Psyllid ID: psy13545


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80-------
MPGNYKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKCKGHPNCKETENNT
cccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccccEEEccccc
cccccccHHHHHHHHHHHHcHcHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccccccccccccccc
mpgnykawypLSVILFYILAPLPTMLWKRytattgssdlhvRDLAIFITMGIVvssfglplimsrapvleplkckghpncketennt
mpgnykawyPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRApvleplkckghpncketennt
MPGNYKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKCKGHPNCKETENNT
****YKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKC*************
*PGNYKAWYPLSVILFYILAPLPTMLWK*************RDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKCKGHPNCKETEN**
MPGNYKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKCKGHP*********
MPGNYKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKCKGHPNCK******
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPGNYKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMSRAPVLEPLKCKGHPNCKETENNT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query87 2.2.26 [Sep-21-2011]
B3Y064130 Leptin receptor gene-rela N/A N/A 0.804 0.538 0.436 1e-10
O89013131 Leptin receptor gene-rela yes N/A 0.816 0.541 0.394 2e-10
Q32PD8131 Leptin receptor overlappi yes N/A 0.816 0.541 0.422 3e-10
Q9JLS8131 Leptin receptor gene-rela yes N/A 0.816 0.541 0.394 3e-10
Q5RDE9131 Leptin receptor overlappi yes N/A 0.816 0.541 0.422 4e-10
O95214131 Leptin receptor overlappi yes N/A 0.816 0.541 0.422 4e-10
Q9CQ74131 Leptin receptor overlappi no N/A 0.816 0.541 0.422 4e-10
Q561T9130 Leptin receptor gene-rela no N/A 0.758 0.507 0.402 1e-09
B9TRX0131 Leptin receptor gene-rela no N/A 0.816 0.541 0.394 3e-09
O15243131 Leptin receptor gene-rela no N/A 0.816 0.541 0.380 4e-09
>sp|B3Y064|OBRG_TAKRU Leptin receptor gene-related protein OS=Takifugu rubripes GN=leprot PE=2 SV=1 Back     alignment and function desciption
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)

Query: 4  NYKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIM 63
           Y  ++PL V++FY+L+P+PT +  R  +  GSS    R+LA F+T GIVVSSFGLP+++
Sbjct: 29 QYGIYWPLFVLIFYVLSPIPTFI-SRRLSDGGSSSNACRELAYFLTTGIVVSSFGLPIVL 87

Query: 64 SRAPVLEPLKC 74
          +R   ++   C
Sbjct: 88 ARTATIQWGAC 98




Involved in protein trafficking. May be involved in the down-regulation of membrane protein levels.
Takifugu rubripes (taxid: 31033)
>sp|O89013|OBRG_MOUSE Leptin receptor gene-related protein OS=Mus musculus GN=Leprot PE=1 SV=1 Back     alignment and function description
>sp|Q32PD8|LERL1_BOVIN Leptin receptor overlapping transcript-like 1 OS=Bos taurus GN=LEPROTL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9JLS8|OBRG_RAT Leptin receptor gene-related protein OS=Rattus norvegicus GN=Leprot PE=2 SV=1 Back     alignment and function description
>sp|Q5RDE9|LERL1_PONAB Leptin receptor overlapping transcript-like 1 OS=Pongo abelii GN=LEPROTL1 PE=2 SV=1 Back     alignment and function description
>sp|O95214|LERL1_HUMAN Leptin receptor overlapping transcript-like 1 OS=Homo sapiens GN=LEPROTL1 PE=2 SV=2 Back     alignment and function description
>sp|Q9CQ74|LERL1_MOUSE Leptin receptor overlapping transcript-like 1 OS=Mus musculus GN=Leprotl1 PE=2 SV=1 Back     alignment and function description
>sp|Q561T9|OBRG_DANRE Leptin receptor gene-related protein OS=Danio rerio GN=leprot PE=2 SV=1 Back     alignment and function description
>sp|B9TRX0|OBRG_PIG Leptin receptor gene-related protein OS=Sus scrofa GN=LEPROT PE=2 SV=1 Back     alignment and function description
>sp|O15243|OBRG_HUMAN Leptin receptor gene-related protein OS=Homo sapiens GN=LEPROT PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query87
307174121128 Leptin receptor overlapping transcript-l 0.781 0.531 0.558 2e-14
332031337135 Leptin receptor overlapping transcript-l 0.781 0.503 0.529 1e-13
383861739 4261 PREDICTED: dynein heavy chain 3, axonema 0.781 0.015 0.5 2e-13
242246945129 leptin receptor-like [Acyrthosiphon pisu 0.816 0.550 0.513 7e-13
307211147128 Leptin receptor overlapping transcript-l 0.758 0.515 0.537 9e-13
345486624117 PREDICTED: leptin receptor overlapping t 0.827 0.615 0.472 1e-12
350426765137 PREDICTED: leptin receptor overlapping t 0.781 0.496 0.529 1e-12
189238958129 PREDICTED: similar to leptin receptor-li 0.804 0.542 0.478 2e-12
380016278133 PREDICTED: leptin receptor overlapping t 0.781 0.511 0.521 3e-12
33518717133 leptin receptor-like protein [Rhodnius p 0.770 0.503 0.5 4e-12
>gi|307174121|gb|EFN64779.1| Leptin receptor overlapping transcript-like 1 [Camponotus floridanus] Back     alignment and taxonomy information
 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 54/68 (79%)

Query: 5  YKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMS 64
          YK W+P  V+LFYILAP+PT++ +RYT  +GS+     +LAIFITMG VVSSF LP++++
Sbjct: 24 YKVWWPFFVVLFYILAPIPTIIARRYTDDSGSNSNPCLELAIFITMGFVVSSFALPIVLA 83

Query: 65 RAPVLEPL 72
          R+PV +P+
Sbjct: 84 RSPVDQPV 91




Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031337|gb|EGI70850.1| Leptin receptor overlapping transcript-like 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|383861739|ref|XP_003706342.1| PREDICTED: dynein heavy chain 3, axonemal-like, partial [Megachile rotundata] Back     alignment and taxonomy information
>gi|242246945|ref|NP_001156269.1| leptin receptor-like [Acyrthosiphon pisum] gi|239788646|dbj|BAH70994.1| ACYPI008627 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307211147|gb|EFN87365.1| Leptin receptor overlapping transcript-like 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|345486624|ref|XP_001605479.2| PREDICTED: leptin receptor overlapping transcript-like 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350426765|ref|XP_003494536.1| PREDICTED: leptin receptor overlapping transcript-like 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|189238958|ref|XP_973202.2| PREDICTED: similar to leptin receptor-like protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|380016278|ref|XP_003692114.1| PREDICTED: leptin receptor overlapping transcript-like 1-like [Apis florea] Back     alignment and taxonomy information
>gi|33518717|gb|AAQ20841.1| leptin receptor-like protein [Rhodnius prolixus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query87
ZFIN|ZDB-GENE-040718-86131 zgc:92045 "zgc:92045" [Danio r 0.747 0.496 0.461 1e-11
UNIPROTKB|Q32PD8131 LEPROTL1 "Leptin receptor over 0.758 0.503 0.439 2.8e-11
UNIPROTKB|O95214131 LEPROTL1 "Leptin receptor over 0.758 0.503 0.439 2.8e-11
MGI|MGI:2687005131 Leprot "leptin receptor overla 0.770 0.511 0.402 2.8e-11
MGI|MGI:1915442131 Leprotl1 "leptin receptor over 0.758 0.503 0.439 3.5e-11
RGD|621034131 Leprot "leptin receptor overla 0.770 0.511 0.402 5.8e-11
ZFIN|ZDB-GENE-050417-314130 zgc:112430 "zgc:112430" [Danio 0.712 0.476 0.428 5.8e-11
UNIPROTKB|O15243131 LEPROT "Leptin receptor gene-r 0.770 0.511 0.388 5.2e-10
UNIPROTKB|B9TRX0131 LEPROT "Leptin receptor gene-r 0.770 0.511 0.402 5.2e-10
UNIPROTKB|J9JIK7130 LEPROT "Leptin receptor gene-r 0.770 0.515 0.402 5.2e-10
ZFIN|ZDB-GENE-040718-86 zgc:92045 "zgc:92045" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 30/65 (46%), Positives = 46/65 (70%)

Query:     5 YKAWYPLSVILFYILAPLPTMLWKRYTATTGSSDLHVRDLAIFITMGIVVSSFGLPLIMS 64
             Y A++PL ++ FYIL PLP  + +R    + S+    ++LA+F+T GIVVS+FGLP+I +
Sbjct:    30 YNAYWPLFLLFFYILCPLPHCISRRVVEDSDSASNACKELAVFLTTGIVVSAFGLPIIFA 89

Query:    65 RAPVL 69
             RA V+
Sbjct:    90 RAAVI 94




GO:0005575 "cellular_component" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|Q32PD8 LEPROTL1 "Leptin receptor overlapping transcript-like 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O95214 LEPROTL1 "Leptin receptor overlapping transcript-like 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2687005 Leprot "leptin receptor overlapping transcript" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:1915442 Leprotl1 "leptin receptor overlapping transcript-like 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621034 Leprot "leptin receptor overlapping transcript" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-314 zgc:112430 "zgc:112430" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O15243 LEPROT "Leptin receptor gene-related protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B9TRX0 LEPROT "Leptin receptor gene-related protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|J9JIK7 LEPROT "Leptin receptor gene-related protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query87
pfam04133120 pfam04133, Vps55, Vacuolar protein sorting 55 3e-18
>gnl|CDD|217917 pfam04133, Vps55, Vacuolar protein sorting 55 Back     alignment and domain information
 Score = 72.2 bits (178), Expect = 3e-18
 Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 5  YKAWYPLSVILFYILAPLPTMLWKRYTATTG--SSDLHVRDLAIFITMGIVVSSFGLPLI 62
          Y  W+PL V+LFY+LAPLP ++ +R ++ +   S   ++ D   F+T  +VVS F LP++
Sbjct: 22 YNNWWPLFVVLFYVLAPLPNLIARRCSSDSDFSSESGNLIDFGKFLTGALVVSGFALPIV 81

Query: 63 MSRAPVLEPLKC 74
          ++ A ++    C
Sbjct: 82 LAHAGLIGWGAC 93


Vps55 is involved in the secretion of the Golgi form of the soluble vacuolar carboxypeptidase Y, but not the trafficking of the membrane-bound vacuolar alkaline phosphatase. Both Vps55 and obesity receptor gene-related protein are important for functioning membrane trafficking to the vacuole/lysosome of eukaryotic cells. Length = 120


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00