Psyllid ID: psy1352

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MCTKFIGRLYLGMFEQFLIAICEIGPRSFGKSESSSIRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccHHcccccHHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccEHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MCTKFIGRLYLGMFEQFLIAICeigprsfgksesssirVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWAcsnsfsspfvksdqefvyetehfnGVGELLEILGSIIngfalplkneHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFlekdptltepvVKGLLkywprtcsqkEVMFLGEIEEILdvieptqfiniqEPLFRQIAkcvssphfqVAERALYFWNNEYIMSLMEEnnhvvmpiMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYkaerqnspfghafstslamprDELAVAERALYFWNNEYIMSLMEEnnhvvmpiMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK
Flexible Loop (DISEMBL)
MCTKFIGRLYLGMFEQFLIAICEIGPrsfgksesssIRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK
Low Complexity Region (SEG)
MCTKFIGRLYLGMFEQFLIAICEIGPRSFGKSESSSIRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHklflvkvllplhkvkclSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK
Disordered region (IsUnstruct)
**TKFIGRLYLGMFEQFLIAICEIGPRSFGK***SSIRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKA******FGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELT*********
Disordered Region (DISOPRED)
**TKFIGRLYLGMFEQFLIAICEIGPR*********IRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQN***********AM******V**RALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTA*Y******
Disordered Region (DISEMBL)
MCTKFIGRLYLGMFEQFLIAICEIGPRS*********RVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK
Disordered Region (DISPRO)
MCTKFIGRLYLGMFEQFLIAICEIGPRS***S*SSSIRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAER**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MCTKFIGRLYLGMFEQFLIAICEIGPRSFGKSESSSIRVTTFSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSSPFVKSDQEFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	399	2.2.26 [Sep-21-2011]
Q61151	467	Serine/threonine-protein	yes	N/A	0.518	0.443	0.826	1e-103
Q16537	467	Serine/threonine-protein	yes	N/A	0.518	0.443	0.826	1e-103
A4FV68	467	Serine/threonine-protein	yes	N/A	0.518	0.443	0.826	1e-103
Q6PD03	486	Serine/threonine-protein	no	N/A	0.604	0.495	0.731	1e-100
Q15172	486	Serine/threonine-protein	no	N/A	0.518	0.425	0.806	4e-99
Q28647	500	Serine/threonine-protein	no	N/A	0.521	0.416	0.788	1e-98
Q15173	497	Serine/threonine-protein	no	N/A	0.508	0.408	0.798	6e-97
Q28653	586	Serine/threonine-protein	no	N/A	0.528	0.360	0.739	3e-92
Q14738	602	Serine/threonine-protein	no	N/A	0.528	0.350	0.739	4e-92
Q60996	524	Serine/threonine-protein	no	N/A	0.506	0.385	0.757	2e-89

>sp|Q61151|2A5E_MOUSE Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Mus musculus GN=Ppp2r5e PE=2 SV=3

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/207 (82%), Positives = 195/207 (94%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGV ELLEILGSIINGFALPLK EHK FLVKVL+PLH V+ LSL+HAQLAYC
Sbjct: 228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct: 288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct: 348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
           YNVLK FMEMNS +FDELTA YK++RQ
Sbjct: 408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Interacts with cyclin G in vitro.
Mus musculus (taxid: 10090)

>sp|Q16537|2A5E_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Homo sapiens GN=PPP2R5E PE=1 SV=1

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/207 (82%), Positives = 195/207 (94%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGV ELLEILGSIINGFALPLK EHK FLVKVL+PLH V+ LSL+HAQLAYC
Sbjct: 228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct: 288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct: 348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
           YNVLK FMEMNS +FDELTA YK++RQ
Sbjct: 408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

Homo sapiens (taxid: 9606)

>sp|A4FV68|2A5E_BOVIN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Bos taurus GN=PPP2R5E PE=1 SV=1

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/207 (82%), Positives = 195/207 (94%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGV ELLEILGSIINGFALPLK EHK FLVKVL+PLH V+ LSL+HAQLAYC
Sbjct: 228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct: 288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct: 348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
           YNVLK FMEMNS +FDELTA YK++RQ
Sbjct: 408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

Bos taurus (taxid: 9913)

>sp|Q6PD03|2A5A_MOUSE Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform OS=Mus musculus GN=Ppp2r5a PE=1 SV=1

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/242 (73%), Positives = 204/242 (84%), Gaps = 1/242 (0%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEHFNGV ELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+L+HAQLAYC
Sbjct: 236 FIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYC 295

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPV++GLLK+WP+TCSQKEVMFLGEIEEILDVIEPTQF  I+EPLF+Q
Sbjct: 296 VVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQ 355

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           I+KCVSS HFQVAERALYFWNNEYI+SL+EEN   ++PIMF +LY+ISKEHWNQTIVALV
Sbjct: 356 ISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNQTIVALV 415

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEY 335
           YNVLKT MEMN +LFD+LT++YKAERQ           L    +EL + ++AL   NN Y
Sbjct: 416 YNVLKTLMEMNGKLFDDLTSSYKAERQREKKKELEREELWKKLEELQL-KKALEKQNNAY 474

Query: 336 IM 337
            M
Sbjct: 475 NM 476

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

Mus musculus (taxid: 10090)

>sp|Q15172|2A5A_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform OS=Homo sapiens GN=PPP2R5A PE=1 SV=1

 Score =  362 bits (928), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 167/207 (80%), Positives = 190/207 (91%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEHFNGV ELLEILGSIINGFALPLK EHK FL+KVL+P+H  K L+L+HAQLAYC
Sbjct: 236 FIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYC 295

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPV++GLLK+WP+TCSQKEVMFLGEIEEILDVIEPTQF  I+EPLF+Q
Sbjct: 296 VVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQ 355

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           I+KCVSS HFQVAERALYFWNNEYI+SL+EEN   ++PIMF +LY+ISKEHWN TIVALV
Sbjct: 356 ISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNPTIVALV 415

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
           YNVLKT MEMN +LFD+LT++YKAERQ
Sbjct: 416 YNVLKTLMEMNGKLFDDLTSSYKAERQ 442

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

Homo sapiens (taxid: 9606)

>sp|Q28647|2A5B_RABIT Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2R5B PE=2 SV=1

 Score =  360 bits (923), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 164/208 (78%), Positives = 191/208 (91%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YE EHFNGV ELLEILGSIINGFALPLK EHK FLV+VL+PLH VK LS++HAQLAYC
Sbjct: 242 FIYEFEHFNGVAELLEILGSIINGFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYC 301

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTE V++GLLKYWP+TC+QKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct: 302 VVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEVEEILDVIEPSQFVKIQEPLFKQ 361

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +A+CVSSPHFQVAERALYFWNNEYI+SL+E+N H V+P +F  LY++SKEHWNQTIV+L+
Sbjct: 362 VARCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLI 421

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMN +LFDELTA+YK E+Q 
Sbjct: 422 YNVLKTFMEMNGKLFDELTASYKLEKQQ 449

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. The phosphorylated form mediates the interaction between AKT1 and PP2A phosphatase leading to dephosphorylation of AKT1 on the 'Thr-308' and 'Ser-373' residues.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q15173|2A5B_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Homo sapiens GN=PPP2R5B PE=1 SV=1

 Score =  354 bits (909), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 162/203 (79%), Positives = 188/203 (92%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YE EHFNGV ELLEILGSIINGFALPLK EHK FLV+VL+PLH VK LS++HAQLAYC
Sbjct: 242 FIYEFEHFNGVAELLEILGSIINGFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYC 301

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTE V++GLLKYWP+TC+QKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct: 302 VVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQ 361

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +A+CVSSPHFQVAERALYFWNNEYI+SL+E+N H V+P +F  LY++SKEHWNQTIV+L+
Sbjct: 362 VARCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLI 421

Query: 276 YNVLKTFMEMNSRLFDELTANYK 298
           YNVLKTFMEMN +LFDELTA+YK
Sbjct: 422 YNVLKTFMEMNGKLFDELTASYK 444

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. The phosphorylated form mediates the interaction between AKT1 and PP2A phosphatase leading to dephosphorylation of AKT1 on the 'Thr-308' and 'Ser-373' residues.

Homo sapiens (taxid: 9606)

>sp|Q28653|2A5D_RABIT Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Oryctolagus cuniculus GN=PPP2R5D PE=2 SV=1

 Score =  338 bits (868), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 156/211 (73%), Positives = 181/211 (85%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EHK+FL++VLLPLHKVK LS+YH QLAYC
Sbjct: 271 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYC 330

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEK+ +LTEPV+ GLLK+WP+T S KEVMFL E+EEILDVIEP++F  + EPLFRQ
Sbjct: 331 VVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQ 390

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   V+PIMFPALYR SK HWN+TI  L+
Sbjct: 391 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLI 450

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQNSPF 306
           YN LK FMEMN +LFD+ T  YKAE+Q   F
Sbjct: 451 YNALKLFMEMNQKLFDDCTQQYKAEKQKGRF 481

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q14738|2A5D_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Homo sapiens GN=PPP2R5D PE=1 SV=1

 Score =  338 bits (867), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 156/211 (73%), Positives = 181/211 (85%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EHK+FL++VLLPLHKVK LS+YH QLAYC
Sbjct: 287 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYC 346

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEK+ +LTEPV+ GLLK+WP+T S KEVMFL E+EEILDVIEP++F  + EPLFRQ
Sbjct: 347 VVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQ 406

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   V+PIMFPALYR SK HWN+TI  L+
Sbjct: 407 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLI 466

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQNSPF 306
           YN LK FMEMN +LFD+ T  YKAE+Q   F
Sbjct: 467 YNALKLFMEMNQKLFDDCTQQYKAEKQKGRF 497

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

Homo sapiens (taxid: 9606)

>sp|Q60996|2A5G_MOUSE Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform OS=Mus musculus GN=Ppp2r5c PE=1 SV=2

 Score =  330 bits (845), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 153/202 (75%), Positives = 175/202 (86%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EHK+FL+KVLLPLHKVK LS+YH QLAYC
Sbjct: 211 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 270

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ
Sbjct: 271 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 330

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+
Sbjct: 331 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI 390

Query: 276 YNVLKTFMEMNSRLFDELTANY 297
           YN LK FMEMN +LFD+ T  +
Sbjct: 391 YNALKLFMEMNQKLFDDCTQQF 412

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. The PP2A-PPP2R5C holoenzyme may activate TP53 and play a role in DNA damage-induced inhibition of cell proliferation. PP2A-PPP2R5C may also regulate the ERK signaling pathway through ERK dephosphorylation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
195497534	832	GE25516 [Drosophila yakuba] gi|194182242	0.754	0.361	0.605	1e-115
189238934	466	PREDICTED: similar to widerborst CG5643-	0.516	0.442	0.932	1e-112
270009875	432	hypothetical protein TcasGA2_TC009194 [T	0.516	0.476	0.932	1e-112
350427492	527	PREDICTED: serine/threonine-protein phos	0.521	0.394	0.913	1e-110
307178082	473	Serine/threonine-protein phosphatase 2A	0.521	0.439	0.918	1e-110
328784987	526	PREDICTED: serine/threonine-protein phos	0.521	0.395	0.903	1e-110
380026055	512	PREDICTED: serine/threonine-protein phos	0.521	0.406	0.903	1e-110
194745702	859	GF18705 [Drosophila ananassae] gi|190628	0.518	0.240	0.903	1e-109
195113633	707	GI10753 [Drosophila mojavensis] gi|19391	0.521	0.294	0.899	1e-109
195444467	526	GK11331 [Drosophila willistoni] gi|19416	0.518	0.393	0.903	1e-109

>gi|195497534|ref|XP_002096141.1| GE25516 [Drosophila yakuba] gi|194182242|gb|EDW95853.1| GE25516 [Drosophila yakuba]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/340 (60%), Positives = 245/340 (72%), Gaps = 39/340 (11%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EHK FL+KVLLPLHK K LS+YH QL YC
Sbjct: 366 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHKAKSLSVYHPQLTYC 425

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKDP+L+E V+K LLK+WP+T S KEVMFL E+EE+LDVIEP +F  +  PLFRQ
Sbjct: 426 VVQFLEKDPSLSEAVIKSLLKFWPKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQ 485

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALY+WNNEYIMSL+ +N+ +++PIMFPAL R SK HWN+TI  L+
Sbjct: 486 IAKCVSSPHFQVAERALYYWNNEYIMSLIADNSAMILPIMFPALNRNSKTHWNKTIHGLI 545

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQNS------------------------------- 304
           YN LK FMEM+ RLFDE + NYK E+Q S                               
Sbjct: 546 YNALKLFMEMDQRLFDECSKNYKQEKQISLLKFWPKTHSPKEVMFLNELEELLDVIEPAE 605

Query: 305 ------PFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRI 358
                 P     +  ++ P     VAERALY+WNNEYIMSL+ +N+ V++PIMFPAL R 
Sbjct: 606 FQKVMVPLFRQIAKCVSSPH--FQVAERALYYWNNEYIMSLIADNSAVILPIMFPALNRN 663

Query: 359 SKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQ 398
           SK HWN+TI  L+YN LK FMEM+ RLFDE + NYK E+Q
Sbjct: 664 SKTHWNKTIHGLIYNALKLFMEMDQRLFDECSKNYKQEKQ 703

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238934|ref|XP_971164.2| PREDICTED: similar to widerborst CG5643-PC [Tribolium castaneum]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/208 (93%), Positives = 202/208 (97%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVL+PLHKVKCLSLYHAQLAYC
Sbjct: 222 FVYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLIPLHKVKCLSLYHAQLAYC 281

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKDPTLTEPVV+GLLKYWP+TCSQKEVMFLGEIEE+LDVIEP+QF  IQEPLFRQ
Sbjct: 282 VVQFLEKDPTLTEPVVRGLLKYWPKTCSQKEVMFLGEIEEVLDVIEPSQFTRIQEPLFRQ 341

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHV+MPIMFPALYRISKEHWNQTIVALV
Sbjct: 342 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVIMPIMFPALYRISKEHWNQTIVALV 401

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMNS+LFDELT +YKAERQ 
Sbjct: 402 YNVLKTFMEMNSKLFDELTVSYKAERQK 429

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270009875|gb|EFA06323.1| hypothetical protein TcasGA2_TC009194 [Tribolium castaneum]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/208 (93%), Positives = 202/208 (97%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVL+PLHKVKCLSLYHAQLAYC
Sbjct: 188 FVYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLIPLHKVKCLSLYHAQLAYC 247

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKDPTLTEPVV+GLLKYWP+TCSQKEVMFLGEIEE+LDVIEP+QF  IQEPLFRQ
Sbjct: 248 VVQFLEKDPTLTEPVVRGLLKYWPKTCSQKEVMFLGEIEEVLDVIEPSQFTRIQEPLFRQ 307

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHV+MPIMFPALYRISKEHWNQTIVALV
Sbjct: 308 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVIMPIMFPALYRISKEHWNQTIVALV 367

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMNS+LFDELT +YKAERQ 
Sbjct: 368 YNVLKTFMEMNSKLFDELTVSYKAERQK 395

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427492|ref|XP_003494775.1| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform-like [Bombus impatiens]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/208 (91%), Positives = 202/208 (97%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAYC
Sbjct: 274 FVYETEHFNGVGELLEILGSIINGFALPLKVEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 333

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPV++GLLK+WP+TCSQKEVMFLGEIEEILDVIEP+QF+ IQEPLFRQ
Sbjct: 334 VVQFLEKDATLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPSQFVKIQEPLFRQ 393

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IA+CVSSPHFQVAERALYFWNNEYIMSL+EENNHV+M IMFPALYRISKEHWNQTIVALV
Sbjct: 394 IARCVSSPHFQVAERALYFWNNEYIMSLIEENNHVIMGIMFPALYRISKEHWNQTIVALV 453

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMNS+LFDELTA+YK+ERQ 
Sbjct: 454 YNVLKTFMEMNSKLFDELTASYKSERQK 481

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178082|gb|EFN66909.1| Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform [Camponotus floridanus]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/208 (91%), Positives = 202/208 (97%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAYC
Sbjct: 222 FVYETEHFNGVGELLEILGSIINGFALPLKVEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 281

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV+GLLK+WP+TCSQKEVMFLGEIEEILDVIEP+QF+ IQEPLFRQ
Sbjct: 282 VVQFLEKDATLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPSQFVKIQEPLFRQ 341

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IA+CVSSPHFQVAERALYFWNNEYIMSL+EENNHV+M IMFPALYRISKEHWNQTIVALV
Sbjct: 342 IARCVSSPHFQVAERALYFWNNEYIMSLIEENNHVIMGIMFPALYRISKEHWNQTIVALV 401

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMNS+LFDELTA+YK+ERQ 
Sbjct: 402 YNVLKTFMEMNSKLFDELTASYKSERQK 429

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328784987|ref|XP_623652.2| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform-like isoform 1 [Apis mellifera]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/208 (90%), Positives = 202/208 (97%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAYC
Sbjct: 274 FVYETEHFNGVGELLEILGSIINGFALPLKVEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 333

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPV++GLLK+WP+TCSQKEVMFLGEIEEILDVIEP+QF+ IQEPLFRQ
Sbjct: 334 VVQFLEKDATLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPSQFVKIQEPLFRQ 393

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IA+CVSSPHFQVAERAL+FWNNEYIMSL+EENNHV+M IMFPALYRISKEHWNQTI+ALV
Sbjct: 394 IARCVSSPHFQVAERALFFWNNEYIMSLIEENNHVIMGIMFPALYRISKEHWNQTIIALV 453

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMNS+LFDELTA+YK+ERQ 
Sbjct: 454 YNVLKTFMEMNSKLFDELTASYKSERQK 481

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380026055|ref|XP_003696777.1| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform-like [Apis florea]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/208 (90%), Positives = 202/208 (97%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           FVYETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAYC
Sbjct: 260 FVYETEHFNGVGELLEILGSIINGFALPLKVEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 319

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPV++GLLK+WP+TCSQKEVMFLGEIEEILDVIEP+QF+ IQEPLFRQ
Sbjct: 320 VVQFLEKDATLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPSQFVKIQEPLFRQ 379

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IA+CVSSPHFQVAERAL+FWNNEYIMSL+EENNHV+M IMFPALYRISKEHWNQTI+ALV
Sbjct: 380 IARCVSSPHFQVAERALFFWNNEYIMSLIEENNHVIMGIMFPALYRISKEHWNQTIIALV 439

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQN 303
           YNVLKTFMEMNS+LFDELTA+YK+ERQ 
Sbjct: 440 YNVLKTFMEMNSKLFDELTASYKSERQK 467

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194745702|ref|XP_001955326.1| GF18705 [Drosophila ananassae] gi|190628363|gb|EDV43887.1| GF18705 [Drosophila ananassae]

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/207 (90%), Positives = 199/207 (96%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAYC
Sbjct: 560 FIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 619

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           +VQFLEKDP LTEPVV+GLLK+WP+TCSQKEVMFLGEIEEILDVI+P QF+ IQEPLFRQ
Sbjct: 620 IVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQ 679

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALY WNNEY MSL+EENN V+MPIMFPALYRISKEHWNQTIVALV
Sbjct: 680 IAKCVSSPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALV 739

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
           YNVLKTFMEMNS+LFDELT++YKAERQ
Sbjct: 740 YNVLKTFMEMNSKLFDELTSSYKAERQ 766

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195113633|ref|XP_002001372.1| GI10753 [Drosophila mojavensis] gi|193917966|gb|EDW16833.1| GI10753 [Drosophila mojavensis]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/208 (89%), Positives = 200/208 (96%)

Query: 95  EFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAY 154
           +F+YETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAY
Sbjct: 407 KFIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAY 466

Query: 155 CVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFR 214
           C+VQFLEKDP LTEPVV+GLLK+WP+TCSQKEVMFLGEIEEILDVI+P QF+ IQEPLFR
Sbjct: 467 CIVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFR 526

Query: 215 QIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVAL 274
           QIAKCVSSPHFQVAERALY WNNEY MSL+EENN V+MPIMFPALYRISKEHWNQTIVAL
Sbjct: 527 QIAKCVSSPHFQVAERALYLWNNEYAMSLIEENNPVIMPIMFPALYRISKEHWNQTIVAL 586

Query: 275 VYNVLKTFMEMNSRLFDELTANYKAERQ 302
           VYNVLKTFMEMNS+LFDELT++YKAERQ
Sbjct: 587 VYNVLKTFMEMNSKLFDELTSSYKAERQ 614

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195444467|ref|XP_002069880.1| GK11331 [Drosophila willistoni] gi|194165965|gb|EDW80866.1| GK11331 [Drosophila willistoni]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/207 (90%), Positives = 199/207 (96%)

Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYC 155
           F+YETEHFNGVGELLEILGSIINGFALPLK EHK FLVKVLLPLHKVKCLSLYHAQLAYC
Sbjct: 223 FIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 282

Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           +VQFLEKDP LTEPVV+GLLK+WP+TCSQKEVMFLGEIEEILDVI+P QF+ IQEPLFRQ
Sbjct: 283 IVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQ 342

Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           IAKCVSSPHFQVAERALY WNNEY MSL+EENN V+MPIMFPALYRISKEHWNQTIVALV
Sbjct: 343 IAKCVSSPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALV 402

Query: 276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
           YNVLKTFMEMNS+LFDELT++YKAERQ
Sbjct: 403 YNVLKTFMEMNSKLFDELTSSYKAERQ 429

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
FB|FBgn0027492	524	wdb "widerborst" [Drosophila m	0.518	0.395	0.826	2.5e-90
UNIPROTKB|E1C2B8	467	PPP2R5E "Uncharacterized prote	0.518	0.443	0.768	2.7e-88
UNIPROTKB|F1NLM6	462	PPP2R5E "Uncharacterized prote	0.518	0.448	0.768	2.7e-88
UNIPROTKB|A4FV68	467	PPP2R5E "Serine/threonine-prot	0.518	0.443	0.768	2.7e-88
UNIPROTKB|F6V7D9	467	PPP2R5E "Uncharacterized prote	0.518	0.443	0.768	2.7e-88
UNIPROTKB|Q16537	467	PPP2R5E "Serine/threonine-prot	0.518	0.443	0.768	2.7e-88
UNIPROTKB|B7ZKK9	462	PPP2R5E "PPP2R5E protein" [Hom	0.518	0.448	0.753	1e-86
UNIPROTKB|J3KQN6	391	PPP2R5E "Serine/threonine-prot	0.518	0.529	0.768	3.3e-86
UNIPROTKB|I3LGC0	317	I3LGC0 "Uncharacterized protei	0.518	0.652	0.768	3.3e-86
MGI|MGI:1349473	467	Ppp2r5e "protein phosphatase 2	0.518	0.443	0.768	3.3e-86

FB|FBgn0027492 wdb "widerborst" [Drosophila melanogaster (taxid:7227)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 171/207 (82%), Positives = 183/207 (88%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             F+YETEHFNGVGELLEILGSIINGFALPLK EH                 SLYHAQLAYC
Sbjct:   223 FIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYC 282

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP LTEPVV+GLLK+WP+TCSQKEVMFLGEIEEILDVI+P QF+ IQEPLFRQ
Sbjct:   283 IVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQ 342

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY WNNEY MSL+EENN V+MPIMFPALYRISKEHWNQTIVALV
Sbjct:   343 IAKCVSSPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALV 402

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLKTFMEMNS+LFDELT++YKAERQ
Sbjct:   403 YNVLKTFMEMNSKLFDELTSSYKAERQ 429

GO:0000159 "protein phosphatase type 2A complex" evidence=ISS

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IMP

GO:0051225 "spindle assembly" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IDA

UNIPROTKB|E1C2B8 PPP2R5E "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 862 (308.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

UNIPROTKB|F1NLM6 PPP2R5E "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 862 (308.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   233 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 292

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   293 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 352

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   353 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 412

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   413 YNVLKAFMEMNSTMFDELTATYKSDRQ 439

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

UNIPROTKB|A4FV68 PPP2R5E "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform" [Bos taurus (taxid:9913)]

 Score = 862 (308.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

UNIPROTKB|F6V7D9 PPP2R5E "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 862 (308.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

UNIPROTKB|Q16537 PPP2R5E "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform" [Homo sapiens (taxid:9606)]

 Score = 862 (308.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|B7ZKK9 PPP2R5E "PPP2R5E protein" [Homo sapiens (taxid:9606)]

 Score = 847 (303.2 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
 Identities = 156/207 (75%), Positives = 179/207 (86%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA Y  +++
Sbjct:   408 YNVLKAFMEMNSTMFDELTATYNEKKK 434

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|J3KQN6 PPP2R5E "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform" [Homo sapiens (taxid:9606)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   152 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 211

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   212 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 271

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   272 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 331

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   332 YNVLKAFMEMNSTMFDELTATYKSDRQ 358

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

UNIPROTKB|I3LGC0 I3LGC0 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:    78 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 137

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   138 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 197

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   198 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 257

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   258 YNVLKAFMEMNSTMFDELTATYKSDRQ 284

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

MGI|MGI:1349473 Ppp2r5e "protein phosphatase 2, regulatory subunit B (B56), epsilon isoform" [Mus musculus (taxid:10090)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 159/207 (76%), Positives = 181/207 (87%)

Query:    96 FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
             FVYETEHFNGV ELLEILGSIINGFALPLK EH                 SL+HAQLAYC
Sbjct:   228 FVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYC 287

Query:   156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
             +VQFLEKDP+LTEPV++GL+K+WP+TCSQKEVMFLGE+EEILDVIEP+QF+ IQEPLF+Q
Sbjct:   288 IVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQ 347

Query:   216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
             IAKCVSSPHFQVAERALY+WNNEYIMSL+EEN++V++PIMF +LYRISKEHWN  IVALV
Sbjct:   348 IAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALV 407

Query:   276 YNVLKTFMEMNSRLFDELTANYKAERQ 302
             YNVLK FMEMNS +FDELTA YK++RQ
Sbjct:   408 YNVLKAFMEMNSTMFDELTATYKSDRQ 434

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0005737 "cytoplasm" evidence=TAS

GO:0007165 "signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q61151	2A5E_MOUSE	No assigned EC number	0.8260	0.5187	0.4432	yes	N/A
P38903	2A5D_YEAST	No assigned EC number	0.5676	0.5087	0.2681	yes	N/A
Q8RW96	2A5G_ARATH	No assigned EC number	0.5721	0.5213	0.3984	yes	N/A
A4FV68	2A5E_BOVIN	No assigned EC number	0.8260	0.5187	0.4432	yes	N/A
Q16537	2A5E_HUMAN	No assigned EC number	0.8260	0.5187	0.4432	yes	N/A
Q10428	2AD1_SCHPO	No assigned EC number	0.6057	0.5162	0.3759	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	399
pfam01603	405	pfam01603, B56, Protein phosphatase 2A regulatory	1e-109
pfam01603	405	pfam01603, B56, Protein phosphatase 2A regulatory	3e-28
PLN00122	170	PLN00122, PLN00122, serine/threonine protein phosp	1e-27
PLN00122	170	PLN00122, PLN00122, serine/threonine protein phosp	4e-27

>gnl|CDD|216599 pfam01603, B56, Protein phosphatase 2A regulatory B subunit (B56 family)

 Score =  326 bits (839), Expect = e-109
 Identities = 132/208 (63%), Positives = 163/208 (78%)

Query: 95  EFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAY 154
            F+YETE  NGV ELLEILGSIINGFALPLK EHK FL+KVLLPLHK K LSLYH QL+Y
Sbjct: 177 RFIYETEKPNGVAELLEILGSIINGFALPLKEEHKDFLLKVLLPLHKSKHLSLYHQQLSY 236

Query: 155 CVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFR 214
           CVVQF+EKDP+L E V++GLLK+WP T S KEV+FL E+EEIL+ I P +F  I  PLF+
Sbjct: 237 CVVQFIEKDPSLAEEVIRGLLKHWPVTNSSKEVLFLDELEEILEKIPPEEFQKIMVPLFK 296

Query: 215 QIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVAL 274
            +A+C+SSPHFQVAERAL  WNNEY ++L+ +N+ +++PI+FPALYR +K HWNQ++  L
Sbjct: 297 ILARCISSPHFQVAERALKLWNNEYFVNLISDNSKLILPILFPALYRNAKNHWNQSVRNL 356

Query: 275 VYNVLKTFMEMNSRLFDELTANYKAERQ 302
             NVLK  ME++  LFDE    YK +  
Sbjct: 357 ALNVLKLLMEIDPDLFDECGNKYKEKEA 384

Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism. The ability of this widely distributed heterotrimeric enzyme to act on a diverse array of substrates is largely controlled by the nature of its regulatory B subunit. There are multiple families of B subunits (See also pfam01240), this family is called the B56 family. Length = 405

>gnl|CDD|216599 pfam01603, B56, Protein phosphatase 2A regulatory B subunit (B56 family)

 Score =  114 bits (287), Expect = 3e-28
 Identities = 40/77 (51%), Positives = 55/77 (71%)

Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 382
           VAERAL  WNNEY ++L+ +N+ +++PI+FPALYR +K HWNQ++  L  NVLK  ME++
Sbjct: 309 VAERALKLWNNEYFVNLISDNSKLILPILFPALYRNAKNHWNQSVRNLALNVLKLLMEID 368

Query: 383 SRLFDELTANYKAERQK 399
             LFDE    YK +  K
Sbjct: 369 PDLFDECGNKYKEKEAK 385

Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism. The ability of this widely distributed heterotrimeric enzyme to act on a diverse array of substrates is largely controlled by the nature of its regulatory B subunit. There are multiple families of B subunits (See also pfam01240), this family is called the B56 family. Length = 405

>gnl|CDD|215064 PLN00122, PLN00122, serine/threonine protein phosphatase 2A; Provisional

 Score =  106 bits (267), Expect = 1e-27
 Identities = 34/77 (44%), Positives = 53/77 (68%)

Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 382
           VAERAL+ WNN++I++L+ +N  V++PI+FPAL + ++ HWNQ +  L  NV K F EM+
Sbjct: 68  VAERALFLWNNDHIVNLIAQNRQVILPIIFPALEKNTRGHWNQAVHGLTLNVRKMFSEMD 127

Query: 383 SRLFDELTANYKAERQK 399
             LF+E    ++ +  K
Sbjct: 128 PELFEECLRKFEEDEAK 144

Length = 170

>gnl|CDD|215064 PLN00122, PLN00122, serine/threonine protein phosphatase 2A; Provisional

 Score =  105 bits (264), Expect = 4e-27
 Identities = 33/78 (42%), Positives = 53/78 (67%)

Query: 227 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 286
           VAERAL+ WNN++I++L+ +N  V++PI+FPAL + ++ HWNQ +  L  NV K F EM+
Sbjct: 68  VAERALFLWNNDHIVNLIAQNRQVILPIIFPALEKNTRGHWNQAVHGLTLNVRKMFSEMD 127

Query: 287 SRLFDELTANYKAERQNS 304
             LF+E    ++ +   +
Sbjct: 128 PELFEECLRKFEEDEAKA 145

Length = 170

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	399
2npp_B	449	Structure Of The Protein Phosphatase 2a Holoenzyme		4e-80
2npp_B	449	Structure Of The Protein Phosphatase 2a Holoenzyme		5e-23
2iae_B	407	Crystal Structure Of A Protein Phosphatase 2a (Pp2a		6e-80
2iae_B	407	Crystal Structure Of A Protein Phosphatase 2a (Pp2a		6e-23
3fga_B	403	Structural Basis Of Pp2a And Sgo Interaction Length		6e-80
3fga_B	403	Structural Basis Of Pp2a And Sgo Interaction Length		7e-23
2nyl_B	388	Crystal Structure Of Protein Phosphatase 2a (Pp2a)		1e-77
2nyl_B	388	Crystal Structure Of Protein Phosphatase 2a (Pp2a)		2e-21
2jak_A	392	Human Pp2a Regulatory Subunit B56g Length = 392		3e-67
2jak_A	392	Human Pp2a Regulatory Subunit B56g Length = 392		4e-10

>pdb|2NPP|B Chain B, Structure Of The Protein Phosphatase 2a Holoenzyme Length = 449

Iteration: 1
 Score =  295 bits (754), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 139/202 (68%), Positives = 159/202 (78%)
Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EH                 S+YH QLAYC
Sbjct: 211 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 270
Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ
Sbjct: 271 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 330
Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+
Sbjct: 331 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI 390
Query: 276 YNVLKTFMEMNSRLFDELTANY 297
           YN LK FMEMN +LFD+ T  +
Sbjct: 391 YNALKLFMEMNQKLFDDCTQQF 412

>pdb|2NPP|B Chain B, Structure Of The Protein Phosphatase 2a Holoenzyme Length = 449

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 382
           VAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+YN LK FMEMN
Sbjct: 342 VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMN 401
Query: 383 SRLFDELTANY 393
            +LFD+ T  +
Sbjct: 402 QKLFDDCTQQF 412

>pdb|2IAE|B Chain B, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 407

Iteration: 1
 Score =  294 bits (753), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 139/202 (68%), Positives = 159/202 (78%)
Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EH                 S+YH QLAYC
Sbjct: 182 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 241
Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ
Sbjct: 242 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 301
Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+
Sbjct: 302 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI 361
Query: 276 YNVLKTFMEMNSRLFDELTANY 297
           YN LK FMEMN +LFD+ T  +
Sbjct: 362 YNALKLFMEMNQKLFDDCTQQF 383

>pdb|2IAE|B Chain B, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 407

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 382
           VAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+YN LK FMEMN
Sbjct: 313 VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMN 372
Query: 383 SRLFDELTANY 393
            +LFD+ T  +
Sbjct: 373 QKLFDDCTQQF 383

>pdb|3FGA|B Chain B, Structural Basis Of Pp2a And Sgo Interaction Length = 403

Iteration: 1
 Score =  294 bits (752), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 139/202 (68%), Positives = 159/202 (78%)
Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EH                 S+YH QLAYC
Sbjct: 178 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 237
Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ
Sbjct: 238 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 297
Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+
Sbjct: 298 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLI 357
Query: 276 YNVLKTFMEMNSRLFDELTANY 297
           YN LK FMEMN +LFD+ T  +
Sbjct: 358 YNALKLFMEMNQKLFDDCTQQF 379

>pdb|3FGA|B Chain B, Structural Basis Of Pp2a And Sgo Interaction Length = 403

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 382
           VAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L+YN LK FMEMN
Sbjct: 309 VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMN 368
Query: 383 SRLFDELTANY 393
            +LFD+ T  +
Sbjct: 369 QKLFDDCTQQF 379

>pdb|2NYL|B Chain B, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 388

Iteration: 1
 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 156/204 (76%)
Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EH                 S+YH QLAYC
Sbjct: 174 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 233
Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV  LLKYWP+T S KEV FL E+EEILDVIEP++F+ I EPLFRQ
Sbjct: 234 VVQFLEKDSTLTEPVVXALLKYWPKTHSPKEVXFLNELEEILDVIEPSEFVKIXEPLFRQ 293
Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALV 275
           +AKCVSSPHFQVAERALY+WNNEYI SL+ +N   ++PI FP+LYR SK HWN+TI  L+
Sbjct: 294 LAKCVSSPHFQVAERALYYWNNEYIXSLISDNAAKILPIXFPSLYRNSKTHWNKTIHGLI 353
Query: 276 YNVLKTFMEMNSRLFDELTANYKA 299
           YN LK F E N +LFD+ T  +KA
Sbjct: 354 YNALKLFXEXNQKLFDDCTQQFKA 377

>pdb|2NYL|B Chain B, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 388

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 55/73 (75%)
Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 382
           VAERALY+WNNEYI SL+ +N   ++PI FP+LYR SK HWN+TI  L+YN LK F E N
Sbjct: 305 VAERALYYWNNEYIXSLISDNAAKILPIXFPSLYRNSKTHWNKTIHGLIYNALKLFXEXN 364
Query: 383 SRLFDELTANYKA 395
            +LFD+ T  +KA
Sbjct: 365 QKLFDDCTQQFKA 377

>pdb|2JAK|A Chain A, Human Pp2a Regulatory Subunit B56g Length = 392

Iteration: 1
 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/169 (71%), Positives = 135/169 (79%)
Query: 96  FVYETEHFNGVGELLEILGSIINGFALPLKNEHXXXXXXXXXXXXXXXXXSLYHAQLAYC 155
           F+YETEH NG+ ELLEILGSIINGFALPLK EH                 S+YH QLAYC
Sbjct: 223 FIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYC 282
Query: 156 VVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQ 215
           VVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ
Sbjct: 283 VVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQ 342
Query: 216 IAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISK 264
           +AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK
Sbjct: 343 LAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSK 391

>pdb|2JAK|A Chain A, Human Pp2a Regulatory Subunit B56g Length = 392

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISK 360
           VAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK
Sbjct: 354 VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSK 391

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	399
3fga_B	403	Serine/threonine-protein phosphatase 2A 56 kDa RE	3e-92
3fga_B	403	Serine/threonine-protein phosphatase 2A 56 kDa RE	3e-23
2npp_B	449	PP2A, B subunit, serine/threonine-protein phosphat	2e-91
2npp_B	449	PP2A, B subunit, serine/threonine-protein phosphat	5e-22
2jak_A	392	Serine/threonine-protein phosphatase 2A 56 kDa RE	2e-77
2jak_A	392	Serine/threonine-protein phosphatase 2A 56 kDa RE	9e-10

>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B* Length = 403

 Score =  282 bits (722), Expect = 3e-92
 Identities = 163/269 (60%), Positives = 194/269 (72%), Gaps = 7/269 (2%)

Query: 42  FSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSS--PFVKSD-----Q 94
           F   +       +F + L  L        R+ L   +      F     +++        
Sbjct: 117 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 176

Query: 95  EFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAY 154
            F+YETEH NG+ ELLEILGSIINGFALPLK EHK+FL+KVLLPLHKVK LS+YH QLAY
Sbjct: 177 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 236

Query: 155 CVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFR 214
           CVVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFR
Sbjct: 237 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 296

Query: 215 QIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVAL 274
           Q+AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L
Sbjct: 297 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 356

Query: 275 VYNVLKTFMEMNSRLFDELTANYKAERQN 303
           +YN LK FMEMN +LFD+ T  +KAE+  
Sbjct: 357 IYNALKLFMEMNQKLFDDCTQQFKAEKLK 385

>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B* Length = 403

 Score = 99.4 bits (247), Expect = 3e-23
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 19/235 (8%)

Query: 173 GLLKYWPRTCSQKEVMFLGE------IEEILDVIEP--TQFINIQEPLFRQIAKCVSSPH 224
           GL  Y  +  +     F+ E      I E+L+++      F    +   +     V  P 
Sbjct: 162 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 221

Query: 225 FQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFME 284
            +V   ++Y     Y +    E +  +   +  AL +   +  +   V  +  + +    
Sbjct: 222 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 281

Query: 285 MNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEENN 344
           +    F ++           P     +  ++ P     VAERALY+WNNEYIMSL+ +N 
Sbjct: 282 IEPSEFVKIM---------EPLFRQLAKCVSSP--HFQVAERALYYWNNEYIMSLISDNA 330

Query: 345 HVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK 399
             ++PIMFP+LYR SK HWN+TI  L+YN LK FMEMN +LFD+ T  +KAE+ K
Sbjct: 331 AKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLK 385

>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20 Length = 449

 Score =  281 bits (720), Expect = 2e-91
 Identities = 163/270 (60%), Positives = 191/270 (70%), Gaps = 7/270 (2%)

Query: 42  FSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFS-------SPFVKSDQ 94
           F   +       +F + L  L        R+ L   +      F                
Sbjct: 150 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209

Query: 95  EFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAY 154
            F+YETEH NG+ ELLEILGSIINGFALPLK EHK+FL+KVLLPLHKVK LS+YH QLAY
Sbjct: 210 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 269

Query: 155 CVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFR 214
           CVVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFR
Sbjct: 270 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 329

Query: 215 QIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVAL 274
           Q+AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK HWN+TI  L
Sbjct: 330 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 389

Query: 275 VYNVLKTFMEMNSRLFDELTANYKAERQNS 304
           +YN LK FMEMN +LFD+ T  +KAE+   
Sbjct: 390 IYNALKLFMEMNQKLFDDCTQQFKAEKLKE 419

>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20 Length = 449

 Score = 96.4 bits (239), Expect = 5e-22
 Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 23/237 (9%)

Query: 173 GLLKYWPRTCSQKEVMFLGE------IEEILDVIEP--TQFINIQEPLFRQIAKCVSSPH 224
           GL  Y  +  +     F+ E      I E+L+++      F    +   +     V  P 
Sbjct: 195 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 254

Query: 225 FQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLK--TF 282
            +V   ++Y     Y +    E +  +   +  AL +    +W +T      +  K   F
Sbjct: 255 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLK----YWPKT------HSPKEVMF 304

Query: 283 MEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNNEYIMSLMEE 342
           +     +  ++    +  +   P     +  ++ P     VAERALY+WNNEYIMSL+ +
Sbjct: 305 LNELEEIL-DVIEPSEFVKIMEPLFRQLAKCVSSP--HFQVAERALYYWNNEYIMSLISD 361

Query: 343 NNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQK 399
           N   ++PIMFP+LYR SK HWN+TI  L+YN LK FMEMN +LFD+ T  +KAE+ K
Sbjct: 362 NAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLK 418

>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20 Length = 392

 Score =  243 bits (622), Expect = 2e-77
 Identities = 141/230 (61%), Positives = 163/230 (70%), Gaps = 7/230 (3%)

Query: 42  FSFTLRTSGFMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFS-------SPFVKSDQ 94
           F   +       +F + L  L        R+ L   +      F                
Sbjct: 162 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 221

Query: 95  EFVYETEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAY 154
            F+YETEH NG+ ELLEILGSIINGFALPLK EHK+FL+KVLLPLHKVK LS+YH QLAY
Sbjct: 222 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 281

Query: 155 CVVQFLEKDPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFR 214
           CVVQFLEKD TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFR
Sbjct: 282 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 341

Query: 215 QIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISK 264
           Q+AKCVSSPHFQVAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK
Sbjct: 342 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSK 391

>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20 Length = 392

 Score = 59.0 bits (142), Expect = 9e-10
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 23/164 (14%)

Query: 197 LDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMF 256
           L        + +  PL +   K +S  H Q+A          Y +    E +  +   + 
Sbjct: 251 LKEEHKIFLLKVLLPLHK--VKSLSVYHPQLA----------YCVVQFLEKDSTLTEPVV 298

Query: 257 PALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAM 316
            AL +   +  +   V  +  + +    +    F ++           P     +  ++ 
Sbjct: 299 MALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIM---------EPLFRQLAKCVSS 349

Query: 317 PRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISK 360
           P     VAERALY+WNNEYIMSL+ +N   ++PIMFP+LYR SK
Sbjct: 350 P--HFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSK 391

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	399
3fga_B	403	Serine/threonine-protein phosphatase 2A 56 kDa RE	100.0
2npp_B	449	PP2A, B subunit, serine/threonine-protein phosphat	100.0
2jak_A	392	Serine/threonine-protein phosphatase 2A 56 kDa RE	100.0
3fga_B	403	Serine/threonine-protein phosphatase 2A 56 kDa RE	100.0
2npp_B	449	PP2A, B subunit, serine/threonine-protein phosphat	100.0
2jak_A	392	Serine/threonine-protein phosphatase 2A 56 kDa RE	99.88
1ibr_B	462	P95, importin beta-1 subunit, nuclear factor; smal	93.2
4fdd_A	852	Transportin-1; heat repeats, karyopherin, nuclear	91.91
2bpt_A	861	Importin beta-1 subunit; nuclear transport, nucleo	91.51
2qk1_A	249	Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h	80.56
1qgr_A	876	Protein (importin beta subunit); transport recepto	80.53

>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*

Probab=100.00  E-value=4.1e-76  Score=596.50  Aligned_cols=276  Identities=60%  Similarity=0.981  Sum_probs=256.3

Q ss_pred             cceeeeeehhcccCCCcccc-----hhhHH-HHhhhhcc---ccHHHHHHHHHHHhccCC--Cccc-----cccccceec
Q psy1352          36 SIRVTTFSFTLRTSGFMNQF-----RIDLA-HLLRHFLR---DSRNLLVDFIWACSNSFS--SPFV-----KSDQEFVYE   99 (399)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~-----~id~~-~l~~~~~s---d~R~li~~~~~~~~~~~~--~~f~-----~~~~~fiye   99 (399)
                      +++-++|.-|+..+.|+++.     +-+++ +|++.|.|   +||+.+..++..+++||.  |.|+     .++++||||
T Consensus       102 qlVYe~llrfi~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDprER~~LktiLhrIY~kf~~~R~~Irk~innif~~fiye  181 (403)
T 3fga_B          102 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYE  181 (403)
T ss_dssp             HHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhccccChhhHHhhcCHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhcC
Confidence            45677888888888888763     44445 99999998   666799999998888883  3333     456999999


Q ss_pred             cCCccCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcCCCChHHHHHHhhccCC
Q psy1352         100 TEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWP  179 (399)
Q Consensus       100 ~~~~~GI~ELLeilgsIInGfa~PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kdp~L~~~vi~~LLk~WP  179 (399)
                      +++||||+|||||+||||||||+|||+||++||.+||+||||+++++.||+||+||++||++|||+|++++++||+||||
T Consensus       182 ~e~~~GIaeLLeilgsIinGfa~PLkeehk~fl~~vLlPLHk~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP  261 (403)
T 3fga_B          182 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWP  261 (403)
T ss_dssp             TCCCTTHHHHHHHHHHHHHHCCSSCCHHHHHHHHHTTTGGGGSTTGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCC
T ss_pred             cccCCCHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHhCchhHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHhHHHHHHHHHHhccChhhHHhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHHH
Q psy1352         180 RTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPAL  259 (399)
Q Consensus       180 ~tns~KEvlFL~ELeeILe~i~~~eF~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~L  259 (399)
                      +|||+|||+||+|+++||+.++|++|.+++.|||++||+|++|+|+|||||||++|+|+++++++++|++.++|+++|+|
T Consensus       262 ~tns~KevlFL~Ele~iLe~~~~~~f~~i~~~lf~~la~ci~S~hfqVAErAL~~wnNe~i~~li~~n~~~IlPii~p~L  341 (403)
T 3fga_B          262 KTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL  341 (403)
T ss_dssp             SSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhccHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHhhhhCCCCccccc
Q psy1352         260 YRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFS  311 (399)
Q Consensus       260 ~~~s~~HWn~tV~~la~nvLk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~~  311 (399)
                      ++++++|||++|+++|.||+|++||||+++|++|+++|++++++++.+...|
T Consensus       342 ~~~~~~HWn~~v~~l~~~vlk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~r  393 (403)
T 3fga_B          342 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKER  393 (403)
T ss_dssp             HHTTSCCSCHHHHHHHHHHHHHHHTTSCCCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988776555444

>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20

Probab=100.00  E-value=2.9e-74  Score=590.67  Aligned_cols=276  Identities=60%  Similarity=0.965  Sum_probs=255.8

Q ss_pred             cceeeeeehhcccCCCcccc-----hhhHH-HHhhhhcc---ccHHHHHHHHHHHhccCCCccc-------cccccceec
Q psy1352          36 SIRVTTFSFTLRTSGFMNQF-----RIDLA-HLLRHFLR---DSRNLLVDFIWACSNSFSSPFV-------KSDQEFVYE   99 (399)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~-----~id~~-~l~~~~~s---d~R~li~~~~~~~~~~~~~~f~-------~~~~~fiye   99 (399)
                      +++-++|--|+..+.|.++.     +-+++ +|++.|.|   +||+.+..++..+++||...+.       .++++||||
T Consensus       135 qlVYe~llrfv~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDpRERd~LktiLhrIY~Kf~~~R~~Irk~i~nif~~fi~e  214 (449)
T 2npp_B          135 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYE  214 (449)
T ss_dssp             HHHHHHHHHHHTSTTCCSTTGGGTSCHHHHHHHHHTTTSSTHHHHHHHHHHHHHHHHSCTTTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHccCCChhhhhhhCCHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            56778888899988887663     44555 99999998   6667999999999998855542       345999999


Q ss_pred             cCCccCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcCCCChHHHHHHhhccCC
Q psy1352         100 TEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWP  179 (399)
Q Consensus       100 ~~~~~GI~ELLeilgsIInGfa~PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kdp~L~~~vi~~LLk~WP  179 (399)
                      +++||||+|||||+||||||||+|||+||++|+.+||+|||++++++.||+||+||++||++|||+|++++++||+||||
T Consensus       215 ~e~~nGIaeLLeilgSIinGfa~PLKeehk~fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP  294 (449)
T 2npp_B          215 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWP  294 (449)
T ss_dssp             CSCCSCHHHHHHHHHHHHSSCCSSCCHHHHHHHHHTTGGGGGSSCGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCC
T ss_pred             cCCCCCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHccchhHHhHHHHHHHHHHHHhcCcHhHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHhHHHHHHHHHHhccChhhHHhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHHH
Q psy1352         180 RTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPAL  259 (399)
Q Consensus       180 ~tns~KEvlFL~ELeeILe~i~~~eF~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~L  259 (399)
                      +|||+|||+||+||++||+.++|++|.+++.|||++||+|++|+|+|||||||++|+|+++++++++|++.++|+++|+|
T Consensus       295 ~tns~KevlFL~eleeile~~~~~ef~~i~~~lF~~la~ci~S~hfqVAErAL~~w~N~~i~~li~~n~~~IlPii~p~L  374 (449)
T 2npp_B          295 KTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL  374 (449)
T ss_dssp             SSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHCCHHHHHHHHhchhhhHHhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHhhhhCCCCccccc
Q psy1352         260 YRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFS  311 (399)
Q Consensus       260 ~~~s~~HWn~tV~~la~nvLk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~~  311 (399)
                      ++++++|||++|+++|.+|++++||||+++|++|+++|++++++++.+...|
T Consensus       375 ~~~s~~HWn~~V~~la~~vlk~l~e~d~~lf~~c~~~~~~~~~~~~~~~~~r  426 (449)
T 2npp_B          375 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKER  426 (449)
T ss_dssp             TSCTTCCSSTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCC-
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998877665444343

>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20

Probab=100.00  E-value=1e-63  Score=504.39  Aligned_cols=230  Identities=62%  Similarity=0.996  Sum_probs=207.9

Q ss_pred             cceeeeeehhcccCCCccc-----chhhHH-HHhhhhcc---ccHHHHHHHHHHHhccCCCccc-------cccccceec
Q psy1352          36 SIRVTTFSFTLRTSGFMNQ-----FRIDLA-HLLRHFLR---DSRNLLVDFIWACSNSFSSPFV-------KSDQEFVYE   99 (399)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~-----~~id~~-~l~~~~~s---d~R~li~~~~~~~~~~~~~~f~-------~~~~~fiye   99 (399)
                      +++-++|--|+..+.|.++     ++.+++ +|++.|.|   +||+.+..++..+++||...+.       .++++||||
T Consensus       147 qlVYe~llrfv~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDpRERd~LktiLhrIY~Kf~~~R~~Irk~i~nif~~fiye  226 (392)
T 2jak_A          147 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYE  226 (392)
T ss_dssp             HHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHccCCChhhhhhhCCHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            5677788889998888765     355556 99999998   6667999999999988855442       445999999


Q ss_pred             cCCccCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcCCCChHHHHHHhhccCC
Q psy1352         100 TEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWP  179 (399)
Q Consensus       100 ~~~~~GI~ELLeilgsIInGfa~PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kdp~L~~~vi~~LLk~WP  179 (399)
                      +++||||+|||||+||||||||+|||+||++|+.+||+||||+++++.||+||+||++||++|||+|++++++||+||||
T Consensus       227 ~e~~~GIaeLLeilgsIIngfa~PLKeehk~Fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP  306 (392)
T 2jak_A          227 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWP  306 (392)
T ss_dssp             SCCCSCHHHHHHHHHHHHHTCCSSCCHHHHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSC
T ss_pred             cCCCCCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhHhhccCCcHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHhHHHHHHHHHHhccChhhHHhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHHH
Q psy1352         180 RTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPAL  259 (399)
Q Consensus       180 ~tns~KEvlFL~ELeeILe~i~~~eF~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~L  259 (399)
                      +|||+|||+||+|+++||+.+++++|.+++.|||++||+|++|+|+|||||||++|+|+++++++++|++.++|+++|+|
T Consensus       307 ~tns~KevlFL~eleeiLe~~~~~~f~~i~~~lF~~la~ci~S~hfqVAErAL~~wnNe~i~~li~~n~~~ilPii~~~L  386 (392)
T 2jak_A          307 KTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL  386 (392)
T ss_dssp             SSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHGGGGCHHHHHHHHHTHHHHTTTSCC--
T ss_pred             CCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHhCcHHHHHHHHhhhccchhhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhc
Q psy1352         260 YRISKE  265 (399)
Q Consensus       260 ~~~s~~  265 (399)
                      ++++++
T Consensus       387 ~~~s~~  392 (392)
T 2jak_A          387 YRNSKT  392 (392)
T ss_dssp             ------
T ss_pred             HHHhcC
Confidence            999864

>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*

Probab=100.00  E-value=3e-38  Score=319.82  Aligned_cols=181  Identities=39%  Similarity=0.721  Sum_probs=159.0

Q ss_pred             HHHHHHHHhcc----------ChhhH-HhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHH
Q psy1352         190 LGEIEEILDVI----------EPTQF-INIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPA  258 (399)
Q Consensus       190 L~ELeeILe~i----------~~~eF-~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~  258 (399)
                      +.|+.||++++          ++..| .+++.|||+  ++|++.+|.|+++         ++++++++++....+++-+.
T Consensus       188 IaeLLeilgsIinGfa~PLkeehk~fl~~vLlPLHk--~~~~~~y~~qL~y---------cv~qf~eKDp~L~~~vi~~L  256 (403)
T 3fga_B          188 IAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHK--VKSLSVYHPQLAY---------CVVQFLEKDSTLTEPVVMAL  256 (403)
T ss_dssp             HHHHHHHHHHHHHHCCSSCCHHHHHHHHHTTTGGGG--STTGGGTHHHHHH---------HHHHHHHHCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHHc--CCcchhhHHHHHH---------HHHHHHHhCchhHHHHHHHH
Confidence            46888888765          23444 789999999  9999999999998         78999999999998887775


Q ss_pred             HHHhhhcCCcH---HHHHHHHHHHHHHHH-hcHHHHHHHHHHHHhhhhCCCCccccc-ccccCCCchhHhhhHhhhccch
Q psy1352         259 LYRISKEHWNQ---TIVALVYNVLKTFME-MNSRLFDELTANYKAERQNSPFGHAFS-TSLAMPRDELAVAERALYFWNN  333 (399)
Q Consensus       259 L~~~s~~HWn~---tV~~la~nvLk~l~e-~d~~lF~~~~~~~~~~~~~~~~~~~~~-~~~ci~s~hfQVAEraL~~wnN  333 (399)
                      | +    |||.   ..+.+..+.+..+++ ++|.-|.++..            +.|+ +++|++|+|||||||||++|||
T Consensus       257 L-k----~WP~tns~KevlFL~Ele~iLe~~~~~~f~~i~~------------~lf~~la~ci~S~hfqVAErAL~~wnN  319 (403)
T 3fga_B          257 L-K----YWPKTHSPKEVMFLNELEEILDVIEPSEFVKIME------------PLFRQLAKCVSSPHFQVAERALYYWNN  319 (403)
T ss_dssp             H-H----TCCSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHH------------HHHHHHHHHHTCSCHHHHHHHHGGGGC
T ss_pred             H-H----hCCCCCcHHHHHHHHHHHHHHHhCCHHHHHHHHH------------HHHHHHHHHHCCCCHHHHHHHHHHhcc
Confidence            5 5    9995   477778888877776 55666666653            4564 8999999999999999999999


Q ss_pred             hHHHHHhhhccccccccccHHHHhhhhcchhHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc
Q psy1352         334 EYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQ  398 (399)
Q Consensus       334 e~i~~li~~n~~~i~Pii~~~L~~~s~~HWn~~i~~l~~~vlk~~~e~d~~lf~~~~~~~~~~~~  398 (399)
                      +++++++++|+++|+|+|+|+|++++++|||++|+++|+||||+||||||++||+|+++|+++++
T Consensus       320 e~i~~li~~n~~~IlPii~p~L~~~~~~HWn~~v~~l~~~vlk~l~e~d~~lF~~~~~~~~~~~~  384 (403)
T 3fga_B          320 EYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKL  384 (403)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHTTSCCCCCTTHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999865

>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20

Probab=100.00  E-value=1.1e-36  Score=312.44  Aligned_cols=181  Identities=39%  Similarity=0.721  Sum_probs=158.5

Q ss_pred             HHHHHHHHhcc----------ChhhH-HhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHH
Q psy1352         190 LGEIEEILDVI----------EPTQF-INIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPA  258 (399)
Q Consensus       190 L~ELeeILe~i----------~~~eF-~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~  258 (399)
                      +.|+.||++++          ++..| .+++.|||+  ++|++.+|.|+++         ++++++++++....+++-+.
T Consensus       221 IaeLLeilgSIinGfa~PLKeehk~fl~~vLlPLhk--~~~l~~y~~qL~y---------cv~qf~eKDp~L~~~vi~~L  289 (449)
T 2npp_B          221 IAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHK--VKSLSVYHPQLAY---------CVVQFLEKDSTLTEPVVMAL  289 (449)
T ss_dssp             HHHHHHHHHHHHSSCCSSCCHHHHHHHHHTTGGGGG--SSCGGGTHHHHHH---------HHHHHHHHCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHc--cchhHHhHHHHHH---------HHHHHHhcCcHhHHHHHHHH
Confidence            46888888765          12344 789999999  9999999999998         78899999999998877775


Q ss_pred             HHHhhhcCCcH---HHHHHHHHHHHHHHH-hcHHHHHHHHHHHHhhhhCCCCccccc-ccccCCCchhHhhhHhhhccch
Q psy1352         259 LYRISKEHWNQ---TIVALVYNVLKTFME-MNSRLFDELTANYKAERQNSPFGHAFS-TSLAMPRDELAVAERALYFWNN  333 (399)
Q Consensus       259 L~~~s~~HWn~---tV~~la~nvLk~l~e-~d~~lF~~~~~~~~~~~~~~~~~~~~~-~~~ci~s~hfQVAEraL~~wnN  333 (399)
                      | +    |||.   ..+.+..+.+..+++ ++|.-|.++..            +.|+ +++|++|+|||||||||++|||
T Consensus       290 L-k----~WP~tns~KevlFL~eleeile~~~~~ef~~i~~------------~lF~~la~ci~S~hfqVAErAL~~w~N  352 (449)
T 2npp_B          290 L-K----YWPKTHSPKEVMFLNELEEILDVIEPSEFVKIME------------PLFRQLAKCVSSPHFQVAERALYYWNN  352 (449)
T ss_dssp             H-H----TCCSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHH------------HHHHHHHHHHTCSCHHHHHHHHGGGGC
T ss_pred             H-H----hCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHH------------HHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence            4 5    9995   477788888888777 66667766653            4565 8999999999999999999999


Q ss_pred             hHHHHHhhhccccccccccHHHHhhhhcchhHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc
Q psy1352         334 EYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQ  398 (399)
Q Consensus       334 e~i~~li~~n~~~i~Pii~~~L~~~s~~HWn~~i~~l~~~vlk~~~e~d~~lf~~~~~~~~~~~~  398 (399)
                      ++|++++++|+++|+|+++|+|++++++|||++|+++|+||+|+||||||++|++|+++|+++++
T Consensus       353 ~~i~~li~~n~~~IlPii~p~L~~~s~~HWn~~V~~la~~vlk~l~e~d~~lf~~c~~~~~~~~~  417 (449)
T 2npp_B          353 EYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKL  417 (449)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHTSCTTCCSSTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhchhhhHHhhHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999998754

>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20

Probab=99.88  E-value=9.3e-25  Score=220.55  Aligned_cols=144  Identities=35%  Similarity=0.641  Sum_probs=114.2

Q ss_pred             HHHHHHHHhcc----------ChhhH-HhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHH
Q psy1352         190 LGEIEEILDVI----------EPTQF-INIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPA  258 (399)
Q Consensus       190 L~ELeeILe~i----------~~~eF-~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~  258 (399)
                      +.|+.||++++          ++..| .+++.|||+  ++|++.+|.|+++         ++++++++++....+++-+.
T Consensus       233 IaeLLeilgsIIngfa~PLKeehk~Fl~~vLlPLhk--~~~l~~y~~qL~y---------cv~qf~eKDp~L~~~vi~~L  301 (392)
T 2jak_A          233 IAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHK--VKSLSVYHPQLAY---------CVVQFLEKDSTLTEPVVMAL  301 (392)
T ss_dssp             HHHHHHHHHHHHHTCCSSCCHHHHHHHHHTTGGGGT--SGGGGGTHHHHHH---------HHHHHHHHCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcHHHHHHHHHHhHhhcc--CCcHHHhHHHHHH---------HHHHHHhcCchhHHHHHHHH
Confidence            46888888755          23344 789999999  9999999999998         78899999999998877775


Q ss_pred             HHHhhhcCCcHH---HHHHHHHHHHHHHH-hcHHHHHHHHHHHHhhhhCCCCccccc-ccccCCCchhHhhhHhhhccch
Q psy1352         259 LYRISKEHWNQT---IVALVYNVLKTFME-MNSRLFDELTANYKAERQNSPFGHAFS-TSLAMPRDELAVAERALYFWNN  333 (399)
Q Consensus       259 L~~~s~~HWn~t---V~~la~nvLk~l~e-~d~~lF~~~~~~~~~~~~~~~~~~~~~-~~~ci~s~hfQVAEraL~~wnN  333 (399)
                      | +    |||.+   .+.+..+.+..+++ +++.-|.++.            .+.|+ +++|++|+|||||||||++|||
T Consensus       302 L-k----~WP~tns~KevlFL~eleeiLe~~~~~~f~~i~------------~~lF~~la~ci~S~hfqVAErAL~~wnN  364 (392)
T 2jak_A          302 L-K----YWPKTHSPKEVMFLNELEEILDVIEPSEFVKIM------------EPLFRQLAKCVSSPHFQVAERALYYWNN  364 (392)
T ss_dssp             H-H----SSCSSCCTTHHHHHHHHHHHHHTCCHHHHHHHH------------HHHHHHHHHHHTCSSHHHHHHHHGGGGC
T ss_pred             H-H----hCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHH------------HHHHHHHHHHHcCCcHHHHHHHHHHhCc
Confidence            4 5    99964   67777888877777 5566666665            34565 8999999999999999999999


Q ss_pred             hHHHHHhhhccccccccccHHHHhhhhc
Q psy1352         334 EYIMSLMEENNHVVMPIMFPALYRISKE  361 (399)
Q Consensus       334 e~i~~li~~n~~~i~Pii~~~L~~~s~~  361 (399)
                      |++++++++|+++|+|+|||+||+++++
T Consensus       365 e~i~~li~~n~~~ilPii~~~L~~~s~~  392 (392)
T 2jak_A          365 EYIMSLISDNAAKILPIMFPSLYRNSKT  392 (392)
T ss_dssp             HHHHHHHHHTHHHHTTTSCC--------
T ss_pred             HHHHHHHHhhhccchhhhhHHHHHHhcC
Confidence            9999999999999999999999999974

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A

Probab=93.20  E-value=0.63  Score=45.03  Aligned_cols=156  Identities=12%  Similarity=0.130  Sum_probs=95.6

Q ss_pred             CChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcC------CCChHHHHHHhhccCCCC--CchhHhHHHHHHH
Q psy1352         123 PLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKD------PTLTEPVVKGLLKYWPRT--CSQKEVMFLGEIE  194 (399)
Q Consensus       123 PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kd------p~L~~~vi~~LLk~WP~t--ns~KEvlFL~ELe  194 (399)
                      .+.++.+..++..|+++.....-..  .++..|+..+...+      |.+.+.++..+-    ..  +......-+.-+.
T Consensus        82 ~l~~~~~~~ik~~ll~~l~~~~~~v--~~~~~~i~~ia~~~~~~~~w~~ll~~L~~~l~----~~~~~~~~r~~al~~l~  155 (462)
T 1ibr_B           82 AIDANARREVKNYVLQTLGTETYRP--SSASQCVAGIACAEIPVNQWPELIPQLVANVT----NPNSTEHMKESTLEAIG  155 (462)
T ss_dssp             TSCHHHHHHHHHHHHHHTTCCCSSS--CSHHHHHHHHHHHHGGGTCCTTHHHHHHHHHH----CTTCCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHhCCCCchh--hHHHHHHHHHHHHhccccccHHHHHHHHHHhc----cCCCCHHHHHHHHHHHH
Confidence            3667888889999999888766544  78999988876543      444444444432    22  3344445666677


Q ss_pred             HHHhccChhhHHhhHHHHHHHhhhhhCCC--cHHHHHHHHHhhcchhhHHHhhhccc--cchhcchHHHHHhhhcCCcHH
Q psy1352         195 EILDVIEPTQFINIQEPLFRQIAKCVSSP--HFQVAERALYFWNNEYIMSLMEENNH--VVMPIMFPALYRISKEHWNQT  270 (399)
Q Consensus       195 eILe~i~~~eF~kv~~pLfk~lakCi~S~--HfQVAErAL~~w~Ne~i~~lI~~n~~--~i~PiI~~~L~~~s~~HWn~t  270 (399)
                      .+.+...++.+.....+++..+.+++.+.  +..|-..|+..+.+  ++.++..+..  ...+.+.+.|.+..... +..
T Consensus       156 ~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~  232 (462)
T 1ibr_B          156 YICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLN--SLEFTKANFDKESERHFIMQVVCEATQCP-DTR  232 (462)
T ss_dssp             HHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHH--HTTTTHHHHTSHHHHHHHHHHHHHHTTCS-SHH
T ss_pred             HHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH--HHHHHHHhhhhhHHHHHHHHHHHHhcCCC-CHH
Confidence            77776656666677778888888999888  78887777765543  1222222111  01122344444333322 346


Q ss_pred             HHHHHHHHHHHHHHhcH
Q psy1352         271 IVALVYNVLKTFMEMNS  287 (399)
Q Consensus       271 V~~la~nvLk~l~e~d~  287 (399)
                      ++..+..++..+.+..+
T Consensus       233 vr~~~~~~l~~l~~~~~  249 (462)
T 1ibr_B          233 VRVAALQNLVKIMSLYY  249 (462)
T ss_dssp             HHHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77777777777665444

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*

Probab=91.91  E-value=0.79  Score=49.23  Aligned_cols=201  Identities=11%  Similarity=0.070  Sum_probs=116.3

Q ss_pred             HHHHhcCCCCChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcC-----CCChHHHHHHhhccCCCCCchhHhH
Q psy1352         114 GSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKD-----PTLTEPVVKGLLKYWPRTCSQKEVM  188 (399)
Q Consensus       114 gsIInGfa~PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kd-----p~L~~~vi~~LLk~WP~tns~KEvl  188 (399)
                      ...++..-.++.++.+..++..++++...+. ..--.++..|+......|     |.+.+.++..+    -..+..-.-.
T Consensus        73 kn~i~~~w~~~~~~~~~~ik~~ll~~l~~~~-~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l----~~~~~~~r~~  147 (852)
T 4fdd_A           73 KNNVKAHFQNFPNGVTDFIKSECLNNIGDSS-PLIRATVGILITTIASKGELQNWPDLLPKLCSLL----DSEDYNTCEG  147 (852)
T ss_dssp             HHHTTTSGGGCCHHHHHHHHHHHHTTTTCSS-HHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHH----SCSSHHHHHH
T ss_pred             HHHHHHccCCCCHHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHH----cCCCHHHHHH
Confidence            3444433345778899999999999877554 345778999999888765     34444443333    2233333334


Q ss_pred             HHHHHHHHHhccChh----hHHhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHHHHHhhh
Q psy1352         189 FLGEIEEILDVIEPT----QFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISK  264 (399)
Q Consensus       189 FL~ELeeILe~i~~~----eF~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~L~~~s~  264 (399)
                      -+.-+..+++..++.    ........+...+.+++.+++..|-..|+....+  ++....+.-...++.+++.|.+...
T Consensus       148 al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~--~~~~~~~~~~~~~~~~l~~l~~~~~  225 (852)
T 4fdd_A          148 AFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQ--FIISRTQALMLHIDSFIENLFALAG  225 (852)
T ss_dssp             HHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHT--TTTTTCHHHHTSHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHH--HHhcccHHHHHHHHHHHHHHHHHcC
Confidence            455555666555432    1112245556666778889999998888776542  2211111111223445555655443


Q ss_pred             cCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHhhhhCCCCcccccccccCCCchhHhhhHhhhccch
Q psy1352         265 EHWNQTIVALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFSTSLAMPRDELAVAERALYFWNN  333 (399)
Q Consensus       265 ~HWn~tV~~la~nvLk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~~~~~ci~s~hfQVAEraL~~wnN  333 (399)
                      .- +..||..+..++..+.+..++.+....+..-           .-.-.++.+..-.|+..|+.+|.+
T Consensus       226 d~-~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~-----------~~l~~~~~~~~~~vr~~a~e~l~~  282 (852)
T 4fdd_A          226 DE-EPEVRKNVCRALVMLLEVRMDRLLPHMHNIV-----------EYMLQRTQDQDENVALEACEFWLT  282 (852)
T ss_dssp             CC-CHHHHHHHHHHHHHHHHHCHHHHGGGHHHHH-----------HHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH-----------HHHHHHccCCcHHHHHHHHHHHHH
Confidence            32 4578999999999988877755433221100           001123344556788888888864

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A

Probab=91.51  E-value=2.8  Score=44.13  Aligned_cols=195  Identities=12%  Similarity=0.104  Sum_probs=111.8

Q ss_pred             ChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcC-CC-ChHHHHHHhhccCCCC-CchhHhHHHHHHHHHHhcc
Q psy1352         124 LKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKD-PT-LTEPVVKGLLKYWPRT-CSQKEVMFLGEIEEILDVI  200 (399)
Q Consensus       124 LkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kd-p~-L~~~vi~~LLk~WP~t-ns~KEvlFL~ELeeILe~i  200 (399)
                      +.++.+..++..|+.......-.. -.++..++......+ |. --+.++..|+..--.. +..-....+.-+..+++.+
T Consensus        88 l~~~~~~~ik~~ll~~l~~~~~~v-r~~~~~~l~~i~~~~~p~~~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~  166 (861)
T 2bpt_A           88 VSPEAKNQIKTNALTALVSIEPRI-ANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESA  166 (861)
T ss_dssp             SCHHHHHHHHHHHHHHHTCSSHHH-HHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHHHHHHCCCchHH-HHHHHHHHHHHHHhhCcccccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcC
Confidence            457788888888888877765333 778888888776654 31 1223333333222222 3333334455666666665


Q ss_pred             Chhh--HHhhHHHHHHHhhhhhCCC--cHHHHHHHHHhhcchhhHHHhhhccc--cchhcchHHHHHhhhcCCcHHHHHH
Q psy1352         201 EPTQ--FINIQEPLFRQIAKCVSSP--HFQVAERALYFWNNEYIMSLMEENNH--VVMPIMFPALYRISKEHWNQTIVAL  274 (399)
Q Consensus       201 ~~~e--F~kv~~pLfk~lakCi~S~--HfQVAErAL~~w~Ne~i~~lI~~n~~--~i~PiI~~~L~~~s~~HWn~tV~~l  274 (399)
                      .++.  +.....+++..+..++.++  +..|-..|+..+.+  ++.++..+..  ...+.+.+.|.+.. .+-+..++..
T Consensus       167 ~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~--~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~~~~r~~  243 (861)
T 2bpt_A          167 DPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALAD--SLIFIKNNMEREGERNYLMQVVCEAT-QAEDIEVQAA  243 (861)
T ss_dssp             STTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHH--HGGGCHHHHTSHHHHHHHHHHHHHHH-TCSCHHHHHH
T ss_pred             ChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH--HHHHHHHHccChhHHHHHHHHHHHHh-cCCCHHHHHH
Confidence            5442  4566677777778888887  88888888776543  2222222110  00123344443322 3456678888


Q ss_pred             HHHHHHHHHHhcHHHHHHHHHHHHhhhhCCCCccccc-ccccCCCchhHhhhHhhhccch
Q psy1352         275 VYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFS-TSLAMPRDELAVAERALYFWNN  333 (399)
Q Consensus       275 a~nvLk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~~-~~~ci~s~hfQVAEraL~~wnN  333 (399)
                      +..++..+.+..++.+......           .... ...++.+.+..|+..|+.+|.+
T Consensus       244 a~~~l~~l~~~~~~~~~~~l~~-----------~l~~~~~~~~~~~~~~vr~~a~~~l~~  292 (861)
T 2bpt_A          244 AFGCLCKIMSKYYTFMKPYMEQ-----------ALYALTIATMKSPNDKVASMTVEFWST  292 (861)
T ss_dssp             HHHHHHHHHHHHGGGCHHHHHH-----------THHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence            8888888877665444332220           0111 2224556678999999999963

>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}

Probab=80.56  E-value=28  Score=31.86  Aligned_cols=134  Identities=10%  Similarity=0.068  Sum_probs=100.0

Q ss_pred             CccCHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcC-CC----ChHHHHHHhh
Q psy1352         102 HFNGVGELLEILGSIINGFA-LPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKD-PT----LTEPVVKGLL  175 (399)
Q Consensus       102 ~~~GI~ELLeilgsIInGfa-~PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kd-p~----L~~~vi~~LL  175 (399)
                      +..-+...+..+|.+.+|+. ......|..-+.-.++..++.+.-. =-....+++..+++.- |.    -.+.++..|+
T Consensus        74 n~~v~~~A~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~-V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~  152 (249)
T 2qk1_A           74 NIQAVALAAQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPS-VIEAIRKALLTICKYYDPLASSGRNEDMLKDIL  152 (249)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHH-HHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHccccccCCcHHHHHHHHH
Confidence            33456778999999999987 5553255555666777777776633 3567889999999854 22    2346777777


Q ss_pred             ccCCCCCchhHhHHHHHHHHHHhccCh--hhHHhhH-HHHHHHhhhhhCCCcHHHHHHHHHhhc
Q psy1352         176 KYWPRTCSQKEVMFLGEIEEILDVIEP--TQFINIQ-EPLFRQIAKCVSSPHFQVAERALYFWN  236 (399)
Q Consensus       176 k~WP~tns~KEvlFL~ELeeILe~i~~--~eF~kv~-~pLfk~lakCi~S~HfQVAErAL~~w~  236 (399)
                      ..+-..+++=....+.-|..++...+.  +.|.+.+ .++...+.+|+......|-+.|...+.
T Consensus       153 ~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~  216 (249)
T 2qk1_A          153 EHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFA  216 (249)
T ss_dssp             HHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred             HHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            777666777777888888888887653  7788888 889999999999999999988877555

>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A

Probab=80.53  E-value=8  Score=40.71  Aligned_cols=157  Identities=12%  Similarity=0.113  Sum_probs=93.1

Q ss_pred             ChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHc------CCCChHHHHHHhhccCCCC--CchhHhHHHHHHHH
Q psy1352         124 LKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEK------DPTLTEPVVKGLLKYWPRT--CSQKEVMFLGEIEE  195 (399)
Q Consensus       124 LkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~K------dp~L~~~vi~~LLk~WP~t--ns~KEvlFL~ELee  195 (399)
                      +.++.+..++..++.......-..  .++..|+..+...      .|.+.+.++..+-    ..  +..-...-+.-+..
T Consensus        83 l~~~~~~~ik~~ll~~l~~~~~~~--~~~~~~l~~i~~~~~~~~~w~~ll~~l~~~l~----~~~~~~~~r~~al~~l~~  156 (876)
T 1qgr_A           83 IDANARREVKNYVLHTLGTETYRP--SSASQCVAGIACAEIPVNQWPELIPQLVANVT----NPNSTEHMKESTLEAIGY  156 (876)
T ss_dssp             SCHHHHHHHHHHHHHHTTTCCSSS--CHHHHHHHHHHHHHGGGTCCTTHHHHHHHHHH----CTTCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHHHhhCcccccHHHHHHHHHHHh----CCCCCHHHHHHHHHHHHH
Confidence            557778888888888776655443  6777777766543      3444444444332    12  33333456677777


Q ss_pred             HHhccChhhHHhhHHHHHHHhhhhhCCC--cHHHHHHHHHhhcchhhHHHhhhccc--cchhcchHHHHHhhhcCCcHHH
Q psy1352         196 ILDVIEPTQFINIQEPLFRQIAKCVSSP--HFQVAERALYFWNNEYIMSLMEENNH--VVMPIMFPALYRISKEHWNQTI  271 (399)
Q Consensus       196 ILe~i~~~eF~kv~~pLfk~lakCi~S~--HfQVAErAL~~w~Ne~i~~lI~~n~~--~i~PiI~~~L~~~s~~HWn~tV  271 (399)
                      +++.+.++.+......+...+.+++.++  +..|-..|+..+.+  ++..+..+..  ...+.+.+.+.+..... +..+
T Consensus       157 l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~--~~~~~~~~~~~~~~~~~il~~l~~~~~~~-~~~v  233 (876)
T 1qgr_A          157 ICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLN--SLEFTKANFDKESERHFIMQVVCEATQCP-DTRV  233 (876)
T ss_dssp             HHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHH--HGGGCHHHHTSHHHHHHHHHHHHHHTTCS-SHHH
T ss_pred             HHHhcCHhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHHHHHHHHHcCCC-CHHH
Confidence            7777777777777788888888888887  67877777765543  2222222111  00012333333333222 3468


Q ss_pred             HHHHHHHHHHHHHhcHHH
Q psy1352         272 VALVYNVLKTFMEMNSRL  289 (399)
Q Consensus       272 ~~la~nvLk~l~e~d~~l  289 (399)
                      +..+..++..+.+..++.
T Consensus       234 r~~a~~~l~~l~~~~~~~  251 (876)
T 1qgr_A          234 RVAALQNLVKIMSLYYQY  251 (876)
T ss_dssp             HHHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhHHH
Confidence            888888888877755533

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	399
d2jaka1	343	a.118.1.20 (A:30-372) Serine/threonine-protein pho	1e-81
d2jaka1	343	a.118.1.20 (A:30-372) Serine/threonine-protein pho	4e-09

>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 343

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: B56-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  251 bits (643), Expect = 1e-81
 Identities = 135/214 (63%), Positives = 158/214 (73%), Gaps = 7/214 (3%)

Query: 51  FMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSS--PFVKSD-----QEFVYETEHF 103
              +F + L  L        R+ L   +      F     +++         F+YETEH 
Sbjct: 130 IDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHH 189

Query: 104 NGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKD 163
           NG+ ELLEILGSIINGFALPLK EHK+FL+KVLLPLHKVK LS+YH QLAYCVVQFLEKD
Sbjct: 190 NGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKD 249

Query: 164 PTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSP 223
            TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ+AKCVSSP
Sbjct: 250 STLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSP 309

Query: 224 HFQVAERALYFWNNEYIMSLMEENNHVVMPIMFP 257
           HFQVAERALY+WNNEYIMSL+ +N   ++PIMFP
Sbjct: 310 HFQVAERALYYWNNEYIMSLISDNAAKILPIMFP 343

>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 343

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: B56-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 22/31 (70%), Positives = 27/31 (87%)

Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFP 353
           VAERALY+WNNEYIMSL+ +N   ++PIMFP
Sbjct: 313 VAERALYYWNNEYIMSLISDNAAKILPIMFP 343

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	399
d2jaka1	343	Serine/threonine-protein phosphatase 2A regulatory	100.0
d2jaka1	343	Serine/threonine-protein phosphatase 2A regulatory	99.8
d1qgra_	876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	89.38

>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: B56-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-59  Score=464.81  Aligned_cols=222  Identities=62%  Similarity=1.004  Sum_probs=207.8

Q ss_pred             cceeeeeehhcccCCCcccc-----hhhHH-HHhhhhcc---ccHHHHHHHHHHHhccCCCcccccc-------ccceec
Q psy1352          36 SIRVTTFSFTLRTSGFMNQF-----RIDLA-HLLRHFLR---DSRNLLVDFIWACSNSFSSPFVKSD-------QEFVYE   99 (399)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~-----~id~~-~l~~~~~s---d~R~li~~~~~~~~~~~~~~f~~~~-------~~fiye   99 (399)
                      +++-++|..|+..+.|+++.     +-+.+ +|++.|.|   +||+.+..++..+++++...+.-++       ++||||
T Consensus       106 ~lVY~ill~f~~s~~~~~~~~~~~id~~Fi~~Ll~lf~S~D~rER~~lk~~l~~iy~kf~~~R~~Ir~~i~~if~~fi~e  185 (343)
T d2jaka1         106 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYE  185 (343)
T ss_dssp             HHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhccccCchhHHhhCCHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhc
Confidence            56668889999988887754     44555 99999998   6677999999999988865554443       999999


Q ss_pred             cCCccCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHcCCCChHHHHHHhhccCC
Q psy1352         100 TEHFNGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYWP  179 (399)
Q Consensus       100 ~~~~~GI~ELLeilgsIInGfa~PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kdp~L~~~vi~~LLk~WP  179 (399)
                      +++||||+|||||+|||||||++|||+||+.|+.++|+|||++++++.||+||+||+++|++|||+|+.++++||+||||
T Consensus       186 ~~~~~gI~elLeil~sii~gf~~plkeeh~~f~~~vllPLhk~~~~~~y~~qL~~~v~~f~~kDp~l~~~~i~~llk~WP  265 (343)
T d2jaka1         186 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWP  265 (343)
T ss_dssp             SCCCSCHHHHHHHHHHHHHTCCSSCCHHHHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSC
T ss_pred             CCCCccHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHhHHHHHHHHHHhccChhhHHhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchH
Q psy1352         180 RTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFP  257 (399)
Q Consensus       180 ~tns~KEvlFL~ELeeILe~i~~~eF~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~  257 (399)
                      +||++|||+||+|+++|++.++|++|.+++.|+|+++|+|++|+|+|||||||++|+|+++++++++|++.++|+++|
T Consensus       266 ~t~~~Kev~FL~el~~il~~~~~~~f~~~~~~lf~~la~ci~S~h~qVAErAl~~w~N~~~~~li~~n~~~i~Pii~P  343 (343)
T d2jaka1         266 KTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFP  343 (343)
T ss_dssp             SSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHGGGGCHHHHHHHHHTHHHHTTTSCC
T ss_pred             CCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHCCHHHHHHHHhCccceEeeeCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999987

>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: B56-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.8e-21  Score=191.67  Aligned_cols=189  Identities=28%  Similarity=0.434  Sum_probs=142.6

Q ss_pred             HHHHhhcccccccccchHHHHHHHHHHHHcCCCChHHHHHHhhccC----CCCCchhHhHHHHHHHHHHhcc------C-
Q psy1352         133 VKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDPTLTEPVVKGLLKYW----PRTCSQKEVMFLGEIEEILDVI------E-  201 (399)
Q Consensus       133 ~~vLlPLhk~~~l~~y~~qL~~cv~~fl~Kdp~L~~~vi~~LLk~W----P~tns~KEvlFL~ELeeILe~i------~-  201 (399)
                      ..-|+.|..++--.+ -++|-.++..+..|-+.+-..+.+.+-...    -.+...   --+.|+.+|++++      + 
T Consensus       135 i~~Ll~lf~S~D~rE-R~~lk~~l~~iy~kf~~~R~~Ir~~i~~if~~fi~e~~~~---~gI~elLeil~sii~gf~~pl  210 (343)
T d2jaka1         135 VLQLLELFDSEDPRE-RDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHH---NGIAELLEILGSIINGFALPL  210 (343)
T ss_dssp             HHHHHHHTTCSCHHH-HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHTSSCCC---SCHHHHHHHHHHHHHTCCSSC
T ss_pred             HHHHHHhcCCCChHH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCCCC---ccHHHHHHHHHHHHHhccCCc
Confidence            445566666665555 567777777777777777666555443222    222222   1246777777654      1 


Q ss_pred             ---hhh-HHhhHHHHHHHhhhhhCCCcHHHHHHHHHhhcchhhHHHhhhccccchhcchHHHHHhhhcCCcHH---HHHH
Q psy1352         202 ---PTQ-FINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQT---IVAL  274 (399)
Q Consensus       202 ---~~e-F~kv~~pLfk~lakCi~S~HfQVAErAL~~w~Ne~i~~lI~~n~~~i~PiI~~~L~~~s~~HWn~t---V~~l  274 (399)
                         +.. +.+++.|||+  ++|+..+|.|+++         ++++++++++..+.+++-+.| +    |||.|   .+.+
T Consensus       211 keeh~~f~~~vllPLhk--~~~~~~y~~qL~~---------~v~~f~~kDp~l~~~~i~~ll-k----~WP~t~~~Kev~  274 (343)
T d2jaka1         211 KEEHKIFLLKVLLPLHK--VKSLSVYHPQLAY---------CVVQFLEKDSTLTEPVVMALL-K----YWPKTHSPKEVM  274 (343)
T ss_dssp             CHHHHHHHHHTTGGGGT--SGGGGGTHHHHHH---------HHHHHHHHCGGGHHHHHHHHH-H----SSCSSCCTTHHH
T ss_pred             hHHHHHHHHHHHHHhcc--CcchHHHHHHHHH---------HHHHHHhcCchhHHHHHHHHH-H----hCCCCCchHHHH
Confidence               122 5799999999  9999999999998         788899999988887776644 5    99964   7888


Q ss_pred             HHHHHHHHHH-hcHHHHHHHHHHHHhhhhCCCCccccc-ccccCCCchhHhhhHhhhccchhHHHHHhhhcccccccccc
Q psy1352         275 VYNVLKTFME-MNSRLFDELTANYKAERQNSPFGHAFS-TSLAMPRDELAVAERALYFWNNEYIMSLMEENNHVVMPIMF  352 (399)
Q Consensus       275 a~nvLk~l~e-~d~~lF~~~~~~~~~~~~~~~~~~~~~-~~~ci~s~hfQVAEraL~~wnNe~i~~li~~n~~~i~Pii~  352 (399)
                      ..+.+..+++ +++.-|.++..            +.|+ ++.|++|+|||||||||++||||++++++++|+++|+|+|+
T Consensus       275 FL~el~~il~~~~~~~f~~~~~------------~lf~~la~ci~S~h~qVAErAl~~w~N~~~~~li~~n~~~i~Pii~  342 (343)
T d2jaka1         275 FLNELEEILDVIEPSEFVKIME------------PLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMF  342 (343)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHHH------------HHHHHHHHHHTCSSHHHHHHHHGGGGCHHHHHHHHHTHHHHTTTSC
T ss_pred             HHHHHHHHHHhCCHHHHHHHHH------------HHHHHHHHHhCCCcHHHHHHHHHHHCCHHHHHHHHhCccceEeeeC
Confidence            8888888877 55666766653            4565 89999999999999999999999999999999999999999


Q ss_pred             H
Q psy1352         353 P  353 (399)
Q Consensus       353 ~  353 (399)
                      |
T Consensus       343 P  343 (343)
T d2jaka1         343 P  343 (343)
T ss_dssp             C
T ss_pred             C
Confidence            8

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin beta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.38  E-value=7.4  Score=37.53  Aligned_cols=192  Identities=15%  Similarity=0.192  Sum_probs=107.4

Q ss_pred             CChHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHc------CCCChHHHHHHhhccCCCCCchhHhHHHHHHHHH
Q psy1352         123 PLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEK------DPTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEI  196 (399)
Q Consensus       123 PLkeEh~~fl~~vLlPLhk~~~l~~y~~qL~~cv~~fl~K------dp~L~~~vi~~LLk~WP~tns~KEvlFL~ELeeI  196 (399)
                      .+.++-+..++..++++...+.-  -..+++.|+...+..      .|.+.+.++..+..  |..+..-....+.-+..+
T Consensus        82 ~i~~~~k~~ik~~ll~~l~~~~~--~~~~~a~~i~~i~~~~~p~~~Wpeli~~L~~~l~~--~~~~~~~~~~~l~~l~~i  157 (876)
T d1qgra_          82 AIDANARREVKNYVLHTLGTETY--RPSSASQCVAGIACAEIPVNQWPELIPQLVANVTN--PNSTEHMKESTLEAIGYI  157 (876)
T ss_dssp             TSCHHHHHHHHHHHHHHTTTCCS--SSCHHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHC--TTCCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHCCccccHHHHHHHHHHhcC--CCCcHHHHHHHHHHHHHH
Confidence            35567788888888888776653  245678888766543      36677776665543  211111122356667777


Q ss_pred             HhccChhhHHhhHHHHHHHhhhhhCC--CcHHHHHHHHHhhcchhhHHHhhh--ccccchhcchHHHHHhhhcCCcHHHH
Q psy1352         197 LDVIEPTQFINIQEPLFRQIAKCVSS--PHFQVAERALYFWNNEYIMSLMEE--NNHVVMPIMFPALYRISKEHWNQTIV  272 (399)
Q Consensus       197 Le~i~~~eF~kv~~pLfk~lakCi~S--~HfQVAErAL~~w~Ne~i~~lI~~--n~~~i~PiI~~~L~~~s~~HWn~tV~  272 (399)
                      ++.+.++.+......++..+...+.+  +...|...|+..+.+-  ...+..  ......+.+...+... ..+-+..++
T Consensus       158 ~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~~-~~~~~~~v~  234 (876)
T d1qgra_         158 CQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNS--LEFTKANFDKESERHFIMQVVCEA-TQCPDTRVR  234 (876)
T ss_dssp             HHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHH--GGGCHHHHTSHHHHHHHHHHHHHH-TTCSSHHHH
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHH--HHHhhhhhhHHHHHHHHHHHHHHH-hcCCCHHHH
Confidence            77777777666556666666666644  4567777777765432  122211  1112233444444433 334566788


Q ss_pred             HHHHHHHHHHHHhcHHHHHHHHHHHHhhhhCCCCccccc-ccccCCCchhHhhhHhhhccc
Q psy1352         273 ALVYNVLKTFMEMNSRLFDELTANYKAERQNSPFGHAFS-TSLAMPRDELAVAERALYFWN  332 (399)
Q Consensus       273 ~la~nvLk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~~-~~~ci~s~hfQVAEraL~~wn  332 (399)
                      ..+...+..+++..++.+......           ..+. ...+..+++-.++..|+.+|.
T Consensus       235 ~~~~~~l~~l~~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~  284 (876)
T d1qgra_         235 VAALQNLVKIMSLYYQYMETYMGP-----------ALFAITIEAMKSDIDEVALQGIEFWS  284 (876)
T ss_dssp             HHHHHHHHHHHHHSGGGCHHHHTT-----------THHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHH-----------HHHHHHHHHhccccHHHHHHHHHHHH
Confidence            888888888776554333221110           0111 122334555667777777775