred             -------CCCCCCCCCCcccCCHHHHHHHHH-HHCC
Confidence                   346999999999999999999999 4544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.6e-15  Score=87.12  Aligned_cols=60  Identities=33%  Similarity=0.618  Sum_probs=53.9

Q ss_pred             ccCCCCCccccc--ccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210         74 RTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        74 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .++.++++|.|+  .|++.|.....|..|+++|.                 +++||.|++||+.|.+.+.|.+|++ .|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHT-----------------GQKPFQCRICMRNFSRSDHLTTHIR-THT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH-----------------CCCCEECTTTCCEESCHHHHHHHHT-TCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC-----------------CCCCeECCCCCchhCCHHHHHHHHH-hcC
Confidence            578889999997  59999999999998888777                 7778999999999999999999999 664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2e-15  Score=94.12  Aligned_cols=71  Identities=17%  Similarity=0.325  Sum_probs=60.8

Q ss_pred             cccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhc-cC---CCCCcccccccccccccHHHHHHH-HhHhcCCCCcHHH
Q psy13210         39 SMIDISADRLERLRTQCATSAELTQHEIRTIESMIR-TD---PFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYAHI  113 (155)
Q Consensus        39 ~~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~-~~---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~~~  113 (155)
                      ......+|.|+.|++.|...+.|..|+        + +|   .+++||+|++||+.|.....|..| +++|+        
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~--------r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht--------   75 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHV--------DSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP--------   75 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHH--------HHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST--------
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHH--------HhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC--------
Confidence            345567899999999999999999999        7 58   568999999999999999999888 67676        


Q ss_pred             HHHHHHhccCCCCeecCcCcc
Q psy13210        114 IRNHYRKHTGRKPFKCVVCKQ  134 (155)
Q Consensus       114 l~~H~~~h~~~~~~~C~~C~k  134 (155)
                               |++||.|.++..
T Consensus        76 ---------gekpy~C~~~~~   87 (102)
T 2ghf_A           76 ---------GEENFKLTMVKR   87 (102)
T ss_dssp             ---------TCCCEEEEECCC
T ss_pred             ---------CCCCeeCCcccC
Confidence                     777899987554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=7.7e-15  Score=86.64  Aligned_cols=62  Identities=21%  Similarity=0.330  Sum_probs=56.4

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      ....+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHR--------RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHH--------TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHH--------HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3446799999999999999999999        9999999999999999999999999999988866654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.51  E-value=1.2e-14  Score=90.76  Aligned_cols=86  Identities=13%  Similarity=0.083  Sum_probs=68.8

Q ss_pred             hhhhcccCCCcchhhhhhcccccccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHH
Q psy13210         17 AYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGC   96 (155)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~   96 (155)
                      .+.|..++..|.................+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR--------YIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG--------GGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHH--------HHhCCCCCeECCCcCCcccCHHH
Confidence            4566667666644333322222333456799999999999999999999        99999999999999999999999


Q ss_pred             HHHHHhHhcCCCCc
Q psy13210         97 MRSHIRTHTGEKPY  110 (155)
Q Consensus        97 l~~H~~~h~~~~~~  110 (155)
                      |..|+++|.++++|
T Consensus        89 L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           89 LAVHKTLHMQTSSP  102 (106)
T ss_dssp             HHHHHHHTTSCCCC
T ss_pred             HHHHHHHhCCCCCC
Confidence            99999999987775

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.7e-14  Score=82.77  Aligned_cols=60  Identities=17%  Similarity=0.220  Sum_probs=52.3

Q ss_pred             CCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecC-cCcccccCchHHHHHHhhhhCCCC
Q psy13210         76 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCV-VCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        76 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~-~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      ..+++||+|+.|++.|. ...|..|+++ +                 +++||.|+ +||+.|...+.|..|++ .|.+.+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~-----------------~~~p~~C~~~C~k~f~~~~~L~~H~~-~hc~~~   64 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-C-----------------PRLPVACPNQCGVGTVAREDLPGHLK-DSCNTA   64 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-C-----------------SSSEEECTTCCSCCEEETTTHHHHHH-TTSSSC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-c-----------------CCcCccCCcccCcccccHHHHHHHHH-hhcccC
Confidence            45678999999999999 9988888776 5                 77889999 99999999999999999 787766


Q ss_pred             C
Q psy13210        155 I  155 (155)
Q Consensus       155 p  155 (155)
                      |
T Consensus        65 ~   65 (66)
T 2eod_A           65 L   65 (66)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.50  E-value=4.4e-14  Score=86.55  Aligned_cols=62  Identities=31%  Similarity=0.496  Sum_probs=55.6

Q ss_pred             CCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210         76 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus        76 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ..++++|+|++|++.|.....|..|+++|.                 ++++|.|++|++.|.+...|..|++ .|.+++|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~   64 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHT-----------------GVKPYKCKTCDYAAADSSSLNKHLR-IHSDERP   64 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCC-----------------CCCSEECSSSCCEESSHHHHHHHHH-HSCCCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcC-----------------CCCCEeCCCCCCccCCHHHHHHHHH-HhCCCCC
Confidence            456789999999999999999998888776                 6778999999999999999999999 7887765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.6e-14  Score=83.70  Aligned_cols=61  Identities=18%  Similarity=0.351  Sum_probs=56.6

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      ...+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|.+++|.
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~--------~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHE--------RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHH--------GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHH--------HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            346799999999999999999999        9999999999999999999999999999999987763

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.48  E-value=4.1e-14  Score=85.58  Aligned_cols=55  Identities=35%  Similarity=0.584  Sum_probs=50.0

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhh
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      ++||+|++|++.|.....|..|+++|.                 +++||.|++|++.|.+.+.|..|++.+|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT-----------------GEKPFACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH-----------------CCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC-----------------CCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence            478999999999999999998888777                 7778999999999999999999999554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.48  E-value=1.9e-14  Score=79.91  Aligned_cols=56  Identities=18%  Similarity=0.286  Sum_probs=52.8

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +|.|+.|++.|.....|..|+        ++|.++++|.|++|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI--------RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH--------HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH--------HhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            478999999999999999999        99999999999999999999999999999998764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=7.3e-14  Score=87.77  Aligned_cols=63  Identities=19%  Similarity=0.340  Sum_probs=56.5

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ..|.++++|+| .|++.|.....|..|++.|.                 ++++|.|++|++.|.+...|..|++ .|.++
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   63 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHL-----------------GLRPYGCGVCGKKFKMKHHLVGHMK-IHTGI   63 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHS-----------------CCCSEECTTTSCEESSSHHHHHHHT-TTCCC
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcC-----------------CCcCccCCCCCcccCCHHHHHHHHH-HcCCC
Confidence            46788999999 99999999999998888776                 6778999999999999999999999 78777


Q ss_pred             CC
Q psy13210        154 SI  155 (155)
Q Consensus       154 ~p  155 (155)
                      +|
T Consensus        64 ~~   65 (110)
T 2csh_A           64 KP   65 (110)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=86.73  Aligned_cols=59  Identities=19%  Similarity=0.220  Sum_probs=53.8

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHH-hHhcCCC
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEK  108 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  108 (155)
                      ....+.|+.|++.|.....|..|+        ++|.+++||+|++|++.|.....|.+|+ +.|++++
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~--------~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHL--------RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHH--------HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhh--------hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            346788999999999999999999        9999999999999999999999999997 4688664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=6.5e-14  Score=82.80  Aligned_cols=61  Identities=20%  Similarity=0.337  Sum_probs=54.1

Q ss_pred             CCCCcccccc--cccccccHHHHHHHHh-HhcCCCCcHHHHHHHHHhccCCCCeecCc--CcccccCchHHHHHHhhhhC
Q psy13210         77 PFRHKFVCYA--CDYFSYNIGCMRSHIR-THTGEKPYAHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus        77 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .++++|+|+.  |++.|.....|..|++ .|.                 ++++|.|++  |++.|.+.+.|.+|++ .|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-----------------~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~   64 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-----------------HQKSFSCPEPACGKSFNFKKHLKEHMK-LHS   64 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-----------------SCCCEECSCTTTCCEESSHHHHHHHHH-HHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-----------------CCCCeECCCCCCcCccCCHHHHHHHHH-HhC
Confidence            4578899987  9999999999998887 566                 778899999  9999999999999999 788


Q ss_pred             CCCC
Q psy13210        152 QESI  155 (155)
Q Consensus       152 ~~~p  155 (155)
                      +++|
T Consensus        65 ~~~~   68 (79)
T 2dlk_A           65 DTRD   68 (79)
T ss_dssp             TSCC
T ss_pred             CCCC
Confidence            8776

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.9e-14  Score=84.55  Aligned_cols=70  Identities=13%  Similarity=0.031  Sum_probs=60.5

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCC----CcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHH
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFR----HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNH  117 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H  117 (155)
                      ...+|.|+.|++.|.....|..|+        +.+...    ++|+|++|++.|.....|..|+++|.            
T Consensus        12 ~~k~~~C~~C~~~f~~~~~l~~H~--------~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~------------   71 (86)
T 1x6h_A           12 GEKPYACSHCDKTFRQKQLLDMHF--------KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA------------   71 (86)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHH--------HHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC------------
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHH--------HHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc------------
Confidence            346799999999999999999998        655543    78999999999999999888887776            


Q ss_pred             HHhccCCCCeecCcCcccc
Q psy13210        118 YRKHTGRKPFKCVVCKQFF  136 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f  136 (155)
                           +++++.|..|+.+|
T Consensus        72 -----~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           72 -----GPDGVEGENSGPSS   85 (86)
T ss_dssp             -----CCCSCCCCCCCCCC
T ss_pred             -----CCCCcccCCCCCCC
Confidence                 77789999999876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.45  E-value=9.8e-14  Score=82.44  Aligned_cols=57  Identities=23%  Similarity=0.433  Sum_probs=51.4

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ||+|++|++.|.....|..|+++|.                 ++++|.|++|++.|.+...|..|++ .|.+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~   57 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-----------------DTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKP   57 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-----------------TCCCEECSSSCCEESSHHHHHHHHH-HHHTCCC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-----------------CCCCeeCCcCChhhCCHHHHHHHHH-HhcCCCC
Confidence            5899999999999999998888776                 6778999999999999999999999 7777765

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.3e-13  Score=84.32  Aligned_cols=59  Identities=24%  Similarity=0.464  Sum_probs=52.3

Q ss_pred             CCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         77 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        77 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      .++++|+|++|++.|.....|..|+++|.                 ++++|.|++|++.|.+...|..|++ .|.++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   61 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS-----------------GEKPYSCPVCGLRFKRKDRMSYHVR-SHDGS   61 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC-----------------SSCSEECSSSCCEESCHHHHHHHHH-HHCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC-----------------CCCCCcCCCCCCccCCHHHHHHHHH-HhcCC
Confidence            46789999999999999999888887776                 7778999999999999999999999 56654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=5.2e-14  Score=82.00  Aligned_cols=60  Identities=18%  Similarity=0.184  Sum_probs=55.5

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ....+|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+++|+++.
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~--------~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQ--------RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHH--------HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHH--------HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3446799999999999999999999        99999999999999999999999999999998764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.43  E-value=1.5e-13  Score=83.04  Aligned_cols=59  Identities=36%  Similarity=0.699  Sum_probs=52.2

Q ss_pred             CCccccc--ccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210         79 RHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus        79 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +++|.|+  .|++.|.....|..|+++|.                 ++++|.|++|++.|.+.+.|..|++ .|.+++|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~   62 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHT-----------------GQKPFQCRICMRNFSRSDHLTTHIR-THTGEKP   62 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHH-----------------CCCCEECTTTCCEESCHHHHHHHHH-HHHCCCC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhC-----------------CCCCccCCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            5789998  59999999999999888776                 6778999999999999999999999 7777765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.43  E-value=4.5e-14  Score=78.39  Aligned_cols=54  Identities=20%  Similarity=0.288  Sum_probs=50.2

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      .+|.|+.|++.|.....|..|+        ++|.+++||+|++|++.|.....|..|+++|.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHL--------RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHH--------HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHH--------HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            5689999999999999999999        99999999999999999999999999999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.5e-13  Score=77.00  Aligned_cols=55  Identities=18%  Similarity=0.250  Sum_probs=51.3

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHH-hHhcCC
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGE  107 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  107 (155)
                      +|.|+.|++.|.....|..|+        ++|.++++|+|++|++.|.....|..|+ ++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHY--------RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHH--------HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHH--------HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            588999999999999999999        9999999999999999999999999996 678764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=3.6e-13  Score=82.34  Aligned_cols=28  Identities=21%  Similarity=0.233  Sum_probs=14.8

Q ss_pred             eecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |.|++|++.|.+.+.|.+|++ .|++++|
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   90 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIR-VHTGEKS   90 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHH-HHHTCCC
T ss_pred             cCCCCCCcccCCHHHHHHHHH-hcCCCCC
Confidence            455555555555555555555 4554443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.6e-13  Score=84.58  Aligned_cols=59  Identities=17%  Similarity=0.216  Sum_probs=53.4

Q ss_pred             ccChhhhhhhhhhc-cCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHH-HhHhcCCCC
Q psy13210         42 DISADRLERLRTQC-ATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKP  109 (155)
Q Consensus        42 ~~~~~~c~~C~~~~-~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  109 (155)
                      ...+|.|+.|++.| .....|..|+        ++| ++++|+|.+||+.|.....|..| +++|+++..
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~--------~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHM--------ENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHH--------HHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHH--------HHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            44679999999999 8999999999        999 99999999999999999999999 888975433

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=3.5e-13  Score=82.34  Aligned_cols=58  Identities=22%  Similarity=0.103  Sum_probs=50.4

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhcc-CCCCCc--------ccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRT-DPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      ..+.|..|++.|.....|..|+        ++ |.++++        |.|++|++.|.....|..|+++|++++|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~--------~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   90 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHV--------TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS   90 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHH--------HHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC
T ss_pred             CCCcccccccccCCHHHHHHHH--------HHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            3467999999999999999999        76 888877        9999999999999999999888874443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.6e-13  Score=71.50  Aligned_cols=44  Identities=16%  Similarity=0.120  Sum_probs=39.2

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM-----------------GEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG-----------------SCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888777                 6777899887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.39  E-value=4.9e-13  Score=77.71  Aligned_cols=59  Identities=32%  Similarity=0.610  Sum_probs=50.7

Q ss_pred             ccCCCCCcccccc--cccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCc--CcccccCchHHHHHHhhh
Q psy13210         74 RTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRT  149 (155)
Q Consensus        74 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~  149 (155)
                      ......++|+|+.  |++.|.....|..|+++|+                 +++||.|++  |++.|.....|.+|++ .
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~~~C~k~f~~~~~l~~H~~-~   71 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-----------------GEKPFSCSWKGCERRFARSDELSRHRR-T   71 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHS-----------------SSCSEECCCTTCCCEESSHHHHHHHTT-T
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcC-----------------CCCCccCCCCCCCcccCCHHHHHhHhh-c
Confidence            4556678999998  9999999999888887776                 778899975  9999999999999998 4


Q ss_pred             h
Q psy13210        150 H  150 (155)
Q Consensus       150 H  150 (155)
                      |
T Consensus        72 H   72 (72)
T 2epa_A           72 H   72 (72)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.6e-14  Score=86.84  Aligned_cols=61  Identities=13%  Similarity=0.111  Sum_probs=55.6

Q ss_pred             ccChhhhhhhhhhcc-CcHHHhhhHHhhhhhhhccCCC-CCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         42 DISADRLERLRTQCA-TSAELTQHEIRTIESMIRTDPF-RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~-~~~~l~~h~~~~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      ...+|.|+.|++.|. ....|..|+        ++|.+ +++|+|++|++.|.....|..|+++|++++|+
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L~~H~--------~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGLKKHM--------EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHHHHHH--------HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             cCCCcCCCCCCCChhhhHHHHHHHH--------HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            447799999999999 999999999        88887 89999999999999999999999999877664

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.4e-13  Score=71.57  Aligned_cols=44  Identities=23%  Similarity=0.212  Sum_probs=39.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT-----------------TCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            4599999999999999999999999998888777                 6778899887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.38  E-value=3.5e-13  Score=71.58  Aligned_cols=44  Identities=20%  Similarity=0.210  Sum_probs=39.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS-----------------CCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            4499999999999999999999999998888777                 6777899887

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.8e-14  Score=88.92  Aligned_cols=83  Identities=7%  Similarity=0.049  Sum_probs=61.7

Q ss_pred             hhhhhcccCCCcchhhhhhccccc--cccc-Chhhhhhhhhhc--cCcHHHhhhHHhhhhhhhccCCCCCcccccccccc
Q psy13210         16 YAYEKDAQDGGFSKLKRALDVNQS--MIDI-SADRLERLRTQC--ATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYF   90 (155)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~c~~C~~~~--~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~   90 (155)
                      +.+.|..++..|............  .... ..+.|+.|++.|  .....|..|+        ++|.+++||+|++|++.
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~--------~~H~~~~~~~C~~C~k~   89 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME--------GKEDAQKVLKCMYCGHS   89 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC--------CSCCCCSSCBCSSSCCB
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh--------hccCCCcceECCCCCCc
Confidence            346677777666433322222111  1222 334599999999  8899999999        99999999999999999


Q ss_pred             cccHHHHHHHHhHhcC
Q psy13210         91 SYNIGCMRSHIRTHTG  106 (155)
Q Consensus        91 f~~~~~l~~H~~~h~~  106 (155)
                      |.....|..|+++|..
T Consensus        90 f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           90 FESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CSSHHHHHHHHHHTTT
T ss_pred             cCCHHHHHHHHHHhCC
Confidence            9999999999998764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.7e-13  Score=77.44  Aligned_cols=57  Identities=12%  Similarity=0.056  Sum_probs=52.1

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhcc-C-CCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRT-D-PFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~-~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      ...+|.|+.|++.|.....|..|+        ++ | .++++|+|++|++.|.....|..|+++|.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~--------~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHY--------VTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHH--------HHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHH--------HHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            446799999999999999999999        76 7 689999999999999999999999998764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=4e-13  Score=73.91  Aligned_cols=48  Identities=21%  Similarity=0.414  Sum_probs=41.8

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHh-HhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFAT  138 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~  138 (155)
                      ..+.++++|+|++|++.|.....|..|++ +|.                 +++||.|++|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-----------------~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-----------------SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSC-----------------CCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcC-----------------CCCCccCCCCCCCCCC
Confidence            46778899999999999999999888875 565                 7888999999999986

