Psyllid ID: psy13573

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHEEHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHcccHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MVTGHLLFWSLSLWAvgqsgifgphaPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Flexible Loop (DISEMBL)
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Low Complexity Region (SEG)
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFvvavggtvigviwgFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Disordered region (IsUnstruct)
***GHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIA***
Disordered Region (DISOPRED)
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Disordered Region (DISEMBL)
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Disordered Region (DISPRO)
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVTGHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIAELY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
P48763	813	Sodium/hydrogen exchanger	no	N/A	0.903	0.184	0.588	2e-46
Q14940	896	Sodium/hydrogen exchanger	yes	N/A	0.909	0.168	0.575	3e-46
Q9Z0X2	898	Sodium/hydrogen exchanger	no	N/A	0.915	0.169	0.564	5e-46
P50482	809	Sodium/hydrogen exchanger	no	N/A	0.903	0.185	0.575	2e-45
Q9UBY0	812	Sodium/hydrogen exchanger	no	N/A	0.903	0.184	0.575	3e-45
P48764	834	Sodium/hydrogen exchanger	no	N/A	0.915	0.182	0.588	1e-44
Q28362	839	Sodium/hydrogen exchanger	N/A	N/A	0.921	0.182	0.584	2e-44
P26432	832	Sodium/hydrogen exchanger	no	N/A	0.915	0.182	0.594	2e-44
P26433	831	Sodium/hydrogen exchanger	no	N/A	0.915	0.182	0.601	3e-44
Q01345	759	Na(+)/H(+) exchanger beta	N/A	N/A	0.915	0.200	0.540	2e-42

>sp|P48763|SL9A2_RAT Sodium/hydrogen exchanger 2 OS=Rattus norvegicus GN=Slc9a2 PE=1 SV=1

 Score =  184 bits (468), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/153 (58%), Positives = 123/153 (80%), Gaps = 3/153 (1%)

Query: 11  LSLWAVGQSGIFG-PHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           LSL+ + Q   FG     LL+ +LF +LISAVDPVAVLAVFE IHVNE LYI+VFGESLL
Sbjct: 187 LSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILVFGESLL 246

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++F+++ +M    +  VD+ +G+A+FFVV +GG +IG++ GF+  F TRFT
Sbjct: 247 NDAVTVVLYNLFKSFCQM--KTIQTVDVFAGIANFFVVGIGGVLIGILLGFIAAFTTRFT 304

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           + +RVIEP+F+F+ +YL+Y+TAE+FH+SGI+AI
Sbjct: 305 HNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAI 337

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Seems to play an important role in colonic sodium absorption.
Rattus norvegicus (taxid: 10116)

>sp|Q14940|SL9A5_HUMAN Sodium/hydrogen exchanger 5 OS=Homo sapiens GN=SLC9A5 PE=1 SV=2

 Score =  184 bits (466), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 88/153 (57%), Positives = 116/153 (75%), Gaps = 2/153 (1%)

Query: 12  SLWAVGQSGIFGP--HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           +LW + Q+G+  P   A LL+ +LF +LISAVDPVAVLAVFEE+HVNE L+I+VFGESLL
Sbjct: 153 ALWGLQQAGLVAPRVQAGLLDFLLFGSLISAVDPVAVLAVFEEVHVNETLFIIVFGESLL 212

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY +  ++ EMG  NV   D L G+AS FVV++GG  +G+++ FL    TRFT
Sbjct: 213 NDAVTVVLYKVCNSFVEMGSANVQATDYLKGVASLFVVSLGGAAVGLVFAFLLALTTRFT 272

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
             VR+IEP+ +F++AY AYLTAE+  +S ILA+
Sbjct: 273 KRVRIIEPLLVFLLAYAAYLTAEMASLSAILAV 305

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q9Z0X2|SL9A5_RAT Sodium/hydrogen exchanger 5 OS=Rattus norvegicus GN=Slc9a5 PE=1 SV=1

 Score =  183 bits (464), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 87/154 (56%), Positives = 116/154 (75%), Gaps = 2/154 (1%)

Query: 11  LSLWAVGQSGIFGP--HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESL 68
           ++LW + Q+G+  P   A LL+ +LF +LISAVDPVAVLAVFEE+HVNE L+I+VFGESL
Sbjct: 154 VALWGLQQAGLVAPRVQAGLLDFLLFGSLISAVDPVAVLAVFEEVHVNETLFIIVFGESL 213

Query: 69  LNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRF 128
           LNDAVT VLY +  ++ EMG  NV   D L G+AS FVV++GG  +G+++ FL    TRF
Sbjct: 214 LNDAVTAVLYKVCNSFVEMGSANVQATDYLKGVASLFVVSLGGAAVGLVFAFLLALTTRF 273

Query: 129 TNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           T  VR+IEP+ +F++AY AYLTAE+  +S ILA+
Sbjct: 274 TKRVRIIEPLLVFLLAYAAYLTAEMASLSAILAV 307

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Rattus norvegicus (taxid: 10116)

>sp|P50482|SL9A2_RABIT Sodium/hydrogen exchanger 2 OS=Oryctolagus cuniculus GN=SLC9A2 PE=2 SV=1

 Score =  181 bits (460), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/153 (57%), Positives = 122/153 (79%), Gaps = 3/153 (1%)

Query: 11  LSLWAVGQSGIFG-PHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           +SL+ + Q   FG     LL+ +LF +LISAVDPVAVLAVFE IHVNE LYI+VFGESLL
Sbjct: 186 VSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILVFGESLL 245

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++F+++ +M    +  +D+ +G+A+FFVV +GG +IG+  GF+  F TRFT
Sbjct: 246 NDAVTVVLYNLFKSFCQM--KTIETIDVFAGIANFFVVGIGGVLIGIFLGFIAAFTTRFT 303

