Psyllid ID: psy135

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
MENAENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITRSHSAMVESTSSYVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
ccccccccccccHHHHHHHHHHcccccHHHHHHHcccccHHHHHcccHHHHcccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHccc
ccccHHHEEEccHHHHHHHHHHcccHHHHHHHHHcccccHHHHHEccHHHcccccccEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEccccccccccccccccccHHHHHHHHHHHHHHHcccccEccccccccHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHEHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccc
MENAENFVLDWTSEQVANWLtqkghgkyapllcdqhrldgrglfllheedlksppisieILGDIKRIIYDIESFKKEIHNdirdrgydprslVKITRshsamvestssyvsrevvviprgnfkvqdnilkpeLVKMVVAAVYLFVVSWILAFVMVIVHdrvpdmkkypplpdifldniplvpwAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITslsvpgehiecsprtysdQSIRQKLEEAFIIWKgaglsiqgintcgdylfsghtTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANnqalyqkdshrvriWFPLFgylessmtrrvpneyhTLGEIFVYVMKKIKQLMIIVRNMIIPM
MENAENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLheedlksppisieilgDIKRIIYDIESFKKEihndirdrgydprSLVKITRshsamvestssyvsrevvviprgnfkvqdnilkPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITslsvpgehiecsprtysdQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
MENAENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITRSHSAMVESTSSYVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
*****NFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITR****MV*STSSYVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMII**
*****NF***WTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISI**LGDIKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITRSHSAMVESTSSYVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
MENAENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITRS**********YVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
***AENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIRDR*********************SSYVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
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MENAENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITRSHSAMVESTSSYVSREVVVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVITSLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVYVMKKIKQLMIIVRNMIIPM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query418 2.2.26 [Sep-21-2011]
Q9DA37478 Sphingomyelin synthase-re yes N/A 0.892 0.780 0.487 1e-107
Q96LT4415 Sphingomyelin synthase-re yes N/A 0.892 0.898 0.484 1e-106
Q9VS60 600 Sphingomyelin synthase-re yes N/A 0.944 0.658 0.453 3e-99
Q20696483 Sphingomyelin synthase-re yes N/A 0.889 0.770 0.415 5e-89
Q86VZ5419 Phosphatidylcholine:ceram no N/A 0.892 0.890 0.334 1e-58
Q8VCQ6419 Phosphatidylcholine:ceram no N/A 0.882 0.880 0.330 1e-58
A0AAS4418 Phosphatidylcholine:ceram no N/A 0.889 0.889 0.338 2e-58
Q7T3T4417 Phosphatidylcholine:ceram no N/A 0.894 0.896 0.337 6e-58
Q7TSX5419 Phosphatidylcholine:ceram no N/A 0.870 0.868 0.334 8e-58
Q4JM44365 Phosphatidylcholine:ceram no N/A 0.612 0.701 0.417 1e-52
>sp|Q9DA37|SAMD8_MOUSE Sphingomyelin synthase-related protein 1 OS=Mus musculus GN=Samd8 PE=2 SV=1 Back     alignment and function desciption
 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/396 (48%), Positives = 268/396 (67%), Gaps = 23/396 (5%)

Query: 11  WTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYD 70
           WT++ VA WL  +G  +Y  +LC++HRLDG  L  L E DL+SPP+ I++LGDIKR++  
Sbjct: 75  WTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRLMLS 134

Query: 71  IESFKKEIHNDI-RDRGYDPRSLVKITRSHSAMVESTSSYVSREVV-----VIP------ 118
           +   +K IH D+  + GY+  S +       + ++S     + E        IP      
Sbjct: 135 VRKLQK-IHTDVLEEMGYNSDSPMSPMTPFLSALQSADWLCNGEPTHSCDGPIPDLSSDQ 193

Query: 119 ----RGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIF 174
                G  K     L PE  K +++ VY+F+V    +F+MVIVH+RVPDM+ YPPLPDIF
Sbjct: 194 YQYMNGKNKHSARRLDPEYWKTILSCVYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIF 253

Query: 175 LDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVIT 234
           LD++P +PWAF ++E+CG +L +IWI V + HKHR+ILLRR  +L+GT +LLR  T+ +T
Sbjct: 254 LDSVPRIPWAFSMTEVCGVILCYIWILVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVT 313

Query: 235 SLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFL 294
           SLSVPG+H++C+ + Y   S+ +KL  AF IW G G+++ G++TCGDY+FSGHT  +T L
Sbjct: 314 SLSVPGQHLQCTGKIYG--SVWEKLRRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTML 371

Query: 295 NFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSL 354
           NFF+TEYTP +  F  LH L+WV+N+  I  ILA+HEHYSIDVFIAFYIT+RLFLYYH+L
Sbjct: 372 NFFVTEYTPRSWNF--LHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYYHTL 429

Query: 355 ANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEY 390
           AN +A +Q  S R RIWFP+F + E ++   VPNEY
Sbjct: 430 ANTRAYHQ--SRRARIWFPMFSFFECNVNGTVPNEY 463

