Psyllid ID: psy13233

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700----
MSKVKKGVAHCEDDIIEQTVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLEEEAPKDEEKKVEGDEEAKVEEAEDKEEKPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDNIKNELKKIELKLKKVIMRNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYSTNMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKESYKE
ccccccccccccccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHccccccccccccccEEEEEEcccccEEEEEEccccccHHHHHHcccccccccHHHHHHHHcccccccccccccccccccccccEEEEccEEEEEEccccccEEEEEEcccccEEEEcccccccccccEEEEEEcccccccccHHHHHHHHHHccccccccEEEEEEcEEcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHcccccccccccccccccEEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHcccccccEEEEEcccHHHHHccHHHHHHHHcccEEEEEccccHHHHHHcccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccHHHccccccccccccHHHHHHHHHHccccHHHHcHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccHHHHHHcccccccEEEEEEcccHHHHHcc
cccEEHccccccccccccccHHHcccccccccccHHHHHHHHHHHccccccHHHHHHHHcccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccEEEEEEccccEEEEEEccccccHHHHHHHccccccHHHHHHHHHHHccccccHcHHHHHHHHccHHHHHHHcEEEEEEEEEcccccEEEEEEccccEEEEEEccccccccEEEEEEEEccccHHHHcHHHHHHHHHHHcccccccEEEcEEEEEEEEccccHHHHHHHHHHccccccccccHHHHHHHHHccccccEEEEEEEcHHHHHccccEEccccHHccHHHHHHHHHHHccccHcccEEEEEEEEEEEEEEEEEEccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccHHHHHHHHHHHHccccccccccHHHHHHHcHHccccEEEEEcccHHHHHccHHHHHHHHcccEEEEEEccHHHHHHHHcHHccccEEEEEccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccEEcccHHHHHHHHHHHHccccccccccHHHHHHHcHHccccEEEEEcccHHHHHcc
mskvkkgvahcedDIIEQTVDvnigesregsrtdadapkvekeriqldglnpAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSltdasvldanpELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTtknnedsqyiwesdassfsivndprgdnlkrgTQISLELKEEASDFLEVNTLKDLIKKYSQFInfpiyiwssktiqvdepiedleeeapkdeekkvegdeeakveeaedkeekpktkkvdKTIWDWeqlndnkpiwtrkpadisdEEYNEFYKAMtkdrtdpltkihFVAEGEVTFKAVLfvpqtqpqdsfnrygttTDNIKNELKKIELKLKKVIMRNILLTIQINVFSFSmklgviedpaNRSRLAKLLMFqssssteptslSDYVkrmkpkqdhIYYIAgasrkevesspFVERLLRKGYEILYLVEAVdeytlsslpefegkkFQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQgivdsddlplnvsrETLQQHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYSTNmklgviedpaNRSRLAKLLMFqssssteptslSDYVkrmkpkqdhIYYIAGAsrkesyke
mskvkkgvahceddiieqtvdvnigesregsrtdadapkvekeriqldglnpaqLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLtdasvldaNPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTknnedsqyiwesdassfsivndprgdnLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLeeeapkdeekkvegdeeakveeaedkeekpktkkvdktiwdweqlndnkpiwtrkpadisDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFvpqtqpqdsfnrygtttdnikNELKKIELKLKKVIMRNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLmfqssssteptslsdyvKRMKPKQDHIYYiagasrkevesspfVERLLRKGYEILYLVEAVDEYTLSslpefegkkfQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHKLLKVIRKKLIRKALDmfkkldpetyKKFWAEYSTNMKLGVIEDPANRSRLAKLLMfqssssteptslsdyvkrmkpkqdhiyyiagasrkesyke
MSKVKKGVAHCEDDIIEQTVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIedleeeapkdeekkvegdeeakveeaedkeekpktkkvdktIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDniknelkkielklkkVIMRNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLMFQssssteptslsDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHkllkvirkklirkalDMFKKLDPETYKKFWAEYSTNMKLGVIEDPANRSRLAKLLMFQssssteptslsDYVKRMKPKQDHIYYIAGASRKESYKE
*************DIIE***********************************************YKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFL*******NIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDA**FSI*********************EASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQV*******************************************KTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDNIKNELKKIELKLKKVIMRNILLTIQINVFSFSMKLGVIEDPA*******L*************************DHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSI*****KMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYSTNMKLGVIED************************************HIYYIA**********
*******************************************************************EAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLS**********D**DMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTI******************************************KVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDNIKNELKKIELKLKKVIMRNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNI**********************YTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQG*****************************IRKALDMFKKLDPETYKKFWAEYSTNMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRK*****
*********HCEDDIIEQTVDVNIGE************KVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLE**********************************DKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDNIKNELKKIELKLKKVIMRNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLMFQ**********SDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYSTNMKLGVIEDPANRSRLAKLLMFQ**********SDYVKRMKPKQDHIYYIAGA********
*********************************DADAPKVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPI***********************EE*****EKPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDNIKNELKKIELKLKKVIMRNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYSTNMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGAS*******
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MSKVKKGVAHCEDDIIEQTVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxEEKPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTxxxxxxxxxxxxxxxxxxxxxNILLTIQINVFSFSMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLSFIQGIVDSDDLPLNVSRETLQQHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYSTNMKLGVIEDPANRSRLAKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKESYKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query704 2.2.26 [Sep-21-2011]
Q66HD0804 Endoplasmin OS=Rattus nor yes N/A 0.762 0.667 0.528 1e-166
Q95M18804 Endoplasmin OS=Bos taurus yes N/A 0.769 0.674 0.532 1e-165
P08113802 Endoplasmin OS=Mus muscul yes N/A 0.762 0.669 0.528 1e-164
P08110795 Endoplasmin OS=Gallus gal yes N/A 0.757 0.670 0.531 1e-162
P41148804 Endoplasmin OS=Canis fami yes N/A 0.769 0.674 0.522 1e-162
Q29092804 Endoplasmin OS=Sus scrofa yes N/A 0.765 0.670 0.525 1e-161
Q4R520804 Endoplasmin OS=Macaca fas N/A N/A 0.769 0.674 0.519 1e-161
P14625803 Endoplasmin OS=Homo sapie yes N/A 0.769 0.674 0.519 1e-161
Q5R6F7804 Endoplasmin OS=Pongo abel yes N/A 0.769 0.674 0.517 1e-160
O18750716 Endoplasmin (Fragment) OS yes N/A 0.673 0.662 0.524 1e-142
>sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function desciption
 Score =  586 bits (1510), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 315/596 (52%), Positives = 433/596 (72%), Gaps = 59/596 (9%)

Query: 7   GVAHCEDDI-IEQTVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESY 65
           G    +D++ ++ TV+ ++G+SREGSRTD +  + E+E IQLDGLN +Q+ ELR+K+E +
Sbjct: 17  GFVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKF 76

Query: 66  KFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRI 125
            F+AEVNRMMKLIINSLY+NKEIFLRELISNASDALDKIRL+SLTD + L  N EL ++I
Sbjct: 77  AFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKI 136

Query: 126 KADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFG 185
           K D+E  +LH+ D+G+GMT+ +LVKNLGTIAKSGT+EFL++M++ +      +++IGQFG
Sbjct: 137 KCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFG 196

Query: 186 VGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEAS 245
           VGFYSAFLVADKV+VT+K+N D+Q+IWESD++ FS++ DPRG+ L RGT I+L LKEEAS
Sbjct: 197 VGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEAS 256

Query: 246 DFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLEEEAPKDEEKKVEGDEEAKV 305
           D+LE++T+K+L++KYSQFINFPIY+WSSKT  V+EP+E  E+E  ++E+++    ++   
Sbjct: 257 DYLELDTIKNLVRKYSQFINFPIYVWSSKTETVEEPLE--EDETAQEEKEEA---DDEAA 311

Query: 306 EEAEDKEEKPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLT 365
            E E++E+KPKTKKV+KT+WDWE +ND KPIW R   ++ ++EY  FYK+ +K+  DP+ 
Sbjct: 312 VEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMA 371

Query: 366 KIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGT-TTDNIKNELKKI--------------- 409
            IHF AEGEVTFK++LFVP + P+  F+ YG+  +D IK  ++++               
Sbjct: 372 YIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLN 431

Query: 410 ---------------------ELKLKKVI----MRNILLTIQ-----------INVFSFS 433
                                + KL KVI    +R  L  I+              F  +
Sbjct: 432 FVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDTFWKEFGTN 491

Query: 434 MKLGVIEDPANRSRLAKLLMFQSS-SSTEPTSLSDYVKRMKPKQDHIYYIAGASRKEVES 492
           +KLGVIED +NR+RLAKLL FQSS  ST+ TSL  YV+RMK KQD IY++AG+SRKE ES
Sbjct: 492 IKLGVIEDHSNRTRLAKLLRFQSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAES 551

Query: 493 SPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEA 548
           SPFVERLL+KGYE++YL E VDEY + +LPEF+GK+FQN+AKEG+    +++  E+
Sbjct: 552 SPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKES 607
Molecular chaperone that functions in the processing and transport of secreted proteins. Functions in endoplasmic reticulum associated degradation (ERAD). Has ATPase activity.
Rattus norvegicus (taxid: 10116)
>sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|P41148|ENPL_CANFA Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q29092|ENPL_PIG Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3 Back     alignment and function description
>sp|Q4R520|ENPL_MACFA Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q5R6F7|ENPL_PONAB Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|O18750|ENPL_RABIT Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query704
307175086782 Endoplasmin [Camponotus floridanus] 0.781 0.703 0.597 0.0
241997148790 endoplasmin [Locusta migratoria] 0.788 0.702 0.614 0.0
350424665798 PREDICTED: endoplasmin-like [Bombus impa 0.764 0.674 0.593 0.0
340727177798 PREDICTED: LOW QUALITY PROTEIN: endoplas 0.764 0.674 0.592 0.0
332021094798 Endoplasmin [Acromyrmex echinatior] 0.765 0.675 0.599 0.0
156542548790 PREDICTED: endoplasmin-like [Nasonia vit 0.795 0.708 0.573 0.0
307192149791 Endoplasmin [Harpegnathos saltator] 0.751 0.668 0.595 0.0
322799332795 hypothetical protein SINV_11907 [Solenop 0.803 0.711 0.570 0.0
382929292 810 heat shock protein 90 beta [Bombyx mori] 0.764 0.664 0.577 0.0
195503625787 GE23773 [Drosophila yakuba] gi|194184831 0.769 0.688 0.576 0.0
>gi|307175086|gb|EFN65228.1| Endoplasmin [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/614 (59%), Positives = 458/614 (74%), Gaps = 64/614 (10%)