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           + +RVIEP+F+F+ +YL+Y+TAE+FH+SGI+AI
Sbjct: 304 HNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAI 336

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Seems to play an important role in colonic sodium absorption.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q9UBY0|SL9A2_HUMAN Sodium/hydrogen exchanger 2 OS=Homo sapiens GN=SLC9A2 PE=2 SV=1

 Score =  180 bits (457), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 88/153 (57%), Positives = 122/153 (79%), Gaps = 3/153 (1%)

Query: 11  LSLWAVGQSGIFG-PHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           +SL+ + Q   FG     LL+ +LF +LISAVDPVAVLAVFE IHVNE LYI+VFGESLL
Sbjct: 186 VSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILVFGESLL 245

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++F+++ +M    +  +D+ +G+A+FFVV +GG +IG+  GF+  F TRFT
Sbjct: 246 NDAVTVVLYNLFKSFCQM--KTIETIDVFAGIANFFVVGIGGVLIGIFLGFIAAFTTRFT 303

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           + +RVIEP+F+F+ +YL+Y+TAE+FH+SGI+AI
Sbjct: 304 HNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAI 336

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Seems to play an important role in colonic sodium absorption.

Homo sapiens (taxid: 9606)

>sp|P48764|SL9A3_HUMAN Sodium/hydrogen exchanger 3 OS=Homo sapiens GN=SLC9A3 PE=1 SV=2

 Score =  178 bits (451), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/153 (58%), Positives = 124/153 (81%), Gaps = 1/153 (0%)

Query: 11  LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           LSL+ V  SG+ G     LL+ +LF +L++AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct: 160 LSLYGVFLSGLMGDLQIGLLDFLLFGSLMAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 219

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++FE++  +G +NV  VD + G+ SFFVV++GGT++GV++ FL   VTRFT
Sbjct: 220 NDAVTVVLYNVFESFVALGGDNVTGVDCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFT 279

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
             VR+IEP F+F+++YL+YLT+E+  +S ILAI
Sbjct: 280 KHVRIIEPGFVFIISYLSYLTSEMLSLSAILAI 312

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q28362|SL9A3_DIDVI Sodium/hydrogen exchanger 3 OS=Didelphis virginiana GN=SLC9A3 PE=1 SV=1

 Score =  177 bits (450), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/154 (58%), Positives = 124/154 (80%), Gaps = 1/154 (0%)

Query: 11  LSLWAVGQSGIFGPHA-PLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           LSL+ V  SGI G  +  LL+ +LF +LI+AVDPVAVLAVFEE+HVN++L+I+VFGESLL
Sbjct: 165 LSLYGVYLSGIMGDLSIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNDVLFIIVFGESLL 224

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++F+++  +G + V  VD + G+ SFFVV++GGT+IG+I+ FL   VTRFT
Sbjct: 225 NDAVTVVLYNVFDSFVSLGADKVTGVDCVKGIVSFFVVSLGGTLIGIIFAFLLSLVTRFT 284

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAIA 163
             VR+IEP F+F+++YL+YLT+E+  +S ILAI 
Sbjct: 285 KHVRIIEPGFVFIISYLSYLTSEMLSLSAILAIT 318

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Didelphis marsupialis virginiana (taxid: 9267)

>sp|P26432|SL9A3_RABIT Sodium/hydrogen exchanger 3 OS=Oryctolagus cuniculus GN=SLC9A3 PE=1 SV=1

 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/153 (59%), Positives = 123/153 (80%), Gaps = 1/153 (0%)

Query: 11  LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           LSL+ V  SGI G     LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct: 159 LSLYGVFLSGIMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 218

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++F+++  +G + V  VD + G+ SFFVV++GGT++GV++ FL   VTRFT
Sbjct: 219 NDAVTVVLYNVFQSFVTLGGDKVTGVDCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFT 278

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
             VRVIEP F+F+++YL+YLT+E+  +S ILAI
Sbjct: 279 KHVRVIEPGFVFIISYLSYLTSEMLSLSSILAI 311

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Oryctolagus cuniculus (taxid: 9986)

>sp|P26433|SL9A3_RAT Sodium/hydrogen exchanger 3 OS=Rattus norvegicus GN=Slc9a3 PE=1 SV=1

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 123/153 (80%), Gaps = 1/153 (0%)

Query: 11  LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
           LSL+ V  SG+ G     LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct: 157 LSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 216

Query: 70  NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFT 129
           NDAVTVVLY++FE++  +G + V  VD + G+ SFFVV++GGT++GVI+ FL   VTRFT
Sbjct: 217 NDAVTVVLYNVFESFVTLGGDAVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFT 276

Query: 130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
             VR+IEP F+FV++YL+YLT+E+  +S ILAI
Sbjct: 277 KHVRIIEPGFVFVISYLSYLTSEMLSLSAILAI 309

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Rattus norvegicus (taxid: 10116)

>sp|Q01345|NHEB_ONCMY Na(+)/H(+) exchanger beta OS=Oncorhynchus mykiss PE=2 SV=1

 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/159 (54%), Positives = 125/159 (78%), Gaps = 7/159 (4%)

Query: 4   GHLLFWSLSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVV 63
           G LL+    + +VG SG+      LL  +LF +++SAVDPVAVLAVFEEIH+NE+++I+V
Sbjct: 173 GGLLYALCQIESVGLSGV-----DLLACLLFGSIVSAVDPVAVLAVFEEIHINELVHILV 227

Query: 64  FGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTG 123
           FGESLLNDAVTVVLY++FE ++++G   VL  D+  G+  FFVV++GG ++G I+GFL  
Sbjct: 228 FGESLLNDAVTVVLYNLFEEFSKVGTVTVL--DVFLGVVCFFVVSLGGVLVGAIYGFLAA 285

Query: 124 FVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           F +RFT+  RVIEP+F+F+ +Y+AYL++E+FH+SGI+A+
Sbjct: 286 FTSRFTSHTRVIEPLFVFLYSYMAYLSSEMFHLSGIMAL 324

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient.

Oncorhynchus mykiss (taxid: 8022)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
340719419	986	PREDICTED: sodium/hydrogen exchanger 5-l	0.909	0.153	0.821	3e-68
242019593	1064	sodium/hydrogen exchanger, putative [Ped	0.909	0.141	0.834	5e-68
332031580	1047	Sodium/hydrogen exchanger 3 [Acromyrmex	0.915	0.145	0.809	6e-68
328779129	1042	PREDICTED: sodium/hydrogen exchanger 3 [	0.909	0.144	0.834	1e-67
383848213	1039	PREDICTED: sodium/hydrogen exchanger 3-l	0.909	0.145	0.827	1e-67
350417576	1044	PREDICTED: sodium/hydrogen exchanger 3-l	0.909	0.144	0.821	3e-67
350417574	1037	PREDICTED: sodium/hydrogen exchanger 3-l	0.909	0.145	0.821	3e-67
322802306	1023	hypothetical protein SINV_10800 [Solenop	0.915	0.148	0.796	3e-66
118791508	1222	AGAP009036-PA [Anopheles gambiae str. PE	0.909	0.123	0.788	7e-66
37727744	1221	alkali metal ion/proton exchanger 3 [Ano	0.909	0.123	0.788	7e-66

>gi|340719419|ref|XP_003398151.1| PREDICTED: sodium/hydrogen exchanger 5-like [Bombus terrestris]

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 124/151 (82%), Positives = 136/151 (90%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLW +G+SG+FG   PLL+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND
Sbjct: 246 SLWVLGKSGLFGFETPLLQMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 305

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVVLYHMFEAY E+G   +LY D+LSG ASFFVVA+GGT+IGVIWG  TGFVTRFT++
Sbjct: 306 AVTVVLYHMFEAYNEIGPTEILYTDVLSGFASFFVVAIGGTIIGVIWGIATGFVTRFTHQ 365

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMS ILAI
Sbjct: 366 VRVIEPIFIFVMAYLAYLNAEIFHMSSILAI 396

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242019593|ref|XP_002430244.1| sodium/hydrogen exchanger, putative [Pediculus humanus corporis] gi|212515351|gb|EEB17506.1| sodium/hydrogen exchanger, putative [Pediculus humanus corporis]

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 126/151 (83%), Positives = 140/151 (92%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SL+AVG +G+FG   PLL+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND
Sbjct: 209 SLYAVGLTGLFGVQTPLLQMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 268

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVVLYHMFEAY EMG +N+LY D+LSGLASF VVA+GGT+IG++WGFLTG VTR+T+E
Sbjct: 269 AVTVVLYHMFEAYNEMGPSNILYTDVLSGLASFLVVALGGTIIGIVWGFLTGLVTRYTDE 328

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMSGILAI
Sbjct: 329 VRVIEPIFIFVMAYLAYLNAEIFHMSGILAI 359

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031580|gb|EGI71052.1| Sodium/hydrogen exchanger 3 [Acromyrmex echinatior]

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 123/152 (80%), Positives = 141/152 (92%)

Query: 11  LSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLN 70
           +SLW +G+SGIFG   P+L+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLN
Sbjct: 253 VSLWLLGKSGIFGCETPILDMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLN 312

Query: 71  DAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTN 130
           DAVTVVLYHMFE Y+EMG + ++Y D+LSGLASF VVA+GGTVIGV+WGF TGFVTRFT+
Sbjct: 313 DAVTVVLYHMFETYSEMGPSRIIYTDVLSGLASFLVVAIGGTVIGVVWGFATGFVTRFTH 372

Query: 131 EVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           +VRVIEPIFIFVMAYLAYL+AEIFH+SGI+AI
Sbjct: 373 QVRVIEPIFIFVMAYLAYLSAEIFHLSGIMAI 404

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779129|ref|XP_391857.3| PREDICTED: sodium/hydrogen exchanger 3 [Apis mellifera]

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 126/151 (83%), Positives = 138/151 (91%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLW +G+SG+FG   PLL+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND
Sbjct: 244 SLWVLGKSGLFGFETPLLQMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 303

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVVLYHMFEAY E+G   +LY D+LSGLASFFVVA+GGT+IGVIWGF TGFVTRFT++
Sbjct: 304 AVTVVLYHMFEAYNEIGPTEILYTDVLSGLASFFVVAIGGTIIGVIWGFGTGFVTRFTHQ 363

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMS ILAI
Sbjct: 364 VRVIEPIFIFVMAYLAYLNAEIFHMSSILAI 394

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383848213|ref|XP_003699746.1| PREDICTED: sodium/hydrogen exchanger 3-like [Megachile rotundata]

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 125/151 (82%), Positives = 137/151 (90%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLW +G+ G+FG   PLL+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND
Sbjct: 233 SLWVLGKIGLFGFETPLLQMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 292

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVVLYHMFEAY E+G   +LY DLL+GLASFFVVA+GGT+IGVIWGF TGFVTRFT++
Sbjct: 293 AVTVVLYHMFEAYNEIGPTEILYTDLLTGLASFFVVAIGGTIIGVIWGFATGFVTRFTHQ 352

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMS ILAI
Sbjct: 353 VRVIEPIFIFVMAYLAYLNAEIFHMSSILAI 383

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417576|ref|XP_003491490.1| PREDICTED: sodium/hydrogen exchanger 3-like isoform 2 [Bombus impatiens]

 Score =  259 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 124/151 (82%), Positives = 136/151 (90%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLW +G+SG+FG   PLL+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND
Sbjct: 246 SLWVLGKSGLFGFETPLLQMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 305

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVVLYHMFEAY E+G   +LY D+LSG ASFFVVA+GGT+IGVIWG  TGFVTRFT++
Sbjct: 306 AVTVVLYHMFEAYNEIGPTEILYTDVLSGFASFFVVAIGGTIIGVIWGIATGFVTRFTHQ 365

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMS ILAI
Sbjct: 366 VRVIEPIFIFVMAYLAYLNAEIFHMSSILAI 396

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417574|ref|XP_003491489.1| PREDICTED: sodium/hydrogen exchanger 3-like isoform 1 [Bombus impatiens]

 Score =  259 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 124/151 (82%), Positives = 136/151 (90%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLW +G+SG+FG   PLL+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND
Sbjct: 246 SLWVLGKSGLFGFETPLLQMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 305

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVVLYHMFEAY E+G   +LY D+LSG ASFFVVA+GGT+IGVIWG  TGFVTRFT++
Sbjct: 306 AVTVVLYHMFEAYNEIGPTEILYTDVLSGFASFFVVAIGGTIIGVIWGIATGFVTRFTHQ 365

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMS ILAI
Sbjct: 366 VRVIEPIFIFVMAYLAYLNAEIFHMSSILAI 396

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322802306|gb|EFZ22702.1| hypothetical protein SINV_10800 [Solenopsis invicta]

 Score =  256 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 121/152 (79%), Positives = 139/152 (91%)

Query: 11  LSLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLN 70
           +SLW +G+SGIFG   P+L+M LF+ALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLN
Sbjct: 262 VSLWLLGKSGIFGCETPILDMFLFSALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLN 321

Query: 71  DAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTN 130
           DAVTVVLYHMFE Y+EMG + + Y D+LSGLASF VVA+GGT+IG++WGF T FVTRFT+
Sbjct: 322 DAVTVVLYHMFETYSEMGPSRIAYTDVLSGLASFLVVAIGGTIIGIVWGFATSFVTRFTH 381

Query: 131 EVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           +VRVIEPIFIFVMAYLAYL+AEIFH+SGILAI
Sbjct: 382 QVRVIEPIFIFVMAYLAYLSAEIFHLSGILAI 413

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118791508|ref|XP_552951.2| AGAP009036-PA [Anopheles gambiae str. PEST] gi|116117635|gb|EAL39028.2| AGAP009036-PA [Anopheles gambiae str. PEST]

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 119/151 (78%), Positives = 136/151 (90%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLWA GQ+GIFG   P L + LF++LI+AVDPVAVLAVFEEIHVNE+LYIVVFGESLLND
Sbjct: 353 SLWACGQTGIFGVDLPFLHIFLFSSLIAAVDPVAVLAVFEEIHVNEVLYIVVFGESLLND 412

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVV+YHMFE Y E+G + ++ VD++SG+ASFFVVA+GGT+IGVIWGFLTG VTRFT+ 
Sbjct: 413 AVTVVMYHMFEVYNEIGASEIIAVDIVSGIASFFVVALGGTIIGVIWGFLTGLVTRFTDH 472

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMSGILAI
Sbjct: 473 VRVIEPIFIFVMAYLAYLNAEIFHMSGILAI 503

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|37727744|gb|AAO34131.1| alkali metal ion/proton exchanger 3 [Anopheles gambiae]

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 119/151 (78%), Positives = 136/151 (90%)

Query: 12  SLWAVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLND 71
           SLWA GQ+GIFG   P L + LF++LI+AVDPVAVLAVFEEIHVNE+LYIVVFGESLLND
Sbjct: 352 SLWACGQTGIFGVDLPFLHIFLFSSLIAAVDPVAVLAVFEEIHVNEVLYIVVFGESLLND 411

Query: 72  AVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNE 131
           AVTVV+YHMFE Y E+G + ++ VD++SG+ASFFVVA+GGT+IGVIWGFLTG VTRFT+ 
Sbjct: 412 AVTVVMYHMFEVYNEIGASEIIAVDIVSGIASFFVVALGGTIIGVIWGFLTGLVTRFTDH 471

Query: 132 VRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           VRVIEPIFIFVMAYLAYL AEIFHMSGILAI
Sbjct: 472 VRVIEPIFIFVMAYLAYLNAEIFHMSGILAI 502

Source: Anopheles gambiae

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
FB|FBgn0040297	1322	Nhe2 "Na[+]/H[+] hydrogen exch	0.909	0.114	0.679	1.5e-46
UNIPROTKB|F1NCG8	715	SLC9A3 "Sodium/hydrogen exchan	0.915	0.212	0.542	2.8e-38
UNIPROTKB|E9PF67	825	SLC9A3 "Sodium/hydrogen exchan	0.915	0.184	0.542	7.8e-38
UNIPROTKB|P48764	834	SLC9A3 "Sodium/hydrogen exchan	0.915	0.182	0.542	8.1e-38
UNIPROTKB|F1MU00	835	SLC9A3 "Sodium/hydrogen exchan	0.915	0.182	0.549	8.1e-38
UNIPROTKB|P26432	832	SLC9A3 "Sodium/hydrogen exchan	0.915	0.182	0.549	2.2e-37
UNIPROTKB|D4A5P0	899	Slc9a5 "Sodium/hydrogen exchan	0.915	0.169	0.538	2.7e-37
RGD|3720	831	Slc9a3 "solute carrier family	0.915	0.182	0.549	2.8e-37
UNIPROTKB|G3V7Y7	831	Slc9a3 "Sodium/hydrogen exchan	0.915	0.182	0.549	2.8e-37
UNIPROTKB|Q14940	896	SLC9A5 "Sodium/hydrogen exchan	0.909	0.168	0.542	3.4e-37

FB|FBgn0040297 Nhe2 "Na[+]/H[+] hydrogen exchanger 2" [Drosophila melanogaster (taxid:7227)]

 Score = 500 (181.1 bits), Expect = 1.5e-46, P = 1.5e-46
 Identities = 104/153 (67%), Positives = 120/153 (78%)

Query:    12 SLWAVGQSGIFGP-HAP-LLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             SL+A G+ GI+G    P L+++ LFA+LISAVDPVAVLAVFEEIHVNEILYIVVFGESLL
Sbjct:   302 SLYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 361

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVV+YHM E+Y E+G + ++  D+ SG+ SFF              FLTG VTRFT
Sbjct:   362 NDAVTVVMYHMMESYNEIGLDKIIAQDIASGVGSFFVVALGGTAIGIIWGFLTGLVTRFT 421

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
             + VRVIEPIFIFVMAYLAYL AEIFHMSGILAI
Sbjct:   422 DHVRVIEPIFIFVMAYLAYLNAEIFHMSGILAI 454

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;NAS

GO:0006885 "regulation of pH" evidence=IEA;NAS

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006873 "cellular ion homeostasis" evidence=IEP

UNIPROTKB|F1NCG8 SLC9A3 "Sodium/hydrogen exchanger" [Gallus gallus (taxid:9031)]

 Score = 416 (151.5 bits), Expect = 2.8e-38, P = 2.8e-38
 Identities = 83/153 (54%), Positives = 112/153 (73%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V ++GI G   + LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   105 LSLYGVYRTGIMGHLDSGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 164

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++FE++  +G  NV  ++ + G+ SFF              FL   VTRFT
Sbjct:   165 NDAVTVVLYNVFESFVSIGPENVTGIECVKGIVSFFVVSLGGTLVGIFFAFLLSLVTRFT 224

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP F+F+++YL+YLTAE+  +S ILAI
Sbjct:   225 KHVRIIEPGFVFIISYLSYLTAEMLSLSAILAI 257

GO:0016021 "integral to membrane" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

UNIPROTKB|E9PF67 SLC9A3 "Sodium/hydrogen exchanger" [Homo sapiens (taxid:9606)]

 Score = 414 (150.8 bits), Expect = 7.8e-38, P = 7.8e-38
 Identities = 83/153 (54%), Positives = 111/153 (72%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V  SG+ G     LL+ +LF +L++AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   160 LSLYGVFLSGLMGDLQIGLLDFLLFGSLMAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 219

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++FE++  +G +NV  VD + G+ SFF              FL   VTRFT
Sbjct:   220 NDAVTVVLYNVFESFVALGGDNVTGVDCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFT 279

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP F+F+++YL+YLT+E+  +S ILAI
Sbjct:   280 KHVRIIEPGFVFIISYLSYLTSEMLSLSAILAI 312

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P48764 SLC9A3 "Sodium/hydrogen exchanger 3" [Homo sapiens (taxid:9606)]

 Score = 414 (150.8 bits), Expect = 8.1e-38, P = 8.1e-38
 Identities = 83/153 (54%), Positives = 111/153 (72%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V  SG+ G     LL+ +LF +L++AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   160 LSLYGVFLSGLMGDLQIGLLDFLLFGSLMAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 219

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++FE++  +G +NV  VD + G+ SFF              FL   VTRFT
Sbjct:   220 NDAVTVVLYNVFESFVALGGDNVTGVDCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFT 279

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP F+F+++YL+YLT+E+  +S ILAI
Sbjct:   280 KHVRIIEPGFVFIISYLSYLTSEMLSLSAILAI 312

GO:0016021 "integral to membrane" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0005903 "brush border" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1MU00 SLC9A3 "Sodium/hydrogen exchanger" [Bos taurus (taxid:9913)]

 Score = 414 (150.8 bits), Expect = 8.1e-38, P = 8.1e-38
 Identities = 84/153 (54%), Positives = 111/153 (72%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V  SG+ G  +  LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   162 LSLYGVFLSGLMGDLNIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 221

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++FE++  +G + V  VD + G+ SFF              FL   VTRFT
Sbjct:   222 NDAVTVVLYNVFESFVTLGGDKVTGVDCVKGIVSFFVVSLGGTLVGIVFAFLLSLVTRFT 281

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP F+FV++YL+YLT+E+  +S ILAI
Sbjct:   282 KHVRIIEPGFVFVLSYLSYLTSEMLSLSAILAI 314

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P26432 SLC9A3 "Sodium/hydrogen exchanger 3" [Oryctolagus cuniculus (taxid:9986)]

 Score = 410 (149.4 bits), Expect = 2.2e-37, P = 2.2e-37
 Identities = 84/153 (54%), Positives = 110/153 (71%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V  SGI G     LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   159 LSLYGVFLSGIMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 218

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++F+++  +G + V  VD + G+ SFF              FL   VTRFT
Sbjct:   219 NDAVTVVLYNVFQSFVTLGGDKVTGVDCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFT 278

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VRVIEP F+F+++YL+YLT+E+  +S ILAI
Sbjct:   279 KHVRVIEPGFVFIISYLSYLTSEMLSLSSILAI 311

GO:0005515 "protein binding" evidence=IPI

GO:0005903 "brush border" evidence=IDA

GO:0009986 "cell surface" evidence=IDA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IDA

UNIPROTKB|D4A5P0 Slc9a5 "Sodium/hydrogen exchanger" [Rattus norvegicus (taxid:10116)]

 Score = 410 (149.4 bits), Expect = 2.7e-37, P = 2.7e-37
 Identities = 83/154 (53%), Positives = 106/154 (68%)

Query:    11 LSLWAVGQSGIFGPH--APLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESL 68
             ++LW + Q+G+  P   A LL+ +LF +LISAVDPVAVLAVFEE+HVNE L+I+VFGESL
Sbjct:   154 VALWGLQQAGLVAPRVQAGLLDFLLFGSLISAVDPVAVLAVFEEVHVNETLFIIVFGESL 213

Query:    69 LNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRF 128
             LNDAVTVVLY +  ++ EMG  NV   D L G+AS F              FL    TRF
Sbjct:   214 LNDAVTVVLYKVCNSFVEMGSANVQATDYLKGVASLFVVSLGGAAVGLVFAFLLALTTRF 273

Query:   129 TNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
             T  VR+IEP+ +F++AY AYLTAE+  +S ILA+
Sbjct:   274 TKRVRIIEPLLVFLLAYAAYLTAEMASLSAILAV 307

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|3720 Slc9a3 "solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3" [Rattus norvegicus (taxid:10116)]

 Score = 409 (149.0 bits), Expect = 2.8e-37, P = 2.8e-37
 Identities = 84/153 (54%), Positives = 110/153 (71%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V  SG+ G     LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   157 LSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 216

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++FE++  +G + V  VD + G+ SFF              FL   VTRFT
Sbjct:   217 NDAVTVVLYNVFESFVTLGGDAVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFT 276

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP F+FV++YL+YLT+E+  +S ILAI
Sbjct:   277 KHVRIIEPGFVFVISYLSYLTSEMLSLSAILAI 309

GO:0002028 "regulation of sodium ion transport" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005903 "brush border" evidence=IDA

GO:0006814 "sodium ion transport" evidence=ISO;IDA

GO:0006885 "regulation of pH" evidence=ISO;IDA

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISO;IDA

GO:0015992 "proton transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO;IDA

GO:0031526 "brush border membrane" evidence=IDA

GO:0035725 "sodium ion transmembrane transport" evidence=ISO

GO:0051384 "response to glucocorticoid stimulus" evidence=IEP

UNIPROTKB|G3V7Y7 Slc9a3 "Sodium/hydrogen exchanger" [Rattus norvegicus (taxid:10116)]

 Score = 409 (149.0 bits), Expect = 2.8e-37, P = 2.8e-37
 Identities = 84/153 (54%), Positives = 110/153 (71%)

Query:    11 LSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             LSL+ V  SG+ G     LL+ +LF +LI+AVDPVAVLAVFEE+HVNE+L+I+VFGESLL
Sbjct:   157 LSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLL 216

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY++FE++  +G + V  VD + G+ SFF              FL   VTRFT
Sbjct:   217 NDAVTVVLYNVFESFVTLGGDAVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFT 276

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP F+FV++YL+YLT+E+  +S ILAI
Sbjct:   277 KHVRIIEPGFVFVISYLSYLTSEMLSLSAILAI 309

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

UNIPROTKB|Q14940 SLC9A5 "Sodium/hydrogen exchanger 5" [Homo sapiens (taxid:9606)]

 Score = 409 (149.0 bits), Expect = 3.4e-37, P = 3.4e-37
 Identities = 83/153 (54%), Positives = 105/153 (68%)

Query:    12 SLWAVGQSGIFGPH--APLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLL 69
             +LW + Q+G+  P   A LL+ +LF +LISAVDPVAVLAVFEE+HVNE L+I+VFGESLL
Sbjct:   153 ALWGLQQAGLVAPRVQAGLLDFLLFGSLISAVDPVAVLAVFEEVHVNETLFIIVFGESLL 212

Query:    70 NDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFXXXXXXXXXXXXXXFLTGFVTRFT 129
             NDAVTVVLY +  ++ EMG  NV   D L G+AS F              FL    TRFT
Sbjct:   213 NDAVTVVLYKVCNSFVEMGSANVQATDYLKGVASLFVVSLGGAAVGLVFAFLLALTTRFT 272

Query:   130 NEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
               VR+IEP+ +F++AY AYLTAE+  +S ILA+
Sbjct:   273 KRVRIIEPLLVFLLAYAAYLTAEMASLSAILAV 305

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P35449	NHX9_CAEEL	No assigned EC number	0.5197	0.9156	0.2278	yes	N/A
Q14940	SL9A5_HUMAN	No assigned EC number	0.5751	0.9096	0.1685	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	166
TIGR00840	559	TIGR00840, b_cpa1, sodium/hydrogen exchanger 3	7e-56
pfam00999	370	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang	1e-20
COG0025	429	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport	8e-15
TIGR00831	525	TIGR00831, a_cpa1, Na+/H+ antiporter, bacterial fo	1e-14
COG3263	574	COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antip	4e-05

>gnl|CDD|233147 TIGR00840, b_cpa1, sodium/hydrogen exchanger 3

 Score =  183 bits (467), Expect = 7e-56
 Identities = 89/159 (55%), Positives = 116/159 (72%), Gaps = 1/159 (0%)

Query: 5   HLLFWSLSLWAVGQSGIFGP-HAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVV 63
           +     LSL+ +   G FG     LL+ +LF +LISAVDPVAVLAVFEE HVNE LYI++
Sbjct: 107 NAFVIGLSLYGICLIGGFGSIDIGLLDNLLFGSLISAVDPVAVLAVFEEYHVNEKLYIII 166

Query: 64  FGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTG 123
           FGESLLNDAVTVVLY+ F  + +     V  VD+  G ASFFVV  GG ++GV++GFL  
Sbjct: 167 FGESLLNDAVTVVLYNTFIKFHKTADEPVTIVDVFEGCASFFVVTCGGLLVGVVFGFLVA 226

Query: 124 FVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           F+TRFT+ +R IEP+F+F+++YL+YL AE  H+SGILA+
Sbjct: 227 FITRFTHHIRQIEPLFVFLISYLSYLFAETLHLSGILAL 265

The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36)The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals.Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in(1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles.This model is specific for the eukaryotic members members of this family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 559

>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family

 Score = 86.5 bits (215), Expect = 1e-20
 Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 5/145 (3%)

Query: 19  SGIFGPHAPLLEMMLFAALISAVDPVAVLAVF-EEIHVNEILYIVVFGESLLNDAVTVVL 77
           + + G   PLLE +LF A +SA  PV VLA+  E   +N  L  ++ GES+LNDAV VVL
Sbjct: 97  ALLGGLGIPLLEALLFGAALSATSPVVVLAILKERGRLNTRLGTLILGESVLNDAVAVVL 156

Query: 78  YHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEP 137
             +  A   +G       DL   L  F VVA+GG ++G+++G+L   +TRFT+  R +E 
Sbjct: 157 LAVLLALAGVGGL----SDLGLLLLIFLVVALGGLLLGLVFGWLLRLITRFTSGDRELEV 212

Query: 138 IFIFVMAYLAYLTAEIFHMSGILAI 162
           + +  +A LA L AE+  +SGIL  
Sbjct: 213 LLVLALALLAALLAELLGLSGILGA 237

Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. Length = 370

>gnl|CDD|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]

 Score = 70.4 bits (173), Expect = 8e-15
 Identities = 44/137 (32%), Positives = 69/137 (50%)

Query: 27  PLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVLYHMFEAYTE 86
           PL    L  A++S  DPVAV  +F+ + V + +  ++ GESLLND V +VL+ +  A   
Sbjct: 117 PLAAAFLLGAILSPTDPVAVSPIFKRVRVPKRIRTILEGESLLNDGVGIVLFKVALAALL 176

Query: 87  MGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRVIEPIFIFVMAYL 146
                 L   LL  L       + G ++G + G L   + R      ++E +   ++A+ 
Sbjct: 177 GTGAFSLGWALLLFLIEALGGILLGLLLGYLLGRLLRRLDRRGWTSPLLETLLTLLLAFA 236

Query: 147 AYLTAEIFHMSGILAIA 163
           AYL AE   +SGILA+ 
Sbjct: 237 AYLLAEALGVSGILAVV 253

Length = 429

>gnl|CDD|129911 TIGR00831, a_cpa1, Na+/H+ antiporter, bacterial form

 Score = 69.9 bits (171), Expect = 1e-14
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 4/148 (2%)

Query: 15  AVGQSGIFGPHAPLLEMMLFAALISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVT 74
            VG S  +    PL   ++  A++S  D VAVL  F+ I   + L I++ GESLLND   
Sbjct: 93  VVGFSLNWILGIPLALALILGAVLSPTDAVAVLGTFKSIRAPKKLSILLEGESLLNDGAA 152

Query: 75  VVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVGGTVIGVIWGFLTGFVTRFTNEVRV 134
           +V++ +  A            D L+    F VV VGG   G+  G+L   + R   +  +
Sbjct: 153 LVVFAIAVAVAL----GKGVFDPLNAALDFAVVCVGGIAAGLAVGYLAYRLLRAKIDDPL 208

Query: 135 IEPIFIFVMAYLAYLTAEIFHMSGILAI 162
           +E     +  +  +L AE FH SG++A+
Sbjct: 209 VEIALTILAPFAGFLLAERFHFSGVIAV 236

The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 525

>gnl|CDD|225802 COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 15/163 (9%)

Query: 10  SLSLWAVG---QSGIFGPHA------PLLEMMLFAALISAVDPVAVLAVFEEIHVNEILY 60
           +LSL  +G    SG+ G  A        LE +L  A++ + D  AV ++    ++NE + 
Sbjct: 91  ALSLATLGVLITSGLTGVAAAYLLNLDWLEGLLIGAIVGSTDAAAVFSLLGGKNLNERVA 150

Query: 61  IVVFGESLLNDAVTVVLYHMFEAYTEMGHNNVLYVDLLSGLASFFVVAVG-GTVIGVIWG 119
             +  ES  ND + V L          G  N     L  G    F+   G G ++G+  G
Sbjct: 151 STLEIESGSNDPMAVFLTITLIELIAGGETN-----LSWGFLLGFLQQFGLGLLLGLGGG 205

Query: 120 FLTGFVTRFTNEVRVIEPIFIFVMAYLAYLTAEIFHMSGILAI 162
            L   +    N    + PI       L +        SGILA+
Sbjct: 206 KLLLQLINRINLDSGLYPILALAGGLLIFSLTGAIGGSGILAV 248

Length = 574

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	166
2htg_A	28	Structural And Functional Characterization Of Tm Vi		8e-06
2l0e_A	33	Structural And Functional Analysis Of Tm Vi Of The		7e-05

>pdb|2HTG|A Chain A, Structural And Functional Characterization Of Tm Vii Of The Nhe1 Isoform Of The Na+H+ EXCHANGER Length = 28

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/25 (84%), Positives = 25/25 (100%)
Query: 54 HVNEILYIVVFGESLLNDAVTVVLY 78
          H+NE+L+I+VFGESLLNDAVTVVLY
Sbjct: 1  HINELLHILVFGESLLNDAVTVVLY 25

>pdb|2L0E|A Chain A, Structural And Functional Analysis Of Tm Vi Of The Nhe1 Isoform Of The Na+H+ EXCHANGER Length = 33

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/23 (82%), Positives = 22/23 (95%)
Query: 32 MLFAALISAVDPVAVLAVFEEIH 54
          +LF ++ISAVDPVAVLAVFEEIH
Sbjct: 7  LLFGSIISAVDPVAVLAVFEEIH 29

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
2l0e_A	33	Sodium/hydrogen exchanger 1; transmembrane helix,	6e-09
2htg_A	28	NHE-1, NHE1 isoform of Na+/H+ exchanger 1, solute;	5e-07

>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens} Length = 33

 Score = 48.5 bits (115), Expect = 6e-09
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 30 EMMLFAALISAVDPVAVLAVFEEIHVNE 57
          + +LF ++ISAVDPVAVLAVFEEIH  +
Sbjct: 5  DNLLFGSIISAVDPVAVLAVFEEIHKKK 32

>2htg_A NHE-1, NHE1 isoform of Na+/H+ exchanger 1, solute; membrane protein, transmembrane segment, helix-KINK-helix; NMR {Synthetic} Length = 28

 Score = 43.1 bits (101), Expect = 5e-07
 Identities = 21/25 (84%), Positives = 25/25 (100%)

Query: 54 HVNEILYIVVFGESLLNDAVTVVLY 78
          H+NE+L+I+VFGESLLNDAVTVVLY
Sbjct: 1  HINELLHILVFGESLLNDAVTVVLY 25

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
2l0e_A	33	Sodium/hydrogen exchanger 1; transmembrane helix,	98.95
2htg_A	28	NHE-1, NHE1 isoform of Na+/H+ exchanger 1, solute;	98.7
2k3c_A	33	TMIX peptide; membrane peptide, dodecylphosphochol	96.05
1zcd_A	388	Na(+)/H(+) antiporter 1; membrane protein; 3.45A {	81.01

>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}

Probab=98.95  E-value=4.3e-11  Score=67.37  Aligned_cols=31  Identities=61%  Similarity=0.878  Sum_probs=28.6

Q ss_pred             cHHHHHHhhhhhccccHHHHHHHhhhcCCCc
Q psy13573         27 PLLEMMLFAALISAVDPVAVLAVFEEIHVNE   57 (166)
Q Consensus        27 ~~~~all~Gails~TDpvav~~il~~~~~p~   57 (166)
                      +|..+++|||++|||||+++.+++|+.++|+
T Consensus         2 ~~~~~llfGAiis~TDpVavlaif~~~~vp~   32 (33)
T 2l0e_A            2 KKKDNLLFGSIISAVDPVAVLAVFEEIHKKK   32 (33)
T ss_dssp             CCCCCCTTHHHHTTCCHHHHHHHHHHHTTTC
T ss_pred             cHHHHHHHHHHccCCChHHHHHHHHHcCCCC
Confidence            4667899999999999999999999999986

>2htg_A NHE-1, NHE1 isoform of Na+/H+ exchanger 1, solute; membrane protein, transmembrane segment, helix-KINK-helix; NMR {Synthetic}

Probab=98.70  E-value=6.7e-10  Score=59.88  Aligned_cols=26  Identities=81%  Similarity=1.200  Sum_probs=24.2

Q ss_pred             CCCcchhhhheeehhhhhHHHHHHHH
Q psy13573         54 HVNEILYIVVFGESLLNDAVTVVLYH   79 (166)
Q Consensus        54 ~~p~~l~~ll~gEs~lND~~aivlf~   79 (166)
                      ++|++++.+++|||++||++++++|.
T Consensus         1 ~V~~~L~~lvfGESllNDavaiVlf~   26 (28)
T 2htg_A            1 HINELLHILVFGESLLNDAVTVVLYK   26 (28)
T ss_dssp             CCSSTTHHHHTTTTTTTTTTTTTTTT
T ss_pred             CCCceEEEEEEeeeeecccEEEEEEe
Confidence            57999999999999999999999885

>2k3c_A TMIX peptide; membrane peptide, dodecylphosphocholine micelle, NHE1, Na+/H+ transporter, metal transport; NMR {Synthetic}

Probab=96.05  E-value=0.00017  Score=40.11  Aligned_cols=22  Identities=55%  Similarity=1.068  Sum_probs=19.6

Q ss_pred             HHHHHHHHHHhhcchhhhhhhh
Q psy13573        143 MAYLAYLTAEIFHMSGILAIAE  164 (166)
Q Consensus       143 ~~~~~y~lae~l~~SGilAv~~  164 (166)
                      .+|.+|.+||.+|.||++|++.
T Consensus         2 ~~y~~Yl~AE~~~lSGIlavv~   23 (33)
T 2k3c_A            2 KSYMAYLSAELFHLSGIMALIA   23 (33)
T ss_dssp             CCSTTTGGGSSSTTTTTTTTTT
T ss_pred             hhHHHHHHHHHhCcChHHHHHH
Confidence            4688999999999999999874

>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A

Probab=81.01  E-value=5.7  Score=33.40  Aligned_cols=57  Identities=18%  Similarity=0.127  Sum_probs=47.3

Q ss_pred             CCcHHHHHHhhhhhccccHHHHHHHhhh--cCCCcchhhhheeehhhhhHHHHHHHHHH
Q psy13573         25 HAPLLEMMLFAALISAVDPVAVLAVFEE--IHVNEILYIVVFGESLLNDAVTVVLYHMF   81 (166)
Q Consensus        25 ~~~~~~all~Gails~TDpvav~~il~~--~~~p~~l~~ll~gEs~lND~~aivlf~~~   81 (166)
                      +.+-.++.--+++.++||-+-.+.++..  .+.|++++..+.+=+..||..++++..++
T Consensus       116 ~~~~~~~~~gw~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvf  174 (388)
T 1zcd_A          116 NYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALF  174 (388)
T ss_dssp             CCSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCChhhhhhhHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333456677888999999999999875  45799999999999999999999988776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005