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.6e-13  Score=71.14  Aligned_cols=44  Identities=18%  Similarity=0.216  Sum_probs=39.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT-----------------GQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHH-----------------SCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888877                 6777889887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.1e-13  Score=71.24  Aligned_cols=44  Identities=18%  Similarity=0.118  Sum_probs=39.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGT-----------------TCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999999888777                 6777888887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.5e-15  Score=87.56  Aligned_cols=64  Identities=9%  Similarity=0.133  Sum_probs=54.1

Q ss_pred             HHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccC
Q psy13210         59 AELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFAT  138 (155)
Q Consensus        59 ~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~  138 (155)
                      ..|..|+        ++|.++++|.|++||+.|.....|..                        +++|.|++|++.|.+
T Consensus         4 ~~l~~H~--------~~h~~~~~~~C~~C~k~f~~~~~l~~------------------------~~~~~C~~C~~~f~~   51 (73)
T 2ctu_A            4 GSSGKRQ--------KIHLGDRSQKCSKCGIIFIRRSTLSR------------------------RKTPMCEKCRKDSCQ   51 (73)
T ss_dssp             CSCCCCC--------CCCCCCSEEECSSSCCEEECCCCCCC------------------------SSSCCCHHHHHTCSC
T ss_pred             hhHHHHH--------HHhCCCCCeeCCcccchhCCHHHhCc------------------------CCCCCCCCCChhhcC
Confidence            4566666        89999999999999999988877664                        567999999999999


Q ss_pred             chHHHHHHhhhhCCCCC
Q psy13210        139 YSGAYQHLRRTHGQESI  155 (155)
Q Consensus       139 ~~~L~~H~~~~H~~~~p  155 (155)
                      .+.|..|++ .|++++|
T Consensus        52 ~~~l~~H~~-~H~~~~~   67 (73)
T 2ctu_A           52 EAALNKDEG-NESGKKT   67 (73)
T ss_dssp             CCSSCCCSS-CCCCCCC
T ss_pred             HHHHHHHHH-hhcCCCC
Confidence            999999998 7888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.8e-13  Score=71.02  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTC-----------------CSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888777                 7778899887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.4e-13  Score=71.16  Aligned_cols=44  Identities=11%  Similarity=0.059  Sum_probs=39.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|...+.|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF-----------------REKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHH-----------------STTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHc-----------------CCCCCCCCCC
Confidence            4499999999999999999999999999988877                 6777888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.37  E-value=5.8e-13  Score=70.69  Aligned_cols=44  Identities=20%  Similarity=0.216  Sum_probs=38.7

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHS-----------------SCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888877

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.2e-13  Score=71.24  Aligned_cols=44  Identities=20%  Similarity=0.218  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTS-----------------CSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999999988777                 6777888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.8e-13  Score=70.33  Aligned_cols=44  Identities=16%  Similarity=0.124  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT-----------------GERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS-----------------CCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            3389999999999999999999999998888777                 6777899887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.7e-13  Score=70.69  Aligned_cols=43  Identities=19%  Similarity=0.228  Sum_probs=38.5

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTS-----------------CCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcC-----------------CCCCCCCCCC
Confidence            389999999999999999999999998888777                 6777888887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.5e-13  Score=70.75  Aligned_cols=44  Identities=23%  Similarity=0.195  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHA-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHT-----------------TSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.4e-13  Score=70.73  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=38.6

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC-----------------SSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999988887776                 7778899887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.6e-13  Score=70.69  Aligned_cols=44  Identities=20%  Similarity=0.187  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHS-----------------CCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.6e-13  Score=70.44  Aligned_cols=44  Identities=18%  Similarity=0.196  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT-----------------GYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHT-----------------CCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 7778899887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.1e-13  Score=70.59  Aligned_cols=44  Identities=18%  Similarity=0.073  Sum_probs=39.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT-----------------GEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHH-----------------CCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHc-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888877                 6777899887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.4e-13  Score=69.81  Aligned_cols=43  Identities=19%  Similarity=0.190  Sum_probs=38.2

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA-----------------EEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT-----------------SSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            388999999999999999999999998888777                 6777888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.5e-13  Score=70.75  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHH-----------------CSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999999888877                 6777888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5e-13  Score=70.89  Aligned_cols=44  Identities=20%  Similarity=0.255  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTC-----------------CCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 7778899887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.6e-13  Score=70.66  Aligned_cols=44  Identities=20%  Similarity=0.229  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTT-----------------TCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6778899887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.2e-13  Score=70.49  Aligned_cols=43  Identities=21%  Similarity=0.248  Sum_probs=38.3

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT-----------------GVKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGS-----------------CCCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            389999999999999999999999998888777                 7778899887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.35  E-value=6.9e-13  Score=70.39  Aligned_cols=44  Identities=18%  Similarity=0.107  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT-----------------REKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGC-----------------CSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.5e-13  Score=70.46  Aligned_cols=44  Identities=18%  Similarity=0.200  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHH-----------------CCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888877                 6777888887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.35  E-value=6.9e-13  Score=70.31  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS-----------------GEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGT-----------------SCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999999988777                 6777888887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.8e-13  Score=70.66  Aligned_cols=44  Identities=23%  Similarity=0.258  Sum_probs=39.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHS-----------------SCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888777                 6777888887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=7.1e-13  Score=70.26  Aligned_cols=44  Identities=23%  Similarity=0.178  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGC-----------------CCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888776                 7778899887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=5.5e-13  Score=70.79  Aligned_cols=44  Identities=20%  Similarity=0.169  Sum_probs=38.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTS-----------------CSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 7778899887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.3e-13  Score=71.17  Aligned_cols=44  Identities=16%  Similarity=0.139  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT-----------------GERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSC-----------------SCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888776                 7778899887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=7e-13  Score=70.34  Aligned_cols=44  Identities=25%  Similarity=0.261  Sum_probs=38.7

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSC-----------------CSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999988887776                 7778899887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.9e-13  Score=70.36  Aligned_cols=44  Identities=20%  Similarity=0.256  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHS-----------------SSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=9e-13  Score=69.90  Aligned_cols=44  Identities=14%  Similarity=0.132  Sum_probs=38.7

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHM-----------------GQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHS-----------------CCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.34  E-value=7.1e-13  Score=70.31  Aligned_cols=43  Identities=21%  Similarity=0.277  Sum_probs=38.5

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGS-----------------SSSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHHHHcC-----------------CCCCcCCCCC
Confidence            389999999999999999999999998888777                 7777888887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7e-13  Score=70.32  Aligned_cols=43  Identities=19%  Similarity=0.196  Sum_probs=38.3

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTC-----------------CCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            389999999999999999999999998888777                 7778899887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.8e-13  Score=70.38  Aligned_cols=43  Identities=19%  Similarity=0.249  Sum_probs=38.3

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS-----------------GKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGS-----------------SCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhc-----------------CCCCCCCCCC
Confidence            389999999999999999999999998888777                 6778899887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.5e-13  Score=70.45  Aligned_cols=43  Identities=21%  Similarity=0.248  Sum_probs=38.6

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT-----------------GGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHH-----------------SCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            389999999999999999999999999988887                 6777888887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.3e-13  Score=70.03  Aligned_cols=44  Identities=18%  Similarity=0.140  Sum_probs=38.6

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT-----------------AEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT-----------------CCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888776                 7778888887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.3e-13  Score=70.81  Aligned_cols=44  Identities=23%  Similarity=0.211  Sum_probs=39.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGS-----------------SCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999999988887                 6777899887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.33  E-value=8.2e-13  Score=70.05  Aligned_cols=43  Identities=19%  Similarity=0.263  Sum_probs=38.3

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGG-----------------CCCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcC-----------------CCCCCCCCCC
Confidence            389999999999999999999999998888777                 6777888877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.33  E-value=7.4e-13  Score=70.19  Aligned_cols=44  Identities=20%  Similarity=0.133  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT-----------------GVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSS-----------------SCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 7777888877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.1e-13  Score=69.87  Aligned_cols=44  Identities=18%  Similarity=0.185  Sum_probs=38.6

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTS-----------------SCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998887776                 7778899887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=8.9e-13  Score=69.87  Aligned_cols=44  Identities=18%  Similarity=0.101  Sum_probs=38.5

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT-----------------GENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTT-----------------TSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888776                 6777888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.9e-13  Score=69.73  Aligned_cols=44  Identities=16%  Similarity=0.150  Sum_probs=38.5

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT-----------------KQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTS-----------------CCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777888876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-12  Score=69.43  Aligned_cols=44  Identities=20%  Similarity=0.230  Sum_probs=38.7

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHh-HhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|++ +|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~-----------------~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT-----------------GEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT-----------------TSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcC-----------------CCCCCCCCCC
Confidence            4499999999999999999999999998887 776                 6777888887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.1e-12  Score=69.47  Aligned_cols=44  Identities=18%  Similarity=0.204  Sum_probs=38.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTT-----------------TSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6677888765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=68.78  Aligned_cols=44  Identities=25%  Similarity=0.252  Sum_probs=38.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC-----------------CCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            4489999999999999999999999998888777                 6667888765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.2e-12  Score=69.45  Aligned_cols=44  Identities=25%  Similarity=0.247  Sum_probs=38.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGS-----------------CCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998888777                 6777889887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=9.7e-13  Score=69.73  Aligned_cols=43  Identities=21%  Similarity=0.191  Sum_probs=38.2

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHM-----------------GEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTC-----------------CSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            389999999999999999999999998888776                 7777888877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1e-12  Score=69.63  Aligned_cols=44  Identities=16%  Similarity=0.012  Sum_probs=38.6

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|+                 +++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV-----------------DDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCC-----------------SCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            3489999999999999999999999998887776                 7778888887

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.30  E-value=4.9e-13  Score=83.61  Aligned_cols=83  Identities=13%  Similarity=0.036  Sum_probs=61.8

Q ss_pred             hhhhcccCCCcchhhhhhcccccccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHH
Q psy13210         17 AYEKDAQDGGFSKLKRALDVNQSMIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGC   96 (155)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~   96 (155)
                      .+.|..++..|............  -..+|.|+.|++.|.....|..|+        + |.++++|+|++|++.|.....
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~--H~~~~~C~~C~~~f~~~~~l~~H~--------~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERL--CRNAAVCPYCSLRFFSPELKQEHE--------S-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH--HHHSBCCTTTCCCBSSHHHHHHHH--------H-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHH--CCCCccCCCCCCccCCHHHHHHHH--------H-cCCCCCccCccccchhCCHHH
Confidence            45666666655332222111111  125789999999999999999998        7 889999999999999999999


Q ss_pred             HHHHHh-HhcCCCCc
Q psy13210         97 MRSHIR-THTGEKPY  110 (155)
Q Consensus        97 l~~H~~-~h~~~~~~  110 (155)
                      |..|++ .|.++++|
T Consensus        85 L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMA   99 (107)
T ss_dssp             HHHHHHHTSCCCCCC
T ss_pred             HHHHHHHHcCCCCCC
Confidence            999987 78755554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.29  E-value=2.7e-13  Score=76.81  Aligned_cols=53  Identities=17%  Similarity=0.260  Sum_probs=44.4

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHH
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQ  144 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~  144 (155)
                      |+++|.+++||+|++||+.|.....|.   +                 +|++++||.|++||+.|...+++..
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-----------------~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---L-----------------FDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---H-----------------EETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---h-----------------hcCCCCCEECCCCCCccccCccccc
Confidence            349999999999999999999877664   3                 4558889999999999998876643

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.29  E-value=3.5e-12  Score=76.83  Aligned_cols=59  Identities=29%  Similarity=0.504  Sum_probs=52.0

Q ss_pred             CCcccccc--cccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecC--cCcccccCchHHHHHHhhhhCCCC
Q psy13210         79 RHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        79 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .++|.|++  |++.|.....|..|+++|.                 ++++|.|+  .|++.|.+...|..|++ .|.+++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~   64 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT-----------------GEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHR   64 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC-----------------SSCCEECCSTTTCCEESSHHHHHHHHH-HHHCCC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC-----------------CCCCcCCCCCCCCCccCCHHHHHHHHH-HcCCCC
Confidence            46799999  9999999999988887776                 77789997  59999999999999999 788776


Q ss_pred             C
Q psy13210        155 I  155 (155)
Q Consensus       155 p  155 (155)
                      |
T Consensus        65 ~   65 (89)
T 2wbs_A           65 P   65 (89)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=6.1e-13  Score=78.48  Aligned_cols=60  Identities=20%  Similarity=0.200  Sum_probs=52.5

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCC---CCcccccccccccccHHHHHHHHh-HhcCCCC
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPF---RHKFVCYACDYFSYNIGCMRSHIR-THTGEKP  109 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  109 (155)
                      ...+|.|+.|++.|.....|..|+        ++|.+   +++|+|++|++.|.....|..|++ .|.++++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~--------~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQ--------RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHH--------HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHH--------HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            346799999999999999999999        88875   889999999999999999999985 4665554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.2e-12  Score=68.35  Aligned_cols=43  Identities=21%  Similarity=0.207  Sum_probs=38.1

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT-----------------GEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTS-----------------SSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            488999999999999999999999998888777                 6777888887

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.28  E-value=3.5e-12  Score=76.01  Aligned_cols=54  Identities=24%  Similarity=0.462  Sum_probs=48.1

Q ss_pred             cccc--cccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCc--CcccccCchHHHHHHhhhhCC
Q psy13210         81 KFVC--YACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus        81 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ||+|  +.||+.|.....|..|+++|.                 +++||.|++  |++.|.+.+.|..|++ .|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-----------------QQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-----------------TTCCEECCSTTCCCEESSHHHHHHHHH-HHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-----------------CCCCeeCCCCCCcCccCCHHHHHHHHH-HhCC
Confidence            5899  899999999999998888776                 777899998  9999999999999999 5543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=8.3e-13  Score=75.56  Aligned_cols=59  Identities=8%  Similarity=0.068  Sum_probs=53.5

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCccccc-ccccccccHHHHHHHHhHhcCCCC
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCY-ACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      ....+|.|+.|++.|. ...|..|+        ++ .+++||+|+ .||+.|...+.|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~--------~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQ--------YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHH--------HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHH--------HH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3446799999999999 99999999        88 899999999 999999999999999999987665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=2.7e-12  Score=68.76  Aligned_cols=44  Identities=18%  Similarity=0.380  Sum_probs=37.9

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcc
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQ  134 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k  134 (155)
                      ..+..+++|+|++|++.|.....|..|+++|+                 +++||.|++|+|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS-----------------GEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSC-----------------SCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcC-----------------CCCCccCCCCCC
Confidence            45678899999999999999999888887776                 777899999986

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.2e-12  Score=68.35  Aligned_cols=43  Identities=19%  Similarity=0.111  Sum_probs=38.4

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +++|.++++|+|++|++.|.....|..|+++|+                 +++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT-----------------REKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH-----------------HCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC-----------------CCCCCCCCCC
Confidence            478999999999999999999999999988887                 6777888887

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.1e-12  Score=75.26  Aligned_cols=60  Identities=17%  Similarity=0.185  Sum_probs=52.1

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhc-cCCCC-CcccccccccccccHHHHHHHHhHh-cCCCC
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIR-TDPFR-HKFVCYACDYFSYNIGCMRSHIRTH-TGEKP  109 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~-~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~  109 (155)
                      ...+|.|+.|++.|.....|..|+        + .|.++ ++|+|++|++.|.....|..|++++ ..+.|
T Consensus        12 ~~k~~~C~~C~k~f~~~~~L~~H~--------~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           12 GEKPYECYICHARFTQSGTMKMHI--------LQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHH--------HHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCCeECCCcCchhCCHHHHHHHH--------HHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            446799999999999999999998        6 67764 8999999999999999999999984 44444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.6e-12  Score=67.53  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=32.4

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK   39 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSS
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4599999999999999999999999999988887333

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.27  E-value=1.3e-12  Score=67.83  Aligned_cols=38  Identities=29%  Similarity=0.503  Sum_probs=35.1

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   38 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQR-THAGESG   38 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHG-GGCCCCS
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHH-hcCCCCC
Confidence            4678999999999999999999999999999 8998886

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.27  E-value=9.4e-13  Score=72.38  Aligned_cols=40  Identities=13%  Similarity=0.258  Sum_probs=34.8

Q ss_pred             HHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        115 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       115 ~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ..|+++|++++||.|++||+.|.+.+.|..|++ .|++++|
T Consensus        13 ~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp   52 (54)
T 1yui_A           13 EKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHFAKP   52 (54)
T ss_dssp             CCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTTTSC
T ss_pred             hhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-HhccCCC
Confidence            345555668899999999999999999999999 8999887

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=4.6e-12  Score=66.79  Aligned_cols=43  Identities=16%  Similarity=0.193  Sum_probs=38.1

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCc
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCK  133 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~  133 (155)
                      .+|.++++|+|++|++.|.....|..|+++|+                 ++++|.|++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~-----------------~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHD-----------------GSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHS-----------------CCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHcc-----------------CCCCCCCcCCC
Confidence            56888999999999999999999988888777                 77789999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=68.29  Aligned_cols=39  Identities=31%  Similarity=0.382  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSG   40 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHG-GGSSCSC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHh-HhcCCCC
Confidence            36778999999999999999999999999999 8998887

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=67.65  Aligned_cols=38  Identities=29%  Similarity=0.522  Sum_probs=35.1

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   38 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQK-MHTVKSG   38 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHH-HTSCCSS
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHH-HhCCCCC
Confidence            4678999999999999999999999999999 7998886

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.25  E-value=1.5e-11  Score=75.62  Aligned_cols=61  Identities=31%  Similarity=0.534  Sum_probs=53.4

Q ss_pred             CCCCcccccc--cccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecC--cCcccccCchHHHHHHhhhhCC
Q psy13210         77 PFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus        77 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ...++|.|++  |++.|.....|..|+++|.                 ++++|.|+  .|++.|.+...|..|++ .|.+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------------~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~   72 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT-----------------GEKPYKCTWEGCDWRFARSDELTRHYR-KHTG   72 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHS-----------------CCCCEECCSSSCCCEESSHHHHHHHHH-HHTS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhC-----------------CCCCeeCCCCCCCCccCCHHHHHHHHH-HhCC
Confidence            4567899997  9999999999998888776                 67789996  69999999999999999 7888


Q ss_pred             CCC
Q psy13210        153 ESI  155 (155)
Q Consensus       153 ~~p  155 (155)
                      ++|
T Consensus        73 ~~~   75 (100)
T 2ebt_A           73 AKP   75 (100)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            775

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.25  E-value=1.3e-12  Score=71.82  Aligned_cols=50  Identities=12%  Similarity=0.137  Sum_probs=45.7

Q ss_pred             hhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         53 TQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        53 ~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +.|.....|..|+        ++|.++++|.|++||+.|.....|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~--------~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPR--------SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCH--------HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHH--------HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            5577778888898        9999999999999999999999999999999988887

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.7e-12  Score=66.70  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=31.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE   38 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCC
Confidence            448999999999999999999999999998888733

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=1.7e-12  Score=75.53  Aligned_cols=57  Identities=26%  Similarity=0.309  Sum_probs=52.0

Q ss_pred             cccChhhhh--hhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhc
Q psy13210         41 IDISADRLE--RLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        41 ~~~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ....+|.|+  .|++.|.....|..|+        ++|.++++|+|++||+.|.....|..|+++|+
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~--------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHI--------RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHH--------HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHH--------HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344679997  6999999999999999        89999999999999999999999999999874

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.5e-12  Score=68.40  Aligned_cols=39  Identities=33%  Similarity=0.549  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKSG   40 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHH-HCCCCCS
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhH-hcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.3e-12  Score=66.32  Aligned_cols=37  Identities=27%  Similarity=0.373  Sum_probs=32.3

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK   39 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCC
Confidence            4489999999999999999999999999988887333

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.3e-12  Score=66.53  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=31.4

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG   37 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC
Confidence            44899999999999999999999999999888873

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=7e-12  Score=66.40  Aligned_cols=36  Identities=25%  Similarity=0.290  Sum_probs=31.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGE   38 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTS
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCC
Confidence            348999999999999999999999999998888733

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.6e-12  Score=66.76  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=32.2

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK   39 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCC
Confidence            3489999999999999999999999999988887333

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=64.92  Aligned_cols=36  Identities=19%  Similarity=0.413  Sum_probs=33.9

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIK-TNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHH-HHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHH-HHcCCCC
Confidence            46899999999999999999999999999 8999887

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=67.67  Aligned_cols=38  Identities=24%  Similarity=0.499  Sum_probs=35.5

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   39 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGP   39 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-GTSCCSC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-HhCCCCC
Confidence            6678999999999999999999999999999 8999887

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.5e-12  Score=66.83  Aligned_cols=37  Identities=16%  Similarity=0.243  Sum_probs=32.3

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER   39 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCC
Confidence            4489999999999999999999999999988887433

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.1e-12  Score=66.32  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=30.9

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG   37 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC
Confidence            3899999999999999999999999988888773

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.23  E-value=2.3e-12  Score=66.88  Aligned_cols=38  Identities=21%  Similarity=0.364  Sum_probs=35.3

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k~   39 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGP   39 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH-HTTCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh-hcCCCCC
Confidence            4678999999999999999999999999999 8999887

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=8.1e-12  Score=66.11  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=31.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGE   38 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC
Confidence            348999999999999999999999999998888733

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-12  Score=68.68  Aligned_cols=39  Identities=28%  Similarity=0.513  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSGKKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHG-GGSSCCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHH-HhcCCCC
Confidence            46788999999999999999999999999999 8998886

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.3e-12  Score=68.34  Aligned_cols=38  Identities=32%  Similarity=0.563  Sum_probs=35.6

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHTGEKP   40 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHH-HHSSSSC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCC
Confidence            6778999999999999999999999999999 8998887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=67.85  Aligned_cols=39  Identities=26%  Similarity=0.491  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTKQKP   40 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHH-HTSCCCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHH-HcCCCCC
Confidence            47788999999999999999999999999999 8998886

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-12  Score=68.90  Aligned_cols=39  Identities=28%  Similarity=0.568  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTGEKP   40 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHT-TTTTSCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCC
Confidence            46788999999999999999999999999999 8998886

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.23  E-value=1.6e-12  Score=68.94  Aligned_cols=39  Identities=31%  Similarity=0.518  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTGEKP   40 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHH-HHSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHH-HcCCCCC
Confidence            46788999999999999999999999999999 8998886

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-12  Score=67.71  Aligned_cols=38  Identities=24%  Similarity=0.420  Sum_probs=35.2

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   39 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGP   39 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-HHHSCCS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-HcCCCCC
Confidence            5678999999999999999999999999999 8888886

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=67.95  Aligned_cols=39  Identities=26%  Similarity=0.390  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQR-IHRGEKP   40 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHG-GGCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHh-HhCCCCC
Confidence            36778999999999999999999999999999 7998886

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.4e-12  Score=67.54  Aligned_cols=38  Identities=32%  Similarity=0.558  Sum_probs=35.0

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++||+.|.+.+.|.+|++ .|++++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   38 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKP   38 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHH-HHTSSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            4678999999999999999999999999999 7888886

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.23  E-value=2.5e-12  Score=68.19  Aligned_cols=39  Identities=33%  Similarity=0.508  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQR-IHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHH-HHTTSCS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 7998886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.6e-12  Score=66.04  Aligned_cols=37  Identities=27%  Similarity=0.476  Sum_probs=32.2

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER   39 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCC
Confidence            4489999999999999999999999998888877433

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.7e-12  Score=66.15  Aligned_cols=37  Identities=24%  Similarity=0.328  Sum_probs=32.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK   39 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCC
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCC
Confidence            3489999999999999999999999999988887333

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-12  Score=68.88  Aligned_cols=39  Identities=38%  Similarity=0.657  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQETL   40 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHH-HHSSCCS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHH-HhCCCCC
Confidence            46788999999999999999999999999999 7888886

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.5e-12  Score=68.16  Aligned_cols=39  Identities=28%  Similarity=0.425  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKP   40 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHT-TTSCCCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 8998887

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.3e-12  Score=66.05  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=32.3

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK   39 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCC
Confidence            4489999999999999999999999999988887433

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.9e-12  Score=67.29  Aligned_cols=38  Identities=26%  Similarity=0.492  Sum_probs=35.2

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   39 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGP   39 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSCCSS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-hcCCCCC
Confidence            5678999999999999999999999999999 8998886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.8e-12  Score=65.91  Aligned_cols=36  Identities=25%  Similarity=0.408  Sum_probs=31.8

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK   39 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCC
Confidence            389999999999999999999999999988887333

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.2e-12  Score=67.67  Aligned_cols=39  Identities=31%  Similarity=0.453  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHH-HHSCCCT
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHH-HhCCCCC
Confidence            36788999999999999999999999999999 8998886

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=67.85  Aligned_cols=39  Identities=33%  Similarity=0.480  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA-THSGEKP   40 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHH-HHCCCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.8e-12  Score=68.72  Aligned_cols=39  Identities=33%  Similarity=0.533  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERH   40 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHH-HHTCCCB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHH-HcCCCCC
Confidence            46788999999999999999999999999999 7888876

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.5e-12  Score=66.02  Aligned_cols=36  Identities=22%  Similarity=0.312  Sum_probs=31.7

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK   39 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCC
Confidence            389999999999999999999999999988887433

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=67.70  Aligned_cols=39  Identities=26%  Similarity=0.502  Sum_probs=35.8

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSG   40 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHT-TSSSSCS
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHH-HcCCCCC
Confidence            36788999999999999999999999999999 8988876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.22  E-value=3e-12  Score=67.80  Aligned_cols=39  Identities=28%  Similarity=0.421  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGG-GSSSCCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHH-HhCCCCC
Confidence            46778999999999999999999999999999 8999887

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.1e-12  Score=67.00  Aligned_cols=39  Identities=38%  Similarity=0.556  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESG   40 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHH-HTTTSSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 7988886

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.9e-12  Score=67.92  Aligned_cols=38  Identities=29%  Similarity=0.402  Sum_probs=35.5

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTGEKP   40 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGG-GTSCSSC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHH-HhCCCCC
Confidence            6778999999999999999999999999999 8888886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=68.06  Aligned_cols=38  Identities=29%  Similarity=0.547  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERS   40 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH-HCSSCCS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCC
Confidence            5678999999999999999999999999999 8998886

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8.3e-12  Score=66.10  Aligned_cols=37  Identities=22%  Similarity=0.335  Sum_probs=32.2

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK   39 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCC
Confidence            4589999999999999999999999999988887433

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=68.00  Aligned_cols=39  Identities=31%  Similarity=0.485  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-TTTTSSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHH-hhCCCCC
Confidence            36778999999999999999999999999999 8998886

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=67.79  Aligned_cols=39  Identities=28%  Similarity=0.479  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR-THAGEKP   40 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHH-HHTTSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHH-HcCCCCC
Confidence            46778999999999999999999999999999 7998886

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.5e-12  Score=68.18  Aligned_cols=39  Identities=26%  Similarity=0.485  Sum_probs=35.8

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++||+.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKS   40 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHH-HHHSTTS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHH-HHcCCCC
Confidence            46788999999999999999999999999999 7888876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.21  E-value=3.5e-12  Score=67.56  Aligned_cols=39  Identities=31%  Similarity=0.458  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTGEKP   40 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHT-GGGCCCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHH-hcCCCCC
Confidence            46788999999999999999999999999999 7888886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=67.54  Aligned_cols=39  Identities=31%  Similarity=0.443  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p   40 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKP   40 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGG-GTSSCCS
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHH-hcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.5e-12  Score=67.55  Aligned_cols=39  Identities=33%  Similarity=0.555  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   40 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-THTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHH-HHCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 7998886

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.1e-11  Score=65.62  Aligned_cols=37  Identities=24%  Similarity=0.305  Sum_probs=31.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK   39 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence            3489999999999999999999999998888777333

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.7e-12  Score=67.43  Aligned_cols=39  Identities=33%  Similarity=0.455  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++||+.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKH   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHH-HCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCCCCC
Confidence            46778999999999999999999999999999 7998886

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.21  E-value=3.2e-12  Score=67.72  Aligned_cols=38  Identities=37%  Similarity=0.524  Sum_probs=35.5

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHH-HHSCCSS
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHH-HcCCCCC
Confidence            6778999999999999999999999999999 7998886

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.1e-12  Score=67.77  Aligned_cols=39  Identities=31%  Similarity=0.495  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IHTGEKP   40 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG-GTSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhh-hcCCCCC
Confidence            36778999999999999999999999999999 8998887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4e-12  Score=67.32  Aligned_cols=39  Identities=28%  Similarity=0.485  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKP   40 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHH-TTSSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            46788999999999999999999999999999 8998886

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.21  E-value=1e-11  Score=61.66  Aligned_cols=35  Identities=17%  Similarity=0.371  Sum_probs=32.8

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIR-EVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHH-HTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHH-HHcCCCC
Confidence            4789999999999999999999999999 8999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=67.59  Aligned_cols=39  Identities=33%  Similarity=0.497  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKP   40 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHh-hcCCCCC
Confidence            36778999999999999999999999999999 7998886

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.5e-12  Score=67.10  Aligned_cols=39  Identities=33%  Similarity=0.508  Sum_probs=36.2

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTGEKP   40 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGG-GGSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            47788999999999999999999999999999 8998886

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=67.59  Aligned_cols=39  Identities=31%  Similarity=0.460  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTGEKP   40 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHT-TTCCCCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8998887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.20  E-value=3.2e-12  Score=67.69  Aligned_cols=39  Identities=26%  Similarity=0.351  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   40 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKP   40 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG-GGSSSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 7998886

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.6e-12  Score=67.52  Aligned_cols=39  Identities=31%  Similarity=0.491  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKP   40 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG-GGTTCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHH-hcCCCCC
Confidence            46778999999999999999999999999999 8998886

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=67.50  Aligned_cols=39  Identities=31%  Similarity=0.475  Sum_probs=36.1

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   40 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTGVKP   40 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHG-GGSCCCS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHH-HcCCCCC
Confidence            46778999999999999999999999999999 8998886

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.1e-12  Score=67.77  Aligned_cols=39  Identities=31%  Similarity=0.490  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKP   40 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG-GGCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            46778999999999999999999999999999 8998886

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4e-12  Score=67.31  Aligned_cols=38  Identities=32%  Similarity=0.484  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VHTGEKP   40 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGG-GGTTCCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHH-HhCCCCC
Confidence            6678999999999999999999999999999 8998886

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.1e-12  Score=67.78  Aligned_cols=39  Identities=31%  Similarity=0.479  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHH-HHHCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHH-HcCCCCC
Confidence            46788999999999999999999999999999 7888876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=68.09  Aligned_cols=39  Identities=31%  Similarity=0.433  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERH   40 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH-HHSCCSS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHH-hcCCCCC
Confidence            46788999999999999999999999999999 8888876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.20  E-value=1.2e-11  Score=61.49  Aligned_cols=35  Identities=29%  Similarity=0.656  Sum_probs=32.9

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLK-VHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHG-GGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            4789999999999999999999999999 8999887

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1e-11  Score=65.68  Aligned_cols=36  Identities=22%  Similarity=0.311  Sum_probs=31.8

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK   39 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCS
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCC
Confidence            389999999999999999999999999988887433

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.6e-12  Score=67.45  Aligned_cols=39  Identities=31%  Similarity=0.457  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENP   40 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG-GGSSSCC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHH-HhCCCCC
Confidence            46778999999999999999999999999999 7998886

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.9e-12  Score=66.93  Aligned_cols=39  Identities=26%  Similarity=0.448  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTGEKP   40 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHG-GGCCCSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHH-hcCCCCC
Confidence            46788999999999999999999999999999 8998886

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=67.51  Aligned_cols=39  Identities=31%  Similarity=0.413  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKP   40 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT-TTSSSCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3e-12  Score=67.84  Aligned_cols=39  Identities=28%  Similarity=0.531  Sum_probs=35.8

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTGEKP   40 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHH-HHHCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHH-hcCCCCC
Confidence            46788999999999999999999999999999 7888876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=4.5e-12  Score=67.08  Aligned_cols=39  Identities=31%  Similarity=0.473  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VHSGEKP   40 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGG-GGTSCCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHH-HhCCCCC
Confidence            36788999999999999999999999999999 7998886

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.6e-12  Score=68.11  Aligned_cols=39  Identities=26%  Similarity=0.299  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKP   40 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSCSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCCCCC
Confidence            46788999999999999999999999999999 7998886

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=65.56  Aligned_cols=36  Identities=22%  Similarity=0.285  Sum_probs=31.6

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE   38 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCC
Confidence            348999999999999999999999999888877733

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=65.56  Aligned_cols=37  Identities=19%  Similarity=0.279  Sum_probs=32.2

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET   39 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCC
Confidence            3489999999999999999999999999988887433

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=67.57  Aligned_cols=39  Identities=26%  Similarity=0.394  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSGEKP   40 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHH-HCCSSSC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHH-hcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=67.32  Aligned_cols=39  Identities=38%  Similarity=0.577  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKP   40 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCSSSS
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 8998886

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=67.55  Aligned_cols=39  Identities=33%  Similarity=0.507  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKP   40 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHH-HTTCCCS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHH-HcCCCCC
Confidence            46778999999999999999999999999999 8998886

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=65.46  Aligned_cols=37  Identities=22%  Similarity=0.276  Sum_probs=32.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK   39 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCC
Confidence            3489999999999999999999999998888887333

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.8e-12  Score=67.17  Aligned_cols=39  Identities=36%  Similarity=0.438  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESG   40 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT-TTCCSSS
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh-hcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.1e-12  Score=67.33  Aligned_cols=38  Identities=24%  Similarity=0.310  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   40 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VHMGEKT   40 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG-GGGSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHH-hcCCCCC
Confidence            5678999999999999999999999999999 8888886

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=67.47  Aligned_cols=39  Identities=26%  Similarity=0.455  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERP   40 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-TTSCCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 8998886

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.4e-12  Score=66.52  Aligned_cols=39  Identities=26%  Similarity=0.381  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK-THAAKSG   40 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG-GGCCCCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8999886

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=67.41  Aligned_cols=39  Identities=31%  Similarity=0.428  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IHTGENP   40 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT-TTTTSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 7998886

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=67.14  Aligned_cols=38  Identities=34%  Similarity=0.518  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTGEKP   40 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHH-HHCCCCS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHH-HhCCCCC
Confidence            6778999999999999999999999999999 8998886

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4e-12  Score=67.37  Aligned_cols=38  Identities=32%  Similarity=0.521  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKP   40 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT-TTCCSCS
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHH-HhCCCCC
Confidence            6678999999999999999999999999999 7998886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=67.64  Aligned_cols=38  Identities=37%  Similarity=0.542  Sum_probs=35.3

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSGERP   40 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTT-TTTSCCS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHH-hcCCCCC
Confidence            5678999999999999999999999999999 8998886

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=67.22  Aligned_cols=39  Identities=31%  Similarity=0.524  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTGEKP   40 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHH-HHSSSSC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHH-HHCCCCC
Confidence            36778999999999999999999999999999 8898886

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.2e-12  Score=67.73  Aligned_cols=39  Identities=31%  Similarity=0.475  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKP   40 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT-TTSCSCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhH-hcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=67.13  Aligned_cols=39  Identities=26%  Similarity=0.431  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTGYRP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHH-HHTCCCS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=67.20  Aligned_cols=39  Identities=33%  Similarity=0.523  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHT-TTSSCCS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=67.29  Aligned_cols=39  Identities=31%  Similarity=0.474  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp   40 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-IHTGEKP   40 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHH-HHHSCCC
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHH-hcCCCCC
Confidence            36788999999999999999999999999999 7888886

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.1e-12  Score=67.26  Aligned_cols=38  Identities=37%  Similarity=0.589  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKP   40 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT-TTTTCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHH-HhCCCCC
Confidence            6778999999999999999999999999999 8988886

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=65.34  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=31.7

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE   38 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            348999999999999999999999999998888733

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.4e-12  Score=66.96  Aligned_cols=39  Identities=21%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   40 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHTRKSG   40 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHH-HHCCCCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 8998886

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=3.9e-12  Score=67.32  Aligned_cols=39  Identities=26%  Similarity=0.332  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR-VHMGEKC   40 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHT-TTCCSCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHH-HhCCCCC
Confidence            46778999999999999999999999999999 8998886

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.3e-12  Score=67.23  Aligned_cols=39  Identities=33%  Similarity=0.469  Sum_probs=35.8

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHTGEKP   40 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH-HHTSSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 8998886

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.8e-12  Score=66.99  Aligned_cols=38  Identities=18%  Similarity=0.301  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQV-LHMGQKN   40 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHH-HHSCCSC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHH-HhCCCCC
Confidence            6778999999999999999999999999999 8998886

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.3e-12  Score=67.66  Aligned_cols=39  Identities=31%  Similarity=0.491  Sum_probs=35.8

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTGGKP   40 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTH-HHHSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHH-hcCCCCC
Confidence            36778999999999999999999999999999 8888886

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5e-12  Score=66.94  Aligned_cols=38  Identities=39%  Similarity=0.622  Sum_probs=35.4

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKP   40 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHH-HSCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHH-HhCCCCC
Confidence            5678999999999999999999999999999 8998886

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.8e-12  Score=65.10  Aligned_cols=38  Identities=18%  Similarity=0.291  Sum_probs=33.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|+++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG   40 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            34899999999999999999999999999888875444

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.4e-11  Score=65.23  Aligned_cols=37  Identities=30%  Similarity=0.364  Sum_probs=32.3

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK   39 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3489999999999999999999999999988887433

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.7e-12  Score=67.46  Aligned_cols=39  Identities=31%  Similarity=0.445  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKP   40 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-TTCCSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHH-HhCCCCC
Confidence            46778999999999999999999999999999 8998886

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.2e-12  Score=67.25  Aligned_cols=39  Identities=33%  Similarity=0.474  Sum_probs=36.0

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGG-GGSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            46778999999999999999999999999999 8998886

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=9.6e-12  Score=65.85  Aligned_cols=35  Identities=20%  Similarity=0.220  Sum_probs=31.4

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      |+++|.+++||+|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTR   37 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCC
Confidence            44899999999999999999999999999888874

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=4.8e-12  Score=67.03  Aligned_cols=38  Identities=26%  Similarity=0.308  Sum_probs=35.2

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCC-CCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ-ESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|..|++ .|++ ++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~   41 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKS   41 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTT
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCC
Confidence            6678999999999999999999999999999 8888 876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5e-12  Score=66.95  Aligned_cols=39  Identities=31%  Similarity=0.451  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKP   40 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHH-HcCCCCC
Confidence            36778999999999999999999999999999 7998886

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=65.47  Aligned_cols=34  Identities=26%  Similarity=0.330  Sum_probs=30.7

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG   37 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC
Confidence            3899999999999999999999999988887773

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.1e-12  Score=67.22  Aligned_cols=39  Identities=33%  Similarity=0.511  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTGEKP   40 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT-TTTTCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCC
Confidence            46788999999999999999999999999999 7888886

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.5e-12  Score=67.57  Aligned_cols=39  Identities=31%  Similarity=0.577  Sum_probs=35.5

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   40 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHH-HHHHSCC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 7888776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=65.05  Aligned_cols=37  Identities=22%  Similarity=0.264  Sum_probs=32.4

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK   39 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTT
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCC
Confidence            3489999999999999999999999999988887433

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.6e-12  Score=67.06  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=35.5

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTGERP   40 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHT-TSCSCCS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHH-hhCCCCC
Confidence            6778999999999999999999999999999 8998886

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.17  E-value=7.3e-12  Score=66.32  Aligned_cols=38  Identities=26%  Similarity=0.455  Sum_probs=35.3

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKP   40 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSSC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            5678999999999999999999999999999 8998886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.6e-12  Score=67.05  Aligned_cols=39  Identities=26%  Similarity=0.435  Sum_probs=35.9

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKP   40 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHT-TSCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 8998886

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.5e-12  Score=66.82  Aligned_cols=38  Identities=34%  Similarity=0.602  Sum_probs=35.2

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSGEKP   40 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-GSCCSCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCC
Confidence            5678999999999999999999999999999 8998886

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.4e-11  Score=63.65  Aligned_cols=38  Identities=16%  Similarity=0.207  Sum_probs=33.0

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG   40 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC
Confidence            34899999999999999999999999999888885444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-12  Score=67.04  Aligned_cols=38  Identities=34%  Similarity=0.565  Sum_probs=35.1

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTGQRP   40 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHH-HHHSCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHH-HcCCCCC
Confidence            5678999999999999999999999999999 7888876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.9e-11  Score=63.99  Aligned_cols=36  Identities=28%  Similarity=0.361  Sum_probs=31.6

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK   39 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCC
Confidence            478999999999999999999999999988887433

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.9e-11  Score=63.34  Aligned_cols=39  Identities=21%  Similarity=0.380  Sum_probs=35.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |+++|.+++||+|++|++.|.....|..|+++|++++||
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            448999999999999999999999999999999876665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4e-12  Score=67.38  Aligned_cols=39  Identities=33%  Similarity=0.542  Sum_probs=35.6

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKS   40 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH-HHHHTTC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            36778999999999999999999999999999 7888876

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=64.06  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=33.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG   40 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC
Confidence            34899999999999999999999999999888885444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.16  E-value=2.7e-11  Score=62.73  Aligned_cols=38  Identities=24%  Similarity=0.277  Sum_probs=33.0

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCC
Confidence            38899999999999999999999999998888854443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=64.43  Aligned_cols=36  Identities=31%  Similarity=0.409  Sum_probs=31.3

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK   39 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCC
Confidence            378999999999999999999999998888777433

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7e-12  Score=66.58  Aligned_cols=39  Identities=28%  Similarity=0.540  Sum_probs=35.5

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++..|++++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~   41 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP   41 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence            677899999999999999999999999999866888876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.16  E-value=1.9e-11  Score=78.76  Aligned_cols=57  Identities=21%  Similarity=0.149  Sum_probs=52.4

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      ....+|.|+.|++.|.....|..|+        ++|  ++||+|++||+.|.....|..|+++|++.
T Consensus        70 ~~~~~~~C~~C~k~f~~~~~l~~H~--------~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           70 KAISQFVCPLCLMPFSSSVSLKQHI--------RYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHCSEECTTTCCEESSHHHHHHHH--------HHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHH--------HHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3357899999999999999999999        888  78999999999999999999999999865

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.3e-11  Score=62.31  Aligned_cols=38  Identities=13%  Similarity=0.137  Sum_probs=33.0

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +++|.+++||+|++|++.|.....|..|+++|++++||
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            38899999999999999999999999998888855443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.4e-11  Score=64.70  Aligned_cols=44  Identities=20%  Similarity=0.271  Sum_probs=37.9

Q ss_pred             hhccCCCCCccccc--ccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcC
Q psy13210         72 MIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVC  132 (155)
Q Consensus        72 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C  132 (155)
                      +.++|.++++|+|.  .|++.|.....|..|+++|+                 +++||.|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~-----------------~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS-----------------GVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC-----------------CCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC-----------------CCCCCCCCCC
Confidence            34889999999998  89999999999888887776                 7778888877

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.7e-11  Score=64.14  Aligned_cols=37  Identities=27%  Similarity=0.347  Sum_probs=32.7

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      +++|.++++|+|++||+.|.....|..|+++|++++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG   40 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC
Confidence            3899999999999999999999999999888875444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.1e-12  Score=73.94  Aligned_cols=60  Identities=22%  Similarity=0.244  Sum_probs=51.6

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +++...+++.|+.|++.|. ...|..|+ .|.                 +++||.|+.|++.|. ...|..|++ .|.++
T Consensus        10 ~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c-----------------~~~~~~C~~C~~~~~-~~~l~~H~~-~c~~~   68 (75)
T 2d9k_A           10 ETECPLRLAVCQHCDLELS-ILKLKEHE-DYC-----------------GARTELCGNCGRNVL-VKDLKTHPE-VCGRE   68 (75)
T ss_dssp             CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH-----------------HHCEEECSSSCCEEE-TTGGGTHHH-HBTTB
T ss_pred             cccCCCcccCCcccChHhh-HHHHHHHH-hHc-----------------CCCceEcccCCCcCc-HHHHHHHHH-HccCC
Confidence            8999999999999999994 77777776 666                 788899999999988 599999999 77765


Q ss_pred             C
Q psy13210        154 S  154 (155)
Q Consensus       154 ~  154 (155)
                      +
T Consensus        69 ~   69 (75)
T 2d9k_A           69 G   69 (75)
T ss_dssp             S
T ss_pred             c
Confidence            4

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.1e-11  Score=63.12  Aligned_cols=39  Identities=26%  Similarity=0.384  Sum_probs=34.8

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |+++|.++++|+|++||+.|.....|..|+++|++++||
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            348999999999999999999999999999999866665

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=7.8e-12  Score=65.57  Aligned_cols=38  Identities=21%  Similarity=0.254  Sum_probs=35.0

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA-LHAGESG   40 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH-HHTTSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH-HHCCCCC
Confidence            4677899999999999999999999999999 8998886

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.4e-12  Score=66.29  Aligned_cols=38  Identities=29%  Similarity=0.485  Sum_probs=35.1

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~   40 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKL   40 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHH-HHHCCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHH-HHcCCCC
Confidence            5678999999999999999999999999999 7888876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.15  E-value=1.1e-11  Score=62.46  Aligned_cols=36  Identities=31%  Similarity=0.466  Sum_probs=32.8

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHH-HhccC
Confidence            5678999999999999999999999999999 77764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.2e-11  Score=63.19  Aligned_cols=39  Identities=18%  Similarity=0.155  Sum_probs=35.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            348999999999999999999999999999999877665

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.6e-11  Score=62.50  Aligned_cols=36  Identities=19%  Similarity=0.391  Sum_probs=33.6

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   38 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGP   38 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGG-GCCCCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHH-HhCCCCC
Confidence            46889999999999999999999999999 8999887

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=5.7e-11  Score=61.91  Aligned_cols=35  Identities=17%  Similarity=0.296  Sum_probs=30.5

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   37 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDK   37 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTT
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCC
Confidence            57888999999999999999999999988887433

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.5e-11  Score=64.13  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=31.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK   39 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCC
Confidence            3489999999999999999999999998888777333

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.9e-11  Score=62.79  Aligned_cols=39  Identities=15%  Similarity=0.192  Sum_probs=34.1

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGP   41 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCT
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            448999999999999999999999999999888855544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.12  E-value=4.9e-11  Score=61.65  Aligned_cols=38  Identities=16%  Similarity=0.253  Sum_probs=34.0

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +++|.++++|+|++||+.|.....|..|+++|++++||
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            48899999999999999999999999999988866654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=2.1e-11  Score=70.68  Aligned_cols=56  Identities=23%  Similarity=0.254  Sum_probs=50.7

Q ss_pred             cccChhhhhh--hhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccc--cccccccHHHHHHHHhHh
Q psy13210         41 IDISADRLER--LRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        41 ~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  104 (155)
                      .....+.|..  |++.|.....|..|+        ++|.++++|+|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~--------~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHT--------RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHH--------HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHH--------HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3446788988  999999999999999        9999999999975  999999999999998875

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.2e-11  Score=62.65  Aligned_cols=39  Identities=21%  Similarity=0.239  Sum_probs=33.6

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |+++|.+++||+|++|++.|.....|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            338999999999999999999999999998888855543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=4.8e-11  Score=68.14  Aligned_cols=35  Identities=20%  Similarity=0.429  Sum_probs=31.8

Q ss_pred             ccCCCCeecCc--CcccccCchHHHHHHhhhhCCCCC
Q psy13210        121 HTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       121 h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .+|++||.|++  |+++|.+.+.|.+|+++.|+++||
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP   58 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   58 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence            56999999976  999999999999998558999998

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.11  E-value=5.1e-11  Score=60.71  Aligned_cols=34  Identities=18%  Similarity=0.412  Sum_probs=31.4

Q ss_pred             ccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        121 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       121 h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |++++||.|++||+.|.+.+.|..|++ .|++++|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   34 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMN-VHRRDRA   34 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHH-TTCCSCT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHH-HcCCCcc
Confidence            678999999999999999999999999 8999887

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.2e-11  Score=62.02  Aligned_cols=38  Identities=24%  Similarity=0.431  Sum_probs=34.6

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +++|.+++||+|++|++.|.....|..|+++|++++||
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            38899999999999999999999999999999877665

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.7e-11  Score=63.11  Aligned_cols=37  Identities=19%  Similarity=0.299  Sum_probs=32.4

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      +++|.+++||+|++|++.|.....|..|+++|++++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH   40 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC
Confidence            3899999999999999999999999999888874443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.6e-11  Score=62.90  Aligned_cols=39  Identities=15%  Similarity=0.152  Sum_probs=34.3

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |+++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            448999999999999999999999999999988855554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.4e-11  Score=63.94  Aligned_cols=37  Identities=32%  Similarity=0.545  Sum_probs=34.0

Q ss_pred             HHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        118 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQR-IHTGEKS   40 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHT-TTSSCCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHH-HhCCCCC
Confidence            356889999999999999999999999999 8998886

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.9e-11  Score=63.46  Aligned_cols=37  Identities=30%  Similarity=0.453  Sum_probs=34.2

Q ss_pred             HHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        118 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~   40 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRR-IHTGEKP   40 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHH-HHSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHH-HhCCCCC
Confidence            457899999999999999999999999999 8999887

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=6.6e-11  Score=61.66  Aligned_cols=36  Identities=17%  Similarity=0.285  Sum_probs=33.4

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   38 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTL-QTHSDKS   38 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHH-HHTCTTC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHH-hhCCCCC
Confidence            36889999999999999999999999999 8988886

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=63.24  Aligned_cols=37  Identities=38%  Similarity=0.522  Sum_probs=34.2

Q ss_pred             HHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        118 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTGEKP   40 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHT-TTSSSCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHH-HhCCCCC
Confidence            457899999999999999999999999999 8998886

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.5e-10  Score=58.08  Aligned_cols=36  Identities=19%  Similarity=0.323  Sum_probs=33.6

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      ++|.++++|+|++||+.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            678899999999999999999999999999998775

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5e-11  Score=60.09  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=31.0

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHH-HhhhhCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQH-LRRTHGQE  153 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~~H~~~  153 (155)
                      ++|++++||.|++|++.|.+.+.|..| ++ .|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQ-KHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHH-HTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHH-HccCc
Confidence            468999999999999999999999999 77 78775

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=8.4e-11  Score=59.08  Aligned_cols=35  Identities=20%  Similarity=0.443  Sum_probs=31.8

Q ss_pred             HhccCCCCeecCcCcccccCc-hHHHHHHhhhhCCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATY-SGAYQHLRRTHGQES  154 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~-~~L~~H~~~~H~~~~  154 (155)
                      ++|++++||.|++|++.|.+. +.|.+|++ .|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~-~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIW-AHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHH-hcCCCC
Confidence            468899999999999999999 99999999 788765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.5e-10  Score=57.69  Aligned_cols=34  Identities=32%  Similarity=0.503  Sum_probs=31.4

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +|++++||.|++|++.|.+.+.|..|++ .|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLR-KHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHH-HHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHH-HccCCC
Confidence            5889999999999999999999999999 788775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.9e-11  Score=62.40  Aligned_cols=37  Identities=19%  Similarity=0.281  Sum_probs=32.5

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      +++|.++++|+|++|++.|.....|..|+++|++++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP   40 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC
Confidence            3899999999999999999999999999888874443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.2e-10  Score=58.13  Aligned_cols=34  Identities=18%  Similarity=0.421  Sum_probs=31.4

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|++++||.|++|++.|.+.+.|.+|++ .|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHML-VHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHT-TTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHH-HhcCCC
Confidence            5789999999999999999999999999 788875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.9e-10  Score=58.48  Aligned_cols=33  Identities=18%  Similarity=0.225  Sum_probs=30.0

Q ss_pred             hccCCCCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        120 KHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       120 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      .+++++||.|++  |+++|.+.+.|.+|++ .|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r-~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLK-VHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHH-HHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence            467999999987  9999999999999999 78875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.9e-10  Score=59.14  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=33.2

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      ++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            6788999999999999999999999999988866655

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.5e-10  Score=57.76  Aligned_cols=34  Identities=29%  Similarity=0.553  Sum_probs=31.4

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|++++||.|++|++.|.+.+.|..|++ .|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMN-RHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHH-HSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHH-HhccCC
Confidence            5889999999999999999999999999 788765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.02  E-value=1.4e-10  Score=62.00  Aligned_cols=35  Identities=23%  Similarity=0.498  Sum_probs=29.8

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +|++++||.|.+|++.|.+.+.|.+|++..|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            58899999999999999999999999995677654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.9e-11  Score=63.04  Aligned_cols=37  Identities=30%  Similarity=0.462  Sum_probs=33.8

Q ss_pred             HHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        118 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +++|++++||.|++|++.|.+.+.|.+|++ .|++++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~   40 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWI-THTREKP   40 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHT-HHHHCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            457899999999999999999999999999 7888876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.9e-12  Score=75.08  Aligned_cols=59  Identities=12%  Similarity=0.138  Sum_probs=49.6

Q ss_pred             ccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhc
Q psy13210         42 DISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKH  121 (155)
Q Consensus        42 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h  121 (155)
                      ...+|.|+.|++.|.....|..               +++|+|++||+.|.....|..|+++|+                
T Consensus        15 ~~~~~~C~~C~k~f~~~~~l~~---------------~~~~~C~~C~~~f~~~~~l~~H~~~H~----------------   63 (73)
T 2ctu_A           15 GDRSQKCSKCGIIFIRRSTLSR---------------RKTPMCEKCRKDSCQEAALNKDEGNES----------------   63 (73)
T ss_dssp             CCSEEECSSSCCEEECCCCCCC---------------SSSCCCHHHHHTCSCCCSSCCCSSCCC----------------
T ss_pred             CCCCeeCCcccchhCCHHHhCc---------------CCCCCCCCCChhhcCHHHHHHHHHhhc----------------
Confidence            3467999999999998766544               578999999999999999998888776                


Q ss_pred             cCCCCeecCcC
Q psy13210        122 TGRKPFKCVVC  132 (155)
Q Consensus       122 ~~~~~~~C~~C  132 (155)
                       +++||.|++|
T Consensus        64 -~~~~~~C~~C   73 (73)
T 2ctu_A           64 -GKKTSGPSSG   73 (73)
T ss_dssp             -CCCCSSCCCC
T ss_pred             -CCCCCCCCCC
Confidence             6777888887

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.3e-10  Score=56.97  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=31.4

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +|++++||.|++|++.|.+.+.|.+|++ .|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKL-LHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHH-HHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHH-HhcCCC
Confidence            4789999999999999999999999999 788875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.00  E-value=3.4e-10  Score=56.71  Aligned_cols=36  Identities=19%  Similarity=0.166  Sum_probs=32.9

Q ss_pred             hhccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         72 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        72 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |+++|.+++||+|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            348999999999999999999999999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.1e-10  Score=60.19  Aligned_cols=35  Identities=29%  Similarity=0.526  Sum_probs=32.7

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +|++++||.|++|++.|...+.|.+|++ .|++++|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~   38 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVG   38 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHH-HHSCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHH-HccCCCC
Confidence            5889999999999999999999999999 7888876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=1.3e-10  Score=63.64  Aligned_cols=45  Identities=7%  Similarity=-0.091  Sum_probs=40.9

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhc-cCCCCCccccccccccccc
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIR-TDPFRHKFVCYACDYFSYN   93 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~-~~~~~~~~~C~~C~~~f~~   93 (155)
                      ....+|.|+.|++.|.....|..|+        + +|.++++|+|++|++.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~--------~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHI--------KQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHH--------HHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHH--------HHhcCCCCCccCCCCCCCCCC
Confidence            3446799999999999999999998        7 9999999999999999975

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.98  E-value=4.7e-10  Score=55.38  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=31.8

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      +|.++++|+|++|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            46788999999999999999999999999998765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.98  E-value=3.6e-10  Score=57.45  Aligned_cols=35  Identities=11%  Similarity=0.239  Sum_probs=30.8

Q ss_pred             CCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         76 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        76 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |.++++|+|++||+.|.....|..|+++|++++||
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            45678999999999999999999999999987776

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.97  E-value=5.1e-10  Score=55.35  Aligned_cols=35  Identities=20%  Similarity=0.277  Sum_probs=31.8

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      +|.++++|+|++|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            46788999999999999999999999999998765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=4.9e-10  Score=55.82  Aligned_cols=34  Identities=29%  Similarity=0.515  Sum_probs=31.1

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|++++||.|++|++.|.+.+.|..|++ .|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLR-IHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHH-HHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHH-HhCCCC
Confidence            4788999999999999999999999999 788765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=3.8e-10  Score=56.91  Aligned_cols=34  Identities=26%  Similarity=0.373  Sum_probs=31.3

Q ss_pred             ccCCCCeecC--cCcccccCchHHHHHHhhhhCCCCC
Q psy13210        121 HTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       121 h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |++++||.|+  .|++.|.+.+.|.+|++ .|++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHH-HHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence            6789999999  59999999999999999 8888886

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.93  E-value=5.8e-10  Score=54.62  Aligned_cols=30  Identities=20%  Similarity=0.317  Sum_probs=28.3

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +||.|++||+.|.+.+.|..|++ .|++++|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~-~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHIT-LHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHH-HHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHH-HhCCCCC
Confidence            58999999999999999999999 8999886

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.92  E-value=1e-09  Score=53.74  Aligned_cols=31  Identities=23%  Similarity=0.237  Sum_probs=28.7

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +||.|++||+.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5799999999999999999999999988876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3e-10  Score=60.34  Aligned_cols=38  Identities=29%  Similarity=0.431  Sum_probs=34.4

Q ss_pred             HHHhccCCCCeecC--cCcccccCchHHHHHHhhhhCCCCC
Q psy13210        117 HYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       117 H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |.++|++++||.|.  .|++.|.+.+.|.+|++ .|++++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~   42 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKP   42 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCCCCS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCCCCC
Confidence            34678999999998  89999999999999999 8998886

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=9.1e-10  Score=55.15  Aligned_cols=35  Identities=23%  Similarity=0.475  Sum_probs=32.2

Q ss_pred             ccCCCCCcccccccccccccH-HHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNI-GCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  108 (155)
                      ++|.++++|+|++|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            678899999999999999999 99999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=9.4e-10  Score=54.74  Aligned_cols=35  Identities=14%  Similarity=0.090  Sum_probs=31.8

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +.|.+++||+|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            56788999999999999999999999999998764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.6e-09  Score=53.83  Aligned_cols=35  Identities=31%  Similarity=0.558  Sum_probs=31.9

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .+|.+++||+|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            46888999999999999999999999999998764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=3.3e-11  Score=72.95  Aligned_cols=57  Identities=11%  Similarity=0.098  Sum_probs=44.4

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ++|.++++|+|++|++.|.....|..|+++|+                 +++||.|..|.    ....|..|.+ .|.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht-----------------~ekp~~C~~~~----~~~~~~~~~~-~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN-----------------EEFQKRAKRQE----RRKQLLSKQK-YADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHH-----------------HHHHHHCCCCS----CCCCCCCCCC-CCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC-----------------CCCCcccchhh----hHHHHHhhhc-cccc
Confidence            67899999999999999999999998888887                 56677886654    4455556666 4554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.89  E-value=9.6e-10  Score=55.20  Aligned_cols=34  Identities=26%  Similarity=0.444  Sum_probs=30.5

Q ss_pred             hccCCCCeecCc--CcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|++++||.|++  |++.|.+.+.|.+|++ .|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLR-WHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHH-HHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCCCC
Confidence            378999999995  9999999999999999 788775

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.4e-09  Score=54.05  Aligned_cols=35  Identities=23%  Similarity=0.543  Sum_probs=31.9

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .+|.+++||+|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            56888999999999999999999999999998754

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=8e-10  Score=58.83  Aligned_cols=41  Identities=7%  Similarity=-0.092  Sum_probs=37.5

Q ss_pred             cccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCccccccccc
Q psy13210         41 IDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDY   89 (155)
Q Consensus        41 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~   89 (155)
                      ....+|.|+.|++.|.....|..|+        ++|.+++||+|++|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~--------~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHK--------LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHG--------GGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHH--------HhcCCCCCccCCCCCC
Confidence            3446799999999999999999999        9999999999999986

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.2e-09  Score=54.43  Aligned_cols=33  Identities=21%  Similarity=0.397  Sum_probs=30.1

Q ss_pred             cCCCCCcccccc--cccccccHHHHHHHHhHhcCC
Q psy13210         75 TDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        75 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      .+.+++||+|++  |++.|..++.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467889999986  999999999999999999975

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.6e-09  Score=53.00  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=31.7

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .+|.++++|+|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            46788899999999999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.7e-09  Score=54.21  Aligned_cols=34  Identities=26%  Similarity=0.648  Sum_probs=31.4

Q ss_pred             ccCCCCCcccccccccccccHHHHHHH-HhHhcCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGE  107 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  107 (155)
                      ++|.+++||+|+.||+.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            678899999999999999999999999 8889864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.84  E-value=2.6e-10  Score=60.56  Aligned_cols=38  Identities=26%  Similarity=0.539  Sum_probs=33.0

Q ss_pred             HHHHhccCCCCeecC--cCcccccCchHHHHHHhhhhCCCC
Q psy13210        116 NHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|..+|++++||.|+  .||+.|.+.+.|.+|++ .|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHH-HccCCC
Confidence            344568899999996  69999999999999999 788875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=3.2e-09  Score=53.40  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.8

Q ss_pred             CCCCCccccc--ccccccccHHHHHHHHhHhcCCCCc
Q psy13210         76 DPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        76 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      |.++++|+|+  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4578999999  5999999999999999999988886

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=4.7e-09  Score=52.11  Aligned_cols=34  Identities=26%  Similarity=0.438  Sum_probs=30.8

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .+.++++|+|++|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5678899999999999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.80  E-value=2.8e-10  Score=55.38  Aligned_cols=30  Identities=20%  Similarity=0.332  Sum_probs=28.2

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +||.|++||+.|.+.+.|.+|++ .|++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~-~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK-TAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT-SSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH-HHccCCC
Confidence            58999999999999999999999 8999887

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.79  E-value=3.8e-09  Score=49.88  Aligned_cols=30  Identities=30%  Similarity=0.688  Sum_probs=27.4

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      ++||.|++|++.|.+.+.|..|++ .|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLE-THDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-TTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH-HhccCC
Confidence            579999999999999999999999 788765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.78  E-value=4.4e-09  Score=52.65  Aligned_cols=32  Identities=19%  Similarity=0.196  Sum_probs=27.8

Q ss_pred             ccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        121 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       121 h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +.|++||.|++|||+|.+.+.|.+|+. .+-.+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p-y~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA-YYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH-HTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC-eECcC
Confidence            578999999999999999999999986 45443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.77  E-value=5.1e-09  Score=49.18  Aligned_cols=29  Identities=21%  Similarity=0.369  Sum_probs=26.6

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++||+.|.+.+.|..|++ .|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHIL-LHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHT-GGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHH-HhcCCC
Confidence            58999999999999999999999 788765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=6.6e-09  Score=59.31  Aligned_cols=35  Identities=14%  Similarity=0.121  Sum_probs=28.1

Q ss_pred             cCCCCCcccccc--cccccccHHHHHHHH-hHhcCCCC
Q psy13210         75 TDPFRHKFVCYA--CDYFSYNIGCMRSHI-RTHTGEKP  109 (155)
Q Consensus        75 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~  109 (155)
                      ...+++||+|+.  |++.|...++|.+|+ ++|++++|
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP   58 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   58 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence            346789999975  999999999999997 56774444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.74  E-value=6.7e-09  Score=49.00  Aligned_cols=30  Identities=23%  Similarity=0.394  Sum_probs=26.8

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      +||.|++|++.|.+.+.|..|++ .|.+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIK-TKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH-HHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-HHccCCC
Confidence            47999999999999999999999 6777665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.74  E-value=6.6e-09  Score=48.72  Aligned_cols=29  Identities=34%  Similarity=0.669  Sum_probs=26.5

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++|++.|.+.+.|..|++ .|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHH-HHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHH-HhcCCC
Confidence            58999999999999999999999 788765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.73  E-value=5.1e-09  Score=55.74  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=29.3

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHh-HhcCCCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKP  109 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  109 (155)
                      +|.++++|+|.+||+.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4778999999999999999999999999 8987653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.73  E-value=5.8e-10  Score=54.20  Aligned_cols=31  Identities=23%  Similarity=0.260  Sum_probs=28.2

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +||+|++||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4799999999999999999999999988876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=7.2e-09  Score=59.07  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=30.1

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .+.+++||.|.+|+|.|.+.+.|.+|++ .|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r-~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEA-QHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHH-HHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhh-hhCCCc
Confidence            3678999999999999999999999999 677654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.71  E-value=1.1e-08  Score=49.27  Aligned_cols=30  Identities=20%  Similarity=0.598  Sum_probs=27.4

Q ss_pred             CCCeecC--cCcccccCchHHHHHHhhhhCCCC
Q psy13210        124 RKPFKCV--VCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       124 ~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      ++||.|+  .|++.|.+.+.|..|++ .|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHH-HccCCC
Confidence            5799999  89999999999999999 788875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.70  E-value=8.5e-09  Score=48.28  Aligned_cols=29  Identities=38%  Similarity=0.678  Sum_probs=26.5

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++|++.|.+.+.|..|++ .|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLR-IHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHH-HHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHH-HhcCCC
Confidence            58999999999999999999999 787765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.69  E-value=9.9e-09  Score=47.80  Aligned_cols=28  Identities=29%  Similarity=0.609  Sum_probs=25.3

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ++||.|++|++.|.+.+.|..|++ .|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYR-VHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHT-TSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH-hcCC
Confidence            579999999999999999999999 6654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.69  E-value=1.1e-08  Score=47.27  Aligned_cols=27  Identities=48%  Similarity=0.914  Sum_probs=24.6

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      ++||.|++||+.|.+.+.|..|++ .|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~-~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLR-THG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHH-HCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHH-Hcc
Confidence            579999999999999999999999 664

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.68  E-value=8.5e-09  Score=48.22  Aligned_cols=29  Identities=28%  Similarity=0.496  Sum_probs=26.2

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++|++.|.+.+.|..|++ .|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLK-IHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHH-HHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHH-HhccCC
Confidence            58999999999999999999999 777764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.67  E-value=9.5e-09  Score=47.63  Aligned_cols=27  Identities=22%  Similarity=0.659  Sum_probs=24.5

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      ++||.|++||+.|.+.+.|.+|++ .|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMR-GHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHT-TCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHH-hcC
Confidence            579999999999999999999998 563

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.67  E-value=1.8e-08  Score=50.35  Aligned_cols=33  Identities=27%  Similarity=0.543  Sum_probs=29.7

Q ss_pred             CCCCCcccccc--cccccccHHHHHHHHhHhcCCC
Q psy13210         76 DPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        76 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |.++++|+|.+  ||+.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56789999995  9999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.67  E-value=1.4e-08  Score=48.58  Aligned_cols=29  Identities=34%  Similarity=0.661  Sum_probs=26.6

Q ss_pred             CCeecC--cCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCV--VCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|+  .||+.|.+.+.|..|++ .|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH-HhcCCC
Confidence            589998  99999999999999999 888875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.65  E-value=1.3e-08  Score=48.14  Aligned_cols=29  Identities=21%  Similarity=0.480  Sum_probs=26.1

Q ss_pred             CCeecCcCcccccCchHHHHH-HhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQH-LRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H-~~~~H~~~~  154 (155)
                      +||.|+.|++.|.+.+.|..| ++ .|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQK-IHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTT-TSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHH-HccCCC
Confidence            589999999999999999999 56 898875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=3e-09  Score=50.09  Aligned_cols=29  Identities=38%  Similarity=0.731  Sum_probs=26.3

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++||+.|.+.+.|..|++ .|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVR-QHTGEK   29 (29)
Confidence            58999999999999999999999 787764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.65  E-value=2.6e-08  Score=46.57  Aligned_cols=29  Identities=34%  Similarity=0.589  Sum_probs=26.2

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||+|++||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=1.8e-08  Score=47.39  Aligned_cols=30  Identities=20%  Similarity=0.318  Sum_probs=26.9

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ++||.|+.||+.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998754

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=3.1e-09  Score=50.33  Aligned_cols=30  Identities=33%  Similarity=0.692  Sum_probs=26.9

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      ++||.|+.||+.|.+.+.|..|++ .|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVR-IHTGEK   30 (30)
Confidence            478999999999999999999999 777764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.63  E-value=1.9e-08  Score=47.13  Aligned_cols=29  Identities=28%  Similarity=0.392  Sum_probs=26.2

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||.|+.||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=2.9e-08  Score=46.35  Aligned_cols=29  Identities=31%  Similarity=0.607  Sum_probs=26.4

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||+|++|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.61  E-value=1.4e-09  Score=61.27  Aligned_cols=37  Identities=24%  Similarity=0.393  Sum_probs=32.0

Q ss_pred             HHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        115 RNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       115 ~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      ..|+++|++++||.|++||+.|.+.+.|.   + .|++++|
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-~H~~~k~   39 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---L-FDPMTGT   39 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---H-EETTTTE
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---h-hcCCCCC
Confidence            45778899999999999999999998886   5 7888875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=2.4e-09  Score=64.69  Aligned_cols=37  Identities=16%  Similarity=0.313  Sum_probs=32.6

Q ss_pred             HHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        118 YRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       118 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .++|++++||.|++|++.|.+.+.|..|++ .|++++|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp   53 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQ   53 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHH
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCC
Confidence            356889999999999999999999999999 7877654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.59  E-value=2.3e-08  Score=46.01  Aligned_cols=27  Identities=30%  Similarity=0.642  Sum_probs=23.5

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ||.|++|++.|.+.+.|.+|++ .|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~-~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQR-VHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGG-GTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHH-HcCCC
Confidence            6899999999999999999999 77764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.59  E-value=3.5e-08  Score=46.38  Aligned_cols=30  Identities=20%  Similarity=0.575  Sum_probs=26.9

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      ++|+|++||+.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            478999999999999999999999987653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=6.7e-09  Score=54.96  Aligned_cols=35  Identities=26%  Similarity=0.375  Sum_probs=31.8

Q ss_pred             ccCCCCCccccc--ccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ..|.+++||+|+  .||+.|...+.|..|+++|++++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            678899999996  79999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.56  E-value=3.7e-08  Score=45.92  Aligned_cols=29  Identities=21%  Similarity=0.550  Sum_probs=26.3

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||.|+.||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=3.9e-08  Score=45.32  Aligned_cols=27  Identities=33%  Similarity=0.621  Sum_probs=24.6

Q ss_pred             CCcccccccccccccHHHHHHHHhHhc
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ++||+|+.||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999998874

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=6.3e-08  Score=55.11  Aligned_cols=35  Identities=14%  Similarity=0.086  Sum_probs=31.3

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ..+..++||+|.+|++.|.....|..|+++|+++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            45678899999999999999999999999998754

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=3.5e-08  Score=45.83  Aligned_cols=28  Identities=29%  Similarity=0.431  Sum_probs=25.2

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      ++||+|++||+.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3689999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.55  E-value=5.5e-08  Score=46.67  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=26.9

Q ss_pred             CCccccc--ccccccccHHHHHHHHhHhcCCC
Q psy13210         79 RHKFVCY--ACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        79 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ++||+|+  .||+.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.55  E-value=5.3e-08  Score=46.41  Aligned_cols=29  Identities=38%  Similarity=0.579  Sum_probs=26.1

Q ss_pred             Cccccc--ccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCY--ACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||+|+  .||+.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            479998  89999999999999999998764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=3e-08  Score=45.84  Aligned_cols=27  Identities=22%  Similarity=0.493  Sum_probs=24.2

Q ss_pred             CCcccccccccccccHHHHHHHHhHhc
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ++||+|+.||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.52  E-value=6.4e-08  Score=44.43  Aligned_cols=27  Identities=19%  Similarity=0.404  Sum_probs=23.4

Q ss_pred             cccccccccccccHHHHHHHHhHhcCC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      ||+|++||+.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999998763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=1.2e-08  Score=47.97  Aligned_cols=29  Identities=31%  Similarity=0.547  Sum_probs=25.4

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||+|++||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47899999999999999999999988653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.89  E-value=1.5e-08  Score=47.87  Aligned_cols=28  Identities=36%  Similarity=0.764  Sum_probs=25.4

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +||+|+.||+.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            6899999999999999999999998865

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.7e-08  Score=46.14  Aligned_cols=25  Identities=36%  Similarity=0.712  Sum_probs=23.2

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhh
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      +||.|++||+.|.+.+.|..|++ .|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~-~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIR-HH   25 (26)
Confidence            58999999999999999999999 55

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=8.8e-08  Score=45.07  Aligned_cols=29  Identities=17%  Similarity=0.374  Sum_probs=25.3

Q ss_pred             CcccccccccccccHHHHHHH-HhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSH-IRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  108 (155)
                      +||.|+.||+.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478999999999999999999 78888753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.42  E-value=2.1e-07  Score=46.41  Aligned_cols=26  Identities=15%  Similarity=0.287  Sum_probs=23.9

Q ss_pred             CCCCCcccccccccccccHHHHHHHH
Q psy13210         76 DPFRHKFVCYACDYFSYNIGCMRSHI  101 (155)
Q Consensus        76 ~~~~~~~~C~~C~~~f~~~~~l~~H~  101 (155)
                      ..+++||+|++||+.|...++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45789999999999999999999998

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.9e-08  Score=44.89  Aligned_cols=26  Identities=27%  Similarity=0.507  Sum_probs=22.9

Q ss_pred             CcccccccccccccHHHHHHHHhHhc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      +||+|++||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47899999999999999999988874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.35  E-value=2.8e-07  Score=42.82  Aligned_cols=27  Identities=19%  Similarity=0.359  Sum_probs=24.4

Q ss_pred             CCeecC--cCcccccCchHHHHHHhhhhCC
Q psy13210        125 KPFKCV--VCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       125 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      +||.|+  .|++.|.+.+.|..|++ .|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~-~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKK-IHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHG-GGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHH-HhCC
Confidence            479999  99999999999999999 6764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.24  E-value=6.2e-07  Score=41.56  Aligned_cols=27  Identities=26%  Similarity=0.461  Sum_probs=24.3

Q ss_pred             Cccccc--ccccccccHHHHHHHHhHhcC
Q psy13210         80 HKFVCY--ACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        80 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      ++|+|+  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.7e-07  Score=53.81  Aligned_cols=58  Identities=12%  Similarity=0.096  Sum_probs=47.6

Q ss_pred             ccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         40 MIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        40 ~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .....++.|..|+..|. ...|..|+         .+.+++|+.|+.|++.|. ...|..|+++|+++.
T Consensus        12 ~c~~r~~~C~~C~~~~~-~~~L~~H~---------~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           12 ECPLRLAVCQHCDLELS-ILKLKEHE---------DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCEECSSSCCEEC-HHHHHHHH---------HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             cCCCcccCCcccChHhh-HHHHHHHH---------hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            34557889999999995 78888885         356778999999999987 499999999988653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.71  E-value=8.4e-05  Score=41.70  Aligned_cols=57  Identities=16%  Similarity=0.290  Sum_probs=43.9

Q ss_pred             cccc--cccccccHHHHHHHHh-HhcCCCCcHHHHHHHHHhccCCCCeecC--cCcccccCchHHHHHHhhhh
Q psy13210         83 VCYA--CDYFSYNIGCMRSHIR-THTGEKPYAHIIRNHYRKHTGRKPFKCV--VCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus        83 ~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H  150 (155)
                      .|..  |++.|.+...|..|+. .|.+.++-           ....+|.|.  .|++.+.....|..|++..|
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~-----------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFK-----------HPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC-----------CSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccC-----------CCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            4544  9999999999999985 57754420           012379997  79999999999999999655

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.65  E-value=1e-05  Score=51.29  Aligned_cols=29  Identities=21%  Similarity=0.567  Sum_probs=26.8

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ..|+|++||.|..|++.|.+.+.|..|++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            34789999999999999999999999987

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.36  E-value=0.00039  Score=44.42  Aligned_cols=27  Identities=22%  Similarity=0.287  Sum_probs=23.6

Q ss_pred             ccCCCCeecCcCcccccCchHHHHHHh
Q psy13210        121 HTGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       121 h~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      +.+.+.|-|.+|++.|.+...|..|..
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            445677999999999999999999976

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.29  E-value=0.00029  Score=39.45  Aligned_cols=51  Identities=14%  Similarity=0.410  Sum_probs=41.5

Q ss_pred             hhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCC------ccccc--ccccccccHHHHHHHHhHh
Q psy13210         47 RLERLRTQCATSAELTQHEIRTIESMIRTDPFRH------KFVCY--ACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        47 ~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  104 (155)
                      ++..|++.|.+...|..|+-       +.|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         5 ~W~~C~~~f~~~~~l~~Hv~-------~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            5 KWKECPESASSLFDLQRHLL-------KDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCTTCCCCCSSHHHHHHHHH-------HHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eeCCCCCcCCCHHHHHHHHH-------hhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            35679999999999999972       3565443      79997  6999999999999998863

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.80  E-value=0.00029  Score=44.67  Aligned_cols=31  Identities=19%  Similarity=0.368  Sum_probs=27.2

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHh
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      ..++++++|.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            5667889999999999999999999998763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.63  E-value=0.0016  Score=33.65  Aligned_cols=23  Identities=17%  Similarity=0.257  Sum_probs=21.9

Q ss_pred             CCeecCcCcccccCchHHHHHHh
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      .+|.|+-|+..|.....|++|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57999999999999999999998

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.05  E-value=0.01  Score=37.79  Aligned_cols=60  Identities=12%  Similarity=0.043  Sum_probs=44.4

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHH--hhhhh---h--------------------hccCCCCCcccccccccccccHHHHH
Q psy13210         44 SADRLERLRTQCATSAELTQHEI--RTIES---M--------------------IRTDPFRHKFVCYACDYFSYNIGCMR   98 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~--~~~~~---~--------------------~~~~~~~~~~~C~~C~~~f~~~~~l~   98 (155)
                      .++.|..|+..|.+.+.+..|..  .+...   -                    ...+.....|-|.+|+..|.+...+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            55889999999999999999973  11111   0                    00123455688999999999999999


Q ss_pred             HHHhH
Q psy13210         99 SHIRT  103 (155)
Q Consensus        99 ~H~~~  103 (155)
                      .|...
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.74  E-value=0.016  Score=29.94  Aligned_cols=24  Identities=17%  Similarity=0.312  Sum_probs=15.6

Q ss_pred             CcccccccccccccHHHHHHHHhH
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      .++.|+-|+..|.....|..||.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            456666666666666666666654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.55  E-value=0.012  Score=28.34  Aligned_cols=28  Identities=18%  Similarity=0.454  Sum_probs=25.4

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      .|.|++|.+.|.+...|..|-...|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4999999999999999999998888764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.95  E-value=0.053  Score=26.07  Aligned_cols=25  Identities=20%  Similarity=0.320  Sum_probs=20.8

Q ss_pred             cccccccccccccHHHHHHHHhH-hc
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT-HT  105 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~-h~  105 (155)
                      .|.||+|-+.|.+...|..|... |.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999999999999999765 54

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.64  E-value=0.11  Score=34.31  Aligned_cols=54  Identities=19%  Similarity=0.172  Sum_probs=34.3

Q ss_pred             cccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +..|+.|+..+ ....|..|..                 ..=..++..|+.|+..+.. ..|..|+. .++|+.
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~-----------------~~C~~r~~~C~~C~~~~~~-~~l~~H~~-~~~~~~  163 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHIL-----------------KDCPRRQVSCDNCAASMAF-EDKEIHDQ-NCPLAL  163 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHH-----------------HTCTTCEEECTTTCCEEEG-GGHHHHHT-TCCC--
T ss_pred             eeECCCCChHH-HHHHHHHHhh-----------------hhCCCCCeECCCCCCccCH-HHHHhHHH-hCcChh
Confidence            44566666655 3444555544                 3336677899999998855 67789998 677654

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=92.59  E-value=0.029  Score=32.35  Aligned_cols=53  Identities=17%  Similarity=0.141  Sum_probs=29.0

Q ss_pred             ccccccccccccHHHHHHHHhHhcCCCCcH--HHHHHHHHhccCCCCeecCcCcccccC
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTHTGEKPYA--HIIRNHYRKHTGRKPFKCVVCKQFFAT  138 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~--~~l~~H~~~h~~~~~~~C~~C~k~f~~  138 (155)
                      -+||+||.......-..+-+..-..+..++  ..+..-    ..+--|+|+.||.-|--
T Consensus         9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~----~e~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A            9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQ----VEEFVFKCPVCGEEFYG   63 (95)
T ss_dssp             EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHH----HHHSEEECTTTCCEEET
T ss_pred             ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHH----HHHHhhcCCCccHHHhc
Confidence            479999998877665444333222221111  111111    12335999999988754

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.16  E-value=0.056  Score=35.81  Aligned_cols=58  Identities=10%  Similarity=-0.001  Sum_probs=41.3

Q ss_pred             cChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         43 ISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        43 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      .....|..|+..+ ....|..|.        ...-..++-.|+.|+..+. ...|..|..+++|+.++
T Consensus       108 ~~~v~C~~C~~~~-~r~~l~~H~--------~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          108 FALMDCPQCQRPF-QKFHINIHI--------LKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TSEEECTTTCCEE-EGGGHHHHH--------HHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             ceeeECCCCChHH-HHHHHHHHh--------hhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            3456688888876 456788887        6666677788999999874 46678999888877654

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.96  E-value=0.038  Score=31.80  Aligned_cols=27  Identities=19%  Similarity=0.476  Sum_probs=22.3

Q ss_pred             CeecCcCccccc-------CchHHHHHHhhhhCC
Q psy13210        126 PFKCVVCKQFFA-------TYSGAYQHLRRTHGQ  152 (155)
Q Consensus       126 ~~~C~~C~k~f~-------~~~~L~~H~~~~H~~  152 (155)
                      .=.|.+|++.+.       ..+.|.+|++..|..
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            457999999998       468999999977753

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.88  E-value=0.12  Score=24.16  Aligned_cols=27  Identities=22%  Similarity=0.554  Sum_probs=23.4

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      .--|.+|.+.++--.+|..|.+..|..
T Consensus         9 kqhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            346999999999999999999977754

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=90.10  E-value=0.15  Score=29.97  Aligned_cols=23  Identities=26%  Similarity=0.554  Sum_probs=19.1

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      ...|-+||+.|..   |.+|++.+|+
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hg   43 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHS   43 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTC
T ss_pred             ceEecccchhhHH---HHHHHHHccC
Confidence            4789999999995   8899995454

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.24  E-value=0.55  Score=22.64  Aligned_cols=24  Identities=17%  Similarity=0.198  Sum_probs=21.6

Q ss_pred             CCCeecCcCcccccCchHHHHHHh
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ...+.|..|+-+|.+-..+..|++
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            346899999999999999999987

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.87  E-value=0.87  Score=21.95  Aligned_cols=24  Identities=21%  Similarity=0.254  Sum_probs=16.1

Q ss_pred             CcccccccccccccHHHHHHHHhH
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      ..+.|..|+.+|.....+..|.+-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            345677777777777777776553

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.77  E-value=0.35  Score=22.05  Aligned_cols=22  Identities=23%  Similarity=0.686  Sum_probs=19.2

Q ss_pred             cccccccccccccHHHHHHHHh
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIR  102 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~  102 (155)
                      .|.|++|.....+...|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4789999999999999998854

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=87.13  E-value=0.31  Score=28.66  Aligned_cols=28  Identities=25%  Similarity=0.544  Sum_probs=20.5

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCCC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  109 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  109 (155)
                      +....|-+||+.|..   |.+|+..+.|-.|
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCCH
Confidence            344689999999984   7788888666544

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=86.51  E-value=0.53  Score=29.49  Aligned_cols=29  Identities=28%  Similarity=0.709  Sum_probs=25.8

Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .+.+..|-+|...|.+...+..|++..|.
T Consensus        12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           12 GRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            45679999999999999999999997775

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=85.80  E-value=0.25  Score=25.32  Aligned_cols=30  Identities=17%  Similarity=0.246  Sum_probs=18.5

Q ss_pred             hhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccc
Q psy13210         45 ADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYF   90 (155)
Q Consensus        45 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~   90 (155)
                      -|.|-.||+.|.....             ..-+   ..+|++||..
T Consensus         3 iY~C~rCg~~fs~~el-------------~~lP---~IrCpyCGyr   32 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQL-------------KVLP---GVRCPYCGYK   32 (48)
T ss_dssp             --CCCCTTTTCCCCCS-------------CCCS---SSCCTTTCCS
T ss_pred             EEEeeccCCCccHHHH-------------hhCC---CcccCccCcE
Confidence            4789999999876421             1111   2469999974

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=83.45  E-value=0.58  Score=32.11  Aligned_cols=24  Identities=25%  Similarity=0.623  Sum_probs=21.9

Q ss_pred             CCCeecCcCcccccC-chHHHHHHh
Q psy13210        124 RKPFKCVVCKQFFAT-YSGAYQHLR  147 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~-~~~L~~H~~  147 (155)
                      ..|..|..|+..|.+ ...|+.|+.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~  191 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQ  191 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHH
Confidence            558999999999987 999999988

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.24  E-value=0.45  Score=32.58  Aligned_cols=16  Identities=19%  Similarity=0.401  Sum_probs=12.1

Q ss_pred             CCCCcccccccccccc
Q psy13210         77 PFRHKFVCYACDYFSY   92 (155)
Q Consensus        77 ~~~~~~~C~~C~~~f~   92 (155)
                      .....|.|+.||..+.
T Consensus       167 ~~~~~~~C~~CG~i~~  182 (202)
T 1yuz_A          167 DDDKFHLCPICGYIHK  182 (202)
T ss_dssp             CSCCEEECSSSCCEEE
T ss_pred             CCCcEEEECCCCCEEc
Confidence            3445799999999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	155
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 3e-06
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
           R H+G KP++C +C   F        H+ + H + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.002
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
              +   R+ +KC  C + F+  S   +H RRTH  E
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGE 38

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHG 151
           R HTG KP+ C  C + F        H +R H 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (74), Expect = 0.002
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH 150
             R  TG KPF+C  C + F+       H R+ H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALH-RKRH 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 121 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE 153
           H+G KP+ CV C + F+  S   QH +R H  E
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQH-QRVHTGE 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	155
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.75
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.58
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.56
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.55
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.5
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.48
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.45
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.43
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.41
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.38
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.38
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.35
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.31
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.28
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.27
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.26
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.24
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.23
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.1
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.08
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.05
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.02
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.01
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.0
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.95
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.82
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.78
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.62
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.58
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.55
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.49
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.46
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.45
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.39
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.33
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.23
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.15
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.13
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.13
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.06
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.02
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.02
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.0
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.96
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.96
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.9
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.88
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.84
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.79
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.77
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.69
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.67
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.64
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.62
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.6
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.52
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.49
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.41
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.29
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.29
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.04
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.02
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.93
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.82
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.78
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.75
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.72
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.71
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.65
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.6
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.46
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.44
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.94
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.92
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.8
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.5
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.4
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.21
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.2
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.18
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.78
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.73
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.56
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.25
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.14
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.79
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.76
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	93.7
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	93.62
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.6
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.52
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.44
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.19
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.11
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.84
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.25
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	89.98
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.4
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.37
d1fu9a_	36	U-shaped transcription factor, different fingers {	86.59
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	85.99
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	84.93
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.75
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	83.35
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.94
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	80.38
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	80.24

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.6e-19  Score=96.14  Aligned_cols=53  Identities=23%  Similarity=0.475  Sum_probs=48.5

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCCCcHHHHHHHHHhccCCCCeecCcCcccccCchHHHHHHhhhh
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAHIIRNHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      ++||+|+ ||+.|....+|..|+++|+                 |++||.|++||++|.+.+.|.+|++ .|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-----------------~ekpy~C~~C~k~F~~~~~L~~H~r-~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-----------------GLRPYGCGVCGKKFKMKHHLVGHMK-IH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-----------------CCCSEECTTTSCEESSSHHHHHHHT-TT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-----------------cccCCcCCCcCCEecCHHHHHHHHh-cC
Confidence            5899995 9999999999998888777                 8888999999999999999999998 55

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.9e-16  Score=85.85  Aligned_cols=52  Identities=10%  Similarity=0.068  Sum_probs=49.7

Q ss_pred             ChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccccccHHHHHHHHhHh
Q psy13210         44 SADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH  104 (155)
Q Consensus        44 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  104 (155)
                      .+|+|+ ||+.|.....|..|+        ++|++++||+|++||+.|...+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~--------~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHM--------SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHH--------HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHh--------hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            578995 999999999999999        9999999999999999999999999999887

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.6e-16  Score=79.74  Aligned_cols=37  Identities=30%  Similarity=0.480  Sum_probs=34.8

Q ss_pred             HHHHhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        116 NHYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       116 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +|+++|++++||.|++|||+|.+.++|.+|++ .|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r-~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCc-cCCCC
Confidence            47788999999999999999999999999999 89986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.4e-15  Score=73.37  Aligned_cols=33  Identities=42%  Similarity=0.712  Sum_probs=31.5

Q ss_pred             hccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        120 KHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       120 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +|+|++||.|.+||++|.+.++|.+|++ .|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r-~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcc-ccCCC
Confidence            6899999999999999999999999999 89886

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.6e-15  Score=73.57  Aligned_cols=35  Identities=29%  Similarity=0.719  Sum_probs=32.2

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ++|+||+||.|++|+++|.++++|.+|++.+|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            47999999999999999999999999988788765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=9.1e-15  Score=72.19  Aligned_cols=34  Identities=29%  Similarity=0.569  Sum_probs=31.0

Q ss_pred             HhccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        119 RKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       119 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ++|+||+||.|.+||++|.+.+.|.+|++ .|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r-~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHH-HTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCc-ccCCC
Confidence            57999999999999999999999999999 66654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=7.9e-15  Score=72.91  Aligned_cols=35  Identities=31%  Similarity=0.497  Sum_probs=32.0

Q ss_pred             HHHhccCCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        117 HYRKHTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       117 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |.++|+||+||.|++|+++|.++++|.+|++ .|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r-~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHh-cCcC
Confidence            5678999999999999999999999999999 7753

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=4.3e-14  Score=68.89  Aligned_cols=32  Identities=31%  Similarity=0.769  Sum_probs=30.3

Q ss_pred             ccCCCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        121 HTGRKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       121 h~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      |+||+||.|++|+|.|.+.+.|.+|++ .|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCCc
Confidence            789999999999999999999999999 88875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=4.3e-14  Score=70.64  Aligned_cols=35  Identities=29%  Similarity=0.408  Sum_probs=33.4

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +++|++++||+|++||++|...++|..|+++|+||
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            39999999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.3e-13  Score=68.85  Aligned_cols=33  Identities=24%  Similarity=0.449  Sum_probs=31.1

Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .++||.|++||++|.+.++|.+|++.+|+++||
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp   34 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP   34 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcC
Confidence            579999999999999999999998768999998

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-13  Score=65.89  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=31.3

Q ss_pred             cCCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         75 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        75 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +|++++||+|.+||++|...++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588999999999999999999999999999985

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.36  E-value=1.7e-13  Score=64.06  Aligned_cols=29  Identities=34%  Similarity=0.669  Sum_probs=27.8

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++||++|.+.+.|.+|++ .|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccC-cccCCC
Confidence            69999999999999999999999 999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.9e-13  Score=67.57  Aligned_cols=28  Identities=21%  Similarity=0.465  Sum_probs=24.3

Q ss_pred             CCCcccccccccccccHHHHHHHHh-Hhc
Q psy13210         78 FRHKFVCYACDYFSYNIGCMRSHIR-THT  105 (155)
Q Consensus        78 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~  105 (155)
                      .++||+|.+||+.|...++|.+|++ +|+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC
Confidence            4689999999999999999998865 577

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.1e-13  Score=63.60  Aligned_cols=29  Identities=28%  Similarity=0.563  Sum_probs=27.7

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|++||++|.+++.|.+|++ .|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r-~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIK-THQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHH-GGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcC-ccCCcC
Confidence            68999999999999999999999 899986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=6.1e-13  Score=65.47  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=32.5

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      ++|++++||+|.+||++|...++|..|+++|.+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999998653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=4e-13  Score=62.04  Aligned_cols=28  Identities=36%  Similarity=0.759  Sum_probs=26.4

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |+||.|++|+|+|.+++.|.+|++ .|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r-~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIR-THTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHC
T ss_pred             CcCccCCCCcCEecccccccccCC-CccC
Confidence            689999999999999999999999 7875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.28  E-value=1.3e-13  Score=71.85  Aligned_cols=38  Identities=24%  Similarity=0.469  Sum_probs=33.8

Q ss_pred             HHHHHhccCCCCeecCc--CcccccCchHHHHHHhhhhCCCC
Q psy13210        115 RNHYRKHTGRKPFKCVV--CKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       115 ~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      ..|+ .|+|++||.|++  |++.|...++|.+|++ .|+|||
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTTC
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcc-cccCCC
Confidence            3445 488999999988  9999999999999999 999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.27  E-value=1.2e-12  Score=61.02  Aligned_cols=29  Identities=34%  Similarity=0.589  Sum_probs=27.4

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||+|++||+.|...++|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=1.4e-12  Score=64.60  Aligned_cols=34  Identities=21%  Similarity=0.208  Sum_probs=32.1

Q ss_pred             hccCCCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         73 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        73 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      .++|++++||+|++||+.|..+++|..|+++|.+
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            4999999999999999999999999999999974

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1.5e-12  Score=60.07  Aligned_cols=28  Identities=36%  Similarity=0.578  Sum_probs=26.7

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      ++||+|++||+.|...++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5899999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=2.6e-12  Score=62.42  Aligned_cols=32  Identities=22%  Similarity=0.331  Sum_probs=30.0

Q ss_pred             CCCCCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         76 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        76 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      |++++||+|++|++.|..+++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67899999999999999999999999999865

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.8e-12  Score=59.71  Aligned_cols=29  Identities=31%  Similarity=0.550  Sum_probs=27.3

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |||.|++||+.|...++|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2e-12  Score=58.23  Aligned_cols=26  Identities=42%  Similarity=0.869  Sum_probs=24.3

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +||.|.+|||+|.+.+.|.+|+| .|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqr-iHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQR-IHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHH-HHH
T ss_pred             CCccCCCCcCeeccCcccccCcc-CCC
Confidence            69999999999999999999999 664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=6.1e-12  Score=61.71  Aligned_cols=33  Identities=27%  Similarity=0.448  Sum_probs=29.7

Q ss_pred             ccCCCCCcccccccccccccHHHHHHHHhHhcC
Q psy13210         74 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        74 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      ++|++++||+|++|++.|...++|..|++.+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            579999999999999999999999999876443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.6e-11  Score=55.16  Aligned_cols=26  Identities=23%  Similarity=0.407  Sum_probs=24.7

Q ss_pred             CcccccccccccccHHHHHHHHhHhc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      |||+|.+||+.|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2e-11  Score=57.09  Aligned_cols=28  Identities=36%  Similarity=0.778  Sum_probs=26.5

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      |||.|++  |+|+|.+.+.|.+|++ .|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH-HTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC-cCcCC
Confidence            6899999  9999999999999999 89986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.4e-11  Score=57.35  Aligned_cols=29  Identities=34%  Similarity=0.661  Sum_probs=26.8

Q ss_pred             CCeecC--cCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCV--VCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|+  .|||+|.+.++|.+|++ .|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r-~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC-cccccC
Confidence            689996  49999999999999999 899986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.3e-11  Score=56.98  Aligned_cols=28  Identities=32%  Similarity=0.675  Sum_probs=26.3

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      |||.|++  |||+|.+.+.|.+|+| .|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR-IHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH-HHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCcccc-ccCCC
Confidence            6999988  9999999999999999 89886

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=1.1e-11  Score=64.45  Aligned_cols=34  Identities=26%  Similarity=0.378  Sum_probs=31.7

Q ss_pred             cCCCCCcccccc--cccccccHHHHHHHHhHhcCCC
Q psy13210         75 TDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        75 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .|.+++||+|++  |++.|...++|..|+++|+|++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            489999999987  9999999999999999999875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1e-10  Score=54.64  Aligned_cols=28  Identities=29%  Similarity=0.586  Sum_probs=26.4

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcCC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +||+|++  ||+.|...++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1e-10  Score=57.12  Aligned_cols=27  Identities=19%  Similarity=0.434  Sum_probs=22.9

Q ss_pred             ccccc--cccccccHHHHHHHHhHhcCCC
Q psy13210         82 FVCYA--CDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        82 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |.|+.  ||+.|...+.|.+|+++|+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgek   30 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTR   30 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCC
Confidence            77887  9999999999999988888333

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.1e-10  Score=54.55  Aligned_cols=28  Identities=32%  Similarity=0.484  Sum_probs=26.3

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcCC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +||+|++  ||++|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=2.7e-10  Score=53.91  Aligned_cols=29  Identities=21%  Similarity=0.621  Sum_probs=26.7

Q ss_pred             CCCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        124 RKPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       124 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      |+||.|++  |+|+|...++|.+|++ .|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r-~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh-hccCC
Confidence            68999998  9999999999999999 78764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.5e-10  Score=53.80  Aligned_cols=29  Identities=38%  Similarity=0.563  Sum_probs=26.4

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcCCC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +||+|++  ||+.|...++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5899964  9999999999999999999875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=3e-10  Score=52.53  Aligned_cols=27  Identities=30%  Similarity=0.751  Sum_probs=25.1

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhCC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      +||.|++  |+|+|...+.|.+|++ .|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r-~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR-IHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH-HHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC-ccCC
Confidence            6999988  9999999999999999 7875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=8.5e-10  Score=53.73  Aligned_cols=28  Identities=21%  Similarity=0.440  Sum_probs=26.5

Q ss_pred             eecCc--CcccccCchHHHHHHhhhhCCCCC
Q psy13210        127 FKCVV--CKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       127 ~~C~~--C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      |.|++  ||+.|.+.+.|.+|++ .|+|+||
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekp   31 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRD   31 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCC
Confidence            78987  9999999999999999 8999998

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=5.9e-10  Score=50.96  Aligned_cols=26  Identities=31%  Similarity=0.717  Sum_probs=24.2

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +||.|++  |||+|...++|.+|++ .|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r-~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL-THA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH-HHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh-hcc
Confidence            6999998  9999999999999999 775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=1.1e-09  Score=50.49  Aligned_cols=27  Identities=33%  Similarity=0.588  Sum_probs=25.4

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  106 (155)
                      +||+|++  ||+.|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.8e-09  Score=46.14  Aligned_cols=26  Identities=27%  Similarity=0.524  Sum_probs=24.2

Q ss_pred             cccccccccccccHHHHHHHHhHhcC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      |++|+.|++.|+.+..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=2.8e-09  Score=50.35  Aligned_cols=29  Identities=17%  Similarity=0.314  Sum_probs=26.6

Q ss_pred             CCcccccc--cccccccHHHHHHHHhHhcCC
Q psy13210         79 RHKFVCYA--CDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        79 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      ++||.|++  ||+.|...++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999998  999999999999999999853

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1e-08  Score=46.97  Aligned_cols=31  Identities=29%  Similarity=0.630  Sum_probs=28.3

Q ss_pred             CcccccccccccccHHHHHHHHhHhcCCCCc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  110 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  110 (155)
                      +...|.+||+.|.+...|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4567999999999999999999999999887

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=4.8e-09  Score=47.85  Aligned_cols=26  Identities=31%  Similarity=0.494  Sum_probs=24.3

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhc
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  105 (155)
                      +||+|++  ||+.|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=1.4e-08  Score=44.81  Aligned_cols=27  Identities=33%  Similarity=0.646  Sum_probs=24.9

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      |+||.|++||+.|..+....+|.+ .|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k-iH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK-IHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG-GGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhh-hcc
Confidence            689999999999999999999999 663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.3e-08  Score=43.40  Aligned_cols=26  Identities=35%  Similarity=0.687  Sum_probs=24.0

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |++|++|+|.|+.+..|..|+| .|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr-~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMR-CHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGG-GCCC
T ss_pred             CCccchhhhHhcchhHHHHHhh-ccCC
Confidence            6789999999999999999999 7875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=2.7e-08  Score=43.52  Aligned_cols=29  Identities=34%  Similarity=0.638  Sum_probs=27.1

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      |+||+|..|.+.-..++.|..|+| .|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr-~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLR-SHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHT-TCCSC
T ss_pred             CCcceeeecccccCCchheEEeee-cccCc
Confidence            689999999999999999999999 88875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4.6e-08  Score=44.72  Aligned_cols=31  Identities=26%  Similarity=0.470  Sum_probs=28.7

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCCCCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQESI  155 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~p  155 (155)
                      .+...|+.|||.|.-.-.|.+|.. .|++|||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhkl-shs~ekp   33 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKL-SHSGEKP   33 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGG-GSCSCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhc-ccCCCCC
Confidence            356889999999999999999999 9999998

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=6e-08  Score=43.33  Aligned_cols=29  Identities=24%  Similarity=0.494  Sum_probs=26.8

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      ++||.|++|+..|+.+..|.-|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.3e-08  Score=42.55  Aligned_cols=29  Identities=38%  Similarity=0.756  Sum_probs=26.7

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      ++||+|..|.+...+.+.|..|+++|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47999999999999999999999999873

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.45  E-value=6.7e-08  Score=42.53  Aligned_cols=27  Identities=19%  Similarity=0.316  Sum_probs=25.2

Q ss_pred             CCcccccccccccccHHHHHHHHhHhc
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ++||.|.+||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=9.5e-08  Score=42.67  Aligned_cols=28  Identities=32%  Similarity=0.640  Sum_probs=25.7

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |+||.|++|+..|..+..+..|.| .|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvr-shdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVR-SHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHH-HHSC
T ss_pred             CCCcccchHHHHhhccccceEeee-cccC
Confidence            689999999999999999999999 6655

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2.1e-07  Score=40.38  Aligned_cols=27  Identities=26%  Similarity=0.369  Sum_probs=24.7

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      -+.|.+|||.|.-++.|++|+. .|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~l-vhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQL-VHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGG-GTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhh-cccCC
Confidence            4689999999999999999999 88875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.9e-07  Score=39.55  Aligned_cols=27  Identities=30%  Similarity=0.455  Sum_probs=24.3

Q ss_pred             cccccccccccccHHHHHHHHhHhcCC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      .+.|.+||+.|...+.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            367999999999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=5.5e-07  Score=39.68  Aligned_cols=30  Identities=27%  Similarity=0.509  Sum_probs=28.2

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +||.|.+|......+++|.-|+++.|+.||
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            589999999999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.1e-06  Score=38.53  Aligned_cols=27  Identities=30%  Similarity=0.662  Sum_probs=25.1

Q ss_pred             ccccccccccccHHHHHHHHhHhcCCC
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      |.|++||.....++-|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=7.6e-07  Score=39.64  Aligned_cols=27  Identities=30%  Similarity=0.769  Sum_probs=24.3

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +||.|.+  |+|++.-.++|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999996664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=5.4e-07  Score=40.50  Aligned_cols=29  Identities=38%  Similarity=0.723  Sum_probs=25.8

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +||.|.+  |.|.|++.|...+|+.+.|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899988  9999999999999985588865

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.5e-06  Score=37.14  Aligned_cols=26  Identities=27%  Similarity=0.400  Sum_probs=24.4

Q ss_pred             ecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        128 KCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       128 ~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|+.|.|+|.++--|..|-| .|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr-~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR-KHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH-HHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccc-cccCCC
Confidence            69999999999999999999 899886

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.02  E-value=2.7e-06  Score=36.32  Aligned_cols=26  Identities=35%  Similarity=0.507  Sum_probs=24.0

Q ss_pred             cccccccccccHHHHHHHHhHhcCCC
Q psy13210         83 VCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        83 ~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      +|+.|.++|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.3e-06  Score=37.45  Aligned_cols=28  Identities=25%  Similarity=0.314  Sum_probs=25.9

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      .|.|++||......|-|..|.| .|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIR-sHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIR-THTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHH-HhcCCC
Confidence            3899999999999999999999 899875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=2.1e-06  Score=37.06  Aligned_cols=26  Identities=27%  Similarity=0.750  Sum_probs=24.7

Q ss_pred             CcccccccccccccHHHHHHHHhHhc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      +||+|..|++.-.+.++|+.|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999986

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2e-06  Score=41.38  Aligned_cols=26  Identities=31%  Similarity=0.668  Sum_probs=23.8

Q ss_pred             cCCCCeecCcCcccccCchHHHHHHh
Q psy13210        122 TGRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       122 ~~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      +|-+||.|..|+|.|.|..++-+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999964

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.96  E-value=2.4e-06  Score=38.35  Aligned_cols=28  Identities=21%  Similarity=0.591  Sum_probs=26.0

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      ||.|.+|++.|....-|.+|....|+|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7999999999999999999999888863

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.4e-06  Score=36.38  Aligned_cols=26  Identities=42%  Similarity=0.732  Sum_probs=24.4

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +||+|..|++.-.-.++|..|+| .|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~r-ihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLR-IHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH-HSC
T ss_pred             CCcccccccchhcchhhHhhhhh-ccc
Confidence            79999999999999999999999 775

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.90  E-value=3.8e-06  Score=35.26  Aligned_cols=24  Identities=33%  Similarity=0.690  Sum_probs=22.1

Q ss_pred             eecCcCcccccCchHHHHHHhhhhC
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      |+|..|.++|.-++.|.+|+| .|.
T Consensus         1 ykcglcersfveksalsrhqr-vhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR-VHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG-GTC
T ss_pred             CcccchHHHHHHHHHHHHHHH-hhc
Confidence            789999999999999999999 664

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.88  E-value=4.6e-06  Score=39.80  Aligned_cols=30  Identities=13%  Similarity=0.387  Sum_probs=25.7

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCCC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGEK  108 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  108 (155)
                      .+.|+|.+|++.|.+...|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999987544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=7.9e-06  Score=35.80  Aligned_cols=28  Identities=32%  Similarity=0.643  Sum_probs=25.8

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      +||+|.+|...-.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            6899999999999999999999988864

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.79  E-value=5.8e-06  Score=36.03  Aligned_cols=25  Identities=28%  Similarity=0.598  Sum_probs=22.4

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhh
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  150 (155)
                      .||.|+.  |+++|+..+.|++|.+ +|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhek-vh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEK-VH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHH-HH
T ss_pred             CCccCCccCccccccCHHHHhhhhh-cc
Confidence            4899975  9999999999999999 66

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.77  E-value=1e-05  Score=38.58  Aligned_cols=29  Identities=21%  Similarity=0.569  Sum_probs=25.7

Q ss_pred             CCeecCcCcccccCchHHHHHHhhhhCCCC
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLRRTHGQES  154 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  154 (155)
                      +.|.|.+|++.|.+...|-.|++ .|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~-~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMN-VHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHH-TTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHh-hhcchH
Confidence            56999999999999999999999 776554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.1e-05  Score=35.76  Aligned_cols=27  Identities=26%  Similarity=0.561  Sum_probs=23.5

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  106 (155)
                      +||.|.+  |++++.++++|.+|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899988  99999999999999987543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.8e-05  Score=34.71  Aligned_cols=27  Identities=26%  Similarity=0.687  Sum_probs=23.6

Q ss_pred             CcccccccccccccHHHHHHHHhH-hcC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT-HTG  106 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~  106 (155)
                      +||.|+.|.....+.++|..|+.+ |..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            589999999999999999999887 543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.67  E-value=1.6e-05  Score=34.81  Aligned_cols=28  Identities=36%  Similarity=0.616  Sum_probs=25.0

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +||+|.+  |.|.|.+--.|.+|.- .|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~-thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSL-THTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHH-HHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhc-cccCC
Confidence            5899976  9999999999999999 78775

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.5e-05  Score=34.83  Aligned_cols=28  Identities=32%  Similarity=0.517  Sum_probs=25.1

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcCC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +||+|.+  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5889977  999999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.5e-05  Score=34.84  Aligned_cols=23  Identities=17%  Similarity=0.574  Sum_probs=21.5

Q ss_pred             cccccccccccccHHHHHHHHhH
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      ||.|..|...|..+.+|..||.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.60  E-value=2.9e-05  Score=32.51  Aligned_cols=24  Identities=21%  Similarity=0.451  Sum_probs=19.8

Q ss_pred             ccccccccccccHHHHHHHHhHhc
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888888774

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=4.1e-05  Score=33.27  Aligned_cols=26  Identities=19%  Similarity=0.322  Sum_probs=23.0

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhc
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  105 (155)
                      .||+|+.  |++.|..++.|++|..+|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899987  9999999999999998873

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=6.4e-05  Score=32.71  Aligned_cols=29  Identities=31%  Similarity=0.495  Sum_probs=25.4

Q ss_pred             CCcccccccccccccHHHHHHHHhHhcCC
Q psy13210         79 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        79 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      ++.|.|..|..+|+..-.|..||-+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999999874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=4.9e-05  Score=33.11  Aligned_cols=22  Identities=27%  Similarity=0.732  Sum_probs=21.3

Q ss_pred             CeecCcCcccccCchHHHHHHh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ||.|..|..+|..+.+|..|++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            7999999999999999999998

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00011  Score=35.11  Aligned_cols=26  Identities=12%  Similarity=0.186  Sum_probs=23.1

Q ss_pred             CCCcccccccccccccHHHHHHHHhH
Q psy13210         78 FRHKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        78 ~~~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      +-+||.|.+|++.|....++.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            45899999999999999999999764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.29  E-value=7.3e-05  Score=33.38  Aligned_cols=26  Identities=19%  Similarity=0.405  Sum_probs=22.0

Q ss_pred             cccccccccccccHHHHHHHHhH-hcC
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT-HTG  106 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~-h~~  106 (155)
                      ||.|.+|++.|....-|.+|... |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            68999999999999999999764 654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00018  Score=30.94  Aligned_cols=26  Identities=27%  Similarity=0.390  Sum_probs=23.4

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |-+|++|.++.++++.|+.|.| .|-.
T Consensus         2 pekc~ecsyscsskaalrvh~r-ihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHER-IHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHG-GGCC
T ss_pred             CccCcccccccCcHHHHHHhhc-cccC
Confidence            5789999999999999999999 7754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00016  Score=30.17  Aligned_cols=22  Identities=18%  Similarity=0.381  Sum_probs=20.2

Q ss_pred             cccccccccccccHHHHHHHHh
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIR  102 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~  102 (155)
                      ||+|..|...|..+.+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999975

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=8e-05  Score=33.26  Aligned_cols=27  Identities=26%  Similarity=0.431  Sum_probs=23.0

Q ss_pred             Ccccccc--cccccccHHHHHHHH-hHhcC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHI-RTHTG  106 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  106 (155)
                      +||.|+.  |.+.|+..++-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899988  999999999999997 66764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00033  Score=33.00  Aligned_cols=28  Identities=25%  Similarity=0.354  Sum_probs=24.9

Q ss_pred             CCCcccccc--cccccccHHHHHHHHhHhc
Q psy13210         78 FRHKFVCYA--CDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        78 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  105 (155)
                      .++||.|..  |+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            479999955  9999999999999998885

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00034  Score=30.04  Aligned_cols=25  Identities=28%  Similarity=0.494  Sum_probs=22.6

Q ss_pred             cccccccccccccHHHHHHHHhHhc
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      |-+|+.|.++.+++..|..|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5589999999999999999999985

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00081  Score=29.09  Aligned_cols=29  Identities=28%  Similarity=0.541  Sum_probs=26.2

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +.-|.|..|...|...-.|+.|+- .|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmv-shtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMV-SHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHH-HHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeee-cccCC
Confidence            456999999999999999999999 88875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00065  Score=29.54  Aligned_cols=24  Identities=17%  Similarity=0.499  Sum_probs=21.2

Q ss_pred             CcccccccccccccHHHHHHHHhH
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      +||+|..|..--...++|..|+..
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999999999999999875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.75  E-value=0.00047  Score=29.39  Aligned_cols=22  Identities=23%  Similarity=0.593  Sum_probs=20.6

Q ss_pred             CeecCcCcccccCchHHHHHHh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      ||.|..|||.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999976

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.72  E-value=0.0006  Score=28.45  Aligned_cols=24  Identities=21%  Similarity=0.515  Sum_probs=22.4

Q ss_pred             eecCcCcccccCchHHHHHHhhhh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      |+|++|=+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            899999999999999999998766

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00072  Score=31.79  Aligned_cols=27  Identities=33%  Similarity=0.519  Sum_probs=23.9

Q ss_pred             CCCCeec--CcCcccccCchHHHHHHhhhh
Q psy13210        123 GRKPFKC--VVCKQFFATYSGAYQHLRRTH  150 (155)
Q Consensus       123 ~~~~~~C--~~C~k~f~~~~~L~~H~~~~H  150 (155)
                      .++||.|  +=|+.+|.+...|..|.. .|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~-KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKH-KH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHH-HH
T ss_pred             CCCceecCCCCccccccchHHHHHhhh-hh
Confidence            5899999  559999999999999988 55

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.65  E-value=0.00092  Score=28.45  Aligned_cols=23  Identities=17%  Similarity=0.339  Sum_probs=20.0

Q ss_pred             cccccccccccccHHHHHHHHhH
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      ||+|..||+.+-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999988654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.00087  Score=27.84  Aligned_cols=24  Identities=29%  Similarity=0.647  Sum_probs=21.7

Q ss_pred             CeecCcCcccccCchHHHHHHhhh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRT  149 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~  149 (155)
                      ||.|..|...|.++..|..|+-..
T Consensus         2 pykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhc
Confidence            899999999999999999998643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0012  Score=28.14  Aligned_cols=26  Identities=35%  Similarity=0.607  Sum_probs=23.3

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .|.|+.|+-....++.|..|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            48999999999999999999996664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.44  E-value=0.0011  Score=27.60  Aligned_cols=22  Identities=18%  Similarity=0.283  Sum_probs=20.0

Q ss_pred             ccccccccccccHHHHHHHHhH
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      |+|+.|-+.|..+.++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.002  Score=31.82  Aligned_cols=25  Identities=28%  Similarity=0.547  Sum_probs=22.7

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      -|+|-.|||.|.-...|+.|.. -|+
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEA-QHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEA-QHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHH-HHT
T ss_pred             eeeccccccccCCHHHHhHhHH-hcC
Confidence            4899999999999999999999 565

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0029  Score=31.23  Aligned_cols=26  Identities=19%  Similarity=0.294  Sum_probs=22.8

Q ss_pred             CcccccccccccccHHHHHHHHhHhc
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ..|.|-.||+.|.....|..|..-|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45889999999999999999988774

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.80  E-value=0.0022  Score=28.88  Aligned_cols=22  Identities=27%  Similarity=0.451  Sum_probs=20.4

Q ss_pred             CeecCcCcccccCchHHHHHHh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4899999999999999999975

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0066  Score=27.48  Aligned_cols=27  Identities=26%  Similarity=0.416  Sum_probs=22.2

Q ss_pred             CcccccccccccccHHHHHHHHhHhcC
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRTHTG  106 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  106 (155)
                      ..|.|..||++|.....+.+|-..-+|
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            468899999999999999988766544

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.40  E-value=0.0081  Score=26.35  Aligned_cols=28  Identities=25%  Similarity=0.555  Sum_probs=24.0

Q ss_pred             Ccccccc--cccccccHHHHHHHHhHhcCC
Q psy13210         80 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        80 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  107 (155)
                      +.|.|..  |+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577855  999999999999999999875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0075  Score=25.61  Aligned_cols=23  Identities=30%  Similarity=0.522  Sum_probs=20.4

Q ss_pred             cccccccccccccHHHHHHHHhH
Q psy13210         81 KFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        81 ~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      .|+|+.|+-....+++|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            47899999999999999999875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0054  Score=27.79  Aligned_cols=22  Identities=23%  Similarity=0.495  Sum_probs=20.3

Q ss_pred             CeecCcCcccccCchHHHHHHh
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      .|.|..|||.|.....+.+|-.
T Consensus         4 afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhh
Confidence            4899999999999999999976

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.18  E-value=0.013  Score=28.70  Aligned_cols=27  Identities=15%  Similarity=0.219  Sum_probs=23.8

Q ss_pred             CCCCcccccccccccccHHHHHHHHhH
Q psy13210         77 PFRHKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        77 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      .++.|-.|++|+.......+|.+|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            356788999999999999999999876

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.78  E-value=0.012  Score=24.79  Aligned_cols=24  Identities=25%  Similarity=0.443  Sum_probs=19.5

Q ss_pred             cccc--ccccccccHHHHHHHHhHhc
Q psy13210         82 FVCY--ACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        82 ~~C~--~C~~~f~~~~~l~~H~~~h~  105 (155)
                      |.|.  -|++.|+....|+.|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            3453  39999999999999998886

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.73  E-value=0.013  Score=26.20  Aligned_cols=24  Identities=17%  Similarity=0.422  Sum_probs=20.4

Q ss_pred             CcccccccccccccHHHHHHHHhH
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      ..|.|..||..|++.+.|..|+.-
T Consensus         7 arf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             cceeccccceeecChhHHHhhhhe
Confidence            458899999999999999988753

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.015  Score=26.52  Aligned_cols=19  Identities=32%  Similarity=0.245  Sum_probs=14.8

Q ss_pred             cccccHHHHHHHHhHhcCC
Q psy13210         89 YFSYNIGCMRSHIRTHTGE  107 (155)
Q Consensus        89 ~~f~~~~~l~~H~~~h~~~  107 (155)
                      +.|.....|..|+++|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4577888888888888875

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.25  E-value=0.026  Score=27.58  Aligned_cols=30  Identities=20%  Similarity=0.397  Sum_probs=26.3

Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      .+.|-.|++|+....++-+|++|+..-|-.
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            567899999999999999999999866654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.011  Score=26.98  Aligned_cols=21  Identities=24%  Similarity=0.156  Sum_probs=16.9

Q ss_pred             CcccccCchHHHHHHhhhhCCC
Q psy13210        132 CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       132 C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      =++.|.....|..|+| .|+||
T Consensus        13 ~~~pf~a~YkLv~H~R-~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMR-RHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTH-HHHCC
T ss_pred             CCCcchhHHHHHHHHh-hcCCC
Confidence            3567888999999999 78875

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.026  Score=24.01  Aligned_cols=22  Identities=32%  Similarity=0.609  Sum_probs=18.2

Q ss_pred             ccc--cccccccHHHHHHHHhHhc
Q psy13210         84 CYA--CDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        84 C~~--C~~~f~~~~~l~~H~~~h~  105 (155)
                      |+.  |++.|++.+.+..|+-+|-
T Consensus         4 CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             CCcccHHHHhhchHHHHHHhhccC
Confidence            544  9999999999999988773

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=0.0084  Score=32.27  Aligned_cols=25  Identities=24%  Similarity=0.687  Sum_probs=22.1

Q ss_pred             CCCCeecCcCcccccCchHHHHHHh
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      |...|-|..|+|.|.+...|..|++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCEEecccccCccCCHHHHHHHHc
Confidence            3456899999999999999999976

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.70  E-value=0.014  Score=27.28  Aligned_cols=13  Identities=31%  Similarity=0.557  Sum_probs=10.0

Q ss_pred             CCCCeecCcCccc
Q psy13210        123 GRKPFKCVVCKQF  135 (155)
Q Consensus       123 ~~~~~~C~~C~k~  135 (155)
                      |+.|-.|++|+..
T Consensus        17 g~~Pe~CPvCg~~   29 (36)
T d1yuza2          17 GEDFEKCPICFRP   29 (36)
T ss_dssp             SSCCSBCTTTCCB
T ss_pred             CCCCCcCCCCCCc
Confidence            5667889999864

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.62  E-value=0.013  Score=27.57  Aligned_cols=13  Identities=31%  Similarity=0.544  Sum_probs=10.2

Q ss_pred             CCCCeecCcCccc
Q psy13210        123 GRKPFKCVVCKQF  135 (155)
Q Consensus       123 ~~~~~~C~~C~k~  135 (155)
                      |+.|-.|++|+..
T Consensus        17 g~~P~~CPvCg~~   29 (37)
T d1nnqa2          17 DEAPEYCPVCGAP   29 (37)
T ss_dssp             SCCCSBCTTTCCB
T ss_pred             CCCCCcCCCCCCc
Confidence            5667899999864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.60  E-value=0.028  Score=24.59  Aligned_cols=28  Identities=25%  Similarity=0.444  Sum_probs=23.9

Q ss_pred             CCeecCc--CcccccCchHHHHHHhhhhCCC
Q psy13210        125 KPFKCVV--CKQFFATYSGAYQHLRRTHGQE  153 (155)
Q Consensus       125 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~  153 (155)
                      +.|.|.+  |+..|.....|..|+- .|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLc-kHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLS-KHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHH-HHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhh-hhcCC
Confidence            5688854  9999999999999999 78875

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.52  E-value=0.041  Score=23.60  Aligned_cols=26  Identities=31%  Similarity=0.566  Sum_probs=22.1

Q ss_pred             CeecC--cCcccccCchHHHHHHhhhhC
Q psy13210        126 PFKCV--VCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~--~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      .|.|+  -|+..|..++.+..|-.+.|.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            57885  499999999999999887775

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.031  Score=24.02  Aligned_cols=26  Identities=23%  Similarity=0.513  Sum_probs=22.3

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      -|.|..|||...+...++.|+--.|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            38899999999999999999874554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.071  Score=22.83  Aligned_cols=22  Identities=23%  Similarity=0.513  Sum_probs=18.1

Q ss_pred             ccccccccccccHHHHHHHHhH
Q psy13210         82 FVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        82 ~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      |.|..||+..++...++-|.-.
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            7788899888888888888654

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.11  E-value=0.054  Score=23.13  Aligned_cols=25  Identities=20%  Similarity=0.402  Sum_probs=19.8

Q ss_pred             ecCc--CcccccCchHHHHHHhhhhCC
Q psy13210        128 KCVV--CKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       128 ~C~~--C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      .|++  ||+.|++..-|.-|.+..|--
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyqh~h   28 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQHIH   28 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGGS
T ss_pred             CCCCCCchhhhccHHHHHhHHHHHHhh
Confidence            3544  999999999999998866643

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.84  E-value=0.04  Score=24.90  Aligned_cols=30  Identities=23%  Similarity=0.662  Sum_probs=25.5

Q ss_pred             CCCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        123 GRKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       123 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      |+.-|.|.+|.+.+...+++.+|--+.|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            455699999999999999999998766653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.03  Score=29.45  Aligned_cols=28  Identities=18%  Similarity=0.482  Sum_probs=24.2

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ..-|.|..|+-.|-+...|..|+. .|.+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~-~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLN-IHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHH-HHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHH-hccH
Confidence            345999999999999999999998 6653

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.98  E-value=0.068  Score=24.37  Aligned_cols=27  Identities=22%  Similarity=0.529  Sum_probs=23.5

Q ss_pred             CeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        126 PFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       126 ~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ...|-+|-++|.+.-++.+|+-..|..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheeccc
Confidence            357999999999999999999877764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.065  Score=28.64  Aligned_cols=24  Identities=21%  Similarity=0.515  Sum_probs=19.2

Q ss_pred             CcccccccccccccHHHHHHHHhH
Q psy13210         80 HKFVCYACDYFSYNIGCMRSHIRT  103 (155)
Q Consensus        80 ~~~~C~~C~~~f~~~~~l~~H~~~  103 (155)
                      ..|-|..|++.|.+...|..|.++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347788888888888888888764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.37  E-value=0.061  Score=28.27  Aligned_cols=40  Identities=15%  Similarity=0.225  Sum_probs=26.4

Q ss_pred             ccccChhhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCcccccccccc
Q psy13210         40 MIDISADRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYF   90 (155)
Q Consensus        40 ~~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~   90 (155)
                      ......|.|+.|++.|..   |..-+        ..-.....|.|..|+..
T Consensus         9 ~~~~~~y~Cp~C~~~ys~---Lda~~--------L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTD---LEANQ--------LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEH---HHHHH--------HEETTTTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcch---hhHHH--------hcCcCCCeEEecCCCCE
Confidence            344577889999988764   44433        33445567889888764

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.59  E-value=0.3  Score=22.15  Aligned_cols=21  Identities=19%  Similarity=0.289  Sum_probs=19.1

Q ss_pred             eecCcCcccccCchHHHHHHh
Q psy13210        127 FKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       127 ~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      --|..|+-+|.+-+.+..|..
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             hHHhhCCceehhHHHHHHHHH
Confidence            359999999999999999987

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.93  E-value=0.33  Score=28.92  Aligned_cols=28  Identities=25%  Similarity=0.656  Sum_probs=25.0

Q ss_pred             CCCeecCcCcccccCchHHHHHHhhhhC
Q psy13210        124 RKPFKCVVCKQFFATYSGAYQHLRRTHG  151 (155)
Q Consensus       124 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~  151 (155)
                      +.+-.|-+|++.|.+...+..|++..|.
T Consensus        13 ~~~~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          13 RQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             cccceecccCCccCCHHHHHHHHHHhhC
Confidence            4578999999999999999999997775

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.75  E-value=0.51  Score=24.54  Aligned_cols=28  Identities=21%  Similarity=0.413  Sum_probs=24.2

Q ss_pred             CCCcccccccccccccHHHHHHHHhHhc
Q psy13210         78 FRHKFVCYACDYFSYNIGCMRSHIRTHT  105 (155)
Q Consensus        78 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  105 (155)
                      ....|+|..|...|-....|..|+..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            4456999999999999999999998886

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.35  E-value=0.51  Score=21.16  Aligned_cols=23  Identities=22%  Similarity=0.563  Sum_probs=21.1

Q ss_pred             CCeecCcCcccccCchHHHHHHh
Q psy13210        125 KPFKCVVCKQFFATYSGAYQHLR  147 (155)
Q Consensus       125 ~~~~C~~C~k~f~~~~~L~~H~~  147 (155)
                      +-|.|++|-|-..+...|.+|+.
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHH
Confidence            45999999999999999999986

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=80.38  E-value=0.45  Score=29.96  Aligned_cols=39  Identities=26%  Similarity=0.556  Sum_probs=28.1

Q ss_pred             HHHHHHHHhcc-CCC------CeecCcCcccccCchHHHHHHhhhhCC
Q psy13210        112 HIIRNHYRKHT-GRK------PFKCVVCKQFFATYSGAYQHLRRTHGQ  152 (155)
Q Consensus       112 ~~l~~H~~~h~-~~~------~~~C~~C~k~f~~~~~L~~H~~~~H~~  152 (155)
                      ..|..|++..- ..+      -|+|..|||- .-..+|.+|++ .|+.
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgKY-vDie~~~~H~k-~HG~  170 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGKY-VDIENLEAHLR-EHGI  170 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCCE-EEGGGHHHHHH-TTTC
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCce-ecHHHHHHHHH-HcCc
Confidence            67888887642 222      3789999984 45678999999 7764

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=80.24  E-value=0.37  Score=22.32  Aligned_cols=32  Identities=3%  Similarity=-0.316  Sum_probs=21.8

Q ss_pred             hhhhhhhhhccCcHHHhhhHHhhhhhhhccCCCCCccccccccccccc
Q psy13210         46 DRLERLRTQCATSAELTQHEIRTIESMIRTDPFRHKFVCYACDYFSYN   93 (155)
Q Consensus        46 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~   93 (155)
                      +-|..||.+|..                ...+....-+|+.||..+..
T Consensus         3 ~vc~~cG~~Yh~----------------~~~pPk~~g~CD~cg~~L~q   34 (37)
T d2ak3a2           3 WIHPGSGRVYNI----------------EFNPPKTMGIDDLTGEPLVQ   34 (37)
T ss_dssp             EEETTTTEEEET----------------TTBCCSSTTBCTTTCCBCBC
T ss_pred             eeeCCcCChhhh----------------ccCCccccCCccCCCCcCEe
Confidence            347788887753                44455667789999976543