Mus musculus (taxid: 10090)
>sp|Q96LT4|SAMD8_HUMAN Sphingomyelin synthase-related protein 1 OS=Homo sapiens GN=SAMD8 PE=1 SV=2 Back     alignment and function description
>sp|Q9VS60|SMSR1_DROME Sphingomyelin synthase-related 1 OS=Drosophila melanogaster GN=SMSr PE=1 SV=2 Back     alignment and function description
>sp|Q20696|SMSR1_CAEEL Sphingomyelin synthase-related 1 OS=Caenorhabditis elegans GN=F53B1.2 PE=3 SV=1 Back     alignment and function description
>sp|Q86VZ5|SMS1_HUMAN Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Homo sapiens GN=SGMS1 PE=1 SV=2 Back     alignment and function description
>sp|Q8VCQ6|SMS1_MOUSE Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Mus musculus GN=Sgms1 PE=1 SV=2 Back     alignment and function description
>sp|A0AAS4|SMS1_PIG Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Sus scrofa GN=SGMS1 PE=2 SV=2 Back     alignment and function description
>sp|Q7T3T4|SMS1_CHICK Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Gallus gallus GN=SGMS1 PE=2 SV=2 Back     alignment and function description
>sp|Q7TSX5|SMS1_RAT Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Rattus norvegicus GN=Sgms1 PE=2 SV=2 Back     alignment and function description
>sp|Q4JM44|SMS2_RAT Phosphatidylcholine:ceramide cholinephosphotransferase 2 OS=Rattus norvegicus GN=Sgms2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query418
328776353443 PREDICTED: sphingomyelin synthase-relate 0.947 0.893 0.483 1e-112
307202425444 Sphingomyelin synthase-related 1 [Harpeg 0.968 0.912 0.504 1e-111
380026795442 PREDICTED: sphingomyelin synthase-relate 0.968 0.916 0.498 1e-111
189237334 1121 PREDICTED: similar to AGAP005884-PA, par 0.944 0.352 0.489 1e-110
321460193444 hypothetical protein DAPPUDRAFT_201906 [ 0.901 0.849 0.496 1e-110
270006596445 hypothetical protein TcasGA2_TC010470 [T 0.944 0.887 0.489 1e-110
307180378443 Sphingomyelin synthase-related 1 [Campon 0.913 0.862 0.525 1e-110
350413545442 PREDICTED: sphingomyelin synthase-relate 0.968 0.916 0.496 1e-110
340710124442 PREDICTED: sphingomyelin synthase-relate 0.968 0.916 0.494 1e-110
241618061388 conserved hypothetical protein [Ixodes s 0.892 0.961 0.510 1e-109
>gi|328776353|ref|XP_396152.4| PREDICTED: sphingomyelin synthase-related 1 [Apis mellifera] Back     alignment and taxonomy information
 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/436 (48%), Positives = 282/436 (64%), Gaps = 40/436 (9%)

Query: 4   AENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGD 63
           +E  +++WT + VA WL++ GH K+  L  DQ  +DG+ L  L E+DLK   ++I+ +GD
Sbjct: 2   SEKNIIEWTQKDVAKWLSESGHEKFVDLFFDQ-EIDGKVLLTLKEDDLKLISMNIKKIGD 60

Query: 64  IKRIIYDIESFKKEIHNDIRDRGYDPRSLVKITRSHSAMVESTSSYVSREVVVIPRGNFK 123
           IKR+   I+  ++     + + GY               +  +S++ S     +P     
Sbjct: 61  IKRLYISIKQLQRANMAVLFELGY-------------VDIFPSSNFFSHHKHEMPSSGIN 107

Query: 124 VQDNI-----------------LKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKK 166
            + +I                 L PE+ K  ++  YLF+V+WI AFVMVIVHDRVPDMKK
Sbjct: 108 NEGSIEHEFYSASMSEDGHASHLPPEIWKAFISLAYLFIVTWITAFVMVIVHDRVPDMKK 167

Query: 167 YPPLPDIFLDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLL 226
           YPPLPDIFLDN+P +PWAF + E+ GT+L  IW+ V IFHK+R ILLRRFFAL GT +LL
Sbjct: 168 YPPLPDIFLDNVPHIPWAFDMCEVTGTILFAIWLIVLIFHKYRFILLRRFFALSGTVFLL 227

Query: 227 RSVTVVITSLSVPGEHIECSPRTYSDQ-------SIRQKLEEAFIIWKGAGLSIQGINTC 279
           R VT++ITSLSVPG H++C PR   +         +  K+  A++IW+GAG+SIQG+ TC
Sbjct: 228 RCVTMLITSLSVPGAHLQCQPRKVPEDWTNSAYVELYNKIAMAYVIWRGAGMSIQGVRTC 287

Query: 280 GDYLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFI 339
           GDY+FSGHT A+T LNFFITEYTP     Y LH   W++N+  I  ILA+HEHYSIDVF+
Sbjct: 288 GDYMFSGHTVALTMLNFFITEYTPRQ--LYFLHTFTWMLNMFGIFFILAAHEHYSIDVFV 345

Query: 340 AFYITSRLFLYYHSLANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEYHTLGEIFVY 399
           AFYITSRLFLYYH+LANNQAL Q+DS+R RIWFPLF + ESS+   VPNEY +   I   
Sbjct: 346 AFYITSRLFLYYHTLANNQALMQRDSNRTRIWFPLFSFFESSVDGIVPNEYESPSLIICN 405

Query: 400 VMKKIKQLMIIVRNMI 415
           ++   K +  +VR+ I
Sbjct: 406 LVCTGKDIWHLVRSSI 421

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307202425|gb|EFN81845.1| Sphingomyelin synthase-related 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|380026795|ref|XP_003697128.1| PREDICTED: sphingomyelin synthase-related 1-like [Apis florea] Back     alignment and taxonomy information
>gi|189237334|ref|XP_973749.2| PREDICTED: similar to AGAP005884-PA, partial [Tribolium castaneum] Back     alignment and taxonomy information
>gi|321460193|gb|EFX71238.1| hypothetical protein DAPPUDRAFT_201906 [Daphnia pulex] Back     alignment and taxonomy information
>gi|270006596|gb|EFA03044.1| hypothetical protein TcasGA2_TC010470 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307180378|gb|EFN68404.1| Sphingomyelin synthase-related 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|350413545|ref|XP_003490025.1| PREDICTED: sphingomyelin synthase-related 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340710124|ref|XP_003393646.1| PREDICTED: sphingomyelin synthase-related 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|241618061|ref|XP_002408294.1| conserved hypothetical protein [Ixodes scapularis] gi|215502961|gb|EEC12455.1| conserved hypothetical protein [Ixodes scapularis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query418
MGI|MGI:1914880478 Samd8 "sterile alpha motif dom 0.892 0.780 0.494 5.4e-102
UNIPROTKB|F1NI82417 SAMD8 "Uncharacterized protein 0.892 0.894 0.489 1.8e-101
UNIPROTKB|Q96LT4415 SAMD8 "Sphingomyelin synthase- 0.889 0.896 0.491 1e-100
UNIPROTKB|F1S2F8478 SAMD8 "Uncharacterized protein 0.892 0.780 0.479 1e-100
UNIPROTKB|F1MYS1421 SAMD8 "Uncharacterized protein 0.892 0.885 0.482 1.3e-100
RGD|1306447478 Samd8 "sterile alpha motif dom 0.892 0.780 0.487 1.7e-100
ZFIN|ZDB-GENE-080219-27409 zgc:175139 "zgc:175139" [Danio 0.901 0.921 0.475 1e-98
ZFIN|ZDB-GENE-070410-30412 zgc:162183 "zgc:162183" [Danio 0.894 0.907 0.469 2.7e-93
FB|FBgn0052380 600 SMSr "SMSr" [Drosophila melano 0.944 0.658 0.453 6.3e-92
WB|WBGene00018735483 F53B1.2 [Caenorhabditis elegan 0.703 0.608 0.471 2.1e-88
MGI|MGI:1914880 Samd8 "sterile alpha motif domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 196/396 (49%), Positives = 271/396 (68%)

Query:    11 WTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYD 70
             WT++ VA WL  +G  +Y  +LC++HRLDG  L  L E DL+SPP+ I++LGDIKR++  
Sbjct:    75 WTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRLMLS 134

Query:    71 IESFKKEIHNDI-RDRGYDPRS-LVKITRSHSAMV--------ESTSSY------VSREV 114
             +   +K IH D+  + GY+  S +  +T   SA+         E T S       +S + 
Sbjct:   135 VRKLQK-IHTDVLEEMGYNSDSPMSPMTPFLSALQSADWLCNGEPTHSCDGPIPDLSSDQ 193

Query:   115 VVIPRGNFKVQDNILKPELVKMVVAAVYLFVVSWILAFVMVIVHDRVPDMKKYPPLPDIF 174
                  G  K     L PE  K +++ VY+F+V    +F+MVIVH+RVPDM+ YPPLPDIF
Sbjct:   194 YQYMNGKNKHSARRLDPEYWKTILSCVYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIF 253

Query:   175 LDNIPLVPWAFKLSEICGTLLMFIWISVCIFHKHRTILLRRFFALLGTAYLLRSVTVVIT 234
             LD++P +PWAF ++E+CG +L +IWI V + HKHR+ILLRR  +L+GT +LLR  T+ +T
Sbjct:   254 LDSVPRIPWAFSMTEVCGVILCYIWILVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVT 313

Query:   235 SLSVPGEHIECSPRTYSDQSIRQKLEEAFIIWKGAGLSIQGINTCGDYLFSGHTTAVTFL 294
             SLSVPG+H++C+ + Y   S+ +KL  AF IW G G+++ G++TCGDY+FSGHT  +T L
Sbjct:   314 SLSVPGQHLQCTGKIYG--SVWEKLRRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTML 371