Query: 19  TVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLI 78
           TVD ++G SRE SRTD +A + E+E I++DGLNPAQ++ELR+K+E + F+ EVNRMMKLI
Sbjct: 33  TVDNDLGASREASRTDHEAVQREEEAIKIDGLNPAQIKELREKSEKFAFQTEVNRMMKLI 92

Query: 79  INSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIID 138
           INSLYRNKEI+LRELISNASDALDKIRLLSLTD +VLD N ELAIRIKAD+ENK+LHI+D
Sbjct: 93  INSLYRNKEIYLRELISNASDALDKIRLLSLTDKNVLDTNSELAIRIKADKENKILHIMD 152

Query: 139 SGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKV 198
           SGIGMTK DLV NLGTIAKSGTAEFL +M D  + + D+NDMIGQFGVGFYSA+LVA+ V
Sbjct: 153 SGIGMTKQDLVNNLGTIAKSGTAEFLGKMQDISSTQ-DMNDMIGQFGVGFYSAYLVANVV 211

Query: 199 LVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIK 258
           +VTTK+N+D QYIWESD+S++SIV DPRGD LKRGT +SL LKEEA DFLE +T+K+L+K
Sbjct: 212 VVTTKHNDDKQYIWESDSSNYSIVEDPRGDTLKRGTTVSLHLKEEALDFLEPDTIKNLVK 271

Query: 259 KYSQFINFPIYIWSSKTIQVDEPIEDLEEEAPKDEEKKVEGDEEAKVEEAEDKEEKPKTK 318
           KYSQFINFPIY+W+SK +QVDE  ED+EE+ PK+E+     +EE KVE+A++K    K+K
Sbjct: 272 KYSQFINFPIYLWNSKVVQVDE--EDVEEDKPKEEDV---DEEETKVEDADEK----KSK 322

Query: 319 KVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFK 378
           KVDKT+WDWE LND+KPIWT KP+++ ++EYNEFYK +TKD  +PL KIHFVAEGEVTFK
Sbjct: 323 KVDKTVWDWELLNDSKPIWTIKPSEVEEKEYNEFYKTLTKDNQEPLAKIHFVAEGEVTFK 382

Query: 379 AVLFVPQTQPQDSFNRYGTTTDNIKNELKKIELKLKKV-IMRNILLTIQ---------IN 428
           +VLF+P+ QP DSFNRYGT +DNIK  ++++ +  K   +M N L  I+         +N
Sbjct: 383 SVLFIPKVQPSDSFNRYGTKSDNIKLYVRRVFITDKFTDMMPNYLSFIRGIVDSDDLPLN 442

Query: 429 V----------------------------------------FSFSMKLGVIEDPANRSRL 448
           V                                        +S ++KLG+IED  NR+RL
Sbjct: 443 VSRENLQQHKLIKVIKKKLIRKVLDMIKKLDKEDFQTFWKEYSTNIKLGIIEDAQNRARL 502

Query: 449 AKLLMFQSSSSTEPTSLSDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILY 508
           +KLL FQSS+    T L+DYV RMKP Q +IYYIAGAS  EV+ SPFVERL +KGYE+LY
Sbjct: 503 SKLLQFQSSTQKNLTFLADYVSRMKPNQKYIYYIAGASEDEVQKSPFVERLNKKGYEVLY 562

Query: 509 LVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISAN---KEKMEALK-TLQLYTKSLLRGLC 564
           L EAVDEY +S LPEF+GKKFQN+AKEG S+      KE+ME LK T +  TK L+  L 
Sbjct: 563 LTEAVDEYAISGLPEFDGKKFQNVAKEGFSLDEGERAKERMEQLKTTFEPLTKWLVDLLK 622

Query: 565 LYVRRVFITDEFTD 578
            Y+    +++  TD
Sbjct: 623 EYINIAQVSERLTD 636

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|241997148|gb|ACS75351.1| endoplasmin [Locusta migratoria] Back     alignment and taxonomy information
>gi|350424665|ref|XP_003493872.1| PREDICTED: endoplasmin-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340727177|ref|XP_003401925.1| PREDICTED: LOW QUALITY PROTEIN: endoplasmin-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|332021094|gb|EGI61481.1| Endoplasmin [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|156542548|ref|XP_001599282.1| PREDICTED: endoplasmin-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307192149|gb|EFN75477.1| Endoplasmin [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|322799332|gb|EFZ20720.1| hypothetical protein SINV_11907 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|382929292|gb|AFG30048.1| heat shock protein 90 beta [Bombyx mori] Back     alignment and taxonomy information
>gi|195503625|ref|XP_002098730.1| GE23773 [Drosophila yakuba] gi|194184831|gb|EDW98442.1| GE23773 [Drosophila yakuba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query704
FB|FBgn0039562787 Gp93 "Glycoprotein 93" [Drosop 0.390 0.349 0.677 4e-169
ZFIN|ZDB-GENE-031002-1793 hsp90b1 "heat shock protein 90 0.384 0.341 0.665 3.7e-160
UNIPROTKB|F1NWB7795 HSP90B1 "Endoplasmin" [Gallus 0.384 0.340 0.642 2e-159
UNIPROTKB|P08110795 HSP90B1 "Endoplasmin" [Gallus 0.384 0.340 0.642 2e-159
UNIPROTKB|Q29092804 HSP90B1 "Endoplasmin" [Sus scr 0.392 0.343 0.635 2.6e-159
UNIPROTKB|F1P8N6803 HSP90B1 "Endoplasmin" [Canis l 0.392 0.343 0.631 5.3e-159
UNIPROTKB|P41148804 HSP90B1 "Endoplasmin" [Canis l 0.392 0.343 0.631 5.3e-159
UNIPROTKB|Q95M18804 HSP90B1 "Endoplasmin" [Bos tau 0.390 0.342 0.634 8.7e-159
MGI|MGI:98817802 Hsp90b1 "heat shock protein 90 0.392 0.344 0.628 1.1e-158
RGD|1310482804 Hsp90b1 "heat shock protein 90 0.392 0.343 0.628 1.1e-158
FB|FBgn0039562 Gp93 "Glycoprotein 93" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 967 (345.5 bits), Expect = 4.0e-169, Sum P(3) = 4.0e-169
 Identities = 187/276 (67%), Positives = 234/276 (84%)

Query:     8 VAHCEDDIIEQTVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESYKF 67
             +A  ++    +T+D+++G  +EGSRTDA+  K E+E IQLDGLN AQL+E+R+KA+ + F
Sbjct:    18 IAADDEAATTETIDLDLGSFKEGSRTDAETLKREEEAIQLDGLNVAQLKEIREKAKKFTF 77

Query:    68 EAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKA 127
             + EVNRMMKLIINSLYRNKEIFLRELISNASDA+DKIRLL+L+++  L+ NPEL IRIKA
Sbjct:    78 QTEVNRMMKLIINSLYRNKEIFLRELISNASDAIDKIRLLALSNSKELETNPELHIRIKA 137

Query:   128 DQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKH-DLNDMIGQFGV 186
             D+ENK LHI+DSGIGMT  DL+ NLGTIAKSGTA+FL++M D    +  D+NDMIGQFGV
Sbjct:   138 DKENKALHIMDSGIGMTHQDLINNLGTIAKSGTADFLAKMQDPSKSEGLDMNDMIGQFGV 197

Query:   187 GFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASD 246
             GFYSAFLVAD+V+VTTK+N+D QYIWESDA+SFSI  DPRGD LKRG+ ISL LKEEA D
Sbjct:   198 GFYSAFLVADRVVVTTKHNDDKQYIWESDANSFSITEDPRGDTLKRGSVISLYLKEEAQD 257

Query:   247 FLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPI 282
             FLE +T+++LI+KYSQFINFPI +WSSKT++ + P+
Sbjct:   258 FLEEDTVRELIRKYSQFINFPIRMWSSKTVEEEVPV 293
GO:0051082 "unfolded protein binding" evidence=ISS
GO:0006457 "protein folding" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0006950 "response to stress" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
GO:0005615 "extracellular space" evidence=IDA
GO:0061031 "endodermal digestive tract morphogenesis" evidence=IMP
GO:0007494 "midgut development" evidence=IMP
ZFIN|ZDB-GENE-031002-1 hsp90b1 "heat shock protein 90, beta (grp94), member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWB7 HSP90B1 "Endoplasmin" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P08110 HSP90B1 "Endoplasmin" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P8N6 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:98817 Hsp90b1 "heat shock protein 90, beta (Grp94), member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1310482 Hsp90b1 "heat shock protein 90, beta, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P24724HSP90_THEPANo assigned EC number0.41660.70590.6893yesN/A
Q0J4P2HSP81_ORYSJNo assigned EC number0.45330.66760.6723yesN/A
P02829HSP82_YEASTNo assigned EC number0.41940.72580.7207yesN/A
Q9NKX1ENPL_DICDINo assigned EC number0.42100.71440.6549yesN/A
P41887HSP90_SCHPONo assigned EC number0.43140.68180.6818yesN/A
Q29092ENPL_PIGNo assigned EC number0.52570.76560.6703yesN/A
P15108HSC82_YEASTNo assigned EC number0.41110.72440.7234yesN/A
Q69QQ6HSP82_ORYSJNo assigned EC number0.43480.70730.7124yesN/A
Q25293HSP83_LEIINNo assigned EC number0.43980.65760.6604yesN/A
O18750ENPL_RABITNo assigned EC number0.52440.67320.6620yesN/A
Q4UDU8HSP90_THEANNo assigned EC number0.40340.70880.6911yesN/A
Q95M18ENPL_BOVINNo assigned EC number0.53240.76980.6741yesN/A
P27323HS901_ARATHNo assigned EC number0.45280.65900.6628yesN/A
Q07078HSP83_ORYSJNo assigned EC number0.43480.70730.7124yesN/A
P41148ENPL_CANFANo assigned EC number0.52240.76980.6741yesN/A
O43109HSP90_PODASNo assigned EC number0.44110.63630.6390yesN/A
P14625ENPL_HUMANNo assigned EC number0.51910.76980.6749yesN/A
P08110ENPL_CHICKNo assigned EC number0.53130.75710.6704yesN/A
Q5R6F7ENPL_PONABNo assigned EC number0.51740.76980.6741yesN/A
Q7PT10HSP83_ANOGANo assigned EC number0.41480.71440.6986yesN/A
P08113ENPL_MOUSENo assigned EC number0.52850.76270.6695yesN/A
Q66HD0ENPL_RATNo assigned EC number0.52850.76270.6679yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query704
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 1e-126
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 1e-108
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 8e-99
pfam00183529 pfam00183, HSP90, Hsp90 protein 2e-95
PTZ00130 814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 5e-91
pfam00183 529 pfam00183, HSP90, Hsp90 protein 2e-57
PRK05218 613 PRK05218, PRK05218, heat shock protein 90; Provisi 1e-53
COG0326 623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 2e-46
PTZ00272 701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 5e-38
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 2e-33
PTZ00130 814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 1e-31
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 1e-25
PRK14083601 PRK14083, PRK14083, HSP90 family protein; Provisio 4e-23
PTZ00130814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 9e-15
pfam02518111 pfam02518, HATPase_c, Histidine kinase-, DNA gyras 2e-06
cd00075103 cd00075, HATPase_c, Histidine kinase-like ATPases; 9e-06
PRK14083 601 PRK14083, PRK14083, HSP90 family protein; Provisio 5e-05
smart00387111 smart00387, HATPase_c, Histidine kinase-like ATPas 1e-04
pfam13589134 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr 1e-04
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information 
 Score =  390 bits (1003), Expect = e-126
 Identities = 234/539 (43%), Positives = 330/539 (61%), Gaps = 68/539 (12%)

Query: 63  ESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELA 122
           E++ F+AE+N++M LIIN+ Y NKEIFLRELISNASDA DKIR  SLTD SVL  +P L 
Sbjct: 3   ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLC 62

Query: 123 IRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIG 182
           IR+  D+ENK L + D+GIGMTKADLV NLGTIA+SGT  F+  +    ++      MIG
Sbjct: 63  IRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMS-----MIG 117

Query: 183 QFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDA-SSFSIVNDPRGDNLKRGTQISLELK 241
           QFGVGFYSA+LVAD+V VT+KNN D  Y+WES A  +F+I + P  D +KRGT+I+L LK
Sbjct: 118 QFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESD-MKRGTRITLHLK 176

Query: 242 EEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLEEEAPKDEEKKVEGDE 301
           E+  ++LE   LK+LIKK+S+FI + I +   KT + +   ED E+    DE+      E
Sbjct: 177 EDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADED-----GE 231

Query: 302 EAKVEEAEDKEE--KPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKD 359
           E KVEE ++ +E  K KTKKV +   ++E  N +KP+WTR P D++ EEY  FYKA++ D
Sbjct: 232 EPKVEEVKEGDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISND 291

Query: 360 RTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTDNIKNELKKI---------- 409
             DP    HF  EG++ F++++FVP+  P D F       +NIK  ++++          
Sbjct: 292 WEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEP-NKKRNNIKLYVRRVFIMDNCEDLC 350

Query: 410 --------------------------ELKLKKVIMRNIL-----LTIQI----------- 427
                                     + K+ KVI +NI+     +  ++           
Sbjct: 351 PDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFY 410

Query: 428 NVFSFSMKLGVIEDPANRSRLAKLLMFQSSSSTEP-TSLSDYVKRMKPKQDHIYYIAGAS 486
             F  ++KLG+ ED ANR +L +LL F S+ S E  T+L DYV RMK  Q  IYYI G S
Sbjct: 411 EQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDS 470

Query: 487 RKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEK 545
           +K++E+SPF+E+  R+G E+L++ E +DEY +  + +FE KKF  + KEG+    ++E+
Sbjct: 471 KKKLETSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEE 529

Length = 701
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional Back     alignment and domain information
>gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases Back     alignment and domain information
>gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 704
KOG0020|consensus785 100.0
PTZ00130814 heat shock protein 90; Provisional 100.0
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
KOG0019|consensus656 100.0
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 100.0
PRK05218613 heat shock protein 90; Provisional 100.0
PRK14083601 HSP90 family protein; Provisional 100.0
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
KOG0020|consensus 785 100.0
PF00183 531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 99.97
KOG0019|consensus 656 99.96
PTZ00272 701 heat shock protein 83 kDa (Hsp83); Provisional 99.95
PTZ00130 814 heat shock protein 90; Provisional 99.95
COG0326 623 HtpG Molecular chaperone, HSP90 family [Posttransl 99.94
PRK05218 613 heat shock protein 90; Provisional 99.91
PRK14083 601 HSP90 family protein; Provisional 99.87
PF13589137 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and 99.65
TIGR00585312 mutl DNA mismatch repair protein MutL. All protein 99.35
COG1389538 DNA topoisomerase VI, subunit B [DNA replication, 99.16
PRK04184535 DNA topoisomerase VI subunit B; Validated 99.02
PRK00095617 mutL DNA mismatch repair protein; Reviewed 98.93
COG0323638 MutL DNA mismatch repair enzyme (predicted ATPase) 98.93
TIGR01052488 top6b DNA topoisomerase VI, B subunit. This model 98.86
PRK14868 795 DNA topoisomerase VI subunit B; Provisional 98.7
PF02518111 HATPase_c: Histidine kinase-, DNA gyrase B-, and H 98.4
PRK05559631 DNA topoisomerase IV subunit B; Reviewed 98.31
PRK14867659 DNA topoisomerase VI subunit B; Provisional 98.31
TIGR01055625 parE_Gneg DNA topoisomerase IV, B subunit, proteob 98.07
smart00433594 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras 98.05
PRK14939 756 gyrB DNA gyrase subunit B; Provisional 98.01
TIGR01059654 gyrB DNA gyrase, B subunit. This model describes t 97.98
PRK05644638 gyrB DNA gyrase subunit B; Validated 97.92
KOG1978|consensus672 97.9
KOG1979|consensus694 97.77
smart00387111 HATPase_c Histidine kinase-like ATPases. Histidine 97.1
PRK10755356 sensor protein BasS/PmrB; Provisional 97.08
cd00075103 HATPase_c Histidine kinase-like ATPases; This fami 97.04
TIGR01058637 parE_Gpos DNA topoisomerase IV, B subunit, Gram-po 96.92
TIGR02916679 PEP_his_kin putative PEP-CTERM system histidine ki 96.88
PRK10604433 sensor protein RstB; Provisional 96.87
PRK10549466 signal transduction histidine-protein kinase BaeS; 96.86
KOG1977|consensus 1142 96.85
TIGR01386457 cztS_silS_copS heavy metal sensor kinase. Members 96.81
PRK11006430 phoR phosphate regulon sensor protein; Provisional 96.79
PRK09470461 cpxA two-component sensor protein; Provisional 96.78
TIGR02938494 nifL_nitrog nitrogen fixation negative regulator N 96.75
PRK11100475 sensory histidine kinase CreC; Provisional 96.64
TIGR02966333 phoR_proteo phosphate regulon sensor kinase PhoR. 96.57
PRK15347921 two component system sensor kinase SsrA; Provision 96.41
PRK11086542 sensory histidine kinase DcuS; Provisional 96.38
PRK11360607 sensory histidine kinase AtoS; Provisional 96.29
PRK10815485 sensor protein PhoQ; Provisional 96.28
PRK11466914 hybrid sensory histidine kinase TorS; Provisional 96.26
PRK10364457 sensor protein ZraS; Provisional 96.23
PRK15053545 dpiB sensor histidine kinase DpiB; Provisional 96.2
TIGR02956968 TMAO_torS TMAO reductase sytem sensor TorS. This p 96.19
COG0187635 GyrB Type IIA topoisomerase (DNA gyrase/topo II, t 96.16
PRK09303380 adaptive-response sensory kinase; Validated 96.13
PLN03237 1465 DNA topoisomerase 2; Provisional 96.11
PHA02569602 39 DNA topoisomerase II large subunit; Provisional 95.8
PRK09467435 envZ osmolarity sensor protein; Provisional 95.76
PRK11091779 aerobic respiration control sensor protein ArcB; P 95.73
PLN03128 1135 DNA topoisomerase 2; Provisional 95.67
PRK13837828 two-component VirA-like sensor kinase; Provisional 95.64
TIGR03785703 marine_sort_HK proteobacterial dedicated sortase s 95.59
PRK09835482 sensor kinase CusS; Provisional 95.55
PRK11107919 hybrid sensory histidine kinase BarA; Provisional 95.46
PTZ00109 903 DNA gyrase subunit b; Provisional 95.43
PTZ00108 1388 DNA topoisomerase 2-like protein; Provisional 95.36
PRK10337449 sensor protein QseC; Provisional 95.34
PRK10490895 sensor protein KdpD; Provisional 95.27
PRK10841924 hybrid sensory kinase in two-component regulatory 95.21
PRK10618894 phosphotransfer intermediate protein in two-compon 95.06
COG4191603 Signal transduction histidine kinase regulating C4 94.06
TIGR01925137 spIIAB anti-sigma F factor. This model describes t 94.04
PRK099591197 hybrid sensory histidine kinase in two-component r 93.94
PRK03660146 anti-sigma F factor; Provisional 93.72
PRK10547670 chemotaxis protein CheA; Provisional 93.68
PRK13557540 histidine kinase; Provisional 93.6
COG0642336 BaeS Signal transduction histidine kinase [Signal 93.0
COG3290537 CitA Signal transduction histidine kinase regulati 92.94
PRK04069161 serine-protein kinase RsbW; Provisional 91.63
TIGR01924159 rsbW_low_gc serine-protein kinase RsbW. This model 91.49
PRK10600569 nitrate/nitrite sensor protein NarX; Provisional 89.67
COG5000712 NtrY Signal transduction histidine kinase involved 89.56
COG4585365 Signal transduction histidine kinase [Signal trans 89.46
COG3920221 Signal transduction histidine kinase [Signal trans 88.84
PRK11644495 sensory histidine kinase UhpB; Provisional 88.49
PRK13560807 hypothetical protein; Provisional 87.94
COG0643716 CheA Chemotaxis protein histidine kinase and relat 87.19
PF13581125 HATPase_c_2: Histidine kinase-like ATPase domain 87.13
PRK11073348 glnL nitrogen regulation protein NR(II); Provision 86.95
KOG0787|consensus414 86.28
COG3850574 NarQ Signal transduction histidine kinase, nitrate 81.61
>KOG0020|consensus Back     alignment and domain information 
Probab=100.00  E-value=3e-154  Score=1232.68  Aligned_cols=634  Identities=55%  Similarity=0.888  Sum_probs=559.7

Q ss_pred             cccccccccCCCcCCCCCCCCCchhhhhhhccCCCChhhHHHHhhhccccchHhhHHHHHHHHHhcCCCCChhhHHHhHH
Q psy13233         16 IEQTVDVNIGESREGSRTDADAPKVEKERIQLDGLNPAQLEELRKKAESYKFEAEVNRMMKLIINSLYRNKEIFLRELIS   95 (704)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~e~~~Fqaev~~Ll~LL~~sLYs~~~ifLRELIq   95 (704)
                      ...+++.++|..++|++|++++..|++++|++||++++|.+++|+++++|.|||||+|||+||+||||+|++||||||||
T Consensus        26 ~~~~~ee~~~~~~e~sk~e~e~~~ree~si~lDgl~~~q~kelR~kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELIS  105 (785)
T KOG0020|consen   26 LHATAEEDLGDVTEGSKTEEEIGGREEESIQLDGLNVSQIKELRSKAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELIS  105 (785)
T ss_pred             cccchhhhccccCCCCcchhhhccccchheecccccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Confidence            56689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhcccCCCccCCCCCceEEEEEcCCCcEEEEEeCCCCCCHHHHHHhhchhhccChhhHHHhhhhhhcccc
Q psy13233         96 NASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKH  175 (704)
Q Consensus        96 NA~DA~~k~r~~~ltd~~~~~~~~~l~I~I~~d~~~~~L~I~DNGiGMT~~eL~~~LgtIa~Sgt~~f~~~l~~~~~~~~  175 (704)
                      ||+||++|+|+++|+|+..++.++++.|.|..|++++.|+|+|+|||||++||++||||||+|||++|+++|++.+....
T Consensus       106 NASDAlDKIRllaLtd~~~L~~~~el~ikIK~Dke~klLhi~DtGiGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~  185 (785)
T KOG0020|consen  106 NASDALDKIRLLALTDKDVLGETEELEIKIKADKEKKLLHITDTGIGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEG  185 (785)
T ss_pred             hhhhhhhheeeeeccChhHhCcCcceEEEEeechhhCeeeEecccCCccHHHHHHhhhhhhcccHHHHHHHhhccccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987532112


Q ss_pred             cccccccccccceeeeeeecCEEEEEEEeCCCCcEEEEecCCceEEEeCCCCCCCCCccEEEEEeccchhccCCHHHHHH
Q psy13233        176 DLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKD  255 (704)
Q Consensus       176 d~~~~IGqFGIGFySaFmVAdkV~V~Sk~~~d~~~~Wes~gg~f~I~~~~~~~~~~~GT~I~L~Lked~~e~l~~~~lk~  255 (704)
                      ...++||||||||||||+|||+|+|+|+||++.||+|+|++++|+|.++|++++++|||+|+|||++++.+||++++|++
T Consensus       186 ~~~dlIGQFGVGFYsAfLVAD~vvVtsKhNdD~QyiWESdan~FsvseDprg~tL~RGt~ItL~LkeEA~dyLE~dtlke  265 (785)
T KOG0020|consen  186 LMNDLIGQFGVGFYSAFLVADRVVVTSKHNDDSQYIWESDANSFSVSEDPRGNTLGRGTEITLYLKEEAGDYLEEDTLKE  265 (785)
T ss_pred             hHHHHHHhcchhhhhhhhhcceEEEEeccCCccceeeeccCcceeeecCCCCCcccCccEEEEEehhhhhhhcchhHHHH
Confidence            22579999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCcceEEeccccccccCCcccccccCCcchhccccCcchhhhhhhhccccCccccceeeecccccccccCCC
Q psy13233        256 LIKKYSQFINFPIYIWSSKTIQVDEPIEDLEEEAPKDEEKKVEGDEEAKVEEAEDKEEKPKTKKVDKTIWDWEQLNDNKP  335 (704)
Q Consensus       256 likkys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~~~N~~~~  335 (704)
                      +|++||+||+|||++|.+++.++++|.+|+++.+    ++..+ ++++.|||+  +++|||||+|.+|+|+|+.+|+.+|
T Consensus       266 LvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~----e~~~e-d~ea~vEEe--e~EKpKTKKV~kT~wdWel~NdvKp  338 (785)
T KOG0020|consen  266 LVKKYSQFINFPISLWSSKTVEVEVPVEEEEETE----EDSTE-DKEAAVEEE--EEEKPKTKKVEKTVWDWELLNDVKP  338 (785)
T ss_pred             HHHHHHHhcCCceeeeeccceeeecccccccccc----ccccc-chhhhhhhh--hhccccccchhhcchhhhhhcccch
Confidence            9999999999999999999999999988764321    12222 445566654  3556999999999999999999999


Q ss_pred             cccCCCCCCCHHHHHHHHhhhcCCCCCCceeEeeeeccccceeEEEEecCCCCCccccccc-cccccchhhHHHH-----
Q psy13233        336 IWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYG-TTTDNIKNELKKI-----  409 (704)
Q Consensus       336 ~w~r~~~~vt~eey~~fyk~~~~~~~~~l~~~hf~~eg~~~~~~~l~vp~~~p~d~~~~~~-~~~~~ik~~vkki-----  409 (704)
                      ||+|+|++||++||..|||++++|+.+||+|+||++||+|+||+|||||+.+|.++|+.|+ ++++|||+||+++     
T Consensus       339 IW~R~p~eV~EdEYt~FYkSlsKds~dPma~~HF~aEGeVtFksiLyVP~~~P~~lf~~Yg~~~~dniKLYVrrVFItDe  418 (785)
T KOG0020|consen  339 IWLRKPKEVTEDEYTKFYKSLSKDSTDPMAYIHFTAEGEVTFKSILYVPKKAPRDLFDEYGSKKSDNIKLYVRRVFITDE  418 (785)
T ss_pred             hhccCchhcchHHHHHHHHhhhccccCccceeeeeccccEEEEEEEEeCCCCchHHHHHhccccccceeEEEEEEEecch
Confidence            9999999999999999999999999999999999999999999999999999999999987 7789999998442     


Q ss_pred             -----------------------------------HHHHHHHHHHHhhhh-----------hcccccccccccccccCcc
Q psy13233        410 -----------------------------------ELKLKKVIMRNILLT-----------IQINVFSFSMKLGVIEDPA  443 (704)
Q Consensus       410 -----------------------------------~~~I~k~v~~kl~~~-----------~~~~~fg~~lK~G~~eD~~  443 (704)
                                                         .+-|+|+..+|...+           .+|+.||.+||+|++||++
T Consensus       419 F~dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHkllKvIkKKLvrK~LDmikKia~e~~~d~FW~EFgtniKLGviED~s  498 (785)
T KOG0020|consen  419 FHDMMPKYLSFIKGVVDSDDLPLNVSRETLQQHKLLKVIKKKLVRKVLDMIKKIAGEKYDDIFWKEFGTNIKLGVIEDPS  498 (785)
T ss_pred             HHHHhHHHHHHHhhccCcCcCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHhccceeeeeeeCcc
Confidence                                               333444433333332           2699999999999999999


Q ss_pred             cHHHHHhhhcccccCC-CCCccHHHHHhhcCCCCCeEEEEEcCCHHHHhcChHHHHHHHcCceEEEeccchhHHHhhccc
Q psy13233        444 NRSRLAKLLMFQSSSS-TEPTSLSDYVKRMKPKQDHIYYIAGASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLP  522 (704)
Q Consensus       444 nrekL~~LlrF~Ss~~-~~~~SLdeYv~rmke~Qk~IYYltg~s~~~~~~SP~lE~~k~kG~EVL~l~dpIDe~~i~~l~  522 (704)
                      ||.+||+||||+||.+ ++.+||++||+|||+.|+.||||+|.|+++++.|||+|+|.+|||||||+++|+||||||.|.
T Consensus       499 Nr~rLAKLLrFqss~~~~~~TsLdqYveRMK~kQ~~IyymaGssr~e~E~sPfvERLlkKGyEVi~ltepVDEyciqalp  578 (785)
T KOG0020|consen  499 NRTRLAKLLRFQSSNHPTKITSLDQYVERMKEKQDKIYYMAGSSRKEVEKSPFVERLLKKGYEVIYLTEPVDEYCIQALP  578 (785)
T ss_pred             cHHHHHHHHhhhccCCCCCcccHHHHHHHHhhccccEEEecCCcHhhhccCcHHHHHHhcCceEEEEcchhHHHHHHhhh
Confidence            9999999999999975 678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCceeeccccccCcccchhh-------HHHHHHHHHHHHHhhcccceeEEEEEEccchhhhHHHHHh----------
Q psy13233        523 EFEGKKFQNIAKEGLSISANKEK-------MEALKTLQLYTKSLLRGLCLYVRRVFITDEFTDMLPKYLS----------  585 (704)
Q Consensus       523 ~f~gkkf~~V~k~~l~l~~~ee~-------~e~~~~l~~~~k~~l~~~~~~V~~V~IS~rl~d~~P~~l~----------  585 (704)
                      +|+||+|+||+|+|+.+++.+..       ++++++|+.|++..+-.  ..|.++.||+||+++ ||.|.          
T Consensus       579 e~d~KkFQNVaKEG~k~~~~eK~Ke~~e~l~~~FepL~~W~k~~alk--d~ieka~vSqrL~~s-pcalVas~~GwsgNm  655 (785)
T KOG0020|consen  579 EFDGKKFQNVAKEGVKFDKSEKTKESHEALEEEFEPLTKWLKDKALK--DKIEKAVVSQRLTES-PCALVASQYGWSGNM  655 (785)
T ss_pred             hhcchhHhHHHhhhcccCcccchhHHHHHHHHHHHHHHHHHHhhHHH--HHHHHHHHHHHhccC-chhhhhhhccccccH
Confidence            99999999999999999876422       56899999999886422  348999999999999 99873          


Q ss_pred             ----hhcccccCCCcccc--c-cHHHHh---hChHHHHHHHHHHHHHHHHhhccChHHHHHHHHHhhh-hhcccc-CCCh
Q psy13233        586 ----FIQGIVDSDDLPLN--V-SRETLQ---QHKLLKVIRKKLIRKALDMFKKLDPETYKKFWAEYST-NMKLGV-IEDP  653 (704)
Q Consensus       586 ----~~q~v~d~~~~~~~--~-~r~ile---~h~iI~~l~~~i~~~~~d~~~~l~~e~~~~~~~~~~~-~~k~g~-~~d~  653 (704)
                          .+|+..-+.+..-+  + ++++++   .||+|+.|++++...-      -++...+.+-.+|.| .|++|+ +.|+
T Consensus       656 ERimksqa~~~~kD~~~~~Y~~qKkt~EINPRHPlirell~Ri~ade------eD~t~~d~A~lmf~TAtlrSGf~L~d~  729 (785)
T KOG0020|consen  656 ERIMKSQAYQKSKDPSKNYYASQKKTFEINPRHPLIRELLRRIAADE------EDETVKDTAVLMFETATLRSGFILQDT  729 (785)
T ss_pred             HHHHHHhhhhccCCchhhHHhccCceeeeCCCChHHHHHHHHhhcCc------ccchHHHHHHHHHHHHHhhcCccccch
Confidence                12222222222221  1 334443   8999998888776432      234555788999999 789999 7888


Q ss_pred             -hhHHHHhhhhcc
Q psy13233        654 -ANRSRLAKLLMF  665 (704)
Q Consensus       654 -~~~~~~~~llrf  665 (704)
                       +|..||.+.||-
T Consensus       730 ~~fadrIe~~lr~  742 (785)
T KOG0020|consen  730 KDFADRIENMLRQ  742 (785)
T ss_pred             HHHHHHHHHHHHh
Confidence             899999999985

>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0019|consensus Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
>KOG0019|consensus Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B Back     alignment and domain information
>TIGR00585 mutl DNA mismatch repair protein MutL Back     alignment and domain information
>COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK04184 DNA topoisomerase VI subunit B; Validated Back     alignment and domain information
>PRK00095 mutL DNA mismatch repair protein; Reviewed Back     alignment and domain information
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR01052 top6b DNA topoisomerase VI, B subunit Back     alignment and domain information
>PRK14868 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>PRK05559 DNA topoisomerase IV subunit B; Reviewed Back     alignment and domain information
>PRK14867 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial Back     alignment and domain information
>smart00433 TOP2c TopoisomeraseII Back     alignment and domain information
>PRK14939 gyrB DNA gyrase subunit B; Provisional Back     alignment and domain information
>TIGR01059 gyrB DNA gyrase, B subunit Back     alignment and domain information
>PRK05644 gyrB DNA gyrase subunit B; Validated Back     alignment and domain information
>KOG1978|consensus Back     alignment and domain information
>KOG1979|consensus Back     alignment and domain information
>smart00387 HATPase_c Histidine kinase-like ATPases Back     alignment and domain information
>PRK10755 sensor protein BasS/PmrB; Provisional Back     alignment and domain information
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive Back     alignment and domain information
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase Back     alignment and domain information
>PRK10604 sensor protein RstB; Provisional Back     alignment and domain information
>PRK10549 signal transduction histidine-protein kinase BaeS; Provisional Back     alignment and domain information
>KOG1977|consensus Back     alignment and domain information
>TIGR01386 cztS_silS_copS heavy metal sensor kinase Back     alignment and domain information
>PRK11006 phoR phosphate regulon sensor protein; Provisional Back     alignment and domain information
>PRK09470 cpxA two-component sensor protein; Provisional Back     alignment and domain information
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL Back     alignment and domain information
>PRK11100 sensory histidine kinase CreC; Provisional Back     alignment and domain information
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR Back     alignment and domain information
>PRK15347 two component system sensor kinase SsrA; Provisional Back     alignment and domain information
>PRK11086 sensory histidine kinase DcuS; Provisional Back     alignment and domain information
>PRK11360 sensory histidine kinase AtoS; Provisional Back     alignment and domain information
>PRK10815 sensor protein PhoQ; Provisional Back     alignment and domain information
>PRK11466 hybrid sensory histidine kinase TorS; Provisional Back     alignment and domain information
>PRK10364 sensor protein ZraS; Provisional Back     alignment and domain information
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional Back     alignment and domain information
>TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS Back     alignment and domain information
>COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK09303 adaptive-response sensory kinase; Validated Back     alignment and domain information
>PLN03237 DNA topoisomerase 2; Provisional Back     alignment and domain information
>PHA02569 39 DNA topoisomerase II large subunit; Provisional Back     alignment and domain information
>PRK09467 envZ osmolarity sensor protein; Provisional Back     alignment and domain information
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional Back     alignment and domain information
>PLN03128 DNA topoisomerase 2; Provisional Back     alignment and domain information
>PRK13837 two-component VirA-like sensor kinase; Provisional Back     alignment and domain information
>TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase Back     alignment and domain information
>PRK09835 sensor kinase CusS; Provisional Back     alignment and domain information
>PRK11107 hybrid sensory histidine kinase BarA; Provisional Back     alignment and domain information
>PTZ00109 DNA gyrase subunit b; Provisional Back     alignment and domain information
>PTZ00108 DNA topoisomerase 2-like protein; Provisional Back     alignment and domain information
>PRK10337 sensor protein QseC; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional Back     alignment and domain information
>PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional Back     alignment and domain information
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01925 spIIAB anti-sigma F factor Back     alignment and domain information
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional Back     alignment and domain information
>PRK03660 anti-sigma F factor; Provisional Back     alignment and domain information
>PRK10547 chemotaxis protein CheA; Provisional Back     alignment and domain information
>PRK13557 histidine kinase; Provisional Back     alignment and domain information
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>PRK04069 serine-protein kinase RsbW; Provisional Back     alignment and domain information
>TIGR01924 rsbW_low_gc serine-protein kinase RsbW Back     alignment and domain information
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional Back     alignment and domain information
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] Back     alignment and domain information
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK11644 sensory histidine kinase UhpB; Provisional Back     alignment and domain information
>PRK13560 hypothetical protein; Provisional Back     alignment and domain information
>COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>PF13581 HATPase_c_2: Histidine kinase-like ATPase domain Back     alignment and domain information
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional Back     alignment and domain information
>KOG0787|consensus Back     alignment and domain information
>COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query704
2o1u_A666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 1e-108
2o1u_A 666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 5e-40
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 1e-108
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 5e-40
1u2o_A236 Crystal Structure Of The N-Domain Of Grp94 Lacking 1e-88
1qy5_A269 Crystal Structure Of The N-Domain Of The Er Hsp90 C 8e-88
1u0y_A273 N-Domain Of Grp94, With The Charged Domain, In Comp 1e-87
2esa_A236 Grp94 N-Terminal Domain Bound To Geldanamycin: Effe 1e-87
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 3e-76
2cg9_A 677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 2e-27
3peh_A281 Crystal Structure Of The N-Terminal Domain Of An Hs 8e-68
2jki_A223 Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng 4e-67
2xcm_A214 Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord 3e-66
3h80_A231 Crystal Structure Of The Amino-Terminal Domain Of H 4e-64
3o6o_A214 Crystal Structure Of The N-Terminal Domain Of An Hs 4e-61
3opd_A231 Crystal Structure Of The N-Terminal Domain Of An Hs 4e-61
4gqt_A227 N-Terminal Domain Of C. Elegans Hsp90 Length = 227 5e-61
3k60_B223 Crystal Structure Of N-Terminal Domain Of Plasmodiu 9e-61
4eeh_A229 Hsp90 Alpha N-Terminal Domain In Complex With An In 2e-60
3inw_A228 Hsp90 N-Terminal Domain With Pochoxime A Length = 2 2e-60
2fwy_A256 Structure Of Human Hsp90-Alpha Bound To The Potent 2e-60
3qdd_A237 Hsp90a N-Terminal Domain In Complex With Biib021 Le 2e-60
2xdu_A236 Structre Of Hsp90 With Small Molecule Inhibitor Bou 2e-60
3bm9_A226 Discovery Of Benzisoxazoles As Potent Inhibitors Of 2e-60
2bsm_A235 Novel, Potent Small Molecule Inhibitors Of The Mole 2e-60
1uy6_A236 Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- 2e-60
3hhu_A224 Human Heat-Shock Protein 90 (Hsp90) In Complex With 3e-60
3d0b_A232 Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz 3e-60
2yi0_A229 Structural Characterization Of 5-Aryl-4-(5-Substitu 3e-60
3k98_A232 Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C 3e-60
3eko_A226 Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 3e-60
1uyi_A236 Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F 3e-60
3ft5_A249 Structure Of Hsp90 Bound With A Novel Fragment Leng 3e-60
4egh_A232 Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox 3e-60
4awo_A230 Complex Of Hsp90 Atpase Domain With Tropane Derived 3e-60
3b24_A229 Hsp90 Alpha N-Terminal Domain In Complex With An Am 3e-60
3k97_A251 Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- 4e-60
3r4m_A228 Optimization Of Potent, Selective, And Orally Bioav 4e-60
2jjc_A218 Hsp90 Alpha Atpase Domain With Bound Small Molecule 4e-60
2ye2_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 4e-60
2xjj_A249 Structre Of Hsp90 With Small Molecule Inhibitor Bou 5e-60
2ccs_A236 Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py 5e-60
3tuh_A209 Crystal Structure Of The N-Terminal Domain Of An Hs 5e-60
2ye7_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 5e-60
1osf_A215 Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D 6e-60
2xjg_A249 Structure Of Hsp90 With Small Molecule Inhibitor Bo 6e-60
1byq_A228 Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 7e-60
1yc1_A264 Crystal Structures Of Human Hsp90alpha Complexed Wi 7e-60
2yjw_A209 Tricyclic Series Of Hsp90 Inhibitors Length = 209 9e-60
2qfo_A207 Hsp90 Complexed With A143571 And A516383 Length = 2 1e-59
2k5b_A210 Human Cdc37-Hsp90 Docking Model Based On Nmr Length 2e-59
2qf6_A207 Hsp90 Complexed With A56322 Length = 207 2e-59
1uym_A220 Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho 2e-59
3nmq_A239 Hsp90b N-Terminal Domain In Complex With Ec44, A Py 2e-59
1ah8_A220 Structure Of The Orthorhombic Form Of The N-Termina 3e-59
1a4h_A230 Structure Of The N-Terminal Domain Of The Yeast Hsp 3e-59
1zw9_A240 Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit 3e-59
2bre_A219 Structure Of A Hsp90 Inhibitor Bound To The N-Termi 3e-59
2yee_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 3e-59
2wep_A220 Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp 8e-59
2cgf_A225 A Radicicol Analogue Bound To The Atp Binding Site 2e-58
3c0e_A240 Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 2e-58
2yge_A220 E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel 2e-58
1bgq_A225 Radicicol Bound To The Atp Binding Site Of The N-Te 3e-58
1us7_A214 Complex Of Hsp90 And P50 Length = 214 3e-58
2xx2_A214 Macrolactone Inhibitor Bound To Hsp90 N-Term Length 3e-58
1am1_A213 Atp Binding Site In The Hsp90 Molecular Chaperone L 3e-58
2ygf_A220 L89v, L93i And V136m Mutant Of N-term Hsp90 Complex 4e-58
2yga_A220 E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel 6e-58
2iop_A624 Crystal Structure Of Full-Length Htpg, The Escheric 2e-53
2iop_A 624 Crystal Structure Of Full-Length Htpg, The Escheric 6e-23
1y4s_A559 Conformation Rearrangement Of Heat Shock Protein 90 2e-53
1y4s_A 559 Conformation Rearrangement Of Heat Shock Protein 90 7e-23
2akp_A186 Hsp90 Delta24-n210 Mutant Length = 186 2e-49
3ied_A272 Crystal Structure Of N-Terminal Domain Of Plasmodiu 4e-46
2ior_A235 Crystal Structure Of The N-Terminal Domain Of Htpg, 2e-42
2o1t_A 450 Structure Of Middle Plus C-Terminal Domains (M+c) O 2e-39
3q6m_A 448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 2e-27
2cge_A 405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 2e-27
3pry_A268 Crystal Structure Of The Middle Domain Of Human Hsp 3e-27
1hk7_A288 Middle Domain Of Hsp90 Length = 288 3e-27
1usv_A260 The Structure Of The Complex Between Aha1 And Hsp90 4e-27
1usu_A260 The Structure Of The Complex Between Aha1 And Hsp90 5e-27
3hjc_A 444 Crystal Structure Of The Carboxy-Terminal Domain Of 3e-26
2gq0_A303 Crystal Structure Of The Middle Domain Of Htpg, The 2e-22
1y6z_A263 Middle Domain Of Plasmodium Falciparum Putative Hea 1e-20
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure 
Iteration: 1

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/336 (54%), Positives = 241/336 (71%), Gaps = 42/336 (12%)
Query: 62  AESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPEL 121
           +E + F+AEVNRMMKLIINSLY+NKEIFLRELISNASDALDKIRL+SLTD + L  N EL
Sbjct: 22  SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEEL 81
Query: 122 AIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMI 181
            ++IK D+E  +LH+ D+G+GMT+ +LVKNLGTIAKSGT+EFL++M++ +      +++I
Sbjct: 82  TVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELI 141
Query: 182 GQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELK 241
           GQFGVGFYSAFLVADKV+VT+K+N D+Q+IWESD++ FS++ DPRG+ L RGT I+L LK
Sbjct: 142 GQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLK 201
Query: 242 EEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIXXXXXXXXXXXXXXXXXXX 301
           EEASD+LE++T+K+L+KKYSQFINFPIY+WSSKT                          
Sbjct: 202 EEASDYLELDTIKNLVKKYSQFINFPIYVWSSKT-------------------------- 235
Query: 302 XXXXXXXXXXXXXXXXXXXXXXIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRT 361
                                 +WDWE +ND KPIW R   ++ D+EY  FYK+ +K+  
Sbjct: 236 ----------------GGGGKTVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESD 279
Query: 362 DPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGT 397
           DP+  IHF AEGEVTFK++LFVP + P+  F+ YG+
Sbjct: 280 DPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGS 315
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 Back     alignment and structure
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 Back     alignment and structure
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 Back     alignment and structure
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 Back     alignment and structure
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 Back     alignment and structure
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 Back     alignment and structure
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 Back     alignment and structure
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 Back     alignment and structure
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 Back     alignment and structure
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 Back     alignment and structure
>pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 Back     alignment and structure
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 Back     alignment and structure
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 Back     alignment and structure
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 Back     alignment and structure
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 Back     alignment and structure
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 Back     alignment and structure
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 Back     alignment and structure
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 Back     alignment and structure
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 Back     alignment and structure
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 Back     alignment and structure
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 Back     alignment and structure
>pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 Back     alignment and structure
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 Back     alignment and structure
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 Back     alignment and structure
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 Back     alignment and structure
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 Back     alignment and structure
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 Back     alignment and structure
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 Back     alignment and structure
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 Back     alignment and structure
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 Back     alignment and structure
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 Back     alignment and structure
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 Back     alignment and structure
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 Back     alignment and structure
>pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 Back     alignment and structure
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 Back     alignment and structure
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 Back     alignment and structure
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 Back     alignment and structure
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 Back     alignment and structure
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 Back     alignment and structure
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 Back     alignment and structure
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 Back     alignment and structure
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 Back     alignment and structure
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 Back     alignment and structure
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 Back     alignment and structure
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 Back     alignment and structure
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 Back     alignment and structure
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 Back     alignment and structure
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 Back     alignment and structure
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 Back     alignment and structure
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 Back     alignment and structure
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 Back     alignment and structure
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 Back     alignment and structure
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 Back     alignment and structure
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 Back     alignment and structure
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 Back     alignment and structure
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 Back     alignment and structure
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 Back     alignment and structure
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 Back     alignment and structure
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 Back     alignment and structure
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 Back     alignment and structure
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 Back     alignment and structure
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 Back     alignment and structure
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query704
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 0.0
2cg9_A 677 ATP-dependent molecular chaperone HSP82; chaperone 1e-56
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 0.0
2o1u_A 666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 2e-63
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 0.0
1y4s_A 559 Chaperone protein HTPG; HSP90, molecular chaperone 7e-63
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 0.0
2ioq_A 624 Chaperone protein HTPG; heat shock protein, HSP90; 2e-62
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 1e-140
3peh_A281 Endoplasmin homolog; structural genomics, structur 1e-132
3peh_A281 Endoplasmin homolog; structural genomics, structur 2e-07
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 1e-127
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 1e-125
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 1e-123
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 1e-123
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 1e-121
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 1e-119
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 1e-112
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 8e-94
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 7e-76
3hjc_A 444 Heat shock protein 83-1; sleeping sickness, struct 1e-66
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 4e-73
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 5e-71
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 1e-71
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 1e-70
1y6z_A263 Heat shock protein, putative; chaperone, structura 1e-70
1y6z_A263 Heat shock protein, putative; chaperone, structura 6e-70
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 1e-70
3q6m_A 448 Heat shock protein HSP 90-alpha; three domains, tr 5e-68
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 4e-70
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 5e-69
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 4e-70
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 5e-68
2cge_A 405 ATP-dependent molecular chaperone HSP82; chaperone 1e-68
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 4e-68
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
 Score =  592 bits (1527), Expect = 0.0
 Identities = 225/543 (41%), Positives = 332/543 (61%), Gaps = 61/543 (11%)

Query: 62  AESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPEL 121
           +E+++F+AE+ ++M LIIN++Y NKEIFLRELISNASDALDKIR  SL+D   L+  P+L
Sbjct: 3   SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62

Query: 122 AIRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMI 181
            IRI    E K+L I DSGIGMTKA+L+ NLGTIAKSGT  F+  +S   ++      MI
Sbjct: 63  FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADV-----SMI 117

Query: 182 GQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDA-SSFSIVNDPRGDNLKRGTQISLEL 240
           GQFGVGFYS FLVAD+V V +K+N+D QYIWES+A  SF++  D   + + RGT + L L
Sbjct: 118 GQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFL 177

Query: 241 KEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLEEEAPKDEEKKVEGD 300
           K++  ++LE   +K++IK++S+F+ +PI +  +K ++ + PI + E++  + ++++ + +
Sbjct: 178 KDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDE 237

Query: 301 EEAK---VEEAEDKEEKPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMT 357
           ++ K    E  E++E+KPKTKKV + + + E+LN  KP+WTR P+DI+ EEYN FYK+++
Sbjct: 238 DDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSIS 297

Query: 358 KDRTDPLTKIHFVAEGEVTFKAVLFVPQTQPQDSFNRYGTTTD----------------- 400
            D  DPL   HF  EG++ F+A+LF+P+  P D F       +                 
Sbjct: 298 NDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDL 357

Query: 401 -------------------NIKNEL---KKIELKLKKVIMRNILLTIQ------------ 426
                              N+  E+    KI   ++K I++ ++                
Sbjct: 358 IPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKF 417

Query: 427 INVFSFSMKLGVIEDPANRSRLAKLLMFQSS-SSTEPTSLSDYVKRMKPKQDHIYYIAGA 485
            + FS ++KLGV ED  NR+ LAKLL + S+ S  E TSL+DYV RM   Q +IYYI G 
Sbjct: 418 YSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGE 477

Query: 486 SRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEK 545
           S K VE SPF++ L  K +E+L+L + +DEY  + L EFEGK   +I K+      ++EK
Sbjct: 478 SLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEK 537

Query: 546 MEA 548
            E 
Sbjct: 538 AER 540
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query704
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 100.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 100.0
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
3peh_A281 Endoplasmin homolog; structural genomics, structur 100.0
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 100.0
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 100.0
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 100.0
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 100.0
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 100.0
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 100.0
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 100.0
1y6z_A263 Heat shock protein, putative; chaperone, structura 100.0
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 100.0
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 100.0
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 100.0
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 100.0
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 99.97
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 99.97
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 99.97
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 99.97
1y6z_A263 Heat shock protein, putative; chaperone, structura 99.97
3hjc_A 444 Heat shock protein 83-1; sleeping sickness, struct 99.97
3q6m_A 448 Heat shock protein HSP 90-alpha; three domains, tr 99.96
2cge_A 405 ATP-dependent molecular chaperone HSP82; chaperone 99.96
2cg9_A 677 ATP-dependent molecular chaperone HSP82; chaperone 99.95
2o1u_A 666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 99.94
1y4s_A 559 Chaperone protein HTPG; HSP90, molecular chaperone 99.93
2ioq_A 624 Chaperone protein HTPG; heat shock protein, HSP90; 99.93
1b63_A333 MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A 99.6
1h7s_A365 PMS1 protein homolog 2; DNA repair, GHL ATPase, mi 99.52
3h4l_A367 DNA mismatch repair protein PMS1; ATP binding, DNA 99.41
3na3_A348 DNA mismatch repair protein MLH1; MUTL protein hom 99.27
3fv5_A201 DNA topoisomerase 4 subunit B; topoisomerase IV B 98.9
1mu5_A471 Type II DNA topoisomerase VI subunit B; GHKL ATPas 98.76
1kij_A390 DNA gyrase subunit B; topoisomerase, gyrase B-coum 98.72
2zbk_B530 Type 2 DNA topoisomerase 6 subunit B; DNA binding 98.7
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 98.64
1s16_A390 Topoisomerase IV subunit B; two-domain protein com 98.49
2q2e_B621 Type 2 DNA topoisomerase 6 subunit B; DNA-binding, 98.45
3cwv_A369 DNA gyrase, B subunit, truncated; structural genom 98.38
4duh_A220 DNA gyrase subunit B; structure-based drug design, 98.32
1zxm_A400 TOPO IIA ATPase, DNA topoisomerase II, alpha isozy 98.32
1ei1_A391 DNA gyrase B, GYRB; ATPase domain, dimer, isomeras 98.29
4emv_A226 DNA topoisomerase IV, B subunit; protein-inhibitor 98.27
3lnu_A408 Topoisomerase IV subunit B; PARE, ATP-binding, nuc 97.94
3ttz_A198 DNA gyrase subunit B; protein-inhibitor complex, A 97.84
1pvg_A418 DNA topoisomerase II; GHKL ATPase domain; HET: DNA 97.46
1i58_A189 Chemotaxis protein CHEA; beta-alpha sandwich, sign 97.33
2btz_A394 Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo 97.25
3jz3_A222 Sensor protein QSEC; helix-turn-helix, kinase doma 97.24
1id0_A152 PHOQ histidine kinase; PHOQ/PHOP, signal transduct 97.24
4ew8_A268 Sensor protein DIVL; signal transduction, two-comp 97.23
1ysr_A150 Sensor-type histidine kinase PRRB; ATP-binding dom 97.18
3sl2_A177 Sensor histidine kinase YYCG; ATP binding, intact 97.17
2e0a_A394 Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP 97.13
3d36_A244 Sporulation kinase B; GHKL ATPase, four helix bund 97.12
2q8g_A407 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 97.09
1y8o_A419 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 97.08
3a0y_A152 Sensor protein; ATP-LID, kinase, phosphoprotein, t 97.07
1th8_A145 Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s 97.02
2c2a_A258 Sensor histidine kinase; phosphotransfer, PHOQ, se 96.92
1gkz_A388 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] 96.9
1bxd_A161 ENVZ(290-450), protein (osmolarity sensor protein 96.88
1b3q_A379 Protein (chemotaxis protein CHEA); histine kinase, 96.47
4gfh_A 1177 DNA topoisomerase 2; topoisomerase, protein-DNA co 96.44
3ehg_A128 Sensor kinase (YOCF protein); GHL ATPase domain, t 95.78
3ehh_A218 Sensor kinase (YOCF protein); four-helix bundle, G 95.6
3zxq_A124 Hypoxia sensor histidine kinase response regulato; 95.21
1r62_A160 Nitrogen regulation protein NR(II); PII, histidine 94.91
3zxo_A129 Redox sensor histidine kinase response regulator; 94.76
3a0r_A349 Sensor protein; four helix bundle, PAS fold, kinas 93.93
4fpp_A247 Phosphotransferase; four helix bundle, bergerat fo 86.78
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=1e-126  Score=1093.32  Aligned_cols=587  Identities=43%  Similarity=0.710  Sum_probs=469.6

Q ss_pred             ccccchHhhHHHHHHHHHhcCCCCChhhHHHhHHhHHHHHHHHHhhcccCCCccCCCCCceEEEEEcCCCcEEEEEeCCC
Q psy13233         62 AESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGI  141 (704)
Q Consensus        62 ~e~~~Fqaev~~Ll~LL~~sLYs~~~ifLRELIqNA~DA~~k~r~~~ltd~~~~~~~~~l~I~I~~d~~~~~L~I~DNGi  141 (704)
                      .|+|.||||+++||+||+++||||+++|||||||||+||++++||+++++|++++..+++.|+|.+|+++++|+|+|||+
T Consensus         3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi   82 (677)
T 2cg9_A            3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI   82 (677)
T ss_dssp             CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred             ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEECCC
Confidence            47899999999999999999999999999999999999999999999999999888888999999999889999999999


Q ss_pred             CCCHHHHHHhhchhhccChhhHHHhhhhhhcccccccccccccccceeeeeeecCEEEEEEEeCCCCcEEEEecC-CceE
Q psy13233        142 GMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDA-SSFS  220 (704)
Q Consensus       142 GMT~~eL~~~LgtIa~Sgt~~f~~~l~~~~~~~~d~~~~IGqFGIGFySaFmVAdkV~V~Sk~~~d~~~~Wes~g-g~f~  220 (704)
                      |||++||.++|++||+||+++|+++++++    .+ ..+|||||||||||||||++|+|+||++++.++.|+++| +.|+
T Consensus        83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~~----~d-~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~t  157 (677)
T 2cg9_A           83 GMTKAELINNLGTIAKSGTKAFMEALSAG----AD-VSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFT  157 (677)
T ss_dssp             CCCHHHHHGGGSSSSSCTTHHHHSCCCSS----CC-CCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEE
T ss_pred             CCCHHHHHHHHHhHhccccHHHHHhhhcc----cc-hhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEE
Confidence            99999999999999999999999888754    34 689999999999999999999999999987899999998 8999


Q ss_pred             EEeCCCCCCCCCccEEEEEeccchhccCCHHHHHHHHHHhcccCCcceEEeccccccccCCcccccccC--Ccchhcccc
Q psy13233        221 IVNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLEEEA--PKDEEKKVE  298 (704)
Q Consensus       221 I~~~~~~~~~~~GT~I~L~Lked~~e~l~~~~lk~likkys~fi~~PI~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  298 (704)
                      |.+++.+...++||+|+|||++++.+||+.++|+++|++||+||+|||+++..++.+.+++.+++++++  .++++++++
T Consensus       158 i~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~  237 (677)
T 2cg9_A          158 VTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDE  237 (677)
T ss_dssp             EEECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC---------------------
T ss_pred             EeecCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhccccccccccccc
Confidence            998643456789999999999999999999999999999999999999999776655554332211100  000001111


Q ss_pred             Ccchhhhhhhh-ccccCccccceeeecccccccccCCCcccCCCCCCCHHHHHHHHhhhcCCCCCCceeEeeeeccccce
Q psy13233        299 GDEEAKVEEAE-DKEEKPKTKKVDKTIWDWEQLNDNKPIWTRKPADISDEEYNEFYKAMTKDRTDPLTKIHFVAEGEVTF  377 (704)
Q Consensus       299 ~~~~~~~~~~~-~~~~~~k~k~~~~~~~~~~~~N~~~~~w~r~~~~vt~eey~~fyk~~~~~~~~~l~~~hf~~eg~~~~  377 (704)
                      +++++++++.. ++++++|+|++++++++|+.+|+.+|||+|+|++||+|||.+|||++++||++||+|+||++||+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~  317 (677)
T 2cg9_A          238 DDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEF  317 (677)
T ss_dssp             ------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCE
T ss_pred             cccccccccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceE
Confidence            12223333321 11245678888898999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEecCCCCCccccccccccccchhhH--------------------------------------------HHHHHHH
Q psy13233        378 KAVLFVPQTQPQDSFNRYGTTTDNIKNEL--------------------------------------------KKIELKL  413 (704)
Q Consensus       378 ~~~l~vp~~~p~d~~~~~~~~~~~ik~~v--------------------------------------------kki~~~I  413 (704)
                      +||||||+++|+|+|++. +.+++||+||                                            ++|+++|
T Consensus       318 ~~lLyiP~~ap~d~~~~~-~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l  396 (677)
T 2cg9_A          318 RAILFIPKRAPFDLFESK-KKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNI  396 (677)
T ss_dssp             EEEEEECSSCCC----------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHHH
T ss_pred             EEEEEEcCCCchhhhhhh-hccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHHH
Confidence            999999999999999852 4567888886                                            4567788


Q ss_pred             HHHHHHHhhhhh--------cccccccccccccccCcccHHHHHhhhcccccCC-CCCccHHHHHhhcCCCCCeEEEEEc
Q psy13233        414 KKVIMRNILLTI--------QINVFSFSMKLGVIEDPANRSRLAKLLMFQSSSS-TEPTSLSDYVKRMKPKQDHIYYIAG  484 (704)
Q Consensus       414 ~k~v~~kl~~~~--------~~~~fg~~lK~G~~eD~~nrekL~~LlrF~Ss~~-~~~~SLdeYv~rmke~Qk~IYYltg  484 (704)
                      +|+|.+.|.+++        +|++||++||+|+++|+.||++|++||||+||.+ ++++||+|||+|||++|+.|||++|
T Consensus       397 ~kkvl~~l~~la~~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~  476 (677)
T 2cg9_A          397 VKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITG  476 (677)
T ss_dssp             HHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceEEEEeC
Confidence            888888887765        4999999999999999999999999999999975 5799999999999999999999999


Q ss_pred             CCHHHHhcChHHHHHHHcCceEEEeccchhHHHhhccccccCCceeeccccccCcccchh-------hHHHHHHHHHHHH
Q psy13233        485 ASRKEVESSPFVERLLRKGYEILYLVEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKE-------KMEALKTLQLYTK  557 (704)
Q Consensus       485 ~s~~~~~~SP~lE~~k~kG~EVL~l~dpIDe~~i~~l~~f~gkkf~~V~k~~l~l~~~ee-------~~e~~~~l~~~~k  557 (704)
                      +|++++++|||+|.|++||||||||+||||||||++|.+|+|++|++|+++ ++|+++++       .++++++|+.+++
T Consensus       477 ~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~~~~~~~~~~~~~L~~~~k  555 (677)
T 2cg9_A          477 ESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPLTKALK  555 (677)
T ss_dssp             SCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSSTTHHHHHGGGHHHHHHHH
T ss_pred             CCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhhhhhhhhhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 99875421       1447889999999


Q ss_pred             HhhcccceeEEEEEEccchhhhHHHHHh--------------hhcccccCCCccccccHHHHh---hChHHHHHHHHHHH
Q psy13233        558 SLLRGLCLYVRRVFITDEFTDMLPKYLS--------------FIQGIVDSDDLPLNVSRETLQ---QHKLLKVIRKKLIR  620 (704)
Q Consensus       558 ~~l~~~~~~V~~V~IS~rl~d~~P~~l~--------------~~q~v~d~~~~~~~~~r~ile---~h~iI~~l~~~i~~  620 (704)
                      ++|++.   |.+|++|.||+++ |||+.              .+|++.+...+.++..+++|+   +||||+.|++....
T Consensus       556 ~~L~~~---v~~V~~s~rl~~s-P~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~~  631 (677)
T 2cg9_A          556 EILGDQ---VEKVVVSYKLLDA-PAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDE  631 (677)
T ss_dssp             HTTCSS---CSCEECCSSCSSS-CEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHHT
T ss_pred             HhcCCc---ceEEEEeccCCCC-CEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhhc
Confidence            999975   9999999999998 99973              122222322222333455555   99999998754321


Q ss_pred             HHHHHhhccChHHHHHHHHHhhh-hhcccc-CCCh-hhHHHHhhhhc
Q psy13233        621 KALDMFKKLDPETYKKFWAEYST-NMKLGV-IEDP-ANRSRLAKLLM  664 (704)
Q Consensus       621 ~~~d~~~~l~~e~~~~~~~~~~~-~~k~g~-~~d~-~~~~~~~~llr  664 (704)
                      .     ..-++..-+.++.+|++ .|-.|+ ++|| ++.+|+.+||.
T Consensus       632 d-----~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~  673 (677)
T 2cg9_A          632 G-----GAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLIS  673 (677)
T ss_dssp             C-----CSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSS
T ss_pred             c-----ccCHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence            0     00111223557899999 668888 9999 89999999985
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* Back     alignment and structure
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* Back     alignment and structure
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} Back     alignment and structure
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} Back     alignment and structure
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* Back     alignment and structure
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* Back     alignment and structure
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} Back     alignment and structure
>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} Back     alignment and structure
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* Back     alignment and structure
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* Back     alignment and structure
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* Back     alignment and structure
>3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* Back     alignment and structure
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* Back     alignment and structure
>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* Back     alignment and structure
>1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* Back     alignment and structure
>2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* Back     alignment and structure
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} Back     alignment and structure
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A Back     alignment and structure
>4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} Back     alignment and structure
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A Back     alignment and structure
>3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} Back     alignment and structure
>2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* Back     alignment and structure
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} Back     alignment and structure
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A Back     alignment and structure
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* Back     alignment and structure
>3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A Back     alignment and structure
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* Back     alignment and structure
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* Back     alignment and structure
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* Back     alignment and structure
>1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 Back     alignment and structure
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A Back     alignment and structure
>4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} Back     alignment and structure
>3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} Back     alignment and structure
>3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* Back     alignment and structure
>3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 Back     alignment and structure
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} Back     alignment and structure
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 704
d2gqpa1227 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) 3e-72
d1uyla_208 d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 1e-61
d2iwxa1213 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo 1e-60
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 8e-47
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 4e-33
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Dog (Canis familiaris) [TaxId: 9615]

 Score =  231 bits (591), Expect = 3e-72
 Identities = 147/224 (65%), Positives = 190/224 (84%)

Query: 63  ESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELA 122
           E + F+AEVNRMMKLIINSLY+NKEIFLRELISNASDALDKIRL+SLTD + L  N EL 
Sbjct: 1   EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELT 60

Query: 123 IRIKADQENKMLHIIDSGIGMTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIG 182
           ++IK D+E  +LH+ D+G+GMT+ +LVKNLGTIAKSGT+EFL++M++ +      +++IG
Sbjct: 61  VKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIG 120

Query: 183 QFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDASSFSIVNDPRGDNLKRGTQISLELKE 242
           QFGVGFYSAFLVADKV+VT+K+N D+Q+IWESD++ FS++ DPRG+ L RGT I+L LKE
Sbjct: 121 QFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKE 180

Query: 243 EASDFLEVNTLKDLIKKYSQFINFPIYIWSSKTIQVDEPIEDLE 286
           EASD+LE++T+K+L+KKYSQFINFPIY+WSSKT    + + D E
Sbjct: 181 EASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTVWDWE 224
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query704
d2gqpa1227 HSP90 {Dog (Canis familiaris) [TaxId: 9615]} 100.0
d2iwxa1213 HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T 100.0
d1uyla_208 HSP90 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 100.0
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 99.96
d2hkja3219 Topoisomerase VI-B subunit {Archaeon Sulfolobus sh 99.25
d1h7sa2203 DNA mismatch repair protein PMS2 {Human (Homo sapi 99.2
d1b63a2218 DNA mismatch repair protein MutL {Escherichia coli 98.92
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 98.59
d1pvga2239 DNA topoisomerase II {Baker's yeast (Saccharomyces 97.93
d1kija2212 DNA gyrase B {Thermus thermophilus [TaxId: 274]} 97.74
d1ei1a2219 DNA gyrase B {Escherichia coli [TaxId: 562]} 97.5
d1jm6a2190 Pyruvate dehydrogenase kinase {Rat (Rattus norvegi 97.5
d1gkza2193 Branched-chain alpha-ketoacid dehydrogenase kinase 97.46
d1y8oa2125 Pyruvate dehydrogenase kinase {Human (Homo sapiens 97.33
d2c2aa2161 Sensor histidine kinase TM0853 {Thermotoga maritim 97.21
d1id0a_146 Histidine kinase PhoQ domain {Escherichia coli [Ta 97.11
d1bxda_161 Histidine kinase domain of the osmosensor EnvZ {Es 96.93
d1ysra1148 Sensor-type histidine kinase PrrB {Mycobacterium t 96.79
d1th8a_139 Anti-sigma factor spoIIab {Bacillus stearothermoph 96.48
d1s14a_168 Topoisomerase IV subunit B {Escherichia coli [TaxI 95.55
d1ixma_179 Sporulation response regulatory protein Spo0B {Bac 95.14
d1r62a_156 Nitrogen regulation protein NtrB, C-terminal domai 88.07
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=100.00  E-value=3.5e-61  Score=487.39  Aligned_cols=210  Identities=67%  Similarity=1.060  Sum_probs=177.5

Q ss_pred             cccchHhhHHHHHHHHHhcCCCCChhhHHHhHHhHHHHHHHHHhhcccCCCccCCCCCceEEEEEcCCCcEEEEEeCCCC
Q psy13233         63 ESYKFEAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDASVLDANPELAIRIKADQENKMLHIIDSGIG  142 (704)
Q Consensus        63 e~~~Fqaev~~Ll~LL~~sLYs~~~ifLRELIqNA~DA~~k~r~~~ltd~~~~~~~~~l~I~I~~d~~~~~L~I~DNGiG  142 (704)
                      |++.||||+++||+||+++|||||+||||||||||+|||+|+|+++++++.......++.|.|.+|+++++|+|+|||||
T Consensus         1 e~~~Fq~e~~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~~~~~~~i~i~~d~~~~~l~i~DnGiG   80 (227)
T d2gqpa1           1 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVG   80 (227)
T ss_dssp             TEECCCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred             CceeeehhHHHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCcccccccchhhhhcccCCCCcEEEEEecCcc
Confidence            67999999999999999999999999999999999999999999999998877777889999999999999999999999


Q ss_pred             CCHHHHHHhhchhhccChhhHHHhhhhhhcccccccccccccccceeeeeeecCEEEEEEEeCCCCcEEEEecC-CceEE
Q psy13233        143 MTKADLVKNLGTIAKSGTAEFLSQMSDKENIKHDLNDMIGQFGVGFYSAFLVADKVLVTTKNNEDSQYIWESDA-SSFSI  221 (704)
Q Consensus       143 MT~~eL~~~LgtIa~Sgt~~f~~~l~~~~~~~~d~~~~IGqFGIGFySaFmVAdkV~V~Sk~~~d~~~~Wes~g-g~f~I  221 (704)
                      ||++||.++|||||+||++.|+++++.......+..++||||||||||||||||+|+|+|+++++.++.|.|+| +.|++
T Consensus        81 Mt~~e~~~~lgtIa~Sgt~~f~~~~~~~~~~~~~~~~~IGqFGvGfyS~FmVad~V~v~s~~~~~~~~~W~s~g~~~~~i  160 (227)
T d2gqpa1          81 MTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVI  160 (227)
T ss_dssp             CCHHHHHHHHHCC---------------------CHHHHHHTTCGGGGGGGTEEEEEEEEECTTSCCEEEEESSSCEEEE
T ss_pred             ccHHHHHHHHHHHhhcchHHHHHhhhhcccccccchhhhhhcCcceeEEEeeeeeEEEEEeccCCcccEEEecCCCceec
Confidence            99999999999999999999998876432111122579999999999999999999999999988899999999 88998


Q ss_pred             EeCCCCCCCCCccEEEEEeccchhccCCHHHHHHHHHHhcccCCcceEEecc
Q psy13233        222 VNDPRGDNLKRGTQISLELKEEASDFLEVNTLKDLIKKYSQFINFPIYIWSS  273 (704)
Q Consensus       222 ~~~~~~~~~~~GT~I~L~Lked~~e~l~~~~lk~likkys~fi~~PI~l~~~  273 (704)
                      ... .++..+|||+|+|||++++.+|+++++|+++|++||+||+|||+|+..
T Consensus       161 ~~~-~~~~~~rGT~I~L~Lk~d~~efl~~~rl~~iIkkYs~fI~~PI~l~~~  211 (227)
T d2gqpa1         161 ADP-RGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSS  211 (227)
T ss_dssp             ECT-TCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEEEEEE
T ss_pred             ccc-cccccccceEEEEEecccchhhcCHHHHHHHHHHHhcCCCCCeEeCcc
Confidence            764 345678999999999999999999999999999999999999999743
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} Back     information, alignment and structure
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure