Psyllid ID: psy13291

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------9
Protein Sequence
MKKKKKKKKKKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKVD
Secondary Structure (PSIPRED)
cccccccccccccccccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHcccccccEEEEEEEEEccEEEEEEccHHccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHcccccccHEEEEccccHHEEEEEEccccHHHHHHHHHcccEEEEccccccEEEEEEEEEccccEEEHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mkkkkkkkkkkpelglarldpdsewsfrITFTVNTQEHKRLLTDldicmrssdcahTVQFYGAMFREGDVWICMEVMDTsldkfytkvd
Flexible Loop (DISEMBL)
mkkkkkkkkkkpelglarldpdsewsFRITftvntqehKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTsldkfytkvd
Low Complexity Region (SEG)
MkkkkkkkkkkPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKVD
Disordered region (IsUnstruct)
***********************EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY****
Disordered Region (DISOPRED)
*******************DPDSEWSFRITFT****E*KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV*
Disordered Region (DISEMBL)
*************LGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKVD
Disordered Region (DISPRO)
********KKKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKVD
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKKKKKKKKKKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKVD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	89	2.2.26 [Sep-21-2011]
O09110	347	Dual specificity mitogen-	yes	N/A	0.685	0.175	0.786	2e-22
Q9DGE0	361	Dual specificity mitogen-	yes	N/A	0.685	0.168	0.770	3e-22
P46734	347	Dual specificity mitogen-	yes	N/A	0.685	0.175	0.770	5e-22
Q5E9X2	334	Dual specificity mitogen-	yes	N/A	0.685	0.182	0.754	5e-22
P52564	334	Dual specificity mitogen-	no	N/A	0.685	0.182	0.754	6e-22
P70236	334	Dual specificity mitogen-	no	N/A	0.685	0.182	0.737	8e-22
P45985	399	Dual specificity mitogen-	no	N/A	0.685	0.152	0.672	5e-19
P47809	397	Dual specificity mitogen-	no	N/A	0.685	0.153	0.672	6e-19
Q07192	446	Dual specificity mitogen-	N/A	N/A	0.685	0.136	0.672	9e-19
Q23977	1178	Dual specificity mitogen-	no	N/A	0.595	0.044	0.471	9e-10

>sp|O09110|MP2K3_MOUSE Dual specificity mitogen-activated protein kinase kinase 3 OS=Mus musculus GN=Map2k3 PE=1 SV=2

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 52/61 (85%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVNTQE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct: 94  RIRATVNTQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query: 88  V 88
           V
Sbjct: 154 V 154

Dual specificity kinase. Is activated by cytokines and environmental stress in vivo. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinase p38.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 2

>sp|Q9DGE0|MP2K6_DANRE Dual specificity mitogen-activated protein kinase kinase 6 OS=Danio rerio GN=map2k6 PE=1 SV=2

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVNTQE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 110 RIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKQ 169

Query: 88  V 88
           V
Sbjct: 170 V 170

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Phosphorylation by MAP2K6 asymmetrically activates p38 on one side of the blastodisc, an event which is necessary for blastomere cleavage.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P46734|MP2K3_HUMAN Dual specificity mitogen-activated protein kinase kinase 3 OS=Homo sapiens GN=MAP2K3 PE=1 SV=2

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVN+QE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct: 94  RIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query: 88  V 88
           V
Sbjct: 154 V 154

Dual specificity kinase. Is activated by cytokines and environmental stress in vivo. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinase p38.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q5E9X2|MP2K6_BOVIN Dual specificity mitogen-activated protein kinase kinase 6 OS=Bos taurus GN=MAP2K6 PE=2 SV=1

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 51/61 (83%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVN+QE KRLL DLDI MR+ DC  TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 83  RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQ 142

Query: 88  V 88
           V
Sbjct: 143 V 143

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P52564|MP2K6_HUMAN Dual specificity mitogen-activated protein kinase kinase 6 OS=Homo sapiens GN=MAP2K6 PE=1 SV=1

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 51/61 (83%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVN+QE KRLL DLDI MR+ DC  TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 83  RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQ 142

Query: 88  V 88
           V
Sbjct: 143 V 143

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P70236|MP2K6_MOUSE Dual specificity mitogen-activated protein kinase kinase 6 OS=Mus musculus GN=Map2k6 PE=1 SV=1

 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 51/61 (83%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVN+QE KRLL DLD+ MR+ DC  TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 83  RIRATVNSQEQKRLLMDLDVSMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQ 142

Query: 88  V 88
           V
Sbjct: 143 V 143

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P45985|MP2K4_HUMAN Dual specificity mitogen-activated protein kinase kinase 4 OS=Homo sapiens GN=MAP2K4 PE=1 SV=1

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 48/61 (78%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TV+ +E K+LL DLD+ MRSSDC + VQFYGA+FREGD WICME+M TS DKFY  
Sbjct: 132 RIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKY 191

Query: 88  V 88
           V
Sbjct: 192 V 192

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K7/MKK7, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The phosphorylation of the Thr residue by MAP2K7/MKK7 seems to be the prerequisite for JNK activation at least in response to proinflammatory cytokines, while other stimuli activate both MAP2K4/MKK4 and MAP2K7/MKK7 which synergistically phosphorylate JNKs. MAP2K4 is required for maintaining peripheral lymphoid homeostasis. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis. Whereas MAP2K7/MKK7 exclusively activates JNKs, MAP2K4/MKK4 additionally activates the p38 MAPKs MAPK11, MAPK12, MAPK13 and MAPK14.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P47809|MP2K4_MOUSE Dual specificity mitogen-activated protein kinase kinase 4 OS=Mus musculus GN=Map2k4 PE=1 SV=2

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 48/61 (78%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TV+ +E K+LL DLD+ MRSSDC + VQFYGA+FREGD WICME+M TS DKFY  
Sbjct: 130 RIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKY 189

Query: 88  V 88
           V
Sbjct: 190 V 190

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K7/MKK7, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The phosphorylation of the Thr residue by MAP2K7/MKK7 seems to be the prerequisite for JNK activation at least in response to proinflammatory cytokines, while other stimuli activate both MAP2K4/MKK4 and MAP2K7/MKK7 which synergistically phosphorylate JNKs. MAP2K4 is required for maintaining peripheral lymphoid homeostasis. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis. Whereas MAP2K7/MKK7 exclusively activates JNKs, MAP2K4/MKK4 additionally activates the p38 MAPKs MAPK11, MAPK12, MAPK13 and MAPK14.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q07192|MP2K2_XENLA Dual specificity mitogen-activated protein kinase kinase 2 (Fragment) OS=Xenopus laevis GN=map2k2 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 48/61 (78%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TV+ +E K+LL DLD+ MRSSDC + VQFYGA+FREGD WICME+M TS DKFY  
Sbjct: 179 RIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMATSFDKFYKY 238

Query: 88  V 88
           V
Sbjct: 239 V 239

Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q23977|HEP_DROME Dual specificity mitogen-activated protein kinase kinase hemipterous OS=Drosophila melanogaster GN=hep PE=1 SV=2

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 35/53 (66%)

Query: 32  TVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKF 84
           T N +E+KR+L DLD+ ++S DC + V+  G   R+ DVWICME+M    DK 
Sbjct: 231 TGNAEENKRILMDLDVVLKSHDCKYIVKCLGCFVRDPDVWICMELMSMCFDKL 283

Required for the epithelial cell sheet movement called dorsal closure (DC), which allows establishment of the dorsal epidermis. Controls the expression in the dorsal epithelium edges of another dorsal closure gene, puckered (puc). Phosphorylates and activates the MAP kinase bsk; bsk signal transduction pathway mediates an immune response and morphogenesis.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	89
91088903	334	PREDICTED: similar to licorne CG12244-PA	0.685	0.182	0.852	3e-24
307167495	336	Dual specificity mitogen-activated prote	0.685	0.181	0.852	1e-23
156551854	338	PREDICTED: dual specificity mitogen-acti	0.685	0.180	0.852	2e-23
383857956	336	PREDICTED: dual specificity mitogen-acti	0.685	0.181	0.852	2e-23
242015216	337	cAMP-dependent protein kinase catalytic	0.685	0.181	0.852	2e-23
340724219	333	PREDICTED: dual specificity mitogen-acti	0.685	0.183	0.852	3e-23
350423336	333	PREDICTED: dual specificity mitogen-acti	0.685	0.183	0.852	3e-23
332027156	276	Dual specificity mitogen-activated prote	0.685	0.221	0.836	4e-23
193702398	338	PREDICTED: dual specificity mitogen-acti	0.685	0.180	0.836	6e-23
307211914	335	Dual specificity mitogen-activated prote	0.685	0.182	0.836	7e-23

>gi|91088903|ref|XP_972852.1| PREDICTED: similar to licorne CG12244-PA [Tribolium castaneum] gi|270011581|gb|EFA08029.1| hypothetical protein TcasGA2_TC005618 [Tribolium castaneum]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 55/61 (90%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVNTQE KRLLTDLD+ MRSSDC +TVQFYGA+FREGDVWICMEVMDTSLDKFY K
Sbjct: 79  RIAATVNTQEQKRLLTDLDVSMRSSDCPYTVQFYGALFREGDVWICMEVMDTSLDKFYAK 138

Query: 88  V 88
           V
Sbjct: 139 V 139

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167495|gb|EFN61068.1| Dual specificity mitogen-activated protein kinase kinase 6 [Camponotus floridanus]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 55/61 (90%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RIT TVNTQE KRLL DLDI MRSS C++TVQFYGA+FREGDVWICMEVMD SLDKFYTK
Sbjct: 78  RITATVNTQEQKRLLMDLDISMRSSACSYTVQFYGALFREGDVWICMEVMDMSLDKFYTK 137

Query: 88  V 88
           V
Sbjct: 138 V 138

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156551854|ref|XP_001604546.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 3-like [Nasonia vitripennis]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 54/61 (88%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RIT TVNTQE KRLL DLDI MR SDC +TVQFYGA+FREGDVWICMEVMD SLDKFYTK
Sbjct: 80  RITATVNTQEQKRLLMDLDISMRCSDCPYTVQFYGALFREGDVWICMEVMDMSLDKFYTK 139

Query: 88  V 88
           V
Sbjct: 140 V 140

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857956|ref|XP_003704469.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 6-like [Megachile rotundata]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 54/61 (88%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RIT TVNTQE KRLL DLDI MRSS C +TVQFYGA+FREGDVWICMEVMD SLDKFYTK
Sbjct: 78  RITATVNTQEQKRLLMDLDISMRSSACQYTVQFYGALFREGDVWICMEVMDMSLDKFYTK 137

Query: 88  V 88
           V
Sbjct: 138 V 138

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015216|ref|XP_002428268.1| cAMP-dependent protein kinase catalytic subunit, putative [Pediculus humanus corporis] gi|212512842|gb|EEB15530.1| cAMP-dependent protein kinase catalytic subunit, putative [Pediculus humanus corporis]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 54/61 (88%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVNTQE KRLL DLDI MRSSDC +TVQFYGA+FREGDVWICMEVMDTSLDKFY K
Sbjct: 81  RIAATVNTQEQKRLLMDLDISMRSSDCQYTVQFYGALFREGDVWICMEVMDTSLDKFYHK 140

Query: 88  V 88
           V
Sbjct: 141 V 141

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724219|ref|XP_003400481.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 6-like [Bombus terrestris]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 54/61 (88%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RIT TVNTQE KRLL DLDI MRSS C +TVQFYGA+FREGDVWICMEVMD SLDKFYTK
Sbjct: 78  RITATVNTQEQKRLLMDLDISMRSSACQYTVQFYGALFREGDVWICMEVMDMSLDKFYTK 137

Query: 88  V 88
           V
Sbjct: 138 V 138

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423336|ref|XP_003493448.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 6-like [Bombus impatiens]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 54/61 (88%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RIT TVNTQE KRLL DLDI MRSS C +TVQFYGA+FREGDVWICMEVMD SLDKFYTK
Sbjct: 78  RITATVNTQEQKRLLMDLDISMRSSACQYTVQFYGALFREGDVWICMEVMDMSLDKFYTK 137

Query: 88  V 88
           V
Sbjct: 138 V 138

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027156|gb|EGI67249.1| Dual specificity mitogen-activated protein kinase kinase 6 [Acromyrmex echinatior]

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/61 (83%), Positives = 53/61 (86%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVNTQE KRLL DLDI MRSS C +TVQFYGA+FREGDVWICMEVMD SLDKFYTK
Sbjct: 78  RIAATVNTQEQKRLLMDLDISMRSSACPYTVQFYGALFREGDVWICMEVMDMSLDKFYTK 137

Query: 88  V 88
           V
Sbjct: 138 V 138

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193702398|ref|XP_001952170.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 6-like [Acyrthosiphon pisum]

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/61 (83%), Positives = 52/61 (85%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVNTQE KRLL DLDI MRSS C HTVQFYGA+F EGDVWICMEVMDTSLDKFY K
Sbjct: 79  RIAATVNTQEQKRLLMDLDISMRSSACPHTVQFYGALFMEGDVWICMEVMDTSLDKFYAK 138

Query: 88  V 88
           V
Sbjct: 139 V 139

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211914|gb|EFN87841.1| Dual specificity mitogen-activated protein kinase kinase 6 [Harpegnathos saltator]

 Score =  110 bits (276), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/61 (83%), Positives = 54/61 (88%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RIT TVNTQE KRLL DLDI MRSS C++TVQFYGA+FREGDVWICMEVMD SLDKFY K
Sbjct: 77  RITATVNTQEQKRLLMDLDISMRSSACSYTVQFYGALFREGDVWICMEVMDMSLDKFYMK 136

Query: 88  V 88
           V
Sbjct: 137 V 137

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	89
UNIPROTKB|F1NHE1	258	MAP2K3 "Uncharacterized protei	0.685	0.236	0.786	1.5e-21
UNIPROTKB|F1NMX4	346	MAP2K3 "Uncharacterized protei	0.685	0.176	0.786	1.5e-21
MGI|MGI:1346868	347	Map2k3 "mitogen-activated prot	0.685	0.175	0.786	2.4e-21
ZFIN|ZDB-GENE-010202-3	363	map2k6 "mitogen-activated prot	0.685	0.168	0.770	3.9e-21
UNIPROTKB|F1PXD3	347	MAP2K3 "Uncharacterized protei	0.685	0.175	0.770	6.3e-21
UNIPROTKB|F1PXD8	347	MAP2K3 "Uncharacterized protei	0.685	0.175	0.770	6.3e-21
UNIPROTKB|E9PRZ0	160	MAP2K3 "Dual-specificity mitog	0.685	0.381	0.770	6.3e-21
UNIPROTKB|J3QR49	173	MAP2K3 "Dual-specificity mitog	0.685	0.352	0.770	6.3e-21
UNIPROTKB|P46734	347	MAP2K3 "Dual specificity mitog	0.685	0.175	0.770	6.3e-21
UNIPROTKB|A4IFH7	347	MAP2K3 "Uncharacterized protei	0.685	0.175	0.754	8e-21

UNIPROTKB|F1NHE1 MAP2K3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 48/61 (78%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVNTQE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:     5 RIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKK 64

Query:    88 V 88
             V
Sbjct:    65 V 65

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

UNIPROTKB|F1NMX4 MAP2K3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 48/61 (78%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVNTQE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    93 RIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKK 152

Query:    88 V 88
             V
Sbjct:   153 V 153

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

MGI|MGI:1346868 Map2k3 "mitogen-activated protein kinase kinase 3" [Mus musculus (taxid:10090)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 48/61 (78%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVNTQE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    94 RIRATVNTQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query:    88 V 88
             V
Sbjct:   154 V 154

GO:0000165 "MAPK cascade" evidence=IMP;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IDA;IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IMP;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006954 "inflammatory response" evidence=IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019901 "protein kinase binding" evidence=ISO;IPI

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IMP

GO:0045860 "positive regulation of protein kinase activity" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0060048 "cardiac muscle contraction" evidence=IMP

ZFIN|ZDB-GENE-010202-3 map2k6 "mitogen-activated protein kinase kinase 6" [Danio rerio (taxid:7955)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVNTQE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct:   112 RIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKQ 171

Query:    88 V 88
             V
Sbjct:   172 V 172

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1PXD3 MAP2K3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVN+QE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    94 RIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query:    88 V 88
             V
Sbjct:   154 V 154

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1PXD8 MAP2K3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVN+QE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    94 RIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query:    88 V 88
             V
Sbjct:   154 V 154

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E9PRZ0 MAP2K3 "Dual-specificity mitogen-activated protein kinase kinase 3" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVN+QE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    65 RIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 124

Query:    88 V 88
             V
Sbjct:   125 V 125

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

UNIPROTKB|J3QR49 MAP2K3 "Dual-specificity mitogen-activated protein kinase kinase 3" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVN+QE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    94 RIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query:    88 V 88
             V
Sbjct:   154 V 154

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P46734 MAP2K3 "Dual specificity mitogen-activated protein kinase kinase 3" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVN+QE KRLL DLDI MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    94 RIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query:    88 V 88
             V
Sbjct:   154 V 154

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045860 "positive regulation of protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=IPI

GO:0007165 "signal transduction" evidence=TAS

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0051403 "stress-activated MAPK cascade" evidence=TAS

UNIPROTKB|A4IFH7 MAP2K3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/61 (75%), Positives = 52/61 (85%)

Query:    28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
             RI  TVN+QE KRLL DLD+ MR+ DC +TV FYGA+FREGDVWICME+MDTSLDKFY K
Sbjct:    94 RIRATVNSQEQKRLLMDLDVNMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRK 153

Query:    88 V 88
             V
Sbjct:   154 V 154

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9DGE0	MP2K6_DANRE	2, ., 7, ., 1, 2, ., 2	0.7704	0.6853	0.1689	yes	N/A
Q5E9X2	MP2K6_BOVIN	2, ., 7, ., 1, 2, ., 2	0.7540	0.6853	0.1826	yes	N/A
O09110	MP2K3_MOUSE	2, ., 7, ., 1, 2, ., 2	0.7868	0.6853	0.1757	yes	N/A
P46734	MP2K3_HUMAN	2, ., 7, ., 1, 2, ., 2	0.7704	0.6853	0.1757	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	89
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	7e-37
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-26
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-18
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-15
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-09
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-07
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.001
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.002
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.003

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score =  124 bits (314), Expect = 7e-37
 Identities = 49/61 (80%), Positives = 52/61 (85%)

Query: 28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
          RI  TVN+QE KRLL DLDI MRS DC +TV FYGA+FREGDVWICMEVMDTSLDKFY K
Sbjct: 33 RIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKK 92

Query: 88 V 88
          V
Sbjct: 93 V 93

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 97.8 bits (244), Expect = 2e-26
 Identities = 42/61 (68%), Positives = 49/61 (80%)

Query: 28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
          RI  TV+ +E KRLL DLD+ MRSSDC + V+FYGA+FREGD WICME+MD SLDKFY  
Sbjct: 36 RIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKY 95

Query: 88 V 88
          V
Sbjct: 96 V 96

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 75.8 bits (187), Expect = 2e-18
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD-TSLDKFYT 86
           I   +N    K++L +LDI  +  +  + V FYGA +  GD+ ICME MD  SLDK   
Sbjct: 33 TIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILK 91

Query: 87 KV 88
          +V
Sbjct: 92 EV 93

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 67.4 bits (165), Expect = 5e-15
 Identities = 26/57 (45%), Positives = 39/57 (68%)

Query: 32  TVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88
           T N +E+KR+L DLD+ ++S DC + V+ YG    + DV+ICME+M T LDK   ++
Sbjct: 51  TGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRI 107

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 50.3 bits (121), Expect = 7e-09
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 29 ITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD 78
          I    + +  K+LL +L   +RS +  + V+ YGA ++EG++ I +E MD
Sbjct: 34 IHVDGDEEFRKQLLRELKT-LRSCESPYVVKCYGAFYKEGEISIVLEYMD 82

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 50.2 bits (120), Expect = 8e-09
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 39 KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87
          K++L +L I M      + V FYGA   E ++ +CME MD  SLD+ Y K
Sbjct: 48 KQILRELQI-MHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK 96

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 41 LLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85
          ++ +LDI  ++    + V FYGA F EG V++CME MD  SLDK Y
Sbjct: 46 IIMELDILHKAVS-PYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLY 90

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 29 ITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD--VWICMEVMDT-SLDKFY 85
          IT   N    K++L +L+I  +S    + V++YGA   E    + I ME  +  SLD  Y
Sbjct: 34 ITTDPNPDLQKQILRELEI-NKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIY 92

Query: 86 TKV 88
           KV
Sbjct: 93 KKV 95

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 39.3 bits (92), Expect = 5e-05
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 56 HTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88
          + V FYGA + +G++ ICME MD  SLD+   K 
Sbjct: 60 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 93

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 49 MRSSDCAHTVQFYGAMFREGDVWICME 75
          ++  D  + V++YG+ F+  D+WI ME
Sbjct: 52 LKQCDSPYIVKYYGSYFKNTDLWIVME 78

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 52 SDCAH--TVQFYGAMFREGDVWICMEVMD 78
            C H   V++YG+  ++ ++WI ME   
Sbjct: 52 KKCKHPNIVKYYGSYLKKDELWIVMEFCS 80

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 36.4 bits (84), Expect = 6e-04
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 29 ITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD-TSLDKF 84
          I   +  +  K+++++L+I  +  D  + + FYGA F E  + IC E MD  SLD +
Sbjct: 34 IPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICTEFMDGGSLDVY 89

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 53 DCAH--TVQFYGAMFREGDVWICME 75
          +C H   V ++G+  R   +WI ME
Sbjct: 56 ECRHPNIVAYFGSYLRRDKLWIVME 80

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 56 HTVQFYGAMFREGDVWICMEVMD-TSLDKFYTK 87
          + V FYGA + +G++ ICME MD  SLD+   K
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 96

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)

Query: 56 HTVQFYGAMFREGDVWICMEVMD-TSLDK 83
          + V FYGA + +G++ ICME MD  SLD+
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGGSLDQ 92

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	89
KOG0581|consensus	364		99.72
KOG0595|consensus	429		99.67
KOG0615|consensus	475		99.55
KOG0582|consensus	516		99.53
KOG0575|consensus	592		99.5
KOG0611|consensus	668		99.47
KOG0610|consensus	459		99.43
KOG0586|consensus	596		99.42
KOG1006|consensus	361		99.39
KOG0577|consensus	948		99.38
KOG0578|consensus	550		99.38
KOG4717|consensus	864		99.38
KOG0574|consensus	502		99.38
KOG0588|consensus	786		99.37
KOG0194|consensus	474		99.36
KOG0201|consensus	467		99.36
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.36
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.35
KOG0032|consensus	382		99.33
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.33
KOG0984|consensus	282		99.33
KOG1026|consensus	774		99.33
KOG0196|consensus	996		99.33
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.31
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.31
KOG0192|consensus	362		99.31
KOG0600|consensus	560		99.3
KOG0583|consensus	370		99.3
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.3
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.29
KOG0587|consensus	953		99.29
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.28
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.28
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.28
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.27
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.27
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.27
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.27
KOG0605|consensus	550		99.27
KOG1094|consensus	807		99.26
KOG0616|consensus	355		99.26
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.26
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.26
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.26
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.25
KOG0597|consensus	808		99.25
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.25
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.25
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.25
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.24
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.24
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.24
KOG0198|consensus	313		99.24
KOG0591|consensus	375		99.24
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.24
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.24
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.23
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.23
KOG1989|consensus	738		99.23
KOG0659|consensus	318		99.22
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.22
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.22
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.22
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.22
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.22
KOG0607|consensus	463		99.22
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.21
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.21
KOG0589|consensus	426		99.21
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.21
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.21
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.2
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.2
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.2
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.2
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.2
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.2
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.2
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.2
KOG1095|consensus	1025		99.19
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.19
KOG0197|consensus	468		99.19
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.19
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.19
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.19
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.19
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.18
PHA02988	283	hypothetical protein; Provisional	99.18
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.18
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.18
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.18
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.18
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.18
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.17
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.17
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.17
KOG1187|consensus	361		99.17
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.17
KOG0598|consensus	357		99.16
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.16
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.16
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.16
PTZ00267	478	NIMA-related protein kinase; Provisional	99.16
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.16
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.16
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.16
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.15
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.15
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.14
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.14
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.14
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.14
KOG0580|consensus	281		99.14
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.14
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.13
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.13
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.13
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.13
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.13
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.13
KOG0593|consensus	396		99.13
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.13
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.13
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.12
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.12
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.12
KOG0694|consensus	694		99.12
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.12
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.11
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.11
KOG0585|consensus	576		99.11
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.11
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.11
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.11
KOG0661|consensus	538		99.11
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.11
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.11
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.11
KOG0663|consensus	419		99.1
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.1
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.1
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.1
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.1
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.1
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.09
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.09
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.09
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.08
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.08
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.08
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.08
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.08
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.08
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.08
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.08
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.07
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.07
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.07
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.07
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.07
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.07
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.07
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.07
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.06
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.06
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.06
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.06
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.06
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.06
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.06
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.06
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.06
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.05
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.05
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.05
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.05
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.05
KOG0579|consensus	1187		99.05
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.04
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.04
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.04
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.04
KOG0983|consensus	391		99.04
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.04
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.04
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.03
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.03
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.03
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.03
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.03
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.03
KOG4278|consensus	1157		99.03
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.02
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.02
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.02
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.02
KOG0660|consensus	359		99.02
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.02
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.01
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.01
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.01
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.01
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.01
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.01
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.01
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.99
KOG4250|consensus	732		98.99
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.99
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.99
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.99
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.99
KOG0592|consensus	604		98.99
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.99
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.99
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.99
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.99
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.99
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.98
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.98
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.98
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.97
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.97
PLN00009	294	cyclin-dependent kinase A; Provisional	98.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.97
KOG4236|consensus	888		98.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.96
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.96
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.96
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.96
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.95
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.94
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.93
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.93
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.92
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.92
KOG0576|consensus	829		98.92
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.92
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.91
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.91
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.91
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.9
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.9
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.9
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.9
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.9
KOG0667|consensus	586		98.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.89
KOG0599|consensus	411		98.89
KOG0033|consensus	355		98.89
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.89
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.89
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.89
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.88
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.88
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.88
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.87
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.87
PHA03212	391	serine/threonine kinase US3; Provisional	98.87
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.86
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.86
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.86
KOG0594|consensus	323		98.86
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.86
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.86
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.85
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.85
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.85
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.84
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.84
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.83
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.83
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.83
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.82
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.82
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.82
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.81
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.81
KOG4721|consensus	904		98.81
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.79
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.79
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.79
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.79
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.78
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.78
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.78
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.78
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.78
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.77
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.77
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.77
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.77
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.76
PTZ00283	496	serine/threonine protein kinase; Provisional	98.75
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.75
KOG4645|consensus	1509		98.75
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.74
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.74
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.74
KOG0662|consensus	292		98.73
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.73
KOG1027|consensus	903		98.72
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.72
PRK10345	210	hypothetical protein; Provisional	98.72
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.71
PTZ00036	440	glycogen synthase kinase; Provisional	98.71
KOG4257|consensus	974		98.71
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.7
KOG0200|consensus	609		98.7
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.7
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.7
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.69
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.68
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.68
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.67
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.67
PHA03211	461	serine/threonine kinase US3; Provisional	98.66
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.65
KOG0199|consensus	1039		98.65
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.65
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.65
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.65
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.65
PHA03209	357	serine/threonine kinase US3; Provisional	98.64
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.64
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.63
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.62
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.62
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.61
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.6
KOG4279|consensus	1226		98.59
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.59
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.58
KOG1151|consensus	775		98.58
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.57
KOG0658|consensus	364		98.56
PRK09188	365	serine/threonine protein kinase; Provisional	98.56
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.56
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.55
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.53
KOG0596|consensus	677		98.52
KOG0612|consensus	1317		98.51
KOG1035|consensus	1351		98.51
KOG0584|consensus	632		98.49
KOG0690|consensus	516		98.48
KOG0604|consensus	400		98.48
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.46
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.45
PHA03207	392	serine/threonine kinase US3; Provisional	98.43
KOG0695|consensus	593		98.41
KOG2052|consensus	513		98.4
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.4
KOG0696|consensus	683		98.39
KOG0666|consensus	438		98.34
KOG3653|consensus	534		98.3
KOG1152|consensus	772		98.21
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.2
KOG2345|consensus	302		98.16
KOG0608|consensus	1034		98.14
PTZ00284	467	protein kinase; Provisional	98.12
KOG0193|consensus	678		98.09
PRK14879	211	serine/threonine protein kinase; Provisional	98.06
KOG0668|consensus	338		98.06
KOG1025|consensus	1177		98.06
KOG1345|consensus	378		98.05
KOG1167|consensus	418		98.05
KOG1290|consensus	590		98.01
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.96
KOG0603|consensus	612		97.92
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.86
PHA03210	501	serine/threonine kinase US3; Provisional	97.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.76
KOG0614|consensus	732		97.75
KOG0665|consensus	369		97.74
KOG1163|consensus	341		97.53
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.53
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.41
KOG0670|consensus	752		97.36
PRK12274	218	serine/threonine protein kinase; Provisional	97.36
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.23
KOG0195|consensus	448		97.2
KOG0669|consensus	376		97.2
smart00090	237	RIO RIO-like kinase.	97.16
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.08
KOG0986|consensus	591		97.08
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.02
PLN03224	507	probable serine/threonine protein kinase; Provisio	96.97
KOG0671|consensus	415		96.85
KOG1164|consensus	322		96.67
KOG0664|consensus	449		96.45
KOG1243|consensus	690		96.27
KOG1165|consensus	449		96.21
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.18
KOG3741|consensus	655		96.03
PHA02882	294	putative serine/threonine kinase; Provisional	95.87
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.86
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	95.8
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	95.6
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.47
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.05
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	94.64
PLN02876	822	acyl-CoA dehydrogenase	94.51
KOG1024|consensus	563		93.58
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	91.49
KOG1023|consensus	484		91.19
KOG1166|consensus	974		90.42
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	89.41
KOG0603|consensus	612		88.04
PRK09550	401	mtnK methylthioribose kinase; Reviewed	87.86
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	87.75
PF01636	239	APH: Phosphotransferase enzyme family This family	87.42
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	85.21
KOG0576|consensus	829		84.06
KOG3087|consensus	229		81.41
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	80.87

>KOG0581|consensus

Probab=99.72  E-value=7.4e-17  Score=107.81  Aligned_cols=76  Identities=26%  Similarity=0.386  Sum_probs=70.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~   87 (89)
                      -|+.|.|+.|+..+|+|.|..+.+....+++.+|++++... +||+||.|||+|..++ .+.|+||||++ ||+++++.
T Consensus        94 ~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~  171 (364)
T KOG0581|consen   94 TVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR  171 (364)
T ss_pred             EEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh
Confidence            37899999999999999997777777889999999999885 9999999999999999 59999999999 99999985

>KOG0595|consensus

Probab=99.67  E-value=5.1e-16  Score=105.09  Aligned_cols=77  Identities=13%  Similarity=0.123  Sum_probs=68.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .|+.+.++.++..||||.|.... .....+-+..|+.+|.. +.|||||+++++...++.+|+|||||+| +|.++|++.
T Consensus        25 vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLke-l~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~  103 (429)
T KOG0595|consen   25 VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKE-LKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR  103 (429)
T ss_pred             EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHh-cCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc
Confidence            47899999999999999997653 45567788999999988 5899999999999999999999999999 999999864

>KOG0615|consensus

Probab=99.55  E-value=2.4e-14  Score=97.42  Aligned_cols=74  Identities=9%  Similarity=0.058  Sum_probs=61.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|..+.||+.||+|++......      .....+.+|+.||++ ++|||||++++.|..++..|+||||++| +|-+
T Consensus       187 ~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkk-L~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd  265 (475)
T KOG0615|consen  187 LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKK-LSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFD  265 (475)
T ss_pred             EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHh-cCCCCEEEEeeeeecCCceEEEEEEecCccHHH
Confidence            5889999999999999999863211      123456799999998 5999999999999999999999999999 7655


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      .+
T Consensus       266 ~v  267 (475)
T KOG0615|consen  266 KV  267 (475)
T ss_pred             HH
Confidence            44

>KOG0582|consensus

Probab=99.53  E-value=6.9e-14  Score=96.01  Aligned_cols=76  Identities=13%  Similarity=0.130  Sum_probs=68.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      -|++|+..++++.||||+++........+.+.+|++.|+. ++||||+.++.+|..+..+|+||.||.+ |+.++++.
T Consensus        41 ~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl-~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~  117 (516)
T KOG0582|consen   41 VVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSL-IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKT  117 (516)
T ss_pred             EeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhh-cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHH
Confidence            4789999999999999999976555558889999999765 6999999999999999999999999999 99999864

>KOG0575|consensus

Probab=99.50  E-value=1.6e-13  Score=96.50  Aligned_cols=77  Identities=14%  Similarity=0.166  Sum_probs=66.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +++.+....+|+.||+|+++..  ......+.+.+|++|... +.|||||+++++|.+.+++||++|+|+. +|..++++
T Consensus        33 ~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~-L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Kr  111 (592)
T KOG0575|consen   33 RCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRS-LKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKR  111 (592)
T ss_pred             EEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHh-cCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHh
Confidence            3566777789999999999863  234457889999999766 6999999999999999999999999999 99999985


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      .
T Consensus       112 r  112 (592)
T KOG0575|consen  112 R  112 (592)
T ss_pred             c
Confidence            3

>KOG0611|consensus

Probab=99.47  E-value=6.8e-14  Score=95.96  Aligned_cols=76  Identities=16%  Similarity=0.196  Sum_probs=67.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ||.+|....+|+.||||.|...  .+..+.-.+.+|++||+. ++|||||++|.+|...+.+.|||||..+ .|.+++..
T Consensus        68 KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSs-LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe  146 (668)
T KOG0611|consen   68 KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSS-LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE  146 (668)
T ss_pred             ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhh-cCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHH
Confidence            7899999999999999999764  344456678999999877 6999999999999999999999999999 99999865

>KOG0610|consensus

Probab=99.43  E-value=5.2e-13  Score=90.95  Aligned_cols=77  Identities=16%  Similarity=0.005  Sum_probs=68.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+||..+.++..+|+|+|+..  .......+++.|-+||+. ++||+++.+|+.|..+...+++||||+| +|..++++
T Consensus        92 ~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~-lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lrqk  170 (459)
T KOG0610|consen   92 TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSL-LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQK  170 (459)
T ss_pred             eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHh-cCCCccchhhheeeccceeEEEEecCCCccHHHHHhh
Confidence            5899999999999999999874  234456778899999987 5999999999999999999999999999 99999876


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      -
T Consensus       171 Q  171 (459)
T KOG0610|consen  171 Q  171 (459)
T ss_pred             C
Confidence            3

>KOG0586|consensus

Probab=99.42  E-value=1.4e-12  Score=91.86  Aligned_cols=78  Identities=19%  Similarity=0.208  Sum_probs=68.6

Q ss_pred             ccceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+|.|+.+..||..||+|.|+.+. +....+.+.+|+++|.. ++||||++++++...+..+|+||||+.+ .+.++|.+
T Consensus        70 ~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~-l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~  148 (596)
T KOG0586|consen   70 AKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKS-LNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK  148 (596)
T ss_pred             EEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHh-cCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHh
Confidence            478999999999999999998753 44456779999999766 6999999999999999999999999999 99888876


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      +
T Consensus       149 ~  149 (596)
T KOG0586|consen  149 H  149 (596)
T ss_pred             c
Confidence            4

>KOG1006|consensus

Probab=99.39  E-value=2.3e-13  Score=88.98  Aligned_cols=76  Identities=45%  Similarity=0.727  Sum_probs=67.8

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      |....|+.+|..+|||+|..+....+..+++.|....++..+.||||+|||+.+.++..||.||+|+-||+.+.+.
T Consensus        80 V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~  155 (361)
T KOG1006|consen   80 VNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISLDKLYKR  155 (361)
T ss_pred             hhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHH
Confidence            3445688999999999999887777788999999988887899999999999999999999999999999988764

>KOG0577|consensus

Probab=99.38  E-value=3.5e-13  Score=95.72  Aligned_cols=75  Identities=12%  Similarity=0.248  Sum_probs=65.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .||.|....+.+.||||.+.-.+  ..+.+++++.|+.+|.+ +.|||+|.|.|||..+...|+|||||-||..+++.
T Consensus        41 AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~-l~HPntieYkgCyLre~TaWLVMEYClGSAsDlle  117 (948)
T KOG0577|consen   41 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQ-LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLE  117 (948)
T ss_pred             eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHh-ccCCCcccccceeeccchHHHHHHHHhccHHHHHH
Confidence            57889999999999999998653  34578999999999998 59999999999999999999999999996666654

>KOG0578|consensus

Probab=99.38  E-value=4.2e-13  Score=93.77  Aligned_cols=75  Identities=17%  Similarity=0.246  Sum_probs=65.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      |++|.-..++..||+|+++..... ..+.++.|+.+|.. .+|+|||.|+++|...+.+|++||||+| +|.+++...
T Consensus       289 vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~-~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~  364 (550)
T KOG0578|consen  289 VYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRD-LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT  364 (550)
T ss_pred             eeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHh-ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc
Confidence            678888889999999999876443 36778999999876 6999999999999999999999999999 999987653

>KOG4717|consensus

Probab=99.38  E-value=1e-12  Score=92.34  Aligned_cols=77  Identities=14%  Similarity=0.137  Sum_probs=67.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .|+||.|..||..||||+|+.+. ++.....+++|+.+|. +.+|||||++|.+.-.+..+|+++|+=++ +|.++|-++
T Consensus        33 VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMK-LVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKH  111 (864)
T KOG4717|consen   33 VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMK-LVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH  111 (864)
T ss_pred             hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHH-HhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhh
Confidence            57899999999999999999864 4445678999999964 57999999999999999999999999999 999998664

>KOG0574|consensus

Probab=99.38  E-value=2.3e-13  Score=90.62  Aligned_cols=72  Identities=17%  Similarity=0.386  Sum_probs=63.6

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |..|.|+.+|..+|+|.++..   .+.+.+..|+.|+++ +..|++|+|||+|+....+|||||||.. |+.++++-
T Consensus        49 V~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQ-C~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~  121 (502)
T KOG0574|consen   49 VHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQ-CKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA  121 (502)
T ss_pred             HHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHH-cCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH
Confidence            445678899999999999753   347889999999988 5999999999999999999999999999 99999874

>KOG0588|consensus

Probab=99.37  E-value=1.1e-12  Score=93.49  Aligned_cols=77  Identities=9%  Similarity=0.079  Sum_probs=64.5

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc--cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT--SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~~~l~   86 (89)
                      +|.+|.|..||+..|||+|...  ..+.....+.+|+.|| +++.||||+++|+++....++|+++||++|  .++.+++
T Consensus        27 ~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviM-kLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~  105 (786)
T KOG0588|consen   27 CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIM-KLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR  105 (786)
T ss_pred             eehhhhcccccceeEEEeeccccccccccccchhhhhHHH-HHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh
Confidence            5889999999999999999864  2333467788999995 567999999999999999999999999999  5566655


Q ss_pred             hc
Q psy13291         87 KV   88 (89)
Q Consensus        87 ~~   88 (89)
                      ++
T Consensus       106 kG  107 (786)
T KOG0588|consen  106 KG  107 (786)
T ss_pred             hC
Confidence            54

>KOG0194|consensus

Probab=99.36  E-value=6.7e-12  Score=87.43  Aligned_cols=64  Identities=19%  Similarity=0.296  Sum_probs=57.6

Q ss_pred             EEEEEEee--cCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         24 EWSFRITF--TVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        24 ~AvK~i~~--~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ||+|....  .........++.|.+++.. ++||||+++||+...+.+++|+||+|+| +|+++|++.
T Consensus       189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~-l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~  255 (474)
T KOG0194|consen  189 VAVKTTKGSSELTKEQIKEFMKEARVMRQ-LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKN  255 (474)
T ss_pred             eEEEeecccccccHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhC
Confidence            89999985  3455678899999999887 6999999999999999999999999999 999999875

>KOG0201|consensus

Probab=99.36  E-value=2.5e-13  Score=92.88  Aligned_cols=77  Identities=13%  Similarity=0.226  Sum_probs=70.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .|+.+....+++.||+|+++......+.+++.+|+.+|.+ +.+|||.++||+|..+..+||+||||.| ++.++++-.
T Consensus        28 ~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~-~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~  105 (467)
T KOG0201|consen   28 EVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQ-CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSG  105 (467)
T ss_pred             eeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHh-cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccC
Confidence            5889999999999999999987666678999999999998 5999999999999999999999999999 999888653

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.36  E-value=1.7e-11  Score=81.57  Aligned_cols=76  Identities=24%  Similarity=0.349  Sum_probs=66.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+...........+.+|+.++.. ++||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        20 ~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   96 (333)
T cd06650          20 VVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK   96 (333)
T ss_pred             EEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH-CCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH
Confidence            4778888889999999999865555556778999999988 4999999999999999999999999999 99998864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.35  E-value=2e-11  Score=81.06  Aligned_cols=76  Identities=22%  Similarity=0.359  Sum_probs=66.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+.........+.+.+|+.+|.. ++||||+++++++...+.++++|||+++ +|.+++..
T Consensus        20 ~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   96 (331)
T cd06649          20 VVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE   96 (331)
T ss_pred             EEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH-CCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH
Confidence            4778888899999999999865555556789999999988 5999999999999999999999999999 99998864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0032|consensus

Probab=99.33  E-value=1.6e-11  Score=83.84  Aligned_cols=76  Identities=14%  Similarity=0.078  Sum_probs=64.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+.|..+.+|..+|+|.++...  .....+.+.+|+++|.++.+||||+.++++|...+.++++||+|+| .|-+.|.
T Consensus        50 ~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~  128 (382)
T KOG0032|consen   50 VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIV  128 (382)
T ss_pred             EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHH
Confidence            57889999999999999998642  2234678999999999975699999999999999999999999998 6655543

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.33  E-value=3.1e-11  Score=79.32  Aligned_cols=76  Identities=26%  Similarity=0.399  Sum_probs=66.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+...........+.+|+.++.++ +||||+++++++..++.++++|||+++ +|.+++++
T Consensus        16 ~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~   92 (308)
T cd06615          16 VVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK   92 (308)
T ss_pred             EEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHh
Confidence            46788888899999999987654555567788999999885 999999999999999999999999999 99999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0984|consensus

Probab=99.33  E-value=4.1e-12  Score=80.82  Aligned_cols=76  Identities=62%  Similarity=0.900  Sum_probs=69.6

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      ++...+..+|..+|+|.+..+.+.....++++|+.+.+....+|++++|||.++.++.+||+||.|+.||+.+.++
T Consensus        62 vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~  137 (282)
T KOG0984|consen   62 VEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRK  137 (282)
T ss_pred             hhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHH
Confidence            5667889999999999999887788889999999998888899999999999999999999999999999988765

>KOG1026|consensus

Probab=99.33  E-value=3.1e-12  Score=92.59  Aligned_cols=67  Identities=12%  Similarity=0.155  Sum_probs=60.8

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ...||||.++...+....++|.+|+++|.. ++|||||+++|++...+.+++++|||.. ||.++|+..
T Consensus       516 ~~lVAVK~LKd~a~~~~~~dF~REaeLla~-l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~  583 (774)
T KOG1026|consen  516 EQLVAVKALKDKAENQARQDFRREAELLAE-LQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRAR  583 (774)
T ss_pred             ceehhHhhhcccccHHHHHHHHHHHHHHHh-ccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhh
Confidence            357999999877777688999999999887 5999999999999999999999999999 999999753

>KOG0196|consensus

Probab=99.33  E-value=5.4e-12  Score=91.53  Aligned_cols=67  Identities=19%  Similarity=0.258  Sum_probs=61.3

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhcC
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKVD   89 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~~   89 (89)
                      ..||||.++.........+|+.|..||-+ ++|||||++-|+......++|+.|||++ +||.+|+.+|
T Consensus       658 ~~VAIKTLK~GytekqrrdFL~EAsIMGQ-FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D  725 (996)
T KOG0196|consen  658 ITVAIKTLKAGYTEKQRRDFLSEASIMGQ-FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND  725 (996)
T ss_pred             eeEEEeeeccCccHHHHhhhhhhhhhccc-CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC
Confidence            46999999876667778899999999988 5999999999999999999999999999 9999999875

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.31  E-value=3.8e-11  Score=79.49  Aligned_cols=76  Identities=12%  Similarity=0.187  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++..+.+|+.+|+|.++... .....+.+..|+.++.. .+||||+++++++..++..|++|||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (327)
T cd08227          15 TVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKL-FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT   92 (327)
T ss_pred             EEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHh
Confidence            46788889999999999997643 23345667789998776 5999999999999999999999999999 99998854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.31  E-value=3.3e-11  Score=81.50  Aligned_cols=76  Identities=11%  Similarity=0.119  Sum_probs=65.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....++..+|+|++...  ......+.+..|+.++.. .+||||+++++++..++.+|++||||+| +|.+++.+
T Consensus        16 ~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~   94 (381)
T cd05626          16 EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR   94 (381)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh
Confidence            4788889999999999999753  223445678899999887 5999999999999999999999999999 99988864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0192|consensus

Probab=99.31  E-value=2.3e-11  Score=82.67  Aligned_cols=72  Identities=21%  Similarity=0.181  Sum_probs=60.6

Q ss_pred             EEEccCCCE-EEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291         15 GLARLDPDS-EWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        15 ~~~~~~~~~-~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ....+.|.. +|+|.+... .++...+.+.+|+.+|.+ ++|||||+|+|++..+. .+.||||||++ +|.+++.+
T Consensus        58 ~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~-l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~  133 (362)
T KOG0192|consen   58 YKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSR-LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHK  133 (362)
T ss_pred             EEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhh
Confidence            345667887 999999753 233337789999999988 59999999999999987 89999999999 99999965

>KOG0600|consensus

Probab=99.30  E-value=1.4e-11  Score=85.73  Aligned_cols=76  Identities=12%  Similarity=0.143  Sum_probs=65.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+.|....+|..||+|.+.... .+.......+|+.||.+ ++|||||++.+.....  ..+|+|+|||+.+|..++..
T Consensus       132 ~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~-l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~  210 (560)
T KOG0600|consen  132 QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR-LDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSS  210 (560)
T ss_pred             heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh-cCCCcccceeeEEEecCCceEEEEEecccchhhhhhcC
Confidence            48899999999999999998654 44567788899999988 5999999999998886  68999999999988877643

>KOG0583|consensus

Probab=99.30  E-value=2e-11  Score=83.15  Aligned_cols=77  Identities=16%  Similarity=0.176  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec-C---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-V---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      +|+++.+..+|..+|+|+++.. .   .....+.+.+|+.++..+..||||++++.++...+.+|++||||.| +|.+++
T Consensus        32 kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i  111 (370)
T KOG0583|consen   32 KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYI  111 (370)
T ss_pred             eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHH
Confidence            6899999999999999977653 1   1123456678999988864599999999999999999999999999 888887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       112 ~~  113 (370)
T KOG0583|consen  112 VN  113 (370)
T ss_pred             HH
Confidence            65

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=3.2e-11  Score=81.28  Aligned_cols=76  Identities=13%  Similarity=0.107  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|+.+|+|.+....  .....+.+..|+.++.. .+||||+++++++..++.+|++|||++| +|.+++..
T Consensus        16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~   94 (377)
T cd05629          16 EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK   94 (377)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh
Confidence            57888888999999999996531  22345678889999887 5999999999999999999999999999 99888754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=3.4e-11  Score=80.61  Aligned_cols=76  Identities=13%  Similarity=0.136  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++....  .......+.+|+.+|.. .+||||+++++++..++.+|++||||++ +|.+++..
T Consensus        16 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~   94 (364)
T cd05599          16 EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK   94 (364)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH
Confidence            57888888999999999997531  22345667889999887 5999999999999999999999999999 99988764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0587|consensus

Probab=99.29  E-value=2.1e-11  Score=88.99  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=65.2

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-----CCEEEEEecchhc-cHHH
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-----EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~-sL~~   83 (89)
                      .||+.+.++.+|+..|+|+++...+.  .+.+..|..+|+...+|||++.+||+|..     ++.+|+|||||.| |+.+
T Consensus        33 gkv~k~k~~~~~~~aa~kI~~~~~d~--deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTD  110 (953)
T KOG0587|consen   33 GKVYKGRHVKTGQLAAIKIMDPTEDE--EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTD  110 (953)
T ss_pred             eeEEEEeeeecCceeeeEeecCCccc--cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHH
Confidence            57899999999999999999765433  44555688888887899999999999976     4799999999999 9999


Q ss_pred             HHhhc
Q psy13291         84 FYTKV   88 (89)
Q Consensus        84 ~l~~~   88 (89)
                      +++..
T Consensus       111 LVKn~  115 (953)
T KOG0587|consen  111 LVKNT  115 (953)
T ss_pred             HHhhh
Confidence            98764

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.28  E-value=4.2e-11  Score=80.63  Aligned_cols=76  Identities=9%  Similarity=0.061  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+|+|.+....  .....+.+.+|+.+|.. ++||||+++++.+..++.+|++||||++ +|.+++.+
T Consensus        16 ~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~   94 (376)
T cd05598          16 EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR   94 (376)
T ss_pred             EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence            47888888999999999996421  22335667889999888 5999999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.28  E-value=5.8e-11  Score=78.88  Aligned_cols=77  Identities=12%  Similarity=0.056  Sum_probs=64.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|++....  .......+..|..++....+||||+++++++...+.+|++||||++ +|.+++.+
T Consensus        10 ~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~   89 (329)
T cd05588          10 KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR   89 (329)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH
Confidence            57888888999999999998532  2234566788999988866899999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.28  E-value=4.6e-11  Score=79.34  Aligned_cols=76  Identities=11%  Similarity=0.059  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|.+....  .....+.+.+|+.+|.. ++||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        33 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  111 (329)
T PTZ00263         33 RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILME-LSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK  111 (329)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH
Confidence            57888888999999999997531  22345678899999888 5999999999999999999999999999 99888764

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.27  E-value=6.2e-11  Score=80.03  Aligned_cols=76  Identities=9%  Similarity=0.068  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....++..+|+|.+....  .....+.+..|+.++.. .+||||+++++++...+.+|++||||++ +|.+++.+
T Consensus        16 ~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~-~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~   94 (382)
T cd05625          16 EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR   94 (382)
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence            47888888999999999997531  22345678899999888 5999999999999999999999999999 99988764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=6.2e-11  Score=78.61  Aligned_cols=76  Identities=14%  Similarity=0.164  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|++....  .......+..|+.++.. .+||||+++++++...+.+|++|||++| +|.+++..
T Consensus        16 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~   94 (333)
T cd05600          16 QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN   94 (333)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHh-CCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH
Confidence            47788888899999999997532  22345678889999887 4899999999999999999999999999 99999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.27  E-value=5.9e-11  Score=75.46  Aligned_cols=76  Identities=16%  Similarity=0.178  Sum_probs=65.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+...........+.+|+.++.. ++||||+++++.+...+..|++|||+++ +|.+++..
T Consensus        10 ~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   86 (252)
T cd05084          10 EVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ-YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT   86 (252)
T ss_pred             cEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHh
Confidence            4778888889999999988755555556778999999887 5999999999999999999999999999 99998854

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.27  E-value=4.6e-11  Score=81.77  Aligned_cols=67  Identities=19%  Similarity=0.215  Sum_probs=57.2

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +..+|+|.+.........+.+.+|+.+|..+..||||+++++++...+.+||+||||++ +|.+++.+
T Consensus        67 ~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105          67 VMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             ceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHH
Confidence            34699999976555555678999999998864599999999999999999999999999 99998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0605|consensus

Probab=99.27  E-value=2.9e-11  Score=84.45  Aligned_cols=76  Identities=11%  Similarity=0.126  Sum_probs=67.2

Q ss_pred             ceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         12 PELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      |+||.-+.||.++|+|++...  ....+...+..|-.+|.. ..+|.||++|-+|++.+++|++|||++| ++..+|.+-
T Consensus       157 VrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~  235 (550)
T KOG0605|consen  157 VRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRK  235 (550)
T ss_pred             EEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhc
Confidence            789999999999999999864  233457788999999988 6999999999999999999999999999 999988653

>KOG1094|consensus

Probab=99.26  E-value=1.3e-11  Score=87.56  Aligned_cols=67  Identities=15%  Similarity=0.256  Sum_probs=61.5

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      +..||+|.+..........+|..|+.+|.++ .||||++++|+|..++.+++++|||++ +|.+++.++
T Consensus       562 ~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ah  629 (807)
T KOG1094|consen  562 PLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAH  629 (807)
T ss_pred             ceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhc
Confidence            5889999998776666788999999999995 999999999999999999999999999 999999775

>KOG0616|consensus

Probab=99.26  E-value=2.5e-11  Score=80.26  Aligned_cols=77  Identities=12%  Similarity=0.140  Sum_probs=68.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|-|+.++.+|..+|+|+++..  ......+...+|..+|... .||+++.+++++.+.+.+|++|||.+| .|-+++++
T Consensus        59 rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk  137 (355)
T KOG0616|consen   59 RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK  137 (355)
T ss_pred             eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh
Confidence            6889999999999999999864  2334567788999999885 899999999999999999999999999 99999987


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      .
T Consensus       138 ~  138 (355)
T KOG0616|consen  138 S  138 (355)
T ss_pred             c
Confidence            5

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.26  E-value=7.5e-11  Score=79.23  Aligned_cols=76  Identities=11%  Similarity=0.104  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++....  .......+..|+.++.. .+||||+++++++...+.+|++||||+| +|.+++.+
T Consensus        16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~   94 (363)
T cd05628          16 EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK   94 (363)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence            47888889999999999997531  22335667889999887 5999999999999999999999999999 99988864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.26  E-value=9.1e-11  Score=77.69  Aligned_cols=76  Identities=12%  Similarity=-0.005  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+|+|++....  .......+..|+.++.. .+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        10 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   88 (323)
T cd05571          10 KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR   88 (323)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence            57888999999999999997532  23345677889999887 5999999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.26  E-value=9.7e-11  Score=75.50  Aligned_cols=77  Identities=62%  Similarity=0.876  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+...........+..|+.++.+..+|||++++++++..++.+|++|||++++|.++++.
T Consensus        16 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~   92 (283)
T cd06617          16 VVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKK   92 (283)
T ss_pred             EEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHH
Confidence            46788888899999999998654333345667787776666799999999999999999999999999888777753

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.25  E-value=1.2e-10  Score=77.51  Aligned_cols=77  Identities=10%  Similarity=0.049  Sum_probs=64.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+++.+|+|.+...  ........+..|+.++....+||||+++++++...+.+|++|||+++ +|..++..
T Consensus        10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~   89 (329)
T cd05618          10 KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR   89 (329)
T ss_pred             EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH
Confidence            5788888999999999999753  22334566788998888766999999999999999999999999999 99877654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0597|consensus

Probab=99.25  E-value=1e-11  Score=87.90  Aligned_cols=78  Identities=14%  Similarity=0.088  Sum_probs=68.9

Q ss_pred             cccceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291          9 KKKPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus         9 ~~~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      +..||.+..+.+.+.||+|.++... ...+...+.+|++|+.. +.||||+.+++.|....++|+|+|||.|+|..+|..
T Consensus        15 fg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~-lkHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~   93 (808)
T KOG0597|consen   15 FGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRS-LKHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQ   93 (808)
T ss_pred             cceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHh-cCCcchhhHHHhhcccceEEEEehhhhhhHHHHHHh
Confidence            5678999999999999999998754 34467889999999877 599999999999999999999999999988888764

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.25  E-value=7.3e-11  Score=76.83  Aligned_cols=76  Identities=12%  Similarity=0.135  Sum_probs=62.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...........+.+|+.++.. ++||||+++++++..++..+++|||++++|.+++..
T Consensus        20 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~   95 (288)
T cd07871          20 TVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN-LKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDN   95 (288)
T ss_pred             EEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHh-CCCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHh
Confidence            4788888889999999999754333334567789999887 599999999999999999999999999977776643

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.25  E-value=9.3e-11  Score=77.51  Aligned_cols=77  Identities=10%  Similarity=0.024  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|++....  .....+.+..|..++....+||||+++++++..++.+|++|||+++ +|..++..
T Consensus        10 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~   89 (321)
T cd05591          10 KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR   89 (321)
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH
Confidence            57888888899999999997531  2234566778999987766999999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=1e-10  Score=77.02  Aligned_cols=76  Identities=12%  Similarity=0.089  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...  ........+..|+.+|.. .+||||+++++++..++..|++|||+++ +|.+++..
T Consensus         8 ~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   86 (312)
T cd05585           8 KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQ-VNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR   86 (312)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence            4788888889999999999753  123345677889999888 5999999999999999999999999999 99888754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.24  E-value=1.6e-10  Score=74.82  Aligned_cols=76  Identities=26%  Similarity=0.398  Sum_probs=65.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+...........+.+|++++.. .+||||+++++++..++.+++++||+++ +|++++.+
T Consensus        20 ~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   96 (284)
T cd06620          20 SVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHE-CRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK   96 (284)
T ss_pred             EEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHH-cCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh
Confidence            4677888888999999998765444456778899999887 5999999999999999999999999999 99988765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.24  E-value=7.7e-11  Score=78.02  Aligned_cols=77  Identities=14%  Similarity=0.086  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+++.+|+|.+....  .....+.+..|..++....+||||+++++++...+.+|++|||+++ +|.+++.+
T Consensus        10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~   89 (320)
T cd05590          10 KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK   89 (320)
T ss_pred             EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH
Confidence            47888888999999999997531  2234566778888887766899999999999999999999999999 99888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.24  E-value=1.1e-10  Score=77.46  Aligned_cols=76  Identities=12%  Similarity=-0.014  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+....  .......+..|+.++.. .+||||+++++++...+.+|++|||+++ +|..++..
T Consensus        10 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~   88 (323)
T cd05595          10 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR   88 (323)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH
Confidence            47888888999999999997532  22345667789999887 5999999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0198|consensus

Probab=99.24  E-value=5.9e-11  Score=79.23  Aligned_cols=78  Identities=17%  Similarity=0.158  Sum_probs=65.3

Q ss_pred             cccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHHH
Q psy13291          9 KKKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKFY   85 (89)
Q Consensus         9 ~~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~l   85 (89)
                      .-.|+++.+..+|+.+|+|.+...... ..+.+.+|+.+|..+ .|||||+++|.....+  .++|+|||+++ ||.+++
T Consensus        30 ~G~V~l~~~~~~g~~~AvK~v~~~~~~-~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~  107 (313)
T KOG0198|consen   30 FGSVYLATNKKTGELMAVKSVELEDSP-TSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLI  107 (313)
T ss_pred             ceEEEEEEecCCCcceeeeeeecccch-hHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHH
Confidence            346889999899999999999876333 377799999999996 6999999999855443  79999999999 999998


Q ss_pred             hhc
Q psy13291         86 TKV   88 (89)
Q Consensus        86 ~~~   88 (89)
                      ++.
T Consensus       108 ~~~  110 (313)
T KOG0198|consen  108 KRY  110 (313)
T ss_pred             HHc
Confidence            764

>KOG0591|consensus

Probab=99.24  E-value=1.2e-12  Score=86.14  Aligned_cols=76  Identities=16%  Similarity=0.283  Sum_probs=65.9

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEe-EEEECCE-EEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYG-AMFREGD-VWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~-~~~~~~~-~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+.+.+.++|..+|.|.|.-. .+....+++..|+.+|.+ ++|||||++|+ .|..++. ++|+||||++ +|.++|+
T Consensus        34 ~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQ-L~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk  112 (375)
T KOG0591|consen   34 EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQ-LNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIK  112 (375)
T ss_pred             heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHh-cCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHH
Confidence            3677888999999999999743 456678899999999999 59999999998 7777665 9999999999 9999997


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       113 ~  113 (375)
T KOG0591|consen  113 H  113 (375)
T ss_pred             H
Confidence            5

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.24  E-value=8.3e-11  Score=80.59  Aligned_cols=69  Identities=17%  Similarity=0.222  Sum_probs=57.9

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ++..+|+|.+.........+.+..|+.+|..+..||||+++++++..++.++++||||++ +|.+++.+.
T Consensus        66 ~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107          66 STMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             CceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhc
Confidence            456799999976544444567889999998864599999999999999999999999999 999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.24  E-value=2.4e-10  Score=73.78  Aligned_cols=76  Identities=14%  Similarity=0.252  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+...........+.+|+.++.. .+||||+++++++...+..|++|||+++ +|.++++.
T Consensus        19 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~   95 (277)
T cd06640          19 EVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA   95 (277)
T ss_pred             EEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc
Confidence            4677777888999999999865444556788899999887 5999999999999999999999999999 99988764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.23  E-value=5.7e-11  Score=76.87  Aligned_cols=76  Identities=33%  Similarity=0.517  Sum_probs=65.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+....++.....+.+|+.++.. ..||||+++++++..++..|++|||+++ +|++++..
T Consensus        16 ~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (286)
T cd06622          16 SVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHK-AVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAG   92 (286)
T ss_pred             EEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHh-cCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHh
Confidence            4677888889999999999765555556788899999888 5999999999999999999999999999 99998865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.23  E-value=1.3e-10  Score=76.96  Aligned_cols=77  Identities=9%  Similarity=0.025  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+....  .....+....|..++....+||||+++++++...+.+|++|||+++ +|.++++.
T Consensus        10 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~   89 (316)
T cd05619          10 KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS   89 (316)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence            57889888999999999997532  1223456677888887766999999999999999999999999999 99988864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG1989|consensus

Probab=99.23  E-value=7.1e-11  Score=85.60  Aligned_cols=74  Identities=16%  Similarity=0.124  Sum_probs=62.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeE-EEEC------CEEEEEecchhc-cHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGA-MFRE------GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~-~~~~------~~~~iv~E~~~~-sL~~   83 (89)
                      ||+|.....|..+|+|++-.. +....+.+.+|+.+|..+.+|+|||.|+++ ....      -+++|+||||.| +|-+
T Consensus        53 VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd  131 (738)
T KOG1989|consen   53 VYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVD  131 (738)
T ss_pred             EEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHH
Confidence            688888888899999999865 667788999999999998899999999993 3221      279999999998 8888


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      ++.
T Consensus       132 ~mn  134 (738)
T KOG1989|consen  132 FMN  134 (738)
T ss_pred             HHH
Confidence            775

>KOG0659|consensus

Probab=99.22  E-value=2.5e-11  Score=79.25  Aligned_cols=77  Identities=8%  Similarity=0.070  Sum_probs=65.9

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~   88 (89)
                      -|++|....||+.||||.|... ..+....+.++|+..|+. ++||||+.+.++|-+.+.+.||+|||+.+|+.+|+..
T Consensus        17 vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqe-l~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~   94 (318)
T KOG0659|consen   17 VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQE-LKHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDK   94 (318)
T ss_pred             EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHH-ccCcchhhhhhhccCCCceEEEEEeccccHHHHhccc
Confidence            4788999999999999999753 233335578899999988 5999999999999999999999999999999988753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.22  E-value=6.7e-11  Score=80.02  Aligned_cols=69  Identities=14%  Similarity=0.120  Sum_probs=58.4

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++..+|+|++.........+.+.+|+.+|..+.+||||+++++++...+..+++||||++ +|.++++.
T Consensus        63 ~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104          63 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             ccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHh
Confidence            4567899999975444445677889999998855899999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.22  E-value=3e-10  Score=73.39  Aligned_cols=76  Identities=14%  Similarity=0.265  Sum_probs=63.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...........+.+|+.++.. .+||||+++++.+...+..|++|||+++ +|.+++..
T Consensus        19 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~   95 (277)
T cd06641          19 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP   95 (277)
T ss_pred             EEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHh-cCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc
Confidence            3667777788999999998754444456678889999887 5999999999999999999999999999 99988764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.22  E-value=1.5e-10  Score=76.47  Aligned_cols=77  Identities=8%  Similarity=0.037  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....++..+|+|.+....  .....+....|..++....+||||+++++++...+.+|++|||++| +|.++++.
T Consensus        10 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~   89 (316)
T cd05592          10 KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS   89 (316)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH
Confidence            57888888999999999997532  2233455667777777666999999999999999999999999999 99888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.22  E-value=1.6e-10  Score=78.12  Aligned_cols=76  Identities=13%  Similarity=0.112  Sum_probs=63.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+...  ......+.+..|+.++.. .+||||+++++++..++.+|++||||+| +|.+++..
T Consensus        58 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~-~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~  136 (370)
T cd05596          58 EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN  136 (370)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh
Confidence            5788888899999999999752  122234557789999877 5999999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.22  E-value=1.5e-10  Score=76.52  Aligned_cols=77  Identities=9%  Similarity=0.042  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...  ........+..|..++....+||||+++++++...+.+|++|||++| +|...+..
T Consensus        10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   89 (318)
T cd05570          10 KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR   89 (318)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH
Confidence            5788888899999999999753  12234566778989987766899999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0607|consensus

Probab=99.22  E-value=3.4e-12  Score=85.44  Aligned_cols=71  Identities=8%  Similarity=0.059  Sum_probs=60.5

Q ss_pred             EEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         15 GLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        15 ~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      |.+..||..||||+|+..... ...++++|++++.+..+|+||+++.+.|.+++..|+|||=|.| +|-.-|+
T Consensus        97 cv~i~t~~EYAVKiidKq~gH-sR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~  168 (463)
T KOG0607|consen   97 CVSIQTGKEYAVKIIDKQPGH-SRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQ  168 (463)
T ss_pred             eeeeccchhhhhhhhhcCCch-HHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHH
Confidence            445578999999999877443 4778999999999989999999999999999999999999999 6655444

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.21  E-value=2.2e-10  Score=77.53  Aligned_cols=76  Identities=13%  Similarity=0.140  Sum_probs=63.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..++..+|+|.+...  ......+.+..|+.++.. .+||||+++++++..++.+|++||||++ +|.+++..
T Consensus        58 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~  136 (370)
T cd05621          58 EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN  136 (370)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh
Confidence            4778888899999999999742  122234557788888776 6999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.21  E-value=1.9e-10  Score=76.40  Aligned_cols=76  Identities=12%  Similarity=0.010  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|++....  .......+.+|+.++.. .+||||+++++++...+.+|++|||+++ +|...+..
T Consensus        10 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~   88 (328)
T cd05593          10 KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR   88 (328)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh
Confidence            57888899999999999997532  23345678889999877 5999999999999999999999999999 99877754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0589|consensus

Probab=99.21  E-value=4.8e-11  Score=82.16  Aligned_cols=75  Identities=15%  Similarity=0.215  Sum_probs=64.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE-EEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD-VWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~-~~iv~E~~~~-sL~~~l~~   87 (89)
                      +.++.++..+..+++|.|.... .....+...+|+.++++ +.|||||.+.+.|...+. ++|+|+||+| ++.+.|.+
T Consensus        20 a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~-~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~   97 (426)
T KOG0589|consen   20 ALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK-LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKE   97 (426)
T ss_pred             hhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh-ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHH
Confidence            4567788888899999998753 44456678899999998 699999999999999887 9999999999 99999865

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.21  E-value=1.2e-10  Score=78.87  Aligned_cols=76  Identities=20%  Similarity=0.128  Sum_probs=61.4

Q ss_pred             ceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+.+....     ++..||+|.+.........+.+.+|+.++..+.+||||+++++++...+.++++||||++ +|.+++
T Consensus        54 V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l  133 (374)
T cd05106          54 VVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFL  133 (374)
T ss_pred             EEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHH
Confidence            45555433     335799999976554555677889999988755899999999999999999999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      +.
T Consensus       134 ~~  135 (374)
T cd05106         134 RK  135 (374)
T ss_pred             Hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.21  E-value=2.1e-10  Score=76.96  Aligned_cols=76  Identities=12%  Similarity=0.146  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+...  ........+..|..++.. .+||||+++++++...+.+|++||||+| +|.+++.+
T Consensus        16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~   94 (360)
T cd05627          16 EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVE-ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK   94 (360)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh
Confidence            4788888899999999999753  122345678889999887 5999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.20  E-value=2.9e-10  Score=75.46  Aligned_cols=77  Identities=9%  Similarity=0.062  Sum_probs=65.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|++....  .....+.+..|..++....+||||+.+++++...+.+|++|||+++ +|..++..
T Consensus        10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   89 (327)
T cd05617          10 KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR   89 (327)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence            57888888999999999998542  2334567888999988876899999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.20  E-value=1.8e-10  Score=75.43  Aligned_cols=75  Identities=9%  Similarity=0.056  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|....+|..+|+|.+...........+.+|+.++.. ++||||+++++++..++..+++|||++++|.+++.
T Consensus        20 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~   94 (303)
T cd07869          20 TVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKG-LKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMD   94 (303)
T ss_pred             EEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhh-CCCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHH
Confidence            5778888889999999999754333334456789999887 59999999999999999999999999886555554

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=6.5e-11  Score=77.25  Aligned_cols=76  Identities=7%  Similarity=0.085  Sum_probs=63.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|.+....  .....+.+.+|+.++.. +.||||+++++++...+.+|++|||+++ +|.++++.
T Consensus        16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   94 (291)
T cd05612          16 RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE-VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN   94 (291)
T ss_pred             EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHh-CCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH
Confidence            57888888899999999997532  22345668889999887 5999999999999999999999999999 99988764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.20  E-value=8e-11  Score=78.09  Aligned_cols=69  Identities=19%  Similarity=0.282  Sum_probs=56.7

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++..||+|.+...........+..|+.+|..+.+||||+++++++... +.++++|||+++ +|.++++.
T Consensus        35 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          35 SSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             ccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHh
Confidence            3557899999975444445677899999998865999999999988764 468999999999 99999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.20  E-value=2.7e-10  Score=75.46  Aligned_cols=76  Identities=13%  Similarity=-0.009  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+....  .......+..|+.++.. .+||||+++++++..++.+|++|||+++ +|..++..
T Consensus        10 ~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~-~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~   88 (325)
T cd05594          10 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR   88 (325)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence            57888888999999999997532  22345667789999877 5999999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.20  E-value=1.5e-10  Score=77.46  Aligned_cols=72  Identities=14%  Similarity=0.098  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      .|+++....+|..||+|.+...........+.+|+.++.. ++||||+++++.+...+.++++|||+++ +|..
T Consensus        89 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  161 (353)
T PLN00034         89 TVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD-VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG  161 (353)
T ss_pred             EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHh-CCCCCcceeeeEeccCCeEEEEEecCCCCcccc
Confidence            5778888889999999999765555556778999999887 5999999999999999999999999999 8754

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.20  E-value=2.5e-10  Score=75.55  Aligned_cols=77  Identities=9%  Similarity=0.116  Sum_probs=61.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|+.+|+|++....  .......+..|...+.+..+||||+++++.+...+.+|++|||+++ +|..++..
T Consensus        10 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   89 (323)
T cd05575          10 KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR   89 (323)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh
Confidence            57888999999999999997531  2233455667766555546999999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.20  E-value=2.1e-10  Score=73.77  Aligned_cols=68  Identities=18%  Similarity=0.203  Sum_probs=58.1

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+..+|+|.+....+......+..|+..+.. ..||||+++++.+...+.++++|||+++ +|++++..
T Consensus        31 ~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   99 (266)
T cd05064          31 KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQ-FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRK   99 (266)
T ss_pred             CceeeEEEEecCCCCCHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHh
Confidence            35678999999865555556778899999887 5999999999999999999999999999 99998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG1095|consensus

Probab=99.19  E-value=1.1e-10  Score=87.01  Aligned_cols=65  Identities=18%  Similarity=0.197  Sum_probs=59.6

Q ss_pred             EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         23 SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        23 ~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .||+|.+....+..+..+|+.|..+|.. ++||||+++.|.+......+|++|||.| +|..+|+..
T Consensus       724 ~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~-f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~  789 (1025)
T KOG1095|consen  724 QVAVKSLKRLSSEQEVSDFLKEALLMSK-FDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRES  789 (1025)
T ss_pred             EEEEEeccccCCHHHHHHHHHHHHHHhc-CCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhc
Confidence            4999999887777888999999999877 6999999999999999999999999999 999999875

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.19  E-value=4.6e-10  Score=72.65  Aligned_cols=74  Identities=27%  Similarity=0.422  Sum_probs=63.2

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      -.|+++.+..++..+|+|.+.........+.+.+|+.++.. ++||||+++++.+...+..+++|||+++ +|+.+
T Consensus        15 ~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (279)
T cd06619          15 GTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYK-CDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY   89 (279)
T ss_pred             eEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHh-CCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh
Confidence            35788888899999999999765444456678899999887 5999999999999999999999999999 88654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0197|consensus

Probab=99.19  E-value=1.2e-10  Score=80.87  Aligned_cols=67  Identities=16%  Similarity=0.220  Sum_probs=56.2

Q ss_pred             ccCCC-EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         18 RLDPD-SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        18 ~~~~~-~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ...|. .+|+|.+....  ...+.+.+|+++|++ ++|+|||+++|++..++.++||||||+. +|.++|+.
T Consensus       226 ~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~-L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~  294 (468)
T KOG0197|consen  226 KWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKK-LRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRT  294 (468)
T ss_pred             EEcCCCcccceEEeccc--cChhHHHHHHHHHHh-CcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhh
Confidence            34554 78999997532  224677899999888 5999999999999999999999999999 99999986

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.19  E-value=2.3e-10  Score=74.81  Aligned_cols=67  Identities=16%  Similarity=0.251  Sum_probs=57.1

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+..........++.+|+.+|.. +.||||+++++++...+..+++|||+++ +|.+++..
T Consensus        45 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (304)
T cd05096          45 RPLLVAVKILRPDANKNARNDFLKEVKILSR-LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSS  112 (304)
T ss_pred             cceEEEEEEecCCCCHHHHHHHHHHHHHHhh-cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            4457999999765555556788999999887 5999999999999999999999999999 99988754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=5.6e-10  Score=72.01  Aligned_cols=75  Identities=21%  Similarity=0.295  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+... .....+.+..|+.++..+ +|||++++++.+..++..|++|||+++ +|++++..
T Consensus        20 ~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (280)
T cd06611          20 KVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE   95 (280)
T ss_pred             eEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHH
Confidence            4677777788999999999754 334467788999998884 899999999999999999999999999 99998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.19  E-value=2.6e-10  Score=72.79  Aligned_cols=76  Identities=34%  Similarity=0.496  Sum_probs=66.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+++.+|+|.+...........+.+|+.++..+ .||||+++++.+...+.+++++||+++ +|.+++..
T Consensus        16 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (265)
T cd06605          16 VVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKE   92 (265)
T ss_pred             EEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHH
Confidence            46788888899999999998765555567789999998884 799999999999999999999999998 99999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=4.3e-10  Score=72.38  Aligned_cols=77  Identities=12%  Similarity=0.183  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC--CCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS--DCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~--~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+...........+.+|+.++..+.  .|||++++++++...+.+|++|||+++ +|.++++.
T Consensus        16 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (277)
T cd06917          16 AVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA   95 (277)
T ss_pred             eEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc
Confidence            467777788999999999976544455677888999988753  499999999999999999999999999 99998764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.18  E-value=2.1e-10  Score=75.18  Aligned_cols=76  Identities=8%  Similarity=0.135  Sum_probs=65.5

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      -+.++.+..+|..+|+|.+... ........+..|+.++.. ++||||+++++++...+.++++|||+++ +|++++..
T Consensus        15 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~   92 (314)
T cd08216          15 IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQ-LQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT   92 (314)
T ss_pred             eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHh-cCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHH
Confidence            3677888889999999999764 344556789999999887 5899999999999999999999999999 99998864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PHA02988 hypothetical protein; Provisional

Probab=99.18  E-value=3.3e-10  Score=73.86  Aligned_cols=70  Identities=10%  Similarity=0.048  Sum_probs=56.7

Q ss_pred             EccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHHhh
Q psy13291         17 ARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        17 ~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ...+|..+|+|.+....  .....+.+.+|+.+|.+ +.||||++++|++..    ...++++|||+++ +|.+++..
T Consensus        39 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  115 (283)
T PHA02988         39 GIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRR-IDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK  115 (283)
T ss_pred             EEECCEEEEEEeccccccccHHHHHHHHHHHHHHHh-cCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh
Confidence            34588999999997542  22235678899999988 599999999999877    3579999999999 99999865

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.18  E-value=2.4e-10  Score=75.56  Aligned_cols=77  Identities=9%  Similarity=0.041  Sum_probs=63.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+....  .....+....|..++....+||||+++++++...+.+|++|||+++ +|..++..
T Consensus        10 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~   89 (316)
T cd05620          10 KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD   89 (316)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH
Confidence            57889999999999999997532  1223556677888887666999999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.18  E-value=1.3e-10  Score=75.01  Aligned_cols=76  Identities=14%  Similarity=0.261  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.+....++..+|+|.+.........+.+.+|+.++.. .+||||+++++.+..++..|+++||+++ +|.+++..
T Consensus        19 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (277)
T cd06642          19 EVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP   95 (277)
T ss_pred             eEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHc-CCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc
Confidence            4677888888999999998755444456778899999887 5999999999999999999999999999 99888754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.18  E-value=3.9e-10  Score=74.67  Aligned_cols=76  Identities=8%  Similarity=0.002  Sum_probs=64.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|+.||+|.+.... .....+.+.+|+.++.. ++||||++++++|..++..|+++||+.+ ++.+++++
T Consensus        15 ~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~-l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~   92 (328)
T cd08226          15 SVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHF-FRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKT   92 (328)
T ss_pred             eEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHh
Confidence            47788888899999999997543 34445778888888765 5999999999999999999999999999 99998865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.18  E-value=3.2e-10  Score=73.57  Aligned_cols=75  Identities=11%  Similarity=0.033  Sum_probs=62.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+|+.+|+|.+.....  ....+.+..|+.++.. ++||||+.+.+++...+.++++|||+++ +|.+++.
T Consensus         8 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~   85 (280)
T cd05608           8 EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAK-VHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIY   85 (280)
T ss_pred             eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHh-CCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHH
Confidence            578889999999999999975321  1234567789999887 5999999999999999999999999999 9987763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.18  E-value=3.4e-10  Score=73.97  Aligned_cols=76  Identities=12%  Similarity=0.145  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...........+..|+.++.. ++||||+++++++..++.++++|||++++|.+++..
T Consensus        21 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~   96 (301)
T cd07873          21 TVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD   96 (301)
T ss_pred             EEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHh-cCCCCcceEEEEEecCCeEEEEEeccccCHHHHHHh
Confidence            4678888889999999999754333334557789999887 599999999999999999999999998877766643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=3.3e-10  Score=75.30  Aligned_cols=76  Identities=11%  Similarity=0.046  Sum_probs=63.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...  ......+.+..|..++.. .+||||+.+++++..++.+|++|||++| +|.+++.+
T Consensus        16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~   94 (331)
T cd05597          16 EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHH
Confidence            4678888899999999999742  222345567788888776 5999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.17  E-value=4.1e-10  Score=76.15  Aligned_cols=76  Identities=13%  Similarity=0.126  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..++..+|+|.+...  ......+.+..|..++.. .+||||+++++++..++.+|++||||+| +|.++++.
T Consensus        58 ~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~-~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~  136 (371)
T cd05622          58 EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN  136 (371)
T ss_pred             EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh
Confidence            5788888999999999999742  122234556788888766 6999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.17  E-value=4.5e-10  Score=74.35  Aligned_cols=77  Identities=12%  Similarity=0.177  Sum_probs=61.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|++....  .......+..|...+.+..+||||+++++++...+..|++|||+++ +|..++.+
T Consensus        10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   89 (325)
T cd05604          10 KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR   89 (325)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH
Confidence            57888888999999999997531  2233455666766555556999999999999999999999999999 98877654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG1187|consensus

Probab=99.17  E-value=2.2e-10  Score=77.83  Aligned_cols=66  Identities=18%  Similarity=0.256  Sum_probs=54.8

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|..+|||.+....... ..+|..|+.+|.++ +|||+++++|+|...+ ...+|.|||++ ||++.|..
T Consensus        98 ~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~  165 (361)
T KOG1187|consen   98 DGTVVAVKRLSSNSGQG-EREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHG  165 (361)
T ss_pred             CCCEEEEEEecCCCCcc-hhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCC
Confidence            44889999887544332 44599999999985 8999999999999988 59999999999 99988753

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.17  E-value=3.8e-10  Score=74.74  Aligned_cols=77  Identities=13%  Similarity=0.059  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+....  .....+.+..|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++++
T Consensus        16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   94 (330)
T cd05601          16 EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI-SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNR   94 (330)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHH
Confidence            57888888999999999997532  22345567788888776 5999999999999999999999999999 99999875


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      .
T Consensus        95 ~   95 (330)
T cd05601          95 Y   95 (330)
T ss_pred             h
Confidence            3

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0598|consensus

Probab=99.16  E-value=1.1e-10  Score=78.37  Aligned_cols=76  Identities=9%  Similarity=0.031  Sum_probs=66.5

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ||.++..+.+++.+|+|++...  ....+.+....|..||.. .+||+|+.++-+|++.+.+|+|+||+.| .|-..|++
T Consensus        40 kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~-v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~  118 (357)
T KOG0598|consen   40 KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK-IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR  118 (357)
T ss_pred             eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh-CCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHh
Confidence            6889999999999999999864  233457788999999988 6999999999999999999999999999 88777764

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.16  E-value=6.3e-10  Score=72.25  Aligned_cols=75  Identities=25%  Similarity=0.276  Sum_probs=62.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .++++....+++.+|+|.+...........+.+|++++.. ++||||+.+++++...  +.++++|||+++ +|.+++.
T Consensus        16 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   93 (287)
T cd06621          16 SVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKS-CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYK   93 (287)
T ss_pred             EEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHh-CCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHH
Confidence            4678888889999999999865444456778999999887 5999999999998654  479999999999 9988765

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.16  E-value=9.4e-10  Score=70.04  Aligned_cols=76  Identities=13%  Similarity=0.079  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++.+..++..+|+|.+.........+.+..|+.++.. .+|||++++++++...+.+|++|||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   91 (255)
T cd08219          15 RALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAK-MKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKL   91 (255)
T ss_pred             EEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHh-CCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHh
Confidence            3677888889999999999755444456778889999877 5999999999999999999999999999 98887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.16  E-value=5.3e-10  Score=71.77  Aligned_cols=76  Identities=20%  Similarity=0.229  Sum_probs=61.3

Q ss_pred             cceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....++   ..+|+|.+...........+..|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++.
T Consensus        19 ~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   97 (267)
T cd05066          19 EVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQ-FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLR   97 (267)
T ss_pred             ceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHH
Confidence            35666655444   36999998765445556788899999887 5999999999999999999999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        98 ~   98 (267)
T cd05066          98 K   98 (267)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.16  E-value=6.5e-10  Score=77.50  Aligned_cols=74  Identities=11%  Similarity=0.099  Sum_probs=59.7

Q ss_pred             cceeEEEccC-CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLD-PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~-~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+ +..+|+|.+... .......+..|+.+|.. ++||||+++++.+..++.+||+|||++| +|.+++.
T Consensus        82 ~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~-l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~  157 (478)
T PTZ00267         82 AAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAA-CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIK  157 (478)
T ss_pred             EEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHH
Confidence            3566766666 778899877533 23345567789999887 5999999999999999999999999999 9988775

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.16  E-value=3.7e-10  Score=72.82  Aligned_cols=75  Identities=13%  Similarity=0.187  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++++....+|..+|+|.+...........+..|+.++.. ++|||++++++++...+..+++|||++++|.+++.
T Consensus        15 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~   89 (284)
T cd07836          15 TVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKE-LKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMD   89 (284)
T ss_pred             EEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHh-hcCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHH
Confidence            5778888889999999999765433335567789999887 49999999999999999999999999997666654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.16  E-value=4.3e-10  Score=74.26  Aligned_cols=77  Identities=8%  Similarity=0.094  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+|+|.+....  .......+..|...+.+..+||||+++++.+...+.+|++|||+++ +|...+..
T Consensus        10 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   89 (321)
T cd05603          10 KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR   89 (321)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH
Confidence            47889999999999999997532  2223455666766544446999999999999999999999999999 98877653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.16  E-value=4.5e-10  Score=75.20  Aligned_cols=76  Identities=12%  Similarity=0.172  Sum_probs=60.9

Q ss_pred             cceeEEEccCC-CEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDP-DSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~-~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....++ ..+|+|.+....  .....+.+..|+.++.. ++||||+++++++..++.+|++|||+++ +|.+++.
T Consensus        45 ~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~  123 (340)
T PTZ00426         45 RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNY-INHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLR  123 (340)
T ss_pred             EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence            35666655554 689999997531  22345678899999887 5999999999999999999999999999 9998886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       124 ~  124 (340)
T PTZ00426        124 R  124 (340)
T ss_pred             H
Confidence            5

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.15  E-value=1.1e-09  Score=69.75  Aligned_cols=75  Identities=15%  Similarity=0.183  Sum_probs=63.7

Q ss_pred             ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +.++....++..+++|.+... .+......+.+|++++.+ .+||||+++++++...+.++++|||+++ +|.+++..
T Consensus        16 v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~   92 (256)
T cd08221          16 ATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSL-LQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVR   92 (256)
T ss_pred             EEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHh-CCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHh
Confidence            466777788999999998754 234456778899999888 5999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=4.9e-10  Score=72.86  Aligned_cols=75  Identities=9%  Similarity=0.014  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+++.+|+|.+....  .......+.+|+.++.. ++||||+++++++..++.++++|||+++ +|.+++.
T Consensus        15 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   92 (285)
T cd05605          15 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY   92 (285)
T ss_pred             EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHh-cCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHH
Confidence            46778888899999999997532  12223456789999887 4999999999999999999999999999 9987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.14  E-value=6.4e-10  Score=72.04  Aligned_cols=75  Identities=11%  Similarity=0.009  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+|+.+|+|.+.....  ......+..|++++.. ++||||+++++.+...+.+|++|||++| +|.+++.
T Consensus         8 ~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~   85 (277)
T cd05607           8 EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEK-VNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIY   85 (277)
T ss_pred             EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHh-cCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHH
Confidence            478888889999999999974211  1123345679999888 4999999999999999999999999999 9987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.14  E-value=5.7e-10  Score=73.63  Aligned_cols=75  Identities=13%  Similarity=0.055  Sum_probs=59.5

Q ss_pred             ceeEEE---ccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         12 PELGLA---RLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        12 ~~l~~~---~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      |+++..   ..+|..+|+|++.... .......+..|+.+|.+ ++||||+++++++..++.+|++|||+++ +|.+++.
T Consensus        12 Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   90 (318)
T cd05582          12 VFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAE-VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS   90 (318)
T ss_pred             EEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHh-CCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence            445543   4588999999997532 22234567789999888 5999999999999999999999999999 9988875


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      +
T Consensus        91 ~   91 (318)
T cd05582          91 K   91 (318)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.14  E-value=7.7e-10  Score=70.20  Aligned_cols=76  Identities=16%  Similarity=0.266  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+++|.+... ........+..|+.++.. .+|||++++++++...+..+++|||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   92 (256)
T cd08529          15 VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAK-LDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKM   92 (256)
T ss_pred             EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHh-cCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHH
Confidence            4677888889999999999753 344456778899999887 5999999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.14  E-value=3e-10  Score=75.81  Aligned_cols=76  Identities=16%  Similarity=0.188  Sum_probs=60.8

Q ss_pred             ceeEEE-----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHH
Q psy13291         12 PELGLA-----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~-----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~   84 (89)
                      |++|..     ..+++.+|+|.+...........+.+|+.+|..+.+||||+++++++... ..++++||||++ +|.++
T Consensus        23 V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~  102 (343)
T cd05103          23 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNY  102 (343)
T ss_pred             EEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHH
Confidence            555552     35678899999976544455677889999998866899999999988664 578999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       103 i~~  105 (343)
T cd05103         103 LRS  105 (343)
T ss_pred             HHh
Confidence            864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0580|consensus

Probab=99.14  E-value=2.5e-11  Score=78.21  Aligned_cols=75  Identities=13%  Similarity=0.092  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++..+.++.++|+|++....  ......++.+|++|=+. +.||||+++|++|.+...+|+++||++. ++...|+
T Consensus        37 ~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~-L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~  114 (281)
T KOG0580|consen   37 NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSH-LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQ  114 (281)
T ss_pred             cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecc-cCCccHHhhhhheeccceeEEEEEecCCchHHHHHH
Confidence            68999999999999999997532  22335678899999544 6999999999999999999999999999 8877776

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.14  E-value=5.9e-10  Score=73.87  Aligned_cols=77  Identities=9%  Similarity=0.017  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..||+|++....  .....+.+..|..++....+||+|+.+++++...+.+|++|||++| +|.+++..
T Consensus        15 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~   94 (323)
T cd05615          15 KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ   94 (323)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH
Confidence            57889999999999999997531  2233556778888887765778888999999999999999999999 99888764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.13  E-value=1.3e-09  Score=69.84  Aligned_cols=75  Identities=15%  Similarity=0.269  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+..... .....+.+|+.++.. ..||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        24 ~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~-~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~   99 (267)
T cd06646          24 DVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKE-CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV   99 (267)
T ss_pred             EEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHh-cCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence            467788788999999999975422 224567789999887 5999999999999999999999999999 99988753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.13  E-value=4.1e-10  Score=72.41  Aligned_cols=68  Identities=16%  Similarity=0.277  Sum_probs=55.6

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .+..|+||.+......+..+.+..|+..+.++ +||||++++|.+...+.+++++|||++ +|+++|...
T Consensus        27 ~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~   95 (259)
T PF07714_consen   27 KNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSK   95 (259)
T ss_dssp             SEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHT
T ss_pred             CCEEEEEEEeccccccccceeeeecccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            45679999996555555678899999999885 999999999999988889999999998 999998764

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.13  E-value=1.5e-09  Score=69.46  Aligned_cols=75  Identities=16%  Similarity=0.291  Sum_probs=62.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+..... .....+.+|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        24 ~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~-l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   99 (267)
T cd06645          24 DVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKD-CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV   99 (267)
T ss_pred             EEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh
Confidence            467788888999999999875432 234567789988777 5999999999999999999999999999 99998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.13  E-value=1e-09  Score=71.92  Aligned_cols=76  Identities=9%  Similarity=0.065  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++.+..+++.+|+|.+....  .....+.+..|+.++.. .+||||+++++++..++.++++|||++| +|.++++.
T Consensus        16 ~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~   94 (305)
T cd05609          16 AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTF-AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN   94 (305)
T ss_pred             eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHh-CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH
Confidence            46788889999999999987542  12345678889999877 5999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.13  E-value=5.8e-10  Score=71.66  Aligned_cols=76  Identities=16%  Similarity=0.174  Sum_probs=60.2

Q ss_pred             cceeEEE--ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLA--RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~--~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++..  ..++..+|+|.+...........+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus        10 ~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   88 (269)
T cd05087          10 KVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRS-LQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRS   88 (269)
T ss_pred             eEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh-CCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHH
Confidence            3555543  245667999998765444445578889999887 5999999999999998999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=1.3e-09  Score=70.20  Aligned_cols=76  Identities=12%  Similarity=0.208  Sum_probs=64.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+...........+.+|+.++.. .+|||++++++++..+..+|+++||+++ +|.+++..
T Consensus        16 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (274)
T cd06609          16 EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ-CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP   92 (274)
T ss_pred             EEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHH-cCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh
Confidence            4677888889999999999765444455678889999887 4899999999999999999999999999 99988764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0593|consensus

Probab=99.13  E-value=4.1e-11  Score=79.67  Aligned_cols=73  Identities=10%  Similarity=0.022  Sum_probs=62.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHH-HHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEH-KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~-~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|..|.++.||++||||.+....++... .-.++|+.+|.+ +.|||+|.+..+|.....+++|+|||+. -|+++
T Consensus        17 vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKq-LkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eL   91 (396)
T KOG0593|consen   17 VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQ-LKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHEL   91 (396)
T ss_pred             EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHh-cccchHHHHHHHHHhcceeEEEeeecchHHHHHH
Confidence            3678899999999999999866554434 556999999999 5999999999999999999999999999 55554

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.13  E-value=6.4e-10  Score=72.10  Aligned_cols=76  Identities=12%  Similarity=0.117  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...........+.+|+.++.. ++||||+++++++...+..+++|||++++|.+++.+
T Consensus        20 ~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~   95 (291)
T cd07844          20 TVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKD-LKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDD   95 (291)
T ss_pred             EEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhh-CCCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHh
Confidence            4677888888999999999754322223456789999887 599999999999999999999999999877776654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.13  E-value=7.2e-10  Score=72.72  Aligned_cols=75  Identities=11%  Similarity=0.132  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|+++....++..+|+|.+...........+.+|+.++.. ++||||+++++++..++..+++|||++++|.+++.
T Consensus        21 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~   95 (309)
T cd07872          21 TVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMD   95 (309)
T ss_pred             EEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHh-CCCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHH
Confidence            4677888889999999999754333334456789999887 59999999999999999999999999986666554

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=1.2e-09  Score=69.47  Aligned_cols=75  Identities=15%  Similarity=0.252  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+..... ...+.+..|+.++.. ++|||++++++++...+.+|++|||+++ +|.+++..
T Consensus        18 ~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~   93 (262)
T cd06613          18 DVYKARDIATGELVAIKVIKLEPG-DDFEIIQQEISMLKE-CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV   93 (262)
T ss_pred             EEEEeEecCCCCEEEEEEEEcCch-hhHHHHHHHHHHHHh-CCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence            466777778889999999975432 246778899999887 5999999999999999999999999999 99998865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.12  E-value=1e-09  Score=72.95  Aligned_cols=76  Identities=11%  Similarity=0.072  Sum_probs=62.5

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+++.+|+|.+...  ......+.+..|..++.. .+||||+.+++++..++..|++|||++| +|.+++.+
T Consensus        16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~   94 (331)
T cd05624          16 EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence            4678888889999999999752  122334557778888766 5999999999999999999999999999 99999865

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.12  E-value=1.5e-09  Score=69.43  Aligned_cols=75  Identities=9%  Similarity=0.253  Sum_probs=63.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+.+....++..+|+|.+...  .+......+..|+.++.. .+|||++++++++...+..|+++||+++ +|.+++.
T Consensus        17 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~   94 (267)
T cd08228          17 EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQ-LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIK   94 (267)
T ss_pred             eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHh-CCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHH
Confidence            4677888889999999988642  233445678889999887 5999999999999999999999999999 9988875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0694|consensus

Probab=99.12  E-value=2.3e-10  Score=81.81  Aligned_cols=72  Identities=13%  Similarity=0.093  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      ||-|+..+.+++.+|||.++..  ..+++.+....|-.|+...-.||++++++++|+..+++|.+|||+.| ++.
T Consensus       383 kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~  457 (694)
T KOG0694|consen  383 KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLM  457 (694)
T ss_pred             eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEE
Confidence            7899999999999999999864  34456888999999988766899999999999999999999999999 843

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=3.9e-10  Score=74.97  Aligned_cols=76  Identities=14%  Similarity=0.116  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|++....  .......+..|+.++.. .+||||+++++++..++.+|++|||+++ +|.+++.+
T Consensus        16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   94 (350)
T cd05573          16 EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD-ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR   94 (350)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHh-cCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHH
Confidence            57888888899999999997531  22345667889999887 5999999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.11  E-value=1.1e-09  Score=71.26  Aligned_cols=76  Identities=13%  Similarity=0.124  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+++.+|+|.+....  .....+.+.+|+.++.. ++||||+++++++...+.++++|||+++ +|.+++++
T Consensus        16 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   94 (290)
T cd05580          16 RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQS-IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK   94 (290)
T ss_pred             EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH
Confidence            46778888899999999997532  22345678899999887 4899999999999999999999999988 99988864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.11  E-value=1.7e-09  Score=68.87  Aligned_cols=76  Identities=24%  Similarity=0.280  Sum_probs=65.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+.........+.+..|+..+... .|||++++++.+...+.+++++||+++ +|.+++..
T Consensus        16 ~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   92 (264)
T cd06623          16 VVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK   92 (264)
T ss_pred             EEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHH
Confidence            46788888899999999997654434567788999998884 899999999999999999999999998 99998864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0585|consensus

Probab=99.11  E-value=2.8e-10  Score=79.18  Aligned_cols=69  Identities=9%  Similarity=0.075  Sum_probs=57.6

Q ss_pred             ccceeEEEccCCCEEEEEEEeecC-------------CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEe
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTV-------------NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICM   74 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~-------------~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~   74 (89)
                      -+|+||++..++..||+|+++...             .....+++.+|++||.+ ++|||||+++.+.-++  +.+|+|+
T Consensus       111 GkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk-l~H~nVV~LiEvLDDP~s~~~YlVl  189 (576)
T KOG0585|consen  111 GKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK-LHHPNVVKLIEVLDDPESDKLYLVL  189 (576)
T ss_pred             ceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh-cCCcCeeEEEEeecCcccCceEEEE
Confidence            479999999999999999997521             11235689999999988 5999999999998774  5899999


Q ss_pred             cchhc
Q psy13291         75 EVMDT   79 (89)
Q Consensus        75 E~~~~   79 (89)
                      |||..
T Consensus       190 ey~s~  194 (576)
T KOG0585|consen  190 EYCSK  194 (576)
T ss_pred             EeccC
Confidence            99986

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.11  E-value=1.3e-09  Score=72.08  Aligned_cols=77  Identities=8%  Similarity=0.015  Sum_probs=62.5

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....++..+|+|++...  ......+.+..|..++....+|++|+.+++++...+.+|++|||+++ +|.+++..
T Consensus        15 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~   94 (324)
T cd05587          15 KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ   94 (324)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH
Confidence            4788888889999999999753  12334567788999988764556788899999999999999999999 99888754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.11  E-value=8.9e-10  Score=70.74  Aligned_cols=75  Identities=12%  Similarity=0.145  Sum_probs=58.8

Q ss_pred             ceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++...  .....+|+|.+...........+.+|+.++.. .+||||+++++.+...+.+|++|||+++ +|.+++..
T Consensus        11 v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~-l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   88 (269)
T cd05042          11 VLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRE-LNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRS   88 (269)
T ss_pred             EEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHh-CCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHh
Confidence            4555322  24457888887655444456678899999876 5999999999999999999999999999 99998865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.11  E-value=1.6e-09  Score=69.12  Aligned_cols=76  Identities=12%  Similarity=0.265  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....+|..+|+|.+...  .+....+.+.+|+.++.. .+|||++++++++...+..+++|||+++ +|.+++..
T Consensus        17 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   95 (267)
T cd08224          17 VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQ-LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKH   95 (267)
T ss_pred             EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHh-CCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHH
Confidence            4677788889999999998642  233346778899999888 5999999999999999999999999999 99988854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0661|consensus

Probab=99.11  E-value=3.6e-11  Score=83.31  Aligned_cols=77  Identities=9%  Similarity=0.056  Sum_probs=63.8

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhccHHHHHhhc
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~sL~~~l~~~   88 (89)
                      |++|.+..+|..||||.|....-..+.-.-++|+.-|.++-.|||||.+++++.+++ .+|+|||||+.+|.++++..
T Consensus        26 V~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R  103 (538)
T KOG0661|consen   26 VYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDR  103 (538)
T ss_pred             EEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhc
Confidence            788999999999999999764333223334789999998634999999999999988 99999999999999998753

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.11  E-value=5.1e-10  Score=72.43  Aligned_cols=75  Identities=12%  Similarity=0.102  Sum_probs=61.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+++.+|+|.+.... .....+.+.+|+.++.. .+||||+++++++...+.+|++|||+++ +++.+.+
T Consensus        16 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~   92 (287)
T cd07848          16 VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRT-LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE   92 (287)
T ss_pred             EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHh-CCCccccchhhhEecCCEEEEEEecCCCCHHHHHHh
Confidence            47888888999999999997542 22345677889999887 5999999999999999999999999999 7765543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.11  E-value=1e-09  Score=70.46  Aligned_cols=76  Identities=17%  Similarity=0.222  Sum_probs=62.5

Q ss_pred             cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .++++....++.   .+|+|.+...........+..|+.++.. ..||||+++++++..++..+++|||+++ +|+++++
T Consensus        19 ~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   97 (269)
T cd05065          19 EVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLR   97 (269)
T ss_pred             eEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHh
Confidence            456666665554   6999998765455557789999999887 5999999999999999999999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        98 ~   98 (269)
T cd05065          98 Q   98 (269)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.11  E-value=1.1e-09  Score=72.45  Aligned_cols=77  Identities=8%  Similarity=0.116  Sum_probs=60.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..++..+|+|++....  .......+..|...+.+..+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   89 (325)
T cd05602          10 KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR   89 (325)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh
Confidence            47888888999999999997532  1222345555665544446999999999999999999999999999 99888764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0663|consensus

Probab=99.10  E-value=3e-10  Score=76.34  Aligned_cols=75  Identities=11%  Similarity=0.135  Sum_probs=60.3

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      ||.|....|+++||+|.++..... -..-..++|+.+|.+ .+|||||.+-.+..-  -+.+|||||||+.+|..++..
T Consensus        92 VYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~-~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~  169 (419)
T KOG0663|consen   92 VYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLK-ARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMET  169 (419)
T ss_pred             EEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHh-cCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHh
Confidence            677888899999999999764321 233457889999988 489999999887765  468999999999988888754

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.10  E-value=7.7e-10  Score=73.24  Aligned_cols=77  Identities=16%  Similarity=0.062  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHh--cCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMR--SSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~--~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++....+|..+|+|.+....  .....+.+.+|..++..  ..+||||+++++++...+.+|++|||+++ +|..++
T Consensus        14 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~   93 (324)
T cd05589          14 KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI   93 (324)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh
Confidence            47888888899999999997531  22345667777776542  24799999999999999999999999999 998776


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        94 ~~   95 (324)
T cd05589          94 HT   95 (324)
T ss_pred             hc
Confidence            54

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.10  E-value=1.5e-09  Score=69.38  Aligned_cols=76  Identities=12%  Similarity=0.109  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+....  .....+.+.+|+.++.. .+||||+++++.+..++.+++++||+++ +|.+++.+
T Consensus         8 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   86 (262)
T cd05572           8 RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEE-CNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD   86 (262)
T ss_pred             EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHh-CCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh
Confidence            46788888889999999997543  22345678899999887 4999999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.10  E-value=1.5e-09  Score=70.10  Aligned_cols=76  Identities=11%  Similarity=0.047  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+|+|.+....  .......+..|+.+|.. .+|||++.+++++...+.+|++|||+++ +|.+++.+
T Consensus         8 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   86 (277)
T cd05577           8 EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEK-VSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYN   86 (277)
T ss_pred             eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHh-CCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHH
Confidence            47788888899999999997532  22234556789999887 4899999999999999999999999999 99988754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=1.6e-09  Score=69.17  Aligned_cols=77  Identities=10%  Similarity=0.081  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|.+....  .......+..|..++....+|||++++++++...+.+|+++||+++ +|.++++.
T Consensus        11 ~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   90 (260)
T cd05611          11 SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKT   90 (260)
T ss_pred             eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHH
Confidence            46778888899999999986532  1222344566666655556999999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.10  E-value=2.4e-09  Score=69.63  Aligned_cols=75  Identities=16%  Similarity=0.278  Sum_probs=63.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+... +....+.+..|+.++.. +.|||++++++.+..++.+|++|||+++ +|+.++.+
T Consensus        27 ~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  102 (292)
T cd06644          27 KVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILAT-CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE  102 (292)
T ss_pred             EEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHh-CCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence            5788888889999999998743 34456778889999887 5999999999999999999999999999 99887643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.09  E-value=1.5e-09  Score=70.58  Aligned_cols=75  Identities=9%  Similarity=0.014  Sum_probs=61.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+|..+|+|.+....  .......+.+|+.++.. ++|||++.+++++..++..+++||||++ +|.+++.
T Consensus        15 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~   92 (285)
T cd05631          15 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEK-VNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY   92 (285)
T ss_pred             EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHh-cCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHH
Confidence            46788888899999999997532  12223457789999888 5999999999999999999999999999 9987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.09  E-value=1.3e-09  Score=71.53  Aligned_cols=77  Identities=14%  Similarity=0.206  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCE--EEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDS--EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~--~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..  +|+|.+...........+.+|+.++.++.+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        22 ~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  101 (303)
T cd05088          22 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK  101 (303)
T ss_pred             eEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHh
Confidence            4677877777754  57777764444445667888999988865899999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.09  E-value=2.7e-09  Score=69.10  Aligned_cols=75  Identities=16%  Similarity=0.285  Sum_probs=63.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .++.+....++..+|+|.+.....  ..+.+..|+.++.. .+|||++++++++..++..|+++||+++ +|.+++...
T Consensus        34 ~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (286)
T cd06614          34 EVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKD-CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN  109 (286)
T ss_pred             EEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHH-CCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHh
Confidence            467777777899999999975433  35678889999887 5999999999999999999999999998 999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.08  E-value=1.8e-09  Score=68.44  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=61.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.. .++..+|+|.+...........+.+|+.++.. .+||||+++++.+...+..|++|||+++ +|.+++..
T Consensus        10 ~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   85 (250)
T cd05085          10 EVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQ-YDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRK   85 (250)
T ss_pred             eEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHh-CCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHh
Confidence            4566664 46788999998765544445678899999887 5999999999999999999999999999 99988754

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.08  E-value=2.5e-09  Score=68.64  Aligned_cols=75  Identities=15%  Similarity=0.007  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.+....++..+|+|.+.... ....+.+.+|+.++.. .+||||+++++++..++..++++||+++ +|.+++..
T Consensus        23 ~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   98 (268)
T cd06624          23 IVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSY-LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRS   98 (268)
T ss_pred             EEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHh-cCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHH
Confidence            46777777888999999887543 3346678899999887 5999999999999999999999999999 99998864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.08  E-value=1.9e-09  Score=69.12  Aligned_cols=76  Identities=21%  Similarity=0.224  Sum_probs=61.6

Q ss_pred             cceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+.|....+   ...+|+|.+...........+..|+.++.. .+||||+++++.+...+..+++|||+++ +|++++.
T Consensus        19 ~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~   97 (266)
T cd05033          19 EVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQ-FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLR   97 (266)
T ss_pred             eEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHh-CCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHH
Confidence            4556655433   457999998765555556778899999887 5999999999999999999999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        98 ~   98 (266)
T cd05033          98 E   98 (266)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.08  E-value=1.7e-09  Score=69.97  Aligned_cols=75  Identities=15%  Similarity=0.109  Sum_probs=60.7

Q ss_pred             cceeEEE----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLA----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++..    ..++..+|+|.+...........+.+|+.++.. ++||||+++++.+..++..|++|||+++ +|.+++
T Consensus        20 ~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   98 (283)
T cd05090          20 KIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAE-LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFL   98 (283)
T ss_pred             ceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhh-CCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHH
Confidence            3555553    235578999999765545556778899999887 5999999999999999999999999999 999887


Q ss_pred             h
Q psy13291         86 T   86 (89)
Q Consensus        86 ~   86 (89)
                      .
T Consensus        99 ~   99 (283)
T cd05090          99 I   99 (283)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.08  E-value=2.1e-09  Score=68.91  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=61.9

Q ss_pred             cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....++.   .+|+|.+.........+.+..|+.++.. ..|||++++++++...+.++++|||+++ +|.+++.
T Consensus        20 ~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   98 (268)
T cd05063          20 EVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQ-FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLR   98 (268)
T ss_pred             cEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHH
Confidence            466666655554   6999998765444556778899999877 5999999999999999999999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        99 ~   99 (268)
T cd05063          99 D   99 (268)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.08  E-value=3e-09  Score=69.62  Aligned_cols=75  Identities=9%  Similarity=0.211  Sum_probs=62.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+...... ..+.+..|+.++.. .+|||++++++.+..++..|++|||+++ +|.+++..
T Consensus        34 ~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  109 (297)
T cd06656          34 TVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  109 (297)
T ss_pred             EEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh
Confidence            4677777789999999999754332 34667889999877 5999999999999999999999999999 99988754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.08  E-value=2.4e-09  Score=70.84  Aligned_cols=77  Identities=10%  Similarity=0.014  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+....  .....+....|..++....+||+|+.+++++...+.+|++|||+++ +|.+.+..
T Consensus        15 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~   94 (323)
T cd05616          15 KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ   94 (323)
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH
Confidence            57888888899999999997532  2233455677888877766799999999999999999999999999 99887754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.08  E-value=1.8e-09  Score=70.86  Aligned_cols=69  Identities=17%  Similarity=0.158  Sum_probs=58.0

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++..+|+|.+.........+.+..|+.++..+.+||||+++++++...+.+|++|||+++ +|.++++.
T Consensus        63 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~  132 (302)
T cd05055          63 DAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRR  132 (302)
T ss_pred             CceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHh
Confidence            3456799999876544555678899999998855899999999999999999999999998 99998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.07  E-value=2.2e-09  Score=68.14  Aligned_cols=76  Identities=13%  Similarity=0.174  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+.... .......+.+|+.+|.. .+|||++++++.+...+..+++|||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (256)
T cd08220          15 IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL-LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQK   92 (256)
T ss_pred             EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhh-CCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHH
Confidence            35677788899999999997542 33456778899999887 5999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.07  E-value=1.6e-09  Score=69.26  Aligned_cols=76  Identities=14%  Similarity=0.161  Sum_probs=63.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .++++....++..+|+|.+.....     ....+.+..|+.++.. +.|||++++++.+...+..++++||+++ +|.++
T Consensus        15 ~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~   93 (268)
T cd06630          15 SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMAR-LNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHL   93 (268)
T ss_pred             EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHH-cCCCceehhhceeccCCeEEEEEeccCCCcHHHH
Confidence            356777778999999999975321     1235678899999888 5999999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        94 l~~   96 (268)
T cd06630          94 LSK   96 (268)
T ss_pred             HHH
Confidence            864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.07  E-value=3.6e-09  Score=67.40  Aligned_cols=76  Identities=12%  Similarity=0.207  Sum_probs=63.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+.........+.+.+|+.++.. ..|||++++++.+...+..|+++||+++ +|.++++.
T Consensus        16 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~   92 (267)
T cd06610          16 VVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQ-CNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKS   92 (267)
T ss_pred             EEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHh-cCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHH
Confidence            3566666778899999999754433356788999999877 5999999999999999999999999999 99998864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.07  E-value=1.6e-09  Score=69.68  Aligned_cols=76  Identities=20%  Similarity=0.236  Sum_probs=61.7

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++...     .++..+|+|.+......+..+.+.+|+.+|.. +.||||+++++.+...+..|++|||+++ +|.++
T Consensus        20 ~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   98 (280)
T cd05049          20 KVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN-FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKF   98 (280)
T ss_pred             eEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHh-cCCCCchheeeEEecCCCeEEEEecCCCCCHHHH
Confidence            35555443     34578999999765444456788999999887 5999999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus        99 i~~  101 (280)
T cd05049          99 LRS  101 (280)
T ss_pred             HHh
Confidence            864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.07  E-value=3.8e-09  Score=69.06  Aligned_cols=75  Identities=9%  Similarity=0.213  Sum_probs=62.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+...... ..+.+.+|+.++.. ..|||++++++.+..++..|++|||+++ +|.+++..
T Consensus        35 ~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~-~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  110 (296)
T cd06654          35 TVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  110 (296)
T ss_pred             EEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHh-CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh
Confidence            3567777788999999999754333 35668889999877 5999999999999999999999999999 99998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.07  E-value=2.3e-09  Score=79.83  Aligned_cols=76  Identities=16%  Similarity=0.130  Sum_probs=64.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++....  .....+++.+|+.++.. .+||||+++++.+...+..|++|||++| +|.+++..
T Consensus        17 ~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~-L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s   95 (932)
T PRK13184         17 EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAAD-LIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKS   95 (932)
T ss_pred             EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHh-CCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHH
Confidence            47888888999999999997542  23345678999999887 5999999999999999999999999999 99998863

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.07  E-value=3e-09  Score=69.21  Aligned_cols=75  Identities=9%  Similarity=0.016  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+++.+|+|.+....  .......+..|+.++.. ++|||++.+++++...+.+|++|||+++ +|.+++.
T Consensus        15 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~   92 (285)
T cd05630          15 EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEK-VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY   92 (285)
T ss_pred             EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHh-CCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHH
Confidence            36788888999999999987532  22223557789999887 5999999999999999999999999999 9988874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.07  E-value=2e-09  Score=71.12  Aligned_cols=76  Identities=12%  Similarity=0.192  Sum_probs=59.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~   84 (89)
                      .|+++....+|..+|+|.+.... .......+.+|+.++.. ++||||+++++++...+     .+|++||||+++|.++
T Consensus        15 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~   93 (338)
T cd07859          15 VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRL-LRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQV   93 (338)
T ss_pred             EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHh-CCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHH
Confidence            47788888899999999997432 22334568899999887 59999999999886532     5899999997788777


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        94 l~~   96 (338)
T cd07859          94 IKA   96 (338)
T ss_pred             HHh
Confidence            754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.06  E-value=3.4e-09  Score=67.21  Aligned_cols=76  Identities=21%  Similarity=0.264  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .++.+....++..+|+|.+.....    ....+.+.+|++++.. .+|||++++++.+...+.+++++||+++ +|.+++
T Consensus        15 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   93 (258)
T cd06632          15 SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSK-LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL   93 (258)
T ss_pred             eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHh-cCCCCchheeeeEecCCeEEEEEEecCCCcHHHHH
Confidence            567777777899999999875321    2345678899999887 5999999999999999999999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      .+
T Consensus        94 ~~   95 (258)
T cd06632          94 KK   95 (258)
T ss_pred             Hh
Confidence            65

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.06  E-value=2.4e-09  Score=68.90  Aligned_cols=77  Identities=14%  Similarity=0.209  Sum_probs=62.1

Q ss_pred             cceeEEEccCCC--EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPD--SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~--~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|.  .+|+|.+.........+.+..|+.++..+.+||||+++++.+...+.+|++|||+++ +|.+++..
T Consensus        10 ~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~   89 (270)
T cd05047          10 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK   89 (270)
T ss_pred             eEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHh
Confidence            356676666665  468888875444455677889999988866899999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=3.4e-09  Score=67.60  Aligned_cols=76  Identities=17%  Similarity=0.187  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .++.+....++..+|+|.+.....    ....+.+.+|+.++.. ++||||+++++++..++.+++++||+++ +|.+++
T Consensus        17 ~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~   95 (263)
T cd06625          17 RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN-LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQL   95 (263)
T ss_pred             EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHh-CCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHH
Confidence            467777788999999999875321    1234578889999887 5999999999999999999999999999 998887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        96 ~~   97 (263)
T cd06625          96 KA   97 (263)
T ss_pred             HH
Confidence            54

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.06  E-value=1.9e-09  Score=68.93  Aligned_cols=76  Identities=11%  Similarity=0.252  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      -|+++....+|..+|+|.+....  +.....++.+|+.++.. .+||||+++++++..++..+++|||+++ +|.++++.
T Consensus        17 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   95 (267)
T cd08229          17 EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ-LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH   95 (267)
T ss_pred             EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHH-ccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHH
Confidence            36778888899999999887532  22345678899999887 5999999999999999999999999999 99998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.06  E-value=2.1e-09  Score=71.20  Aligned_cols=75  Identities=9%  Similarity=-0.016  Sum_probs=59.2

Q ss_pred             ceeEEE---ccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         12 PELGLA---RLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~---~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      |+++..   ..+++.+|+|.+....   .......+..|+.+|.. ++||||+++++.+..++.+|++|||+++ +|.++
T Consensus        12 V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   90 (323)
T cd05584          12 VFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEA-VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMH   90 (323)
T ss_pred             EEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHh-CCCCchhceeeEEecCCeEEEEEeCCCCchHHHH
Confidence            455554   3578899999997531   22234567789999887 5999999999999999999999999999 99888


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +.+
T Consensus        91 ~~~   93 (323)
T cd05584          91 LER   93 (323)
T ss_pred             HHH
Confidence            754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.06  E-value=2.8e-09  Score=69.03  Aligned_cols=74  Identities=55%  Similarity=0.857  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~   84 (89)
                      .|+.+.+..+|..+|+|.+...........+..|+.++.+..+||||+++++.+..++..|++|||+++++.++
T Consensus        19 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l   92 (288)
T cd06616          19 TVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKF   92 (288)
T ss_pred             EEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHH
Confidence            46778888899999999997654444566788999998886569999999999999999999999988755544

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.06  E-value=1.8e-09  Score=69.45  Aligned_cols=76  Identities=14%  Similarity=0.142  Sum_probs=59.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++++....++..+|+|.+.....+........|+.++.++.+|||++++++++..+  +.++++|||+++++.+.+.
T Consensus        14 ~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~   91 (282)
T cd07831          14 EVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIK   91 (282)
T ss_pred             eEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCccHHHHHH
Confidence            577888888999999999875433323334567888888765799999999999987  8999999999985555544

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.06  E-value=2.4e-09  Score=69.03  Aligned_cols=75  Identities=9%  Similarity=0.153  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|+.+....+|..+|+|.+..... ......+..|+.++.. ++|||++++++++..++..|++|||++++|.+++.
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~   90 (285)
T cd07861          15 VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKE-LQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLD   90 (285)
T ss_pred             EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHh-cCCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHh
Confidence            467788888999999999865322 2234567789999887 48999999999999999999999999887666654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=2.8e-09  Score=70.00  Aligned_cols=76  Identities=14%  Similarity=0.060  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....++..+|+|.+......  ...+.+..|+.++.. ..||||+++++.+...+..|++|||+.+ +|.+++..
T Consensus        16 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   94 (316)
T cd05574          16 RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT-LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQR   94 (316)
T ss_pred             EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHh-CCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHh
Confidence            4678888889999999999764322  346678899999887 5899999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.05  E-value=2e-09  Score=69.80  Aligned_cols=67  Identities=10%  Similarity=0.083  Sum_probs=57.5

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+...........+.+|+.++.. .+|||++++++++..++..++++||+++ +|.+++..
T Consensus        34 ~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  101 (288)
T cd05050          34 PFTMVAVKMLKEEASADMQADFQREAALMAE-FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRH  101 (288)
T ss_pred             cceeEEEEecCCCcCHHHHHHHHHHHHHHHh-cCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHH
Confidence            5678999999765555556778899999887 5999999999999999999999999999 99999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=3.2e-09  Score=67.84  Aligned_cols=76  Identities=16%  Similarity=0.267  Sum_probs=62.1

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhc-cHH
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDT-SLD   82 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~-sL~   82 (89)
                      -.+++|....+++.+|+|.+.....  ..+.+..|+.++....+||||+++++.+....      .+|++|||+++ +|.
T Consensus        20 ~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~   97 (275)
T cd06608          20 GKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVT   97 (275)
T ss_pred             eEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHH
Confidence            3577888888899999999875432  34678899999888668999999999997644      59999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus        98 ~~~~~  102 (275)
T cd06608          98 DLVKG  102 (275)
T ss_pred             HHHHH
Confidence            88764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=2.5e-09  Score=70.91  Aligned_cols=77  Identities=10%  Similarity=0.027  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcC--CCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSS--DCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~--~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++....+|..+|+|++....  ..........|..++....  +||||+.+++.+...+.+|++|||+++ +|.+++
T Consensus         8 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l   87 (330)
T cd05586           8 QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHL   87 (330)
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHH
Confidence            57888899999999999997431  1223445566777766544  899999999999999999999999999 988777


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        88 ~~   89 (330)
T cd05586          88 QK   89 (330)
T ss_pred             Hh
Confidence            54

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.05  E-value=2.7e-09  Score=68.94  Aligned_cols=75  Identities=19%  Similarity=0.177  Sum_probs=61.5

Q ss_pred             ceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+.+....     ++..+|+|.+...........+..|+.++.. ++||||+++++.+...+..+++|||+++ +|.+++
T Consensus        22 vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i  100 (277)
T cd05036          22 VYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSK-FNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL  100 (277)
T ss_pred             EEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHH
Confidence            55666655     6778999988755444445678899999887 5999999999999999999999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       101 ~~  102 (277)
T cd05036         101 RE  102 (277)
T ss_pred             HH
Confidence            64

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.05  E-value=2.6e-09  Score=68.92  Aligned_cols=67  Identities=15%  Similarity=0.275  Sum_probs=55.7

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+...........+.+|+.++.. .+||||+++++.+...+..+++|||+++ +|+++++.
T Consensus        35 ~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  102 (277)
T cd05062          35 PETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS  102 (277)
T ss_pred             ceeEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHH
Confidence            4567999988654433445678899999887 5999999999999988999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0579|consensus

Probab=99.05  E-value=2.5e-11  Score=87.25  Aligned_cols=74  Identities=19%  Similarity=0.249  Sum_probs=65.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      |||.|.++.++-..|.|+|. +...++.++++-|+.||.. +.||+|+.++++|+.++.+||++|||.| .++.++-
T Consensus        47 KVyKA~nket~~lAAaKvIe-tkseEELEDylVEIeILa~-CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaiml  121 (1187)
T KOG0579|consen   47 KVYKAVNKETKLLAAAKVIE-TKSEEELEDYLVEIEILAE-CDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIML  121 (1187)
T ss_pred             hhhhhhcccchhhhhhhhhc-ccchhHHhhhhhhhhhhhc-CCChHHHHHHHHHhccCceEEEEeecCCchHhHHHH
Confidence            68888888889899999997 4455679999999999988 5899999999999999999999999999 8887763

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.04  E-value=5.3e-09  Score=68.59  Aligned_cols=75  Identities=11%  Similarity=0.234  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++++....+|..+|+|.+...  ......+.+.+|+.++.. .+|||++++++++...+..|+++||++|++.+++.
T Consensus        30 ~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~  106 (307)
T cd06607          30 AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQ-LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILE  106 (307)
T ss_pred             EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHH
Confidence            4677777788999999998643  223345678899999887 59999999999999999999999999996555543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.04  E-value=3.1e-09  Score=69.92  Aligned_cols=68  Identities=10%  Similarity=0.226  Sum_probs=57.0

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+..+|+|.+...........+..|+.++..+.+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        43 ~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~  111 (314)
T cd05099          43 QTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRA  111 (314)
T ss_pred             cceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHh
Confidence            345689998875544555677889999988765799999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.04  E-value=4.2e-09  Score=66.82  Aligned_cols=75  Identities=19%  Similarity=0.239  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++.... +..+|+|.+...........+..|+.++.. +.||||+++++++...+..|++|||+++ +|.+++..
T Consensus        10 ~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~   85 (251)
T cd05041          10 DVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQ-YDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRK   85 (251)
T ss_pred             eEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHh
Confidence            466676656 899999998765444456778899999887 5999999999999999999999999999 99988854

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.04  E-value=3.3e-09  Score=68.47  Aligned_cols=76  Identities=12%  Similarity=0.106  Sum_probs=61.4

Q ss_pred             cceeEEEccCC-----CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDP-----DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~-----~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++.....+     ..+|+|.+.........+.+.+|+.++.. .+||||+.+++++...+..|++|||+++ +|.++
T Consensus        20 ~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~   98 (283)
T cd05048          20 KVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSD-LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEF   98 (283)
T ss_pred             cEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHh-cCCcccceEEEEEcCCCceEEEEecCCCCcHHHH
Confidence            45555544333     67999998765555556778899999887 5999999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        99 l~~  101 (283)
T cd05048          99 LVR  101 (283)
T ss_pred             HHh
Confidence            864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0983|consensus

Probab=99.04  E-value=4.4e-10  Score=74.18  Aligned_cols=78  Identities=32%  Similarity=0.454  Sum_probs=68.8

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      --|..+.++++|..+|||.+..+.+.++..+++..+.++...-++|.||+++|+|..+..+||.||.|..-++.++++
T Consensus       106 G~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkr  183 (391)
T KOG0983|consen  106 GQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKR  183 (391)
T ss_pred             cceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHH
Confidence            357788899999999999999988888899999999998776568999999999999999999999998766666654

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.04  E-value=4.6e-09  Score=66.83  Aligned_cols=76  Identities=16%  Similarity=0.201  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|+.+|+|.+... ........+.+|+.++.. .+||||+++++.+...+..|+++||+++ +|.+++..
T Consensus        15 ~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (256)
T cd08218          15 KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSN-MKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINA   92 (256)
T ss_pred             EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHh-CCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHh
Confidence            3567777788999999999753 233445678899999887 5999999999999999999999999999 99887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.04  E-value=1.9e-09  Score=70.30  Aligned_cols=65  Identities=14%  Similarity=0.253  Sum_probs=55.6

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+|+|.+.........+.+.+|++++.. ++|||++++++.+...+..|++|||+++ +|.+++..
T Consensus        45 ~~vavK~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  110 (295)
T cd05097          45 VLVAVKMLRADVTKTARNDFLKEIKIMSR-LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQ  110 (295)
T ss_pred             eEEEEEecCCCCCHHHHHHHHHHHHHHHh-CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHh
Confidence            35899999765555556778999999888 5999999999999999999999999999 99988753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.03  E-value=4e-09  Score=68.44  Aligned_cols=77  Identities=10%  Similarity=0.172  Sum_probs=60.7

Q ss_pred             cceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++....     ....+|+|.+...........+.+|+.++..+.+||||+++++++...+.+|++|||+++ +|.++
T Consensus        27 ~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~  106 (293)
T cd05053          27 QVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDF  106 (293)
T ss_pred             cEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHH
Confidence            345555443     336789999876544445667889999988755899999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       107 l~~  109 (293)
T cd05053         107 LRA  109 (293)
T ss_pred             HHh
Confidence            864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.03  E-value=2.1e-09  Score=69.04  Aligned_cols=76  Identities=16%  Similarity=0.141  Sum_probs=61.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC------H---HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-c
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN------T---QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~------~---~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-s   80 (89)
                      .|+++....+|..+|+|.+.....      .   ...+.+..|+.++.. .+|||++++++++..++..+++|||+++ +
T Consensus        16 ~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   94 (272)
T cd06629          16 RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKD-LDHLNIVQYLGFETTEEYLSIFLEYVPGGS   94 (272)
T ss_pred             EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHh-cCCCCcceEEEEeccCCceEEEEecCCCCc
Confidence            577888888899999998864211      0   123467789999877 5999999999999999999999999999 9


Q ss_pred             HHHHHhh
Q psy13291         81 LDKFYTK   87 (89)
Q Consensus        81 L~~~l~~   87 (89)
                      |.+++++
T Consensus        95 L~~~l~~  101 (272)
T cd06629          95 IGSCLRT  101 (272)
T ss_pred             HHHHHhh
Confidence            9998865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.03  E-value=1.3e-09  Score=69.12  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+.....  ....+.+..|+.++.. ..|||++++++.+...+..|+++||+++ +|.+++.+
T Consensus         8 ~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   86 (265)
T cd05579           8 RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ-AQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN   86 (265)
T ss_pred             EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHh-CCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHH
Confidence            478888888899999999975322  2345678889999887 4899999999999999999999999999 99998865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.03  E-value=3.2e-09  Score=68.79  Aligned_cols=69  Identities=12%  Similarity=0.157  Sum_probs=57.3

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..++..+|+|.+...........+.+|+.++.. ..|||++++++++...  ..++++|||++| +|.+++.+
T Consensus        30 ~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~  101 (284)
T cd05079          30 DNTGEQVAVKSLKPESGGNHIADLKKEIEILRN-LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR  101 (284)
T ss_pred             CCccceEEEEEcCccccHHHHHHHHHHHHHHHh-CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHh
Confidence            457888999998755444456778999999888 5999999999988775  579999999999 99998854

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.03  E-value=3.8e-09  Score=70.19  Aligned_cols=76  Identities=11%  Similarity=0.040  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...  ........+..|..++.. .+||||+.+++++..++.+|++|||+++ +|.+++.+
T Consensus        16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~   94 (332)
T cd05623          16 EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSK   94 (332)
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhh-CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHH
Confidence            4677888889999999999642  122234457778888776 5999999999999999999999999999 99999865

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.03  E-value=3.9e-09  Score=66.86  Aligned_cols=76  Identities=18%  Similarity=0.171  Sum_probs=62.9

Q ss_pred             cceeEEEccCC----CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDP----DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~----~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .++++....++    ..+|+|.+...........+..|+.++..+ +||||+++++.+...+..+++|||+++ +|.+++
T Consensus        14 ~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~   92 (258)
T smart00219       14 EVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYL   92 (258)
T ss_pred             ceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEEeccCCCCHHHHH
Confidence            35566665555    889999997655444577889999998885 999999999999999999999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        93 ~~   94 (258)
T smart00219       93 RK   94 (258)
T ss_pred             Hh
Confidence            64

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG4278|consensus

Probab=99.03  E-value=2.2e-10  Score=82.39  Aligned_cols=75  Identities=16%  Similarity=0.126  Sum_probs=61.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhcC
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKVD   89 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~~   89 (89)
                      ||.++.+.-.-.+|||.+..  +.-+.+.|+.|.++|.. +.|||+|+++|+|..+..+|||+|||.+ +|.++|+.++
T Consensus       283 VYeGvWKkyslTvAVKtLKE--DtMeveEFLkEAAvMKe-ikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecn  358 (1157)
T KOG4278|consen  283 VYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECN  358 (1157)
T ss_pred             eeeeeeeccceeeehhhhhh--cchhHHHHHHHHHHHHh-hcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhc
Confidence            34444444555688888864  34458899999999766 6999999999999999999999999999 9999998764

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.02  E-value=3.1e-09  Score=68.68  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=58.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-----CCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-----EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++....++..+|+|.+.....  ....+..|+.++..+.+||||+++++++..     ++..+++|||+++ +|.++
T Consensus        33 ~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~  110 (286)
T cd06638          33 KVFKVLNKKNGSKAAVKILDPIHD--IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDL  110 (286)
T ss_pred             EEEEEEECCCCceeEEEeeccccc--hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHH
Confidence            567888888999999998864322  234567788888875589999999998853     4579999999999 99887


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus       111 l~  112 (286)
T cd06638         111 VK  112 (286)
T ss_pred             HH
Confidence            64

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.02  E-value=6.6e-09  Score=66.62  Aligned_cols=75  Identities=15%  Similarity=0.283  Sum_probs=61.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~-sL~~   83 (89)
                      .|+++....+++.+|+|.+.....  ....+..|+.++....+|||++++++.+...      +.+|++|||+++ +|.+
T Consensus        21 ~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~   98 (272)
T cd06637          21 QVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD   98 (272)
T ss_pred             EEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHH
Confidence            467788888999999999975432  2456778999988765899999999998763      468999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus        99 ~l~~  102 (272)
T cd06637          99 LIKN  102 (272)
T ss_pred             HHHh
Confidence            8764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.02  E-value=4.9e-09  Score=67.06  Aligned_cols=76  Identities=12%  Similarity=0.159  Sum_probs=61.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH--------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT--------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~--------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL   81 (89)
                      .++.|....++..+|+|.+......        ...+.+.+|+.++.. ++||||+++++.+...+..++++||+++ +|
T Consensus        15 ~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   93 (267)
T cd06628          15 SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKE-LQHENIVQYLGSSLDADHLNIFLEYVPGGSV   93 (267)
T ss_pred             EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCccEEEEEecCCCCH
Confidence            3567777778899999988643211        123567889999888 4999999999999999999999999999 99


Q ss_pred             HHHHhh
Q psy13291         82 DKFYTK   87 (89)
Q Consensus        82 ~~~l~~   87 (89)
                      .++++.
T Consensus        94 ~~~l~~   99 (267)
T cd06628          94 AALLNN   99 (267)
T ss_pred             HHHHHh
Confidence            998865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.02  E-value=5.4e-09  Score=68.43  Aligned_cols=75  Identities=11%  Similarity=0.171  Sum_probs=62.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....+|+.+|+|.+...... ..+.+.+|+.++.. ++|||++++++.+...+.+|+++||+++ +|.+++..
T Consensus        34 ~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  109 (296)
T cd06655          34 TVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKE-LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE  109 (296)
T ss_pred             EEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHh-cCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh
Confidence            3566777789999999999754322 35667889999877 5999999999999999999999999999 99988764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0660|consensus

Probab=99.02  E-value=1.2e-09  Score=73.36  Aligned_cols=76  Identities=16%  Similarity=0.167  Sum_probs=64.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-----CCEEEEEecchhccHHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-----EGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~sL~~~l   85 (89)
                      |+.+....+|..||+|.|.... .....++.++|+.+|..+ .|+||+.+++.+..     -+.+|+++|+|+.+|..++
T Consensus        38 VcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~ii  116 (359)
T KOG0660|consen   38 VCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQII  116 (359)
T ss_pred             EEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeecccccccccceeEEehhHHhhHHHHHH
Confidence            6778889999999999997542 334678899999999885 79999999999977     2489999999988999999


Q ss_pred             hhc
Q psy13291         86 TKV   88 (89)
Q Consensus        86 ~~~   88 (89)
                      +..
T Consensus       117 k~~  119 (359)
T KOG0660|consen  117 KSQ  119 (359)
T ss_pred             HcC
Confidence            864

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.02  E-value=3.9e-09  Score=79.09  Aligned_cols=76  Identities=14%  Similarity=0.234  Sum_probs=63.7

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.+..++..+|+|.+... ........+..|+.+|.. +.||||+++++.|...  ..+||+|||+++ +|.++|.
T Consensus        28 tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~-L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~  106 (1021)
T PTZ00266         28 EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRE-LKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQ  106 (1021)
T ss_pred             EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHH-cCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHH
Confidence            4788888899999999999754 334456778999999888 5999999999998664  579999999999 9998886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       107 k  107 (1021)
T PTZ00266        107 K  107 (1021)
T ss_pred             H
Confidence            4

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.01  E-value=6.3e-09  Score=75.37  Aligned_cols=76  Identities=14%  Similarity=0.159  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+++.||+|++...  ........+..|+.++.. +.||||+++++++...+.+|++|||+.| +|.+++..
T Consensus        19 ~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~   97 (669)
T cd05610          19 KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALAL-SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI   97 (669)
T ss_pred             EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHh-cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh
Confidence            5788888889999999999753  233445678889999876 5999999999999999999999999999 99998864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.01  E-value=8.6e-09  Score=66.65  Aligned_cols=75  Identities=17%  Similarity=0.253  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+... .....+.+..|+.++.. .+|||++++++.+..++..|+++||+++ +|..++.+
T Consensus        20 ~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~-l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   95 (282)
T cd06643          20 KVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILAS-CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE   95 (282)
T ss_pred             EEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHH-CCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence            4677888888999999998643 33446778889999887 5999999999999999999999999999 99887643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.01  E-value=4.3e-09  Score=66.79  Aligned_cols=73  Identities=16%  Similarity=0.331  Sum_probs=62.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+....   ..+.+.+|+.++..+ +|||++++++.+......|+++||+++ +|.+++..
T Consensus        18 ~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~   91 (256)
T cd06612          18 SVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI   91 (256)
T ss_pred             EEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh
Confidence            46777777888999999986432   267788999998875 999999999999999999999999999 99998854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.01  E-value=8.4e-09  Score=66.08  Aligned_cols=76  Identities=17%  Similarity=0.158  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~   83 (89)
                      .|+++....+|..+|+|.+....    .....+.+.+|+.++.. +.||||+++++++..+  ..++++|||+++ +|.+
T Consensus        17 ~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~   95 (265)
T cd06652          17 RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKN-LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKD   95 (265)
T ss_pred             EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHh-cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHH
Confidence            57788888899999999986421    12345678889999887 5999999999988764  578999999999 9998


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus        96 ~l~~   99 (265)
T cd06652          96 QLKS   99 (265)
T ss_pred             HHHH
Confidence            8754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.01  E-value=4.6e-09  Score=68.18  Aligned_cols=74  Identities=12%  Similarity=0.117  Sum_probs=58.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      .|+++....+|..+|+|.+...........+.+|+.++.. ++||||+++++++..++..|+++||+++++.+.+
T Consensus        20 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~   93 (291)
T cd07870          20 TVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG-LKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYM   93 (291)
T ss_pred             EEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHh-cCCCCEeEEEEEEecCCeEEEEEecccCCHHHHH
Confidence            4677888889999999999754333223456789999887 5999999999999999999999999987544443

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.01  E-value=3.2e-09  Score=68.05  Aligned_cols=74  Identities=18%  Similarity=0.146  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+...  ......+.+|+.++.. ..|||++++++.+..++.++++|||+++ +|.+++..
T Consensus        21 ~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (263)
T cd05052          21 EVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE   95 (263)
T ss_pred             eEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHh-CCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHh
Confidence            4667777788999999988643  2235678899999888 5999999999999999999999999999 99998854

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.01  E-value=5.4e-09  Score=68.55  Aligned_cols=67  Identities=9%  Similarity=0.233  Sum_probs=56.3

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +..+|+|.+...........+..|+.++..+.+||||+++++++...+..|++|||+++ +|.+++..
T Consensus        50 ~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~  117 (307)
T cd05098          50 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA  117 (307)
T ss_pred             cceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            35699999875444444667888999988865899999999999999999999999999 99999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.00  E-value=5.6e-09  Score=68.32  Aligned_cols=75  Identities=13%  Similarity=0.256  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+.... ......+.+|+.++.. ++|||++++++.+..++..|++|||+++ +|.+++..
T Consensus        35 ~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  110 (292)
T cd06657          35 IVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRD-YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH  110 (292)
T ss_pred             EEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHh-cCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc
Confidence            56777888899999999986432 2345678889999877 5999999999999999999999999999 99988743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.00  E-value=5.9e-09  Score=67.21  Aligned_cols=76  Identities=11%  Similarity=0.031  Sum_probs=61.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+..... ....+.+..|+.++.. ..|||++++++++.....++++|||+++ +|+.++..
T Consensus        16 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   93 (286)
T cd07847          16 VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQ-LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN   93 (286)
T ss_pred             EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHh-CCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC
Confidence            467777888899999999875432 2223557789999887 5999999999999999999999999999 88887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.00  E-value=3.5e-09  Score=69.02  Aligned_cols=67  Identities=13%  Similarity=0.244  Sum_probs=56.7

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+.........+++.+|+.++.. ++||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        45 ~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (296)
T cd05095          45 QPVLVAVKMLREDANKNARNDFLKEIKIMSR-LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSR  112 (296)
T ss_pred             ceeEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHh
Confidence            4457899998755444456788999999887 4999999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.00  E-value=6.6e-09  Score=67.57  Aligned_cols=75  Identities=11%  Similarity=0.035  Sum_probs=61.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+|+.+|+|.+....  .......+.+|+.+|.. ++|||++.+++++..++..+++|||+++ +|.+++.
T Consensus        15 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   92 (285)
T cd05632          15 EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEK-VNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIY   92 (285)
T ss_pred             EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHH-cCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHH
Confidence            46778888899999999997532  12234557789999887 5999999999999999999999999999 9987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.00  E-value=4.9e-09  Score=67.39  Aligned_cols=67  Identities=15%  Similarity=0.271  Sum_probs=56.2

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+...........+.+|+.++.. .+||||+++++++...+..+++|||+++ +|.+++..
T Consensus        35 ~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~  102 (277)
T cd05032          35 PETRVAIKTVNENASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRS  102 (277)
T ss_pred             cceeEEEEecCCccCHHHHHHHHHHHHHHHh-CCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHh
Confidence            3477999998755444455678899999887 5999999999999999999999999998 99998854

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.99  E-value=5.3e-09  Score=67.95  Aligned_cols=66  Identities=15%  Similarity=0.279  Sum_probs=54.5

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +..+|+|.+...........+.+|+.++.. .+||||+++++.+..++..+++|||+++ +|.++++.
T Consensus        36 ~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  102 (288)
T cd05061          36 ETRVAVKTVNESASLRERIEFLNEASVMKG-FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS  102 (288)
T ss_pred             ceEEEEEECCCcCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHH
Confidence            457999988654433445567889999877 5999999999999999999999999999 99999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG4250|consensus

Probab=98.99  E-value=1.8e-10  Score=82.73  Aligned_cols=75  Identities=12%  Similarity=0.049  Sum_probs=62.2

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE------CCEEEEEecchhc-cHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR------EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~------~~~~~iv~E~~~~-sL~~~   84 (89)
                      |+.+.++.||+.+|||.+.........+.-.+|+++|.++ +|||||++++.=..      .....++||||.| ||..+
T Consensus        29 V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~  107 (732)
T KOG4250|consen   29 VYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKV  107 (732)
T ss_pred             eeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccceEEEeecCCCcHHHH
Confidence            6778889999999999998765555577788999999985 79999999876543      3467899999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +++
T Consensus       108 L~~  110 (732)
T KOG4250|consen  108 LNS  110 (732)
T ss_pred             hcC
Confidence            864

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.99  E-value=9.1e-09  Score=65.30  Aligned_cols=76  Identities=16%  Similarity=0.270  Sum_probs=62.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .++++.+..+|..+|+|.+... ......+.+..|+.++.. .+|||++++++.+..  ....|++|||+++ +|.+++.
T Consensus        15 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~   93 (265)
T cd08217          15 TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRE-LKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQ   93 (265)
T ss_pred             EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHh-cCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHH
Confidence            4677888889999999999754 334456778899999887 599999999998764  4578999999999 9998886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        94 ~   94 (265)
T cd08217          94 K   94 (265)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.99  E-value=6.4e-09  Score=67.54  Aligned_cols=65  Identities=18%  Similarity=0.355  Sum_probs=55.7

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+|+|.+.........+.+.+|+.++.. +.||||+++++.+...+..++++||+++ +|.+++..
T Consensus        31 ~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   96 (290)
T cd05045          31 TTVAVKMLKENASSSELRDLLSEFNLLKQ-VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRE   96 (290)
T ss_pred             eeEEEEecCCCCCHHHHHHHHHHHHHHhh-CCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHh
Confidence            56888888765555556788999999887 5999999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.99  E-value=3e-09  Score=67.52  Aligned_cols=76  Identities=21%  Similarity=0.256  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....+|..+|+|.+.... +....+.+.+|+.++.. .+|||++++++.+...+..|+++||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (257)
T cd08225          15 KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK-MKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINR   92 (257)
T ss_pred             eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHh-CCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHh
Confidence            46777888889999999997532 22345667889999887 5999999999999999999999999999 99888754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.99  E-value=1.3e-08  Score=67.19  Aligned_cols=74  Identities=11%  Similarity=0.252  Sum_probs=59.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      .++++....+|..+|+|.+....  .......+..|++++.. .+|||++++++++...+..|++|||++|++.+++
T Consensus        40 ~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~  115 (317)
T cd06635          40 AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQR-IKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLL  115 (317)
T ss_pred             EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHh-CCCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHH
Confidence            35677777789999999997532  23345678899999887 5999999999999999999999999998555554

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0592|consensus

Probab=98.99  E-value=6.7e-10  Score=78.08  Aligned_cols=78  Identities=12%  Similarity=0.063  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|.+|....++..||||+++...  ......=+.+|-..|..+.+||.|+++|.+|+++..+|.++||+++ +|-++|++
T Consensus        88 tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K  167 (604)
T KOG0592|consen   88 TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKK  167 (604)
T ss_pred             eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHH
Confidence            47888899999999999997531  1122333567788888867999999999999999999999999999 99999876


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      .
T Consensus       168 ~  168 (604)
T KOG0592|consen  168 Y  168 (604)
T ss_pred             h
Confidence            4

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.99  E-value=7.5e-09  Score=68.59  Aligned_cols=76  Identities=7%  Similarity=-0.053  Sum_probs=60.1

Q ss_pred             ceeEEE---ccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         12 PELGLA---RLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~---~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      |+++..   ..+|..+|+|.+....   .....+.+..|+.++..+.+||||+.+++++..++.+|++|||+++ +|.++
T Consensus        16 Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~   95 (332)
T cd05614          16 VFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTH   95 (332)
T ss_pred             EEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHH
Confidence            555554   3578999999997531   2233556788999998866899999999999999999999999999 99887


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        96 l~~   98 (332)
T cd05614          96 LYQ   98 (332)
T ss_pred             HHH
Confidence            754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.99  E-value=1e-08  Score=65.77  Aligned_cols=76  Identities=9%  Similarity=0.176  Sum_probs=60.4

Q ss_pred             cceeEEEcc-CCCEEEEEEEeec---------CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-
Q psy13291         11 KPELGLARL-DPDSEWSFRITFT---------VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-   79 (89)
Q Consensus        11 ~~~l~~~~~-~~~~~AvK~i~~~---------~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-   79 (89)
                      .++.+.... ++..+|+|.+...         .......++..|+.++....+|||++++++.+...+..|++|||+++ 
T Consensus        15 ~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   94 (269)
T cd08528          15 CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGA   94 (269)
T ss_pred             eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCC
Confidence            356666666 6788999998642         12234566788999887767999999999999999999999999999 


Q ss_pred             cHHHHHh
Q psy13291         80 SLDKFYT   86 (89)
Q Consensus        80 sL~~~l~   86 (89)
                      +|.+++.
T Consensus        95 ~l~~~l~  101 (269)
T cd08528          95 PLGEHFN  101 (269)
T ss_pred             cHHHHHH
Confidence            9988874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.99  E-value=3.5e-09  Score=69.36  Aligned_cols=75  Identities=12%  Similarity=0.216  Sum_probs=61.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+..... ...+.+.+|+.++.. ++|||++++++.+..++..|+++||+++ +|..++..
T Consensus        36 ~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~  111 (297)
T cd06659          36 IVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRD-YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ  111 (297)
T ss_pred             eEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHh-CCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh
Confidence            356777778899999999975432 235567889999877 5999999999999999999999999999 99887753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.99  E-value=6.1e-09  Score=67.27  Aligned_cols=75  Identities=15%  Similarity=0.291  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE------CCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR------EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~------~~~~~iv~E~~~~-sL~~   83 (89)
                      .++++.+..++..+|+|.+...  ......+..|+.++....+|||++++++++..      .+.+|++|||+++ +|.+
T Consensus        31 ~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~  108 (282)
T cd06636          31 QVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTD  108 (282)
T ss_pred             EEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHH
Confidence            4677888889999999998653  22345677899988886689999999999864      4589999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       109 ~~~~  112 (282)
T cd06636         109 LVKN  112 (282)
T ss_pred             HHHH
Confidence            8864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.99  E-value=1.7e-09  Score=68.92  Aligned_cols=76  Identities=9%  Similarity=0.067  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+....  .....+.+.+|++++.+ .+||||+++++++..++..++++||+.+ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   93 (258)
T cd05578          15 KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQE-LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ   93 (258)
T ss_pred             eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHh-CCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh
Confidence            46778877889999999997532  22346778899999887 5999999999999999999999999999 99988864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.98  E-value=9.6e-09  Score=66.20  Aligned_cols=75  Identities=9%  Similarity=0.034  Sum_probs=62.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+++|....+|..+|+|.+..... ......+..|+.++... +|||++++++.+..++.+++++||+ + +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~   91 (286)
T cd07832          15 IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRD   91 (286)
T ss_pred             EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHh
Confidence            366777778899999999976432 33456788999998874 8999999999999999999999999 7 99988754

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.98  E-value=5.5e-09  Score=68.26  Aligned_cols=75  Identities=9%  Similarity=0.215  Sum_probs=61.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+...... ..+.+..|+.++.. .+|||++++++++...+..|+++||+++ +|.+++.+
T Consensus        34 ~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  109 (293)
T cd06647          34 TVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRE-NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  109 (293)
T ss_pred             EEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhh-cCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence            4566777778899999998643222 35668889999877 5899999999999999999999999999 99988764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.98  E-value=1e-08  Score=65.61  Aligned_cols=74  Identities=16%  Similarity=0.253  Sum_probs=59.6

Q ss_pred             ceeEEEccCCCEEEEEEEeecCC-----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVN-----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~-----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+++.. .+|..+|+|.+.....     ......+.+|+++|..+ +||||+++++++...+..++++||+++ +|.+++
T Consensus        16 v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   93 (265)
T cd06631          16 VYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSIL   93 (265)
T ss_pred             EEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHH
Confidence            455543 4788999999875321     12345688999998884 999999999999999999999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      .+
T Consensus        94 ~~   95 (265)
T cd06631          94 NR   95 (265)
T ss_pred             Hh
Confidence            65

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.97  E-value=1e-08  Score=65.35  Aligned_cols=76  Identities=16%  Similarity=0.198  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+..... ....+.+..|+.++.. .+||||+++++.+...+.+++++||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (264)
T cd06626          15 KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLEL-LKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH   92 (264)
T ss_pred             EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHh-CCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh
Confidence            456677777899999999976533 2457788999999887 5999999999999999999999999999 99998865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.97  E-value=9.7e-09  Score=65.81  Aligned_cols=74  Identities=14%  Similarity=0.153  Sum_probs=57.3

Q ss_pred             ceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++..+  ..+..+|+|.+.........+.+.+|+.++.. ++||||+++++.+. .+..|++|||+++ +|.+++..
T Consensus        11 v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~-l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~   87 (257)
T cd05115          11 VKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQ-LDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSG   87 (257)
T ss_pred             EEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHh-cCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHh
Confidence            4555443  34557999999765444456778899999887 59999999999874 4578999999999 99998853

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.97  E-value=7.2e-09  Score=67.35  Aligned_cols=75  Identities=11%  Similarity=0.154  Sum_probs=59.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++++....+|+.+|+|.+..... ......+..|+.++.. ++|||++++++++...+..|++|||+++++.+.+.
T Consensus        17 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~   92 (294)
T PLN00009         17 VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKE-MQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMD   92 (294)
T ss_pred             EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHh-ccCCCEeeEEEEEecCCeEEEEEecccccHHHHHH
Confidence            567788888999999999865322 2234567789999888 49999999999999999999999999876555543

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.97  E-value=1.2e-08  Score=66.27  Aligned_cols=75  Identities=13%  Similarity=0.258  Sum_probs=61.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+.... ....+.+.+|+.++.. .+|||++++++++...+..++++||+++ +|.+++..
T Consensus        34 ~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~-~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  109 (285)
T cd06648          34 IVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRD-YQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH  109 (285)
T ss_pred             EEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHH-cCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence            35667777789999999986432 2235567889999877 5999999999999999999999999999 99988754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG4236|consensus

Probab=98.97  E-value=3.6e-09  Score=75.07  Aligned_cols=74  Identities=15%  Similarity=0.072  Sum_probs=63.0

Q ss_pred             ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      ||-+.+|.+|+.||||+|+.. .....-.++..|++||+. .+||.|+.+-..|...+.+|+|||=+.| -|+-+|.
T Consensus       580 VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~-l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILS  655 (888)
T KOG4236|consen  580 VYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQN-LHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILS  655 (888)
T ss_pred             eecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHh-cCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHH
Confidence            567789999999999999864 233334778999999998 5999999999999999999999999999 6777764

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.97  E-value=1.2e-08  Score=64.41  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+.... .......+..|++++.. .+|||++++.+.+...+..++++||+++ +|.++++.
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   92 (258)
T cd08215          15 KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKK-LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKK   92 (258)
T ss_pred             EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHh-cCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHH
Confidence            56777777789999999998643 23456778899999887 4899999999999999999999999999 99988865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.96  E-value=5.8e-09  Score=68.25  Aligned_cols=68  Identities=9%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+..+|+|.+.........+++.+|+.++..+.+||||+++++.+...+.+|++|||+++ +|.+++..
T Consensus        46 ~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  114 (304)
T cd05101          46 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA  114 (304)
T ss_pred             cceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            345789998875444455678899999987754899999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.96  E-value=3.9e-09  Score=68.99  Aligned_cols=75  Identities=13%  Similarity=0.259  Sum_probs=62.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+.... ....+.+.+|+.++.. .+|||++++++.+..++..|++|||+++ +|.+++..
T Consensus        37 ~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~-l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  112 (292)
T cd06658          37 IVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRD-YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH  112 (292)
T ss_pred             EEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHh-CCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc
Confidence            46677777889999999986432 2345668899999877 5999999999999999999999999999 99988743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.96  E-value=8.4e-09  Score=68.49  Aligned_cols=66  Identities=9%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+|+|.+.........+.+..|+.++.++.+||||+++++.+..++.+++++||+++ +|.+++.+
T Consensus        45 ~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  111 (334)
T cd05100          45 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRA  111 (334)
T ss_pred             eeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHh
Confidence            3689998875544555678899999988755899999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.96  E-value=7.7e-09  Score=65.45  Aligned_cols=76  Identities=14%  Similarity=0.197  Sum_probs=62.5

Q ss_pred             ceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++.+.....   +..+|+|.+.........+.+..|+.++..+ +|||++++++.+.....++++|||+++ +|.++++.
T Consensus        11 v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   89 (262)
T cd00192          11 VYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRK   89 (262)
T ss_pred             EEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEeccCCcHHHHHhh
Confidence            455555544   8889999998654444567888999998885 799999999999999999999999998 99999875


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      .
T Consensus        90 ~   90 (262)
T cd00192          90 S   90 (262)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.96  E-value=1.9e-08  Score=66.35  Aligned_cols=75  Identities=9%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++.+....+|..+|+|.+....  .....+.+..|+.++.. .+|||++++++++...+..|++|||+.+++.+++.
T Consensus        36 ~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~  112 (313)
T cd06633          36 AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQ-LKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLE  112 (313)
T ss_pred             EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHh-CCCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHH
Confidence            46777777899999999997532  22345678889999887 59999999999999999999999999886555553

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.96  E-value=6.7e-09  Score=67.72  Aligned_cols=77  Identities=34%  Similarity=0.521  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .++++....++..+|+|.+...........+..|+.++....+||||+++++++......|++|||+++++.+++..
T Consensus        30 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~  106 (296)
T cd06618          30 QVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKR  106 (296)
T ss_pred             EEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCcCHHHHHHH
Confidence            46777777789999999997654444456677788777776679999999999999999999999998766666543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.96  E-value=5.2e-09  Score=67.87  Aligned_cols=76  Identities=13%  Similarity=0.141  Sum_probs=59.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE-----EEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD-----VWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~-----~~iv~E~~~~sL~~~   84 (89)
                      .|+++....+|..+|+|.+...... .....+.+|+.++..+.+||||+++++++...+.     .|++|||++++|.++
T Consensus        16 ~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~   95 (295)
T cd07837          16 KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKF   95 (295)
T ss_pred             EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHH
Confidence            4778888889999999998754322 2245678899998886578999999999987665     899999999966665


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus        96 ~~   97 (295)
T cd07837          96 MD   97 (295)
T ss_pred             HH
Confidence            53

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.96  E-value=3.8e-09  Score=78.52  Aligned_cols=71  Identities=10%  Similarity=0.028  Sum_probs=57.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.+....+|..||+|.+......     ...|++.+.+ .+||||++++|++..++..|++||||++ +|.++++.
T Consensus       705 ~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~-l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  776 (968)
T PLN00113        705 ASYKGKSIKNGMQFVVKEINDVNSI-----PSSEIADMGK-LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN  776 (968)
T ss_pred             eEEEEEECCCCcEEEEEEccCCccc-----cHHHHHHHhh-CCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc
Confidence            4777877789999999998643221     1235777777 5999999999999999999999999999 99999864

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.95  E-value=1.3e-08  Score=66.09  Aligned_cols=76  Identities=8%  Similarity=0.098  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+.|....++..+|+|.+..... ......+.+|+.++..+ .||||+++++++...  +..|+++||++++|.+++..
T Consensus        20 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~   98 (293)
T cd07843          20 VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMET   98 (293)
T ss_pred             EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHh
Confidence            467788888899999999975422 22234567899998884 899999999999887  89999999998887777654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.95  E-value=8.5e-09  Score=66.91  Aligned_cols=67  Identities=16%  Similarity=0.231  Sum_probs=57.6

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+..+|+|.+.........+.+..|+.++.. ..|||++++++++...+..+++|||+++ +|.+++..
T Consensus        45 ~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (296)
T cd05051          45 APVLVAVKVLRPDASDNAREDFLKEVKILSR-LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQK  112 (296)
T ss_pred             CceeEEEEEecCccCHHHHHHHHHHHHHHHh-cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHh
Confidence            4467899999766555557788999999988 4999999999999999999999999999 99998865

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.95  E-value=9.4e-09  Score=65.47  Aligned_cols=71  Identities=15%  Similarity=0.180  Sum_probs=58.8

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+.+.  ..|+.+|+|.+.....  ..+.+..|+.++.. ..|||++++++.+...+..+++|||+++ +|.++++.
T Consensus        22 v~~~~--~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   93 (256)
T cd05039          22 VMLGD--YRGQKVAVKCLKDDST--AAQAFLAEASVMTT-LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRS   93 (256)
T ss_pred             EEEEE--ecCcEEEEEEeccchh--HHHHHHHHHHHHHh-cCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHh
Confidence            44443  4588999999975433  46778899999887 4999999999999999999999999998 99998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.95  E-value=1.2e-08  Score=65.54  Aligned_cols=68  Identities=13%  Similarity=0.205  Sum_probs=56.1

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++..+|+|.+.........+.+..|+.++.. ..||||+++++++..  ....+++|||+++ +|.+++..
T Consensus        31 ~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~  101 (284)
T cd05038          31 NTGEQVAVKSLNHSGEEQHRSDFEREIEILRT-LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQR  101 (284)
T ss_pred             CCceEEEEEEeccccchHHHHHHHHHHHHHHh-CCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHh
Confidence            35788999999765443346778999999887 599999999998877  5589999999999 99998865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.95  E-value=2e-09  Score=69.46  Aligned_cols=76  Identities=9%  Similarity=0.052  Sum_probs=62.3

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      ..|+++....+|..+|+|.+...... ...+.+.+|+.++.. .+||||+++++++..++..++++||+++ +++.+..
T Consensus        15 ~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~   92 (286)
T cd07846          15 GMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ-LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK   92 (286)
T ss_pred             eEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh-cCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHh
Confidence            35788888888999999988653222 234567789999887 5999999999999999999999999999 8887764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.94  E-value=8.3e-09  Score=66.34  Aligned_cols=67  Identities=13%  Similarity=0.177  Sum_probs=55.8

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +...+|+|.+.........+.+.+|+.++.. ++|||++++++.+...+..|++|||+++ +|.+++..
T Consensus        34 ~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~  101 (275)
T cd05046          34 GETLVLVKALQKTKDENLQSEFRRELDMFRK-LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRA  101 (275)
T ss_pred             CcceEEEEccCCccchHHHHHHHHHHHHHHh-cCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHh
Confidence            3467899988654444356778999999988 4999999999999888999999999998 99998864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.94  E-value=8.7e-09  Score=67.28  Aligned_cols=77  Identities=14%  Similarity=0.200  Sum_probs=60.9

Q ss_pred             cceeEEEccCCC--EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPD--SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~--~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.+....++.  .+|+|.+.........+.+.+|+.++.++.+||||+++++++...+.+|+++||+++ +|.+++..
T Consensus        17 ~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   96 (297)
T cd05089          17 QVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRK   96 (297)
T ss_pred             eEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHh
Confidence            355666555554  468888874444445677889999988865899999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.94  E-value=4.1e-09  Score=68.05  Aligned_cols=75  Identities=11%  Similarity=0.198  Sum_probs=60.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++++....+|..+|+|.+..... ......+..|++++.. ++||||+++++++...+..+++|||++++|.+++.
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~   90 (284)
T cd07860          15 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD   90 (284)
T ss_pred             EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHh-cCCCCCcchhhhcccCCcEEEEeeccccCHHHHHH
Confidence            467788888999999999875332 2234568889999888 49999999999999999999999999777766654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.94  E-value=5.8e-09  Score=67.29  Aligned_cols=76  Identities=11%  Similarity=0.103  Sum_probs=62.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+.... +....+.+.+|++++.. +.||||+++++.+...+..++++||+++ +++.+.++
T Consensus        16 ~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~   93 (288)
T cd07833          16 VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQ-LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEAS   93 (288)
T ss_pred             eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHh-cCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhc
Confidence            46788888899999999987532 23345678899999887 4899999999999999999999999999 77766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.93  E-value=1.7e-08  Score=65.28  Aligned_cols=69  Identities=13%  Similarity=0.109  Sum_probs=55.5

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..++..+|+|.+...........+.+|+.+|.. ++||||+++++++...  ..++++|||+++ +|.+++..
T Consensus        30 ~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  101 (283)
T cd05080          30 DGTGEMVAVKTLKRECGQQNTSGWKKEINILKT-LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK  101 (283)
T ss_pred             CCCCceEEEEEeccccChHHHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH
Confidence            346788999999765444445678889999888 5999999999987664  468999999999 99988764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.93  E-value=7.1e-09  Score=66.11  Aligned_cols=74  Identities=15%  Similarity=0.091  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.... +..+|+|.+..... ...+.+..|+.++.. ++||||+++++.+...+..+++|||+++ +|.++++.
T Consensus        21 ~vy~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (261)
T cd05148          21 EVWEGLWKN-RVRVAIKILKSDDL-LKQQDFQKEVQALKR-LRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRS   95 (261)
T ss_pred             cEEEeEecC-CCcEEEEeccccch-hhHHHHHHHHHHHhc-CCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhc
Confidence            466777666 78899999875432 235668889999877 5999999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=3e-08  Score=62.68  Aligned_cols=76  Identities=17%  Similarity=0.228  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+..... ....+.+..|+.++.++ .|||++++++.+..++.+++++||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (254)
T cd06627          15 VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK   92 (254)
T ss_pred             EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHh
Confidence            467777788899999999976432 24567889999998884 999999999999999999999999999 99998764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.93  E-value=8.2e-09  Score=66.85  Aligned_cols=64  Identities=11%  Similarity=0.035  Sum_probs=52.1

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+|+|.+.... ......+..|..++.. .+||||+++++++..++..|++|||+++ +|+.++++
T Consensus        45 ~~v~~k~~~~~~-~~~~~~~~~~~~~~~~-l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~  109 (274)
T cd05076          45 LRVVLKVLDPSH-RDIALAFFETASLMSQ-VSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK  109 (274)
T ss_pred             eeEEEEecChHH-HHHHHHHHHHHHHHhc-CCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence            458888886432 2234567788888766 5999999999999999999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.93  E-value=2.7e-08  Score=62.44  Aligned_cols=75  Identities=15%  Similarity=0.351  Sum_probs=63.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....+|..+++|.+..... .....+.+|+.++.. ..|||++++++.+...+..++++||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   90 (253)
T cd05122          15 EVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKK-CKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS   90 (253)
T ss_pred             EEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhh
Confidence            456777777899999999975433 346778899999887 4899999999999999999999999998 99998865

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.92  E-value=7.7e-09  Score=69.11  Aligned_cols=69  Identities=17%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+++.+|+|.+.........+.+..|+.++.++.+||||+++++++... +.++++|||+++ +|.+++..
T Consensus        35 ~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          35 ASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             cccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHh
Confidence            3567899999975544445677889999988865899999999988654 579999999999 99998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.92  E-value=1.5e-08  Score=64.72  Aligned_cols=73  Identities=18%  Similarity=0.224  Sum_probs=57.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... ++..+|+|.+......  ...+..|+.++.. .+||||+++++.+...+..+++|||+++ +|.+++..
T Consensus        19 ~v~~~~~~-~~~~~~iK~~~~~~~~--~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   92 (256)
T cd05059          19 VVHLGKWR-GKIDVAIKMIREGAMS--EDDFIEEAKVMMK-LSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRE   92 (256)
T ss_pred             eEEEeEec-CCccEEEEEeccCCCC--HHHHHHHHHHHHh-CCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHh
Confidence            45666554 4567899988643221  3457789999887 5999999999999999999999999999 99988864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.92  E-value=2.8e-09  Score=68.82  Aligned_cols=75  Identities=12%  Similarity=0.159  Sum_probs=60.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|+++....+|..+|+|.+...... .....+..|+.++.. .+|||++++++++...+.+|+++||++++|.+++.
T Consensus        15 ~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~   90 (284)
T cd07839          15 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFD   90 (284)
T ss_pred             EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHh-cCCCCeeeHHHHhccCCceEEEEecCCCCHHHHHH
Confidence            5788888889999999999753222 223456789999887 59999999999999999999999999986666554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.92  E-value=2.4e-08  Score=64.81  Aligned_cols=74  Identities=15%  Similarity=0.302  Sum_probs=59.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~-sL~~~   84 (89)
                      .++++....++..+|+|.+.....  ....+..|+.++..+.+|||++++++++...     +..|++|||+++ +|.++
T Consensus        37 ~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~  114 (291)
T cd06639          37 KVYKVTNKKDGSLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTEL  114 (291)
T ss_pred             EEEEEEECCCCCEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHH
Confidence            467777778899999999864322  2455677888888765899999999998764     368999999999 99988


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      ++
T Consensus       115 ~~  116 (291)
T cd06639         115 VK  116 (291)
T ss_pred             HH
Confidence            75

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0576|consensus

Probab=98.92  E-value=4.3e-11  Score=85.77  Aligned_cols=72  Identities=15%  Similarity=0.333  Sum_probs=61.1

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+.+....++...|+|.++....+. ...+++|+-++.. ..||||+.|+|+|...+..||+||||.| +|+++.
T Consensus        31 vyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~d-c~h~nivay~gsylr~dklwicMEycgggslQdiy  103 (829)
T KOG0576|consen   31 VYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRD-CRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIY  103 (829)
T ss_pred             hhhhcccccCchhhheeeeccCCcc-ccccccceeeeec-CCCcChHHHHhhhhhhcCcEEEEEecCCCccccee
Confidence            4567777899999999999866553 6667778877655 6999999999999999999999999999 998875

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.92  E-value=1.6e-08  Score=64.52  Aligned_cols=72  Identities=18%  Similarity=0.247  Sum_probs=56.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++... ++..+|+|.+.....  ....+..|+.+|.. .+||||+++++++...+..|++|||+++ +|.+++..
T Consensus        20 vy~~~~~-~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~   92 (256)
T cd05114          20 VHLGKWR-AQIKVAIKAINEGAM--SEEDFIEEAKVMMK-LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQ   92 (256)
T ss_pred             EEEEEec-cCceEEEEecccCCc--cHHHHHHHHHHHHH-CCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHh
Confidence            4555443 345789998764322  24567889999887 5999999999999999999999999998 99988864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.92  E-value=3.9e-09  Score=67.60  Aligned_cols=65  Identities=17%  Similarity=0.218  Sum_probs=54.5

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+|+|.+...........+.+|+.++.. .+||||+++++++...+..+++|||+++ +|.+++..
T Consensus        27 ~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~   92 (269)
T cd05044          27 IRVAVKTLRKGATDQEKKEFLKEAHLMSN-FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRD   92 (269)
T ss_pred             eeehhhhhhcccchhhHHHHHHHHHHHHh-cCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHH
Confidence            67899988654433446678899999877 5999999999999999999999999999 99988864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.91  E-value=3.8e-08  Score=63.16  Aligned_cols=76  Identities=18%  Similarity=0.193  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~   83 (89)
                      .++++....+|..+|+|.+....    .......+.+|+.++.. ++||||+++++.+..  .+.+++++||+++ +|.+
T Consensus        17 ~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~   95 (266)
T cd06651          17 RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKN-LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKD   95 (266)
T ss_pred             EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHH-cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHH
Confidence            46788888899999999986432    12335678889999888 499999999998876  3678999999999 9998


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus        96 ~l~~   99 (266)
T cd06651          96 QLKA   99 (266)
T ss_pred             HHHH
Confidence            8764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.91  E-value=1.4e-08  Score=66.10  Aligned_cols=76  Identities=9%  Similarity=0.069  Sum_probs=61.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .++++....+|+.+|+|.+.....    ......+..|+.++.. .+||||+++++++..++..+++|||+.++|.+++.
T Consensus        15 ~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~   93 (298)
T cd07841          15 VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQE-LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIK   93 (298)
T ss_pred             EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhh-cCCCCChhhhheeecCCEEEEEEcccCCCHHHHHh
Confidence            467788888899999999975422    2234556789999887 58999999999999999999999999339999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        94 ~   94 (298)
T cd07841          94 D   94 (298)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.91  E-value=2.5e-08  Score=64.48  Aligned_cols=68  Identities=12%  Similarity=0.237  Sum_probs=54.9

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..++..+|+|.+... .....+.+.+|++++.. +.||||+++++++...  ..+++++||+++ +|.+++..
T Consensus        30 ~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  100 (284)
T cd05081          30 DNTGEVVAVKKLQHS-TAEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK  100 (284)
T ss_pred             CCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHh-CCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHh
Confidence            346889999998643 33446678899999888 5999999999987653  479999999999 99998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.91  E-value=1e-08  Score=69.06  Aligned_cols=75  Identities=12%  Similarity=0.087  Sum_probs=60.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~   84 (89)
                      .|+++....+|..+|+|.+.... +......+.+|+.+|.. ++||||+++++++..++     .+|+++||+.++|.++
T Consensus        15 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~   93 (372)
T cd07853          15 VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCF-FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKI   93 (372)
T ss_pred             EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHh-CCCCCcCCHhheecCCCccccceEEEEeeccccCHHHH
Confidence            47788888899999999997532 23345678899999887 59999999999998776     8999999998866665


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus        94 ~~   95 (372)
T cd07853          94 IV   95 (372)
T ss_pred             Hh
Confidence            53

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.90  E-value=4.4e-08  Score=61.72  Aligned_cols=77  Identities=18%  Similarity=0.219  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .++.+....++..+++|.+..... ....+.+.+|+.++.+ .+|||++++++.+...  +.+++++||+++ +|.+++.
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   93 (260)
T cd06606          15 SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS-LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLK   93 (260)
T ss_pred             EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHH-cCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHH
Confidence            467777778899999999976432 2456778899999888 5899999999999988  899999999998 9999886


Q ss_pred             hc
Q psy13291         87 KV   88 (89)
Q Consensus        87 ~~   88 (89)
                      ..
T Consensus        94 ~~   95 (260)
T cd06606          94 KF   95 (260)
T ss_pred             Hc
Confidence            53

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.90  E-value=2.9e-08  Score=64.08  Aligned_cols=75  Identities=13%  Similarity=0.154  Sum_probs=59.5

Q ss_pred             cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .++++....+|.    .+|+|.+...........+.+|+.++.. .+|||++++++++.. +..++++||+++ +|.+++
T Consensus        22 ~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l   99 (279)
T cd05057          22 TVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMAS-VDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYV   99 (279)
T ss_pred             cEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEec-CceEEEEecCCCCcHHHHH
Confidence            356666555554    5899988765445556778899999887 599999999998887 789999999999 999887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       100 ~~  101 (279)
T cd05057         100 RN  101 (279)
T ss_pred             Hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.90  E-value=2.1e-08  Score=67.20  Aligned_cols=74  Identities=15%  Similarity=0.158  Sum_probs=57.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~   83 (89)
                      .|+++....+|..+|+|.+.... .......+.+|+.++.. .+||||+++++++...+      .+|++|||+++++.+
T Consensus        36 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  114 (359)
T cd07876          36 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC-VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQ  114 (359)
T ss_pred             EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHh-CCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHH
Confidence            47788888899999999997532 33345677889999877 59999999999987543      589999999985544


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      .+
T Consensus       115 ~~  116 (359)
T cd07876         115 VI  116 (359)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.90  E-value=9.4e-09  Score=65.12  Aligned_cols=76  Identities=13%  Similarity=0.100  Sum_probs=63.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+.... .......+..|+.++..+ .||||+++++++...+..|+++||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (256)
T cd08530          15 SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISK   92 (256)
T ss_pred             eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHH
Confidence            46777778899999999997542 334466778899998874 899999999999999999999999999 99988765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.90  E-value=2.2e-08  Score=63.56  Aligned_cols=75  Identities=15%  Similarity=0.126  Sum_probs=63.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHH-HHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQ-EHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~-~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....++..+|+|.+....... .......|+.++.++ .||||+++++.+...+..+++|||+++ +|.+++.
T Consensus        14 ~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~   90 (260)
T PF00069_consen   14 TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ   90 (260)
T ss_dssp             EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-ccccccccccccccccccccccccccccccccccc
Confidence            57889999999999999998654332 233445699998885 999999999999999999999999999 9999886

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=4.3e-08  Score=62.81  Aligned_cols=75  Identities=16%  Similarity=0.154  Sum_probs=60.2

Q ss_pred             ceeEEEccCCCEEEEEEEeec----CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFT----VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~----~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~   84 (89)
                      ++++....+|..+|+|.+...    ........+.+|+.++.. ++||||+++++++...  +.+++++||+++ +|.++
T Consensus        18 v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~   96 (264)
T cd06653          18 VYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKN-LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQ   96 (264)
T ss_pred             EEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHH-cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHH
Confidence            567777889999999998642    122345678899999888 4999999999998764  468999999999 99988


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        97 ~~~   99 (264)
T cd06653          97 LKA   99 (264)
T ss_pred             HHH
Confidence            754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0667|consensus

Probab=98.89  E-value=1.4e-08  Score=72.27  Aligned_cols=76  Identities=9%  Similarity=0.037  Sum_probs=64.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-----CceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-----AHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-----pniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      |-.|....|++.||||+++..  .....+...|+.||..+..|     -|+|+++++|...++.|||+|+++.+|.++|+
T Consensus       202 Vvk~~d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLYellK  279 (586)
T KOG0667|consen  202 VVKAYDHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLYELLK  279 (586)
T ss_pred             eEEEEecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhhhHHHHHH
Confidence            456778899999999999754  44577788899999986423     49999999999999999999999999999998


Q ss_pred             hcC
Q psy13291         87 KVD   89 (89)
Q Consensus        87 ~~~   89 (89)
                      .++
T Consensus       280 ~n~  282 (586)
T KOG0667|consen  280 NNK  282 (586)
T ss_pred             hcC
Confidence            753

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.89  E-value=2.3e-08  Score=64.94  Aligned_cols=66  Identities=18%  Similarity=0.266  Sum_probs=54.8

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+... .......+.+|++++.. .+|||++++++++...+.+|+++||+++ +|.+++..
T Consensus        34 ~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~  100 (288)
T cd05093          34 DKILVAVKTLKDA-SDNARKDFHREAELLTN-LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRA  100 (288)
T ss_pred             cceEEEEEecCCc-CHHHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHH
Confidence            4456899988643 23446678899999888 4999999999999999999999999999 99988863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.89  E-value=1.8e-08  Score=64.90  Aligned_cols=65  Identities=11%  Similarity=0.125  Sum_probs=52.8

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+++|.+.........+.+.+|+.++.. ++||||+++++.+......+++|||+++ +|.+++++
T Consensus        23 ~~~~~k~~~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   88 (268)
T cd05086          23 ARVVVKELKANASSKEQNEFLQQGDPYRI-LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQ   88 (268)
T ss_pred             ceEEEEEecCCCChHHHHHHHHHHHHHhc-cCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHh
Confidence            34667766644444456788999988776 5999999999999999999999999999 99988864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0599|consensus

Probab=98.89  E-value=3.1e-09  Score=70.30  Aligned_cols=74  Identities=11%  Similarity=0.085  Sum_probs=61.3

Q ss_pred             eeEEEccCCCEEEEEEEeecCCH-------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         13 ELGLARLDPDSEWSFRITFTVNT-------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        13 ~l~~~~~~~~~~AvK~i~~~~~~-------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      ..|.++.+|..+|+|+|+.....       ...+.-.+|+.||.+..+||+||.+.++|.++..+++|+|+|+. .|-++
T Consensus        34 rRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDy  113 (411)
T KOG0599|consen   34 RRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDY  113 (411)
T ss_pred             hhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHH
Confidence            34567789999999999864321       23455678999999988999999999999999999999999998 87777


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      |.
T Consensus       114 Lt  115 (411)
T KOG0599|consen  114 LT  115 (411)
T ss_pred             hh
Confidence            74

>KOG0033|consensus

Probab=98.89  E-value=1.3e-10  Score=75.69  Aligned_cols=74  Identities=8%  Similarity=0.141  Sum_probs=60.1

Q ss_pred             ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-c-HHHHHh
Q psy13291         12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-S-LDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-s-L~~~l~   86 (89)
                      |+.+.++.||+.+|+|+|+.. ......+.+.+|+.|.. .+.||||+++.+++...+..|+++|+|+| + ..++.+
T Consensus        27 VrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~-~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~  103 (355)
T KOG0033|consen   27 VRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR-KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA  103 (355)
T ss_pred             HHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHH-hcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHH
Confidence            455778899999999999753 22335788999999954 47999999999999999999999999999 5 444443

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.89  E-value=1.8e-08  Score=66.79  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=60.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHH-------------HHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecch
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQ-------------EHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVM   77 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~-------------~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~   77 (89)
                      .|+++....+|..+|+|.+.......             ....+.+|+.++.. +.||||+++++++...+..+++|||+
T Consensus        24 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~  102 (335)
T PTZ00024         24 KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE-IKHENIMGLVDVYVEGDFINLVMDIM  102 (335)
T ss_pred             eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHh-CCCcceeeeeEEEecCCcEEEEEecc
Confidence            46788888899999999986532111             01246789999887 59999999999999999999999999


Q ss_pred             hccHHHHHhh
Q psy13291         78 DTSLDKFYTK   87 (89)
Q Consensus        78 ~~sL~~~l~~   87 (89)
                      +++|.+++..
T Consensus       103 ~~~l~~~l~~  112 (335)
T PTZ00024        103 ASDLKKVVDR  112 (335)
T ss_pred             ccCHHHHHHh
Confidence            8877777643

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.89  E-value=3.4e-08  Score=62.77  Aligned_cols=76  Identities=13%  Similarity=0.131  Sum_probs=61.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++++....++..+|+|.+... ......+.+..|+.++.. .+|||++.+++.+.. .+.++++|||+++ +|.+++..
T Consensus        15 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~   93 (257)
T cd08223          15 EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQ-LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE   93 (257)
T ss_pred             EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHh-CCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHH
Confidence            4677888888999999999753 233445678889999887 599999999988764 4478999999999 99888754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.89  E-value=9.2e-09  Score=65.28  Aligned_cols=70  Identities=10%  Similarity=0.012  Sum_probs=55.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.+..+|+.+|+|.+.....      ...|...+.. ..|||++++++.+...+.+|++|||++| +|.+++.+
T Consensus         8 ~v~~~~~~~~~~~~~~K~i~~~~~------~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           8 KVLLVMDTRTQQTFILKGLRKSSE------YSRERLTIIP-HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             eEEEEEEccCCcEEEEEeecchhh------hhhHHHHHHh-cCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            588999999999999999975321      1123333333 4799999999999999999999999999 99888754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.88  E-value=2e-08  Score=64.55  Aligned_cols=76  Identities=9%  Similarity=0.117  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+.... .......+..|+.++.. .+|||++++++.+...  +..++++||++++|.+++..
T Consensus        14 ~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~   92 (287)
T cd07840          14 QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQK-LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDS   92 (287)
T ss_pred             EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHh-ccCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhc
Confidence            46788888889999999998653 23345668889999887 4899999999999888  89999999998877776643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.88  E-value=2.5e-08  Score=64.69  Aligned_cols=76  Identities=7%  Similarity=-0.059  Sum_probs=59.4

Q ss_pred             ceeEEEc---cCCCEEEEEEEeecCC---HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         12 PELGLAR---LDPDSEWSFRITFTVN---TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~~---~~~~~~AvK~i~~~~~---~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      ++++...   .+|..+|+|.+.....   ....+.+..|+.++..+.+||||+.+++++..++.+++++||+++ +|.++
T Consensus        16 v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (290)
T cd05613          16 VFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTH   95 (290)
T ss_pred             EEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHH
Confidence            4455443   4789999999975321   123456778999988865899999999999999999999999999 99988


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        96 l~~   98 (290)
T cd05613          96 LSQ   98 (290)
T ss_pred             HHH
Confidence            754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.88  E-value=5e-08  Score=64.15  Aligned_cols=74  Identities=12%  Similarity=0.269  Sum_probs=59.6

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      .++++....++..+|+|.+...  ......+++..|+.++.. .+|||++++++++...+..|+++||+.|++.+++
T Consensus        30 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~  105 (308)
T cd06634          30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL  105 (308)
T ss_pred             EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHh-CCCCCcccEEEEEEcCCeeEEEEEccCCCHHHHH
Confidence            3567777788999999998743  233345678889999887 5999999999999999999999999988655554

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.88  E-value=2e-08  Score=64.22  Aligned_cols=72  Identities=17%  Similarity=0.222  Sum_probs=55.8

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++++... .+..+|+|.+.....  ..+.+.+|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        20 vy~~~~~-~~~~~aik~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~   92 (256)
T cd05113          20 VKYGKWR-GQYDVAIKMIKEGSM--SEDEFIEEAKVMMK-LSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLRE   92 (256)
T ss_pred             EEEEEec-CCCcEEEEEcCCCcc--cHHHHHHHHHHHhc-CCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHh
Confidence            4555432 234589998864322  24568889999887 5999999999999988999999999999 99998864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.87  E-value=7.2e-09  Score=66.42  Aligned_cols=78  Identities=10%  Similarity=0.121  Sum_probs=63.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....+|..+|+|++...  ........+..|..++..+.+||||+++++.+...+..+++|||+++ +|.+++++
T Consensus        16 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   95 (280)
T cd05581          16 TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK   95 (280)
T ss_pred             EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH
Confidence            4677778889999999998753  22334567888999988753399999999999999999999999988 99998865


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      .
T Consensus        96 ~   96 (280)
T cd05581          96 Y   96 (280)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.87  E-value=3e-08  Score=65.96  Aligned_cols=76  Identities=13%  Similarity=0.135  Sum_probs=60.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+.... .....+.+..|+.++.. ..|||++++++++.. .+.+++++||++++|.++++.
T Consensus        25 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~  102 (328)
T cd07856          25 LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKH-LRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTS  102 (328)
T ss_pred             EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHh-cCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhc
Confidence            57788888899999999986432 22335667789999887 599999999999876 467999999996688887754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.87  E-value=1.2e-08  Score=65.87  Aligned_cols=76  Identities=11%  Similarity=0.194  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .++.+....+|..+|+|.+...... .....+..|+.++.. .+|||++++++++..++..|+++||++++|.+++..
T Consensus        14 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~   90 (283)
T cd07835          14 VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKE-LNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDS   90 (283)
T ss_pred             EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHh-cCCCCccCHhheeccCCeEEEEEeccCcCHHHHHhh
Confidence            4677778889999999999754222 223567789999887 599999999999999999999999996688777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.87  E-value=2.1e-08  Score=68.47  Aligned_cols=68  Identities=9%  Similarity=-0.053  Sum_probs=57.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|....+++.+|+|...       ...+.+|+.+|.. ++||||++++++|...+..++++|++.++|..++.
T Consensus       107 ~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~  174 (391)
T PHA03212        107 FAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRA-INHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLA  174 (391)
T ss_pred             EEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHh-CCCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHH
Confidence            47889999999999999653       2346789999888 59999999999999999999999999877666554

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.86  E-value=5.5e-09  Score=66.85  Aligned_cols=75  Identities=16%  Similarity=0.123  Sum_probs=57.1

Q ss_pred             cceeEEEccCC-------CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDP-------DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~-------~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|+.+.....+       ..+|+|.+.... ....+.+..|+.++.. .+|||++.+++.+..++..+++|||+++ +|.
T Consensus        10 ~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~-~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~   87 (258)
T cd05078          10 KIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQ-LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLD   87 (258)
T ss_pred             hheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHh-CCCCChhheeeEEEeCCCcEEEEecCCCCcHH
Confidence            35555554433       348888876432 2345667888888777 5999999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      ++++.
T Consensus        88 ~~l~~   92 (258)
T cd05078          88 TYLKK   92 (258)
T ss_pred             HHHhc
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.86  E-value=2.5e-08  Score=63.68  Aligned_cols=73  Identities=16%  Similarity=0.196  Sum_probs=58.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.. ..+..+|+|.+...  ....+.+..|+.++.. .+||||+++++++...+..+++|||+++ +|.+++..
T Consensus        21 ~v~~~~~-~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   94 (261)
T cd05072          21 EVWMGYY-NNSTKVAVKTLKPG--TMSVQAFLEEANLMKT-LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKS   94 (261)
T ss_pred             eEEEEEe-cCCceEEEEEccCC--chhHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHH
Confidence            3566654 35567899987643  2235678889999887 5999999999999999999999999999 99998854

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.86  E-value=3e-08  Score=64.48  Aligned_cols=66  Identities=18%  Similarity=0.221  Sum_probs=53.8

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+++|.+.... ....+.+.+|+.++.. .+||||+++++.+..++..+++|||+++ +|.+++..
T Consensus        34 ~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~  100 (291)
T cd05094          34 DKMLVAVKALKDPT-LAARKDFQREAELLTN-LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA  100 (291)
T ss_pred             cceeeEEEecCCcc-HHHHHHHHHHHHHHhc-CCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHh
Confidence            44568888876432 2335678899999887 5999999999999999999999999999 99999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0594|consensus

Probab=98.86  E-value=2e-08  Score=67.21  Aligned_cols=77  Identities=10%  Similarity=0.169  Sum_probs=64.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCc-eeeEEeEEEECC------EEEEEecchhccHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAH-TVQFYGAMFREG------DVWICMEVMDTSLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpn-iv~~~~~~~~~~------~~~iv~E~~~~sL~   82 (89)
                      .|+.|....+|..||+|.+...... -......+|+.+|.. ++|+| |+.+++.+...+      .+++++||++.+|.
T Consensus        26 ~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~-L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~  104 (323)
T KOG0594|consen   26 VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKR-LSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLK  104 (323)
T ss_pred             EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHH-hCCCcceEEEEeeeeecccccccceEEEEEEeecccHH
Confidence            5889999999999999999865432 234567889999988 59999 999999998876      89999999999888


Q ss_pred             HHHhhc
Q psy13291         83 KFYTKV   88 (89)
Q Consensus        83 ~~l~~~   88 (89)
                      .++...
T Consensus       105 ~ymd~~  110 (323)
T KOG0594|consen  105 KYMDSL  110 (323)
T ss_pred             HHHHhc
Confidence            887653

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.86  E-value=3.2e-08  Score=62.96  Aligned_cols=74  Identities=14%  Similarity=0.078  Sum_probs=58.6

Q ss_pred             ceeEEEcc-CCC--EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARL-DPD--SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~-~~~--~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+.+.... .+.  .+|+|.+.........+.+..|+.++.. ++||||+++++.+.. ..+++++||+++ +|.+++..
T Consensus        11 v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~   88 (257)
T cd05040          11 VRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHS-LDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRK   88 (257)
T ss_pred             EEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhh-cCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHh
Confidence            45555433 333  5899999765443557788999999888 599999999999988 899999999998 99988764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.86  E-value=2.4e-08  Score=65.27  Aligned_cols=74  Identities=7%  Similarity=0.022  Sum_probs=57.9

Q ss_pred             cceeEEEcc--CCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHH
Q psy13291         11 KPELGLARL--DPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~--~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~   84 (89)
                      .|+++....  ++..+|+|.+....  .....+.+.+|+.++.. ++||||+++++.+...  +.+|++|||+++++.++
T Consensus        15 ~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~   93 (316)
T cd07842          15 RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE-LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQI   93 (316)
T ss_pred             EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHh-cCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHH
Confidence            356777766  78999999997632  12234567789999887 5999999999999988  78999999999855555


Q ss_pred             H
Q psy13291         85 Y   85 (89)
Q Consensus        85 l   85 (89)
                      +
T Consensus        94 ~   94 (316)
T cd07842          94 I   94 (316)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.85  E-value=3.5e-08  Score=63.67  Aligned_cols=72  Identities=10%  Similarity=-0.039  Sum_probs=54.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .|+++....++..+|+|.+....... .     |+.......+|||++++++++..++..|++|||+++ +|.++++..
T Consensus        31 ~v~~~~~~~~~~~~~~k~~~~~~~~~-~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~  103 (267)
T PHA03390         31 KVSVLKHKPTQKLFVQKIIKAKNFNA-I-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE  103 (267)
T ss_pred             EEEEEEEcCCCcEEEEEEEehhhcch-h-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc
Confidence            46788888899999999987532111 1     222222223799999999999999999999999999 999988653

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.85  E-value=3.2e-08  Score=63.26  Aligned_cols=73  Identities=18%  Similarity=0.190  Sum_probs=57.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... ++..+|+|.+.....  ..+.+..|+.++.. ++||||+++++++...+..|++|||+++ +|.++++.
T Consensus        21 ~v~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   94 (261)
T cd05068          21 EVWEGLWN-NTTPVAVKTLKPGTM--DPKDFLAEAQIMKK-LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQG   94 (261)
T ss_pred             cEEEEEec-CCeEEEEEeeCCCcc--cHHHHHHHHHHHHH-CCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhc
Confidence            45555543 456799999864322  24567889999888 4899999999999999999999999988 99998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.85  E-value=5.3e-08  Score=62.11  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=56.9

Q ss_pred             ceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |++|....++   ..+|+|.+.........+.+..|+.++.. ..|||++++++.+. .+..+++|||+++ +|.+++..
T Consensus        11 v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~   88 (257)
T cd05060          11 VVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQ-LDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKK   88 (257)
T ss_pred             EEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHh-cCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHh
Confidence            4455444433   78999999765443446678899999887 59999999999765 5578999999999 99998865

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.84  E-value=4.8e-08  Score=62.30  Aligned_cols=72  Identities=18%  Similarity=0.168  Sum_probs=57.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++... .+..+|+|.+.....  ...++..|+.++.. .+|||++++++++......+++|||+++ +|.+++..
T Consensus        22 v~~~~~~-~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~   94 (261)
T cd05034          22 VWMGTWN-GTTKVAVKTLKPGTM--SPEAFLQEAQIMKK-LRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKS   94 (261)
T ss_pred             EEEEEEc-CCceEEEEEecCCcc--CHHHHHHHHHHHhh-CCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhc
Confidence            5555543 456789998874322  24568889999887 5999999999999988999999999999 99988854

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.84  E-value=2e-08  Score=63.75  Aligned_cols=73  Identities=16%  Similarity=0.187  Sum_probs=55.9

Q ss_pred             cceeEEEccCC----------CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-
Q psy13291         11 KPELGLARLDP----------DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-   79 (89)
Q Consensus        11 ~~~l~~~~~~~----------~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-   79 (89)
                      .|+.+....++          ..+++|.+......  ...+.+|+.++.. .+||||+++++++.. +..+++|||+++ 
T Consensus        10 ~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~-l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   85 (259)
T cd05037          10 NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQ-LSHKHLVKLYGVCVR-DENIMVEEYVKFG   85 (259)
T ss_pred             eEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHc-CCCcchhheeeEEec-CCcEEEEEcCCCC
Confidence            35566665555          34778876543222  5677889999877 599999999999888 778999999999 


Q ss_pred             cHHHHHhh
Q psy13291         80 SLDKFYTK   87 (89)
Q Consensus        80 sL~~~l~~   87 (89)
                      +|+++++.
T Consensus        86 ~L~~~l~~   93 (259)
T cd05037          86 PLDVFLHR   93 (259)
T ss_pred             cHHHHHHh
Confidence            99998864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.83  E-value=3.9e-08  Score=63.51  Aligned_cols=75  Identities=11%  Similarity=0.043  Sum_probs=59.7

Q ss_pred             cceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++....     .+..+|+|.+.........+.+..|+.++.. ++||||+++++.+...+..++++||+++ +|.++
T Consensus        20 ~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~   98 (283)
T cd05091          20 KVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR-LQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEF   98 (283)
T ss_pred             eEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHH
Confidence            456665443     3578999999755444445678889988776 5999999999999999999999999999 99988


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus        99 l~  100 (283)
T cd05091          99 LV  100 (283)
T ss_pred             HH
Confidence            74

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.83  E-value=4.2e-08  Score=62.97  Aligned_cols=74  Identities=18%  Similarity=0.203  Sum_probs=56.5

Q ss_pred             ceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+.+.....   ...+|+|...........+.+.+|+.++.. .+||||+++++.+.. +..|++|||+++ +|.+++..
T Consensus        22 v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~   99 (270)
T cd05056          22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQ-FDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQV   99 (270)
T ss_pred             EEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHh-CCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHh
Confidence            445544332   346899988755445556788999999887 499999999998764 567899999999 99999864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.83  E-value=5.8e-08  Score=62.86  Aligned_cols=66  Identities=15%  Similarity=0.233  Sum_probs=55.3

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++..+|+|.+... .....+.+.+|+.++.. ++||||+++++++...+..|++|||+++ +|.+++..
T Consensus        34 ~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~  100 (280)
T cd05092          34 DKMLVAVKALKEA-SESARQDFQREAELLTV-LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRS  100 (280)
T ss_pred             CceEEEEEecCcC-CHHHHHHHHHHHHHHhc-CCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHh
Confidence            4567889988643 33456788999999887 5999999999999999999999999999 99998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.82  E-value=3.8e-08  Score=64.83  Aligned_cols=75  Identities=13%  Similarity=0.152  Sum_probs=57.9

Q ss_pred             cceeEEEccCCCE----EEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDS----EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~----~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++....+|..    +|+|.+.........+.+..|+.++.. +.||||++++|++... ..++++||+++ +|.+++
T Consensus        22 ~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l   99 (316)
T cd05108          22 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV   99 (316)
T ss_pred             eEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHH
Confidence            4566665555553    899998755444556778899999877 5999999999988764 57789999999 998887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       100 ~~  101 (316)
T cd05108         100 RE  101 (316)
T ss_pred             Hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.82  E-value=2.3e-08  Score=63.22  Aligned_cols=76  Identities=17%  Similarity=0.058  Sum_probs=62.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+.....  ......+..|+.++.. .+|||++++++.+..++.++++|||+++ +|.+++..
T Consensus         8 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~   86 (250)
T cd05123           8 KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSR-INHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK   86 (250)
T ss_pred             EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHH-cCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh
Confidence            466777777899999999975422  2245678889999877 5899999999999999999999999988 99888764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.82  E-value=4.2e-08  Score=64.31  Aligned_cols=76  Identities=7%  Similarity=0.072  Sum_probs=58.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++....+|+.+|+|.+...... .....+.+|+.++.. ++|||++++++++...  +.++++|||++++|.+++..
T Consensus        22 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~  100 (309)
T cd07845          22 IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLN-LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDN  100 (309)
T ss_pred             EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHh-CCCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHh
Confidence            4677888889999999999754222 122345679999887 5999999999998765  57999999998877776654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.81  E-value=8.9e-08  Score=62.06  Aligned_cols=76  Identities=11%  Similarity=-0.010  Sum_probs=55.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHH---HHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLD---ICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~---il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++....+++.+|+|.+......  ........|..   ++.. .+||||+.+++++...+..+++|||++| +|.++
T Consensus         9 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~   87 (278)
T cd05606           9 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYH   87 (278)
T ss_pred             EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh-CCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHH
Confidence            5778888889999999999753211  11112233333   3333 4899999999999999999999999999 99888


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        88 l~~   90 (278)
T cd05606          88 LSQ   90 (278)
T ss_pred             HHh
Confidence            754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.81  E-value=1.2e-07  Score=61.53  Aligned_cols=77  Identities=10%  Similarity=-0.001  Sum_probs=56.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHH--hcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICM--RSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~--~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++....+|..+|+|.+.....  .........|..++.  ...+|||++.+++.+..++..+++|||+++ +|.+++
T Consensus         9 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i   88 (279)
T cd05633           9 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHL   88 (279)
T ss_pred             EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHH
Confidence            467888888999999999975321  111222334443322  224799999999999999999999999999 998887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        89 ~~   90 (279)
T cd05633          89 SQ   90 (279)
T ss_pred             Hh
Confidence            54

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG4721|consensus

Probab=98.81  E-value=6e-09  Score=74.43  Aligned_cols=65  Identities=17%  Similarity=0.117  Sum_probs=51.7

Q ss_pred             EEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         15 GLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        15 ~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ...+..++.||||.+.....        .++.=|.+ +.|||||.|.|+|.....++|+||||.. -|..+|+..
T Consensus       141 F~Grl~netVAVKKV~elkE--------TdIKHLRk-LkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~  206 (904)
T KOG4721|consen  141 FLGRLHNETVAVKKVRELKE--------TDIKHLRK-LKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG  206 (904)
T ss_pred             eeeeccCceehhHHHhhhhh--------hhHHHHHh-ccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc
Confidence            34466788999998863211        13445566 5999999999999999999999999999 999999864

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.79  E-value=1.6e-08  Score=65.23  Aligned_cols=77  Identities=9%  Similarity=0.085  Sum_probs=59.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .++.|....++..+|+|.+.............+|+..+....+|||++++++.+..++..+++|||++++|.+++..
T Consensus        14 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~   90 (283)
T cd07830          14 SVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKD   90 (283)
T ss_pred             EEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHh
Confidence            36677777789999999987543322233455788888875349999999999999999999999995577776653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.79  E-value=5.6e-08  Score=65.01  Aligned_cols=74  Identities=15%  Similarity=0.167  Sum_probs=57.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|+++....++..+|+|.+.... .......+.+|+.++.. .+||||+++++++...      ..+|++|||+++++.+
T Consensus        32 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  110 (355)
T cd07874          32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQ  110 (355)
T ss_pred             EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHH-hCCCchhceeeeeeccccccccceeEEEhhhhcccHHH
Confidence            46777788899999999997532 33345678889999877 5999999999988654      3589999999985554


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      .+
T Consensus       111 ~~  112 (355)
T cd07874         111 VI  112 (355)
T ss_pred             HH
Confidence            44

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.79  E-value=5e-08  Score=63.49  Aligned_cols=75  Identities=8%  Similarity=0.045  Sum_probs=57.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC----------EEEEEecchhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG----------DVWICMEVMDT   79 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~----------~~~iv~E~~~~   79 (89)
                      .|+++....+|..+|+|.+..... ......+..|+.++.. ++|||++++++.+...+          .+++++||+++
T Consensus        22 ~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  100 (302)
T cd07864          22 QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ-LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH  100 (302)
T ss_pred             EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHh-CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc
Confidence            467888888999999999975422 2233566789999877 59999999999887654          89999999999


Q ss_pred             cHHHHHh
Q psy13291         80 SLDKFYT   86 (89)
Q Consensus        80 sL~~~l~   86 (89)
                      ++..++.
T Consensus       101 ~l~~~l~  107 (302)
T cd07864         101 DLMGLLE  107 (302)
T ss_pred             cHHHHHh
Confidence            5544443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.79  E-value=6.1e-08  Score=64.37  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=59.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .++++....+|..+|+|.+... ........+..|+.++.++.+||||+++++++...  ..+|++|||++++|..+++.
T Consensus        22 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~  101 (337)
T cd07852          22 IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRA  101 (337)
T ss_pred             eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccccCHHHHHhc
Confidence            4677777888999999998643 22233456778999988744999999999998764  37899999998877776653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.78  E-value=6.8e-08  Score=64.65  Aligned_cols=75  Identities=15%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|+++....+|..+|+|.+... .+......+.+|+.++.. .+||||+++++++...      ..+|++|||++++|.+
T Consensus        31 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  109 (353)
T cd07850          31 IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKL-VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQ  109 (353)
T ss_pred             EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHh-cCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHH
Confidence            4677888889999999998653 233345667889999877 5999999999988654      3579999999886666


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      .+.
T Consensus       110 ~~~  112 (353)
T cd07850         110 VIQ  112 (353)
T ss_pred             HHh
Confidence            543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.78  E-value=6.1e-08  Score=65.09  Aligned_cols=74  Identities=16%  Similarity=0.172  Sum_probs=57.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|+.+....+++.+|+|.+.... +......+.+|+.++.. .+||||+++++++...      ..+|++|||++++|.+
T Consensus        39 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  117 (364)
T cd07875          39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ  117 (364)
T ss_pred             EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHh-cCCCCccccceeecccccccccCeEEEEEeCCCCCHHH
Confidence            46777888899999999997532 23345678889999877 5999999999987653      3689999999986655


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      ++
T Consensus       118 ~~  119 (364)
T cd07875         118 VI  119 (364)
T ss_pred             HH
Confidence            54

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.78  E-value=5.9e-08  Score=62.75  Aligned_cols=77  Identities=13%  Similarity=0.061  Sum_probs=56.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhc--CCCCceeeEEeEEEE-----CCEEEEEecchhccHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRS--SDCAHTVQFYGAMFR-----EGDVWICMEVMDTSLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~-----~~~~~iv~E~~~~sL~   82 (89)
                      .|++|....+|+.+|+|.+..... .........|+.++..+  .+||||+++++++..     ...+++++||++++|.
T Consensus        15 ~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~   94 (288)
T cd07863          15 TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLR   94 (288)
T ss_pred             EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHH
Confidence            478888889999999999975321 11223455677776653  379999999998865     2468999999998777


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus        95 ~~~~~   99 (288)
T cd07863          95 TYLDK   99 (288)
T ss_pred             HHHHh
Confidence            66654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.78  E-value=9.3e-08  Score=61.05  Aligned_cols=75  Identities=16%  Similarity=0.189  Sum_probs=57.5

Q ss_pred             cceeEEE--ccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLA--RLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~--~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++..  ..++..+|+|.+.... +....+.+..|+.++.. .+||||+++++.+. .+..+++|||+++ +|.+++.
T Consensus        10 ~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~   87 (257)
T cd05116          10 TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQ-LDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQ   87 (257)
T ss_pred             ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHh-CCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHH
Confidence            3556543  4567889999987543 23345678899999887 59999999998764 4567899999999 9998886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus        88 ~   88 (257)
T cd05116          88 K   88 (257)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.78  E-value=7.4e-08  Score=62.73  Aligned_cols=75  Identities=7%  Similarity=0.019  Sum_probs=57.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--------EEEEEecchhccH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--------DVWICMEVMDTSL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--------~~~iv~E~~~~sL   81 (89)
                      .|+++....++..+|+|.+..... ......+.+|+.++.. +.||||+++++.+...+        ..+++|||+.++|
T Consensus        27 ~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l  105 (310)
T cd07865          27 EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDL  105 (310)
T ss_pred             EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHh-CCCCCccceEEEEecccccccCCCceEEEEEcCCCcCH
Confidence            577888888999999999875322 2223455679999887 59999999999887643        4699999998876


Q ss_pred             HHHHh
Q psy13291         82 DKFYT   86 (89)
Q Consensus        82 ~~~l~   86 (89)
                      .+++.
T Consensus       106 ~~~l~  110 (310)
T cd07865         106 AGLLS  110 (310)
T ss_pred             HHHHH
Confidence            66654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.77  E-value=6.9e-08  Score=61.58  Aligned_cols=75  Identities=13%  Similarity=0.095  Sum_probs=56.7

Q ss_pred             ceeEEEcc---CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHh
Q psy13291         12 PELGLARL---DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      |+.|....   .+..+|+|.+.........+.+..|+.++.. .+|||++++++.+.. ++..+++|||+.+ +|.+++.
T Consensus        11 v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   89 (262)
T cd05058          11 VYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKD-FSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIR   89 (262)
T ss_pred             EEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHcc-CCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHH
Confidence            45555432   3457999988654444456778889998776 599999999997754 5578999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      +
T Consensus        90 ~   90 (262)
T cd05058          90 S   90 (262)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.77  E-value=1e-07  Score=60.57  Aligned_cols=72  Identities=17%  Similarity=0.256  Sum_probs=56.8

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ++++.. .++..+|+|.+......  ...+..|+.++.. .+|||++++++++...+..++++||+++ +|.+++..
T Consensus        20 v~~~~~-~~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (256)
T cd05112          20 VWLGYW-LEKRKVAIKTIREGAMS--EEDFIEEAQVMMK-LSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRA   92 (256)
T ss_pred             EEEEEE-eCCCeEEEEECCCCCCC--HHHHHHHHHHHHh-CCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHh
Confidence            455544 24678999988643222  3457789999888 5999999999999999999999999999 99988754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.77  E-value=5.6e-08  Score=64.58  Aligned_cols=75  Identities=17%  Similarity=0.118  Sum_probs=58.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~l   85 (89)
                      .|+++....+|..||+|.+...........+..|+.++.. ++||||+++++.+...     ..+|+++||+++++.+++
T Consensus        20 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~   98 (336)
T cd07849          20 MVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRR-FKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLI   98 (336)
T ss_pred             EEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHh-CCCCCcCchhheeecccccccceEEEEehhcccCHHHHH
Confidence            4677888889999999999743333445677889999887 4899999999877654     368999999988666655


Q ss_pred             h
Q psy13291         86 T   86 (89)
Q Consensus        86 ~   86 (89)
                      .
T Consensus        99 ~   99 (336)
T cd07849          99 K   99 (336)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.77  E-value=1.1e-07  Score=61.39  Aligned_cols=75  Identities=8%  Similarity=0.044  Sum_probs=59.6

Q ss_pred             ceeEEEcc----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARL----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+.+....    ++..+|+|.+.........+.+.+|+.++.. ++|||++++++++.. +...++++||+++ +|.+++
T Consensus        22 V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l  100 (280)
T cd05043          22 IFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYG-LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFL  100 (280)
T ss_pred             EEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHH
Confidence            55555544    3577999988755555567788899999887 499999999998766 5689999999998 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       101 ~~  102 (280)
T cd05043         101 QQ  102 (280)
T ss_pred             Hh
Confidence            65

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.76  E-value=5.9e-08  Score=60.42  Aligned_cols=76  Identities=18%  Similarity=0.203  Sum_probs=63.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....+|..+|+|.+.........+.+..|+..+... +|||++++++.+......++++||+++ +|.+++..
T Consensus         4 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        4 KVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             EEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            35677777889999999997543322267888999998875 999999999999999999999999999 99998764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.75  E-value=1.3e-07  Score=66.58  Aligned_cols=76  Identities=7%  Similarity=0.013  Sum_probs=60.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--------EEEEEecchhc-c
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--------DVWICMEVMDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--------~~~iv~E~~~~-s   80 (89)
                      .|+++....+|+.+|+|.+.... +......+..|+.++.. .+|+|++++++.+...+        .++++|||+++ +
T Consensus        47 ~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gs  125 (496)
T PTZ00283         47 TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN-CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGD  125 (496)
T ss_pred             EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhc-CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCc
Confidence            36778888899999999997643 34456678899999877 59999999988775432        47899999999 9


Q ss_pred             HHHHHhh
Q psy13291         81 LDKFYTK   87 (89)
Q Consensus        81 L~~~l~~   87 (89)
                      |.+++..
T Consensus       126 L~~~l~~  132 (496)
T PTZ00283        126 LRQEIKS  132 (496)
T ss_pred             HHHHHHH
Confidence            9988753

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.75  E-value=1.5e-07  Score=60.19  Aligned_cols=74  Identities=12%  Similarity=0.154  Sum_probs=56.3

Q ss_pred             ceeEEEcc---CCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE------EEEEecchhc-c
Q psy13291         12 PELGLARL---DPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD------VWICMEVMDT-S   80 (89)
Q Consensus        12 ~~l~~~~~---~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~------~~iv~E~~~~-s   80 (89)
                      |+.+....   ++..+|+|.+.... .......+.+|+.++.. .+||||+++++.+...+.      .++++||+++ +
T Consensus        15 v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~   93 (273)
T cd05035          15 VMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKD-FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGD   93 (273)
T ss_pred             EEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHh-CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCC
Confidence            44554433   44789999997543 33446678899999887 599999999998876543      8999999999 9


Q ss_pred             HHHHHh
Q psy13291         81 LDKFYT   86 (89)
Q Consensus        81 L~~~l~   86 (89)
                      |..++.
T Consensus        94 l~~~l~   99 (273)
T cd05035          94 LHSFLL   99 (273)
T ss_pred             HHHHHH
Confidence            988874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG4645|consensus

Probab=98.75  E-value=1e-09  Score=83.10  Aligned_cols=77  Identities=16%  Similarity=0.171  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      +|+.|.+..+|...|+|.|...... ......-.|..+|.. ++|||++++||+=.+.+.++|+||||+| +|.++++.+
T Consensus      1250 ~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~-lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1250 KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEG-LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHG 1328 (1509)
T ss_pred             eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHh-ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhc
Confidence            6899999999999999999764322 223456678889877 5999999999999999999999999999 999998764

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.74  E-value=1.3e-07  Score=61.32  Aligned_cols=77  Identities=10%  Similarity=0.058  Sum_probs=55.0

Q ss_pred             cceeEEEcc-CCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhc--CCCCceeeEEeEEEE-----CCEEEEEecchhccH
Q psy13291         11 KPELGLARL-DPDSEWSFRITFTVN-TQEHKRLLTDLDICMRS--SDCAHTVQFYGAMFR-----EGDVWICMEVMDTSL   81 (89)
Q Consensus        11 ~~~l~~~~~-~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~-----~~~~~iv~E~~~~sL   81 (89)
                      .|++|.+.. +|..+|+|.+..... ......+.+|+.++..+  ..||||+++++++..     ...++++|||++++|
T Consensus        16 ~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l   95 (290)
T cd07862          16 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDL   95 (290)
T ss_pred             EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCH
Confidence            467787754 468899999975432 22234456677776653  279999999998863     357999999998877


Q ss_pred             HHHHhh
Q psy13291         82 DKFYTK   87 (89)
Q Consensus        82 ~~~l~~   87 (89)
                      .+++..
T Consensus        96 ~~~~~~  101 (290)
T cd07862          96 TTYLDK  101 (290)
T ss_pred             HHHHHh
Confidence            777653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.74  E-value=8.5e-08  Score=61.54  Aligned_cols=72  Identities=17%  Similarity=0.166  Sum_probs=54.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+ ..+|+|.+......  .+.+.+|++++.. .+||||+++++.+ .++..|++|||+++ +|.+++..
T Consensus        21 ~v~~~~~~~~-~~valK~~~~~~~~--~~~~~~E~~~l~~-l~~~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~   93 (262)
T cd05071          21 EVWMGTWNGT-TRVAIKTLKPGTMS--PEAFLQEAQVMKK-LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG   93 (262)
T ss_pred             cEEEEEecCC-ceEEEEecccCccC--HHHHHHHHHHHHh-CCCCCcceEEEEE-CCCCcEEEEEcCCCCcHHHHHhh
Confidence            3566655444 45899998753222  3467889999887 5999999999876 45668999999999 99998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.74  E-value=2.3e-08  Score=64.24  Aligned_cols=77  Identities=12%  Similarity=0.135  Sum_probs=63.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~   88 (89)
                      .++++....+++.+|+|.+.... .....+.+..|+.++.. ..|||++++++.+...+..++++||++++|.+++.+.
T Consensus        14 ~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~   91 (282)
T cd07829          14 VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKE-LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKR   91 (282)
T ss_pred             eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHh-cCCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhh
Confidence            46778888889999999997643 23335667789999887 4899999999999999999999999988888887653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0662|consensus

Probab=98.73  E-value=2.2e-08  Score=63.11  Aligned_cols=76  Identities=11%  Similarity=0.126  Sum_probs=62.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~   88 (89)
                      |..+.++.++++||+|.+....++ ......++|+-+|.. +.|.||+++++...++..+-+++|||+.+|..+...+
T Consensus        18 vfkarn~~t~eivalkrvrlddddegvpssalreicllke-lkhknivrl~dvlhsdkkltlvfe~cdqdlkkyfdsl   94 (292)
T KOG0662|consen   18 VFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSL   94 (292)
T ss_pred             eEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHH-hhhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhc
Confidence            456778889999999999865333 234678899999887 5999999999999999999999999998877776543

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.73  E-value=5e-08  Score=62.68  Aligned_cols=76  Identities=16%  Similarity=0.237  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .++.+....+|..+|+|.+...... .....+..|+.++..+ .|||++++++.+..++.+++++||+++++.+++..
T Consensus        14 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~   90 (283)
T cd05118          14 VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKD   90 (283)
T ss_pred             eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHh
Confidence            4677777788999999998754322 3356778899998874 89999999999999999999999998866666544

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1027|consensus

Probab=98.72  E-value=1.9e-08  Score=73.62  Aligned_cols=66  Identities=11%  Similarity=0.166  Sum_probs=57.0

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      ...|+.||||.+-    .+......+|+.+|+..-.|||||++|+.=.++...||++|+|..||++++..
T Consensus       530 ~ye~R~VAVKrll----~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~  595 (903)
T KOG1027|consen  530 VYEGREVAVKRLL----EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIES  595 (903)
T ss_pred             eeCCceehHHHHh----hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHhc
Confidence            3477889999774    23455678999999988899999999999999999999999999999999875

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.72  E-value=8.3e-08  Score=61.74  Aligned_cols=65  Identities=14%  Similarity=0.150  Sum_probs=51.7

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ...+|+|.+.... ......+..|+.++.. .+||||+++++++......+++|||+++ +|+.++.+
T Consensus        32 ~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   97 (262)
T cd05077          32 EIKVILKVLDPSH-RDISLAFFETASMMRQ-VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHR   97 (262)
T ss_pred             ceeEEEeecChhh-hhHHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHh
Confidence            3458888876432 2335567788888877 5999999999999998999999999999 99888754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PRK10345 hypothetical protein; Provisional

Probab=98.72  E-value=1.7e-07  Score=59.58  Aligned_cols=69  Identities=13%  Similarity=0.143  Sum_probs=51.8

Q ss_pred             EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC----CCCceeeEEeEEEECC---E-EEEEecc--hhc-cHHHHH
Q psy13291         17 ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS----DCAHTVQFYGAMFREG---D-VWICMEV--MDT-SLDKFY   85 (89)
Q Consensus        17 ~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~----~hpniv~~~~~~~~~~---~-~~iv~E~--~~~-sL~~~l   85 (89)
                      ++.++.. +||++..... ...+.+.+|+.++..+.    .||||++++|++.++.   . +++++||  +++ +|.+++
T Consensus        21 hp~~~~k-~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l   98 (210)
T PRK10345         21 HPEDAQR-CIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFA   98 (210)
T ss_pred             CCCCcCe-EEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHH
Confidence            6666665 6998865322 23567899999988752    5899999999998863   4 4588999  557 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ++
T Consensus        99 ~~  100 (210)
T PRK10345         99 EQ  100 (210)
T ss_pred             Hc
Confidence            75

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.71  E-value=1.9e-07  Score=59.68  Aligned_cols=71  Identities=14%  Similarity=0.191  Sum_probs=54.7

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |++|.. .++..+|+|.+......  .+.+.+|+.++.. .+|||++++++.+ ..+.++++|||+++ +|.+++..
T Consensus        22 v~~~~~-~~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~-l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~   93 (260)
T cd05067          22 VWMGYY-NGHTKVAIKSLKQGSMS--PEAFLAEANLMKQ-LQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKT   93 (260)
T ss_pred             EEeeec-CCCceEEEEEecCCCCc--HHHHHHHHHHHHh-cCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHh
Confidence            455553 45678999998754322  4568889999887 5999999999876 45679999999999 99988754

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.71  E-value=1.4e-07  Score=65.31  Aligned_cols=70  Identities=9%  Similarity=-0.004  Sum_probs=53.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--------CEEEEEecchhccHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--------GDVWICMEVMDTSLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--------~~~~iv~E~~~~sL~   82 (89)
                      .|++|....+++.+|+|.+.....     ...+|+.+|.. ++||||+++++++...        ..++++|||+++++.
T Consensus        81 ~Vy~~~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~-l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~  154 (440)
T PTZ00036         81 VVYEAICIDTSEKVAIKKVLQDPQ-----YKNRELLIMKN-LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVH  154 (440)
T ss_pred             EEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHh-cCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHH
Confidence            477888888999999998864321     23468999887 5999999998877542        257899999999665


Q ss_pred             HHHh
Q psy13291         83 KFYT   86 (89)
Q Consensus        83 ~~l~   86 (89)
                      +++.
T Consensus       155 ~~~~  158 (440)
T PTZ00036        155 KYMK  158 (440)
T ss_pred             HHHH
Confidence            5543

>KOG4257|consensus

Probab=98.71  E-value=4.8e-08  Score=70.53  Aligned_cols=65  Identities=15%  Similarity=0.282  Sum_probs=54.7

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .-||||.-+.+.+.+..+.|+.|..+|.. ++|||||++.|.+.. ..+||+||+++- .|..+|+..
T Consensus       419 iaVAvKtCK~d~t~d~tekflqEa~iMrn-fdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~n  484 (974)
T KOG4257|consen  419 IAVAVKTCKTDCTPDDTEKFLQEASIMRN-FDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQN  484 (974)
T ss_pred             eeeeeehhccCCChhhHHHHHHHHHHHHh-CCCcchhheeeeeec-cceeEEEecccchhHHHHHHhc
Confidence            34788887766666668999999999777 699999999999875 479999999998 999999864

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.70  E-value=1.2e-07  Score=61.50  Aligned_cols=76  Identities=8%  Similarity=-0.025  Sum_probs=58.9

Q ss_pred             ceeEEEc---cCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         12 PELGLAR---LDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~~---~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      |+++...   .++..+|+|.+....   .....+.+..|+.++....+||||+.+++++...+..+++|||+++ +|.++
T Consensus        16 vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (288)
T cd05583          16 VFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTH   95 (288)
T ss_pred             EEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHH
Confidence            4444432   467889999987432   1223456788999998866899999999999999999999999999 99887


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        96 ~~~   98 (288)
T cd05583          96 LYQ   98 (288)
T ss_pred             Hhh
Confidence            754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0200|consensus

Probab=98.70  E-value=5.5e-08  Score=69.99  Aligned_cols=68  Identities=18%  Similarity=0.273  Sum_probs=61.2

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ...||||.+.......+.+.+..|+.+|.....||||+.+.|++...+.+++++||+.. +|.++++..
T Consensus       328 ~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~  396 (609)
T KOG0200|consen  328 YVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKK  396 (609)
T ss_pred             eEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhc
Confidence            45699999987666677889999999999988999999999999999999999999999 999999864

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.70  E-value=2.6e-07  Score=59.46  Aligned_cols=77  Identities=8%  Similarity=0.032  Sum_probs=58.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhc--CCCCceeeEEeEEEECCE-----EEEEecchhccHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRS--SDCAHTVQFYGAMFREGD-----VWICMEVMDTSLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~~~~-----~~iv~E~~~~sL~   82 (89)
                      .++++....++..+|+|.+...... .....+..|+.++..+  ..|||++++++++...+.     ++++|||++++|.
T Consensus        14 ~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~   93 (287)
T cd07838          14 TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLA   93 (287)
T ss_pred             EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHH
Confidence            4677888788999999999753322 2234566788776653  269999999999988776     9999999988776


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus        94 ~~l~~   98 (287)
T cd07838          94 TYLSK   98 (287)
T ss_pred             HHHHH
Confidence            66654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.70  E-value=4.5e-07  Score=54.93  Aligned_cols=77  Identities=17%  Similarity=0.213  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .++.+....+|..+++|...........+.+.+|+..+.. ..|++++++++.+...+..++++||+++ +|.+++...
T Consensus         8 ~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~-l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~   85 (215)
T cd00180           8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKK-LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN   85 (215)
T ss_pred             EEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHh-cCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhc
Confidence            4566666667999999999754332235678899999887 5899999999999999999999999998 999988653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.69  E-value=5.7e-08  Score=64.50  Aligned_cols=75  Identities=15%  Similarity=0.162  Sum_probs=58.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~sL~~~l   85 (89)
                      .|+++....+|..+|+|.+..... ......+..|+.+|.. ++||||+++++++..    ...++++|||+.++|.+++
T Consensus        20 ~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~   98 (334)
T cd07855          20 VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRH-FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHII   98 (334)
T ss_pred             EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHh-cCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHh
Confidence            467788888999999999975422 2335667789999887 489999999988764    3579999999987777776


Q ss_pred             h
Q psy13291         86 T   86 (89)
Q Consensus        86 ~   86 (89)
                      .
T Consensus        99 ~   99 (334)
T cd07855          99 H   99 (334)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.68  E-value=3.2e-07  Score=56.80  Aligned_cols=76  Identities=14%  Similarity=0.196  Sum_probs=63.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.+....++..+|+|.+.........+.+..|+..+... .|+|++++++.+...+..++++||+++ +|.+++..
T Consensus        14 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   90 (225)
T smart00221       14 KVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRK   90 (225)
T ss_pred             EEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHh
Confidence            35677777788999999997543322467888899998875 999999999999999999999999999 99998864

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.68  E-value=2.3e-07  Score=62.04  Aligned_cols=76  Identities=14%  Similarity=0.129  Sum_probs=58.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~   83 (89)
                      .|+++....+|..+|+|.+.... .......+.+|+.+|.. .+||||+++++++...+      ..+++|||+.++|.+
T Consensus        30 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  108 (343)
T cd07880          30 TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH-MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGK  108 (343)
T ss_pred             EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHh-cCCCCccceeeeecCCccccccceEEEEEecCCCCHHH
Confidence            46778888899999999986432 22334568899999887 59999999999987643      469999999448887


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       109 ~~~~  112 (343)
T cd07880         109 LMKH  112 (343)
T ss_pred             HHhc
Confidence            7653

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.67  E-value=7.7e-08  Score=63.50  Aligned_cols=76  Identities=16%  Similarity=0.201  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~   84 (89)
                      .+++|....+|..+|+|.+..... ....+.+..|+.++.. ++||||+++++.+...+     .+|++|||++++|.++
T Consensus        15 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~   93 (330)
T cd07834          15 VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRH-LRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKV   93 (330)
T ss_pred             EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHh-cCCcchhhhhhhhcccCcccccceEEEecchhhhHHHH
Confidence            467788778899999999975432 3345678899999887 58999999999988765     8999999999877777


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        94 l~~   96 (330)
T cd07834          94 IKS   96 (330)
T ss_pred             HhC
Confidence            654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.67  E-value=9.4e-08  Score=63.61  Aligned_cols=76  Identities=7%  Similarity=0.082  Sum_probs=59.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|+++....++..+|+|.+..... ......+.+|+.+|.. ++||||+++++++...      ...|+++|++.++|.+
T Consensus        30 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  108 (343)
T cd07878          30 SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH-MKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNN  108 (343)
T ss_pred             EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHh-cCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHH
Confidence            477888888999999999975322 2334567789999888 5999999999887643      4689999998668888


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       109 ~~~~  112 (343)
T cd07878         109 IVKC  112 (343)
T ss_pred             HHhc
Confidence            7653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.66  E-value=2e-07  Score=65.23  Aligned_cols=68  Identities=6%  Similarity=-0.099  Sum_probs=55.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|+++.+..+++.+|+|...       ...+.+|+.+|.. ++||||+++++++...+..+++||++.++|.+++.
T Consensus       184 ~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~-L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~  251 (461)
T PHA03211        184 CVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRR-LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLG  251 (461)
T ss_pred             EEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHH-CCCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHH
Confidence            47888888899999999643       2235679999888 59999999999999999999999999876666554

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.65  E-value=2e-07  Score=59.60  Aligned_cols=72  Identities=11%  Similarity=0.090  Sum_probs=55.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.. ..+..+|+|.+...  ....+.+.+|+.++.. .+|||++++++.+.. ...+++|||+++ +|.+++.+
T Consensus        21 ~vy~~~~-~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~   93 (260)
T cd05073          21 EVWMATY-NKHTKVAVKTMKPG--SMSVEAFLAEANVMKT-LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKS   93 (260)
T ss_pred             EEEEEEe-cCCccEEEEecCCC--hhHHHHHHHHHHHHHh-cCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHh
Confidence            4566643 34456899987632  2335678889999887 599999999998877 788999999999 99998865

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0199|consensus

Probab=98.65  E-value=3.5e-08  Score=71.84  Aligned_cols=63  Identities=13%  Similarity=0.125  Sum_probs=53.9

Q ss_pred             EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         23 SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        23 ~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .||||.+..........+|++|+.+|.+ +.|||+|++||.... ..+.+|+|++++ ||.+-|++
T Consensus       140 ~VAVKclr~d~l~~~mddflrEas~M~~-L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrk  203 (1039)
T KOG0199|consen  140 NVAVKCLRDDSLNAIMDDFLREASHMLK-LQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRK  203 (1039)
T ss_pred             eEEEEeccCCccchhHHHHHHHHHHHHh-ccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhh
Confidence            4999999765444468899999999988 599999999999998 678999999999 88877765

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.65  E-value=2.9e-07  Score=60.47  Aligned_cols=72  Identities=8%  Similarity=0.062  Sum_probs=54.7

Q ss_pred             cceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|...  .++..+|+|.+.....   ...+.+|+.+|.. ++||||+++++.+..  +..+|+++||++++|.+++.
T Consensus        16 ~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~   91 (317)
T cd07868          16 HVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRE-LKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK   91 (317)
T ss_pred             EEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHh-cCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHH
Confidence            36677654  4678899999865322   2346689999888 599999999999865  45799999999887766654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.65  E-value=3.5e-07  Score=58.41  Aligned_cols=71  Identities=18%  Similarity=0.185  Sum_probs=53.9

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++... .+..+|+|.+......  .+.+.+|+.++.. ++|||++++++.+. .+..+++|||+++ +|.+++..
T Consensus        22 v~~~~~~-~~~~~~~k~~~~~~~~--~~~~~~E~~~l~~-l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~   93 (260)
T cd05070          22 VWMGTWN-GNTKVAVKTLKPGTMS--PESFLEEAQIMKK-LRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKD   93 (260)
T ss_pred             EEEEEec-CCceeEEEEecCCCCC--HHHHHHHHHHHHh-cCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHh
Confidence            4555433 5567899988753222  3568889999888 59999999998764 5678999999999 99998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.65  E-value=1.4e-07  Score=62.74  Aligned_cols=76  Identities=20%  Similarity=0.200  Sum_probs=58.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~   84 (89)
                      .++++....+|..+|+|.+.... .......+..|+.++.. .+||||+++++.+...     ..+|+++||++++|.++
T Consensus        20 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~   98 (337)
T cd07858          20 IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH-LDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQI   98 (337)
T ss_pred             EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHh-cCCCCccchHHheecccccccCcEEEEEeCCCCCHHHH
Confidence            56788888899999999987532 22234567789999887 5999999999987654     35899999998877766


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        99 ~~~  101 (337)
T cd07858          99 IRS  101 (337)
T ss_pred             Hhc
Confidence            643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.65  E-value=3.1e-07  Score=58.73  Aligned_cols=71  Identities=17%  Similarity=0.140  Sum_probs=52.9

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++....+ ..+|+|.+.....  ..+.+.+|+.++.. ..|||++++++.+. .+..+++|||+++ +|.+++..
T Consensus        22 v~~~~~~~~-~~~~lK~~~~~~~--~~~~~~~E~~~l~~-l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~   93 (260)
T cd05069          22 VWMGTWNGT-TKVAIKTLKPGTM--MPEAFLQEAQIMKK-LRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKE   93 (260)
T ss_pred             EEEEEEcCC-ceEEEEEcccCCc--cHHHHHHHHHHHHh-CCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhh
Confidence            455554333 3589998764322  24567889999887 59999999998764 5678999999999 99998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.64  E-value=2e-07  Score=62.72  Aligned_cols=68  Identities=7%  Similarity=0.013  Sum_probs=55.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|....++..+|+|.....       ....|+.++.. ++||||+++++++...+..+++|||+.++|.+++.
T Consensus        81 ~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~  148 (357)
T PHA03209         81 RVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQN-VNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLT  148 (357)
T ss_pred             EEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHh-CCCCCCcChhheEEeCCeeEEEEEccCCcHHHHHH
Confidence            5788888888999999975432       12458888877 59999999999999999999999999886666654

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.64  E-value=5.2e-07  Score=58.24  Aligned_cols=75  Identities=11%  Similarity=0.101  Sum_probs=57.9

Q ss_pred             cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+.+....+|.    .||+|.+...........+..|+.++.. .+||||+.+++.+.. ...++++||+++ +|.+++
T Consensus        22 ~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l   99 (279)
T cd05109          22 TVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG-VGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYV   99 (279)
T ss_pred             eEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHh-cCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHH
Confidence            356666666665    4899998765555556778899999877 599999999998865 457889999999 998887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      +.
T Consensus       100 ~~  101 (279)
T cd05109         100 RE  101 (279)
T ss_pred             hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.63  E-value=4.3e-07  Score=58.81  Aligned_cols=75  Identities=13%  Similarity=0.023  Sum_probs=54.6

Q ss_pred             cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+.+....+|.    .+++|.+...........+..|+.++.. .+||||+++++++. .+..++++||+++ +|.+++
T Consensus        22 ~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~-l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l   99 (279)
T cd05111          22 TVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS-LDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHV   99 (279)
T ss_pred             ceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc-CCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHH
Confidence            356666666666    3677777543333445667778888776 59999999999864 4567889999998 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       100 ~~  101 (279)
T cd05111         100 RQ  101 (279)
T ss_pred             Hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.62  E-value=5e-07  Score=59.21  Aligned_cols=72  Identities=8%  Similarity=0.055  Sum_probs=53.9

Q ss_pred             cceeEEEcc--CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARL--DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~--~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|....  ++..+|+|.+.....   ...+.+|+.+|.. ++||||+++++++..  +..+|+++||++++|.+++.
T Consensus        16 ~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~   91 (317)
T cd07867          16 HVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRE-LKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIK   91 (317)
T ss_pred             eEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHh-CCCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHH
Confidence            366676543  567899999864322   2346789999887 599999999998865  45899999999986666553

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.62  E-value=5.3e-07  Score=57.77  Aligned_cols=74  Identities=12%  Similarity=0.149  Sum_probs=56.6

Q ss_pred             cceeEEEccCCC--EEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhc-c
Q psy13291         11 KPELGLARLDPD--SEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~~~~--~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~-s   80 (89)
                      .|+.+....++.  .+|+|.+... ......+.+..|+.++.. ++||||+++++.+...      ...+++|||+++ +
T Consensus        14 ~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~   92 (272)
T cd05075          14 SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKE-FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGD   92 (272)
T ss_pred             eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCc
Confidence            466666666665  5899988754 234456788899999887 5999999999977542      257899999999 9


Q ss_pred             HHHHH
Q psy13291         81 LDKFY   85 (89)
Q Consensus        81 L~~~l   85 (89)
                      |.+++
T Consensus        93 l~~~~   97 (272)
T cd05075          93 LHSFL   97 (272)
T ss_pred             HHHHH
Confidence            98876

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.61  E-value=4.1e-07  Score=57.93  Aligned_cols=65  Identities=17%  Similarity=0.302  Sum_probs=52.2

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..++..+|+|.+....   ..+.+..|+.++.. .+|||++++++++... ..+++|||+++ +|.++++.
T Consensus        26 ~~~~~~~~iK~~~~~~---~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~   91 (254)
T cd05083          26 EYTGQKVAVKNIKCDV---TAQAFLEETAVMTK-LHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRT   91 (254)
T ss_pred             ccCCCceEEEeecCcc---hHHHHHHHHHHHHh-CCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHh
Confidence            3577889999886432   24568889999887 5999999999988654 57999999999 99998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.60  E-value=2.6e-07  Score=61.70  Aligned_cols=74  Identities=22%  Similarity=0.183  Sum_probs=58.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--------------CEEEEEecc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--------------GDVWICMEV   76 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--------------~~~~iv~E~   76 (89)
                      .|+++....+|..+|+|.+..... .....+.+|+.++.. .+||||+++++++...              ..+|+++||
T Consensus        20 ~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~   97 (342)
T cd07854          20 LVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRR-LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEY   97 (342)
T ss_pred             EEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHh-cCCCcchhhHhhhcccccccccccccccccceEEEEeec
Confidence            467888888999999999975433 335668889999887 5999999999776543              368999999


Q ss_pred             hhccHHHHHh
Q psy13291         77 MDTSLDKFYT   86 (89)
Q Consensus        77 ~~~sL~~~l~   86 (89)
                      ++++|.+++.
T Consensus        98 ~~~~L~~~~~  107 (342)
T cd07854          98 METDLANVLE  107 (342)
T ss_pred             ccccHHHHHH
Confidence            9887776664

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4279|consensus

Probab=98.59  E-value=3.8e-08  Score=71.90  Aligned_cols=74  Identities=15%  Similarity=0.076  Sum_probs=63.1

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+-+....|...+|||.|+. .++.+.+.+-.|+.+.+. +.|.|||+|.|++..++.+-|+||-.+| ||.++|+.
T Consensus       591 VYA~RD~~tqvrIaIKEIpe-kdsr~~QPLhEEIaLH~~-LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrs  665 (1226)
T KOG4279|consen  591 VYAARDMDTQVRIAIKEIPE-KDSREVQPLHEEIALHST-LRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRS  665 (1226)
T ss_pred             EEeeccccceeEEEeeeccc-ccchhhccHHHHHHHHHH-HhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHh
Confidence            56677777888899999984 344567888889998666 5999999999999999999999999999 99999874

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.59  E-value=9e-08  Score=61.07  Aligned_cols=76  Identities=14%  Similarity=0.090  Sum_probs=57.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec----CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT----VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~----~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .++++....++..+++|.+...    ........+..|+.++.. .+||||+++++++..++..++++||+++ +|++++
T Consensus        15 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~   93 (260)
T cd08222          15 TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSK-LDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKL   93 (260)
T ss_pred             eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHh-CCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHH
Confidence            4566666666666777766532    112234456678888777 5999999999999999999999999999 999887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        94 ~~   95 (260)
T cd08222          94 EE   95 (260)
T ss_pred             HH
Confidence            53

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.58  E-value=7e-07  Score=58.51  Aligned_cols=75  Identities=12%  Similarity=0.137  Sum_probs=56.4

Q ss_pred             cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+.+....+|.    .+|+|.+...........+.+|+.++.. .+||||+++++.+... ..++++||+++ +|.+++
T Consensus        22 ~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~-l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~   99 (303)
T cd05110          22 TVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS-MDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYV   99 (303)
T ss_pred             cEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHH
Confidence            456666666665    4688888654444445568889999877 5999999999988654 46788999998 888887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       100 ~~  101 (303)
T cd05110         100 HE  101 (303)
T ss_pred             Hh
Confidence            54

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1151|consensus

Probab=98.58  E-value=1.2e-07  Score=66.51  Aligned_cols=76  Identities=13%  Similarity=0.065  Sum_probs=58.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCH------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNT------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~   83 (89)
                      |+.|......+.+|+|+-..+.++      +......+|-.|.. .++||-||.+|++|.- .+.++-|+|||+| +|+-
T Consensus       479 VyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHK-eLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDF  557 (775)
T KOG1151|consen  479 VYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHK-ELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDF  557 (775)
T ss_pred             HHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhh-ccCcceeeeeeeeeeeccccceeeeeecCCCchhH
Confidence            344555567788999977554333      23456789999954 4799999999999976 5689999999999 9999


Q ss_pred             HHhhc
Q psy13291         84 FYTKV   88 (89)
Q Consensus        84 ~l~~~   88 (89)
                      +|+.+
T Consensus       558 YLKQh  562 (775)
T KOG1151|consen  558 YLKQH  562 (775)
T ss_pred             HHHhh
Confidence            99875

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.57  E-value=9e-07  Score=58.75  Aligned_cols=76  Identities=13%  Similarity=0.099  Sum_probs=57.4

Q ss_pred             cceeEEEccC--CCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC----CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLD--PDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE----GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~--~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~----~~~~iv~E~~~~sL~~   83 (89)
                      .|+++....+  +..+|+|.+..... ....+.+..|+.++....+||||+++++.....    ..+|+++||++++|.+
T Consensus        15 ~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~   94 (332)
T cd07857          15 IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQ   94 (332)
T ss_pred             EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHH
Confidence            4677777777  88999999875322 223566788999988865799999999875432    4689999999887777


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      ++.
T Consensus        95 ~l~   97 (332)
T cd07857          95 IIR   97 (332)
T ss_pred             HHh
Confidence            764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0658|consensus

Probab=98.56  E-value=6.1e-08  Score=65.45  Aligned_cols=70  Identities=11%  Similarity=0.022  Sum_probs=53.0

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--C---EEEEEecchhccHHHHHh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--G---DVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~---~~~iv~E~~~~sL~~~l~   86 (89)
                      |+-+....+++.+|||.+-....     --.+|+++|.. ..|||||++.-+|...  +   ...+|||||+.+|.++++
T Consensus        40 Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~-l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r  113 (364)
T KOG0658|consen   40 VYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRK-LDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIR  113 (364)
T ss_pred             EEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHh-cCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHH
Confidence            45556667889999999854311     22358999876 6999999998877663  2   567899999999999887


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       114 ~  114 (364)
T KOG0658|consen  114 H  114 (364)
T ss_pred             H
Confidence            3

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.56  E-value=5.5e-07  Score=61.50  Aligned_cols=68  Identities=10%  Similarity=-0.037  Sum_probs=51.0

Q ss_pred             cceeEEEcc-CCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceee-EEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARL-DPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQ-FYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~-~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~-~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      +|++|.+.. +++.+|+|.+....    .....+.+.+|+.+|..+ +|+|++. +++    .+..|++||||+| +|..
T Consensus        33 ~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         33 TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLA----TGKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEE----cCCcEEEEEccCCCCHHH
Confidence            578887776 77888999876331    233456788999999884 8999885 443    2568999999999 8863

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.56  E-value=9e-07  Score=59.20  Aligned_cols=76  Identities=9%  Similarity=0.100  Sum_probs=57.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|+++....+|..+|+|.+.... .....+.+.+|+.++.+ .+||||+++++++...      +..+++++++.++|.+
T Consensus        32 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~  110 (345)
T cd07877          32 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN  110 (345)
T ss_pred             EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHH-cCCCcccceeeeeeecccccccccEEEEehhcccCHHH
Confidence            46777777899999999997532 22234567889999887 5999999999988653      3578999988558887


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       111 ~~~~  114 (345)
T cd07877         111 IVKC  114 (345)
T ss_pred             HHhc
Confidence            7653

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.55  E-value=1.1e-06  Score=55.99  Aligned_cols=65  Identities=17%  Similarity=0.251  Sum_probs=52.1

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..|..+|+|.+...   ...+.+..|+.++.. .+|||++++++++.. .+..+++|||+++ +|.++++.
T Consensus        27 ~~~~~~~~k~~~~~---~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   93 (256)
T cd05082          27 YRGNKVAVKCIKND---ATAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS   93 (256)
T ss_pred             EcCCcEEEEEeCCC---chHHHHHHHHHHHHh-CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHh
Confidence            35788999988632   224568889999887 599999999998755 4679999999999 99998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.53  E-value=2.1e-07  Score=62.09  Aligned_cols=76  Identities=9%  Similarity=0.121  Sum_probs=59.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE------EEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD------VWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~------~~iv~E~~~~sL~~   83 (89)
                      .++++....++..+|+|.+.... +......+..|+.++.. ..|||++++.+++...+.      +++++||+.++|.+
T Consensus        30 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~  108 (343)
T cd07851          30 QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKH-MDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNN  108 (343)
T ss_pred             EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHh-ccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHH
Confidence            56778888899999999986532 23345667889999887 599999999988876554      99999999668888


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       109 ~~~~  112 (343)
T cd07851         109 IVKC  112 (343)
T ss_pred             HHhc
Confidence            7653

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0596|consensus

Probab=98.52  E-value=2.6e-07  Score=65.74  Aligned_cols=77  Identities=16%  Similarity=0.172  Sum_probs=61.7

Q ss_pred             cceeEEEccCCCEEEEEEEe-ecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRIT-FTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~-~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~   88 (89)
                      +|+.+..... +.+|+|.+. ...+....+.+..|+.+|.++.+|.+||+++++=..++.+|+||||=+.+|..+|++.
T Consensus       376 kV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~  453 (677)
T KOG0596|consen  376 KVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKK  453 (677)
T ss_pred             eeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccccHHHHHHhc
Confidence            5666654333 445555554 4567777899999999999999999999999999999999999997666999999763

>KOG0612|consensus

Probab=98.51  E-value=1.9e-08  Score=75.70  Aligned_cols=76  Identities=16%  Similarity=0.075  Sum_probs=62.8

Q ss_pred             ceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         12 PELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      |.++.++.|+.+||.|+++.-  ....+...|..|-.+|.- .+.+=|++++-+|.++.++|+|||||+| +|-.++.+.
T Consensus        91 V~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~-~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~  169 (1317)
T KOG0612|consen   91 VALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVF-GNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKF  169 (1317)
T ss_pred             eEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHc-CCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhc
Confidence            678999999999999999751  122335567777788655 5889999999999999999999999999 999988764

>KOG1035|consensus

Probab=98.51  E-value=7.2e-08  Score=73.00  Aligned_cols=57  Identities=14%  Similarity=0.191  Sum_probs=50.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG   68 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~   68 (89)
                      -|.+|.++..|+.||||.|+...++.....+.+|+.+|++ ++|||||+||.++....
T Consensus       494 ~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LAr-LnHpNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  494 SVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLAR-LNHPNVVRYYSAWVEST  550 (1351)
T ss_pred             eEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhccC
Confidence            3788999999999999999987766677889999999999 59999999999887654

>KOG0584|consensus

Probab=98.49  E-value=1.1e-07  Score=67.98  Aligned_cols=77  Identities=12%  Similarity=0.179  Sum_probs=58.4

Q ss_pred             cceeEEEccCCCEEEEEEEe---ecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRIT---FTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~---~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~   84 (89)
                      .||.|....+|..||==.+.   ........+++..|+++|.. +.|||||+||+++.+.+  .+.+++|++.+ +|-.|
T Consensus        55 tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKs-L~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y  133 (632)
T KOG0584|consen   55 TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKS-LKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREY  133 (632)
T ss_pred             eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHcc-CCCCceeeeeeheecCCCceeeeeeecccCCcHHHH
Confidence            45666665566554433332   23344567899999999987 59999999999999875  59999999999 99999


Q ss_pred             Hhhc
Q psy13291         85 YTKV   88 (89)
Q Consensus        85 l~~~   88 (89)
                      ++++
T Consensus       134 ~kk~  137 (632)
T KOG0584|consen  134 RKKH  137 (632)
T ss_pred             HHHh
Confidence            9875

>KOG0690|consensus

Probab=98.48  E-value=7.1e-08  Score=65.34  Aligned_cols=71  Identities=11%  Similarity=-0.011  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      ||-||..+.+|..+|+|++...  ...++...-+.|-++|+. ..||++..+.-+|+.++.++.||||++| .|-
T Consensus       183 KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~-~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf  256 (516)
T KOG0690|consen  183 KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQN-CRHPFLTSLKYSFQTQDRLCFVMEYANGGELF  256 (516)
T ss_pred             eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHh-ccCcHHHHhhhhhccCceEEEEEEEccCceEe
Confidence            6888999999999999999764  234456677889999888 5999999999999999999999999999 654

>KOG0604|consensus

Probab=98.48  E-value=5.1e-08  Score=65.15  Aligned_cols=71  Identities=13%  Similarity=0.023  Sum_probs=55.7

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHH
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~   84 (89)
                      -||-.|.++.||+.+|+|++..      .+...+|+++.-...+|||||++.++|..    ...+.||||.|+| .|-+-
T Consensus        76 GkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsr  149 (400)
T KOG0604|consen   76 GKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSR  149 (400)
T ss_pred             CceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHH
Confidence            3677889999999999998853      33455677776555699999999998865    3589999999999 76555


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      |+
T Consensus       150 iq  151 (400)
T KOG0604|consen  150 IQ  151 (400)
T ss_pred             HH
Confidence            44

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.46  E-value=2.1e-06  Score=54.99  Aligned_cols=75  Identities=9%  Similarity=0.103  Sum_probs=55.7

Q ss_pred             cceeEEEc---cCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhc-
Q psy13291         11 KPELGLAR---LDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDT-   79 (89)
Q Consensus        11 ~~~l~~~~---~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~-   79 (89)
                      .|+.+...   .++..+|+|.+.... .....+.+.+|+.++.. ++||||+++++.+....      ..++++||+.+ 
T Consensus        14 ~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (273)
T cd05074          14 SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKE-FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHG   92 (273)
T ss_pred             CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhc-CCCCCcceEEEEEccCCCCCcccceEEEEecCCCC
Confidence            34555433   467889999997543 33446778899999887 59999999999886532      35788999998 


Q ss_pred             cHHHHHh
Q psy13291         80 SLDKFYT   86 (89)
Q Consensus        80 sL~~~l~   86 (89)
                      +|.+++.
T Consensus        93 ~l~~~~~   99 (273)
T cd05074          93 DLHTFLL   99 (273)
T ss_pred             cHHHHHH
Confidence            9887763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.45  E-value=8.6e-07  Score=57.72  Aligned_cols=74  Identities=12%  Similarity=0.075  Sum_probs=55.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--------CEEEEEecchhccH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--------GDVWICMEVMDTSL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--------~~~~iv~E~~~~sL   81 (89)
                      .|+++....++..+|+|.+..... +.....+.+|+.++.. ++||||+++++.+...        ..+++++||+++++
T Consensus        23 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l  101 (311)
T cd07866          23 EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKK-LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDL  101 (311)
T ss_pred             EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHh-cCCCCccchhhheecccccccccCceEEEEEecCCcCH
Confidence            577888888999999999975422 2223456789999887 5999999999887543        35799999998855


Q ss_pred             HHHH
Q psy13291         82 DKFY   85 (89)
Q Consensus        82 ~~~l   85 (89)
                      ...+
T Consensus       102 ~~~~  105 (311)
T cd07866         102 SGLL  105 (311)
T ss_pred             HHHH
Confidence            5444

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.43  E-value=1.9e-06  Score=58.68  Aligned_cols=69  Identities=12%  Similarity=-0.003  Sum_probs=52.4

Q ss_pred             cceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|...  .++..+|+|.+...      ....+|+.+|.. ++||||+++++.+...+.++++||++.++|.+++.
T Consensus       107 ~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~  177 (392)
T PHA03207        107 EVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKT-ISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVD  177 (392)
T ss_pred             EEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHh-cCCCCccceeeeEeeCCEEEEEehhcCCCHHHHHH
Confidence            35555543  35577899987642      123469999887 59999999999999999999999999886666654

>KOG0695|consensus

Probab=98.41  E-value=1e-07  Score=64.90  Aligned_cols=72  Identities=11%  Similarity=0.058  Sum_probs=61.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      ||-++.+..|.+++|+|++...  +++++.+=++.|-.+..+..+||+++-++.+|..+..++.+.||.+| +|-
T Consensus       265 kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlm  339 (593)
T KOG0695|consen  265 KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLM  339 (593)
T ss_pred             hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCccee
Confidence            6778888999999999999763  44555666677888888878999999999999999999999999999 864

>KOG2052|consensus

Probab=98.40  E-value=5e-07  Score=62.80  Aligned_cols=69  Identities=10%  Similarity=0.193  Sum_probs=53.3

Q ss_pred             EEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHh-cCCCCceeeEEeEEEEC----CEEEEEecchhc-cHHHHHhhc
Q psy13291         16 LARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMR-SSDCAHTVQFYGAMFRE----GDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        16 ~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~-~~~hpniv~~~~~~~~~----~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ..++.|+.||||++...    +-+...+|.+|.+. ++.|+||+.|.++-...    ..+|++.||=+. ||.++|.+.
T Consensus       229 rG~wrGe~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~  303 (513)
T KOG2052|consen  229 RGRWRGEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN  303 (513)
T ss_pred             eccccCCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc
Confidence            34578899999999743    13345667777664 45999999999877553    279999999999 999999763

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.40  E-value=1.5e-06  Score=58.08  Aligned_cols=74  Identities=12%  Similarity=0.149  Sum_probs=56.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|+.|....+|..+|+|.+.... .......+.+|+.++.. ..||||+++++++...      ...|+++||+.+++..
T Consensus        30 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  108 (342)
T cd07879          30 SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH-MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQK  108 (342)
T ss_pred             EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHh-cCCCCccchhheecccccCCCCceEEEEecccccCHHH
Confidence            46677777889999999987532 22234567889999887 5999999999988754      3579999999776665


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      ++
T Consensus       109 ~~  110 (342)
T cd07879         109 IM  110 (342)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0696|consensus

Probab=98.39  E-value=1.9e-08  Score=69.75  Aligned_cols=78  Identities=10%  Similarity=0.041  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ||-|+..+.|.+.+|||++...  .++++.+--+.|-.+|.-...-|++++++++|+..+.+|.||||+.| +|-.-|++
T Consensus       364 KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ  443 (683)
T KOG0696|consen  364 KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ  443 (683)
T ss_pred             eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHH
Confidence            6788888899999999999764  23444666677888887655678999999999999999999999999 98877765


Q ss_pred             c
Q psy13291         88 V   88 (89)
Q Consensus        88 ~   88 (89)
                      +
T Consensus       444 ~  444 (683)
T KOG0696|consen  444 V  444 (683)
T ss_pred             h
Confidence            3

>KOG0666|consensus

Probab=98.34  E-value=1.1e-07  Score=63.88  Aligned_cols=77  Identities=8%  Similarity=0.067  Sum_probs=58.3

Q ss_pred             cceeEEEccCCC----EEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPD----SEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~----~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~sL~~~   84 (89)
                      +|+.|....++-    .+|+|.+....+ +-......+|+.++.. +.|||++.+..+|.. +..+|+++||++.+|-++
T Consensus        39 ~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~RE-l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~I  117 (438)
T KOG0666|consen   39 KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRE-LKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHI  117 (438)
T ss_pred             eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHH-hcCCcchhHHHHHhccCceEEEEehhhhhhHHHH
Confidence            466665444442    689999976422 1234567789999766 699999999999987 679999999999998888


Q ss_pred             Hhhc
Q psy13291         85 YTKV   88 (89)
Q Consensus        85 l~~~   88 (89)
                      |+-+
T Consensus       118 I~fH  121 (438)
T KOG0666|consen  118 IKFH  121 (438)
T ss_pred             HHHh
Confidence            8754

>KOG3653|consensus

Probab=98.30  E-value=1.3e-06  Score=61.18  Aligned_cols=67  Identities=21%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHh-cCCCCceeeEEeEEEECC----EEEEEecchhc-cHHHHHhhc
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMR-SSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~-~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ..+++.||||+++.    ...+.+..|-.|..- ...|+||++|+++-...+    .+|||+||-+. ||.++|+.+
T Consensus       230 qL~~~~VAVKifp~----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n  302 (534)
T KOG3653|consen  230 QLDNRLVAVKIFPE----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN  302 (534)
T ss_pred             hccCceeEEEecCH----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc
Confidence            45789999999973    346778888888654 238999999998877765    89999999999 999999764

>KOG1152|consensus

Probab=98.21  E-value=1.2e-06  Score=62.84  Aligned_cols=76  Identities=12%  Similarity=0.072  Sum_probs=60.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC---CH----HHHHHHHHHHHHHHhcCC---CCceeeEEeEEEECCEEEEEecchh-c
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV---NT----QEHKRLLTDLDICMRSSD---CAHTVQFYGAMFREGDVWICMEVMD-T   79 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~---~~----~~~~~~~~E~~il~~~~~---hpniv~~~~~~~~~~~~~iv~E~~~-~   79 (89)
                      +|.+|.+......|.+|.|....   +.    ....++..|++||+.+ +   |+||+++.+.|.+++++||.||-=. |
T Consensus       576 kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlLdfFEddd~yyl~te~hg~g  654 (772)
T KOG1152|consen  576 KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLLDFFEDDDYYYLETEVHGEG  654 (772)
T ss_pred             eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhhheeecCCeeEEEecCCCCC
Confidence            68899999999999999997531   11    1234578999999874 5   9999999999999999999999433 4


Q ss_pred             -cHHHHHhh
Q psy13291         80 -SLDKFYTK   87 (89)
Q Consensus        80 -sL~~~l~~   87 (89)
                       +|-++|..
T Consensus       655 IDLFd~IE~  663 (772)
T KOG1152|consen  655 IDLFDFIEF  663 (772)
T ss_pred             cchhhhhhc
Confidence             77777653

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.20  E-value=9.7e-06  Score=52.40  Aligned_cols=73  Identities=11%  Similarity=-0.058  Sum_probs=52.9

Q ss_pred             ccceeEEEccCCCEEEEEEEeecC--CHHHHHH------HHHHHHHHHhcCCCCceeeEEeEEEEC--------CEEEEE
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTV--NTQEHKR------LLTDLDICMRSSDCAHTVQFYGAMFRE--------GDVWIC   73 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~------~~~E~~il~~~~~hpniv~~~~~~~~~--------~~~~iv   73 (89)
                      .+|.++..  ++..+|+|.+....  .....+.      +.+|+..+.++ .||+|....+.+...        +..+|+
T Consensus        45 ~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~~~~~~~~~~~~~~~lv  121 (232)
T PRK10359         45 TKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYLLAERKTLRYAHTYIML  121 (232)
T ss_pred             eEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeeeecccccccccCCeEEE
Confidence            45666543  57789999997532  2222233      56888888885 999999998886643        358999


Q ss_pred             ecchhc-cHHHHH
Q psy13291         74 MEVMDT-SLDKFY   85 (89)
Q Consensus        74 ~E~~~~-sL~~~l   85 (89)
                      |||++| +|.++.
T Consensus       122 mEyi~G~tL~~~~  134 (232)
T PRK10359        122 IEYIEGVELNDMP  134 (232)
T ss_pred             EEEECCccHHHhh
Confidence            999999 997763

>KOG2345|consensus

Probab=98.16  E-value=8e-07  Score=58.07  Aligned_cols=76  Identities=11%  Similarity=0.084  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+|+.+..++..||+|+|.-.. .+..+..++|++...+ ++|||++++++....+     ..+||+++|-.- ||.+.
T Consensus        36 fv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rk-f~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~  113 (302)
T KOG2345|consen   36 FVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRK-FNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDE  113 (302)
T ss_pred             eeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHh-hCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHH
Confidence            57888899999999999997654 3457888999999655 7999999998755432     369999998887 88888


Q ss_pred             Hhhc
Q psy13291         85 YTKV   88 (89)
Q Consensus        85 l~~~   88 (89)
                      ++..
T Consensus       114 i~~~  117 (302)
T KOG2345|consen  114 IERL  117 (302)
T ss_pred             HHHH
Confidence            7653

>KOG0608|consensus

Probab=98.14  E-value=2.3e-06  Score=62.27  Aligned_cols=76  Identities=9%  Similarity=0.076  Sum_probs=60.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+|+.-..|...||.|.+...  ...+....+..|-.||... +.+-||++|-+|.+.+.+|+||||++| ++-.+|-+
T Consensus       644 eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIr  722 (1034)
T KOG0608|consen  644 EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR  722 (1034)
T ss_pred             eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEEeccCCccHHHHHHH
Confidence            4667766678888888888653  1223455677899999874 999999999999999999999999999 98887643

>PTZ00284 protein kinase; Provisional

Probab=98.12  E-value=3.6e-05  Score=53.64  Aligned_cols=74  Identities=11%  Similarity=0.021  Sum_probs=51.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhc-----CCCCceeeEEeEEEEC-CEEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRS-----SDCAHTVQFYGAMFRE-GDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~-----~~hpniv~~~~~~~~~-~~~~iv~E~~~~sL~~~   84 (89)
                      .|++|.+..++..||+|++....  ........|+.++..+     .+|++++.++++|..+ +.+|++||++.++|.++
T Consensus       144 ~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~  221 (467)
T PTZ00284        144 KVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDW  221 (467)
T ss_pred             EEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccCCCHHHH
Confidence            57788888899999999996431  1233345566665542     2456688888888764 58999999987666665


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus       222 l~  223 (467)
T PTZ00284        222 IM  223 (467)
T ss_pred             HH
Confidence            54

>KOG0193|consensus

Probab=98.09  E-value=8.2e-06  Score=58.65  Aligned_cols=62  Identities=10%  Similarity=0.075  Sum_probs=54.6

Q ss_pred             EEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         23 SEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        23 ~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .||||.+... .+++..+.|..|+..|.+. .|.||+=|.|++..++. .||..||+| ||..+|.
T Consensus       416 dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlH  479 (678)
T KOG0193|consen  416 DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLH  479 (678)
T ss_pred             ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeeehhccCchhhhhcc
Confidence            4799999864 5666789999999999885 99999999999998887 999999999 9998875

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.06  E-value=2.8e-05  Score=48.49  Aligned_cols=73  Identities=14%  Similarity=-0.050  Sum_probs=53.0

Q ss_pred             ceeEEEccCCCEEEEEEEeecC--CH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTV--NT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~--~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      |+.+..  .|..+++|......  ..     .....+.+|+.++..+ .|+++......+...+..+++|||++| +|.+
T Consensus        12 vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~   88 (211)
T PRK14879         12 IYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVMEYIEGEPLKD   88 (211)
T ss_pred             EEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHH
Confidence            455543  78889999865321  11     1234577899998874 788887777777777889999999999 9998


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus        89 ~~~~   92 (211)
T PRK14879         89 LINS   92 (211)
T ss_pred             HHHh
Confidence            8754

>KOG0668|consensus

Probab=98.06  E-value=5.3e-06  Score=54.11  Aligned_cols=71  Identities=7%  Similarity=0.106  Sum_probs=57.4

Q ss_pred             eeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHHHhh
Q psy13291         13 ELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        13 ~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .-+.+..+++.++||++..    -....+.+|+.||.-+.+||||+.+++...++.  .+.+++||.++ ++..+...
T Consensus        55 Feg~~~~~~eK~ViKiLKP----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t  128 (338)
T KOG0668|consen   55 FEGINITNNEKCVIKILKP----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT  128 (338)
T ss_pred             hcccccCCCceEEEeeech----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh
Confidence            3445557888899998863    345678899999999889999999999998864  68899999999 88777643

>KOG1025|consensus

Probab=98.06  E-value=1.4e-06  Score=64.65  Aligned_cols=65  Identities=9%  Similarity=0.022  Sum_probs=54.9

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ..||+|++...........++.|.-+|.+ ++|||++++.|.+.... +.|+++||++ +|.++++.+
T Consensus       726 ipVaiKvl~~~t~~~~s~e~LdeAl~mas-ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~h  791 (1177)
T KOG1025|consen  726 IPVAIKVLIEFTSPKASIELLDEALRMAS-LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREH  791 (1177)
T ss_pred             ceeEEEEeeccCCchhhHHHHHHHHHHhc-CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHh
Confidence            46899999766555567789999999887 59999999999887766 8999999999 999998764

>KOG1345|consensus

Probab=98.05  E-value=2.3e-06  Score=56.85  Aligned_cols=73  Identities=12%  Similarity=0.028  Sum_probs=59.5

Q ss_pred             ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEE-eEEEECCEEEEEecchhc-cHHHH
Q psy13291         10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFY-GAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~-~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      -|+-||.|+.+++.+++|.++....  ...+|.+|...--.+..|.||+.-| ..|...+.+..++||++. +|.+-
T Consensus        38 gkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~sn  112 (378)
T KOG1345|consen   38 GKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSN  112 (378)
T ss_pred             eeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhh
Confidence            3688999999999999999975433  3778889988755666899999976 567778889999999998 88653

>KOG1167|consensus

Probab=98.05  E-value=6.4e-06  Score=56.71  Aligned_cols=66  Identities=15%  Similarity=0.241  Sum_probs=57.8

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .++.+|+|.+..+..   ...+..|+++|..+.++.||+.+.+++..++.+.++|||.+. +..+++...
T Consensus        63 ~~~~valk~i~~ts~---p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~l  129 (418)
T KOG1167|consen   63 KRRYVALKAIYRTSS---PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRSL  129 (418)
T ss_pred             ccceEeeeecccccC---chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhcC
Confidence            677899999986543   345888999999999999999999999999999999999999 998888654

>KOG1290|consensus

Probab=98.01  E-value=6.1e-05  Score=53.34  Aligned_cols=75  Identities=12%  Similarity=0.069  Sum_probs=59.3

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-------CceeeEEeEEEEC----CEEEEEecchhcc
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-------AHTVQFYGAMFRE----GDVWICMEVMDTS   80 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-------pniv~~~~~~~~~----~~~~iv~E~~~~s   80 (89)
                      |-||....+.+.||+|+...+  ....+..+.|+.+|++...+       .+||++++.|...    .++++|+|++..+
T Consensus        94 VWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdn  171 (590)
T KOG1290|consen   94 VWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDN  171 (590)
T ss_pred             eEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhH
Confidence            567888889999999999754  23467778899999875433       3799999999874    3899999999888


Q ss_pred             HHHHHhhc
Q psy13291         81 LDKFYTKV   88 (89)
Q Consensus        81 L~~~l~~~   88 (89)
                      |-.+|++.
T Consensus       172 LLklI~~s  179 (590)
T KOG1290|consen  172 LLKLIKYS  179 (590)
T ss_pred             HHHHHHHh
Confidence            88888764

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.96  E-value=2.3e-05  Score=48.96  Aligned_cols=69  Identities=6%  Similarity=-0.070  Sum_probs=42.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HH------------------------HHHHHHHHHHHHhcCCCCceeeEEeEEE
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QE------------------------HKRLLTDLDICMRSSDCAHTVQFYGAMF   65 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~------------------------~~~~~~E~~il~~~~~hpniv~~~~~~~   65 (89)
                      .|++|... +|+.+|+|++...... ..                        ......|..+|..+ .++++........
T Consensus        12 ~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~v~~p~~~~~   89 (190)
T cd05147          12 NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTAGIPCPEPILL   89 (190)
T ss_pred             EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCcEEEe
Confidence            47788776 8999999999753210 00                        11234588888875 5665533222222


Q ss_pred             ECCEEEEEecchhc-cHHH
Q psy13291         66 REGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        66 ~~~~~~iv~E~~~~-sL~~   83 (89)
                       . ..+|+|||++| ++..
T Consensus        90 -~-~~~iVmE~i~g~~l~~  106 (190)
T cd05147          90 -K-SHVLVMEFIGDDGWAA  106 (190)
T ss_pred             -c-CCEEEEEEeCCCCCcc
Confidence             2 23899999998 6644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0603|consensus

Probab=97.92  E-value=6.3e-06  Score=59.14  Aligned_cols=71  Identities=11%  Similarity=0.105  Sum_probs=56.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc--cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT--SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~~~l~   86 (89)
                      .+..+.+..+++..++|++.....     +...|+.++....+|||++.+++.+..+-+.|+|||++.|  .|+.+..
T Consensus       337 ~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~  409 (612)
T KOG0603|consen  337 AVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRS  409 (612)
T ss_pred             ceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHh
Confidence            456778889999999999976522     2334676766667999999999999999999999999999  5665543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.86  E-value=9.2e-05  Score=45.79  Aligned_cols=73  Identities=12%  Similarity=-0.048  Sum_probs=49.9

Q ss_pred             ceeEEEccCCCEEEEEEEeecC--C-H----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTV--N-T----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~--~-~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      |+.+.  .+|..+++|......  . .    ....++.+|+.++..+ .|+++......+...+..+++|||++| +|.+
T Consensus        10 vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~   86 (199)
T TIGR03724        10 IYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKD   86 (199)
T ss_pred             EEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEEEECCccHHH
Confidence            55554  577889999865321  1 1    1235677899998774 676655544455566778999999999 9988


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus        87 ~~~~   90 (199)
T TIGR03724        87 VIEE   90 (199)
T ss_pred             HHhh
Confidence            7653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.84  E-value=9.2e-05  Score=52.30  Aligned_cols=48  Identities=13%  Similarity=0.152  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         37 EHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        37 ~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      ....+.+|+.+|.. ++||||+++++++..++..|+++|++.+++.+++
T Consensus       206 ~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l  253 (501)
T PHA03210        206 AAIQLENEILALGR-LNHENILKIEEILRSEANTYMITQKYDFDLYSFM  253 (501)
T ss_pred             HHHHHHHHHHHHHh-CCCCCcCcEeEEEEECCeeEEEEeccccCHHHHH
Confidence            34567899999888 5999999999999999999999999987444443

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.76  E-value=0.00021  Score=44.35  Aligned_cols=68  Identities=7%  Similarity=-0.134  Sum_probs=44.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-------------------------HHHHHHHHHHHHHHhcCCCCceeeEEeEEE
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-------------------------QEHKRLLTDLDICMRSSDCAHTVQFYGAMF   65 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-------------------------~~~~~~~~E~~il~~~~~hpniv~~~~~~~   65 (89)
                      .|++|... +|+.||+|++......                         .....+..|...+.++ .|+++........
T Consensus        12 ~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~   89 (190)
T cd05145          12 NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEAGVPVPEPILL   89 (190)
T ss_pred             EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhCCCCCceEEEe
Confidence            47778776 8999999999753211                         0012235788888774 7887644433333


Q ss_pred             ECCEEEEEecchhc-cHH
Q psy13291         66 REGDVWICMEVMDT-SLD   82 (89)
Q Consensus        66 ~~~~~~iv~E~~~~-sL~   82 (89)
                      ..  .|++|||++| ++.
T Consensus        90 ~~--~~lVmE~~~g~~~~  105 (190)
T cd05145          90 KK--NVLVMEFIGDDGSP  105 (190)
T ss_pred             cC--CEEEEEEecCCCch
Confidence            22  4899999998 543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0614|consensus

Probab=97.75  E-value=1.1e-06  Score=62.35  Aligned_cols=76  Identities=16%  Similarity=0.159  Sum_probs=63.7

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|+|+........+|+|+++..  .+....+.+..|-.||+.+ ..|+|+++|-+|.++.++|++||-|-| .+=.+++.
T Consensus       435 RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrd  513 (732)
T KOG0614|consen  435 RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRD  513 (732)
T ss_pred             eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhh
Confidence            5778877666667899999753  4556677899999999884 899999999999999999999999999 88777764

>KOG0665|consensus

Probab=97.74  E-value=6.9e-06  Score=55.29  Aligned_cols=71  Identities=14%  Similarity=0.217  Sum_probs=53.4

Q ss_pred             EEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHHHHh
Q psy13291         15 GLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        15 ~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~~l~   86 (89)
                      |...-+++.+|+|.+... .+.....+..+|..++.. ..|+|+++++.+|..+.      .+|++||||+.+|..++.
T Consensus        35 a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~-v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~  112 (369)
T KOG0665|consen   35 AFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKC-VNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL  112 (369)
T ss_pred             cchhhccCceehhhhcCccccCccchhhhhhhhhhhh-hcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH
Confidence            334457788999988643 222345677889988665 69999999999998753      799999999997776653

>KOG1163|consensus

Probab=97.53  E-value=0.00028  Score=46.51  Aligned_cols=73  Identities=11%  Similarity=0.048  Sum_probs=58.2

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      ++++.+..+|+.||||.-...+.   .-++..|..+...+.+.+.|..+..+....++-.+|||++..||++++.-
T Consensus        31 Iy~~~~i~~ge~VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnf  103 (341)
T KOG1163|consen   31 IYLGISITSGEEVAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNF  103 (341)
T ss_pred             eeeeeeccCCceEEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHHHHH
Confidence            57888889999999998765432   23566788887776677788888888888889999999998899998764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.53  E-value=0.00025  Score=40.98  Aligned_cols=60  Identities=10%  Similarity=-0.026  Sum_probs=45.2

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .+..+++|.......   ...+..|+.++..+.++ ++++++++.+..++..|++|||++| ++.
T Consensus        20 ~~~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120          20 KDEDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             cCCeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            346789998864332   45677888888775333 6888988888878899999999998 664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.41  E-value=0.0017  Score=46.33  Aligned_cols=48  Identities=13%  Similarity=0.011  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         38 HKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        38 ~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .+.+.+|+.++.. ..|++++.....+..++..+++|||++| +|.+++.
T Consensus       380 ~~~~~~E~~~l~~-l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        380 TERTRAEARLLSE-ARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             HHHHHHHHHHHHh-hcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH
Confidence            3568899999887 4899998877777777788999999999 9998763

>KOG0670|consensus

Probab=97.36  E-value=0.00021  Score=51.35  Aligned_cols=72  Identities=15%  Similarity=0.162  Sum_probs=56.2

Q ss_pred             EEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCC-----CCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291         15 GLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSD-----CAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        15 ~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~-----hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~   88 (89)
                      |.....|..||||+|..+  ......-+.|++||.++..     --|+++++..|...+++|+|+|-+.-+|-++|++.
T Consensus       451 a~D~~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKy  527 (752)
T KOG0670|consen  451 ARDQARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKY  527 (752)
T ss_pred             ccccCCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHh
Confidence            334456778999999743  3446677899999988542     34899999999999999999997777888888763

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.36  E-value=0.0016  Score=41.86  Aligned_cols=62  Identities=2%  Similarity=-0.236  Sum_probs=44.0

Q ss_pred             CCCEEEEEEEeecCCH---HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         20 DPDSEWSFRITFTVNT---QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~---~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .+..++.+.+....-.   .....+.+|+++|.++.+|++++++++.    +..+++|||+.| +|.+.+
T Consensus        24 ~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~   89 (218)
T PRK12274         24 GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRP   89 (218)
T ss_pred             CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhh
Confidence            5666776666543221   1223578999999997677889998874    457999999999 887543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.23  E-value=0.0061  Score=38.49  Aligned_cols=65  Identities=22%  Similarity=0.359  Sum_probs=51.3

Q ss_pred             CEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCC-ceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         22 DSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCA-HTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        22 ~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hp-niv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+|+|.+......  .....+.+|..++..+ .|+ +++.+++.+...+..+++++|+.+ ++.+++..
T Consensus        23 ~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   91 (384)
T COG0515          23 KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKK   91 (384)
T ss_pred             cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHh
Confidence            66788888754322  2477889999998885 555 899999999778889999999999 88876653

>KOG0195|consensus

Probab=97.20  E-value=3.8e-05  Score=51.38  Aligned_cols=70  Identities=11%  Similarity=0.067  Sum_probs=54.4

Q ss_pred             EccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         17 ARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        17 ~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .++.|..+++|++... ......++|..|..-|.- +.||||....|++.++..+.++..||+. ||..+|..
T Consensus       209 grwqgndivakil~vr~~t~risrdfneefp~lri-fshpnilpvlgacnsppnlv~isq~mp~gslynvlhe  280 (448)
T KOG0195|consen  209 GRWQGNDIVAKILNVREVTARISRDFNEEFPALRI-FSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHE  280 (448)
T ss_pred             ccccCcchhhhhhhhhhcchhhcchhhhhCcceee-ecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhc
Confidence            3455666777877642 333445678888888654 6999999999999999999999999999 99988854

>KOG0669|consensus

Probab=97.20  E-value=7e-06  Score=54.22  Aligned_cols=75  Identities=5%  Similarity=0.014  Sum_probs=54.7

Q ss_pred             ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--------CCEEEEEecchhccHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--------EGDVWICMEVMDTSLD   82 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--------~~~~~iv~E~~~~sL~   82 (89)
                      |.+|.++.+|+.||+|.+-..+ ......+.++|+.+|.. +.|+|++.+...+..        ...+|+|+++|+.+|.
T Consensus        33 VFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~-lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLa  111 (376)
T KOG0669|consen   33 VFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLA  111 (376)
T ss_pred             HHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHH-hcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHH
Confidence            4566777888889998774321 22234567889999987 599999888765543        2369999999999887


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      .+|..
T Consensus       112 GlLsn  116 (376)
T KOG0669|consen  112 GLLSN  116 (376)
T ss_pred             HHhcC
Confidence            77643

>smart00090 RIO RIO-like kinase

Probab=97.16  E-value=0.0021  Score=41.49  Aligned_cols=69  Identities=7%  Similarity=-0.192  Sum_probs=44.5

Q ss_pred             cceeEE-EccCCCEEEEEEEeecCCH---------------------H--HHHHHHHHHHHHHhcCCC--CceeeEEeEE
Q psy13291         11 KPELGL-ARLDPDSEWSFRITFTVNT---------------------Q--EHKRLLTDLDICMRSSDC--AHTVQFYGAM   64 (89)
Q Consensus        11 ~~~l~~-~~~~~~~~AvK~i~~~~~~---------------------~--~~~~~~~E~~il~~~~~h--pniv~~~~~~   64 (89)
                      .|+.|. +..+|+.+|+|.+......                     .  ....+..|..++..+ .+  ..++..++. 
T Consensus        43 ~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L-~~~~i~~p~~~~~-  120 (237)
T smart00090       43 NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL-YEAGVPVPKPIAW-  120 (237)
T ss_pred             eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-HhcCCCCCeeeEe-
Confidence            467777 6679999999999753210                     0  112356899998886 33  233444432 


Q ss_pred             EECCEEEEEecchhc-cHHHH
Q psy13291         65 FREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        65 ~~~~~~~iv~E~~~~-sL~~~   84 (89)
                         +..+++|||++| ++...
T Consensus       121 ---~~~~lV~E~~~g~~L~~~  138 (237)
T smart00090      121 ---RRNVLVMEFIGGDGLPAP  138 (237)
T ss_pred             ---cCceEEEEEecCCccccc
Confidence               235899999999 77543

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.08  E-value=0.00042  Score=49.72  Aligned_cols=20  Identities=0%  Similarity=-0.248  Sum_probs=15.8

Q ss_pred             ceeEEEccCCCEEEEEEEee
Q psy13291         12 PELGLARLDPDSEWSFRITF   31 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~   31 (89)
                      |..|....+|+.||||++..
T Consensus       135 Vh~A~l~~~G~~VAVKV~rP  154 (537)
T PRK04750        135 VHFARLKDNGREVVVKVLRP  154 (537)
T ss_pred             EEEEEECCCCCEEEEEEeCc
Confidence            45666666799999999964

>KOG0986|consensus

Probab=97.08  E-value=0.00023  Score=50.30  Aligned_cols=71  Identities=10%  Similarity=0.011  Sum_probs=54.3

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      |+-|.-+.||.-+|.|.+......  .--.-.+.|-.||++ .+.|+||.+--+|.+.+.+++||..|+| +|.-
T Consensus       201 V~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~k-V~s~FiVslaYAfeTkd~LClVLtlMNGGDLkf  274 (591)
T KOG0986|consen  201 VCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEK-VSSPFIVSLAYAFETKDALCLVLTLMNGGDLKF  274 (591)
T ss_pred             eeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHH-hccCcEEEEeeeecCCCceEEEEEeecCCceeE
Confidence            455666778888888887642111  112235789999988 4999999999999999999999999999 8754

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.02  E-value=0.0025  Score=39.62  Aligned_cols=68  Identities=10%  Similarity=-0.094  Sum_probs=43.2

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCH---------------------HHHHHHHHHHHHHHhcCCCC--ceeeEEeEEEECC
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNT---------------------QEHKRLLTDLDICMRSSDCA--HTVQFYGAMFREG   68 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~---------------------~~~~~~~~E~~il~~~~~hp--niv~~~~~~~~~~   68 (89)
                      |+.+.. .+|+.+|+|.+......                     ........|..++..+ .|+  .++..++    .+
T Consensus        31 Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~v~~~~~----~~  104 (198)
T cd05144          31 VYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEGFPVPKPID----WN  104 (198)
T ss_pred             EEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcCCCCCceee----cC
Confidence            455554 37999999988643211                     0112356788887774 565  3444433    34


Q ss_pred             EEEEEecchhc-cHHHHH
Q psy13291         69 DVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        69 ~~~iv~E~~~~-sL~~~l   85 (89)
                      ..+++|||++| +|..+.
T Consensus       105 ~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144         105 RHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CceEEEEEeCCcchhhcc
Confidence            56899999999 887664

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=96.97  E-value=0.0024  Score=45.66  Aligned_cols=67  Identities=9%  Similarity=0.195  Sum_probs=42.1

Q ss_pred             cCCCEEEEEEEeecCCHHHHHH--------------HHHHHHHHHhcCCCCc-----eeeEEeEEEE--------CCEEE
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKR--------------LLTDLDICMRSSDCAH-----TVQFYGAMFR--------EGDVW   71 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~--------------~~~E~~il~~~~~hpn-----iv~~~~~~~~--------~~~~~   71 (89)
                      ..++.||+|.+...... ..++              ...|+.++..+ .|.+     ++++.+++..        .+..|
T Consensus       184 ~~~r~VAVK~l~~~~~~-~~~~fl~e~~~~~~~~e~~~vE~~~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~  261 (507)
T PLN03224        184 QKKRRVVLKRVNMDRQG-VRQDFLKTGTLAKGSAETGMVEAYMCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQW  261 (507)
T ss_pred             ccCceEEEEEecccchh-hHHHHHhhhhhhhcccchhHHHHHHHHHh-hcccchhhhhhhhhhhcccccccccccCCceE
Confidence            45578999998643221 1222              23456665554 4433     3556666543        35789


Q ss_pred             EEecchhc-cHHHHHhh
Q psy13291         72 ICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        72 iv~E~~~~-sL~~~l~~   87 (89)
                      +|+||+++ +|.+++..
T Consensus       262 LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        262 LVWKFESDATLGDALDG  278 (507)
T ss_pred             EEEEcCCCCcHHHHHhh
Confidence            99999999 99998863

>KOG0671|consensus

Probab=96.85  E-value=0.0015  Score=45.17  Aligned_cols=76  Identities=14%  Similarity=0.107  Sum_probs=55.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-C----ceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-A----HTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-p----niv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      +|.-|..+.++..+|+|+|..-  ....+..+.|+.+|.++..+ |    -++++.+.|...++++|++|.++.|+-+++
T Consensus       104 kV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFl  181 (415)
T KOG0671|consen  104 KVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFL  181 (415)
T ss_pred             ceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHh
Confidence            4556667778999999999743  23355667799998885322 2    255666778889999999999887777777


Q ss_pred             hhc
Q psy13291         86 TKV   88 (89)
Q Consensus        86 ~~~   88 (89)
                      +.+
T Consensus       182 k~N  184 (415)
T KOG0671|consen  182 KEN  184 (415)
T ss_pred             ccC
Confidence            654

>KOG1164|consensus

Probab=96.67  E-value=0.012  Score=39.40  Aligned_cols=75  Identities=11%  Similarity=0.062  Sum_probs=52.0

Q ss_pred             ceeEEEccCC-CEEEEEEEeecCCHHHHHHHHHHHHHHHhcC---CCCceeeEEeEE-EECCEEEEEecchhccHHHHHh
Q psy13291         12 PELGLARLDP-DSEWSFRITFTVNTQEHKRLLTDLDICMRSS---DCAHTVQFYGAM-FREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~~~-~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~---~hpniv~~~~~~-~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      |+++....++ ..+|+|........... .+..|..++..+.   +.+++..+++.+ ..+..-||||+++..||.++.+
T Consensus        34 V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~  112 (322)
T KOG1164|consen   34 VYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRK  112 (322)
T ss_pred             EEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHH
Confidence            4566655554 56888887754222112 5666788877654   346889999888 4778999999988779999875


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       113 ~  113 (322)
T KOG1164|consen  113 R  113 (322)
T ss_pred             h
Confidence            4

>KOG0664|consensus

Probab=96.45  E-value=0.00011  Score=49.24  Aligned_cols=71  Identities=10%  Similarity=0.134  Sum_probs=55.8

Q ss_pred             eEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHHH
Q psy13291         14 LGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKFY   85 (89)
Q Consensus        14 l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~l   85 (89)
                      .+....+|+.+|+|.+..-. +.....++++|+..|.- +.|.|++...+....+.     ++|+++|+|..+|+.+|
T Consensus        71 sVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcf-FkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKII  147 (449)
T KOG0664|consen   71 SVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSS-FRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKII  147 (449)
T ss_pred             eccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHh-hccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhee
Confidence            44556789999999997532 23356789999999876 69999999988887753     68899999988887765

>KOG1243|consensus

Probab=96.27  E-value=0.012  Score=43.32  Aligned_cols=60  Identities=8%  Similarity=0.077  Sum_probs=46.9

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT   79 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~   79 (89)
                      +.++..+.+...+.... ...+...+-+.-|+. +.||||++|++++...+..||++|-+..
T Consensus        34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKt-lRHP~Il~yL~t~e~~~~~ylvTErV~P   93 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKT-LRHPNILSYLDTTEEEGTLYLVTERVRP   93 (690)
T ss_pred             eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhh-ccCchhhhhhhhhcccCceEEEeecccc
Confidence            44677888888876544 345556667777666 5999999999999999999999997765

>KOG1165|consensus

Probab=96.21  E-value=0.012  Score=40.52  Aligned_cols=73  Identities=10%  Similarity=-0.008  Sum_probs=52.5

Q ss_pred             eeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291         13 ELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV   88 (89)
Q Consensus        13 ~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~   88 (89)
                      .++.+..+++.||||.-+....   .-++.-|-.....+.+.++|.+.|-....+-+-.+|||++..||++++..+
T Consensus        45 f~G~Nl~nne~VAIKfEPrkS~---APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~C  117 (449)
T KOG1165|consen   45 FLGKNLYNNEPVAIKFEPRKSE---APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLC  117 (449)
T ss_pred             ecccccccCceEEEEeccccCC---cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHh
Confidence            3455667899999997765322   223445666666666889998876555556678899999888999998654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.18  E-value=0.0053  Score=38.08  Aligned_cols=64  Identities=9%  Similarity=-0.048  Sum_probs=40.8

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCC-CCceeeEEeEEEEC---CEEEEEecchhc-cHHHH
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSD-CAHTVQFYGAMFRE---GDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~-hpniv~~~~~~~~~---~~~~iv~E~~~~-sL~~~   84 (89)
                      |..+++|.............+..|..++..+.. +.++.+++......   +..|++|||++| ++.+.
T Consensus        22 g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~   90 (223)
T cd05154          22 GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDR   90 (223)
T ss_pred             CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCC
Confidence            578899987543221124467788888877433 23455565554443   367899999999 77654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741|consensus

Probab=96.03  E-value=0.014  Score=42.28  Aligned_cols=72  Identities=8%  Similarity=0.082  Sum_probs=50.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc--cHHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT--SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~--sL~~~l   85 (89)
                      .+.+-+..+|..|++|++....+. .......-++.+++ +.|+|+|.|.++|..    ...+.++.+|.++  +|.++.
T Consensus       292 tyk~~s~~DG~~YvLkRlhg~r~~-~~nk~t~lve~wkk-l~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  292 TYKATSNVDGNAYVLKRLHGDRDQ-STNKDTSLVEAWKK-LCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             eEeeeeccCCceeeeeeecccccc-CcccchHHHHHHHH-hccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            355667788999999999432211 11122234567777 499999999998874    3479999999998  777653

>PHA02882 putative serine/threonine kinase; Provisional

Probab=95.87  E-value=0.14  Score=33.38  Aligned_cols=75  Identities=9%  Similarity=-0.020  Sum_probs=43.4

Q ss_pred             cceeEEEccC---CCEEEEEEEeecCCHHHHH----------HHHHHHHHHHhcCCCCceeeEEeEEEECC----EEEEE
Q psy13291         11 KPELGLARLD---PDSEWSFRITFTVNTQEHK----------RLLTDLDICMRSSDCAHTVQFYGAMFREG----DVWIC   73 (89)
Q Consensus        11 ~~~l~~~~~~---~~~~AvK~i~~~~~~~~~~----------~~~~E~~il~~~~~hpniv~~~~~~~~~~----~~~iv   73 (89)
                      .|+.|....+   +..+|+|...........+          ....+...+.. ..|+|++++++++....    ..+++
T Consensus        27 ~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~h~~i~~~~~~~~~~~~~~~~~~~~  105 (294)
T PHA02882         27 CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHN-IDHLGIPKYYGCGSFKRCRMYYRFIL  105 (294)
T ss_pred             eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhcc-CCCCCCCcEEEeeeEecCCceEEEEE
Confidence            4667776666   5667777654322211111          11222333333 58999999999876643    45788


Q ss_pred             ecchhccHHHHHh
Q psy13291         74 MEVMDTSLDKFYT   86 (89)
Q Consensus        74 ~E~~~~sL~~~l~   86 (89)
                      +|++..++.+++.
T Consensus       106 ~~~~~~~~~~~~~  118 (294)
T PHA02882        106 LEKLVENTKEIFK  118 (294)
T ss_pred             EehhccCHHHHHH
Confidence            8887665555543

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.86  E-value=0.025  Score=39.71  Aligned_cols=20  Identities=20%  Similarity=0.283  Sum_probs=15.8

Q ss_pred             CCEEEEEecchhc-cHHHHHh
Q psy13291         67 EGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        67 ~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .+..+|+|||++| +|.++..
T Consensus       230 ~~~~vLvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       230 TSERVLTMEWIDGIPLSDIAA  250 (437)
T ss_pred             cCCceEEEEeECCcccccHHH
Confidence            3457899999999 8887653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=95.80  E-value=0.12  Score=33.46  Aligned_cols=67  Identities=12%  Similarity=-0.031  Sum_probs=43.3

Q ss_pred             CCCEEEEEEEeecC------------CHHHHHHHHHHHHHHHhcCCCCce--eeEEeEEEEC-C---EEEEEecchhc--
Q psy13291         20 DPDSEWSFRITFTV------------NTQEHKRLLTDLDICMRSSDCAHT--VQFYGAMFRE-G---DVWICMEVMDT--   79 (89)
Q Consensus        20 ~~~~~AvK~i~~~~------------~~~~~~~~~~E~~il~~~~~hpni--v~~~~~~~~~-~---~~~iv~E~~~~--   79 (89)
                      .+..+++|......            +......+.+|+.++..+ .|+++  +..++..... .   ..+++|||++|  
T Consensus        54 ~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~  132 (239)
T PRK01723         54 PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVVRHGLFYRADILIERIEGAR  132 (239)
T ss_pred             CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeeeecCcceeeeEEEEecCCCC
Confidence            36678888775311            112235678899998874 77664  6666554332 2   34699999996  


Q ss_pred             cHHHHHhh
Q psy13291         80 SLDKFYTK   87 (89)
Q Consensus        80 sL~~~l~~   87 (89)
                      +|.+++..
T Consensus       133 ~L~~~l~~  140 (239)
T PRK01723        133 DLVALLQE  140 (239)
T ss_pred             CHHHHHhc
Confidence            88887754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=95.60  E-value=0.035  Score=40.18  Aligned_cols=71  Identities=8%  Similarity=0.001  Sum_probs=41.5

Q ss_pred             cceeEEEccC----CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeE------EEECCEEEEEecchhc-
Q psy13291         11 KPELGLARLD----PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGA------MFREGDVWICMEVMDT-   79 (89)
Q Consensus        11 ~~~l~~~~~~----~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~------~~~~~~~~iv~E~~~~-   79 (89)
                      .|+++....+    +..+|+|.+......   +....| .+ ... .+.++..+...      ...++..|+++||+++ 
T Consensus       147 ~VYka~~~~~~~~~~~~vAvK~~~~~~~~---e~~~~e-~l-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~g  220 (566)
T PLN03225        147 VVYKASLVNKQSKKEGKYVLKKATEYGAV---EIWMNE-RV-RRA-CPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGES  220 (566)
T ss_pred             EEEEEEEcCCccccCcEEEEEEecccchh---HHHHHH-HH-Hhh-chhhHHHHHHhhhcccccccCCceEEEEEecCCC
Confidence            4778888788    899999988643221   111111 11 111 22222222211      1345689999999999 


Q ss_pred             cHHHHHhh
Q psy13291         80 SLDKFYTK   87 (89)
Q Consensus        80 sL~~~l~~   87 (89)
                      +|.+++..
T Consensus       221 sL~~~l~~  228 (566)
T PLN03225        221 TLADLMQS  228 (566)
T ss_pred             cHHHHHHh
Confidence            99988764

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.47  E-value=0.031  Score=33.36  Aligned_cols=59  Identities=5%  Similarity=-0.146  Sum_probs=35.8

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .+..+++|........  ...+..|..++..+.+...+.++++..  .+.-+++|||++| ++.
T Consensus        20 ~~~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~   79 (170)
T cd05151          20 ANKKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL   79 (170)
T ss_pred             CCeEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence            4778999987543211  223456788877643333344455443  3345799999999 775

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.05  E-value=0.16  Score=32.43  Aligned_cols=60  Identities=5%  Similarity=-0.047  Sum_probs=40.8

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      +..+.+|..+...    ..++..|+.++..+..+-.+.++++....++..+++||+++| ++...
T Consensus        22 ~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          22 NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            3567777665321    234566888876654444566677777666778999999999 88754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05119 RIO RIO kinase family, catalytic domain

Probab=94.64  E-value=0.15  Score=31.02  Aligned_cols=20  Identities=15%  Similarity=-0.095  Sum_probs=15.3

Q ss_pred             cceeEEEccCCCEEEEEEEee
Q psy13291         11 KPELGLARLDPDSEWSFRITF   31 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~   31 (89)
                      .|+.+... +|+.+|+|++..
T Consensus        12 ~Vy~a~~~-~~~~vavKv~~~   31 (187)
T cd05119          12 DVYLALDG-DGEPVAVKIYRT   31 (187)
T ss_pred             eEEEEECC-CCCEEEEEEEec
Confidence            46667655 799999999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PLN02876 acyl-CoA dehydrogenase

Probab=94.51  E-value=0.13  Score=38.82  Aligned_cols=59  Identities=8%  Similarity=0.027  Sum_probs=37.7

Q ss_pred             EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCce--eeEEeEEEEC---CEEEEEecchhc-cH
Q psy13291         23 SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHT--VQFYGAMFRE---GDVWICMEVMDT-SL   81 (89)
Q Consensus        23 ~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpni--v~~~~~~~~~---~~~~iv~E~~~~-sL   81 (89)
                      .+++++.+..........+.+|..+|..+..|+++  .+.++.+.+.   +..|++|||++| .+
T Consensus        67 ~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~  131 (822)
T PLN02876         67 RYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             eEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence            45666554322111234677899998775345554  6667666554   468999999999 64

>KOG1024|consensus

Probab=93.58  E-value=0.095  Score=37.08  Aligned_cols=60  Identities=8%  Similarity=0.112  Sum_probs=44.7

Q ss_pred             EEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291         27 FRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        27 K~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |.+..+++......++.|.-.|.. ..|||+.+..++... .+.+++++.++.. +|..+|+.
T Consensus       320 KTvk~~AS~iQv~~~L~es~lly~-~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~  381 (563)
T KOG1024|consen  320 KTVKQHASQIQVNLLLQESMLLYG-ASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQI  381 (563)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHhc-CcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHH
Confidence            333333344445667888888766 489999999988765 4689999999998 99999873

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=91.49  E-value=1  Score=28.63  Aligned_cols=62  Identities=16%  Similarity=-0.005  Sum_probs=41.5

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .+.|..+|+|.-..   +.....+..|..+|..+.+-....++|.+...    ++.|||++| .|.++-.
T Consensus        42 ~~~~~~~a~Kvrr~---ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~L~~~~~  104 (201)
T COG2112          42 EWRGGEVALKVRRR---DSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRPLGKLEI  104 (201)
T ss_pred             eccCceEEEEEecC---CcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcchhhhhh
Confidence            45777888886653   23356788899998875444444555544333    355999999 9887654

>KOG1023|consensus

Probab=91.19  E-value=0.22  Score=35.72  Aligned_cols=36  Identities=19%  Similarity=0.214  Sum_probs=33.7

Q ss_pred             CCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         52 SDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        52 ~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +.|.|+.+|+|.+..+....++-+||.. +|.+++..
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~   40 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN   40 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence            4899999999999999999999999999 99999865

>KOG1166|consensus

Probab=90.42  E-value=0.14  Score=39.54  Aligned_cols=71  Identities=6%  Similarity=-0.177  Sum_probs=48.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHH--HHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEH--KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~--~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      +||.|.+.. |+.+|+|.-......+..  .++..-+. +   .--|.|+.+..++..++.-++++||.+. ||.+++.
T Consensus       713 ~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~---~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N  786 (974)
T KOG1166|consen  713 SVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-P---QMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN  786 (974)
T ss_pred             EEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-h---hhhcchHHHHHHHccCCcceeeeeccccccHHHhhc
Confidence            467777666 999999988755444321  22221111 1   1235677777888888999999999999 9999875

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=89.41  E-value=0.85  Score=29.15  Aligned_cols=49  Identities=14%  Similarity=0.038  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         38 HKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        38 ~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ..+..+|..++.+.. --.|..-.-++.+++...|+|||.+| .|-+++..
T Consensus        43 r~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~   92 (204)
T COG3642          43 RERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEE   92 (204)
T ss_pred             HHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHh
Confidence            356778999988743 22333333445667888999999999 88877754

>KOG0603|consensus

Probab=88.04  E-value=0.078  Score=38.80  Aligned_cols=64  Identities=8%  Similarity=0.021  Sum_probs=47.2

Q ss_pred             ccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291         18 RLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SL   81 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL   81 (89)
                      ...|..+|.|....... .........|..++....+||++++++-.++.++..+++++|..| .+
T Consensus        19 ~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~l   84 (612)
T KOG0603|consen   19 ADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDL   84 (612)
T ss_pred             ccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchh
Confidence            35677889888865311 111114455777777766799999999999999999999999998 54

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=87.86  E-value=3.7  Score=28.91  Aligned_cols=61  Identities=13%  Similarity=-0.060  Sum_probs=37.1

Q ss_pred             CEEEEEEEeec----CC--HHHHHHHHHHHHHHHhcCCC--CceeeEEeEEEECCEEEEEecchhc--cHHHH
Q psy13291         22 DSEWSFRITFT----VN--TQEHKRLLTDLDICMRSSDC--AHTVQFYGAMFREGDVWICMEVMDT--SLDKF   84 (89)
Q Consensus        22 ~~~AvK~i~~~----~~--~~~~~~~~~E~~il~~~~~h--pniv~~~~~~~~~~~~~iv~E~~~~--sL~~~   84 (89)
                      +.+.||+-...    ..  ....++...|.+.|.....+  +++++.+.+  +++..+++|||+++  .+.+.
T Consensus        52 ~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lVME~L~~~~~lr~~  122 (401)
T PRK09550         52 KSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTVMEDLSDHKILRKG  122 (401)
T ss_pred             eEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEEEecCCCccHHHHH
Confidence            47899986421    11  11345667788887763322  346666554  44668899999998  45443

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=87.75  E-value=6.1  Score=26.16  Aligned_cols=69  Identities=14%  Similarity=-0.047  Sum_probs=39.5

Q ss_pred             EccCCCEEEEEEEeecCCHHHH----------HHHHHHHHHHHhcC--CCCceeeEEeEEEE-----CCEEEEEecchhc
Q psy13291         17 ARLDPDSEWSFRITFTVNTQEH----------KRLLTDLDICMRSS--DCAHTVQFYGAMFR-----EGDVWICMEVMDT   79 (89)
Q Consensus        17 ~~~~~~~~AvK~i~~~~~~~~~----------~~~~~E~~il~~~~--~hpniv~~~~~~~~-----~~~~~iv~E~~~~   79 (89)
                      ....|+.+.+|.-....-....          ..+.+|...+..+.  +.| ++...+++..     ....++++|++++
T Consensus        41 ~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIp-tP~pVa~~e~~~~~~~~~s~LVte~l~~  119 (268)
T PRK15123         41 FELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVD-TMTGVAFGERGSNPATRTSFIITEDLAP  119 (268)
T ss_pred             EEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCC-CCCeeEEEEecCCCccceeEEEEeeCCC
Confidence            3457788999976432211111          13567777766542  333 2222222222     2368899999999


Q ss_pred             --cHHHHHh
Q psy13291         80 --SLDKFYT   86 (89)
Q Consensus        80 --sL~~~l~   86 (89)
                        +|.+++.
T Consensus       120 ~~sL~~~~~  128 (268)
T PRK15123        120 TISLEDYCA  128 (268)
T ss_pred             CccHHHHHH
Confidence              8988875

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=87.42  E-value=4.9  Score=24.68  Aligned_cols=59  Identities=12%  Similarity=0.039  Sum_probs=37.7

Q ss_pred             CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEE---CCEEEEEecchhc-cHHH
Q psy13291         22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFR---EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~---~~~~~iv~E~~~~-sL~~   83 (89)
                      ..+++|.....   .....+..|..++..+..+ ..+.+++.....   ....+++|++++| ++..
T Consensus        21 ~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   21 GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            57888876532   3456677788887664333 235666654433   3468999999999 8776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=85.21  E-value=3.1  Score=26.63  Aligned_cols=56  Identities=7%  Similarity=-0.002  Sum_probs=36.9

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCC-ceeeEEeEEEECCEEEEEecchhc
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCA-HTVQFYGAMFREGDVWICMEVMDT   79 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hp-niv~~~~~~~~~~~~~iv~E~~~~   79 (89)
                      |..+++|.-.....   ...+.+|.+++..+.... .+.+.++.....+..+++||+++|
T Consensus        22 ~~~~VlR~~~~~~~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172        22 TGKWMLKLYNPGFD---KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             CCCEEEEeCCCCCC---HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            44566776653222   344677888877643332 256667777777788999999999

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0576|consensus

Probab=84.06  E-value=0.43  Score=35.82  Aligned_cols=38  Identities=16%  Similarity=0.285  Sum_probs=32.4

Q ss_pred             HHHHHHHHHhcCCCCc-eeeEEeEEEECCEEEEEecchhc
Q psy13291         41 LLTDLDICMRSSDCAH-TVQFYGAMFREGDVWICMEVMDT   79 (89)
Q Consensus        41 ~~~E~~il~~~~~hpn-iv~~~~~~~~~~~~~iv~E~~~~   79 (89)
                      ..-++++|.+ .+||| .+.+++.+..++..||.++++.+
T Consensus       280 ~rl~~eLLdK-~n~P~~~v~~~~d~~~E~~~~i~~~i~s~  318 (829)
T KOG0576|consen  280 RRLAIELLDK-VNNPNPVVRYLEDYDGEDYLWIPMRICST  318 (829)
T ss_pred             hHHHHHHHHH-ccCCCCcccccccCCcccccchhhhhhcC
Confidence            3447888888 59999 88888899999999999999986

>KOG3087|consensus

Probab=81.41  E-value=9.7  Score=24.70  Aligned_cols=71  Identities=10%  Similarity=0.005  Sum_probs=42.8

Q ss_pred             EEccCCCEEEEEEEee-c--C---CH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc--cHHHHHh
Q psy13291         16 LARLDPDSEWSFRITF-T--V---NT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT--SLDKFYT   86 (89)
Q Consensus        16 ~~~~~~~~~AvK~i~~-~--~---~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~~~l~   86 (89)
                      ....+|+.+.||.=.. .  .   +. -...+..+|...|.++. --.|.--.-.+.+...-.|.|||.+|  ++.+++.
T Consensus        25 ~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~  103 (229)
T KOG3087|consen   25 RGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFIL  103 (229)
T ss_pred             eeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeEEEEeccchhHHHHHHH
Confidence            3456788777775432 1  1   11 12456788999987742 22333323344556667899999999  7877765


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       104 ~  104 (229)
T KOG3087|consen  104 S  104 (229)
T ss_pred             H
Confidence            3

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=80.87  E-value=3.8  Score=25.80  Aligned_cols=56  Identities=13%  Similarity=0.033  Sum_probs=30.6

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      +..+.+|..... ... ..+..+|..++..+..+...++.++.+.  +  .+++||++| ++.
T Consensus        24 ~~~~vlR~~~~~-~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G~~l~   80 (235)
T cd05157          24 QDAVLVRVYGNK-TEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPGRTLE   80 (235)
T ss_pred             CCeEEEEEccCC-ccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCCCcCC
Confidence            456778855422 111 1122357777666434444455554332  2  489999999 753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	89
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-23
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-22
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-21
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-19
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-08

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/61 (75%), Positives = 51/61 (83%)
Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVN+QE KRLL DLDI MR+ DC  TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 83  RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQ 142
Query: 88  V 88
           V
Sbjct: 143 V 143

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 51/61 (83%)
Query: 28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
          RI  TVN+QE KRLL DLDI MR+ DC  TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 39 RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQ 98
Query: 88 V 88
          V
Sbjct: 99 V 99

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 48/61 (78%)
Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TVN+QE KRLL DLDI  R+ DC  TV FYGA+FREGDVWIC E+ DTSLDKFY +
Sbjct: 66  RIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQ 125
Query: 88  V 88
           V
Sbjct: 126 V 126

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 48/61 (78%)
Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TV+ +E K+LL DLD+ MRSSDC + VQFYGA+FREGD WICME+M TS DKFY  
Sbjct: 54  RIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKY 113
Query: 88  V 88
           V
Sbjct: 114 V 114

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 34  NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88
           N +E+KR+L DLD+ ++S DC + VQ +G      DV+I ME+M T  +K   ++
Sbjct: 63  NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRM 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	89
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-27
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-24
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-23
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 98.5 bits (246), Expect = 6e-27
 Identities = 46/61 (75%), Positives = 51/61 (83%)

Query: 28 RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
          RI  TVN+QE KRLL DLDI MR+ DC  TV FYGA+FREGDVWICME+MDTSLDKFY +
Sbjct: 39 RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQ 98

Query: 88 V 88
          V
Sbjct: 99 V 99

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 92.0 bits (229), Expect = 3e-24
 Identities = 41/61 (67%), Positives = 48/61 (78%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           RI  TV+ +E K+LL DLD+ MRSSDC + VQFYGA+FREGD WICME+M TS DKFY  
Sbjct: 54  RIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKY 113

Query: 88  V 88
           V
Sbjct: 114 V 114

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 89.0 bits (221), Expect = 4e-23
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87
           ++  + N +E+KR+L DLD+ ++S DC + VQ +G      DV+I ME+M T  +K   +
Sbjct: 57  QMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKR 116

Query: 88  V 88
           +
Sbjct: 117 M 117

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 79.1 bits (195), Expect = 3e-19
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86
            I   +      +++ +L + +   +  + V FYGA + +G++ ICME MD  SLD+   
Sbjct: 65  LIHLEIKPAIRNQIIRELQV-LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123

Query: 87  KV 88
           K 
Sbjct: 124 KA 125

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 49  MRSSDCAHTVQFYGAMFREGDVWICMEVMDTSL 81
           ++     +T+Q+ G   RE   W+ ME    S 
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA 140

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 49  MRSSDCAHTVQFYGAMFREGDVWICMEVMD 78
           M+  D  H V++YG+ F+  D+WI ME   
Sbjct: 78  MQQCDSPHVVKYYGSYFKNTDLWIVMEYCG 107

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 49 MRSSDCAHTVQFYGAMFREGDVWICMEVMD 78
          + + D  + V+  GA + +G +WI +E   
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 33  VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD 78
           +  Q  K L+ +  + MR +   + V +  +     ++W+ ME + 
Sbjct: 55  LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 49  MRSSDCAHTVQFYGAMFREGDVWICMEVMD 78
           MR     + V+ Y +     ++W+ ME + 
Sbjct: 96  MRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 7/30 (23%), Positives = 16/30 (53%)

Query: 49  MRSSDCAHTVQFYGAMFREGDVWICMEVMD 78
           +   D  +  ++YG+  ++  +WI ME + 
Sbjct: 74  LSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	89
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.73
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.7
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.7
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.68
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.67
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.66
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.65
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.64
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.62
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.61
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.55
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.54
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.54
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.52
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.45
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.44
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.44
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.43
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.43
3uqc_A	286	Probable conserved transmembrane protein; structur	99.43
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.42
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.42
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.41
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.4
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.4
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.4
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.4
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.39
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.39
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.37
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.37
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.37
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.36
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.36
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.35
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.35
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.35
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.35
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.35
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.34
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.34
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.34
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.34
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.34
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.33
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.33
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.33
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.32
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.32
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.32
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.32
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.32
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.32
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.32
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.32
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.31
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.31
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.31
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.31
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.31
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.31
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.31
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.31
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.31
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.31
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.31
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.3
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.3
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.3
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.3
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.3
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.3
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.3
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.3
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.3
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.29
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.29
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.29
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.29
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.29
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.29
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.29
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.28
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.28
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.28
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.28
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.27
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.27
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.27
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.27
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.27
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.27
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.27
3bhy_A	283	Death-associated protein kinase 3; death associate	99.27
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.26
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.26
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.26
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.26
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.26
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.26
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.26
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.25
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.25
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.25
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.25
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.25
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.24
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.24
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.24
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.24
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.24
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.24
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.23
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.23
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.23
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.23
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.23
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.22
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.22
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.22
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.22
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.22
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.21
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.21
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.21
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.21
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.21
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.21
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.21
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.21
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.21
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.21
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.2
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.2
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.2
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.2
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.2
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.2
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.2
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.2
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.2
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.19
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.19
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.19
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.19
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.19
3niz_A	311	Rhodanese family protein; structural genomics, str	99.19
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.18
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.17
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.17
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.17
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.17
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.16
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.16
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.15
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.15
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.15
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.12
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.11
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.11
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.1
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.1
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.1
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.1
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.08
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.07
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.07
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.06
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.03
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.02
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.02
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.02
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.02
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.01
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.01
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.01
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.01
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.01
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.01
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.99
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.98
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.98
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.98
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.95
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.94
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.93
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.91
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.91
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.9
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.87
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.86
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.86
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.86
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.84
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.83
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.78
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.78
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.77
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.77
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.77
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.75
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.72
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.71
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.69
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.67
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.67
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.63
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.6
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.59
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.57
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.21
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.81
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.25
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.04
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.86
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.13
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	94.77
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	92.88
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.86
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	89.67
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	88.21
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	87.36
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	86.27

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.73  E-value=5.8e-17  Score=108.31  Aligned_cols=76  Identities=16%  Similarity=0.178  Sum_probs=68.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||||++... .+....+.+.+|+.+|.. ++|||||+++++|..++.+|||||||+| +|.++|..
T Consensus        39 ~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~  116 (350)
T 4b9d_A           39 KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN-MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA  116 (350)
T ss_dssp             CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHH-CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHH
Confidence            5899999999999999999864 345567889999999988 5999999999999999999999999999 99999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.70  E-value=5.3e-17  Score=108.36  Aligned_cols=76  Identities=13%  Similarity=0.253  Sum_probs=65.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .|++|.++.+|+.||||+++..... ..+.+.+|+.+|.. ++|||||+++++|..++.+|||||||+| +|.+++++.
T Consensus        89 ~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~-l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~  165 (346)
T 4fih_A           89 IVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRD-YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT  165 (346)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCS-SGGGGHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS
T ss_pred             EEEEEEECCCCCEEEEEEEecCchh-HHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC
Confidence            5889999999999999999754222 24567899999988 5999999999999999999999999999 999998753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.70  E-value=9.6e-17  Score=109.50  Aligned_cols=76  Identities=13%  Similarity=0.253  Sum_probs=66.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      .|++|.++.+|+.||||++...... ..+.+.+|+.+|.. ++|||||+++++|..++.+|||||||+| +|.++++..
T Consensus       166 ~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~-l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~  242 (423)
T 4fie_A          166 IVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRD-YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT  242 (423)
T ss_dssp             EEEEEEETTTCCEEEEEEEESTTCS-SGGGHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS
T ss_pred             EEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHh-CCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc
Confidence            5889999999999999999854322 24568899999988 5999999999999999999999999999 999998753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.68  E-value=7.5e-17  Score=106.35  Aligned_cols=76  Identities=12%  Similarity=0.075  Sum_probs=66.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.++.+|+.||+|+++...  +....+.+.+|+.+|.. ++|||||+++++|.+++.+||+||||+| +|.+++++
T Consensus        47 ~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~  125 (311)
T 4aw0_A           47 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR-LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK  125 (311)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH
Confidence            58899999999999999997531  12235678999999887 5999999999999999999999999999 99999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.67  E-value=4.8e-16  Score=101.74  Aligned_cols=76  Identities=11%  Similarity=0.186  Sum_probs=66.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------------EEEEEecchh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------------DVWICMEVMD   78 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------------~~~iv~E~~~   78 (89)
                      .|++|.++.+|+.||+|.+.........+.+.+|+.+|.. ++|||||+++++|...+            .+||+||||+
T Consensus        20 ~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~-l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~   98 (299)
T 4g31_A           20 VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK-LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCR   98 (299)
T ss_dssp             EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEEEC----------CEEEEEEEECCC
T ss_pred             EEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCC
Confidence            5889999999999999999876666667789999999887 59999999999997644            4799999999


Q ss_pred             c-cHHHHHhh
Q psy13291         79 T-SLDKFYTK   87 (89)
Q Consensus        79 ~-sL~~~l~~   87 (89)
                      | +|.++++.
T Consensus        99 gg~L~~~l~~  108 (299)
T 4g31_A           99 KENLKDWMNG  108 (299)
T ss_dssp             SCCHHHHHHT
T ss_pred             CCcHHHHHHh
Confidence            9 99999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.66  E-value=7.7e-16  Score=99.96  Aligned_cols=76  Identities=12%  Similarity=0.159  Sum_probs=63.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|+++...  +....+.+.+|+.+|.. ++||||+++++++..++.+||+||||+|+|.+++.+
T Consensus        28 ~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~  105 (275)
T 3hyh_A           28 KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ  105 (275)
T ss_dssp             CEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEECCCEEHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHH-CCCCCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHH
Confidence            58899999999999999997542  22335678999999988 499999999999999999999999997777776654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.65  E-value=9.2e-16  Score=100.23  Aligned_cols=76  Identities=13%  Similarity=0.185  Sum_probs=65.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.++.+|..||+|.+... ......+.+.+|+.+|.. ++|||||+++++|..    ++.+||+||||+| +|.++
T Consensus        41 ~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~  119 (290)
T 3fpq_A           41 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTY  119 (290)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHH
T ss_pred             EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHH
Confidence            5889999999999999999754 345567789999999888 599999999999976    3469999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +++
T Consensus       120 l~~  122 (290)
T 3fpq_A          120 LKR  122 (290)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.65  E-value=6.1e-16  Score=101.31  Aligned_cols=75  Identities=19%  Similarity=0.218  Sum_probs=62.7

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|...     .+|..||||.+... +....+.+.+|+.+|.+ ++|||||+++|++..++.+|||||||++ ||.++
T Consensus        28 ~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~-l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~  105 (299)
T 4asz_A           28 KVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTN-LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF  105 (299)
T ss_dssp             CEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             EEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHh-CCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHH
Confidence            46777654     35788999999743 45567789999999988 5999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      |+.
T Consensus       106 l~~  108 (299)
T 4asz_A          106 LRA  108 (299)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            975

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.64  E-value=7.6e-16  Score=101.99  Aligned_cols=75  Identities=15%  Similarity=0.189  Sum_probs=62.5

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|..+     .++..||||++... +....+.+.+|+.+|.+ ++|||||+++|++..++.+|||||||++ ||.++
T Consensus        56 ~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~-l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~  133 (329)
T 4aoj_A           56 KVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTM-LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF  133 (329)
T ss_dssp             EEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             EEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHH
Confidence            46677644     36788999999743 45557789999999988 5999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       134 l~~  136 (329)
T 4aoj_A          134 LRS  136 (329)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            865

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.62  E-value=1.5e-15  Score=101.05  Aligned_cols=70  Identities=19%  Similarity=0.173  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||||+++....      ..+|+.+|.. ++|||||++++++..++.+||+||||+| +|.++|++
T Consensus        73 ~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~-l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~  143 (336)
T 4g3f_A           73 EVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAG-LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ  143 (336)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTT-CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHH
Confidence            588999999999999999975422      1358999877 5999999999999999999999999999 99999875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.61  E-value=9.6e-16  Score=100.74  Aligned_cols=76  Identities=9%  Similarity=0.046  Sum_probs=60.9

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+.|...     .+++.||||.+....+....+.+.+|+.+|.+ ++|||||+++|++..++.++||||||++ ||.++
T Consensus        41 ~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~-l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~  119 (308)
T 4gt4_A           41 KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR-LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEF  119 (308)
T ss_dssp             EEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHH
T ss_pred             EEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHh-CCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHH
Confidence            35666542     36678999999765444456789999999988 5999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      |..
T Consensus       120 L~~  122 (308)
T 4gt4_A          120 LVM  122 (308)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            854

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.55  E-value=2.1e-14  Score=97.19  Aligned_cols=76  Identities=14%  Similarity=0.178  Sum_probs=63.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|++|.++.+|+.||||++.... .....+.+.+|+.+|.. ++|||||++++++...      +.+|||||||+|+|.+
T Consensus        69 ~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~  147 (398)
T 4b99_A           69 VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKH-FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQ  147 (398)
T ss_dssp             EEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHH-CCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHh-cCCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHH
Confidence            58899999999999999997543 33456778999999988 5999999999988653      5799999999888877


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++.+
T Consensus       148 ~i~~  151 (398)
T 4b99_A          148 IIHS  151 (398)
T ss_dssp             HHTS
T ss_pred             HHHh
Confidence            7754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.54  E-value=6.2e-14  Score=98.45  Aligned_cols=74  Identities=8%  Similarity=-0.003  Sum_probs=65.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.++.+|+.||+|.+... .....+.+.+|+.+|.. ++||||++++++|..++.+||+||||+| +|.++|.
T Consensus       172 ~V~~~~~~~tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~  246 (573)
T 3uto_A          172 VVHRVTERATGNNFAAKFVMTP-HESDKETVRKEIQTMSV-LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA  246 (573)
T ss_dssp             EEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHHH-TCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHT
T ss_pred             EEEEEEECCCCCEEEEEEEecc-chhhHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHH
Confidence            4788999999999999999754 33446778999999988 5999999999999999999999999999 9988874

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.54  E-value=2.6e-14  Score=95.49  Aligned_cols=77  Identities=16%  Similarity=0.146  Sum_probs=63.3

Q ss_pred             cceeEEEccC-----CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLD-----PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~-----~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~   83 (89)
                      +|++|....+     ++.||+|.+.........+.+.+|+.+|.++.+|||||+++|++..+ +.+|||||||++ +|.+
T Consensus        79 ~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~  158 (353)
T 4ase_A           79 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST  158 (353)
T ss_dssp             EEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHH
T ss_pred             EEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHH
Confidence            4666765543     35799999987666666788999999999876779999999999765 579999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +|+.
T Consensus       159 ~L~~  162 (353)
T 4ase_A          159 YLRS  162 (353)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.52  E-value=1.9e-15  Score=99.36  Aligned_cols=76  Identities=14%  Similarity=0.076  Sum_probs=56.3

Q ss_pred             cceeEEEc---cCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLAR---LDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~---~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+.   .+++.||+|+++... .......+.+|+.+|.. ++||||++++++|..++.+||+||||+| +|.+++
T Consensus        39 ~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l  117 (304)
T 3ubd_A           39 KVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL  117 (304)
T ss_dssp             EEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCC-CCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHH
T ss_pred             EEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHH-CCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHH
Confidence            46777764   478899999997431 11123357789999877 5999999999999999999999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ++
T Consensus       118 ~~  119 (304)
T 3ubd_A          118 SK  119 (304)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.45  E-value=1.1e-12  Score=86.17  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=66.6

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|++... .+....+.+.+|+.+|.. ++||||+++++++..++.+|++||||++ +|.+++..
T Consensus        30 ~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~  107 (328)
T 3fe3_A           30 KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI-LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA  107 (328)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHH
Confidence            5788999999999999999764 344567788999999888 5999999999999999999999999999 99988754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.44  E-value=2.7e-13  Score=89.14  Aligned_cols=71  Identities=11%  Similarity=0.088  Sum_probs=56.5

Q ss_pred             ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |++|..   ...+|||+++.. .+....+.+.+|+.+|.+ ++|||||+++|++. ++.+|||||||+| ||.++|..
T Consensus        52 Vy~~~~---~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~-l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~  124 (307)
T 3omv_A           52 VYKGKW---HGDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHV  124 (307)
T ss_dssp             EEEEES---SSEEEEEECCCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHT
T ss_pred             EEEEEE---CCcEEEEEEEecCCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhh
Confidence            455543   235899999753 345567889999999887 59999999999764 5678999999999 99999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.44  E-value=8e-13  Score=94.58  Aligned_cols=76  Identities=9%  Similarity=-0.037  Sum_probs=59.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec-----CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-----VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-----~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      +|++|.++.+|+.||+|++...     ...........++.++.. .+|||||+++++|.+++.+|||||||+| +|.++
T Consensus       204 ~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~-~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~  282 (689)
T 3v5w_A          204 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYH  282 (689)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS-SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh-CCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHH
Confidence            5899999999999999999752     111112222233455444 5999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      |++
T Consensus       283 l~~  285 (689)
T 3v5w_A          283 LSQ  285 (689)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.43  E-value=1.3e-12  Score=84.47  Aligned_cols=76  Identities=11%  Similarity=0.188  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC----------------------
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG----------------------   68 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~----------------------   68 (89)
                      .|++|.+..+|+.||+|++.........+.+.+|+.+|.. ++||||+++++++...+                      
T Consensus        21 ~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (332)
T 3qd2_B           21 VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK-LEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPL   99 (332)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTS-CCCTTBCCEEEEEEECCSCHHHHHHHC------------
T ss_pred             EEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHh-CCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccc
Confidence            4788899999999999999865555557789999999887 49999999999986643                      


Q ss_pred             -----------------------------------EEEEEecchhc-cHHHHHhh
Q psy13291         69 -----------------------------------DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        69 -----------------------------------~~~iv~E~~~~-sL~~~l~~   87 (89)
                                                         .++++||||++ +|.++++.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  154 (332)
T 3qd2_B          100 SSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR  154 (332)
T ss_dssp             --------------------------------CCCEEEEEEECCCSSCHHHHHHT
T ss_pred             cCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc
Confidence                                               38999999999 99998865

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.43  E-value=2.5e-12  Score=85.59  Aligned_cols=76  Identities=12%  Similarity=0.189  Sum_probs=66.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|.+.... .....+.+.+|+.++.. ++||||+++++++..++.+|++||||++ +|.+++..
T Consensus        42 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  119 (389)
T 3gni_B           42 TVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKL-FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT  119 (389)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHh-CCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhh
Confidence            58889999999999999998643 34456778889999888 5999999999999999999999999999 99999865

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.43  E-value=1.3e-12  Score=84.38  Aligned_cols=76  Identities=9%  Similarity=-0.090  Sum_probs=66.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|.+....  +....+.+.+|+.++.. ++||||+++++++..++..|++|||++| +|.++++.
T Consensus        46 ~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~  124 (286)
T 3uqc_A           46 QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSR-IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT  124 (286)
T ss_dssp             EEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT
T ss_pred             EEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhc-CCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc
Confidence            57888888899999999997543  24456788999999877 5999999999999999999999999999 99999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.42  E-value=2.1e-12  Score=83.47  Aligned_cols=76  Identities=9%  Similarity=0.119  Sum_probs=65.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++..... ...+.+.+|+.+|.++.+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        28 ~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  104 (316)
T 2ac3_A           28 RVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK  104 (316)
T ss_dssp             EEEEEECSSSCCEEEEEEEECCSS-CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEEeeCcc-hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhc
Confidence            577888888999999999975432 23567889999998866899999999999999999999999998 99988864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.41  E-value=9.3e-13  Score=86.07  Aligned_cols=71  Identities=8%  Similarity=0.116  Sum_probs=52.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHH--HHHHHHhcCCCCceeeEEeEEEECC----EEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLT--DLDICMRSSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~--E~~il~~~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~   83 (89)
                      .|+.|.  .+|+.||||+++...    .+.+..  |+..+.. ++||||++++|++..++    .+|||||||++ ||.+
T Consensus        18 ~Vy~~~--~~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~-l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~   90 (303)
T 3hmm_A           18 EVWRGK--WRGEEVAVKIFSSRE----ERSWFREAEIYQTVM-LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD   90 (303)
T ss_dssp             EEEEEE--ETTEEEEEEEECGGG----HHHHHHHHHHHTSTT-CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHH
T ss_pred             EEEEEE--ECCEEEEEEEECccc----hhhHHHHHHHHHHhc-CCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHH
Confidence            356664  478999999996431    223333  4444334 59999999999998753    68999999999 9999


Q ss_pred             HHhhc
Q psy13291         84 FYTKV   88 (89)
Q Consensus        84 ~l~~~   88 (89)
                      +|+..
T Consensus        91 ~l~~~   95 (303)
T 3hmm_A           91 YLNRY   95 (303)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            98753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.40  E-value=5.4e-12  Score=80.03  Aligned_cols=77  Identities=16%  Similarity=0.114  Sum_probs=66.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+|+|.+.... .......+.+|+..+..+.+||||+++++++..++..+++|||+++ +|.+++..
T Consensus        26 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  104 (289)
T 1x8b_A           26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE  104 (289)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHh
Confidence            57888888899999999998642 3345677889999988866999999999999999999999999999 99999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.40  E-value=1.1e-12  Score=87.69  Aligned_cols=74  Identities=12%  Similarity=0.044  Sum_probs=61.7

Q ss_pred             cceeEEEc---cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLAR---LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~---~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.++   .+++.||+|.+.....   ..++.+|+.+|..+.+||||++++++|..++.+||+||||+| +|.++++
T Consensus        36 ~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           36 SVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN  112 (361)
T ss_dssp             EEEEEEEEBTTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT
T ss_pred             EEEEEEEcccCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc
Confidence            46777765   4678899999865432   345778999998866899999999999999999999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       113 ~  113 (361)
T 4f9c_A          113 S  113 (361)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.40  E-value=3.2e-12  Score=84.18  Aligned_cols=76  Identities=24%  Similarity=0.353  Sum_probs=68.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+.........+.+.+|+.+|.. ++||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        48 ~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  124 (360)
T 3eqc_A           48 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK  124 (360)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGG-CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHH-CCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHH
Confidence            4788888899999999999876666667889999999887 4999999999999999999999999999 99999865

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.40  E-value=5.5e-12  Score=81.47  Aligned_cols=75  Identities=8%  Similarity=0.162  Sum_probs=66.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+.. .+....+.+.+|+.++.. ++||||+++++++..++..+++|||+++ +|.++++.
T Consensus        25 ~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  100 (310)
T 3s95_A           25 QAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRC-LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS  100 (310)
T ss_dssp             EEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHh-CCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHh
Confidence            478888999999999999853 345567889999999887 4999999999999999999999999999 99999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.39  E-value=3.4e-12  Score=84.42  Aligned_cols=77  Identities=10%  Similarity=0.048  Sum_probs=66.9

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|++...  ......+.+..|..++....+||||+++++++..++.+|++|||++| +|.+++.+
T Consensus        24 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~  103 (345)
T 3a8x_A           24 KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR  103 (345)
T ss_dssp             EEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence            5788999999999999999854  34455677889999998866999999999999999999999999999 99988864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.39  E-value=3.7e-12  Score=82.32  Aligned_cols=75  Identities=9%  Similarity=0.213  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+...... ..+.+.+|+.++.. .+||||+++++++..++.+|++|||++| +|.+++..
T Consensus        35 ~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  110 (297)
T 3fxz_A           35 TVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  110 (297)
T ss_dssp             EEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeeccccc-HHHHHHHHHHHHhc-CCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh
Confidence            4788888899999999999754322 24567889999887 5999999999999999999999999999 99998865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.37  E-value=1.5e-12  Score=85.48  Aligned_cols=78  Identities=14%  Similarity=0.168  Sum_probs=65.1

Q ss_pred             cceeEE-----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHH
Q psy13291         11 KPELGL-----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~-----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.     ...+++.||+|.+.........+.+.+|+.++..+.+||||+++++++...+ .++++||||++ +|.+
T Consensus        37 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~  116 (359)
T 3vhe_A           37 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST  116 (359)
T ss_dssp             EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHH
T ss_pred             eEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHH
Confidence            366666     4567789999999866666667889999999998768999999999998765 59999999999 9999


Q ss_pred             HHhhc
Q psy13291         84 FYTKV   88 (89)
Q Consensus        84 ~l~~~   88 (89)
                      ++...
T Consensus       117 ~l~~~  121 (359)
T 3vhe_A          117 YLRSK  121 (359)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            98753

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.37  E-value=7.5e-12  Score=83.14  Aligned_cols=76  Identities=9%  Similarity=0.095  Sum_probs=65.7

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|.+... ......+.+.+|+.++..+ +||||+++++++..++..|++||||+| +|.+.+..
T Consensus        44 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~  121 (362)
T 2bdw_A           44 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA  121 (362)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT
T ss_pred             EEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH
Confidence            5788889999999999999754 3445567889999999884 999999999999999999999999999 99877653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.37  E-value=4.4e-12  Score=83.74  Aligned_cols=75  Identities=15%  Similarity=0.116  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|+.+|+|++....    .....+.+.+|+.++.. ++||||+++++++...+.+|++||||+| +|.+.+
T Consensus        39 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l  117 (351)
T 3c0i_A           39 VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM-LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI  117 (351)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHH
Confidence            57889999999999999997421    11125678899999888 4999999999999999999999999999 997766


Q ss_pred             h
Q psy13291         86 T   86 (89)
Q Consensus        86 ~   86 (89)
                      .
T Consensus       118 ~  118 (351)
T 3c0i_A          118 V  118 (351)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.36  E-value=8.3e-12  Score=80.46  Aligned_cols=76  Identities=11%  Similarity=0.064  Sum_probs=65.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|..+|+|.+...  ......+.+.+|+.++.. ++||||+++++++..++.+|++|||++| +|.+++..
T Consensus        26 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~  104 (294)
T 4eqm_A           26 TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ-LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES  104 (294)
T ss_dssp             EEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTT-CCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhc-CCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHh
Confidence            4788888899999999999653  334556788999999877 5999999999999999999999999999 99998864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.36  E-value=2.8e-12  Score=85.13  Aligned_cols=77  Identities=14%  Similarity=0.099  Sum_probs=65.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.+..+|+.+|+|++....  .....+.+..|..+|....+||||+++++++...+.+|++||||+| +|.+++++
T Consensus        38 ~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~  117 (353)
T 3txo_A           38 KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK  117 (353)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence            58889999999999999997531  2223566788999988866899999999999999999999999999 99988864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.35  E-value=4.9e-12  Score=84.28  Aligned_cols=76  Identities=9%  Similarity=-0.006  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..+|..+|+|.+......     ...+.+.+|+.+|.. +.||||+++++++...+.+|++|||++| +|.++
T Consensus        27 ~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~  105 (361)
T 2yab_A           27 IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ-VLHPNIITLHDVYENRTDVVLILELVSGGELFDF  105 (361)
T ss_dssp             EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHh-CCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHH
Confidence            5788899999999999999864221     135678899999887 4899999999999999999999999998 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       106 l~~  108 (361)
T 2yab_A          106 LAQ  108 (361)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.35  E-value=2.1e-12  Score=84.08  Aligned_cols=76  Identities=13%  Similarity=0.211  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|.+.........+.+.+|+.+|.. +.||||+++++++..++.+|++|||++++|.+++..
T Consensus        20 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~   95 (317)
T 2pmi_A           20 TVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE-LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDS   95 (317)
T ss_dssp             EEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTT-CCBTTBCCEEEEECCTTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHh-cCCCCcceEEEEEEECCeEEEEEEecCCCHHHHHHh
Confidence            5788888899999999999765433334667889999887 599999999999999999999999999988777653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.35  E-value=1.2e-12  Score=87.24  Aligned_cols=76  Identities=16%  Similarity=0.167  Sum_probs=65.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..||+|.+.........+.+.+|+.+|.. ++||||+++++++..++.+|++||||++ +|.++++.
T Consensus       129 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  205 (377)
T 3cbl_A          129 EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ-YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT  205 (377)
T ss_dssp             EEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             eEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHh
Confidence            4677888889999999999765555556778899999887 5999999999999998999999999999 99998864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.35  E-value=7.9e-12  Score=81.75  Aligned_cols=76  Identities=9%  Similarity=0.019  Sum_probs=64.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..+|..+|+|.+......     ...+.+.+|+.+|..+ +||||+++++++...+.++++|||+++ +|.++
T Consensus        26 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  104 (326)
T 2y0a_A           26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDF  104 (326)
T ss_dssp             EEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHH
Confidence            5788889999999999999764221     1356788999999884 999999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       105 l~~  107 (326)
T 2y0a_A          105 LAE  107 (326)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.35  E-value=9.4e-12  Score=81.24  Aligned_cols=75  Identities=12%  Similarity=0.200  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.||+|.+...... ..+.+.+|+.++.. ++||||+++++++...+..|++|||+++ +|.+++..
T Consensus        60 ~V~~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  135 (321)
T 2c30_A           60 IVCLAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRD-YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ  135 (321)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTTCC-SHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT
T ss_pred             EEEEEEECCCCcEEEEEEEeccchh-HHHHHHHHHHHHHh-CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh
Confidence            4678888889999999999754322 35668899999877 5999999999999999999999999999 99998864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.34  E-value=1.2e-11  Score=79.55  Aligned_cols=76  Identities=14%  Similarity=0.265  Sum_probs=66.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+.........+.+.+|+.++.. .+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        37 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  113 (303)
T 3a7i_A           37 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP  113 (303)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT
T ss_pred             EEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc
Confidence            4778888889999999999865444456788999999888 4999999999999999999999999999 99998864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.34  E-value=1.2e-11  Score=80.98  Aligned_cols=73  Identities=8%  Similarity=0.004  Sum_probs=63.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++...    ....+.+|+.++..+.+||||+++++++..++..|++||||+| +|.+++..
T Consensus        26 ~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   99 (325)
T 3kn6_A           26 ICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK   99 (325)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh
Confidence            4788899999999999999743    2445678999988865699999999999999999999999999 99998865

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.34  E-value=9.4e-12  Score=81.37  Aligned_cols=74  Identities=3%  Similarity=-0.019  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|.+...  ......+.+|+.+|.. ++||||+++++++...+.++++||||+| +|.+++..
T Consensus        20 ~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~   94 (321)
T 1tki_A           20 IVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNI-ARHRNILHLHESFESMEELVMIFEFISGLDIFERINT   94 (321)
T ss_dssp             EEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHH-SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS
T ss_pred             EEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHh-CCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHh
Confidence            4788888999999999999743  2345678899999887 5999999999999999999999999999 99988854

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.34  E-value=3.9e-12  Score=85.89  Aligned_cols=77  Identities=10%  Similarity=0.066  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|....+++.+|+|++....  .....+.+..|..+|....+||||+++++++..++.+|++||||+| +|..++++
T Consensus        67 ~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~  146 (396)
T 4dc2_A           67 KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR  146 (396)
T ss_dssp             EEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHH
Confidence            58889999999999999998532  2233456788999988766999999999999999999999999999 99888764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.34  E-value=5.4e-12  Score=81.90  Aligned_cols=76  Identities=9%  Similarity=-0.010  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.||+|++.........+.+.+|+.+|..+ +||||+++++++...+  .++++|||+++ +|.++++.
T Consensus        24 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  102 (319)
T 4euu_A           24 NVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE  102 (319)
T ss_dssp             EEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHS
T ss_pred             EEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHH
Confidence            47888899999999999997543333356678999999884 8999999999998765  88999999999 99999865

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.33  E-value=3e-12  Score=83.73  Aligned_cols=76  Identities=12%  Similarity=0.127  Sum_probs=61.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+.........+.+.+|+.++.. ++||||+++++++..++..|++||||++ +|.+++..
T Consensus        22 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   98 (323)
T 3tki_A           22 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP   98 (323)
T ss_dssp             EEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBT
T ss_pred             EEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhh
Confidence            4788888999999999999754433345678899999887 5999999999999999999999999999 98877653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.33  E-value=4.8e-12  Score=82.73  Aligned_cols=76  Identities=18%  Similarity=0.222  Sum_probs=64.4

Q ss_pred             cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+|.   .+|+|.+.........+.+.+|+.+|.. ++||||+++++++...+.+|++|||+++ +|.++++
T Consensus        64 ~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  142 (325)
T 3kul_A           64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ-FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR  142 (325)
T ss_dssp             EEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHH
Confidence            467777776555   4999999866566667889999999887 4999999999999988999999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       143 ~  143 (325)
T 3kul_A          143 T  143 (325)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.32  E-value=1.3e-11  Score=82.40  Aligned_cols=74  Identities=15%  Similarity=0.109  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+|..+|+|++.... ....+.+.+|+.+|.. ++||||+++++++...+.++++|||+++ +|.+++.
T Consensus       104 ~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~  178 (373)
T 2x4f_A          104 QVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQ-LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII  178 (373)
T ss_dssp             CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            57888888999999999997542 3446778999999887 5999999999999999999999999999 8877764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.32  E-value=9.8e-12  Score=79.65  Aligned_cols=75  Identities=11%  Similarity=0.087  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+|..+|+|.+.........+.+.+|+.+|.. ++||||+++++++...+..+++|||+++ +|.+++.
T Consensus        37 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  112 (285)
T 3is5_A           37 DVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS-LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIV  112 (285)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHH
T ss_pred             EEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHh-CCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHH
Confidence            5788888899999999999865433346778899999887 5999999999999999999999999999 9988774

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.32  E-value=4.5e-12  Score=84.35  Aligned_cols=77  Identities=9%  Similarity=0.191  Sum_probs=64.1

Q ss_pred             cceeEEEc-------cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLAR-------LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~-------~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|...       .++..+|+|.+.........+.+.+|+.+|..+.+||||+++++++...+.+|++|||+++ +|.
T Consensus        96 ~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~  175 (370)
T 2psq_A           96 QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR  175 (370)
T ss_dssp             EEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             eEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHH
Confidence            46666653       3455799999976655566788999999998855899999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      ++++.
T Consensus       176 ~~l~~  180 (370)
T 2psq_A          176 EYLRA  180 (370)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.32  E-value=5.6e-12  Score=83.76  Aligned_cols=76  Identities=16%  Similarity=0.154  Sum_probs=62.9

Q ss_pred             cceeEE-----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGL-----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~-----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.     ...++..||+|.+...........+.+|+.++..+ +||||+++++++...+..|++||||++ +|.++
T Consensus        86 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~  164 (367)
T 3l9p_A           86 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF  164 (367)
T ss_dssp             CEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHH
T ss_pred             EEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHH
Confidence            466776     44577889999997655566667889999999884 999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       165 l~~  167 (367)
T 3l9p_A          165 LRE  167 (367)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.32  E-value=1.3e-11  Score=81.90  Aligned_cols=74  Identities=12%  Similarity=0.018  Sum_probs=63.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|+.||+|.+......  .+.+.+|+.++.. ++||||+++++++..++.+|++||||++ +|.+++..
T Consensus        35 ~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  109 (361)
T 3uc3_A           35 VARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRS-LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN  109 (361)
T ss_dssp             SEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHh-CCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHh
Confidence            5789999999999999999754322  3457789999887 5999999999999999999999999999 99988754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.32  E-value=7.2e-12  Score=81.80  Aligned_cols=75  Identities=11%  Similarity=0.124  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec----CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT----VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~----~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|....++..+|+|.+...    ......+.+.+|+.++..+ +||||+++++++...+.++++||||+| +|.+++
T Consensus        41 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l  119 (345)
T 3hko_A           41 VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKL  119 (345)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHE
T ss_pred             EEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeCCCCCcHHHHH
Confidence            4788888999999999999753    1234567899999999885 999999999999999999999999999 999988


Q ss_pred             h
Q psy13291         86 T   86 (89)
Q Consensus        86 ~   86 (89)
                      .
T Consensus       120 ~  120 (345)
T 3hko_A          120 N  120 (345)
T ss_dssp             E
T ss_pred             H
Confidence            5

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.32  E-value=3.6e-12  Score=84.44  Aligned_cols=77  Identities=8%  Similarity=0.022  Sum_probs=64.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.+..+|+.+|+|.+....  .....+.+..|..+|....+||||+++++++...+.+|++|||++| +|.++++.
T Consensus        32 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~  111 (345)
T 1xjd_A           32 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS  111 (345)
T ss_dssp             EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence            58899999999999999997531  1123456778999988766999999999999999999999999999 99998865

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.32  E-value=5.4e-12  Score=88.54  Aligned_cols=73  Identities=7%  Similarity=0.047  Sum_probs=61.1

Q ss_pred             EEccCCCEEEEEEEeecC-----CH----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         16 LARLDPDSEWSFRITFTV-----NT----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        16 ~~~~~~~~~AvK~i~~~~-----~~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .....|+.+|+|.+....     +.    ...+.+.+|+.+|.++.+||||+++++++.+++.+||||||++| +|.++|
T Consensus       254 rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i  333 (569)
T 4azs_A          254 RRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDML  333 (569)
T ss_dssp             EEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHH
T ss_pred             ccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHH
Confidence            334578999999997532     11    23467999999999977999999999999999999999999999 999999


Q ss_pred             hhc
Q psy13291         86 TKV   88 (89)
Q Consensus        86 ~~~   88 (89)
                      +..
T Consensus       334 ~~~  336 (569)
T 4azs_A          334 AAG  336 (569)
T ss_dssp             HTT
T ss_pred             HhC
Confidence            764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.31  E-value=5.6e-12  Score=82.15  Aligned_cols=76  Identities=11%  Similarity=0.036  Sum_probs=64.5

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++...     .++..+|+|.+.........+.+.+|+.++..+ +||||+++++++..++.+|++|||+++ +|.++
T Consensus        62 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  140 (343)
T 1luf_A           62 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF  140 (343)
T ss_dssp             EEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             eEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEecCCCCcHHHH
Confidence            46667665     345889999998665566677899999998884 999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       141 l~~  143 (343)
T 1luf_A          141 LRS  143 (343)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.31  E-value=5.3e-12  Score=83.38  Aligned_cols=76  Identities=12%  Similarity=-0.014  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|....+|+.+|+|++....  .....+.+..|..+|.. .+||||+++++++...+.+|++|||++| +|.+++.+
T Consensus        20 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~   98 (337)
T 1o6l_A           20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR   98 (337)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHh-CCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence            57889999999999999997531  11235678889999887 5999999999999999999999999999 99888764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.31  E-value=2.2e-11  Score=79.19  Aligned_cols=76  Identities=53%  Similarity=0.841  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|+++....+|+.+|+|.+...........+..|+..+.+..+||||+++++++..++..+++|||++++|.+++.
T Consensus        37 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~  112 (327)
T 3aln_A           37 SVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYK  112 (327)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHH
T ss_pred             EEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCCChHHHHH
Confidence            4778888889999999999876555556677778875556579999999999999999999999999997777765

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.31  E-value=5.1e-12  Score=82.76  Aligned_cols=76  Identities=8%  Similarity=0.071  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|++.....  ....+.+..|..++.. .+||||+++++++...+.+|++|||++| +|.++++.
T Consensus        21 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~   99 (318)
T 1fot_A           21 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK   99 (318)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhh-CCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH
Confidence            588899999999999999975311  1234567789999877 5999999999999999999999999999 99999865

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.31  E-value=2.8e-11  Score=77.56  Aligned_cols=74  Identities=9%  Similarity=0.032  Sum_probs=61.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|+.+|+|.+.... .....+.+.+|+.++.. ++||||+++++++..++.++++|||+++ .++.+.
T Consensus        17 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~   92 (292)
T 3o0g_A           17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD   92 (292)
T ss_dssp             EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH
T ss_pred             EEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhc-CCCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHH
Confidence            57889999999999999997643 33345778899999887 5999999999999999999999999999 444443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.31  E-value=2.4e-11  Score=77.78  Aligned_cols=77  Identities=13%  Similarity=0.110  Sum_probs=65.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC----CH----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV----NT----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~----~~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL   81 (89)
                      .|++|.+..+|+.+|+|.+....    ..    ...+.+.+|+.++..+.+||||+++++++...+..+++|||+++ +|
T Consensus        32 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  111 (298)
T 1phk_A           32 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL  111 (298)
T ss_dssp             EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcH
Confidence            57888888999999999997542    11    23466889999998865799999999999999999999999999 99


Q ss_pred             HHHHhh
Q psy13291         82 DKFYTK   87 (89)
Q Consensus        82 ~~~l~~   87 (89)
                      .+++..
T Consensus       112 ~~~l~~  117 (298)
T 1phk_A          112 FDYLTE  117 (298)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.31  E-value=3.8e-11  Score=77.40  Aligned_cols=76  Identities=11%  Similarity=-0.003  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|.+..... ....+.+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.++++.
T Consensus        18 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   95 (311)
T 4agu_A           18 VVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ-LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY   95 (311)
T ss_dssp             EEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHT
T ss_pred             EEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHh-CCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhh
Confidence            578888999999999999975443 3345678899999988 4999999999999999999999999999 99888754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.31  E-value=1.6e-11  Score=83.79  Aligned_cols=76  Identities=13%  Similarity=0.177  Sum_probs=65.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|.+.... .....+.+.+|+.+|.. ++||||+++++++..++.+|++||||+| +|.+.+..
T Consensus        26 ~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~  103 (444)
T 3soa_A           26 VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL-LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA  103 (444)
T ss_dssp             EEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHH-CCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHH
Confidence            47888899999999999998643 33456778999999988 4999999999999999999999999999 99877754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.31  E-value=1e-11  Score=80.78  Aligned_cols=76  Identities=17%  Similarity=0.161  Sum_probs=62.2

Q ss_pred             cceeEE-----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGL-----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~-----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++.     ...++..+|+|.+...........+.+|+.++..+ .||||+++++++...+..|++|||+++ +|.++
T Consensus        45 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  123 (327)
T 2yfx_A           45 EVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF  123 (327)
T ss_dssp             CEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHH
T ss_pred             eEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHH
Confidence            456666     45678899999997655556677889999999885 999999999999999999999999998 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       124 l~~  126 (327)
T 2yfx_A          124 LRE  126 (327)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.31  E-value=6.5e-12  Score=80.89  Aligned_cols=76  Identities=20%  Similarity=0.291  Sum_probs=64.0

Q ss_pred             cceeEEE-----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLA-----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~-----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+     ..++..+|+|.+.........+.+.+|+.+|.. ++||||+++++++...+.++++|||+++ +|.++
T Consensus        38 ~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  116 (314)
T 2ivs_A           38 KVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ-VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF  116 (314)
T ss_dssp             EEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             eEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhh-CCCCceeeEEEEEecCCceEEEEeecCCCCHHHH
Confidence            3566665     345588999999866666667889999999887 4999999999999999999999999998 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       117 l~~  119 (314)
T 2ivs_A          117 LRE  119 (314)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.31  E-value=3e-11  Score=77.15  Aligned_cols=75  Identities=16%  Similarity=0.096  Sum_probs=63.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..++..+|+|.+.... ....+.+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus        37 ~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (295)
T 2clq_A           37 IVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKH-LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS  112 (295)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHh-CCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHh
Confidence            57888888899999999997543 3346678899999887 5999999999999999999999999999 99999865

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.30  E-value=1.4e-11  Score=80.15  Aligned_cols=77  Identities=14%  Similarity=0.197  Sum_probs=62.3

Q ss_pred             cceeEEEccCCCEE--EEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSE--WSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~--AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+  |+|.+.........+.+.+|+.++..+.+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        40 ~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  119 (327)
T 1fvr_A           40 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK  119 (327)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHT
T ss_pred             eEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHh
Confidence            57888888888765  9999975444445677889999988855999999999999999999999999999 99999865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.30  E-value=2.2e-11  Score=80.52  Aligned_cols=75  Identities=12%  Similarity=0.257  Sum_probs=62.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|.+..+|+.||+|.+....  .....+.+.+|+.+|.. ++||||+++++++..++..|++|||++|++.+++.
T Consensus        69 ~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~  145 (348)
T 1u5q_A           69 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE  145 (348)
T ss_dssp             EEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH
T ss_pred             EEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCeEEEEEecCCCCHHHHHH
Confidence            47788888999999999997542  23345778999999988 49999999999999999999999999996666653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.30  E-value=1.9e-11  Score=77.90  Aligned_cols=76  Identities=61%  Similarity=0.882  Sum_probs=59.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|.+..+|+.+|+|.+..............|...+.+..+||||+++++++..++..+++|||++++|.+++.
T Consensus        22 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~   97 (290)
T 3fme_A           22 VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYK   97 (290)
T ss_dssp             EEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSEEHHHHHH
T ss_pred             EEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhccchHHHHH
Confidence            4788888899999999999765555445555556655455579999999999999999999999999997776664

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.30  E-value=7.9e-12  Score=84.05  Aligned_cols=76  Identities=11%  Similarity=0.095  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|..+|+|.+....  .....+.+.+|+.+|.. ++||||+++++++...+.+|++|||++| +|.++++.
T Consensus        30 ~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~  108 (384)
T 4fr4_A           30 KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG-LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ  108 (384)
T ss_dssp             CEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHT
T ss_pred             EEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHh
Confidence            68899999999999999997531  11235678899999887 5999999999999999999999999999 99998865

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.30  E-value=1.2e-11  Score=78.40  Aligned_cols=76  Identities=12%  Similarity=0.127  Sum_probs=65.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+.........+.+.+|+.++.. ++||||+++++++..++..|++|||+++ +|.+++..
T Consensus        22 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   98 (276)
T 2yex_A           22 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP   98 (276)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT
T ss_pred             EEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHh-cCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh
Confidence            5788888899999999999765444456778899999877 5999999999999999999999999999 99877653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.30  E-value=5e-12  Score=84.30  Aligned_cols=75  Identities=20%  Similarity=0.221  Sum_probs=62.3

Q ss_pred             ceeEEEc---cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLAR---LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~---~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+.+...   .++..+|+|.+.........+.+.+|+.+|.. ++||||+++++++...+.+|++|||+++ +|.++++.
T Consensus        61 Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~  139 (373)
T 2qol_A           61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ-FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK  139 (373)
T ss_dssp             EEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             EEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHh
Confidence            4555544   35678999999765556667789999999887 4999999999999999999999999999 99999865

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.30  E-value=8e-12  Score=80.43  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=64.0

Q ss_pred             ceeEEE-----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLA-----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~-----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+++..     ..++..+|+|.+.........+.+.+|+.++..+.+||||+++++++..++..+++|||+++ +|.+++
T Consensus        39 V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  118 (313)
T 1t46_A           39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL  118 (313)
T ss_dssp             EEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHH
T ss_pred             eEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHH
Confidence            555553     35678899999986655556788999999998855999999999999999999999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       119 ~~  120 (313)
T 1t46_A          119 RR  120 (313)
T ss_dssp             HH
T ss_pred             Hh
Confidence            75

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.30  E-value=3.1e-11  Score=80.38  Aligned_cols=77  Identities=16%  Similarity=0.185  Sum_probs=64.5

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|.+... ......+.+.+|+.+|..+.+||||+++++++..++  .+|++||||+++|.++++.
T Consensus        24 ~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~  103 (388)
T 3oz6_A           24 IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA  103 (388)
T ss_dssp             CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHc
Confidence            5788999999999999999653 344567788899999998656999999999998755  7999999999988888764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.30  E-value=2.3e-11  Score=79.02  Aligned_cols=76  Identities=9%  Similarity=0.006  Sum_probs=64.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..+|..+|+|.+......     ...+.+.+|+.++.. +.||||+++++++...+.++++|||+++ +|.++
T Consensus        27 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  105 (321)
T 2a2a_A           27 IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ-VLHHNVITLHDVYENRTDVVLILELVSGGELFDF  105 (321)
T ss_dssp             EEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             EEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHh-CCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHH
Confidence            4788888899999999999764221     135678899999988 4899999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       106 l~~  108 (321)
T 2a2a_A          106 LAQ  108 (321)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.29  E-value=3.2e-12  Score=86.58  Aligned_cols=76  Identities=13%  Similarity=0.104  Sum_probs=62.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|++....  .....+.+..|..++.. .+||||+++++++..++.+|++||||+| +|.++++.
T Consensus        84 ~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~  162 (410)
T 3v8s_A           84 EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN  162 (410)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc
Confidence            58899999999999999997421  01112346789999887 5999999999999999999999999999 99998865

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.29  E-value=3e-11  Score=81.18  Aligned_cols=75  Identities=7%  Similarity=-0.013  Sum_probs=64.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|.+.... ......+.+|+.+|.. ++||||+++++++...+.++++||||+| +|.+++..
T Consensus        66 ~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~  141 (387)
T 1kob_A           66 VVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQ-LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA  141 (387)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTT-CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC
T ss_pred             EEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHh-CCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHh
Confidence            47888888999999999997543 3345678899999887 5999999999999999999999999999 99988753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.29  E-value=1.6e-11  Score=79.91  Aligned_cols=77  Identities=19%  Similarity=0.131  Sum_probs=64.9

Q ss_pred             cceeEEEccCCC-----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPD-----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~-----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+.+.+..++.     .+|+|.+.........+.+.+|+.++..+.+||||+++++++..++.++++|||+++ +|.++
T Consensus        61 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~  140 (333)
T 2i1m_A           61 KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF  140 (333)
T ss_dssp             EEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHH
T ss_pred             ceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHH
Confidence            466777666554     799999986666666788999999998855899999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       141 l~~  143 (333)
T 2i1m_A          141 LRR  143 (333)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.29  E-value=2e-11  Score=84.00  Aligned_cols=76  Identities=8%  Similarity=0.074  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH------------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT------------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD   78 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~------------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~   78 (89)
                      .|++|.+..++..+|+|++......            ...+.+.+|+.+|.. ++||||+++++++...+.+|++||||+
T Consensus        51 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~  129 (504)
T 3q5i_A           51 EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS-LDHPNIIKLFDVFEDKKYFYLVTEFYE  129 (504)
T ss_dssp             EEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEcCCEEEEEEecCC
Confidence            4788889999999999999753211            235678899999988 499999999999999999999999999


Q ss_pred             c-cHHHHHhh
Q psy13291         79 T-SLDKFYTK   87 (89)
Q Consensus        79 ~-sL~~~l~~   87 (89)
                      | +|.+++..
T Consensus       130 gg~L~~~l~~  139 (504)
T 3q5i_A          130 GGELFEQIIN  139 (504)
T ss_dssp             TCBHHHHHHH
T ss_pred             CCcHHHHHHH
Confidence            9 99877643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.29  E-value=8.1e-12  Score=82.80  Aligned_cols=76  Identities=8%  Similarity=0.028  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++....  .....+.+.+|+.+|.. .+||||+++++++..++.+|++|||++| +|.+++++
T Consensus        56 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~  134 (350)
T 1rdq_E           56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR  134 (350)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHH
Confidence            58889999999999999997531  11235678889999887 5999999999999999999999999999 99998865

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.29  E-value=1.3e-11  Score=81.51  Aligned_cols=72  Identities=10%  Similarity=0.015  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++......     ...|++++.+..+||||+++++++..++.+|++||||+| +|.+.+..
T Consensus        37 ~V~~~~~~~~~~~~avK~~~~~~~~-----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~  109 (342)
T 2qr7_A           37 VCKRCIHKATNMEFAVKIIDKSKRD-----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR  109 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEETTTCC-----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT
T ss_pred             EEEEEEECCCCCEEEEEEEEcccCC-----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence            5788999999999999999754322     335788887766899999999999999999999999999 99887754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.29  E-value=1.5e-11  Score=80.31  Aligned_cols=77  Identities=9%  Similarity=0.191  Sum_probs=63.2

Q ss_pred             cceeEEEc-------cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLAR-------LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~-------~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|...       .++..+|+|.+.........+.+.+|+.++..+.+||||+++++++...+.+|++|||+++ +|.
T Consensus        50 ~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  129 (334)
T 2pvf_A           50 QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR  129 (334)
T ss_dssp             EEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHH
T ss_pred             eEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHH
Confidence            35666654       4667899999986656666788999999998855999999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       130 ~~l~~  134 (334)
T 2pvf_A          130 EYLRA  134 (334)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            99865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.28  E-value=1.2e-11  Score=82.85  Aligned_cols=76  Identities=9%  Similarity=-0.010  Sum_probs=63.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.||+|++.........+.+.+|+.+|.. ++||||+++++++...+  ..+++||||++ +|.++++.
T Consensus        24 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  102 (396)
T 4eut_A           24 NVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK-LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE  102 (396)
T ss_dssp             EEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHH-CCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTS
T ss_pred             EEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHh
Confidence            5788999999999999999754323335667889999988 49999999999998765  78999999999 99999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.28  E-value=7.8e-11  Score=74.80  Aligned_cols=76  Identities=14%  Similarity=0.229  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++....+|+.+|+|.+.... .....+.+.+|+.++..+ +||||+++++.+..  .+.+|++|||+++ +|.+++.
T Consensus        21 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   99 (279)
T 2w5a_A           21 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT   99 (279)
T ss_dssp             EEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHH
Confidence            47788888899999999998643 445567889999999885 99999999998865  5689999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       100 ~  100 (279)
T 2w5a_A          100 K  100 (279)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.28  E-value=1.4e-11  Score=80.46  Aligned_cols=76  Identities=8%  Similarity=0.147  Sum_probs=61.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+..... ....+.+.+|+.+|.. ++||||+++++++...+.++++|||++++|.+++..
T Consensus        49 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~  125 (329)
T 3gbz_A           49 EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE-LQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDK  125 (329)
T ss_dssp             EEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGG-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHH-cCCCCcceEEEEEecCCEEEEEEecCCCCHHHHHhh
Confidence            578888899999999999975432 2335667889999887 499999999999999999999999999988887764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.28  E-value=7.2e-11  Score=76.14  Aligned_cols=76  Identities=11%  Similarity=0.272  Sum_probs=65.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|..+|+|.+...  .+....+.+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus        47 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  125 (310)
T 2wqm_A           47 EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ-LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH  125 (310)
T ss_dssp             EEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHH
T ss_pred             eEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHH
Confidence            5778888889999999999752  344567788999999887 4999999999999999999999999999 99998864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.27  E-value=2.4e-11  Score=77.45  Aligned_cols=74  Identities=16%  Similarity=0.135  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..++..+|+|.+....  ...+.+.+|+.++..+ +||||+++++++..++.+|++|||+++ +|.++++.
T Consensus        28 ~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  102 (288)
T 3kfa_A           28 EVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  102 (288)
T ss_dssp             SEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH
T ss_pred             eEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHh
Confidence            57889999999999999997533  3467788999999884 999999999999999999999999998 99999865

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.27  E-value=1e-11  Score=85.61  Aligned_cols=76  Identities=13%  Similarity=0.152  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|++.....  ....+.+.+|+.+|.. ++||||+++++++...+.+|++||||+| +|.+++..
T Consensus        31 ~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~  109 (476)
T 2y94_A           31 KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL-FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK  109 (476)
T ss_dssp             CEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTS
T ss_pred             EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHh
Confidence            588999999999999999975311  1235678899999877 5999999999999999999999999999 99998864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.27  E-value=7.4e-11  Score=75.56  Aligned_cols=76  Identities=13%  Similarity=0.085  Sum_probs=65.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.+....++..+|+|.+...  ......+.+..|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus        30 ~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  108 (294)
T 2rku_A           30 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS-LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR  108 (294)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHh-CCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHh
Confidence            4788888889999999999754  234456778899999887 5999999999999999999999999999 99988764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.27  E-value=8e-11  Score=74.92  Aligned_cols=76  Identities=9%  Similarity=0.095  Sum_probs=65.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.|.+..+|..+|+|.+... ......+.+.+|+.++..+ +||||+++++++..++..+++|||+++ +|.+.+..
T Consensus        21 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   98 (284)
T 3kk8_A           21 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA   98 (284)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHh
Confidence            4778888899999999999764 3445567888999999884 999999999999999999999999999 98776643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.27  E-value=6.9e-11  Score=77.35  Aligned_cols=76  Identities=13%  Similarity=0.085  Sum_probs=65.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+++.+|+|.+...  ......+.+.+|+.++.. ++||||+++++++...+.+|++|||+++ +|.+++..
T Consensus        56 ~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  134 (335)
T 2owb_A           56 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS-LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR  134 (335)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhc
Confidence            4788888889999999999754  234456788899999887 5999999999999999999999999999 99988764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.27  E-value=9.8e-11  Score=76.37  Aligned_cols=75  Identities=8%  Similarity=0.003  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+|+.||+|.+.... .....+.+.+|+.++.. +.||||+++++++...+.+|++|||+++ +|.+++.
T Consensus        40 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  116 (331)
T 4aaa_A           40 MVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ-LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL  116 (331)
T ss_dssp             SEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhh-CCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHh
Confidence            57889999999999999997543 33445667899999988 4899999999999999999999999999 8888764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.27  E-value=3.1e-11  Score=77.45  Aligned_cols=75  Identities=17%  Similarity=0.282  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..+|+|.+.... ....+.+..|+.++.. ++||||+++++++..++.+|++|||+++ +|++++..
T Consensus        34 ~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  109 (302)
T 2j7t_A           34 KVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILAT-CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE  109 (302)
T ss_dssp             CEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHH-CCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhc-CCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHh
Confidence            57888888999999999997432 2236678899999888 4999999999999999999999999999 99988764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.27  E-value=4.8e-11  Score=75.90  Aligned_cols=76  Identities=9%  Similarity=0.023  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++....+|+.+|+|.+......     ...+.+.+|+.++..+ .||||+++++++...+..+++|||+++ +|.++
T Consensus        20 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   98 (283)
T 3bhy_A           20 IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDF   98 (283)
T ss_dssp             EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             EEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEeecCCCcHHHH
Confidence            4788888889999999999753211     1356788999999884 899999999999999999999999998 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus        99 l~~  101 (283)
T 3bhy_A           99 LAE  101 (283)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.26  E-value=1.5e-11  Score=78.88  Aligned_cols=76  Identities=16%  Similarity=0.168  Sum_probs=59.4

Q ss_pred             cceeEE----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHH
Q psy13291         11 KPELGL----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.    +..+|+.+|+|.+.........+.+.+|+.+|.. +.||||+++++++..+  +.++++|||+++ +|.+
T Consensus        36 ~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~  114 (302)
T 4e5w_A           36 KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN-LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE  114 (302)
T ss_dssp             EEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHT-CCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHH
T ss_pred             EEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHh-CCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHH
Confidence            466676    4668899999999755444446778899999887 4999999999999876  679999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       115 ~l~~  118 (302)
T 4e5w_A          115 YLPK  118 (302)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9853

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.26  E-value=5.5e-11  Score=76.58  Aligned_cols=75  Identities=11%  Similarity=-0.006  Sum_probs=61.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|+.+|+|.+..... ...+.+.+|+.++..+ +||||+++++++...+..|++|||+++ +|.+++..
T Consensus        24 ~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   99 (304)
T 2jam_A           24 EVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE   99 (304)
T ss_dssp             EEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             eEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHH
Confidence            578888889999999999985422 2345688899999884 999999999999999999999999999 99888753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.26  E-value=8.3e-12  Score=84.61  Aligned_cols=76  Identities=13%  Similarity=0.007  Sum_probs=63.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|....+|+.||+|++....  .....+.+..|..+|.. .+||||+++++++...+.+|++||||+| +|.+++.+
T Consensus        76 ~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~-~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~  154 (412)
T 2vd5_A           76 EVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK  154 (412)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHH-SCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHh
Confidence            57889999999999999997421  11123457789999887 5999999999999999999999999999 99999865

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.26  E-value=1e-11  Score=81.16  Aligned_cols=77  Identities=14%  Similarity=0.121  Sum_probs=60.0

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+.     .++..+|+|.+.........+.+.+|+.+|..+.+||||+++++++...+.+|++|||+++ +|.++
T Consensus        60 ~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~  139 (344)
T 1rjb_A           60 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY  139 (344)
T ss_dssp             EEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             eeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHH
Confidence            35566642     3566899999975444445678899999998855999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       140 l~~  142 (344)
T 1rjb_A          140 LRS  142 (344)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            865

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.26  E-value=1.4e-11  Score=84.90  Aligned_cols=74  Identities=16%  Similarity=0.130  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..||+|.+.....  ..+.+.+|+.+|.. ++||||+++++++...+.+||+||||++ +|.++++.
T Consensus       235 ~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  309 (495)
T 1opk_A          235 EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  309 (495)
T ss_dssp             SEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHh-cCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHh
Confidence            578888888899999999975432  25678899999988 4999999999999999999999999998 99999875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.26  E-value=2.4e-11  Score=83.39  Aligned_cols=75  Identities=15%  Similarity=0.120  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.+..++..+|+|++.... .......+.+|+.+|.. ++||||+++++++...+.+|++||||++ +|.+.+.
T Consensus        52 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~  128 (494)
T 3lij_A           52 EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL-LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII  128 (494)
T ss_dssp             EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHH
Confidence            47889999999999999997542 22235678899999877 5999999999999999999999999999 9877664

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.26  E-value=6.7e-11  Score=76.67  Aligned_cols=75  Identities=13%  Similarity=0.274  Sum_probs=63.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE------CCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR------EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~------~~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.+..+|+.+|+|.+......  .+.+.+|+.++..+.+||||+++++++..      .+.+|++|||+++ +|.+
T Consensus        39 ~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~  116 (326)
T 2x7f_A           39 QVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD  116 (326)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHH
T ss_pred             EEEEEEECCCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHH
Confidence            5788888889999999999754322  45678899998886689999999999987      4689999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       117 ~l~~  120 (326)
T 2x7f_A          117 LIKN  120 (326)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9865

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.25  E-value=4.4e-11  Score=77.44  Aligned_cols=76  Identities=11%  Similarity=0.056  Sum_probs=65.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|+.+|+|.+....  .....+.+.+|+.++.. ++||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        49 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  127 (309)
T 2h34_A           49 DVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR-LQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR  127 (309)
T ss_dssp             EEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH
T ss_pred             eEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhh-cCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh
Confidence            57888888899999999997532  33445778899999887 5999999999999999999999999999 99998864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.25  E-value=1e-11  Score=83.06  Aligned_cols=77  Identities=8%  Similarity=0.101  Sum_probs=56.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.+..++..+|+|++....  .......+..|..++.+..+||||+++++++...+.+|++|||++| +|.+++++
T Consensus        53 ~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~  132 (373)
T 2r5t_A           53 KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR  132 (373)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence            58899999999999999997532  2234556777877754556999999999999999999999999999 99988865

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.25  E-value=5.5e-11  Score=75.52  Aligned_cols=75  Identities=12%  Similarity=0.187  Sum_probs=63.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....++..+|+|.+...... ..+.+.+|+.++..+ +||||+++++++...+..|++|||+++ +|.+++..
T Consensus        24 ~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   99 (277)
T 3f3z_A           24 EVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH   99 (277)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEeCCCCcEEEEEeehhhccc-hHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH
Confidence            4788888899999999999754322 256788999998884 999999999999999999999999999 99887754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.25  E-value=3.7e-11  Score=80.00  Aligned_cols=77  Identities=10%  Similarity=0.182  Sum_probs=64.0

Q ss_pred             cceeEEEcc-------CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARL-------DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~-------~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|....       .+..+|+|++.........+.+.+|+.++..+.+||||+++++++..++.+|++|||+++ +|.
T Consensus        84 ~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~  163 (382)
T 3tt0_A           84 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR  163 (382)
T ss_dssp             EEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             EEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHH
Confidence            356666543       235799999986666666788999999998865999999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       164 ~~l~~  168 (382)
T 3tt0_A          164 EYLQA  168 (382)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.25  E-value=3.9e-11  Score=81.94  Aligned_cols=76  Identities=13%  Similarity=0.122  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++....  .....+.+.+|+.+|.. ++||||+++++++...+.+|++||||++ +|.+.+..
T Consensus        41 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  119 (484)
T 3nyv_A           41 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ-LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS  119 (484)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT
T ss_pred             EEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHh
Confidence            47888899999999999997532  12346778899999887 4999999999999999999999999999 98877653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.24  E-value=8.5e-12  Score=82.89  Aligned_cols=77  Identities=9%  Similarity=0.020  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|....+|+.||+|++....  .....+.+..|..+|....+||||+++++++...+.+|++|||++| +|.++++.
T Consensus        35 ~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~  114 (353)
T 2i0e_A           35 KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ  114 (353)
T ss_dssp             EEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence            57889998999999999997531  1123566788999987755899999999999999999999999999 99998864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.24  E-value=2.6e-11  Score=78.09  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=63.1

Q ss_pred             cceeEEE-----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHH
Q psy13291         11 KPELGLA-----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~-----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~   83 (89)
                      .|++|..     ..+++.+|+|.+.........+.+.+|+.++..+.+||||+++++++..++ .++++|||+++ +|.+
T Consensus        42 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~  121 (316)
T 2xir_A           42 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST  121 (316)
T ss_dssp             EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHH
T ss_pred             eEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHH
Confidence            3566653     356788999999866566667789999999988668999999999987754 59999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       122 ~l~~  125 (316)
T 2xir_A          122 YLRS  125 (316)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            9875

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.24  E-value=1.1e-10  Score=77.44  Aligned_cols=77  Identities=9%  Similarity=0.083  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC---CH----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV---NT----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~---~~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|....+|+.||||++....   ..    ...+.+.+|+.++..+.+||||+++++++...+..|++|||++| +|.
T Consensus       109 ~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~  188 (365)
T 2y7j_A          109 VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF  188 (365)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHH
T ss_pred             EEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHH
Confidence            47788888899999999997542   11    22456789999998865899999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       189 ~~l~~  193 (365)
T 2y7j_A          189 DYLTE  193 (365)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.24  E-value=1.1e-11  Score=84.14  Aligned_cols=76  Identities=13%  Similarity=-0.009  Sum_probs=55.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|++...  ........+..|+.+|.. ++||||+++++++...+.+|++||||++ +|.+++..
T Consensus       163 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~  241 (446)
T 4ejn_A          163 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR  241 (446)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHC-------------CCCC-CSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHH
T ss_pred             EEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHh-CCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHh
Confidence            4788889999999999999753  233345667889999776 5999999999999999999999999999 99888754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.24  E-value=2.5e-11  Score=83.08  Aligned_cols=76  Identities=11%  Similarity=0.115  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++.... .......+.+|+.+|..+ +||||+++++++...+.+|++||||++ +|.+.+..
T Consensus        37 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  114 (486)
T 3mwu_A           37 EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK  114 (486)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHh
Confidence            57889999999999999997421 112356788999999884 999999999999999999999999999 98777643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.24  E-value=5e-12  Score=80.97  Aligned_cols=76  Identities=12%  Similarity=0.254  Sum_probs=50.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|+.+|+|.+.........+.+.+|+.++.. +.||||+++++++...+..|++|||+++ +|.+++..
T Consensus        30 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           30 VVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             CEEEEEC----CEEEEECCC----------------CCCC-CCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhh-cCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHH
Confidence            5778888889999999998754333446678889999877 5999999999999999999999999999 99998863

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.24  E-value=9.9e-11  Score=74.69  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=62.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-------------CCEEEEEecch
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-------------EGDVWICMEVM   77 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-------------~~~~~iv~E~~   77 (89)
                      .|++|.+..+|+.+|+|.+...  ....+.+.+|+.++.. ++||||+++++++..             .+.+|++|||+
T Consensus        21 ~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~   97 (303)
T 1zy4_A           21 QVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLAS-LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYC   97 (303)
T ss_dssp             EEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECC
T ss_pred             EEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHh-cCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecC
Confidence            4788888899999999999653  3446778899999887 599999999998865             35799999999


Q ss_pred             hc-cHHHHHhh
Q psy13291         78 DT-SLDKFYTK   87 (89)
Q Consensus        78 ~~-sL~~~l~~   87 (89)
                      ++ +|.+++..
T Consensus        98 ~~~~L~~~l~~  108 (303)
T 1zy4_A           98 ENGTLYDLIHS  108 (303)
T ss_dssp             CSCBHHHHHHH
T ss_pred             CCCCHHHhhhc
Confidence            99 99999864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.23  E-value=5.1e-11  Score=80.11  Aligned_cols=71  Identities=15%  Similarity=0.124  Sum_probs=59.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++.+..+|+.||+|++...      ..+.+|+.++.+..+||||++++++|..    .+.+||+||||+| +|.+++
T Consensus        77 ~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l  150 (400)
T 1nxk_A           77 KVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI  150 (400)
T ss_dssp             EEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHH
Confidence            5788889999999999999632      2456788887676799999999999876    5679999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       151 ~~  152 (400)
T 1nxk_A          151 QD  152 (400)
T ss_dssp             HC
T ss_pred             HH
Confidence            64

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.23  E-value=4.6e-11  Score=78.11  Aligned_cols=76  Identities=11%  Similarity=-0.001  Sum_probs=56.2

Q ss_pred             cceeEEEc---cCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLAR---LDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~---~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      .|+++...   .+|..+|+|++....   .......+.+|+.+|.. +.||||+++++++...+.+|++|||++| +|.+
T Consensus        32 ~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  110 (327)
T 3a62_A           32 KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM  110 (327)
T ss_dssp             EEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHH-CCCTTBCCEEEEEECSSCEEEEEECCTTEEHHH
T ss_pred             EEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHh-CCCCCccceeEEEEcCCEEEEEEeCCCCCcHHH
Confidence            45666654   689999999997532   12235567889999888 5999999999999999999999999999 9998


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       111 ~l~~  114 (327)
T 3a62_A          111 QLER  114 (327)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.23  E-value=6.5e-11  Score=76.93  Aligned_cols=70  Identities=13%  Similarity=0.131  Sum_probs=59.4

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhhc
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTKV   88 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~~   88 (89)
                      ..+|+.+|+|++.........+.+.+|+.+|..+ .||||+++++++...  ..++++|||+++ +|.+++...
T Consensus        57 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  129 (318)
T 3lxp_A           57 DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH  129 (318)
T ss_dssp             --CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS
T ss_pred             CCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC
Confidence            4578899999998766666678899999999884 899999999999884  689999999999 999998753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.23  E-value=1.8e-11  Score=80.89  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=60.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      .|++|.+..+|+.||+|.+.....  ......+.+|+.+|.. ++||||+++++++..++.++++|||++|+|.+++
T Consensus        24 ~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l   99 (336)
T 3h4j_B           24 KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL-LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYI   99 (336)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECCCCEEHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEECCCCcHHHHH
Confidence            578999999999999999975311  1123568899999877 5999999999999999999999999977655554

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.23  E-value=5.8e-11  Score=77.19  Aligned_cols=73  Identities=16%  Similarity=0.140  Sum_probs=61.3

Q ss_pred             ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |++|.  .+|..+|+|++.... .....+.+.+|+.+|..+ +||||+++++++...+.++++|||+++ +|.+++..
T Consensus        53 V~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  127 (309)
T 3p86_A           53 VHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK  127 (309)
T ss_dssp             EEEEE--ETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHS
T ss_pred             EEEEE--ECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhh
Confidence            45554  478899999997543 445567889999999884 899999999999999999999999999 99999865

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.22  E-value=4.1e-11  Score=75.99  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.+..+|+.+|+|.+....  .....+.+.+|+.++.. ++||||+++++++..++..+++|||+++ +|.+++..
T Consensus        26 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  104 (276)
T 2h6d_A           26 KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL-FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK  104 (276)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhc-CCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhc
Confidence            47888888899999999997531  11224578899999887 5999999999999999999999999999 99998864

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.22  E-value=6.2e-11  Score=75.90  Aligned_cols=76  Identities=11%  Similarity=0.194  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+..... ....+.+.+|+.++.. ++||||+++++++..++..|++|||++++|.+++..
T Consensus        18 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~   94 (299)
T 2r3i_A           18 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA   94 (299)
T ss_dssp             EEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             eEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHH-cCCCCeeeEEEEEecCCceEEEEEcccCCHHHHHHh
Confidence            578888889999999999975422 2224667889999887 599999999999999999999999999988887754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.22  E-value=1.3e-10  Score=75.00  Aligned_cols=72  Identities=18%  Similarity=0.401  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++.+..+|..+|+|.+.....   .+.+.+|+.++.. ++||||+++++++...+.+|++|||+++ +|.+++.
T Consensus        44 ~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  116 (314)
T 3com_A           44 SVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQ-CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR  116 (314)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTSC---CHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEecCchHH---HHHHHHHHHHHHh-CCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHH
Confidence            478888888999999999975422   4567889999887 5999999999999999999999999999 9999886

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.22  E-value=5.2e-11  Score=80.84  Aligned_cols=76  Identities=16%  Similarity=0.305  Sum_probs=61.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~   84 (89)
                      .|++|.+..+|+.||+|.+.... +....+.+.+|+.+|..+ +||||+++++++...     +.+|++|||++++|.++
T Consensus        68 ~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~  146 (458)
T 3rp9_A           68 HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKL  146 (458)
T ss_dssp             CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHH
T ss_pred             EEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEEeccccchhhh
Confidence            57889999999999999997543 344567899999999885 999999999998553     57999999998888888


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       147 ~~~  149 (458)
T 3rp9_A          147 FRT  149 (458)
T ss_dssp             HHS
T ss_pred             ccc
Confidence            764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.22  E-value=1.8e-10  Score=73.66  Aligned_cols=76  Identities=13%  Similarity=0.185  Sum_probs=64.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..++..+|+|.+... .+....+.+.+|+.+|.. ++||||+++++++..    ...++++|||+++ +|.++
T Consensus        41 ~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~  119 (290)
T 1t4h_A           41 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTY  119 (290)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHH
T ss_pred             EEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHh-CCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHH
Confidence            4788888899999999999754 345567788999999887 599999999999876    3579999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       120 l~~  122 (290)
T 1t4h_A          120 LKR  122 (290)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.21  E-value=3.5e-11  Score=84.78  Aligned_cols=76  Identities=9%  Similarity=0.016  Sum_probs=64.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|..||+|++....  .......+.+|+.+|.. ++||||+++++++...+.+|++||||+| +|.+++..
T Consensus       199 ~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~-l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~  277 (576)
T 2acx_A          199 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH  277 (576)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHS
T ss_pred             EEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHH-cCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHh
Confidence            57889999999999999997531  11124567889999988 5999999999999999999999999999 99988864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.21  E-value=3.8e-11  Score=76.28  Aligned_cols=76  Identities=8%  Similarity=0.064  Sum_probs=63.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|+.+|+|.+.....  ....+.+.+|+.++.. ++||||+++++++...+..|++|||+++ +|.+++..
T Consensus        26 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  104 (278)
T 3cok_A           26 GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ-LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN  104 (278)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-BCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHT
T ss_pred             EEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHh-CCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhh
Confidence            477888888999999999974311  1124678899999877 5999999999999999999999999999 99998865

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.21  E-value=4e-11  Score=83.91  Aligned_cols=76  Identities=8%  Similarity=0.003  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.||+|++.....  ....+.+..|..+|.. .+||||+++++++...+.+|++|||++| +|.+++..
T Consensus       200 ~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~-l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~  278 (543)
T 3c4z_A          200 EVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN  278 (543)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHT
T ss_pred             EEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHh-cCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHH
Confidence            588899999999999999975311  1224678899999988 5999999999999999999999999999 99988864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.21  E-value=1.4e-11  Score=79.74  Aligned_cols=76  Identities=14%  Similarity=0.058  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC----EEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.+..+|+.+|+|.+....  +......+.+|+.++.. ++||||+++++++...+    .+|++|||++| +|.+
T Consensus        27 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~  105 (311)
T 3ork_A           27 EVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA-LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD  105 (311)
T ss_dssp             EEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCC-CCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHH
T ss_pred             EEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHc-CCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHH
Confidence            47888888999999999997542  33456778899999776 59999999999987643    46999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       106 ~l~~  109 (311)
T 3ork_A          106 IVHT  109 (311)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.21  E-value=7.7e-11  Score=77.17  Aligned_cols=76  Identities=14%  Similarity=0.171  Sum_probs=61.7

Q ss_pred             cceeEEEccCC----CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDP----DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~----~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|....++    ..+|+|.+...........+.+|+.++.. +.||||+++++++...+..+++|||+++ +|.+++
T Consensus        59 ~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l  137 (333)
T 1mqb_A           59 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ-FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL  137 (333)
T ss_dssp             EEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHH
T ss_pred             EEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHH
Confidence            35666655443    35999999865555566788999999887 5999999999999999999999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       138 ~~  139 (333)
T 1mqb_A          138 RE  139 (333)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.21  E-value=2.3e-10  Score=74.22  Aligned_cols=77  Identities=13%  Similarity=0.043  Sum_probs=62.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|....+|+.||+|++... ...........|+..+....+||||+++++++...+.+|++|||++++|.+++..
T Consensus        72 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~  149 (311)
T 3p1a_A           72 EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEA  149 (311)
T ss_dssp             EEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHh
Confidence            4788888889999999998654 2334455667777777776699999999999999999999999997777776653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.21  E-value=2.4e-11  Score=78.65  Aligned_cols=76  Identities=16%  Similarity=0.251  Sum_probs=63.0

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+.     .++..+|+|.+...........+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.++
T Consensus        40 ~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  118 (322)
T 1p4o_A           40 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY  118 (322)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGG-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHh-cCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHH
Confidence            35566554     35778999999865555566778999999887 5999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       119 l~~  121 (322)
T 1p4o_A          119 LRS  121 (322)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.21  E-value=3.6e-11  Score=78.48  Aligned_cols=76  Identities=4%  Similarity=0.056  Sum_probs=64.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+|+.+|+|.+.... .......+.+|+.++..+.+||||+++++++...+.++++|||+++ +|.+++.
T Consensus        44 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  121 (327)
T 3lm5_A           44 VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL  121 (327)
T ss_dssp             EEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGS
T ss_pred             EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHH
Confidence            47888888999999999997532 2233567889999998876889999999999999999999999999 9888764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.21  E-value=1.5e-11  Score=84.00  Aligned_cols=76  Identities=9%  Similarity=0.014  Sum_probs=62.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++....+|+.+|+|++.....  ......+..|..++.. .+||||+++++++..++.+|++||||+| +|.+++.+
T Consensus        89 ~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~-~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~  167 (437)
T 4aw2_A           89 EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK  167 (437)
T ss_dssp             EEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHH-SCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHT
T ss_pred             EEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHH
Confidence            578888899999999999975211  1112347789999887 5999999999999999999999999999 99999875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.21  E-value=8.7e-11  Score=74.75  Aligned_cols=76  Identities=11%  Similarity=0.050  Sum_probs=63.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..++..+|+|.+......  .....+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus        24 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~  102 (279)
T 3fdn_A           24 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH-LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK  102 (279)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH
T ss_pred             EEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHc-CCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHh
Confidence            4788888999999999999653211  124568889999877 5899999999999999999999999999 99888764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.20  E-value=6.6e-11  Score=78.11  Aligned_cols=73  Identities=10%  Similarity=0.034  Sum_probs=56.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+++.||+|.+....   ..+.+.+|+.+|.. +.||||+++++++..++.++++|||+++ +|.+++..
T Consensus        68 ~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  141 (349)
T 2w4o_A           68 IVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLR-LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE  141 (349)
T ss_dssp             EEEEEEETTTCCEEEEEEEEC-------------CHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT
T ss_pred             EEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHh-CCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHh
Confidence            57888888899999999997542   24567789999988 4999999999999999999999999999 99888754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.20  E-value=7.8e-11  Score=79.76  Aligned_cols=76  Identities=16%  Similarity=0.321  Sum_probs=64.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~   84 (89)
                      .|++|.+..+|+.||+|++.... .....+.+.+|+.+|..+ +||||+++++++...     +.+|++|||++++|.++
T Consensus        41 ~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~  119 (432)
T 3n9x_A           41 YVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKL  119 (432)
T ss_dssp             EEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHH
Confidence            57889999999999999997543 344567899999999884 999999999999776     57999999999988888


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       120 ~~~  122 (432)
T 3n9x_A          120 FKT  122 (432)
T ss_dssp             HHS
T ss_pred             Hhc
Confidence            764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.20  E-value=6.8e-11  Score=74.89  Aligned_cols=73  Identities=16%  Similarity=0.293  Sum_probs=59.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... ++..+|+|.+......  .+.+.+|+.++.. ++||||+++++++..++..+++|||+++ +|.+++..
T Consensus        25 ~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   98 (269)
T 4hcu_A           25 LVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMK-LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT   98 (269)
T ss_dssp             EEEEEEET-TTEEEEEEEECTTSBC--HHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHT
T ss_pred             EEEEEEec-CCCeEEEEEecccccC--HHHHHHHHHHHHh-CCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHh
Confidence            35666654 5677999999754322  3568899999888 4899999999999999999999999999 99999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.20  E-value=2.7e-10  Score=73.35  Aligned_cols=76  Identities=30%  Similarity=0.411  Sum_probs=60.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|....+|+.+|+|.+..............|+..+....+||||+++++++..++.++++|||+.++++.+..
T Consensus        40 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~~~l~~  115 (318)
T 2dyl_A           40 QVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKK  115 (318)
T ss_dssp             CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHH
T ss_pred             eEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEeccCCcHHHHHH
Confidence            5788888889999999999866555445555556554445569999999999999999999999999557766654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=1.6e-10  Score=73.92  Aligned_cols=74  Identities=15%  Similarity=0.188  Sum_probs=60.6

Q ss_pred             ceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++..+  .++..+|+|.+.........+.+.+|+.++..+ +||||+++++++ ..+..+++|||+++ +|.+++..
T Consensus        26 Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~  102 (287)
T 1u59_A           26 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG  102 (287)
T ss_dssp             EEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTT
T ss_pred             EEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHh
Confidence            5566543  467789999998665666678899999999885 999999999998 56679999999999 99998853

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.20  E-value=4e-11  Score=76.50  Aligned_cols=75  Identities=16%  Similarity=0.122  Sum_probs=62.0

Q ss_pred             cceeEEEccCC-------CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDP-------DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~-------~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|+++....++       ..+|+|.+.... ....+.+.+|+.++.. ++||||+++++++..++..+++|||+++ +|.
T Consensus        23 ~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  100 (289)
T 4fvq_A           23 KIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSK-LSHKHLVLNYGVCVCGDENILVQEFVKFGSLD  100 (289)
T ss_dssp             EEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHT-SCCTTBCCEEEEECCTTCCEEEEECCTTCBHH
T ss_pred             eEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHh-CCCCCEeEEEEEEEeCCCCEEEEECCCCCCHH
Confidence            46777777766       469999986432 2346778899999887 5999999999999999999999999998 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       101 ~~l~~  105 (289)
T 4fvq_A          101 TYLKK  105 (289)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.20  E-value=9.7e-11  Score=75.63  Aligned_cols=75  Identities=12%  Similarity=0.119  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++.+..+|+.+|+|.+... .....+.+.+|+.++.. ++||||+++++++..    .+..|++|||+++ +|.+++
T Consensus        44 ~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  121 (317)
T 2buj_A           44 YVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRL-FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI  121 (317)
T ss_dssp             EEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHT-CCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhh-cCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHH
Confidence            4788888899999999999753 34456788999999887 599999999999874    3489999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       122 ~~  123 (317)
T 2buj_A          122 ER  123 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.20  E-value=3.2e-11  Score=77.33  Aligned_cols=75  Identities=12%  Similarity=0.200  Sum_probs=61.2

Q ss_pred             cceeEE----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHH
Q psy13291         11 KPELGL----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.    ...+|+.+|+|.+... .....+.+.+|+.+|.. ++||||+++++++...  ..++++|||+++ +|.+
T Consensus        25 ~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~  102 (295)
T 3ugc_A           25 SVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD  102 (295)
T ss_dssp             EEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHH
T ss_pred             EEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHH
Confidence            356666    4568899999999743 44556788999999888 4999999999998654  569999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       103 ~l~~  106 (295)
T 3ugc_A          103 YLQK  106 (295)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9865

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.20  E-value=1.1e-10  Score=75.18  Aligned_cols=71  Identities=15%  Similarity=0.124  Sum_probs=59.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++.+..+|+.||+|.+...      ..+.+|+.++.+..+||||+++++++..    .+.+|++|||+++ +|.+++
T Consensus        33 ~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  106 (299)
T 3m2w_A           33 KVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI  106 (299)
T ss_dssp             EEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHH
Confidence            4788888899999999999632      2456788888666799999999999987    6689999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       107 ~~  108 (299)
T 3m2w_A          107 QD  108 (299)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.19  E-value=9e-12  Score=81.25  Aligned_cols=76  Identities=12%  Similarity=0.146  Sum_probs=59.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|....+|..+|+|.+...........+.+|+.+|.. +.||||+++++++..++.++++|||++++|.+++..
T Consensus        17 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~   92 (324)
T 3mtl_A           17 TVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD   92 (324)
T ss_dssp             EEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSC-CCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHh-cCCCCCCeeeeEEeeCCEEEEEecccccCHHHHHHh
Confidence            4788888899999999999754333223345679999877 599999999999999999999999999977776653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.19  E-value=1.3e-10  Score=74.29  Aligned_cols=76  Identities=11%  Similarity=0.115  Sum_probs=63.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.+|+|++.... .....+.+.+|+.++.. ++||||+++++++...+..|++|||+++ +|.+++..
T Consensus        37 ~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  114 (287)
T 2wei_A           37 EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK-LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK  114 (287)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHh-ccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHh
Confidence            47888888899999999997532 22335678899999888 4999999999999999999999999999 98877643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.19  E-value=1.9e-10  Score=73.92  Aligned_cols=75  Identities=20%  Similarity=0.189  Sum_probs=62.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEE--------------ECCEEEEEecc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMF--------------REGDVWICMEV   76 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~--------------~~~~~~iv~E~   76 (89)
                      .|++|....+|+.+|+|.+... +....+.+.+|+.++.. ++||||+++++++.              ..+.+|++|||
T Consensus        26 ~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  103 (320)
T 2i6l_A           26 LVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRR-LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY  103 (320)
T ss_dssp             CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEEC
T ss_pred             EEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHh-cCCCCeeEEEEeccccccccccccccccccCceeEEeec
Confidence            5788999899999999999743 44557788999999887 59999999998873              34689999999


Q ss_pred             hhccHHHHHhh
Q psy13291         77 MDTSLDKFYTK   87 (89)
Q Consensus        77 ~~~sL~~~l~~   87 (89)
                      ++++|.++++.
T Consensus       104 ~~~~L~~~~~~  114 (320)
T 2i6l_A          104 METDLANVLEQ  114 (320)
T ss_dssp             CSEEHHHHHTT
T ss_pred             cCCCHHHHhhc
Confidence            99988888764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.19  E-value=1.2e-10  Score=75.37  Aligned_cols=76  Identities=13%  Similarity=0.085  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--------CCEEEEEecchhccHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--------EGDVWICMEVMDTSLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--------~~~~~iv~E~~~~sL~   82 (89)
                      .|+++.+..+|+.+|+|.+... .....+.+.+|+.++..+.+||||+++++++..        ...++++|||++|+|.
T Consensus        43 ~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~  121 (337)
T 3ll6_A           43 FVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLV  121 (337)
T ss_dssp             EEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHH
T ss_pred             EEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHH
Confidence            4788888889999999999654 344567788999999886569999999999953        3469999999999877


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       122 ~~l~~  126 (337)
T 3ll6_A          122 EFLKK  126 (337)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.19  E-value=1.3e-10  Score=75.51  Aligned_cols=75  Identities=11%  Similarity=0.081  Sum_probs=58.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+. +|+.+|+|.+..... ....+.+.+|+.+|..+ +||||+++++++..++.++++||||+++|.+++..
T Consensus        36 ~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~  111 (311)
T 3niz_A           36 VVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE  111 (311)
T ss_dssp             EEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSEEHHHHHHT
T ss_pred             EEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHh
Confidence            46777764 589999999975432 23456788999999884 99999999999999999999999999966665543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.18  E-value=1.3e-10  Score=76.03  Aligned_cols=76  Identities=13%  Similarity=0.097  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~l   85 (89)
                      .|++|.+..+|+.+|+|.+...........+.+|+.++..+ +||||+++++++...     +..|++|||++++|.+++
T Consensus        26 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~  104 (353)
T 2b9h_A           26 VVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI  104 (353)
T ss_dssp             EEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHH
T ss_pred             EEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEeccCccHHHHH
Confidence            57888888899999999997555555667788999999884 999999999987764     689999999999888877


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       105 ~~  106 (353)
T 2b9h_A          105 ST  106 (353)
T ss_dssp             HH
T ss_pred             hh
Confidence            54

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.18  E-value=9.9e-11  Score=74.67  Aligned_cols=76  Identities=11%  Similarity=0.058  Sum_probs=63.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....++..+|+|.+.....  ....+.+.+|+.++.. ++||||+++++++...+..|++|||+++ +|.+++..
T Consensus        29 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  107 (284)
T 2vgo_A           29 NVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH-LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK  107 (284)
T ss_dssp             EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhc-CCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHh
Confidence            478888888999999999974311  1124568889999887 5999999999999999999999999999 99988764

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.17  E-value=4.7e-11  Score=75.26  Aligned_cols=73  Identities=10%  Similarity=-0.062  Sum_probs=60.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++..  .|..+|+|.+.... +....+.+.+|+.++.. ++||||+++++++..+  +.++++|||+++ +|.+++..
T Consensus        26 V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  102 (271)
T 3kmu_A           26 LWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRI-FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE  102 (271)
T ss_dssp             EEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCC-CSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHS
T ss_pred             EEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHh-cCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhh
Confidence            555554  58889999997643 44556789999999877 5999999999999887  789999999999 99999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.17  E-value=2.8e-10  Score=74.04  Aligned_cols=75  Identities=12%  Similarity=0.210  Sum_probs=61.4

Q ss_pred             cceeEE----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHH
Q psy13291         11 KPELGL----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.    ...++..+|+|.+... .....+.+.+|+.++..+ +||||+++++++..  .+.++++|||+++ +|.+
T Consensus        38 ~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~  115 (327)
T 3lxl_A           38 SVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD  115 (327)
T ss_dssp             EEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHH
T ss_pred             EEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEeecCCCCHHH
Confidence            466776    4568899999999744 344567789999998884 99999999999874  4679999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       116 ~l~~  119 (327)
T 3lxl_A          116 FLQR  119 (327)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9865

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.17  E-value=9.5e-11  Score=75.04  Aligned_cols=75  Identities=11%  Similarity=0.103  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+ .+|+.+|+|.+...... ...+.+.+|+.++.. ++||||+++++++...+.++++|||++++|.+++..
T Consensus        17 ~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~   92 (288)
T 1ob3_A           17 VVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV   92 (288)
T ss_dssp             EEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGG-CCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT
T ss_pred             EEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHh-cCCCCEeeeeeEEccCCeEEEEEEecCCCHHHHHHh
Confidence            4677776 67899999999754322 224567889999887 599999999999999999999999999988777754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.17  E-value=5.1e-10  Score=73.53  Aligned_cols=75  Identities=12%  Similarity=0.065  Sum_probs=62.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC----CCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS----DCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~----~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|.+..+|+.+|+|++..  .....+....|+.++..+.    +||||+++++++...+.++++|||+.++|.+++.
T Consensus        50 ~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~  127 (360)
T 3llt_A           50 RVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIIT  127 (360)
T ss_dssp             EEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCCCCBHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCCCCCHHHHHH
Confidence            578888989999999999963  2344566778999988753    4999999999999999999999999449998886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       128 ~  128 (360)
T 3llt_A          128 R  128 (360)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.16  E-value=1.7e-10  Score=76.26  Aligned_cols=76  Identities=17%  Similarity=0.164  Sum_probs=64.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~l   85 (89)
                      .|++|.+..++..||+|.+.........+.+.+|+.+|..+ .||||+++++++...     ..+|++|||++++|.+++
T Consensus        42 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l  120 (364)
T 3qyz_A           42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL  120 (364)
T ss_dssp             EEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEcccCcCHHHHH
Confidence            47888888999999999998655555668899999999884 999999999999765     379999999999888877


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      +.
T Consensus       121 ~~  122 (364)
T 3qyz_A          121 KT  122 (364)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.16  E-value=2.9e-10  Score=75.42  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=61.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.+|+|.+.... .....+.+.+|+.++.. ++||||+++++++...+      .+|++|||++++|.+
T Consensus        40 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  118 (371)
T 2xrw_A           40 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ  118 (371)
T ss_dssp             EEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHH-CCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHh-cCCCCccceEEeeccccccccccceEEEEEcCCCCHHH
Confidence            47788888999999999997643 34456778899999887 59999999999997754      899999999996666


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      ++.
T Consensus       119 ~~~  121 (371)
T 2xrw_A          119 VIQ  121 (371)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=1.1e-10  Score=76.71  Aligned_cols=76  Identities=8%  Similarity=0.107  Sum_probs=59.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|.+..+|+.+|+|.+......    ...+.+.+|+.++.. ++||||+++++++...+..+++|||++++|.+++.
T Consensus        25 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~  103 (346)
T 1ua2_A           25 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE-LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIK  103 (346)
T ss_dssp             EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHH-CCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHT
T ss_pred             EEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhh-CCCCCCCeEEEEEeeCCceEEEEEcCCCCHHHHHH
Confidence            4788888889999999999753221    123467899999888 49999999999999999999999999997777765


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       104 ~  104 (346)
T 1ua2_A          104 D  104 (346)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.15  E-value=2.1e-10  Score=74.80  Aligned_cols=74  Identities=11%  Similarity=0.002  Sum_probs=62.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|.+.....   .+.+..|+.++..+.+||||+++++++...+..+++|||+.++|.+++..
T Consensus        24 ~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~   97 (330)
T 2izr_A           24 ELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL   97 (330)
T ss_dssp             SEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             eEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCCCCHHHHHHH
Confidence            588899889999999999975422   23477899999885599999999999999999999999993399999874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.15  E-value=1.8e-10  Score=72.79  Aligned_cols=73  Identities=16%  Similarity=0.210  Sum_probs=58.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... ++..+|+|.+......  .+.+.+|+.++.. ++||||+++++++..++.++++|||+++ +|.++++.
T Consensus        23 ~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   96 (268)
T 3sxs_A           23 VVKLGKWK-GQYDVAVKMIKEGSMS--EDEFFQEAQTMMK-LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS   96 (268)
T ss_dssp             EEEEEEET-TTEEEEEEEECBTTBC--HHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHH
T ss_pred             eEEEEEec-CceeEEEEEeccCCCc--HHHHHHHHHHHHh-CCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHH
Confidence            35666443 5667999999754322  3568889999988 4899999999999999999999999999 99998864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.15  E-value=2.7e-10  Score=77.18  Aligned_cols=67  Identities=12%  Similarity=0.220  Sum_probs=56.8

Q ss_pred             EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         17 ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        17 ~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      ...+|+.||+|.+...    ..+.+.+|+.+|..+.+||||+++++++..++.+||+||||+|+|.+++..
T Consensus        35 ~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~  101 (434)
T 2rio_A           35 GSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVES  101 (434)
T ss_dssp             EESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHT
T ss_pred             EEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHhc
Confidence            4568999999999743    234567899998876699999999999999999999999998899988865

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.14  E-value=5.1e-11  Score=76.54  Aligned_cols=74  Identities=9%  Similarity=0.094  Sum_probs=58.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-------------------------HHHHHHHHHHHHHHhcCCCCceeeEEeEEE
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-------------------------QEHKRLLTDLDICMRSSDCAHTVQFYGAMF   65 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-------------------------~~~~~~~~E~~il~~~~~hpniv~~~~~~~   65 (89)
                      .|++|.+..+|+.+|+|++......                         ...+.+.+|+.+|.. ++||||+++++++.
T Consensus        28 ~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~  106 (298)
T 2zv2_A           28 VVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK-LDHPNVVKLVEVLD  106 (298)
T ss_dssp             EEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT-CCCTTBCCEEEEEE
T ss_pred             EEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh-CCCCCCCeEEEEEE
Confidence            5788888999999999999753211                         123568899999888 49999999999998


Q ss_pred             E--CCEEEEEecchhc-cHHHHH
Q psy13291         66 R--EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        66 ~--~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .  .+.+|++|||+++ +|.+++
T Consensus       107 ~~~~~~~~lv~e~~~~~~l~~~~  129 (298)
T 2zv2_A          107 DPNEDHLYMVFELVNQGPVMEVP  129 (298)
T ss_dssp             CSSSSEEEEEEECCTTCBSCCSS
T ss_pred             cCCCCEEEEEEecCCCCcHHHHh
Confidence            7  5689999999998 876543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.14  E-value=1.7e-10  Score=72.67  Aligned_cols=73  Identities=16%  Similarity=0.283  Sum_probs=59.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... ++..+|+|.+......  .+.+.+|+.++.. ++||||+++++++..++..+++|||+++ +|.+++..
T Consensus        23 ~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   96 (267)
T 3t9t_A           23 LVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMK-LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT   96 (267)
T ss_dssp             EEEEEEET-TTEEEEEEEECTTTBC--HHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHH
T ss_pred             eEEEEEec-CCCeEEEEEccccCCC--HHHHHHHHHHHHh-CCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhh
Confidence            35666654 6678999999754322  3568899999888 4999999999999999999999999999 99999865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.13  E-value=2.8e-10  Score=72.56  Aligned_cols=75  Identities=19%  Similarity=0.223  Sum_probs=59.9

Q ss_pred             cceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+   +..+|+|.+.........+.+.+|+.++.. ++||||+++++++ .++..|++|||+++ +|.+++.
T Consensus        30 ~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~  107 (281)
T 1mp8_A           30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ  107 (281)
T ss_dssp             EEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHH
T ss_pred             eEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCccceEEEEE-ccCccEEEEecCCCCCHHHHHH
Confidence            3566666543   456999988765555667789999999887 5999999999987 45678999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       108 ~  108 (281)
T 1mp8_A          108 V  108 (281)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.13  E-value=2.1e-10  Score=73.03  Aligned_cols=72  Identities=17%  Similarity=0.206  Sum_probs=58.6

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++... ++..+|+|.+......  .+.+.+|+.++.. +.||||+++++++..++.+|++|||+++ +|.+++..
T Consensus        40 V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (283)
T 3gen_A           40 VKYGKWR-GQYDVAIKMIKEGSMS--EDEFIEEAKVMMN-LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE  112 (283)
T ss_dssp             EEEEEET-TTEEEEEEEECTTSBC--HHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHC
T ss_pred             EEEEEEc-CCCeEEEEEecCCCCC--HHHHHHHHHHHhc-CCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHH
Confidence            5566544 5667999999754322  3568889999888 4899999999999999999999999999 99998864

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.13  E-value=6.5e-10  Score=74.46  Aligned_cols=76  Identities=11%  Similarity=0.130  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCC-CCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSD-CAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~-hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++.... |+.+|+|.+... .+....+.+.+|+.+|..+.+ ||||+++++++..++.+|++||++.++|.+++..
T Consensus        71 ~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~~~~L~~~l~~  148 (390)
T 2zmd_A           71 KVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK  148 (390)
T ss_dssp             EEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecCCCCHHHHHHh
Confidence            466676654 899999999764 344556789999999988643 7999999999999999999999554499998865

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.13  E-value=7e-11  Score=84.20  Aligned_cols=77  Identities=9%  Similarity=0.020  Sum_probs=65.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|....+|+.||+|++....  .....+.+..|..+|....+||||+.+++++...+.+|++|||++| +|.++++.
T Consensus       356 ~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~  435 (674)
T 3pfq_A          356 KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ  435 (674)
T ss_dssp             CEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHh
Confidence            58899999999999999997531  1123556788999988766899999999999999999999999999 99998865

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.12  E-value=3.7e-10  Score=71.63  Aligned_cols=71  Identities=17%  Similarity=0.238  Sum_probs=59.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----------------CCEEEEEe
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----------------EGDVWICM   74 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----------------~~~~~iv~   74 (89)
                      .|+++.+..+|+.+|+|.+....     +.+.+|+.++.. +.||||+++++++..                ...++++|
T Consensus        26 ~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~   99 (284)
T 2a19_B           26 QVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAK-LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQM   99 (284)
T ss_dssp             CEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHH-CCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEE
T ss_pred             EEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHh-CCCCCEEEEeeeEeccccCcccccccccccCcceEEEEE
Confidence            57888888899999999997542     245679999888 499999999998865                34689999


Q ss_pred             cchhc-cHHHHHhh
Q psy13291         75 EVMDT-SLDKFYTK   87 (89)
Q Consensus        75 E~~~~-sL~~~l~~   87 (89)
                      ||+++ +|.+++..
T Consensus       100 e~~~~~~L~~~l~~  113 (284)
T 2a19_B          100 EFCDKGTLEQWIEK  113 (284)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             eccCCCCHHHHHhh
Confidence            99999 99999864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.11  E-value=2.1e-10  Score=74.42  Aligned_cols=75  Identities=13%  Similarity=0.100  Sum_probs=57.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-------CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-------NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-------~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|.+..+|..||+|.+....       .......+.+|+.+|..+ +||||+++++++..++ .|++|||+++ +|.
T Consensus        25 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~  102 (322)
T 2ycf_A           25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELF  102 (322)
T ss_dssp             EEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEEEECCTTEETH
T ss_pred             EEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEEEecCCCCcHH
Confidence            47888888999999999996431       112234578899999884 9999999999986655 8999999999 998


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       103 ~~~~~  107 (322)
T 2ycf_A          103 DKVVG  107 (322)
T ss_dssp             HHHST
T ss_pred             HHHhc
Confidence            87753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.11  E-value=1.5e-10  Score=81.70  Aligned_cols=75  Identities=15%  Similarity=0.187  Sum_probs=59.3

Q ss_pred             cceeEEEcc--CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARL--DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~--~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++..+.  ++..||+|.+.........+.+.+|+.+|.. ++||||+++++++.. +.++++||||++ +|.+++..
T Consensus       351 ~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~-l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~  428 (613)
T 2ozo_A          351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ-LDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVG  428 (613)
T ss_dssp             EEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTT-CCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTT
T ss_pred             EEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHh-CCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhh
Confidence            355565543  4567999999765444456789999999887 599999999999865 569999999999 99998853

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.11  E-value=3e-10  Score=73.93  Aligned_cols=75  Identities=13%  Similarity=0.234  Sum_probs=59.8

Q ss_pred             cceeEE----EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHH
Q psy13291         11 KPELGL----ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~----~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~   83 (89)
                      .|+++.    ...+|+.+|+|.+... .....+.+.+|+.++..+ +||||+++++++...+  .++++|||+++ +|.+
T Consensus        56 ~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~  133 (326)
T 2w1i_A           56 SVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD  133 (326)
T ss_dssp             EEEEEEECTTSSSCCEEEEEEEESSC-CSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEECCCTTCBHHH
T ss_pred             EEEEEEeccccCCCceEEEEEEeccC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEECCCCCCHHH
Confidence            356665    3568899999999754 334567889999998884 9999999999887654  78999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       134 ~l~~  137 (326)
T 2w1i_A          134 YLQK  137 (326)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.11  E-value=3.7e-10  Score=72.30  Aligned_cols=75  Identities=13%  Similarity=0.177  Sum_probs=58.1

Q ss_pred             cceeEE--EccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGL--ARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~--~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++.  ...++..+|+|.+.... +....+.+.+|+.++..+ +||||+++++++ ..+..+++|||+++ +|.+++.
T Consensus        32 ~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~  109 (291)
T 1xbb_A           32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ  109 (291)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHH
T ss_pred             eeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHH
Confidence            355663  34567889999997543 233467789999998874 999999999988 67789999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       110 ~  110 (291)
T 1xbb_A          110 Q  110 (291)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.11  E-value=7.6e-10  Score=71.76  Aligned_cols=73  Identities=5%  Similarity=0.055  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|++....    .+.+.+|+.+|..+.+||||+++++++..  ....+++|||+++ +|.++++.
T Consensus        51 ~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  126 (330)
T 3nsz_A           51 EVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT  126 (330)
T ss_dssp             EEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG
T ss_pred             EEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh
Confidence            57888888999999999996322    45678899999986569999999999988  5689999999999 99988764

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.10  E-value=8.1e-11  Score=83.63  Aligned_cols=75  Identities=13%  Similarity=0.075  Sum_probs=59.5

Q ss_pred             cceeEEEcc-CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE-----EEEEecchhc-cHHH
Q psy13291         11 KPELGLARL-DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD-----VWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~-~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~-----~~iv~E~~~~-sL~~   83 (89)
                      .|+++.... +|+.||+|.+....+......+..|+.+|.. ++||||+++++++...+.     .||||||++| +|.+
T Consensus        95 ~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~  173 (681)
T 2pzi_A           95 WIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE-VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR  173 (681)
T ss_dssp             EEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGG-CCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-
T ss_pred             EEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHh-cCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHH
Confidence            467787766 7899999998765555666788999999887 599999999999987654     7999999999 9877


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      ++.
T Consensus       174 ~~~  176 (681)
T 2pzi_A          174 SKG  176 (681)
T ss_dssp             ---
T ss_pred             HHh
Confidence            654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.10  E-value=4.7e-10  Score=73.55  Aligned_cols=75  Identities=8%  Similarity=0.068  Sum_probs=59.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--------CCEEEEEecchhccH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--------EGDVWICMEVMDTSL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--------~~~~~iv~E~~~~sL   81 (89)
                      .|++|.+..+|+.+|+|.+..... ......+.+|+.+|.. ++||||+++++++..        .+.+|++|||++++|
T Consensus        32 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l  110 (351)
T 3mi9_A           32 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL  110 (351)
T ss_dssp             SEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHH-CCCTTBCCEEEEEEEC--------CEEEEEEECCSEEH
T ss_pred             EEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHh-ccCCCcccHhheeeccccccccCCceEEEEEeccCCCH
Confidence            588999999999999999965422 2234567789999888 489999999999987        347999999999955


Q ss_pred             HHHHh
Q psy13291         82 DKFYT   86 (89)
Q Consensus        82 ~~~l~   86 (89)
                      .+.+.
T Consensus       111 ~~~l~  115 (351)
T 3mi9_A          111 AGLLS  115 (351)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            55443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.10  E-value=3e-10  Score=77.77  Aligned_cols=74  Identities=15%  Similarity=0.167  Sum_probs=60.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.||+|++.... .....+.+.+|+.+|.. ++||||+++++++...      ..+|++||||++++.+
T Consensus        77 ~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~  155 (464)
T 3ttj_A           77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ  155 (464)
T ss_dssp             EEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHh-CCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHH
Confidence            57888889999999999997542 34456788999999888 4999999999999764      4689999999995544


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      .+
T Consensus       156 ~~  157 (464)
T 3ttj_A          156 VI  157 (464)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.10  E-value=3.1e-10  Score=75.44  Aligned_cols=76  Identities=12%  Similarity=0.103  Sum_probs=62.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.||+|.+.... .....+.+.+|+.+|..+ +||||+++++++...      ..+|++|||+.++|.+
T Consensus        40 ~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~  118 (367)
T 1cm8_A           40 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK  118 (367)
T ss_dssp             CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEEEecCCCCHHH
Confidence            57888889999999999996543 344567889999999884 899999999999775      3579999999449999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       119 ~~~~  122 (367)
T 1cm8_A          119 LMKH  122 (367)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            8864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.08  E-value=4.2e-10  Score=76.59  Aligned_cols=70  Identities=19%  Similarity=0.212  Sum_probs=57.1

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++..  .|..||+|.+....   ..+.+.+|+.+|.. ++||||+++++++...+ .+||+||||++ +|.++++.
T Consensus       209 V~~~~~--~~~~vavK~~~~~~---~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~  280 (450)
T 1k9a_A          209 VMLGDY--RGNKVAVKCIKNDA---TAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS  280 (450)
T ss_dssp             EEEEEE--TTEEEEEEEESSCT---TSHHHHHHHHHHHT-CCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEe--cCCeEEEEEeCCch---HHHHHHHHHHHHHh-ccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHh
Confidence            444443  57899999997542   35678899999887 59999999999988765 79999999999 99999875

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.08  E-value=4.5e-11  Score=77.56  Aligned_cols=75  Identities=11%  Similarity=0.050  Sum_probs=58.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.. .+|..+|+|.+...........+.+|+.++.. ..||||+++++++..++..+++|||+++ +|.+++..
T Consensus        45 ~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  120 (326)
T 3uim_A           45 KVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE  120 (326)
T ss_dssp             EEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGT-CCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHC
T ss_pred             EEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHh-ccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHh
Confidence            3556642 36889999999754332223357889999877 5999999999999999999999999999 99999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.08  E-value=5.2e-10  Score=71.48  Aligned_cols=76  Identities=11%  Similarity=0.016  Sum_probs=61.0

Q ss_pred             cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE-EEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD-VWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~-~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|....++.   .+|+|.+.........+.+.+|+.++.. ++||||+++++++...+. .+++|||+.+ +|.+++
T Consensus        36 ~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~  114 (298)
T 3pls_A           36 VVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI  114 (298)
T ss_dssp             EEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHT-CCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHH
T ss_pred             eEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHH
Confidence            356666554444   7999999765555667889999999887 499999999999987665 4999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       115 ~~  116 (298)
T 3pls_A          115 RS  116 (298)
T ss_dssp             HC
T ss_pred             hc
Confidence            64

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.07  E-value=1.7e-10  Score=77.89  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=57.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-------CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-------NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-------~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|....++..+|+|++....       .......+.+|+.+|.++ +||||+++++++ ..+..|++||||++ +|.
T Consensus       150 ~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~-~~~~~~lv~e~~~~g~L~  227 (419)
T 3i6u_A          150 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELF  227 (419)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEE-ESSEEEEEEECCTTCBGG
T ss_pred             EEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEE-ecCceEEEEEcCCCCcHH
Confidence            57888999999999999997531       111233578899999884 999999999986 45668999999999 987


Q ss_pred             HHHh
Q psy13291         83 KFYT   86 (89)
Q Consensus        83 ~~l~   86 (89)
                      +++.
T Consensus       228 ~~l~  231 (419)
T 3i6u_A          228 DKVV  231 (419)
T ss_dssp             GGTS
T ss_pred             HHHh
Confidence            7664

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.07  E-value=4.2e-10  Score=71.76  Aligned_cols=73  Identities=14%  Similarity=0.085  Sum_probs=58.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH---HHH---HHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT---QEH---KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~---~~~---~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|....+++.+|+|.+......   ...   +.+.+|+.++.. ++||||+++++++....  +++|||+++ +|.+
T Consensus        34 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~  110 (287)
T 4f0f_A           34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN-LNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYH  110 (287)
T ss_dssp             CEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTT-CCCTTBCCEEEEETTTT--EEEEECCTTCBHHH
T ss_pred             eEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHh-CCCCCchhhheeecCCC--eEEEEecCCCCHHH
Confidence            5788888899999999999653221   111   678899999887 49999999999886555  799999998 9977


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      .+.
T Consensus       111 ~l~  113 (287)
T 4f0f_A          111 RLL  113 (287)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.07  E-value=7.1e-10  Score=72.19  Aligned_cols=72  Identities=14%  Similarity=0.066  Sum_probs=55.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC----EEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+++..  .|+.||+|++...  .........|+.+|.. ++||||+++++++...+    .+|++||||++ +|.+++
T Consensus        39 ~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  113 (322)
T 3soc_A           39 CVWKAQL--LNEYVAVKIFPIQ--DKQSWQNEYEVYSLPG-MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL  113 (322)
T ss_dssp             EEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHTSTT-CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEEE--CCCEEEEEEeecC--chHHHHHHHHHHHHhc-CCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHH
Confidence            3566644  5889999999643  2234455668888776 59999999999998743    58999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      +.
T Consensus       114 ~~  115 (322)
T 3soc_A          114 KA  115 (322)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.07  E-value=3.9e-10  Score=71.25  Aligned_cols=73  Identities=10%  Similarity=0.088  Sum_probs=54.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCH---HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNT---QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~---~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++..  +|..+|+|.+......   ...+.+.+|+.++.. .+||||+++++++..++..|++|||+++ +|.+++..
T Consensus        23 V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           23 VYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM-LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG   99 (271)
T ss_dssp             EEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHH-CCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS
T ss_pred             EEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHh-cCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc
Confidence            455554  5889999998754221   234678899999887 5999999999999999999999999999 99998753

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.06  E-value=2.4e-09  Score=70.25  Aligned_cols=76  Identities=11%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++.. .+++.+|+|.+.... .....+.+.+|+.+|..+.+| |||+++++++..++.+|++||++.++|.+++..
T Consensus        24 ~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~  101 (343)
T 3dbq_A           24 KVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK  101 (343)
T ss_dssp             EEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHH
T ss_pred             EEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCCCCCHHHHHHh
Confidence            3566665 468899999997643 444567889999999886433 999999999999999999999655599888865

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.05  E-value=6.5e-10  Score=78.80  Aligned_cols=75  Identities=13%  Similarity=0.142  Sum_probs=58.8

Q ss_pred             cceeEEE--ccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLA--RLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~--~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+++..  ..++..+|+|++... .+....+.+.+|+.+|..+ +||||+++++++. .+..+++||||++ +|.++++
T Consensus       384 ~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~  461 (635)
T 4fl3_A          384 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ  461 (635)
T ss_dssp             EEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccCCCCHHHHHh
Confidence            3555533  346678999999753 2333467899999999884 9999999999885 4568999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       462 ~  462 (635)
T 4fl3_A          462 Q  462 (635)
T ss_dssp             H
T ss_pred             h
Confidence            5

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.05  E-value=1.2e-10  Score=75.67  Aligned_cols=74  Identities=16%  Similarity=0.113  Sum_probs=60.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.. .+|..+|+|.+.... ....+.+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus        54 ~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  128 (321)
T 2qkw_B           54 KVYKGVL-RDGAKVALKRRTPES-SQGIEEFETEIETLSF-CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG  128 (321)
T ss_dssp             EEEEEEC-TTCCEEEEEECCSCC-SSHHHHHHHHHHGGGS-CCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSS
T ss_pred             eEEEEEE-CCCCEEEEEEecccC-hHHHHHHHHHHHHHHh-CCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhc
Confidence            4666764 468999999887543 2346778899999877 5999999999999999999999999999 99887643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.05  E-value=1.3e-10  Score=76.75  Aligned_cols=77  Identities=9%  Similarity=-0.029  Sum_probs=60.7

Q ss_pred             cceeEEEc---cCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLAR---LDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~---~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      .|+++...   .+|+.+|+|++....   .....+.+..|+.+|..+.+||||+++++++...+.+|++|||+++ +|.+
T Consensus        69 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  148 (355)
T 1vzo_A           69 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT  148 (355)
T ss_dssp             EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHH
T ss_pred             EEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHH
Confidence            46667664   489999999986421   1122345667888988865899999999999999999999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       149 ~l~~  152 (355)
T 1vzo_A          149 HLSQ  152 (355)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.05  E-value=7.6e-10  Score=71.13  Aligned_cols=73  Identities=11%  Similarity=0.119  Sum_probs=59.8

Q ss_pred             ceeEEEccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+.+.  .++..+|+|.+....   .....+.+.+|+.++..+ .||||+++++++...+..+++|||+++ +|.+++..
T Consensus        47 Vy~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (307)
T 2nru_A           47 VYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC  123 (307)
T ss_dssp             EEEEE--SSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             EEEEE--ECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh
Confidence            45554  478899999997532   233467789999999884 999999999999999999999999999 99998863

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.04  E-value=6.1e-10  Score=72.13  Aligned_cols=76  Identities=11%  Similarity=0.146  Sum_probs=53.6

Q ss_pred             cceeEEEccCCC---EEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEE------EEEecchhc-
Q psy13291         11 KPELGLARLDPD---SEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDV------WICMEVMDT-   79 (89)
Q Consensus        11 ~~~l~~~~~~~~---~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~------~iv~E~~~~-   79 (89)
                      .|++|....++.   .+|+|.+.... .....+.+.+|+.++.. ++||||+++++++...+..      +++|||+++ 
T Consensus        38 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~  116 (323)
T 3qup_A           38 SVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE-FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG  116 (323)
T ss_dssp             EEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTT-CCCTTBCCCCEEEECC-------CEEEEEECCTTC
T ss_pred             EEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHH-CCCCceehhhceeeccccccCCCccEEEEEeccCC
Confidence            466776666664   79999997542 33457789999999887 4999999999999876654      999999999 


Q ss_pred             cHHHHHhh
Q psy13291         80 SLDKFYTK   87 (89)
Q Consensus        80 sL~~~l~~   87 (89)
                      +|.+++..
T Consensus       117 ~L~~~l~~  124 (323)
T 3qup_A          117 DLHAFLLA  124 (323)
T ss_dssp             BHHHHHHH
T ss_pred             cHHHHHHh
Confidence            99998853

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.04  E-value=9.2e-10  Score=73.23  Aligned_cols=70  Identities=11%  Similarity=-0.001  Sum_probs=55.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----------------------
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----------------------   67 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----------------------   67 (89)
                      .|++|.+..+|..||+|.+......     ..+|+.+|.. ++||||+++++++...                       
T Consensus        22 ~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (383)
T 3eb0_A           22 IVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKV-LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNG   95 (383)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTT-CCCTTBCCEEEEEEEC-----------------------
T ss_pred             EEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHH-cCCCCccchhheeeecCcccccccccccccccccccccc
Confidence            4788888999999999999754221     2358999877 5999999999998543                       


Q ss_pred             ---------------CEEEEEecchhccHHHHHh
Q psy13291         68 ---------------GDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        68 ---------------~~~~iv~E~~~~sL~~~l~   86 (89)
                                     ..++++|||++++|.+++.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~  129 (383)
T 3eb0_A           96 VNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLK  129 (383)
T ss_dssp             --------------CCEEEEEECCCSEEHHHHHH
T ss_pred             cccccccccccCCCceEEEEEEecCCccHHHHHH
Confidence                           3489999999997777665

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.04  E-value=6.4e-10  Score=70.80  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=58.8

Q ss_pred             cceeEEEcc---CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARL---DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+.+....   ++..+|+|.+.........+.+.+|+.++..+ +||||+++++++.. +..|++|||+++ +|.+++.
T Consensus        27 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~  104 (281)
T 3cc6_A           27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLE  104 (281)
T ss_dssp             EEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHH
T ss_pred             eEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHH
Confidence            356665433   33469999998655555678899999999885 99999999998754 457899999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       105 ~  105 (281)
T 3cc6_A          105 R  105 (281)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.03  E-value=8.5e-10  Score=74.95  Aligned_cols=68  Identities=10%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             EEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         16 LARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        16 ~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      ....+|+.||||.+.....    ..+.+|+.+|..+.+||||+++++++...+.+||+||||+|+|.+++..
T Consensus        43 ~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~  110 (432)
T 3p23_A           43 RGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQ  110 (432)
T ss_dssp             EEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHS
T ss_pred             EEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCCHHHHHHh
Confidence            4456899999999964321    2245689998886589999999999999999999999999988888764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.02  E-value=9.7e-10  Score=70.48  Aligned_cols=76  Identities=8%  Similarity=0.082  Sum_probs=58.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l   85 (89)
                      .|+.+.+..++..+|+|.+....   .....+.+.+|+.++.. ++||||+++++++..  .+..|++|||+++++.+++
T Consensus        20 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~   98 (305)
T 2wtk_C           20 KVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR-LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML   98 (305)
T ss_dssp             EEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEECC---CEEEEEECCSEEHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHh-cCCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHH
Confidence            47788888899999999997531   12345678899999887 599999999999854  4589999999999666655


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus        99 ~~  100 (305)
T 2wtk_C           99 DS  100 (305)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.02  E-value=2.2e-09  Score=68.51  Aligned_cols=74  Identities=9%  Similarity=-0.017  Sum_probs=61.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+.....   .+.+.+|+.++..+.+|||++++++++...+..+++|||+.++|.+++..
T Consensus        25 ~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~   98 (298)
T 1csn_A           25 VIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL   98 (298)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecCCCHHHHHHH
Confidence            578888889999999999975322   23466788898886699999999999999999999999993399999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.02  E-value=2.3e-10  Score=75.17  Aligned_cols=77  Identities=12%  Similarity=0.033  Sum_probs=62.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-------HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchh-c-cH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-------TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD-T-SL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-------~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~-~-sL   81 (89)
                      .|++|.+..+|..+|+|.+.....       ....+.+.+|+.+|..+ +||||+++++++...+.++++|||+. | +|
T Consensus        39 ~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l  117 (335)
T 3dls_A           39 FVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDL  117 (335)
T ss_dssp             SEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTSCBH
T ss_pred             EEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEEEEeCCCCccH
Confidence            588899999999999999975421       11234567799998874 99999999999999999999999885 4 89


Q ss_pred             HHHHhhc
Q psy13291         82 DKFYTKV   88 (89)
Q Consensus        82 ~~~l~~~   88 (89)
                      .+++...
T Consensus       118 ~~~~~~~  124 (335)
T 3dls_A          118 FAFIDRH  124 (335)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhc
Confidence            9888653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.02  E-value=2.3e-09  Score=70.29  Aligned_cols=71  Identities=15%  Similarity=0.014  Sum_probs=54.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|+.||+|++...  ..    ...|+..+....+||||+++++++..    ...++++||||+| +|.+++
T Consensus        44 ~V~~~~~~~~~~~vavK~~~~~--~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l  117 (336)
T 3fhr_A           44 KVLECFHRRTGQKCALKLLYDS--PK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRI  117 (336)
T ss_dssp             EEEEEEETTTCCEEEEEEEESS--HH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEecCc--HH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHH
Confidence            5788889999999999999642  22    22334343444699999999999876    4469999999999 999988


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       118 ~~  119 (336)
T 3fhr_A          118 QE  119 (336)
T ss_dssp             HT
T ss_pred             Hh
Confidence            65

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.01  E-value=7.4e-10  Score=70.93  Aligned_cols=75  Identities=16%  Similarity=0.126  Sum_probs=58.4

Q ss_pred             ceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHh
Q psy13291         12 PELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        12 ~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      |++|....++   ..+|+|.+.........+.+.+|+.++.. ++||||+++++.+.. ++..+++|||+++ +|.++++
T Consensus        41 Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~  119 (298)
T 3f66_A           41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR  119 (298)
T ss_dssp             EEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHT-CCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHh-CCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHH
Confidence            5566544332   35899998765566667889999999887 599999999998654 5689999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       120 ~  120 (298)
T 3f66_A          120 N  120 (298)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.01  E-value=7.8e-10  Score=75.27  Aligned_cols=72  Identities=11%  Similarity=0.081  Sum_probs=57.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... .+..||+|.+.....  ..+.+.+|+.+|.. ++||||+++++++. .+.+|++||||++ +|.++++.
T Consensus       203 ~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~-l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~  275 (454)
T 1qcf_A          203 EVWMATYN-KHTKVAVKTMKPGSM--SVEAFLAEANVMKT-LQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKS  275 (454)
T ss_dssp             EEEEEEET-TTEEEEEEEECTTSB--CHHHHHHHHHHHTT-CCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHS
T ss_pred             EEEEEEEC-CccEEEEEEecCCCc--cHHHHHHHHHHHhh-CCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHh
Confidence            35555543 466799999975322  36678999999887 59999999999876 6679999999999 99999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.01  E-value=9.8e-11  Score=83.81  Aligned_cols=76  Identities=9%  Similarity=0.023  Sum_probs=64.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE------CCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR------EGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~------~~~~~iv~E~~~~-sL~~   83 (89)
                      .|+++.+..+|..||+|.+.........+.+.+|+.+|..+ +||||+++++++..      .+..|++||||+| +|.+
T Consensus        29 ~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~  107 (676)
T 3qa8_A           29 YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK  107 (676)
T ss_dssp             BCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHH
T ss_pred             EEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHH
Confidence            46778888899999999997665666678899999999884 99999999998755      5688999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       108 ~L~~  111 (676)
T 3qa8_A          108 YLNQ  111 (676)
T ss_dssp             HHHS
T ss_pred             HHHh
Confidence            9875

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.01  E-value=2.2e-09  Score=69.12  Aligned_cols=77  Identities=9%  Similarity=0.024  Sum_probs=58.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcC--CCCceeeEEeEEEECC-----EEEEEecchhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSS--DCAHTVQFYGAMFREG-----DVWICMEVMDT   79 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~--~hpniv~~~~~~~~~~-----~~~iv~E~~~~   79 (89)
                      .|++|.+..+|+.||+|.+.....    ......+.+|+.++..+.  .||||+++++++....     .++++|||+++
T Consensus        24 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~  103 (308)
T 3g33_A           24 TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ  103 (308)
T ss_dssp             CEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC
T ss_pred             EEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhc
Confidence            578898889999999999975321    111234556777766532  5999999999998865     68999999999


Q ss_pred             cHHHHHhh
Q psy13291         80 SLDKFYTK   87 (89)
Q Consensus        80 sL~~~l~~   87 (89)
                      +|.+++..
T Consensus       104 ~L~~~~~~  111 (308)
T 3g33_A          104 DLRTYLDK  111 (308)
T ss_dssp             BHHHHHHT
T ss_pred             CHHHHHhh
Confidence            88888765

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.01  E-value=4.3e-10  Score=74.67  Aligned_cols=77  Identities=9%  Similarity=-0.068  Sum_probs=56.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhc--CCCCceeeEE-------eEEEECC-----------
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRS--SDCAHTVQFY-------GAMFREG-----------   68 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~--~~hpniv~~~-------~~~~~~~-----------   68 (89)
                      .|++|....+|+.||+|++...  ......+.+.+|+.++..+  ..||||++++       +++..++           
T Consensus        88 ~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (377)
T 3byv_A           88 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDE  167 (377)
T ss_dssp             EEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC----
T ss_pred             EEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCC
Confidence            4678888889999999999753  2334567888999554432  3899999988       5555443           


Q ss_pred             ------EEEEEecchhccHHHHHhh
Q psy13291         69 ------DVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        69 ------~~~iv~E~~~~sL~~~l~~   87 (89)
                            ..|++|||++|+|.+++..
T Consensus       168 ~~~~i~~~~lv~E~~~g~L~~~l~~  192 (377)
T 3byv_A          168 RDMWVLSRFFLYPRMQSNLQTFGEV  192 (377)
T ss_dssp             --CEEESEEEEEECCSEEHHHHHHH
T ss_pred             CceEEEEEEEEEeccCCCHHHHHHh
Confidence                  3899999996699988864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.00  E-value=7.5e-10  Score=73.45  Aligned_cols=75  Identities=11%  Similarity=0.124  Sum_probs=61.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEE------EEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDV------WICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~------~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.||+|.+.... .......+.+|+.++.. ++||||+++++++...+..      |++|||++++|.+
T Consensus        57 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  135 (371)
T 4exu_A           57 SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQK  135 (371)
T ss_dssp             EEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHh-cCCCCchhhhhheeccCCcccceeEEEEEccccccHHH
Confidence            47888889999999999997543 34456788899999888 4999999999999876644      9999999997776


Q ss_pred             HHh
Q psy13291         84 FYT   86 (89)
Q Consensus        84 ~l~   86 (89)
                      ++.
T Consensus       136 ~~~  138 (371)
T 4exu_A          136 IMG  138 (371)
T ss_dssp             HTT
T ss_pred             Hhh
Confidence            653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.00  E-value=3.1e-09  Score=69.12  Aligned_cols=71  Identities=11%  Similarity=0.158  Sum_probs=57.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhc-CCCCceeeEEeEEEECC----EEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRS-SDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~-~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++..  +|+.+|+|.+...    ....+..|.+++... .+||||+++++++...+    .+|++|||+++ +|.++
T Consensus        57 ~Vy~~~~--~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  130 (342)
T 1b6c_B           57 EVWRGKW--RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY  130 (342)
T ss_dssp             EEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHH
T ss_pred             EEEEEEE--cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHH
Confidence            3555554  6899999998632    245677788887763 59999999999998876    89999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +++
T Consensus       131 l~~  133 (342)
T 1b6c_B          131 LNR  133 (342)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            865

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.99  E-value=2.3e-09  Score=76.29  Aligned_cols=75  Identities=19%  Similarity=0.228  Sum_probs=60.4

Q ss_pred             cceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|....+   +..+|+|.+.........+.+.+|+.+|.. ++||||+++++++ .++..|++|||+++ +|.++++
T Consensus       405 ~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~-~~~~~~lv~E~~~~g~L~~~l~  482 (656)
T 2j0j_A          405 DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ  482 (656)
T ss_dssp             CEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEE-CSSSCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEE-ecCceEEEEEcCCCCcHHHHHH
Confidence            4667766543   456999988765556667889999999888 5999999999987 45678999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       483 ~  483 (656)
T 2j0j_A          483 V  483 (656)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.98  E-value=2.7e-09  Score=71.46  Aligned_cols=72  Identities=8%  Similarity=0.066  Sum_probs=57.2

Q ss_pred             cceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|.+.  .++..+|+|.+.....   ...+.+|+.+|.. +.||||+++++++..  ...+|++|||++++|.+++.
T Consensus        36 ~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~  111 (405)
T 3rgf_A           36 HVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRE-LKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK  111 (405)
T ss_dssp             EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHH-CCCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHH
T ss_pred             EEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHh-cCCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHH
Confidence            47778765  5788999999975432   2357789999988 489999999999976  56899999999997666654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.98  E-value=8.4e-10  Score=75.14  Aligned_cols=72  Identities=15%  Similarity=0.140  Sum_probs=56.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.... +..+|+|.+......  .+.+.+|+.+|.. ++||||+++++++.. +.++|+||||++ +|.++++.
T Consensus       199 ~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~E~~~l~~-l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          199 EVWMGTWNG-TTRVAIKTLKPGTMS--PEAFLQEAQVMKK-LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  271 (452)
T ss_dssp             EEEEEEETT-TEEEEEEECCTTSSC--HHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSH
T ss_pred             EEEEEEECC-CceEEEEEeccCCCC--HHHHHHHHHHHHh-CCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHh
Confidence            355665543 356999999753322  4578899999988 499999999998765 678999999999 99999863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.98  E-value=1.9e-09  Score=70.26  Aligned_cols=75  Identities=13%  Similarity=0.147  Sum_probs=52.7

Q ss_pred             cceeEEEccCCCEE----EEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSE----WSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~----AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|..+    |+|.+.........+.+.+|+.++.. ++||||+++++++..++ .++++||+++ +|.+++
T Consensus        30 ~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l  107 (327)
T 3poz_A           30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV  107 (327)
T ss_dssp             EEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHH-CCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHH
T ss_pred             EEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHH
Confidence            46778777777654    77777544333445778899999988 49999999999998755 7788999999 999888


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       108 ~~  109 (327)
T 3poz_A          108 RE  109 (327)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.97  E-value=1.1e-09  Score=76.15  Aligned_cols=72  Identities=15%  Similarity=0.134  Sum_probs=56.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++.... +..||+|.+.....  ..+.+.+|+.+|.. ++||||+++++++.. +.+||+||||++ +|.++++.
T Consensus       282 ~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~-l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          282 EVWMGTWNG-TTRVAIKTLKPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  354 (535)
T ss_dssp             EEEEEEETT-TEEEEEEEECTTSS--CHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSH
T ss_pred             EEEEEEECC-CceEEEEEeCCCCC--CHHHHHHHHHHHHh-CCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhh
Confidence            355665543 35699999975332  24578899999988 599999999998765 679999999999 99999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.97  E-value=2.8e-09  Score=69.81  Aligned_cols=71  Identities=15%  Similarity=0.101  Sum_probs=53.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-------EEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-------DVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-------~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|..+|+|.+......  ......|+..+.. ++||||+++++++...+       .++++|||++++|.+
T Consensus        38 ~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  114 (360)
T 3e3p_A           38 TVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAV-LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHR  114 (360)
T ss_dssp             -CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHH-HCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHH
T ss_pred             EEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHh-cCCCCcccHHHhhhccccccccceeEEEEeecccccHHH
Confidence            5888999999999999998653221  2344556777666 49999999999997643       389999999995444


Q ss_pred             H
Q psy13291         84 F   84 (89)
Q Consensus        84 ~   84 (89)
                      .
T Consensus       115 ~  115 (360)
T 3e3p_A          115 C  115 (360)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.97  E-value=7.9e-09  Score=66.69  Aligned_cols=76  Identities=11%  Similarity=0.142  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCC-CCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSD-CAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~-hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++... +|+.+|+|.+... .+....+.+.+|+.++..+.+ ||||+++++++..++.++++||+..++|.+++..
T Consensus        43 ~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~  120 (313)
T 3cek_A           43 KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK  120 (313)
T ss_dssp             EEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHH
T ss_pred             EEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecCCCcHHHHHHh
Confidence            45666654 5889999999764 344556788999999988643 7999999999999999999999655599988865

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.96  E-value=7.6e-09  Score=70.07  Aligned_cols=75  Identities=7%  Similarity=0.063  Sum_probs=61.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC-----CCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS-----DCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~-----~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      .|++|.+..+++.||+|++...  ....+.+..|+.++..+.     +||||+++++.+...+.++++|||++++|.+++
T Consensus       112 ~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l  189 (429)
T 3kvw_A          112 QVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELI  189 (429)
T ss_dssp             EEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCCCBHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccCCCHHHHH
Confidence            4788888899999999999642  344566777888876532     688999999999999999999999988877777


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       190 ~~  191 (429)
T 3kvw_A          190 KK  191 (429)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.96  E-value=7.2e-11  Score=77.11  Aligned_cols=71  Identities=18%  Similarity=0.139  Sum_probs=58.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CH--------------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEe
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NT--------------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICM   74 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~--------------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~   74 (89)
                      .|++|..  +|..+|+|.+....  ..              ...+.+.+|+.++.. ++||||+++++++..++.++++|
T Consensus        46 ~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~  122 (348)
T 2pml_X           46 KIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD-IKNEYCLTCEGIITNYDEVYIIY  122 (348)
T ss_dssp             CEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTT-CCCTTBCCCSEEEESSSEEEEEE
T ss_pred             EEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHh-CCCCCcceEEEEEeeCCeEEEEE
Confidence            4677776  89999999997421  10              012778899999887 48999999999999999999999


Q ss_pred             cchhc-cHHHH
Q psy13291         75 EVMDT-SLDKF   84 (89)
Q Consensus        75 E~~~~-sL~~~   84 (89)
                      ||+++ +|.++
T Consensus       123 e~~~~~~L~~~  133 (348)
T 2pml_X          123 EYMENDSILKF  133 (348)
T ss_dssp             ECCTTCBSSEE
T ss_pred             eccCCCcHHHH
Confidence            99999 98876

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.96  E-value=3e-09  Score=70.43  Aligned_cols=77  Identities=12%  Similarity=0.001  Sum_probs=49.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcC-CCCceeeEE-------eEEEEC-------------
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSS-DCAHTVQFY-------GAMFRE-------------   67 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~-~hpniv~~~-------~~~~~~-------------   67 (89)
                      .|++|.+..+|+.+|+|++.....  ....+.+..|+.++..+. .||||++++       +.+..+             
T Consensus        77 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~  156 (371)
T 3q60_A           77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQD  156 (371)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC--
T ss_pred             EEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcc
Confidence            478888889999999999986532  334566777855544422 699988865       444433             


Q ss_pred             ----CEEEEEecchhccHHHHHhh
Q psy13291         68 ----GDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        68 ----~~~~iv~E~~~~sL~~~l~~   87 (89)
                          +.+||+||||+++|.+++..
T Consensus       157 ~~~~~~~~lv~e~~~~~L~~~l~~  180 (371)
T 3q60_A          157 DYAVANYLLLMPAASVDLELLFST  180 (371)
T ss_dssp             -CCEEEEEEEECCCSEEHHHHHHH
T ss_pred             cceeeeEEEEecCCCCCHHHHHHH
Confidence                34899999999999988864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.95  E-value=2.7e-09  Score=67.69  Aligned_cols=72  Identities=14%  Similarity=0.192  Sum_probs=55.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++... ++..+|+|.+.....  ..+.+.+|+.++..+ +||||+++++++. .+..+++|||+++ +|.+++..
T Consensus        28 ~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~  100 (279)
T 1qpc_A           28 EVWMGYYN-GHTKVAVKSLKQGSM--SPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKT  100 (279)
T ss_dssp             EEEEEEET-TTEEEEEEEECTTSS--CHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTS
T ss_pred             EEEEEEEc-CCcEEEEEEecCCcc--cHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhc
Confidence            35556543 456799999975432  246788999999884 9999999999875 5568999999999 99998863

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.95  E-value=3.9e-09  Score=68.03  Aligned_cols=75  Identities=8%  Similarity=0.097  Sum_probs=56.1

Q ss_pred             cceeEEEcc---CCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhc-c
Q psy13291         11 KPELGLARL---DPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~---~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~-s   80 (89)
                      .|+.|....   ++..+|+|.+... ......+.+.+|+.++.. ++||||+++++++...+     ..+++|||+++ +
T Consensus        49 ~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~  127 (313)
T 3brb_A           49 SVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKD-FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGD  127 (313)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHT-CCCTTBCCCCEEEEC-------CEEEEEECCTTCB
T ss_pred             EEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhc-CCCCCeeeeeEEEeeccccCCcccEEEEecccCCC
Confidence            456665544   4558999999754 344556788999999887 59999999999987754     46999999999 9


Q ss_pred             HHHHHh
Q psy13291         81 LDKFYT   86 (89)
Q Consensus        81 L~~~l~   86 (89)
                      |.+++.
T Consensus       128 L~~~l~  133 (313)
T 3brb_A          128 LHTYLL  133 (313)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999884

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.94  E-value=9.3e-10  Score=73.23  Aligned_cols=76  Identities=9%  Similarity=0.093  Sum_probs=59.0

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.||+|.+... .+....+.+.+|+.+|..+ +||||+++++++...      +.+|+++||+.++|.+
T Consensus        44 ~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~  122 (367)
T 2fst_X           44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN  122 (367)
T ss_dssp             CEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC-
T ss_pred             EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHH
Confidence            5788888999999999999754 3344567888999999884 899999999998764      5689999999668877


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       123 ~~~~  126 (367)
T 2fst_X          123 IVKC  126 (367)
T ss_dssp             ----
T ss_pred             HHhc
Confidence            7653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.94  E-value=7.4e-10  Score=72.76  Aligned_cols=74  Identities=12%  Similarity=0.142  Sum_probs=60.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.||+|.+.... .....+.+.+|+.++.. ++||||+++++++...+      .+|++|||++++|.+
T Consensus        39 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  117 (353)
T 3coi_A           39 SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQK  117 (353)
T ss_dssp             EEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGG
T ss_pred             EEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHh-cCCCCcccHhheEecccccccceeEEEEeccccCCHHH
Confidence            47888888999999999997543 34456778899999988 48999999999998765      359999999986655


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      ++
T Consensus       118 ~~  119 (353)
T 3coi_A          118 IM  119 (353)
T ss_dssp             TT
T ss_pred             Hh
Confidence            44

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.93  E-value=1e-08  Score=66.46  Aligned_cols=71  Identities=10%  Similarity=0.089  Sum_probs=53.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhc-CCCCceeeEEeEEEEC----CEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRS-SDCAHTVQFYGAMFRE----GDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~-~~hpniv~~~~~~~~~----~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++..  +|..+|+|++....    ......|.+++... .+||||+++++++...    +.+|++|||+++ +|.++
T Consensus        52 ~V~~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  125 (337)
T 3mdy_A           52 EVWMGKW--RGEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDY  125 (337)
T ss_dssp             EEEEEEE--TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHH
T ss_pred             EEEEEEE--CCceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHH
Confidence            3555544  58999999996431    23344566665442 3999999999999987    789999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       126 l~~  128 (337)
T 3mdy_A          126 LKS  128 (337)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            865

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.93  E-value=9.3e-10  Score=73.42  Aligned_cols=76  Identities=16%  Similarity=0.113  Sum_probs=59.4

Q ss_pred             cceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+.+....++   ..+|+|.+....+....+.+.+|+.++.. +.||||+++++++.. ++..+++|||+++ +|.+++
T Consensus       104 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  182 (373)
T 3c1x_A          104 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI  182 (373)
T ss_dssp             EEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTT-CCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHH
T ss_pred             EEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHH
Confidence            35556554333   35899998765555567889999999877 599999999998755 5688999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      +.
T Consensus       183 ~~  184 (373)
T 3c1x_A          183 RN  184 (373)
T ss_dssp             HC
T ss_pred             hh
Confidence            64

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.92  E-value=1.8e-09  Score=70.91  Aligned_cols=74  Identities=15%  Similarity=0.141  Sum_probs=56.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC----------HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEec
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN----------TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICME   75 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~----------~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E   75 (89)
                      .|+++.+. +|..+|+|.+.....          ....+.+.+|+.+|..+ +||||+++++++...     ..+|++||
T Consensus        37 ~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e  114 (362)
T 3pg1_A           37 AVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTE  114 (362)
T ss_dssp             EEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTTCCEEEEEEE
T ss_pred             EEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCCcceEEEEEc
Confidence            35666654 489999999965321          22347889999999884 999999999998653     37999999


Q ss_pred             chhccHHHHHh
Q psy13291         76 VMDTSLDKFYT   86 (89)
Q Consensus        76 ~~~~sL~~~l~   86 (89)
                      |++|+|.+++.
T Consensus       115 ~~~~~l~~~~~  125 (362)
T 3pg1_A          115 LMRTDLAQVIH  125 (362)
T ss_dssp             CCSEEHHHHHH
T ss_pred             cCCCCHHHHHH
Confidence            99996655554

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.92  E-value=8.3e-09  Score=65.92  Aligned_cols=70  Identities=9%  Similarity=0.103  Sum_probs=52.6

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhc-CCCCceeeEEeEEEEC----CEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRS-SDCAHTVQFYGAMFRE----GDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~-~~hpniv~~~~~~~~~----~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+++..  +|+.+|+|++...    ....+..|.+++... .+||||+++++++...    +.+|++|||+++ +|.+++
T Consensus        24 V~~~~~--~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l   97 (301)
T 3q4u_A           24 VWRGSW--QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL   97 (301)
T ss_dssp             EEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHH
T ss_pred             EEEEEE--CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHH
Confidence            455544  7899999998643    234455677776553 5999999999987652    469999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      +.
T Consensus        98 ~~   99 (301)
T 3q4u_A           98 QL   99 (301)
T ss_dssp             TT
T ss_pred             hh
Confidence            64

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.92  E-value=2.6e-09  Score=67.84  Aligned_cols=71  Identities=20%  Similarity=0.248  Sum_probs=55.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+++..  +|..+|+|.+....   ..+.+.+|+.++.. ++||||+++++++... +.++++|||+++ +|.+++..
T Consensus        36 ~V~~~~~--~~~~vavK~~~~~~---~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  108 (278)
T 1byg_A           36 DVMLGDY--RGNKVAVKCIKNDA---TAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS  108 (278)
T ss_dssp             EEEEEEE--TTEEEEEEECCCCC-----HHHHHTHHHHTT-CCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHH
T ss_pred             eEEEEEE--cCCEEEEEEecchh---HHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHh
Confidence            3555544  58899999987432   35678899999887 5999999999987654 479999999999 99998864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.92  E-value=1.7e-09  Score=69.91  Aligned_cols=77  Identities=12%  Similarity=0.083  Sum_probs=56.5

Q ss_pred             cceeEEEc-cCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhc--CCCCceeeEEeEEE-----ECCEEEEEecchhccH
Q psy13291         11 KPELGLAR-LDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRS--SDCAHTVQFYGAMF-----REGDVWICMEVMDTSL   81 (89)
Q Consensus        11 ~~~l~~~~-~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~-----~~~~~~iv~E~~~~sL   81 (89)
                      .|++|.+. .+|+.+|+|.+..... ......+.+|+.++..+  ..||||+++++++.     ..+.++++|||++++|
T Consensus        26 ~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L  105 (326)
T 1blx_A           26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDL  105 (326)
T ss_dssp             EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBH
T ss_pred             EEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCH
Confidence            47778775 6788999999975322 11123455677776553  28999999999987     3468999999999988


Q ss_pred             HHHHhh
Q psy13291         82 DKFYTK   87 (89)
Q Consensus        82 ~~~l~~   87 (89)
                      .+++..
T Consensus       106 ~~~l~~  111 (326)
T 1blx_A          106 TTYLDK  111 (326)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.91  E-value=4e-09  Score=69.62  Aligned_cols=73  Identities=8%  Similarity=-0.099  Sum_probs=55.3

Q ss_pred             cceeE-----EEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC--CCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELG-----LARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS--DCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~-----~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~--~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|     ....+++.+|+|.+....    ...+..|..++..+.  .|||++.+++++..++..|++||||++ +|.
T Consensus        80 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~  155 (365)
T 3e7e_A           80 QVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLL  155 (365)
T ss_dssp             EEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHH
T ss_pred             EEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHH
Confidence            46677     356789999999997432    334566777766532  389999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       156 ~~l~~  160 (365)
T 3e7e_A          156 NAINL  160 (365)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99863

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.91  E-value=1e-08  Score=68.20  Aligned_cols=75  Identities=7%  Similarity=0.017  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCC-----ceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCA-----HTVQFYGAMFREGDVWICMEVMDTSLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hp-----niv~~~~~~~~~~~~~iv~E~~~~sL~~~l   85 (89)
                      .|++|....+|+.||+|++...  ......+..|+.++..+.+|+     +++++++.+...+.++++|||++++|.+++
T Consensus        69 ~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l  146 (382)
T 2vx3_A           69 QVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLL  146 (382)
T ss_dssp             EEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCCBHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCCCHHHHH
Confidence            5788888899999999999632  344566778888887654565     499999999999999999999988888877


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       147 ~~  148 (382)
T 2vx3_A          147 RN  148 (382)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.90  E-value=3.3e-09  Score=70.04  Aligned_cols=74  Identities=9%  Similarity=0.008  Sum_probs=58.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC-------CCCceeeEEeEEEE----CCEEEEEecchhc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS-------DCAHTVQFYGAMFR----EGDVWICMEVMDT   79 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~-------~hpniv~~~~~~~~----~~~~~iv~E~~~~   79 (89)
                      .|++|.+..+|+.||+|++...  ....+.+.+|+.+|..+.       +||||+++++++..    ...+|++|||+.+
T Consensus        52 ~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  129 (397)
T 1wak_A           52 TVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH  129 (397)
T ss_dssp             EEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCC
T ss_pred             eEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCc
Confidence            5788888899999999999632  444677889999988753       28899999999983    4589999999988


Q ss_pred             -cHHHHHh
Q psy13291         80 -SLDKFYT   86 (89)
Q Consensus        80 -sL~~~l~   86 (89)
                       +++.+++
T Consensus       130 ~l~~~~~~  137 (397)
T 1wak_A          130 HLLKWIIK  137 (397)
T ss_dssp             BHHHHHHH
T ss_pred             cHHHHHHh
Confidence             5555544

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.90  E-value=2.1e-09  Score=69.51  Aligned_cols=68  Identities=21%  Similarity=0.198  Sum_probs=54.5

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++..  .+..+|+|.+...   ...+.+.+|+.+|..+ +||||+++++++.  +..+++|||+++ +|.+++..
T Consensus        24 V~~~~~--~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~   92 (307)
T 2eva_A           24 VCKAKW--RAKDVAIKQIESE---SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG   92 (307)
T ss_dssp             EEEEEE--TTEEEEEEECSST---THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHC
T ss_pred             EEEEEE--CCeeEEEEEecCh---hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhc
Confidence            455543  5788999998632   3466788999999884 9999999999876  458999999999 99999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.87  E-value=1.6e-08  Score=66.32  Aligned_cols=75  Identities=13%  Similarity=0.015  Sum_probs=58.4

Q ss_pred             cceeEEEcc---CCCEEEEEEEeecCCHHH----------HHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEE
Q psy13291         11 KPELGLARL---DPDSEWSFRITFTVNTQE----------HKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWIC   73 (89)
Q Consensus        11 ~~~l~~~~~---~~~~~AvK~i~~~~~~~~----------~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv   73 (89)
                      .|++|....   ++..+|+|.+........          ...+.+|+..+.. .+||||+++++++..    .+.+|++
T Consensus        52 ~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~-l~h~ni~~~~~~~~~~~~~~~~~~lv  130 (345)
T 2v62_A           52 LIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ-LDYLGIPLFYGSGLTEFKGRSYRFMV  130 (345)
T ss_dssp             CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHT-CSCCCCCCEEEEEEEESSSCEEEEEE
T ss_pred             EEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcc-ccccCcceeecccccccCCCcEEEEE
Confidence            578888876   788999999976433211          1235677788766 599999999999988    6789999


Q ss_pred             ecchhc-cHHHHHhh
Q psy13291         74 MEVMDT-SLDKFYTK   87 (89)
Q Consensus        74 ~E~~~~-sL~~~l~~   87 (89)
                      |||+ + +|.+++..
T Consensus       131 ~e~~-~~~L~~~l~~  144 (345)
T 2v62_A          131 MERL-GIDLQKISGQ  144 (345)
T ss_dssp             EECE-EEEHHHHCBG
T ss_pred             Eecc-CCCHHHHHHh
Confidence            9999 7 99998864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.86  E-value=5.1e-09  Score=68.40  Aligned_cols=75  Identities=13%  Similarity=0.147  Sum_probs=58.4

Q ss_pred             cceeEEEccCCCEE----EEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSE----WSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~----AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|..+    |+|.+.........+.+.+|+.++.. ++||||+++++++..++ .++++||+++ +|.+++
T Consensus        30 ~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l  107 (327)
T 3lzb_A           30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV  107 (327)
T ss_dssp             EEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTT-CCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHH
T ss_pred             EEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHh-CCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHH
Confidence            47788888888765    66666543333446778899999887 59999999999988765 7888899999 999888


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       108 ~~  109 (327)
T 3lzb_A          108 RE  109 (327)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.86  E-value=9.8e-10  Score=71.53  Aligned_cols=75  Identities=15%  Similarity=0.053  Sum_probs=56.9

Q ss_pred             cceeEEEccCCCE----EEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDS----EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~----~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|..    +|+|.+.........+.+.+|+.++.. ++||||+++++++. .+..+++|||+++ +|.+++
T Consensus        28 ~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l  105 (325)
T 3kex_A           28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS-LDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHV  105 (325)
T ss_dssp             EEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHT-CCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHH
T ss_pred             eEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHH
Confidence            5788888888876    677776543322234456778889877 59999999999875 5678999999999 998887


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       106 ~~  107 (325)
T 3kex_A          106 RQ  107 (325)
T ss_dssp             HS
T ss_pred             HH
Confidence            64

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.86  E-value=1.5e-09  Score=69.97  Aligned_cols=77  Identities=8%  Similarity=-0.013  Sum_probs=55.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----HHHHHHHHHHHHHHhcC---CCCceeeEEeEEEECCEEEEEecc-hhc-c
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----QEHKRLLTDLDICMRSS---DCAHTVQFYGAMFREGDVWICMEV-MDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----~~~~~~~~E~~il~~~~---~hpniv~~~~~~~~~~~~~iv~E~-~~~-s   80 (89)
                      .|++|.+..+|+.+|+|.+......     .....+..|+.++..+.   +||||+++++++...+..+++||| +.+ +
T Consensus        46 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~  125 (312)
T 2iwi_A           46 TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQD  125 (312)
T ss_dssp             EEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEE
T ss_pred             EEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCC
Confidence            4778888889999999999753211     12334567888877632   899999999999999999999999 788 9


Q ss_pred             HHHHHhh
Q psy13291         81 LDKFYTK   87 (89)
Q Consensus        81 L~~~l~~   87 (89)
                      |.+++..
T Consensus       126 L~~~l~~  132 (312)
T 2iwi_A          126 LFDYITE  132 (312)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.84  E-value=1.2e-08  Score=64.87  Aligned_cols=75  Identities=13%  Similarity=0.105  Sum_probs=55.0

Q ss_pred             cceeEEEcc-CCC--EEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARL-DPD--SEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~-~~~--~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|+++.... ++.  .+|+|.+....  .....+.+.+|+.++..+ +||||+++++++..++ .+++|||+++ +|.++
T Consensus        33 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~  110 (291)
T 1u46_A           33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDR  110 (291)
T ss_dssp             CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEECCTTCBHHHH
T ss_pred             eEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEecccCCCHHHH
Confidence            466776443 333  58999987532  234567889999999885 9999999999987665 8899999999 99988


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       111 l~~  113 (291)
T 1u46_A          111 LRK  113 (291)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.83  E-value=8.4e-09  Score=69.64  Aligned_cols=70  Identities=6%  Similarity=-0.054  Sum_probs=53.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC----C--EEEEEecchhccHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE----G--DVWICMEVMDTSLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~----~--~~~iv~E~~~~sL~~~   84 (89)
                      .|++|....+|+.||+|.+.....     ...+|+.+|.. +.||||+++++++...    +  .++++|||+++++.++
T Consensus        69 ~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~-l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~  142 (420)
T 1j1b_A           69 VVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRK-LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV  142 (420)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHT-CCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHH
T ss_pred             EEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHH-cCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHH
Confidence            578888889999999999975321     12358999877 5999999999988652    2  4789999999965555


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus       143 ~~  144 (420)
T 1j1b_A          143 AR  144 (420)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.83  E-value=1.3e-08  Score=65.07  Aligned_cols=65  Identities=11%  Similarity=0.097  Sum_probs=52.5

Q ss_pred             CCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         21 PDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        21 ~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +..+|+|.+.... .....+.+.+|+.+|.. ++||||+++++. ...+..+++|||+++ +|.+++..
T Consensus        46 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~  112 (289)
T 3og7_A           46 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHA  112 (289)
T ss_dssp             SSEEEEEEESCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEE-ECSSSCEEEEECCCEEEHHHHHTT
T ss_pred             cCceEEEEEeccCCCHHHHHHHHHHHHHHHh-CCCCcEEEEEee-ccCCccEEEEEecCCCcHHHHHhh
Confidence            3458999997543 44556789999999887 599999999984 456678999999999 99988853

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.78  E-value=3e-08  Score=65.41  Aligned_cols=75  Identities=9%  Similarity=0.015  Sum_probs=52.0

Q ss_pred             cceeEEEccC-----CCEEEEEEEeecCCHH--HH--------HHHHHHHHHHHhcCCCCceeeEEeEEEEC----CEEE
Q psy13291         11 KPELGLARLD-----PDSEWSFRITFTVNTQ--EH--------KRLLTDLDICMRSSDCAHTVQFYGAMFRE----GDVW   71 (89)
Q Consensus        11 ~~~l~~~~~~-----~~~~AvK~i~~~~~~~--~~--------~~~~~E~~il~~~~~hpniv~~~~~~~~~----~~~~   71 (89)
                      .|++|....+     +..+|+|.+.......  +.        .....|+..+.. +.||||+++++++...    ...|
T Consensus        50 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~~~~~~~~~~~~~~  128 (364)
T 3op5_A           50 CIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRK-LKYLGVPKYWGSGLHDKNGKSYRF  128 (364)
T ss_dssp             EEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTT-CSCCCSCCEEEEEEEEETTEEEEE
T ss_pred             EEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhh-ccCCCCCeEEeeeeeccCCcceEE
Confidence            4677766554     5789999987543211  00        112334445444 4799999999998774    4689


Q ss_pred             EEecchhc-cHHHHHhh
Q psy13291         72 ICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        72 iv~E~~~~-sL~~~l~~   87 (89)
                      |+|||| | +|.+++..
T Consensus       129 lv~e~~-g~~L~~~~~~  144 (364)
T 3op5_A          129 MIMDRF-GSDLQKIYEA  144 (364)
T ss_dssp             EEEECE-EEEHHHHHHH
T ss_pred             EEEeCC-CCCHHHHHHh
Confidence            999999 7 99999865

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.78  E-value=8.2e-09  Score=67.35  Aligned_cols=72  Identities=13%  Similarity=0.126  Sum_probs=51.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-------HHHHHHHHHHHHHHHhcC--------CCCceeeEEeEEE----------
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-------TQEHKRLLTDLDICMRSS--------DCAHTVQFYGAMF----------   65 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-------~~~~~~~~~E~~il~~~~--------~hpniv~~~~~~~----------   65 (89)
                      .|++|..  +|+.||+|++.....       ....+.+.+|+.+|..+.        .||||+++.+.+.          
T Consensus        35 ~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv  112 (336)
T 2vuw_A           35 EVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLL  112 (336)
T ss_dssp             EEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHH
T ss_pred             EEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHH
Confidence            4666665  789999999986421       223467888999887753        4777777776653          


Q ss_pred             --------------------ECCEEEEEecchhc--cHHHH
Q psy13291         66 --------------------REGDVWICMEVMDT--SLDKF   84 (89)
Q Consensus        66 --------------------~~~~~~iv~E~~~~--sL~~~   84 (89)
                                          ..+.+||+||||++  +++.+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~  153 (336)
T 2vuw_A          113 KAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQM  153 (336)
T ss_dssp             HHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGG
T ss_pred             HHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHH
Confidence                                26789999999987  45544

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.77  E-value=4.3e-08  Score=63.25  Aligned_cols=74  Identities=11%  Similarity=0.082  Sum_probs=58.0

Q ss_pred             cceeEEE-ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCC------ceeeEEeEEEECCEEEEEecchhccHHH
Q psy13291         11 KPELGLA-RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCA------HTVQFYGAMFREGDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~-~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hp------niv~~~~~~~~~~~~~iv~E~~~~sL~~   83 (89)
                      .|++|.. ..+|+.+|+|++...  ....+.+.+|+.++..+ .|+      +++++++.+...+.++++|||+.++|.+
T Consensus        29 ~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~l~~  105 (339)
T 1z57_A           29 KVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD  105 (339)
T ss_dssp             EEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEECCCCBHHH
T ss_pred             EEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEcCCCCCHHH
Confidence            4677776 458899999999642  34466788899888764 444      5999999999999999999999558888


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       106 ~l~~  109 (339)
T 1z57_A          106 FIKE  109 (339)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.77  E-value=1.1e-08  Score=67.16  Aligned_cols=69  Identities=10%  Similarity=-0.021  Sum_probs=53.3

Q ss_pred             cceeEEEcc--------CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceee---------------EEeEEEE-
Q psy13291         11 KPELGLARL--------DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQ---------------FYGAMFR-   66 (89)
Q Consensus        11 ~~~l~~~~~--------~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~---------------~~~~~~~-   66 (89)
                      .|++|....        .++.+|+|.+...      +.+.+|+.++..+ .||||++               +++++.. 
T Consensus        57 ~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~~~~~~~~~  129 (352)
T 2jii_A           57 ILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQ  129 (352)
T ss_dssp             EEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCCCCEEEEET
T ss_pred             EEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHh-cccchhhhhhhhccCCccCccchhhccccC
Confidence            467777776        4889999999743      3567899998884 8999887               6677776 


Q ss_pred             CCEEEEEecchhc-cHHHHHhh
Q psy13291         67 EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        67 ~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .+.+|++|||+ + +|.+++..
T Consensus       130 ~~~~~lv~e~~-~~~L~~~l~~  150 (352)
T 2jii_A          130 DKYRFLVLPSL-GRSLQSALDV  150 (352)
T ss_dssp             TTEEEEEEECC-CEEHHHHHHH
T ss_pred             CcEEEEEecCC-CcCHHHHHHh
Confidence            67999999999 7 99999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.75  E-value=8.8e-08  Score=60.98  Aligned_cols=73  Identities=12%  Similarity=0.026  Sum_probs=55.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceee-EEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQ-FYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~-~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++.+..+|+.+|+|.+.....   .+.+.+|+.++..+ .|++++. +..++...+..+++|||+.++|.+++..
T Consensus        24 ~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~   97 (296)
T 3uzp_A           24 DIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF   97 (296)
T ss_dssp             EEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEecCCCHHHHHHh
Confidence            578888889999999999875432   23477899998885 5655554 4455567789999999993399999863

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.72  E-value=3.8e-08  Score=64.59  Aligned_cols=75  Identities=12%  Similarity=0.114  Sum_probs=59.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC----------CCCceeeEEeEEEECC----EEEEEecc
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS----------DCAHTVQFYGAMFREG----DVWICMEV   76 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~----------~hpniv~~~~~~~~~~----~~~iv~E~   76 (89)
                      .|++|.+..+|+.+|+|++..  +....+.+.+|+.++..+.          +||||+++++.+...+    .++++|||
T Consensus        34 ~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~  111 (373)
T 1q8y_A           34 TVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEV  111 (373)
T ss_dssp             EEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECC
T ss_pred             EEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEec
Confidence            578888889999999999963  3334566788888887642          2899999999998754    89999999


Q ss_pred             hhccHHHHHhh
Q psy13291         77 MDTSLDKFYTK   87 (89)
Q Consensus        77 ~~~sL~~~l~~   87 (89)
                      +.++|.+++..
T Consensus       112 ~~~~L~~~~~~  122 (373)
T 1q8y_A          112 LGENLLALIKK  122 (373)
T ss_dssp             CCEEHHHHHHH
T ss_pred             CCCCHHHHHHH
Confidence            94499888865

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.71  E-value=9.5e-09  Score=66.79  Aligned_cols=77  Identities=12%  Similarity=0.056  Sum_probs=60.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----HHHHHHHHHHHHHHhcC-CCCceeeEEeEEEECCEEEEEecchhc--cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----QEHKRLLTDLDICMRSS-DCAHTVQFYGAMFREGDVWICMEVMDT--SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----~~~~~~~~E~~il~~~~-~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~   82 (89)
                      .|++|....+|+.||+|.+......     ...+.+..|+.++..+. +||||+++++.+..++..+++||++.+  +|.
T Consensus        58 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~  137 (320)
T 3a99_A           58 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF  137 (320)
T ss_dssp             EEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHH
T ss_pred             EEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHH
Confidence            5788888889999999999753211     11244667888888754 479999999999999999999999974  888


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      +++..
T Consensus       138 ~~l~~  142 (320)
T 3a99_A          138 DFITE  142 (320)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            88764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.69  E-value=7.7e-08  Score=61.18  Aligned_cols=73  Identities=12%  Similarity=0.026  Sum_probs=53.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceee-EEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQ-FYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~-~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.+|+|.+.....   .+.+..|+.++..+ .|++++. +..++...+..+++|||+.++|.+++..
T Consensus        24 ~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~   97 (296)
T 4hgt_A           24 DIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF   97 (296)
T ss_dssp             EEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEccCCCHHHHHHH
Confidence            578888889999999998764321   23467789998885 5555555 5555577889999999993399998864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.67  E-value=1.7e-07  Score=64.65  Aligned_cols=74  Identities=12%  Similarity=0.025  Sum_probs=58.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|+++.+..+|..||||++.....   ...+..|+.++..+.+|+++..+..++...+..+|+|||+.++|.+++..
T Consensus        22 ~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g~sL~~ll~~   95 (483)
T 3sv0_A           22 EIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF   95 (483)
T ss_dssp             EEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCCCCHHHHHHh
Confidence            578898889999999998875422   23467899998886566777777777788899999999993399999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.67  E-value=2.1e-07  Score=60.37  Aligned_cols=71  Identities=17%  Similarity=0.166  Sum_probs=49.9

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHh-cCCCCceeeEEeEEEE-----CCEEEEEecchhc-cHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMR-SSDCAHTVQFYGAMFR-----EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~-~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~-sL~~~   84 (89)
                      |+++  ..+|+.+|+|++....    .+.+..|.+++.. ...||||+++++.+..     ...++++||||++ +|.++
T Consensus        29 Vy~~--~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  102 (336)
T 3g2f_A           29 VYKG--SLDERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKY  102 (336)
T ss_dssp             EEEE--EETTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHH
T ss_pred             EEEE--EECCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHH
Confidence            5555  3478999999997432    2333444444322 3599999999986654     2368999999999 99999


Q ss_pred             Hhhc
Q psy13291         85 YTKV   88 (89)
Q Consensus        85 l~~~   88 (89)
                      ++..
T Consensus       103 l~~~  106 (336)
T 3g2f_A          103 LSLH  106 (336)
T ss_dssp             HHHC
T ss_pred             Hhhc
Confidence            8653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.63  E-value=2.8e-09  Score=68.74  Aligned_cols=72  Identities=14%  Similarity=0.062  Sum_probs=55.6

Q ss_pred             ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |+++...   ..+|+|.+.... .....+.+.+|+.++.. ++||||+++++++..++.++++|||+++ +|.+++..
T Consensus        49 V~~~~~~---~~~avk~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~  122 (319)
T 2y4i_B           49 VYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQ-TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD  122 (319)
T ss_dssp             EEEEEES---SSEEEEECCCCSCCCCCCCCCCTTGGGGTT-CCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTS
T ss_pred             EEEEEEc---CeEEEEEeecCCCCHHHHHHHHHHHHHHhc-CCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHh
Confidence            5555543   348999987532 22223456678888777 5999999999999999999999999999 99999865

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.60  E-value=2.9e-07  Score=59.74  Aligned_cols=72  Identities=11%  Similarity=0.017  Sum_probs=55.3

Q ss_pred             cceeEEEccCC-CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCc------eeeEEeEEEECCEEEEEecchhccHHH
Q psy13291         11 KPELGLARLDP-DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAH------TVQFYGAMFREGDVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~-~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpn------iv~~~~~~~~~~~~~iv~E~~~~sL~~   83 (89)
                      .|++|....++ ..+|+|++...  ....+.+..|+.++..+ .|++      ++.+++.+...+.++++|||+++++.+
T Consensus        34 ~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  110 (355)
T 2eu9_A           34 KVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFE  110 (355)
T ss_dssp             EEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEECCCCBHHH
T ss_pred             EEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEeccCCChHH
Confidence            47778877777 68999999642  34456778899888774 5554      899999999999999999999774444


Q ss_pred             HH
Q psy13291         84 FY   85 (89)
Q Consensus        84 ~l   85 (89)
                      ++
T Consensus       111 ~l  112 (355)
T 2eu9_A          111 FL  112 (355)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.59  E-value=1.1e-07  Score=63.66  Aligned_cols=64  Identities=8%  Similarity=-0.014  Sum_probs=47.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL   81 (89)
                      .|++|....++. +|+|.+......     ..+|+.+|.. +.||||+++++++...+      .++++|||+++++
T Consensus        55 ~V~~a~~~~~~~-~aikk~~~~~~~-----~~~E~~il~~-l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l  124 (394)
T 4e7w_A           55 VVFQAKLVESDE-VAIKKVLQDKRF-----KNRELQIMRI-VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETV  124 (394)
T ss_dssp             EEEEEEETTTEE-EEEEEEECCTTS-----CCHHHHHHHT-CCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEH
T ss_pred             EEEEEEECCCCe-EEEEEEecCcch-----HHHHHHHHHh-CCCCCcceEEEEEEecCCCCCceEEEEEeeccCccH
Confidence            467777766666 788888643211     1258889877 59999999999997643      3899999999943

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.57  E-value=8.6e-08  Score=66.91  Aligned_cols=69  Identities=6%  Similarity=-0.185  Sum_probs=52.6

Q ss_pred             ccCCCEEEEEEEeecC--CH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         18 RLDPDSEWSFRITFTV--NT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~--~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      ...+..+|+|......  ..     ...+.+.+|+.+|..+ +||||+.+..++...+..||+||||+| +|.+++..
T Consensus       356 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~  432 (540)
T 3en9_A          356 SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED  432 (540)
T ss_dssp             ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT
T ss_pred             EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH
Confidence            4577889999875421  11     1245689999999885 999999666666677788999999998 99998753

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.21  E-value=1.7e-06  Score=55.82  Aligned_cols=67  Identities=6%  Similarity=-0.137  Sum_probs=47.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH-----------------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEE
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT-----------------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWIC   73 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~-----------------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv   73 (89)
                      .|++|.. .+|+.+|+|.+......                 .....+.+|+.+|..+ +|   +++++.+. .+..|++
T Consensus       105 ~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~~---~~v~~~~~-~~~~~lv  178 (282)
T 1zar_A          105 AVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QG---LAVPKVYA-WEGNAVL  178 (282)
T ss_dssp             EEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TT---SSSCCEEE-EETTEEE
T ss_pred             eEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-cC---CCcCeEEe-ccceEEE
Confidence            4777877 78999999999642111                 1356788999999886 44   44444333 3556999


Q ss_pred             ecchhc-cHHH
Q psy13291         74 MEVMDT-SLDK   83 (89)
Q Consensus        74 ~E~~~~-sL~~   83 (89)
                      ||||+| +|.+
T Consensus       179 mE~~~g~~L~~  189 (282)
T 1zar_A          179 MELIDAKELYR  189 (282)
T ss_dssp             EECCCCEEGGG
T ss_pred             EEecCCCcHHH
Confidence            999999 9876

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.81  E-value=9.8e-05  Score=46.32  Aligned_cols=65  Identities=6%  Similarity=-0.103  Sum_probs=50.1

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      ..|..+++|........ ....+.+|..+|..+..+.++.++++.+...+..|++|||++| +|.+.
T Consensus        35 ~~~~~~vlK~~~~~~~~-~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           35 GENENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             CSSCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             CCCCcEEEEeCCcccCC-CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence            34788999988642111 1235778999988765677888999999899999999999999 98765

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.26  E-value=0.00044  Score=43.70  Aligned_cols=63  Identities=11%  Similarity=-0.079  Sum_probs=40.7

Q ss_pred             cceeEEEccCCCE--EEEEEEeecCCH-----------------------HHHHHHHHHHHHHHhcCCCCce--eeEEeE
Q psy13291         11 KPELGLARLDPDS--EWSFRITFTVNT-----------------------QEHKRLLTDLDICMRSSDCAHT--VQFYGA   63 (89)
Q Consensus        11 ~~~l~~~~~~~~~--~AvK~i~~~~~~-----------------------~~~~~~~~E~~il~~~~~hpni--v~~~~~   63 (89)
                      .|++|....+|+.  +|+|++......                       .....+.+|+.+|..+ .|+++  +..++.
T Consensus        62 ~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~  140 (258)
T 1zth_A           62 NVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEAGVSVPQPYTY  140 (258)
T ss_dssp             EEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHTTCCCCCEEEE
T ss_pred             EEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhCCCCCCeEEEc
Confidence            4677777678988  999987532111                       1123578899998874 56643  333332


Q ss_pred             EEECCEEEEEecchh
Q psy13291         64 MFREGDVWICMEVMD   78 (89)
Q Consensus        64 ~~~~~~~~iv~E~~~   78 (89)
                          +..+|+|||++
T Consensus       141 ----~~~~lVmE~~g  151 (258)
T 1zth_A          141 ----MKNVLLMEFIG  151 (258)
T ss_dssp             ----ETTEEEEECCE
T ss_pred             ----CCCEEEEEecC
Confidence                35689999995

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.25  E-value=0.00087  Score=44.99  Aligned_cols=75  Identities=9%  Similarity=-0.065  Sum_probs=46.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCC-Cce---------------------eeEEeEEEE
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDC-AHT---------------------VQFYGAMFR   66 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~h-pni---------------------v~~~~~~~~   66 (89)
                      .|++|.+..+|+.||||++......  ...+.+.+|+.++.. +.| +|.                     ..+...+..
T Consensus        93 ~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (413)
T 3dzo_A           93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRL-LRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLD  171 (413)
T ss_dssp             EEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGG-STTCCSHHHHHHHTCBCCCCEEEECCC----------
T ss_pred             EEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHh-hccCCCHHHHHHhcccccchhhcccCCCCccccccCC
Confidence            4788888999999999998743222  235678889988765 455 211                     111111111


Q ss_pred             -----CCEEEEEecchhccHHHHHh
Q psy13291         67 -----EGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        67 -----~~~~~iv~E~~~~sL~~~l~   86 (89)
                           ...++++|+++.++|.++++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~L~~ll~  196 (413)
T 3dzo_A          172 ERDMWVLSRFFLYPRMQSNLQTFGE  196 (413)
T ss_dssp             -----CCSEEEEEECCSEEHHHHHH
T ss_pred             CccccccceEEEeehhcCCHHHHHH
Confidence                 23578888888778888874

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.04  E-value=0.01  Score=37.04  Aligned_cols=64  Identities=3%  Similarity=-0.063  Sum_probs=47.4

Q ss_pred             ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      ...+..+.+|.-+.    .....+..|...|..+..+-.+.+.++.+..++..|++||+++| ++.+..
T Consensus        47 ~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           47 KPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             CTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred             cCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence            34456678887652    23456778998887654554577888888899999999999999 887654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.86  E-value=0.0015  Score=40.36  Aligned_cols=60  Identities=7%  Similarity=-0.025  Sum_probs=42.9

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCc-eeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAH-TVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpn-iv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .+|..+++|.....    ....+..|..++..+..++- +.++++....++..|++|||++| ++.
T Consensus        42 ~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           42 QGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             TTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            35677899987533    12346678888776544432 56688888877889999999999 874

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.13  E-value=0.00056  Score=46.50  Aligned_cols=19  Identities=0%  Similarity=-0.363  Sum_probs=14.6

Q ss_pred             cceeEEEccCCCEEEEEEEe
Q psy13291         11 KPELGLARLDPDSEWSFRIT   30 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~   30 (89)
                      .|++|.+ .+|+.+|||++.
T Consensus       110 ~VY~a~d-~~G~~vAvKi~r  128 (397)
T 4gyi_A          110 DIMIVAD-EKGKQKVLKIHR  128 (397)
T ss_dssp             EEEEEEC-TTCCEEEEEEEC
T ss_pred             EEEEEEC-CCCCEEEEEEEe
Confidence            3677765 479999999875

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=94.77  E-value=0.033  Score=36.33  Aligned_cols=61  Identities=10%  Similarity=0.026  Sum_probs=38.5

Q ss_pred             CCEEEEEEEe--ecCCHHHHHHHHHHHHHHHhcCC-CCceeeEEeEEEEC---CEEEEEecchhc-cH
Q psy13291         21 PDSEWSFRIT--FTVNTQEHKRLLTDLDICMRSSD-CAHTVQFYGAMFRE---GDVWICMEVMDT-SL   81 (89)
Q Consensus        21 ~~~~AvK~i~--~~~~~~~~~~~~~E~~il~~~~~-hpniv~~~~~~~~~---~~~~iv~E~~~~-sL   81 (89)
                      +..+++|...  ..........+.+|..++..+.. +.++++.++.+...   +..|++|||++| ++
T Consensus        61 ~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l  128 (359)
T 3dxp_A           61 GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVL  128 (359)
T ss_dssp             SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCC
T ss_pred             CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeec
Confidence            4567777665  22111224567789999877533 44578888877665   458999999999 66

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=92.88  E-value=0.36  Score=31.49  Aligned_cols=58  Identities=9%  Similarity=0.089  Sum_probs=41.3

Q ss_pred             CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCC--CCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291         20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSD--CAHTVQFYGAMFREGDVWICMEVMDT-SL   81 (89)
Q Consensus        20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~--hpniv~~~~~~~~~~~~~iv~E~~~~-sL   81 (89)
                      .+..+++|.-...    ....+..|.+.|..+..  ...+++.++.....+..|++|||++| ++
T Consensus        58 ~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           58 EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            4567788876532    24556778888766433  35677788777777899999999998 53

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.86  E-value=0.79  Score=29.34  Aligned_cols=60  Identities=10%  Similarity=0.046  Sum_probs=39.0

Q ss_pred             CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-C-ceeeEEeEEE-ECCEEEEEecchhc-cHHH
Q psy13291         21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-A-HTVQFYGAMF-REGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-p-niv~~~~~~~-~~~~~~iv~E~~~~-sL~~   83 (89)
                      |..+++|.-.   .......+..|..+|..+..+ + .+.+.+.... ..+..|++|||++| ++..
T Consensus        39 g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           39 NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            4556777632   233456788999998875443 2 2455555553 34568899999999 7765

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=88.21  E-value=0.46  Score=31.37  Aligned_cols=60  Identities=7%  Similarity=-0.043  Sum_probs=33.3

Q ss_pred             ccCCCEEEEEEEeecCC---H---HHHHHHHHHHHHHHhcCCC-C-ceeeEEeEEEECCEEEEEecchhc
Q psy13291         18 RLDPDSEWSFRITFTVN---T---QEHKRLLTDLDICMRSSDC-A-HTVQFYGAMFREGDVWICMEVMDT   79 (89)
Q Consensus        18 ~~~~~~~AvK~i~~~~~---~---~~~~~~~~E~~il~~~~~h-p-niv~~~~~~~~~~~~~iv~E~~~~   79 (89)
                      ..++..+++|.......   .   ...+.+..|..+|..+..+ | .+..++..  .++..+++||+++|
T Consensus        52 ~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g  119 (397)
T 2olc_A           52 QEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSH  119 (397)
T ss_dssp             ----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTT
T ss_pred             CCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCCC
Confidence            33567899998753211   0   0123456788887764232 3 34455543  45567899999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	89
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.002

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.002
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD-TSLDKFYT 86
            +  + +  E + L+++L +     +  + V   GA    G   +  E      L  F  
Sbjct: 60  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 119

Query: 87  K 87
           +
Sbjct: 120 R 120

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.002
 Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 28  RITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMD-TSLDKF 84
            +    ++ E + L+++L +  +     + V   GA    G +++  E      L  +
Sbjct: 74  MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY 131

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	89
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.68
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.67
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.67
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.65
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.64
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.64
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.62
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.62
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.6
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.6
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.6
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.6
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.6
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.6
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.6
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.59
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.57
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.56
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.55
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.55
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.54
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.54
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.54
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.53
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.51
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.5
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.5
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.49
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.48
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.47
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.47
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.45
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.43
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.43
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.42
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.4
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.4
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.39
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.39
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.38
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.38
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.37
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.37
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.35
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.34
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.33
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.31
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.29
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.29
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.25
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.24
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.24
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.23
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.22
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.21
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.2
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.18
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.17
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.12
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.03
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.1
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.27
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.22
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.78

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=8.8e-17  Score=103.90  Aligned_cols=76  Identities=8%  Similarity=0.030  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|++...........+.+|+.+|.. ++||||+++++++..++.+||+||||+| +|.+++..
T Consensus        24 ~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~  100 (307)
T d1a06a_          24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK-IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE  100 (307)
T ss_dssp             GEEEEEETTTCCEEEEEEEEC----------CHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT
T ss_pred             EEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhc
Confidence            5899999999999999999865433345668899999887 5999999999999999999999999999 99998865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=8.9e-17  Score=104.23  Aligned_cols=76  Identities=24%  Similarity=0.353  Sum_probs=68.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|.+....+....+.+.+|+.+|.. ++||||++++++|..++.+|||||||+| +|.+++.+
T Consensus        21 ~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~   97 (322)
T d1s9ja_          21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK   97 (322)
T ss_dssp             CEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGG-CCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhh
Confidence            5889999999999999999866555556788999999887 5999999999999999999999999999 99999865

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.9e-17  Score=103.22  Aligned_cols=76  Identities=12%  Similarity=0.127  Sum_probs=63.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|+++.....+..+.+.+|+.+|.+ ++||||+++++++..++.+||+||||+| +|.++++.
T Consensus        20 ~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~   96 (271)
T d1nvra_          20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP   96 (271)
T ss_dssp             EEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT
T ss_pred             EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHh-CCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhc
Confidence            5889999999999999999865444445678999999887 5999999999999999999999999999 99888754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=4.8e-16  Score=99.49  Aligned_cols=76  Identities=9%  Similarity=0.014  Sum_probs=65.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.++.+|+.||+|++.....     ....+.+.+|+.+|.. ++||||+++++++..++.+||+||||+| +|.++
T Consensus        25 ~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~  103 (293)
T d1jksa_          25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE-IQHPNVITLHEVYENKTDVILILELVAGGELFDF  103 (293)
T ss_dssp             EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcCCCccccch
Confidence            588999999999999999975321     1235778999999988 4999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       104 i~~  106 (293)
T d1jksa_         104 LAE  106 (293)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            865

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6.6e-16  Score=99.29  Aligned_cols=75  Identities=9%  Similarity=0.213  Sum_probs=65.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|++...... ..+.+.+|+.+|.. ++||||+++++++..++.+||+||||+| +|.+++.+
T Consensus        35 ~Vy~a~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~  110 (293)
T d1yhwa1          35 TVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  110 (293)
T ss_dssp             EEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEecccCh-HHHHHHHHHHHHHh-CCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc
Confidence            5889999999999999999754322 25678999999888 5999999999999999999999999999 99998865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.8e-16  Score=99.26  Aligned_cols=75  Identities=17%  Similarity=0.258  Sum_probs=65.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|..+|+|+++.... ...+.+.+|+.+|.+ ++||||+++++++..++.+|++||||+| +|.+++.+
T Consensus        27 ~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~  102 (288)
T d2jfla1          27 KVYKAQNKETSVLAAAKVIDTKSE-EELEDYMVEIDILAS-CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE  102 (288)
T ss_dssp             EEEEEEETTTCCEEEEEEEECSSS-GGGGGTHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEECcCCH-HHHHHHHHHHHHHHh-CCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHh
Confidence            588999999999999999975432 346678899999988 5999999999999999999999999999 99998754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=9.7e-16  Score=97.33  Aligned_cols=76  Identities=14%  Similarity=0.240  Sum_probs=64.1

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.++.+|+.||+|.+... .++...+.+.+|+.+|.+ ++||||+++++++..  ++.+||+||||+| +|.+++.
T Consensus        19 ~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~   97 (269)
T d2java1          19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT   97 (269)
T ss_dssp             EEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTS-CCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHH-CCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHH
Confidence            5889999999999999999764 345567788999999877 599999999999965  4579999999999 9999986


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      +
T Consensus        98 ~   98 (269)
T d2java1          98 K   98 (269)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.5e-15  Score=98.57  Aligned_cols=74  Identities=3%  Similarity=-0.029  Sum_probs=64.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|.++...  .....+.+|+.+|.. ++||||++++++|..++.+||+||||+| +|.++++.
T Consensus        20 ~Vy~~~~~~~~~~~AiK~i~~~~--~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~   94 (321)
T d1tkia_          20 IVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNI-ARHRNILHLHESFESMEELVMIFEFISGLDIFERINT   94 (321)
T ss_dssp             EEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHH-SCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS
T ss_pred             EEEEEEECCCCcEEEEEEEcCCc--ccHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHh
Confidence            47899999999999999997543  234568899999988 5999999999999999999999999999 99998864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.60  E-value=3.4e-15  Score=95.16  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=65.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH--------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT--------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SL   81 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~--------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL   81 (89)
                      .|++|.+..+|+.+|+|+++.....        ...+.+++|+.+|.++..||||+++++++..++.+||+||||+| ||
T Consensus        18 ~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L   97 (277)
T d1phka_          18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL   97 (277)
T ss_dssp             EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchH
Confidence            5889999999999999999764211        12356889999999865699999999999999999999999999 99


Q ss_pred             HHHHhh
Q psy13291         82 DKFYTK   87 (89)
Q Consensus        82 ~~~l~~   87 (89)
                      .++|+.
T Consensus        98 ~~~l~~  103 (277)
T d1phka_          98 FDYLTE  103 (277)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.3e-16  Score=97.19  Aligned_cols=76  Identities=11%  Similarity=0.069  Sum_probs=65.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|++....  +....+.+.+|+.+|.. ++||||+++++++..++.+||+||||+| +|.+++.+
T Consensus        21 ~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~   99 (263)
T d2j4za1          21 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH-LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK   99 (263)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHh-cCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhh
Confidence            58899999999999999997431  11235668899999887 5999999999999999999999999999 99998865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.7e-15  Score=94.71  Aligned_cols=76  Identities=13%  Similarity=0.185  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..++..||+|.+... .+....+.+.+|+.+|.+ ++||||+++++++..    ++.+||+||||++ +|.++
T Consensus        24 ~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~  102 (270)
T d1t4ha_          24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTY  102 (270)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHH
T ss_pred             EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHH
Confidence            5788999999999999999754 345567789999999887 599999999999876    3479999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +++
T Consensus       103 l~~  105 (270)
T d1t4ha_         103 LKR  105 (270)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            865

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=2.8e-15  Score=96.90  Aligned_cols=75  Identities=12%  Similarity=0.243  Sum_probs=64.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.+..+|+.||||++....  +....+.+.+|+.+|.+ ++||||+++++++..++.+||+||||++ +++.++.
T Consensus        30 ~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~  107 (309)
T d1u5ra_          30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV  107 (309)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHH-CCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHH
Confidence            58999999999999999998643  23456779999999887 5999999999999999999999999999 8876654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.9e-16  Score=98.20  Aligned_cols=76  Identities=12%  Similarity=0.075  Sum_probs=65.2

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.++.+|+.||+|++....  +....+.+.+|+.+|.. ++||||+++++++..++.+|++||||+| +|.+++..
T Consensus        23 ~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~  101 (288)
T d1uu3a_          23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR-LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK  101 (288)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-CCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHH-cCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhc
Confidence            58999999999999999997531  12235678899999988 5999999999999999999999999999 99988764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.60  E-value=4.7e-15  Score=97.25  Aligned_cols=74  Identities=8%  Similarity=-0.003  Sum_probs=65.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.++.+|+.||+|++... .....+.+.+|+.+|.++ .||||+++++++..++.+||+||||+| +|.+++.
T Consensus        41 ~Vy~~~~~~~g~~vAvK~i~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~  115 (350)
T d1koaa2          41 VVHRVTERATGNNFAAKFVMTP-HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA  115 (350)
T ss_dssp             EEEEEEETTTTEEEEEEEECCC-SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT
T ss_pred             EEEEEEECCCCCEEEEEEEccc-chhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHH
Confidence            5889999999999999999744 344567889999999884 999999999999999999999999999 9988874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.60  E-value=3.9e-15  Score=97.67  Aligned_cols=75  Identities=7%  Similarity=-0.013  Sum_probs=64.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|++.... ....+.+.+|+.+|.. ++||||++++++|..++.+||+||||+| +|.+++..
T Consensus        44 ~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~  119 (352)
T d1koba_          44 VVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQ-LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA  119 (352)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTT-CCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC
T ss_pred             EEEEEEECCCCCEEEEEEECCcc-hhHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHh
Confidence            58899999999999999997543 3345678899999887 5999999999999999999999999999 99877643

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=1.4e-15  Score=97.27  Aligned_cols=74  Identities=16%  Similarity=0.130  Sum_probs=64.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|....+|+.||+|.+.....  ..+.+.+|+.+|.+ ++||||++++|++..++.+||+||||++ +|.+++..
T Consensus        32 ~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~  106 (287)
T d1opja_          32 EVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  106 (287)
T ss_dssp             SEEEEEEGGGTEEEEEEECCTTCS--CHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEECCccc--hHHHHHHHHHHHHh-CCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhh
Confidence            588999999999999999975433  25678999999988 5999999999999999999999999999 99988864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=4.1e-15  Score=95.55  Aligned_cols=76  Identities=18%  Similarity=0.231  Sum_probs=63.5

Q ss_pred             cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|..+.+|.   .+|+|.+.........+.+.+|+.+|.+ ++||||++++|++..++.+|++||||++ +|++++.
T Consensus        41 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~  119 (299)
T d1jpaa_          41 EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR  119 (299)
T ss_dssp             EEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh-CCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeec
Confidence            478888877765   5889988766666667889999999988 4999999999999999999999999999 9999886


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       120 ~  120 (299)
T d1jpaa_         120 Q  120 (299)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.5e-14  Score=92.42  Aligned_cols=75  Identities=15%  Similarity=0.183  Sum_probs=60.4

Q ss_pred             cceeEEEccC--CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLD--PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~--~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|..+.+  +..||||.+.........+.+.+|+.+|.++ +||||++++|++.. +.+|||||||++ +|.+++..
T Consensus        24 ~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~  101 (285)
T d1u59a_          24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVG  101 (285)
T ss_dssp             EEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTT
T ss_pred             EEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhc
Confidence            4677766543  4479999998666666678899999999884 99999999998864 568999999999 99998754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=9.9e-15  Score=93.93  Aligned_cols=77  Identities=14%  Similarity=0.206  Sum_probs=62.0

Q ss_pred             cceeEEEccCCCE--EEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDS--EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~--~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|..  +|||.+.........+.+.+|+.+|.++.+||||++++|++..++.+||+||||++ +|.++|+.
T Consensus        25 ~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~  104 (309)
T d1fvra_          25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK  104 (309)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHT
T ss_pred             EEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhh
Confidence            4788888888864  67788765544445678999999998855899999999999999999999999999 99999865

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=4.6e-15  Score=96.19  Aligned_cols=77  Identities=8%  Similarity=0.022  Sum_probs=65.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|++....  .....+.+..|+.++....+||||+++++++..++.+|||||||+| +|.++++.
T Consensus        17 ~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~   96 (320)
T d1xjda_          17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS   96 (320)
T ss_dssp             EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhc
Confidence            58999999999999999997531  1223566778888877657999999999999999999999999999 99999865

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=6.5e-15  Score=95.34  Aligned_cols=76  Identities=8%  Similarity=0.082  Sum_probs=65.1

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|++....  .....+.+.+|+.+|.. ++||||+++++++..++.+|++||||+| +|..++..
T Consensus        19 ~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~   97 (316)
T d1fota_          19 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK   97 (316)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHh-ccCcChhheeeeEeeCCeeeeEeeecCCccccccccc
Confidence            58999999999999999997531  11235678899999887 5999999999999999999999999999 99888765

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=6.3e-15  Score=96.24  Aligned_cols=76  Identities=12%  Similarity=-0.014  Sum_probs=65.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      +|++|.+..+|+.||+|+++...  .....+.+.+|+.+|.. ++||||++++++|..++.+|++||||+| +|.+++.+
T Consensus        20 ~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~   98 (337)
T d1o6la_          20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR   98 (337)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHh-CCCCCEEEEEeeeccccccccceeccCCCchhhhhhc
Confidence            68999999999999999997531  12235678899999887 5999999999999999999999999999 99988875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.54  E-value=2.3e-14  Score=90.77  Aligned_cols=76  Identities=13%  Similarity=0.003  Sum_probs=64.4

Q ss_pred             cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC----EEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.+..+|+.||+|++...  .+....+.+.+|+.+|.. .+||||+++++++...+    .+||+||||+| +|.+
T Consensus        22 ~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~-~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~  100 (277)
T d1o6ya_          22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA-LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD  100 (277)
T ss_dssp             EEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHh-cCCCCCCcccceeeeccCCCceEEEEEECCCCCEehh
Confidence            5889999999999999999754  234556789999999887 59999999999998754    48999999999 9998


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       101 ~~~~  104 (277)
T d1o6ya_         101 IVHT  104 (277)
T ss_dssp             HHHH
T ss_pred             hhcc
Confidence            8754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.2e-14  Score=93.40  Aligned_cols=71  Identities=15%  Similarity=0.124  Sum_probs=60.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|+.||+|++...      ..+.+|+.++.+..+||||++++++|.+    .+.+||+||||+| +|.+++
T Consensus        27 ~Vy~a~~~~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i  100 (335)
T d2ozaa1          27 KVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI  100 (335)
T ss_dssp             EEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHH
Confidence            5899999999999999999632      3456799887776799999999999976    3579999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ++
T Consensus       101 ~~  102 (335)
T d2ozaa1         101 QD  102 (335)
T ss_dssp             HS
T ss_pred             Hh
Confidence            65

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3.8e-14  Score=90.62  Aligned_cols=73  Identities=7%  Similarity=0.111  Sum_probs=59.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..+|+.||+|++..... ....+.+.+|+.+|.+ ++||||+++++++..++.+|++||||++ +++.+
T Consensus        17 ~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~   91 (298)
T d1gz8a_          17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM   91 (298)
T ss_dssp             EEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHh-CCCCcEEEeccccccccceeEEEeecCCchhhhh
Confidence            689999999999999999965432 2235678899999887 5999999999999999999999999999 44443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.4e-14  Score=92.71  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=60.8

Q ss_pred             cceeEEEccCCC-----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPD-----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~-----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|....++.     .||+|.+....+......+.+|+.+|.++.+||||+++++++..++.+|++||||++ +|.++
T Consensus        52 ~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~  131 (325)
T d1rjba_          52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY  131 (325)
T ss_dssp             EEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHH
Confidence            366777665544     589999876544555677899999998866999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      |+.
T Consensus       132 l~~  134 (325)
T d1rjba_         132 LRS  134 (325)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.2e-14  Score=89.74  Aligned_cols=73  Identities=16%  Similarity=0.293  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|... ++..||||.+......  .+.+.+|+.++.+ ++||||++++|++..++.+|++||||++ +|.+++..
T Consensus        20 ~Vy~~~~~-~~~~vAvK~i~~~~~~--~~~~~~E~~~l~~-l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~   93 (263)
T d1sm2a_          20 LVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMK-LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT   93 (263)
T ss_dssp             CEEEEEET-TTEEEEEEECCSSSSC--HHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             EEEEEEEC-CCCEEEEEEECCCcCc--HHHHHHHHHHHHh-cCCCCcccccceeccCCceEEEEEecCCCcHHHHhhc
Confidence            46777654 5678999999754332  4578999999988 5999999999999999999999999999 99998764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.9e-14  Score=89.25  Aligned_cols=76  Identities=13%  Similarity=0.154  Sum_probs=58.4

Q ss_pred             cceeEEEcc--CCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARL--DPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~--~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|..+.  +++.||+|++.... +....+.+.+|+.+|.+ ++||||++++|++.. +..+|+||||++ +|.++++
T Consensus        22 ~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~   99 (277)
T d1xbba_          22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ-LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQ   99 (277)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHT-CCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHh-CCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHh
Confidence            467776543  55789999997543 33446789999999988 599999999998854 567899999999 9999987


Q ss_pred             hc
Q psy13291         87 KV   88 (89)
Q Consensus        87 ~~   88 (89)
                      ..
T Consensus       100 ~~  101 (277)
T d1xbba_         100 QN  101 (277)
T ss_dssp             HC
T ss_pred             hc
Confidence            53

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.1e-14  Score=90.92  Aligned_cols=75  Identities=7%  Similarity=0.031  Sum_probs=59.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCH----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNT----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.++.+|+.||+|++......    ...+.+.+|+.+|.. ++||||+++++++..++.+||+||||++ ++..++
T Consensus        13 ~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~   91 (299)
T d1ua2a_          13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE-LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIK   91 (299)
T ss_dssp             EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHH-CCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHT
T ss_pred             EEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHh-CCCCCEeEEEeeeccCCceeehhhhhcchHHhhhh
Confidence            5889999999999999999753211    123568899999988 5999999999999999999999999999 776665


Q ss_pred             h
Q psy13291         86 T   86 (89)
Q Consensus        86 ~   86 (89)
                      .
T Consensus        92 ~   92 (299)
T d1ua2a_          92 D   92 (299)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=9e-14  Score=87.64  Aligned_cols=72  Identities=17%  Similarity=0.193  Sum_probs=60.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.++ ++..||||.++.....  .+.+.+|+.++.+ ++||||++++|++..++.++++|||+++ +|.+++.
T Consensus        19 ~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~Ev~~~~~-l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~   91 (258)
T d1k2pa_          19 VVKYGKWR-GQYDVAIKMIKEGSMS--EDEFIEEAKVMMN-LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR   91 (258)
T ss_dssp             EEEEEEET-TTEEEEEEEEESSSSC--HHHHHHHHHHHHT-CCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEEC-CCCEEEEEEECcCcCC--HHHHHHHHHHHHh-cCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhh
Confidence            47788874 7778999999864332  4578899999887 5999999999999999999999999998 9888764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7.7e-14  Score=89.77  Aligned_cols=76  Identities=14%  Similarity=0.079  Sum_probs=64.1

Q ss_pred             ceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         12 PELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      |+.|..+     .++..||||++...........+.+|+.++..+.+||||++++|++..++.+|++||||++ +|.+++
T Consensus        39 Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l  118 (311)
T d1t46a_          39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL  118 (311)
T ss_dssp             EEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHH
T ss_pred             EEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHH
Confidence            5566542     4667899999987666666778999999998866899999999999999999999999999 999998


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ++
T Consensus       119 ~~  120 (311)
T d1t46a_         119 RR  120 (311)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.45  E-value=2.4e-13  Score=89.32  Aligned_cols=76  Identities=9%  Similarity=-0.039  Sum_probs=59.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-----CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-----NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-----~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..+|+.||+|++....     ..........|+.++.. .+||||+++++++..++.+||+||||+| +|.++
T Consensus        19 ~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~-~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~   97 (364)
T d1omwa3          19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYH   97 (364)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS-SCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc-CCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHH
Confidence            58999999999999999997421     11112222334566554 5899999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      |.+
T Consensus        98 l~~  100 (364)
T d1omwa3          98 LSQ  100 (364)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5.7e-13  Score=85.86  Aligned_cols=76  Identities=16%  Similarity=0.113  Sum_probs=61.9

Q ss_pred             cceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l   85 (89)
                      +|+.|....++   ..||||.++...+....+++.+|+.+|.+ ++||||++++|++.. ++..|++||||++ +|.+++
T Consensus        42 ~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~  120 (311)
T d1r0pa_          42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI  120 (311)
T ss_dssp             EEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHT-CCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh-CCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhh
Confidence            46777765543   35899999866666677889999999988 599999999999876 4689999999999 999987


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       121 ~~  122 (311)
T d1r0pa_         121 RN  122 (311)
T ss_dssp             HC
T ss_pred             cc
Confidence            64

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.4e-13  Score=85.68  Aligned_cols=76  Identities=14%  Similarity=0.171  Sum_probs=62.4

Q ss_pred             cceeEEEccCC----CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDP----DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~----~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|+.|..+.++    ..||||.+....+......+.+|+.+|.+ ++||||++++|++...+..+++||||++ ++.+++
T Consensus        22 ~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~-l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~  100 (283)
T d1mqba_          22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ-FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL  100 (283)
T ss_dssp             EEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHH
T ss_pred             EEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHh-cCCCCEeeeeEEEecCCceEEEEEecccCcchhhh
Confidence            46777766554    36999999866666666789999999988 5999999999999999999999999999 888876


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       101 ~~  102 (283)
T d1mqba_         101 RE  102 (283)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=1.8e-13  Score=89.51  Aligned_cols=76  Identities=8%  Similarity=0.028  Sum_probs=64.7

Q ss_pred             cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.++.+|+.||+|++....  .....+.+.+|+.+|.. ++||||+++++++...+.++++|||+.| +|.+++.+
T Consensus        56 ~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~  134 (350)
T d1rdqe_          56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR  134 (350)
T ss_dssp             EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHH-cCCCcEeecccccccccccccccccccccchhhhHhh
Confidence            58899999999999999997431  11235678899999877 5999999999999999999999999999 98888754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4e-13  Score=85.97  Aligned_cols=77  Identities=10%  Similarity=0.170  Sum_probs=64.5

Q ss_pred             cceeEEEccCC-------CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDP-------DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~-------~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      .|++|....++       ..||+|.+...........+.+|...+.++.+||||+++++++..++.+|++||||++ +|.
T Consensus        28 ~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~  107 (299)
T d1fgka_          28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR  107 (299)
T ss_dssp             CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred             EEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHH
Confidence            46677655444       3699999987666666788999999988866899999999999999999999999999 999


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      ++|+.
T Consensus       108 ~~i~~  112 (299)
T d1fgka_         108 EYLQA  112 (299)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            99864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=4.2e-13  Score=85.87  Aligned_cols=76  Identities=11%  Similarity=0.036  Sum_probs=64.8

Q ss_pred             cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|..+     .++..||||++.........+.+.+|+.+|.+ ++||||+++++++...+..+++|||+++ +|.++
T Consensus        28 ~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~  106 (301)
T d1lufa_          28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE-FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF  106 (301)
T ss_dssp             EEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHh-cCCCCcccceeeeccCCceEEEEEecCCCcHHHH
Confidence            46777654     35578999999866666667789999999988 5999999999999999999999999999 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       107 l~~  109 (301)
T d1lufa_         107 LRS  109 (301)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.4e-12  Score=82.43  Aligned_cols=76  Identities=9%  Similarity=0.025  Sum_probs=66.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|++|.+..+|+.||||++.... .......+.+|+.+|.. .+||||+++++++..++..++++|++.+ ++..+++.
T Consensus        17 ~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~   94 (292)
T d1unla_          17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC   94 (292)
T ss_dssp             EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHT
T ss_pred             EEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHh-cCcCCEEeeccccccccceeEEeeecccccccccccc
Confidence            68999999999999999997543 33456789999999887 5999999999999999999999999999 88887754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=5.5e-13  Score=84.38  Aligned_cols=71  Identities=14%  Similarity=0.200  Sum_probs=56.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|... ++..||||++......  .+.+.+|+.+|.++ +||||++++|++. ++.+|++||||++ +|.+++.
T Consensus        28 ~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~E~~~l~~l-~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~   99 (272)
T d1qpca_          28 EVWMGYYN-GHTKVAVKSLKQGSMS--PDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK   99 (272)
T ss_dssp             EEEEEEET-TTEEEEEEEECTTSSC--HHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTT
T ss_pred             EEEEEEEC-CCCEEEEEEEccCcCC--HHHHHHHHHHHHhC-CCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHh
Confidence            46777654 5678999999754322  45789999999885 9999999999764 5668999999999 9988764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.3e-13  Score=86.39  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhc-cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDT-SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~-sL~   82 (89)
                      .|++|.+..+|+.||||++.... +......+.+|+.+|.+ ++||||++++++|...      +.+|++||||.+ ++.
T Consensus        32 ~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~  110 (355)
T d2b1pa1          32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ  110 (355)
T ss_dssp             EEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEecccccccCceeEEEEeccchHHHH
Confidence            58999999999999999998643 34456778999999988 4999999999999753      689999999999 665


Q ss_pred             HH
Q psy13291         83 KF   84 (89)
Q Consensus        83 ~~   84 (89)
                      .+
T Consensus       111 ~~  112 (355)
T d2b1pa1         111 VI  112 (355)
T ss_dssp             HH
T ss_pred             hh
Confidence            44

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7e-13  Score=86.02  Aligned_cols=76  Identities=12%  Similarity=0.097  Sum_probs=63.8

Q ss_pred             cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~   83 (89)
                      .|++|.+..+|+.||+|++... .+....+.+.+|+.+|.. ++||||++++++|...+      .+|++||||+++|..
T Consensus        33 ~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~  111 (346)
T d1cm8a_          33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH-MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK  111 (346)
T ss_dssp             CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHH-CCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHh-cCCCCeeEEEEEeccCccccccceEEEEEecccccHHH
Confidence            5889999999999999999754 344557789999999988 49999999999998754      579999999558888


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       112 ~~~~  115 (346)
T d1cm8a_         112 LMKH  115 (346)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4e-13  Score=86.32  Aligned_cols=76  Identities=16%  Similarity=0.244  Sum_probs=63.0

Q ss_pred             cceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..     ++..||||+++..........+.+|+.++.+ ++||||++++|++..++..+++||||++ +|.++
T Consensus        35 ~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~-l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~  113 (308)
T d1p4oa_          35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY  113 (308)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGG-CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHH-cCCCCEeeeeeEEecCCceeEEEeecCCCCHHHH
Confidence            366666542     3568999999866566667789999999888 5999999999999999999999999999 99998


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      +..
T Consensus       114 ~~~  116 (308)
T d1p4oa_         114 LRS  116 (308)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.1e-12  Score=82.89  Aligned_cols=75  Identities=19%  Similarity=0.211  Sum_probs=59.9

Q ss_pred             cceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|+.|.+..++   ..+|+|.+.........+.+.+|+.+|.+ ++||||++++|++. ++.+|++||||++ +|.+++.
T Consensus        22 ~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~   99 (273)
T d1mp8a_          22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ   99 (273)
T ss_dssp             EEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhh
Confidence            46777776544   45888988765566667889999999888 59999999999885 5789999999999 9988765


Q ss_pred             h
Q psy13291         87 K   87 (89)
Q Consensus        87 ~   87 (89)
                      .
T Consensus       100 ~  100 (273)
T d1mp8a_         100 V  100 (273)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=7.8e-13  Score=84.41  Aligned_cols=71  Identities=17%  Similarity=0.174  Sum_probs=56.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|..+.+ ..||||++......  .+.+.+|+.+|.+ ++||||++++|++ .++.+|++||||++ +|..++.
T Consensus        32 ~Vy~~~~~~~-~~vAiK~l~~~~~~--~~~~~~E~~~l~~-l~h~nIv~~~g~~-~~~~~~lv~Ey~~~g~l~~~~~  103 (285)
T d1fmka3          32 EVWMGTWNGT-TRVAIKTLKPGTMS--PEAFLQEAQVMKK-LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLK  103 (285)
T ss_dssp             EEEEEEETTT-EEEEEEECCTTSSC--HHHHHHHHHHHHH-CCCTTBCCEEEEE-CSSSCEEEECCCTTCBHHHHHS
T ss_pred             EEEEEEECCC-CEEEEEEECcccCC--HHHHHHHHHHHHh-cccCCEeEEEEEE-ecCCeEEEEEecCCCchhhhhh
Confidence            4777876554 46999999754332  4678999999888 5999999999987 45678999999999 9888774

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=7.5e-13  Score=83.55  Aligned_cols=71  Identities=18%  Similarity=0.235  Sum_probs=55.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      .|+.|..  +|..||+|.++..   ...+.+.+|+.+|.++ +||||++++|++.. .+.+|++|||+++ +|.+++.+
T Consensus        22 ~Vy~~~~--~~~~vAvK~i~~~---~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~   94 (262)
T d1byga_          22 DVMLGDY--RGNKVAVKCIKND---ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS   94 (262)
T ss_dssp             EEEEEEE--TTEEEEEEECCCC---C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHH
T ss_pred             EEEEEEE--CCeEEEEEEECcH---HHHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHh
Confidence            3556654  6888999999643   2356788999999884 99999999999865 4568999999999 99999854

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.4e-12  Score=82.80  Aligned_cols=71  Identities=11%  Similarity=0.043  Sum_probs=56.1

Q ss_pred             ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291         12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK   87 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~   87 (89)
                      |++|..   +..||||++... .+....+.+.+|+.+|.+ ++||||++++|++. ++.++|+||||+| +|.+++..
T Consensus        24 Vy~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~   96 (276)
T d1uwha_          24 VYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHI   96 (276)
T ss_dssp             EEEEES---SSEEEEEECCCSSCCTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHT
T ss_pred             EEEEEE---CCEEEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhh
Confidence            555543   346999999754 334557889999999888 59999999998754 5678999999999 99999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.31  E-value=1.9e-12  Score=83.38  Aligned_cols=72  Identities=6%  Similarity=0.052  Sum_probs=60.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.+..+|+.||+|+++...    .+.+.+|+.+|..+.+||||++++++|..+  ..++++||||++ +|..+.+
T Consensus        50 ~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~  124 (328)
T d3bqca1          50 EVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ  124 (328)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT
T ss_pred             EEEEEEECCCCCEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc
Confidence            58899999999999999996432    456788999998866799999999999864  469999999999 8876654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=7.8e-12  Score=81.17  Aligned_cols=75  Identities=12%  Similarity=0.087  Sum_probs=61.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.+..+|+.||||++.........+.+++|+.+|.. ++||||+++++.+...+     .++++++ +.+ +|.++
T Consensus        23 ~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~-l~hp~iv~~~~~~~~~~~~~~~~~~l~~~-~~~g~L~~~  100 (345)
T d1pmea_          23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR-FRHENIIGINDIIRAPTIEQMKDVYLVTH-LMGADLYKL  100 (345)
T ss_dssp             CEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHH-CCCTTBCCCCEEECCSSTTTCCCEEEEEE-CCCEEHHHH
T ss_pred             EEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeeccccccceEEEEEe-ecCCchhhh
Confidence            5899999999999999999865556667789999999988 59999999999987643     3566555 556 99999


Q ss_pred             Hhh
Q psy13291         85 YTK   87 (89)
Q Consensus        85 l~~   87 (89)
                      ++.
T Consensus       101 l~~  103 (345)
T d1pmea_         101 LKT  103 (345)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.29  E-value=2.3e-12  Score=81.55  Aligned_cols=74  Identities=8%  Similarity=0.051  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~   86 (89)
                      .|++|.+. +|+.||+|++..... ....+.+.+|+.+|.+ ++||||+++++++..++..++++||+.+ ++..+.+
T Consensus        17 ~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~   92 (286)
T d1ob3a_          17 VVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV   92 (286)
T ss_dssp             EEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGG-CCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT
T ss_pred             EEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHh-CCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHh
Confidence            47888774 889999999975432 2235678899999887 5999999999999999999999999999 7666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=9.6e-12  Score=79.66  Aligned_cols=71  Identities=10%  Similarity=0.125  Sum_probs=52.4

Q ss_pred             ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHH-hcCCCCceeeEEeEEEECC----EEEEEecchhc-cHHHHH
Q psy13291         12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICM-RSSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~-~~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~~l   85 (89)
                      |+.|.  .+|+.||||+++...    .+....|.+++. ...+||||+++++++..++    .+|++||||++ +|.+++
T Consensus        19 Vy~~~--~~g~~vAvK~~~~~~----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l   92 (303)
T d1vjya_          19 VWRGK--WRGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL   92 (303)
T ss_dssp             EEEEE--ETTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHH
T ss_pred             EEEEE--ECCEEEEEEEECccc----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHH
Confidence            55664  478999999986431    233444555542 1258999999999998754    79999999999 999999


Q ss_pred             hhc
Q psy13291         86 TKV   88 (89)
Q Consensus        86 ~~~   88 (89)
                      ++.
T Consensus        93 ~~~   95 (303)
T d1vjya_          93 NRY   95 (303)
T ss_dssp             HHC
T ss_pred             hcC
Confidence            753

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2e-11  Score=78.47  Aligned_cols=75  Identities=13%  Similarity=0.154  Sum_probs=53.7

Q ss_pred             cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291         11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY   85 (89)
Q Consensus        11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l   85 (89)
                      .|++|.+..+|+    .||+|.+....+....+.+.+|+.+|.+ ++||||++++|++..+ ..++++||+.+ +|.+++
T Consensus        24 ~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~  101 (317)
T d1xkka_          24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV  101 (317)
T ss_dssp             EEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHH-CCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHH
T ss_pred             EEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEecC-CeeEEEEeccCCcccccc
Confidence            478888888876    4788888654444456789999999988 4999999999998765 46677788887 877766


Q ss_pred             hh
Q psy13291         86 TK   87 (89)
Q Consensus        86 ~~   87 (89)
                      ..
T Consensus       102 ~~  103 (317)
T d1xkka_         102 RE  103 (317)
T ss_dssp             HH
T ss_pred             cc
Confidence            54

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.4e-11  Score=78.37  Aligned_cols=77  Identities=16%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             cceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~   83 (89)
                      .|+.|....     +++.||+|++.........+.+..|+.++.++.+||||+.+++++..+ +.+|++||||++ +|.+
T Consensus        28 ~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~  107 (299)
T d1ywna1          28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST  107 (299)
T ss_dssp             EEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHH
T ss_pred             EEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHH
Confidence            366666543     446899999986666666778889999988877999999999988765 479999999999 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       108 ~l~~  111 (299)
T d1ywna1         108 YLRS  111 (299)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=6.9e-12  Score=81.08  Aligned_cols=76  Identities=5%  Similarity=-0.051  Sum_probs=60.6

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.+..+|+.||||++.... +....+.+.+|+.+|.. ++|||++++++++...     ...+++++|+.| +|.+
T Consensus        33 ~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~  111 (348)
T d2gfsa1          33 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN  111 (348)
T ss_dssp             SEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHH
T ss_pred             EEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHh-cCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhh
Confidence            58999999999999999997643 34456778999999988 4999999999998653     234555666777 9999


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      +++.
T Consensus       112 ~~~~  115 (348)
T d2gfsa1         112 IVKC  115 (348)
T ss_dssp             HHTT
T ss_pred             hccc
Confidence            9864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.8e-12  Score=82.88  Aligned_cols=77  Identities=9%  Similarity=-0.016  Sum_probs=62.0

Q ss_pred             cceeEEE---ccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291         11 KPELGLA---RLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~---~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.+   ..+|+.||+|++....   +....+.+.+|+.+|.++.+||||+++++.+...+.++++||||.+ +|.+
T Consensus        39 ~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~  118 (322)
T d1vzoa_          39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT  118 (322)
T ss_dssp             EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHH
T ss_pred             EEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHH
Confidence            4677776   4478999999986421   2223556788999998865669999999999999999999999999 9998


Q ss_pred             HHhh
Q psy13291         84 FYTK   87 (89)
Q Consensus        84 ~l~~   87 (89)
                      ++..
T Consensus       119 ~i~~  122 (322)
T d1vzoa_         119 HLSQ  122 (322)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8865

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.7e-12  Score=79.99  Aligned_cols=77  Identities=12%  Similarity=0.050  Sum_probs=60.8

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-C-H---HHHHHHHHHHHHHHhcC-CCCceeeEEeEEEECCEEEEEecchhc--cHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-N-T---QEHKRLLTDLDICMRSS-DCAHTVQFYGAMFREGDVWICMEVMDT--SLD   82 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~-~---~~~~~~~~E~~il~~~~-~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~   82 (89)
                      .|++|.+..+|+.||+|.+.... . .   .....+.+|+.+|.++. +||||+++++++..++.+|++|||+.+  ++.
T Consensus        19 ~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~   98 (273)
T d1xwsa_          19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF   98 (273)
T ss_dssp             EEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHH
T ss_pred             EEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHH
Confidence            57899999999999999997531 1 1   11234667999988753 499999999999999999999999975  777


Q ss_pred             HHHhh
Q psy13291         83 KFYTK   87 (89)
Q Consensus        83 ~~l~~   87 (89)
                      ++++.
T Consensus        99 ~~~~~  103 (273)
T d1xwsa_          99 DFITE  103 (273)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            77654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.9e-11  Score=78.56  Aligned_cols=68  Identities=6%  Similarity=-0.098  Sum_probs=54.3

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhc-cHHH
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDT-SLDK   83 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~-sL~~   83 (89)
                      .|++|.+..+|+.||||++......     ..+|+.+|.+ ++||||++++++|...      .++|++||||++ +++.
T Consensus        35 ~Vy~a~~~~~~~~vAiK~i~~~~~~-----~~~Ei~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~  108 (350)
T d1q5ka_          35 VVYQAKLCDSGELVAIKKVLQDKRF-----KNRELQIMRK-LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV  108 (350)
T ss_dssp             EEEEEEETTTCCEEEEEEEECCSSS-----CCHHHHHHHH-CCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHH
T ss_pred             EEEEEEECCCCCEEEEEEECccchH-----HHHHHHHHHh-cCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHH
Confidence            5889999999999999999754221     2369999888 5999999999999753      358999999999 5444


Q ss_pred             H
Q psy13291         84 F   84 (89)
Q Consensus        84 ~   84 (89)
                      +
T Consensus       109 l  109 (350)
T d1q5ka_         109 A  109 (350)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=2.7e-11  Score=77.49  Aligned_cols=74  Identities=7%  Similarity=0.015  Sum_probs=56.5

Q ss_pred             cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--------CCEEEEEecchhc-c
Q psy13291         11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--------EGDVWICMEVMDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--------~~~~~iv~E~~~~-s   80 (89)
                      .|++|.+..+|+.||||++.... .+....++.+|+.+|..+ +|||++++++++..        ++.+|++||||.+ +
T Consensus        25 ~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~  103 (318)
T d3blha1          25 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL  103 (318)
T ss_dssp             EEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC----------CEEEEEECCCEEH
T ss_pred             EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccccccCceEEEEEeccCCCc
Confidence            58899999999999999986542 233456788999999884 99999999998855        3468999999999 6


Q ss_pred             HHHHH
Q psy13291         81 LDKFY   85 (89)
Q Consensus        81 L~~~l   85 (89)
                      +..+.
T Consensus       104 ~~~~~  108 (318)
T d3blha1         104 AGLLS  108 (318)
T ss_dssp             HHHHT
T ss_pred             cchhh
Confidence            65443

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4.4e-11  Score=75.57  Aligned_cols=74  Identities=11%  Similarity=0.072  Sum_probs=53.8

Q ss_pred             cceeEEEcc-CCC--EEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         11 KPELGLARL-DPD--SEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        11 ~~~l~~~~~-~~~--~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      .|++|.... ++.  .||+|++...  ......+.+.+|+.+|..+ +||||++++|++.. +..+++||||++ ++.+.
T Consensus        23 ~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~  100 (273)
T d1u46a_          23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDR  100 (273)
T ss_dssp             CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHH
T ss_pred             EEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee-cchheeeeeecCcchhhh
Confidence            477776543 333  6899998753  2334567899999999885 99999999999965 467899999999 88876


Q ss_pred             Hh
Q psy13291         85 YT   86 (89)
Q Consensus        85 l~   86 (89)
                      +.
T Consensus       101 ~~  102 (273)
T d1u46a_         101 LR  102 (273)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.12  E-value=1.8e-10  Score=73.19  Aligned_cols=74  Identities=9%  Similarity=-0.011  Sum_probs=60.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK   87 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~   87 (89)
                      .|++|.+..+|+.||+|+++...+.   ..+..|+.++..+.+|||++.+++++...+..|++||||.++|.++++.
T Consensus        20 ~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~   93 (293)
T d1csna_          20 VIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL   93 (293)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEccccCc---HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecCCCHHHHHHh
Confidence            4889999999999999998754322   2456688888776677999999999999999999999997788888764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.03  E-value=7.4e-10  Score=70.19  Aligned_cols=73  Identities=12%  Similarity=0.020  Sum_probs=56.0

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT   86 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~   86 (89)
                      .|++|.+..+|+.||||++.....   ...+..|++++..+.+|++|+.+.+++..++..+++||||++++.+.+.
T Consensus        22 ~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~   94 (299)
T d1ckia_          22 DIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFN   94 (299)
T ss_dssp             EEEEEEETTTTEEEEEEEEESCTT---SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHH
T ss_pred             EEEEEEECCCCCEEEEEEEchhcc---CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCchhhhhh
Confidence            588999999999999999875422   2346789999888645555666777778889999999999886555543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.9e-10  Score=72.99  Aligned_cols=74  Identities=8%  Similarity=-0.002  Sum_probs=53.1

Q ss_pred             cceeEEEccC-CCEEEEEEEeecC-CHHHHHHHHHHHHHHHhc--CCCCceeeEEeEEEE-----CCEEEEEecchhc-c
Q psy13291         11 KPELGLARLD-PDSEWSFRITFTV-NTQEHKRLLTDLDICMRS--SDCAHTVQFYGAMFR-----EGDVWICMEVMDT-S   80 (89)
Q Consensus        11 ~~~l~~~~~~-~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~-----~~~~~iv~E~~~~-s   80 (89)
                      .|++|.+..+ ++.||+|++.... .......+.+|+.+|..+  .+||||++++++|..     ...++++||||++ +
T Consensus        22 ~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~  101 (305)
T d1blxa_          22 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDL  101 (305)
T ss_dssp             EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBH
T ss_pred             EEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCc
Confidence            4788888765 5679999997532 222233456677776543  389999999999864     2479999999999 5


Q ss_pred             HHHH
Q psy13291         81 LDKF   84 (89)
Q Consensus        81 L~~~   84 (89)
                      +...
T Consensus       102 ~~~~  105 (305)
T d1blxa_         102 TTYL  105 (305)
T ss_dssp             HHHH
T ss_pred             hhhh
Confidence            5543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.10  E-value=7.2e-06  Score=52.32  Aligned_cols=67  Identities=7%  Similarity=-0.013  Sum_probs=48.9

Q ss_pred             cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC----------CCCceeeEEeEEEE--CCEEEEEecchh
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS----------DCAHTVQFYGAMFR--EGDVWICMEVMD   78 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~----------~hpniv~~~~~~~~--~~~~~iv~E~~~   78 (89)
                      .|++|.+..+|+.||||++...  ....+.+.+|+.++..+.          +||||+++++++..  ....+.+++++.
T Consensus        28 ~Vy~~~~~~~g~~vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~  105 (362)
T d1q8ya_          28 TVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEV  105 (362)
T ss_dssp             EEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECC
T ss_pred             EEEEEEECCCCCEEEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecc
Confidence            5889999999999999999643  333456777888876531          46899999988765  456666666655


Q ss_pred             c
Q psy13291         79 T   79 (89)
Q Consensus        79 ~   79 (89)
                      +
T Consensus       106 ~  106 (362)
T d1q8ya_         106 L  106 (362)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.27  E-value=0.00025  Score=41.43  Aligned_cols=66  Identities=8%  Similarity=-0.112  Sum_probs=43.4

Q ss_pred             cceeEEEccCCCEEEEEEEeecCC-----------------HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEE
Q psy13291         11 KPELGLARLDPDSEWSFRITFTVN-----------------TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWIC   73 (89)
Q Consensus        11 ~~~l~~~~~~~~~~AvK~i~~~~~-----------------~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv   73 (89)
                      .|++|.. .+|+.+|+|++.....                 .........|...+.+ +.|++++..++..  .  .+++
T Consensus        15 ~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~v~~~~~~~--~--~~lv   88 (191)
T d1zara2          15 AVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK-LQGLAVPKVYAWE--G--NAVL   88 (191)
T ss_dssp             EEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH-TTTSSSCCEEEEE--T--TEEE
T ss_pred             EEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHH-ccCCCcceEEEec--C--CEEE
Confidence            3677765 4789999998753110                 0112345578888877 4899998877542  2  2689


Q ss_pred             ecchhc-cHH
Q psy13291         74 MEVMDT-SLD   82 (89)
Q Consensus        74 ~E~~~~-sL~   82 (89)
                      |||+++ .+.
T Consensus        89 me~~~~~~~~   98 (191)
T d1zara2          89 MELIDAKELY   98 (191)
T ss_dssp             EECCCCEEGG
T ss_pred             EEeecccccc
Confidence            999998 543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.22  E-value=0.053  Score=32.07  Aligned_cols=65  Identities=6%  Similarity=-0.103  Sum_probs=44.1

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF   84 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~   84 (89)
                      ..+..+.+|........ ....+.+|...+..+..+-.+.+++.....++..|++|++++| ++.+.
T Consensus        35 ~~~~~~vlk~~~~~~~~-~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          35 GENENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             CSSCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             eCCCeEEEEEcCCCccc-chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence            45667788877643211 1234566777766544454467777888888999999999999 87654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.78  E-value=0.15  Score=29.83  Aligned_cols=60  Identities=7%  Similarity=-0.022  Sum_probs=37.8

Q ss_pred             cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291         19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFREGDVWICMEVMDT-SLD   82 (89)
Q Consensus        19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~~~~~~iv~E~~~~-sL~   82 (89)
                      ..+..+.+|.-....    ...+..|...|..+..+ -.+.+++.....++..|++||+++| ++.
T Consensus        33 ~~~~~~vlK~~~~~~----~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          33 QGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             TTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCCCEEEEEeCCccC----HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            345567888654322    12244556655443222 2367778777788899999999998 763