Query:   295 NFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSL 354
             NFF+TEYTP +  F  LH L+WV+N+  I  ILA+HEHYSIDVFIAFYIT+RLFLYYH+L
Sbjct:   372 NFFVTEYTPRSWNF--LHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYYHTL 429

Query:   355 ANNQALYQKDSHRVRIWFPLFGYLESSMTRRVPNEY 390
             AN +A +Q  S R RIWFP+F + E ++   VPNEY
Sbjct:   430 ANTRAYHQ--SRRARIWFPMFSFFECNVNGTVPNEY 463
GO:0003674 "molecular_function" evidence=ND
GO:0005783 "endoplasmic reticulum" evidence=IEA
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0006665 "sphingolipid metabolic process" evidence=IEA
GO:0006686 "sphingomyelin biosynthetic process" evidence=NAS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=NAS
GO:0016740 "transferase activity" evidence=IEA
GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISO
GO:0046513 "ceramide biosynthetic process" evidence=ISO
GO:2000303 "regulation of ceramide biosynthetic process" evidence=ISO
UNIPROTKB|F1NI82 SAMD8 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q96LT4 SAMD8 "Sphingomyelin synthase-related protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S2F8 SAMD8 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1MYS1 SAMD8 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1306447 Samd8 "sterile alpha motif domain containing 8" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080219-27 zgc:175139 "zgc:175139" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-30 zgc:162183 "zgc:162183" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0052380 SMSr "SMSr" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00018735 F53B1.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96LT4SAMD8_HUMANNo assigned EC number0.48480.89230.8987yesN/A
Q9DA37SAMD8_MOUSENo assigned EC number0.48730.89230.7803yesN/A
Q20696SMSR1_CAEELNo assigned EC number0.41580.88990.7701yesN/A
Q9VS60SMSR1_DROMENo assigned EC number0.45370.94490.6583yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.8LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query418
cd0951570 cd09515, SAM_SGMS1-like, SAM domain of sphingomyel 8e-25
pfam1436072 pfam14360, PAP2_C, PAP2 superfamily C-terminal 1e-24
cd0951472 cd09514, SAM_SGMS1, SAM domain of sphingomyelin sy 5e-07
cd0951371 cd09513, SAM_BAR, SAM domain of BAR subfamily 1e-06
pfam0053662 pfam00536, SAM_1, SAM domain (Sterile alpha motif) 7e-06
smart0045468 smart00454, SAM, Sterile alpha motif 2e-05
cd0948756 cd09487, SAM_superfamily, SAM (Sterile alpha motif 1e-04
cd0950169 cd09501, SAM_SARM1-like_repeat1, SAM domain ot SAR 8e-04
cd0951270 cd09512, SAM_Neurabin-like, SAM domain of SAM_Neur 0.004
cd0950765 cd09507, SAM_DGK-delta-eta, SAM domain of diacylgl 0.004
>gnl|CDD|188914 cd09515, SAM_SGMS1-like, SAM domain of sphingomyelin synthase related subfamily Back     alignment and domain information 
 Score = 96.2 bits (240), Expect = 8e-25
 Identities = 35/70 (50%), Positives = 50/70 (71%)

Query: 8  VLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRI 67
          V +WT E VA WL ++G  KY  LLC++HR+DG+ L  L EEDL+SPP+ I++LGDIKR+
Sbjct: 1  VHEWTCEDVAKWLKKEGFSKYVDLLCNKHRIDGKVLLSLTEEDLRSPPLEIKVLGDIKRL 60

Query: 68 IYDIESFKKE 77
             I   +++
Sbjct: 61 WLAIRKLQRQ 70

SAM (sterile alpha motif) domain of SGMS-like (sphingomyelin synthase) subfamily is a potential protein-protein interaction domain. This group of proteins is related to sphingomyelin synthase 1, and contains an N-terminal SAM domain. The function of SGMS1-like proteins is unknown; they may play a role in sphingolipid metabolism. Length = 70
>gnl|CDD|206528 pfam14360, PAP2_C, PAP2 superfamily C-terminal Back     alignment and domain information
>gnl|CDD|188913 cd09514, SAM_SGMS1, SAM domain of sphingomyelin synthase Back     alignment and domain information
>gnl|CDD|188912 cd09513, SAM_BAR, SAM domain of BAR subfamily Back     alignment and domain information
>gnl|CDD|215981 pfam00536, SAM_1, SAM domain (Sterile alpha motif) Back     alignment and domain information
>gnl|CDD|197735 smart00454, SAM, Sterile alpha motif Back     alignment and domain information
>gnl|CDD|188886 cd09487, SAM_superfamily, SAM (Sterile alpha motif ) Back     alignment and domain information
>gnl|CDD|188900 cd09501, SAM_SARM1-like_repeat1, SAM domain ot SARM1-like proteins, repeat 1 Back     alignment and domain information
>gnl|CDD|188911 cd09512, SAM_Neurabin-like, SAM domain of SAM_Neurabin-like subfamily Back     alignment and domain information
>gnl|CDD|188906 cd09507, SAM_DGK-delta-eta, SAM domain of diacylglycerol kinase delta and eta subunits Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query418
2d8c_A97 Phosphatidylcholine:ceramide cholinephosphotransfe 1e-20
1v85_A91 Similar to ring finger protein 36; apoptosis, neur 2e-12
3bq7_A81 Diacylglycerol kinase delta; SAM domain, polymeriz 3e-12
2gle_A74 Neurabin-1; SAM domain, scaffold, protein protein 2e-11
2f3n_A76 SH3 and multiple ankyrin repeat domains 3; postsyn 8e-11
2e8o_A103 SAM domain and HD domain-containing protein 1; cel 8e-10
2ean_A83 Connector enhancer of kinase suppressor of RAS 2; 6e-09
3bs5_B80 Connector enhancer of kinase suppressor of RAS 2; 2e-08
3bs5_A106 Protein aveugle; sterIle alpha motif, SAM domain, 2e-08
3bs7_A78 Protein aveugle; sterIle alpha motif (SAM) domain, 1e-07
3tad_C265 Liprin-beta-1; protein binding; 2.90A {Mus musculu 2e-07
1pk1_B89 Sex COMB on midleg CG9495-PA; hetero SAM domain, p 4e-07
1kw4_A89 Polyhomeotic; SAM domain, polycomb group, polymer, 4e-07
1wwv_A91 Connector enhancer of kinase suppressor of RAS 1; 4e-07
2ke7_A103 Ankyrin repeat and sterIle alpha motif domain- con 7e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
2eao_A99 Ephrin type-B receptor 1; cell-free protein synthe 1e-04
2kg5_A100 ARF-GAP, RHO-GAP domain, ANK repeat and PH domain- 1e-04
3k1r_B74 Usher syndrome type-1G protein; protein-protein co 1e-04
2lmr_A101 ODIN, ankyrin repeat and SAM domain-containing pro 2e-04
2k4p_A86 Phosphatidylinositol-3,4,5-trisphosphate 5- phosph 2e-04
1ucv_A81 Ephrin type-A receptor 8; receptor oligomerization 4e-04
3h8m_A90 Ephrin type-A receptor 7; SAM domain, kinase,struc 4e-04
1b4f_A82 EPHB2; SAM domain, EPH receptor, signal transducti 4e-04
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2 Length = 97 Back     alignment and structure
 Score = 85.2 bits (210), Expect = 1e-20
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 8  VLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRI 67
          V+ W+ ++VA+WL +    +Y   L       G+ L  L +ED K PP+      + +R+
Sbjct: 17 VVYWSPKKVADWLLENAMPEYCEPL---EHFTGQDLINLTQEDFKKPPLYRVSSDNGQRL 73

Query: 68 IYDIESFKKEIH 79
          +  IE+ K E H
Sbjct: 74 LDMIETLKMEHH 85
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 91 Back     alignment and structure
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens} Length = 81 Back     alignment and structure
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus} Length = 74 Back     alignment and structure
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A Length = 76 Back     alignment and structure
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103 Back     alignment and structure
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83 Back     alignment and structure
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens} Length = 80 Back     alignment and structure
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster} Length = 106 Back     alignment and structure
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster} Length = 78 Back     alignment and structure
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus} Length = 265 Back     alignment and structure
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A Length = 89 Back     alignment and structure
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A Length = 89 Back     alignment and structure
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2 Length = 91 Back     alignment and structure
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens} Length = 103 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens} Length = 100 Back     alignment and structure
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} Length = 74 Back     alignment and structure
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens} Length = 101 Back     alignment and structure
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B Length = 86 Back     alignment and structure
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2 Length = 81 Back     alignment and structure
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens} Length = 90 Back     alignment and structure
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A Length = 82 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query418
2d8c_A97 Phosphatidylcholine:ceramide cholinephosphotransfe 99.84
1v85_A91 Similar to ring finger protein 36; apoptosis, neur 99.73
3bs5_B80 Connector enhancer of kinase suppressor of RAS 2; 99.71
3bs7_A78 Protein aveugle; sterIle alpha motif (SAM) domain, 99.7
2e8o_A103 SAM domain and HD domain-containing protein 1; cel 99.69
2gle_A74 Neurabin-1; SAM domain, scaffold, protein protein 99.69
3bq7_A81 Diacylglycerol kinase delta; SAM domain, polymeriz 99.69
1kw4_A89 Polyhomeotic; SAM domain, polycomb group, polymer, 99.69
2ean_A83 Connector enhancer of kinase suppressor of RAS 2; 99.68
2f3n_A76 SH3 and multiple ankyrin repeat domains 3; postsyn 99.68
3bs5_A106 Protein aveugle; sterIle alpha motif, SAM domain, 99.67
1wwv_A91 Connector enhancer of kinase suppressor of RAS 1; 99.66
1pk1_B89 Sex COMB on midleg CG9495-PA; hetero SAM domain, p 99.62
1uqv_A85 STE50 protein; SAM, sterIle alpha motif, helical, 99.42
2kso_A82 Ephrin type-A receptor 2; SAM domain, heterodimer, 99.36
2e8n_A88 Ephrin type-A receptor 2; cell-free protein synthe 99.31
2eam_A80 Putative 47 kDa protein; cell-free protein synthes 99.3
1ow5_A85 Serine/threonine-protein kinase STE11; MAP kinase, 99.29
2ke7_A103 Ankyrin repeat and sterIle alpha motif domain- con 99.29
2qkq_A83 Ephrin type-B receptor 4; ATP-binding, glycoprotei 99.29
1ucv_A81 Ephrin type-A receptor 8; receptor oligomerization 99.27
2eap_A90 Lymphocyte cytosolic protein 2; cell-free protein 99.27
1b4f_A82 EPHB2; SAM domain, EPH receptor, signal transducti 99.27
2kg5_A100 ARF-GAP, RHO-GAP domain, ANK repeat and PH domain- 99.26
3h8m_A90 Ephrin type-A receptor 7; SAM domain, kinase,struc 99.26
2eao_A99 Ephrin type-B receptor 1; cell-free protein synthe 99.23
3k1r_B74 Usher syndrome type-1G protein; protein-protein co 99.23
3tad_C265 Liprin-beta-1; protein binding; 2.90A {Mus musculu 99.22
2k4p_A86 Phosphatidylinositol-3,4,5-trisphosphate 5- phosph 99.22
2dl0_A97 SAM and SH3 domain-containing protein 1; cell-free 99.22
1b0x_A94 Protein (EPHA4 receptor tyrosine kinase); protein 99.19
3hil_A82 Ephrin type-A receptor 1; ATP-binding, kinase, nuc 99.18
3kka_C86 Ephrin type-A receptor 2; ATP-binding, kinase, nuc 99.17
1x40_A91 ARAP2; ASAP-related protein2, GTPase activity, sig 99.16
2l5y_A150 Stromal interaction molecule 2; EF-hand, SAM domai 99.07
2lmr_A101 ODIN, ankyrin repeat and SAM domain-containing pro 99.03
2k60_A150 Protein (stromal interaction molecule 1); EF-hand, 99.0
2dkz_A84 Hypothetical protein LOC64762; cell-free protein s 98.99
1v38_A78 SAM-domain protein samsn-1; structural genomics, h 98.98
3sei_A149 Caskin-1; SAM domain, protein-protein interaction, 98.97
2kiv_A148 Ankyrin repeat and sterIle alpha motif domain- con 98.92
3sei_A149 Caskin-1; SAM domain, protein-protein interaction, 98.89
3tac_B334 Liprin-alpha-2; transferase-protein binding comple 98.85
3tad_C265 Liprin-beta-1; protein binding; 2.90A {Mus musculu 98.69
2d3d_A88 VTS1 protein; RNA binding, SAM domain, SRE hairpin 98.67
2es6_A101 VTS1P; SAM domain, protein structure, gene regulat 98.64
2kiv_A148 Ankyrin repeat and sterIle alpha motif domain- con 98.62
2b6g_A119 VTS1P; alpha-helix, pentaloop, hairpin, RNA bindin 98.54
2qar_B93 Telsam domain; polymer, crystallization modules, s 98.48
2y9u_A69 Tumor protein 63; apoptosis, sterIle alpha motif, 98.43
2y9t_A82 Tumor protein 63; apoptosis, sterIle alpha motif, 98.38
1oxj_A173 RNA-binding protein smaug; SAM domain, PHAT domain 98.16
1sv0_C82 Modulator of the activity of ETS CG15085-PA; alpha 97.96
1ji7_A89 ETS-related protein TEL1; helical polymer, transcr 97.96
3tac_B334 Liprin-alpha-2; transferase-protein binding comple 97.79
1wwu_A99 Hypothetical protein FLJ21935; structural genomics 97.53
2e8m_A99 Epidermal growth factor receptor kinase substrate 97.49
1x66_A98 Friend leukemia integration 1 transcription factor 97.23
1sxe_A97 Transcriptional regulator ERG; alpha helical, sign 97.18
1sv0_A85 ETS DNA-binding protein pokkuri; alpha-helix, 3(10 97.11
2e8p_A92 ELF3 protein; cell-free protein synthesis, protein 96.88
2dkx_A96 SAM pointed domain-containing ETS transcription fa 96.77
2ytu_A128 Friend leukemia integration 1 transcription factor 96.73
1sxd_A91 GA repeat binding protein, alpha; alpha helical, t 96.57
2jv3_A110 ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, M 96.44
3idw_A72 Actin cytoskeleton-regulatory complex protein SLA; 95.63
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 95.26
2qb0_B241 Telsam domain - lysozyme chimera; helical polymer, 95.21
1dxs_A80 P53-like transcription factor; P73 SAM-like domain 94.98
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 94.78
2h80_A81 STAR-related lipid transfer protein 13; helical bu 90.64
2dky_A91 RHO-GTPase-activating protein 7; cell-free protein 89.14
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2 Back     alignment and structure
Probab=99.84  E-value=6.5e-22  Score=164.97  Aligned_cols=82  Identities=28%  Similarity=0.489  Sum_probs=77.3

Q ss_pred             CccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhhccc
Q psy135            4 AENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIR   83 (418)
Q Consensus         4 ~~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~~~~   83 (418)
                      ...+|.+||+|||++||++.||++|++.|  +| |||++||.||++||+++||||+++|+||||+++|++||+++..+++
T Consensus        13 ~~~~v~~Ws~edV~~WL~~~Gl~~Y~~~F--~~-IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~~I~~L~~~~~~~~~   89 (97)
T 2d8c_A           13 TMKEVVYWSPKKVADWLLENAMPEYCEPL--EH-FTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEHHMEAH   89 (97)
T ss_dssp             CCSCCSSCCTTHHHHHHHHTTCTTTTTTT--TT-CCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHSCCCCC
T ss_pred             CCCchhhCCHHHHHHHHHHcCCHHHHHHH--Hc-CCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            35789999999999999999999999888  57 9999999999999999889999999999999999999999999999


Q ss_pred             ccCCC
Q psy135           84 DRGYD   88 (418)
Q Consensus        84 ~~g~~   88 (418)
                      ++|+.
T Consensus        90 ~~~~~   94 (97)
T 2d8c_A           90 KNSGP   94 (97)
T ss_dssp             CCCCC
T ss_pred             hcCCC
Confidence            98885
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Back     alignment and structure
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens} Back     alignment and structure
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster} Back     alignment and structure
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus} Back     alignment and structure
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens} Back     alignment and structure
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A Back     alignment and structure
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A Back     alignment and structure
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster} Back     alignment and structure
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2 Back     alignment and structure
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A Back     alignment and structure
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A Back     alignment and structure
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens} Back     alignment and structure
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A Back     alignment and structure
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens} Back     alignment and structure
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens} Back     alignment and structure
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2 Back     alignment and structure
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A Back     alignment and structure
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens} Back     alignment and structure
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} Back     alignment and structure
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus} Back     alignment and structure
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B Back     alignment and structure
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2 Back     alignment and structure
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A Back     alignment and structure
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0 Back     alignment and structure
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2 Back     alignment and structure
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens} Back     alignment and structure
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens} Back     alignment and structure
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens} Back     alignment and structure
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2 Back     alignment and structure
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A Back     alignment and structure
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens} Back     alignment and structure
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A Back     alignment and structure
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A Back     alignment and structure
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus} Back     alignment and structure
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A Back     alignment and structure
>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A Back     alignment and structure
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens} Back     alignment and structure
>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli} Back     alignment and structure
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A Back     alignment and structure
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens} Back     alignment and structure
>1oxj_A RNA-binding protein smaug; SAM domain, PHAT domain; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 a.118.1.13 Back     alignment and structure
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 Back     alignment and structure
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A Back     alignment and structure
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A Back     alignment and structure
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} Back     alignment and structure
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1 Back     alignment and structure
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A Back     alignment and structure
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1 Back     alignment and structure
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A* Back     alignment and structure
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli} Back     alignment and structure
>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} SCOP: a.60.1.2 PDB: 1cok_A Back     alignment and structure
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A Back     alignment and structure
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 418
d2d8ca185 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 { 1e-12
d1kw4a_70 a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaste 6e-08
d2f3na164 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat 9e-08
d1ucva_81 a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal 5e-07
d1pk3a163 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly 3e-06
d1v38a_78 a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (M 9e-06
d1b0xa_72 a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mou 1e-05
d1wwva178 a.60.1.2 (A:8-85) Connector enhancer of kinase sup 2e-05
d1b4fa_74 a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) 3e-05
d1ow5a_60 a.60.1.2 (A:) Serine/threonine-protein kinase ste1 1e-04
d1x40a178 a.60.1.2 (A:8-85) Centaurin-delta 1 (Arap2) {Human 2e-04
>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 85 Back     information, alignment and structure

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sphingomyelin synthase 1, SMS1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.8 bits (147), Expect = 1e-12
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 8  VLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRI 67
          V+ W+ ++VA+WL +    +Y   L       G+ L  L +ED K PP+      + +R+
Sbjct: 11 VVYWSPKKVADWLLENAMPEYCEPL---EHFTGQDLINLTQEDFKKPPLYRVSSDNGQRL 67

Query: 68 IYDIESFKKEIH 79
          +  IE+ K E H
Sbjct: 68 LDMIETLKMEHH 79
>d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]} Length = 70 Back     information, alignment and structure
>d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]} Length = 64 Back     information, alignment and structure
>d1ucva_ a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 81 Back     information, alignment and structure
>d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 63 Back     information, alignment and structure
>d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 78 Back     information, alignment and structure
>d1b0xa_ a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mouse (Mus musculus) [TaxId: 10090]} Length = 72 Back     information, alignment and structure
>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 78 Back     information, alignment and structure
>d1b4fa_ a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 74 Back     information, alignment and structure
>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 60 Back     information, alignment and structure
>d1x40a1 a.60.1.2 (A:8-85) Centaurin-delta 1 (Arap2) {Human(Homo sapiens) [TaxId: 9606]} Length = 78 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query418
d2d8ca185 Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculu 99.8
d1wwva178 Connector enhancer of kinase suppressor of Ras 1, 99.72
d2f3na164 Sh3 and multiple ankyrin repeat domains 3 (Shank3) 99.65
d1kw4a_70 Polyhomeotic {Drosophila melanogaster [TaxId: 7227 99.65
d1pk3a163 Polycomb protein Scm {Fruit fly (Drosophila melano 99.6
d1b4fa_74 EphB2 receptor {Human (Homo sapiens) [TaxId: 9606] 99.42
d1v38a_78 Sam-domain protein samsn-1 {Mouse (Mus musculus) [ 99.41
d1ow5a_60 Serine/threonine-protein kinase ste11 {Baker's yea 99.41
d1b0xa_72 EphA4 receptor tyrosine kinases {Mouse (Mus muscul 99.35
d1x40a178 Centaurin-delta 1 (Arap2) {Human(Homo sapiens) [Ta 99.35
d1ucva_81 Ephrin type-A receptor 8, C-terminal domain {Human 99.31
d1oxja162 RNA-binding protein Smaug {Drosophila melanogaster 99.29
d1dxsa_57 C-terminal domain of p73 {Human (Homo sapiens) [Ta 99.02
d1z1va170 Ste50p, N-terminal domain {Baker's yeast (Saccharo 97.93
d1sv0a_77 Ets DNA-binding protein pokkuri (Yan) {Fruit fly ( 97.34
d1ji7a_77 Etv6 transcription factor pointed domain (Tel SAM) 97.33
d1sv0c_82 Modulator of the activity of Ets (MAE, CG15085-PA) 97.1
d1sxea_97 Transcriptional regulator ERG {Human (Homo sapiens 96.97
d1sxda_91 GABP-alpha subunit {Mouse (Mus musculus) [TaxId: 1 96.9
d1rg6a_67 C-terminal domain of p63 {Human (Homo sapiens) [Ta 96.86
d2jv3a_110 Ets-1 transcription factor pointed domain {Mouse ( 96.73
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 93.69
d2dkya178 Deleted in liver cancer 1 protein, DLC-1 {Human (H 84.7
d2h80a171 Deleted in Liver Cancer 2, DLC2 {Human (Homo sapie 83.02
>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sphingomyelin synthase 1, SMS1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=7.3e-21  Score=153.07  Aligned_cols=80  Identities=28%  Similarity=0.493  Sum_probs=75.1

Q ss_pred             CCccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhhcc
Q psy135            3 NAENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDI   82 (418)
Q Consensus         3 ~~~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~~~   82 (418)
                      .+.++|.+||++||++||++.|+++|++.|   |+|||++|+.||++||+++||||.+.|+|++|+++|++||.+++.+.
T Consensus         6 ~~~~~V~~Ws~~dV~~WL~~~gl~~Y~~~F---~~IdG~~Ll~Lt~~dL~~~~Lgi~~~~~rk~il~~I~~Lk~~~~~~~   82 (85)
T d2d8ca1           6 RTMKEVVYWSPKKVADWLLENAMPEYCEPL---EHFTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEHHMEA   82 (85)
T ss_dssp             SCCSCCSSCCTTHHHHHHHHTTCTTTTTTT---TTCCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHSCCCC
T ss_pred             cccCChhhCCHHHHHHHHHHCcHHHHHHHH---HhccHHHHHHCCHHHHhhcCccCcChhHHHHHHHHHHHHHHHhhhhc
Confidence            356899999999999999999999999998   78999999999999999988999999999999999999999998877


Q ss_pred             ccc
Q psy135           83 RDR   85 (418)
Q Consensus        83 ~~~   85 (418)
                      |+|
T Consensus        83 ~~n   85 (85)
T d2d8ca1          83 HKN   85 (85)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            754
>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]} Back     information, alignment and structure
>d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1b4fa_ a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1b0xa_ a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x40a1 a.60.1.2 (A:8-85) Centaurin-delta 1 (Arap2) {Human(Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ucva_ a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oxja1 a.60.1.2 (A:594-655) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]} Back     information, alignment and structure
>d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z1va1 a.60.1.2 (A:33-102) Ste50p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sv0a_ a.60.1.1 (A:) Ets DNA-binding protein pokkuri (Yan) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ji7a_ a.60.1.1 (A:) Etv6 transcription factor pointed domain (Tel SAM) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sv0c_ a.60.1.1 (C:) Modulator of the activity of Ets (MAE, CG15085-PA) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1sxea_ a.60.1.1 (A:) Transcriptional regulator ERG {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sxda_ a.60.1.1 (A:) GABP-alpha subunit {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1rg6a_ a.60.1.2 (A:) C-terminal domain of p63 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
>d2dkya1 a.60.1.3 (A:8-85) Deleted in liver cancer 1 protein, DLC-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h80a1 a.60.1.3 (A:11-81) Deleted in Liver Cancer 2, DLC2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure