Psyllid ID: psy13585


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
MCANLSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSPSES
cccHHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHcccccccEEEcccccHHHHcccccEEEEEEcccccccccccccccEEEEEcccccccccc
ccccccHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHccccccEEEEEEEccHHHcccHHHHHHHHHHccccHHHEEEEccccHHHHcccccEEEEEEEcccccccHHHHHHHHEEEEcccccccccc
mcanlsiadfltqskhlsenpspcdtihvvlgnescdldSAVSAILYAYFLVCNgdmrvlpmlnipqkqlpikTEVVYFLQENSIclenlifrdsinleqlsqsgklkvTLVDHHvlanqdkflKPYVIEildhrpvspses
MCANLSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILdhrpvspses
MCANLSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSPSES
***********************CDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILD*********
****LSI*DFLTQSKHL****SPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILD**P******
MCANLSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSPSES
****LSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHR*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MCANLSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSPSES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query142 2.2.26 [Sep-21-2011]
Q86TP1 453 Protein prune homolog OS= yes N/A 0.795 0.249 0.478 2e-25
Q6AYG3 454 Protein prune homolog OS= yes N/A 0.901 0.281 0.436 1e-24
Q8BIW1 454 Protein prune homolog OS= yes N/A 0.901 0.281 0.436 2e-24
Q5E9Y6 453 Protein prune homolog OS= yes N/A 0.781 0.245 0.495 4e-24
Q52KR3 3084 Protein prune homolog 2 O no N/A 0.894 0.041 0.403 1e-19
Q8WUY3 3088 Protein prune homolog 2 O no N/A 0.894 0.041 0.410 3e-19
O14094 384 Putative exopolyphosphata yes N/A 0.866 0.320 0.346 2e-08
P38698 397 Exopolyphosphatase OS=Sac yes N/A 0.887 0.317 0.317 1e-07
>sp|Q86TP1|PRUNE_HUMAN Protein prune homolog OS=Homo sapiens GN=PRUNE PE=1 SV=2 Back     alignment and function desciption
 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 80/115 (69%), Gaps = 2/115 (1%)

Query: 27  IHVVLGNESCDLDSAVSAILYAYFLVCNGDMR--VLPMLNIPQKQLPIKTEVVYFLQENS 84
           +HVVLGNE+CDLDS VSA+  A++L    +     +P+LNI + +LP++ ++V+FLQ+  
Sbjct: 18  LHVVLGNEACDLDSTVSALALAFYLAKTTEAEEVFVPVLNIKRSELPLRGDIVFFLQKVH 77

Query: 85  ICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSP 139
           I    LIFRD I+L  L Q+G+L + LVDHH+L+  D  L+  V E+LDHRP+ P
Sbjct: 78  IPESILIFRDEIDLHALYQAGQLTLILVDHHILSKSDTALEEAVAEVLDHRPIEP 132




Phosphodiesterase (PDE) that has higher activity toward cAMP than cGMP, as substrate. Plays a role in cell proliferation, is able to induce cell motility and acts as a negative regulator of NME1.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|Q6AYG3|PRUNE_RAT Protein prune homolog OS=Rattus norvegicus GN=Prune PE=2 SV=1 Back     alignment and function description
>sp|Q8BIW1|PRUNE_MOUSE Protein prune homolog OS=Mus musculus GN=Prune PE=2 SV=1 Back     alignment and function description
>sp|Q5E9Y6|PRUNE_BOVIN Protein prune homolog OS=Bos taurus GN=PRUNE PE=2 SV=1 Back     alignment and function description
>sp|Q52KR3|PRUN2_MOUSE Protein prune homolog 2 OS=Mus musculus GN=Prune2 PE=2 SV=2 Back     alignment and function description
>sp|Q8WUY3|PRUN2_HUMAN Protein prune homolog 2 OS=Homo sapiens GN=PRUNE2 PE=1 SV=3 Back     alignment and function description
>sp|O14094|PPX1_SCHPO Putative exopolyphosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.11 PE=3 SV=1 Back     alignment and function description
>sp|P38698|PPX1_YEAST Exopolyphosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PPX1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query142
307191883 382 Protein prune-like protein [Harpegnathos 1.0 0.371 0.473 5e-25
334324749 468 PREDICTED: protein prune homolog [Monode 0.915 0.277 0.470 2e-24
327290126 412 PREDICTED: protein prune homolog [Anolis 0.781 0.269 0.482 3e-24
91078956 366 PREDICTED: similar to PRUNEM1 [Tribolium 0.936 0.363 0.402 6e-24
224084314 422 PREDICTED: protein prune homolog [Taenio 0.781 0.263 0.482 1e-23
397492842 453 PREDICTED: protein prune homolog [Pan pa 0.795 0.249 0.478 1e-23
24308263 453 protein prune homolog [Homo sapiens] gi| 0.795 0.249 0.478 1e-23
410213504 453 prune homolog [Pan troglodytes] gi|41024 0.795 0.249 0.478 1e-23
4007408 453 PRUNE-like protein [Homo sapiens] 0.795 0.249 0.478 1e-23
343961809 453 prune homolog [Pan troglodytes] 0.795 0.249 0.478 1e-23
>gi|307191883|gb|EFN75302.1| Protein prune-like protein [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 94/150 (62%), Gaps = 8/150 (5%)

Query: 1   MCANLSIADFLTQSKHLSENPSPCDTIHVVLGNESCDLDSAVSAIL-----YAYFLVCN- 54
           M    ++  FL  SK    N S   TI VVLGN+SCDLDSAV A++     Y     C  
Sbjct: 1   MQTQGAMESFLNTSKVALSNLSLYQTIRVVLGNQSCDLDSAVCALVQGLSEYVNIKTCGQ 60

Query: 55  GDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQS--GKLKVTLV 112
            ++ V+P+LNIP+K   IKTEVVY+L+ + I    L FRD INL+ L  +   KL++ LV
Sbjct: 61  SNIAVIPVLNIPEKDYRIKTEVVYWLRFHDIPQNLLTFRDQINLQNLQSNTDKKLELILV 120

Query: 113 DHHVLANQDKFLKPYVIEILDHRPVSPSES 142
           DHH L+N+D  LKP VI+I+DHRP++P  S
Sbjct: 121 DHHTLSNEDIALKPLVIKIIDHRPLNPDWS 150




Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|334324749|ref|XP_001371249.2| PREDICTED: protein prune homolog [Monodelphis domestica] Back     alignment and taxonomy information
>gi|327290126|ref|XP_003229775.1| PREDICTED: protein prune homolog [Anolis carolinensis] Back     alignment and taxonomy information
>gi|91078956|ref|XP_974192.1| PREDICTED: similar to PRUNEM1 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|224084314|ref|XP_002194147.1| PREDICTED: protein prune homolog [Taeniopygia guttata] Back     alignment and taxonomy information
>gi|397492842|ref|XP_003817329.1| PREDICTED: protein prune homolog [Pan paniscus] Back     alignment and taxonomy information
>gi|24308263|ref|NP_067045.1| protein prune homolog [Homo sapiens] gi|229462737|sp|Q86TP1.2|PRUNE_HUMAN RecName: Full=Protein prune homolog; Short=hPrune; AltName: Full=Drosophila-related expressed sequence 17; Short=DRES-17; Short=DRES17; AltName: Full=HTcD37 gi|22137639|gb|AAH25304.1| Prune homolog (Drosophila) [Homo sapiens] gi|119573871|gb|EAW53486.1| prune homolog (Drosophila), isoform CRA_b [Homo sapiens] gi|123985899|gb|ABM83745.1| prune homolog (Drosophila) [synthetic construct] gi|123998950|gb|ABM87064.1| prune homolog (Drosophila) [synthetic construct] gi|189054753|dbj|BAG37575.1| unnamed protein product [Homo sapiens] gi|261860372|dbj|BAI46708.1| prune homolog [synthetic construct] Back     alignment and taxonomy information
>gi|410213504|gb|JAA03971.1| prune homolog [Pan troglodytes] gi|410249570|gb|JAA12752.1| prune homolog [Pan troglodytes] gi|410293980|gb|JAA25590.1| prune homolog [Pan troglodytes] gi|410331367|gb|JAA34630.1| prune homolog [Pan troglodytes] Back     alignment and taxonomy information
>gi|4007408|gb|AAC95290.1| PRUNE-like protein [Homo sapiens] Back     alignment and taxonomy information
>gi|343961809|dbj|BAK62492.1| prune homolog [Pan troglodytes] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query142
UNIPROTKB|Q86TP1 453 PRUNE "Protein prune homolog" 0.795 0.249 0.478 2.7e-24
RGD|1359521 454 Prune "prune homolog (Drosophi 0.887 0.277 0.442 1.3e-23
MGI|MGI:1925152 454 Prune "prune homolog (Drosophi 0.887 0.277 0.442 1.7e-23
UNIPROTKB|Q5E9Y6 453 PRUNE "Protein prune homolog" 0.781 0.245 0.495 6.1e-23
UNIPROTKB|E2RTD5 453 PRUNE "Uncharacterized protein 0.781 0.245 0.486 1.3e-22
UNIPROTKB|F1SS99 453 PRUNE "Uncharacterized protein 0.781 0.245 0.486 1.3e-22
ZFIN|ZDB-GENE-100609-1 447 prune "prune homolog (Drosophi 0.880 0.279 0.419 3.5e-22
UNIPROTKB|H9KZ13168 LOC100857290 "Uncharacterized 0.753 0.636 0.472 4.3e-22
UNIPROTKB|Q8WUY3 3088 PRUNE2 "Protein prune homolog 0.929 0.042 0.411 3.2e-19
UNIPROTKB|E2RN40 3068 PRUNE2 "Uncharacterized protei 0.922 0.042 0.407 5.2e-19
UNIPROTKB|Q86TP1 PRUNE "Protein prune homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 281 (104.0 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 55/115 (47%), Positives = 80/115 (69%)

Query:    27 IHVVLGNESCDLDSAVSAILYAYFLVCNGDMR--VLPMLNIPQKQLPIKTEVVYFLQENS 84
             +HVVLGNE+CDLDS VSA+  A++L    +     +P+LNI + +LP++ ++V+FLQ+  
Sbjct:    18 LHVVLGNEACDLDSTVSALALAFYLAKTTEAEEVFVPVLNIKRSELPLRGDIVFFLQKVH 77

Query:    85 ICLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSP 139
             I    LIFRD I+L  L Q+G+L + LVDHH+L+  D  L+  V E+LDHRP+ P
Sbjct:    78 IPESILIFRDEIDLHALYQAGQLTLILVDHHILSKSDTALEEAVAEVLDHRPIEP 132




GO:0030145 "manganese ion binding" evidence=IEA
GO:0004427 "inorganic diphosphatase activity" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
GO:0005925 "focal adhesion" evidence=IEA
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
RGD|1359521 Prune "prune homolog (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1925152 Prune "prune homolog (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E9Y6 PRUNE "Protein prune homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RTD5 PRUNE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SS99 PRUNE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-100609-1 prune "prune homolog (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|H9KZ13 LOC100857290 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WUY3 PRUNE2 "Protein prune homolog 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RN40 PRUNE2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query142
COG1227 311 COG1227, PPX1, Inorganic pyrophosphatase/exopolyph 3e-06
pfam01368156 pfam01368, DHH, DHH family 4e-05
>gnl|CDD|224148 COG1227, PPX1, Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion] Back     alignment and domain information
 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 17/107 (15%)

Query: 30  VLGNESCDLDSAVSAILYAYFLVCNGDMRVLP-MLNIPQKQLPIKTEVVYFLQENSICLE 88
           V+G+E+ D DS  SAI+YAY L   G+       L  P  +     +  YF  E    +E
Sbjct: 6   VVGHENPDTDSIASAIVYAYLLNAYGEFEAKAVRLGEPNLETAFVLD--YFGVEAPKLVE 63

Query: 89  NLIFRDSINLEQLSQSGKLKVTLVDHHVLA-NQDKFLKPYVIEILDH 134
           ++              G+ KV LVDH+    + D      ++ I+DH
Sbjct: 64  SV-------------KGEKKVILVDHNEFQQSVDDIEDAEILGIIDH 97


Length = 311

>gnl|CDD|216459 pfam01368, DHH, DHH family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query142
2qb6_A 397 Saccharomyces Cerevisiae Cytosolic Exopolyphosphata 1e-08
>pdb|2QB6|A Chain A, Saccharomyces Cerevisiae Cytosolic Exopolyphosphatase, Sulfate Complex Length = 397 Back     alignment and structure

Iteration: 1

Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 79/145 (54%), Gaps = 19/145 (13%) Query: 6 SIADFLTQSKHLS-ENPSPCDTIHVVLGNESCDLDSAVSAILYAY--FLVCNGDMR---- 58 ++ +FL K L + D + + +GNES D+DS SAI Y+Y ++ G Sbjct: 7 TVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKK 66 Query: 59 ----VLPMLNIPQKQLPIKTEVVYFLQENSICLENLIF-RDSINLEQ-LSQSGKLKVTLV 112 ++P+++IP++ L ++ +V+Y L++ I E L F D +L+Q +SQ +L LV Sbjct: 67 KGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLV 126 Query: 113 DHHVLANQDKFLKPY---VIEILDH 134 D++ + K LK Y V+ I+DH Sbjct: 127 DNN---DTPKNLKNYIDNVVGIIDH 148

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query142
2qb7_A 397 Exopolyphosphatase; A/B/A structure, DHH family ph 3e-27
2eb0_A 307 Manganese-dependent inorganic pyrophosphatase; DHH 4e-13
1k20_A 310 Manganese-dependent inorganic pyrophosphatase; fam 3e-10
2haw_A 309 Manganese-dependent inorganic pyrophosphatase; sub 1e-08
>2qb7_A Exopolyphosphatase; A/B/A structure, DHH family phosphatase, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2qb6_A 2qb8_A* Length = 397 Back     alignment and structure
 Score =  103 bits (257), Expect = 3e-27
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 6   SIADFLTQSK-HLSENPSPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNG--------- 55
           ++ +FL   K       +  D + + +GNES D+DS  SAI Y+Y               
Sbjct: 7   TVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKK 66

Query: 56  -DMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSIN--LEQLSQSGKLKVTLV 112
               ++P+++IP++ L ++ +V+Y L++  I  E L F + +    + +SQ  +L   LV
Sbjct: 67  KGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLV 126

Query: 113 DHHVLANQDKFLKPYVIEILDHRP 136
           D++      K     V+ I+DH  
Sbjct: 127 DNNDTPKNLKNYIDNVVGIIDHHF 150


>2eb0_A Manganese-dependent inorganic pyrophosphatase; DHH domain, DHHA2 domain, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii} Length = 307 Back     alignment and structure
>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A Length = 310 Back     alignment and structure
>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A* Length = 309 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query142
2qb7_A 397 Exopolyphosphatase; A/B/A structure, DHH family ph 99.93
2haw_A 309 Manganese-dependent inorganic pyrophosphatase; sub 99.69
1k20_A 310 Manganese-dependent inorganic pyrophosphatase; fam 99.68
2eb0_A 307 Manganese-dependent inorganic pyrophosphatase; DHH 99.66
1wpn_A188 Manganese-dependent inorganic pyrophosphatase; met 99.57
3dev_A 320 SH1221; alpha-beta protein., structural genomics, 98.85
3dma_A 343 Exopolyphosphatase-related protein; structural gen 98.45
2zxr_A 666 Single-stranded DNA specific exonuclease RECJ; DNA 95.04
>2qb7_A Exopolyphosphatase; A/B/A structure, DHH family phosphatase, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2qb6_A 2qb8_A* Back     alignment and structure
Probab=99.93  E-value=1.6e-26  Score=194.35  Aligned_cols=135  Identities=30%  Similarity=0.489  Sum_probs=110.6

Q ss_pred             hHHHHHHHHhhhhcCC-CCCCCeEEEeCCCCCCHHHHHHHHHHHHHHhcCC----------CCceEecccccCcCCCCCh
Q psy13585          6 SIADFLTQSKHLSENP-SPCDTIHVVLGNESCDLDSAVSAILYAYFLVCNG----------DMRVLPMLNIPQKQLPIKT   74 (142)
Q Consensus         6 ~l~~FL~~~k~~l~~~-~~~~~~~iV~Gnes~DlDSivSAi~~Ay~~~~~~----------~~~~vPvini~r~~~~lr~   74 (142)
                      +|++||+++|+++.+. .+....++|+||++||+||++|||+|||++.+.+          ...++|++|+||.++++++
T Consensus         7 ~l~~fl~~~~~~l~~~~~~~~~~iiV~gH~~pD~DaigSalala~~l~~~gk~~~~~~~~~~~~~v~v~~~~r~~~~~~~   86 (397)
T 2qb7_A            7 TVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRR   86 (397)
T ss_dssp             CHHHHHHHHHHSCHHHHSBTTEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHSGGGSSSCCCCCCEEECSSCGGGGGGCH
T ss_pred             HHHHHHHHHHHHHhhhccCCCCeEEEeCCCCCCHHHHHHHHHHHHHHHhcCCccccccccCCccEEEEEcccccccccCH
Confidence            4999999999987653 4677899999999999999999999999986542          2357999999999999999


Q ss_pred             HHHHHHHHcCCCCCceeeccccc-h-hhhccCCCceEEEecCCCCCcccCCCCCceEEEeccCCCCCC
Q psy13585         75 EVVYFLQENSICLENLIFRDSIN-L-EQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVSPS  140 (142)
Q Consensus        75 E~~~~L~~~gi~~~~L~f~ddi~-~-~~l~~~~~~~v~LVDhn~l~~~~~~~~~~V~~IIDHH~~~~~  140 (142)
                      |+.++|+.++++.+.++|.+++. + ..+.......++|||||.+++....+...++.|||||+.++.
T Consensus        87 e~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vilVD~~~~~r~~~~~~~~~~~iIDHH~~~~~  154 (397)
T 2qb7_A           87 DVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQK  154 (397)
T ss_dssp             HHHHHHHHTTCCGGGSCCHHHHHHHHHHSCTTCEEEEEEESCSSCCGGGTTTCCEEEEEEECSCCCCC
T ss_pred             HHHHHHHHcCCChhhcccHHHHHHHHHhhcccCCCeEEEecCCCcccCcccccccEEEEEcCCCCCCC
Confidence            99999999999999998876652 0 112112234799999999988665567889999999998654



>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A* Back     alignment and structure
>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A Back     alignment and structure
>2eb0_A Manganese-dependent inorganic pyrophosphatase; DHH domain, DHHA2 domain, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1 Back     alignment and structure
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus} Back     alignment and structure
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis} Back     alignment and structure
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 142
d1wpna_187 c.107.1.1 (A:) Manganese-dependent inorganic pyrop 3e-04
d1k20a_ 310 c.107.1.1 (A:) Manganese-dependent inorganic pyrop 7e-04
>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]} Length = 187 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Manganese-dependent inorganic pyrophosphatase (family II)
domain: Manganese-dependent inorganic pyrophosphatase (family II)
species: Bacillus subtilis [TaxId: 1423]
 Score = 37.1 bits (85), Expect = 3e-04
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 19/113 (16%)

Query: 29  VVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFL---QENSI 85
           ++ G+++ D D+  SAI YA                    +L    E V       E   
Sbjct: 4   LIFGHQNPDTDTICSAIAYADLK----------------NKLGFNAEPVRLGQVNGETQY 47

Query: 86  CLENLIFRDSINLEQLSQSGKLKVTLVDHHVLANQDKFLKPYVIEILDHRPVS 138
            L+         +E  +      + +  +    +     +  V+E++DH  ++
Sbjct: 48  ALDYFKQESPRLVETAANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIA 100


>d1k20a_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Streptococcus gordonii [TaxId: 1302]} Length = 310 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query142
d1k20a_ 310 Manganese-dependent inorganic pyrophosphatase (fam 99.84
d1wpna_187 Manganese-dependent inorganic pyrophosphatase (fam 99.66
>d1k20a_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Streptococcus gordonii [TaxId: 1302]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Manganese-dependent inorganic pyrophosphatase (family II)
domain: Manganese-dependent inorganic pyrophosphatase (family II)
species: Streptococcus gordonii [TaxId: 1302]
Probab=99.84  E-value=3.2e-21  Score=156.19  Aligned_cols=101  Identities=19%  Similarity=0.219  Sum_probs=81.4

Q ss_pred             eEEEeCCCCCCHHHHHHHHHHHHHHhcCCCCceEecccccCcCCCCChHHHHHHHHcCCCCCceeeccccchhhhccCCC
Q psy13585         27 IHVVLGNESCDLDSAVSAILYAYFLVCNGDMRVLPMLNIPQKQLPIKTEVVYFLQENSICLENLIFRDSINLEQLSQSGK  106 (142)
Q Consensus        27 ~~iV~Gnes~DlDSivSAi~~Ay~~~~~~~~~~vPvini~r~~~~lr~E~~~~L~~~gi~~~~L~f~ddi~~~~l~~~~~  106 (142)
                      -++|+||++||+||++|||+|||++.+..+..+.|+     ..+.+++|+.|+|++++++.+.+++..+.       ...
T Consensus         2 kIlV~GH~~pD~DsigSalala~~l~~~~g~~~~~~-----~~~~~~~e~~~~l~~~~i~~~~li~~~~~-------~~~   69 (310)
T d1k20a_           2 KILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAV-----ALGEPNEETAFVLDYFGVAAPRVITSAKA-------EGA   69 (310)
T ss_dssp             CEEEECCSSCCHHHHHHHHHHHHHHHHHHCCCEEEC-----BSSCCCHHHHHHHHHHTCCCCCBCSCTGG-------GTC
T ss_pred             cEEEECCCCCChHHHHHHHHHHHHHHHhCCCCeEEE-----ECCCCChHHHHHHHhcCCcchhhhhhhcc-------ccC
Confidence            368999999999999999999999865423445554     36678999999999999999998876432       124


Q ss_pred             ceEEEecCCCCCcccCCC-CCceEEEeccCCCCC
Q psy13585        107 LKVTLVDHHVLANQDKFL-KPYVIEILDHRPVSP  139 (142)
Q Consensus       107 ~~v~LVDhn~l~~~~~~~-~~~V~~IIDHH~~~~  139 (142)
                      ..++|||||.+++....+ .++|++|||||++++
T Consensus        70 ~~vilVDhn~~~~~~~~~~~~~v~~iIDHH~~~~  103 (310)
T d1k20a_          70 EQVILTDHNEFQQSVADIAEVEVYGVVDHHRVAN  103 (310)
T ss_dssp             SEEEEESCCCGGGSCTTGGGSEEEEEEECSCCCS
T ss_pred             ceEEEcCCCChhhhhhhHhhcceEEEEEecccCC
Confidence            579999999998876655 478999999998764



>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure