Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value
Query 112
pfam00211 184
pfam00211, Guanylate_cyc, Adenylate and Guanylate
4e-26
cd07302 177
cd07302, CHD, cyclase homology domain
1e-23
smart00044 194
smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca
4e-18
COG2114 227
COG2114, CyaA, Adenylate cyclase, family 3 (some p
4e-09
cd07556 133
cd07556, Nucleotidyl_cyc_III, Class III nucleotidy
4e-06
>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain
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Score = 95.4 bits (238), Expect = 4e-26
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLI--PAEYRVSQRGEILIKGKGSMKT 58
PRY ++GDTVN ASRMEST P KIH+SE T L+ ++ ++RGE+ +KGKG M+T
Sbjct: 120 RPRYDVWGDTVNLASRMESTGVPGKIHVSEETYRLLKTREQFEFTERGEVEVKGKGKMET 179
Query: 59 YWLE 62
Y+L
Sbjct: 180 YFLN 183
>gnl|CDD|143636 cd07302, CHD, cyclase homology domain
Back Show alignment and domain information
Score = 88.4 bits (220), Expect = 1e-23
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIP-AEYRVSQRGEILIKGK-GSMKT 58
P Y + GDTVN A+R+ES ++P +I +SE T +L+ A + + GE+ +KGK G ++
Sbjct: 115 RPEYTVIGDTVNLAARLESLAKPGQILVSEATYELLGDAGFEFEELGEVELKGKSGPVRV 174
Query: 59 YWL 61
Y L
Sbjct: 175 YRL 177
Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide. Length = 177
>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain
Back Show alignment and domain information
Score = 75.0 bits (185), Expect = 4e-18
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEY 40
MPRYCLFGDTVN ASRMES +P +I +SE T L+
Sbjct: 150 MPRYCLFGDTVNLASRMESAGDPGQIQVSEETYSLLARRG 189
Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194
>gnl|CDD|225025 COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]
Back Show alignment and domain information
Score = 51.8 bits (124), Expect = 4e-09
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 3 RYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAE-YRVSQRGEILIKGK-GSMKTYW 60
Y + G VN A+R+ES ++P ++ +SE T DL+ S G +KG ++ Y
Sbjct: 153 GYTVVGSAVNQAARLESLAKPGQVLLSEATYDLVRDLVDLFSGLGSHRLKGLARPVRVYQ 212
Query: 61 LEQHDRRAPLSR 72
L R L
Sbjct: 213 LCHRSLRRNLEL 224
>gnl|CDD|143637 cd07556, Nucleotidyl_cyc_III, Class III nucleotidyl cyclases
Back Show alignment and domain information
Score = 42.3 bits (100), Expect = 4e-06
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIH 27
P+Y ++G VN ASRMES ++ ++
Sbjct: 107 RPQYDVWGALVNLASRMESQAKAGQVL 133
Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways. Length = 133
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
>KOG3619|consensus
Back Hide alignment and domain information
Probab=99.65 E-value=1.1e-16 Score=132.80 Aligned_cols=62 Identities=45% Similarity=0.805 Sum_probs=60.3
Q ss_pred CCcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC-cceEEEcceEEecCcCceEEEEEe
Q psy13613 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA-EYRVSQRGEILIKGKGSMKTYWLE 62 (112)
Q Consensus 1 ~~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~-~~~~~~~~~~~lkG~~~~~~~~l~ 62 (112)
+||||+||+|||+||||+|.+.+|+|+||++|+..|.. +|.|..+|.+.+|||+++.||++.
T Consensus 779 KPqYDIWGNTVNvASRMdSTGv~g~IQVTEEt~~iL~~~gy~~~~RG~i~VKGkGel~Tyfl~ 841 (867)
T KOG3619|consen 779 KPQYDIWGNTVNVASRMDSTGVPGRIQVTEETANILQGLGYRFECRGVINVKGKGELETYFLC 841 (867)
T ss_pred CCCccccccchhhhhcccccCCCCeEEecHHHHHHHhcCCeeEEecceEEEecccceeEEEec
Confidence 79999999999999999999999999999999999977 899999999999999999999998
>KOG4171|consensus
Back Show alignment and domain information
Probab=99.60 E-value=1.1e-15 Score=123.60 Aligned_cols=67 Identities=52% Similarity=0.839 Sum_probs=62.6
Q ss_pred CCcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC--cceEEEcceEEecCcCceEEEEEeeeCCC
Q psy13613 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA--EYRVSQRGEILIKGKGSMKTYWLEQHDRR 67 (112)
Q Consensus 1 ~~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~--~~~~~~~~~~~lkG~~~~~~~~l~~~~~~ 67 (112)
||+|++|||+||+||||||.+.|+.|+||+.|++.+.. .|.|.++|.+.+||++...+|+|......
T Consensus 555 mPRYCLFGdTVn~AsrmES~s~p~KI~vS~~T~~~l~~~~~f~f~pRg~v~vk~kg~m~tyFL~~~~~~ 623 (671)
T KOG4171|consen 555 MPRYCLFGDTVNLASRMESSSVPGKINVSPTTYRKLKKQGSFEFEPRGRVEVKGKGPMETYFLERSLGP 623 (671)
T ss_pred ccceeecCCchhhhhhhhcCCCCceEEeCHHHHHHHHhCCCceeeecCccccCCCCceEEEEEEecCCC
Confidence 89999999999999999999999999999999999865 59999999999999999999999876554
>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4
Back Show alignment and domain information
Probab=99.52 E-value=2.3e-14 Score=99.49 Aligned_cols=63 Identities=40% Similarity=0.692 Sum_probs=58.9
Q ss_pred CCcccccCchHHHHHHHhccCCCCeEEECHHHHhhcc--CcceEEEcceEEecCcCceEEEEEee
Q psy13613 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIP--AEYRVSQRGEILIKGKGSMKTYWLEQ 63 (112)
Q Consensus 1 ~~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~--~~~~~~~~~~~~lkG~~~~~~~~l~~ 63 (112)
+++|++||++||+|+||++.+++++|+||+++++.+. ..|.++++|.+.+||++.+.+|+|.+
T Consensus 120 ~~~~~v~G~~vn~Aarl~~~a~~~~i~vs~~v~~~l~~~~~~~~~~~g~~~lkG~~~~~~y~~~~ 184 (184)
T PF00211_consen 120 RPEYDVFGDAVNIAARLESLAPPGQILVSEEVYDALNESDQFRFEELGRVELKGKGPVQTYQLNG 184 (184)
T ss_dssp SEEEEEESHHHHHHHHHHHTSSTTSEEEEHHHHHHHTTHTTEEEEEEEEEEETTSSEEEEEEEE-
T ss_pred ccceeeeehhhhhhHHHHHhhcccccccCHHHHHHhcccCceEEEEeeeEEEecCCCcEEEEEEC
Confidence 4789999999999999999999999999999999999 79999999999999988889998863
6.1.2 from EC) catalyse the formation of cyclic GMP (cGMP) from GTP. cGMP acts as an intracellular messenger, activating cGMP-dependent kinases and regulating cGMP-sensitive ion channels. The role of cGMP as a second messenger in vascular smooth muscle relaxation and retinal photo-transduction is well established. Guanylate cyclase is found both in the soluble and particulate fractions of eukaryotic cells. The soluble and plasma membrane-bound forms differ in structure, regulation and other properties [, , , ]. Most currently known plasma membrane-bound forms are receptors for small polypeptides. The soluble forms of guanylate cyclase are cytoplasmic heterodimers having alpha and beta subunits. In all characterised eukaryote guanylyl- and adenylyl cyclases, cyclic nucleotide synthesis is carried out by the conserved class III cyclase domain. ; GO: 0016849 phosphorus-oxygen lyase activity, 0009190 cyclic nucleotide biosynthetic process, 0035556 intracellular signal transduction; PDB: 3UVJ_A 1FX4_A 1WC4_B 2BW7_D 1WC1_A 1WC0_A 1WC3_A 1WC5_A 1WC6_A 3ET6_B ....
>KOG3618|consensus
Back Show alignment and domain information
Probab=99.42 E-value=2.2e-13 Score=111.88 Aligned_cols=65 Identities=38% Similarity=0.625 Sum_probs=60.7
Q ss_pred cccccCchHHHHHHHhccCCCCeEEECHHHHhhccCcceEEEcceEEecCcCceEEEEEeeeCCC
Q psy13613 3 RYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVSQRGEILIKGKGSMKTYWLEQHDRR 67 (112)
Q Consensus 3 ~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~~~~~~~~~~~~lkG~~~~~~~~l~~~~~~ 67 (112)
.||+|||+||+||||-+.+-+.+|+||+.+++.|.+.|.|+++|.+.+||++.+.+|....+...
T Consensus 1210 yYDIWGDtVNiASRMdsTGv~nRIQVs~~~~~~L~~rYeFe~Rg~v~VKGkd~M~tyLy~~r~d~ 1274 (1318)
T KOG3618|consen 1210 YYDIWGDTVNIASRMDSTGVENRIQVSEESYRVLSKRYEFEYRGTVNVKGKDQMKTYLYPKRTDH 1274 (1318)
T ss_pred eehhhcchhhhhhhccccCCcceeEecHHHHHHHHhhccccccceEEEeccCcceeEEeccccCC
Confidence 69999999999999999999999999999999999999999999999999999999988765444
>KOG1023|consensus
Back Show alignment and domain information
Probab=99.27 E-value=6e-12 Score=99.97 Aligned_cols=66 Identities=55% Similarity=0.997 Sum_probs=60.6
Q ss_pred CCcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC--cceEEEcceEEecCcCceEEEEEeeeCCC
Q psy13613 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA--EYRVSQRGEILIKGKGSMKTYWLEQHDRR 67 (112)
Q Consensus 1 ~~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~--~~~~~~~~~~~lkG~~~~~~~~l~~~~~~ 67 (112)
||+|++|||+||+|+|||+.++ +.|++|+++...+.. .|.++.+|.+.+||++...+||+.+....
T Consensus 411 mPRYclFgDtvn~AsrMes~G~-~~i~~s~~~~~~l~~~~~~~~e~rG~v~~kgkg~~~t~wl~g~~~~ 478 (484)
T KOG1023|consen 411 MPRYCLFGDTVNTASRMESNGK-LMIHLSEEAKNLLTERPQFETEERGLVELKGKGVMSTYWLLGESSK 478 (484)
T ss_pred CCcccchhhHHHHHhhhhhcCC-eEEEecHHHHHHHHhcCceeeeccCcEEeecCceeeeEEeccCccc
Confidence 8999999999999999999999 999999999988742 78899999999999999999999886554
>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]
Back Show alignment and domain information
Probab=99.26 E-value=7.1e-12 Score=90.80 Aligned_cols=62 Identities=32% Similarity=0.438 Sum_probs=56.4
Q ss_pred ccccCchHHHHHHHhccCCCCeEEECHHHHhhcc-CcceEEEcceEEecCcCce-EEEEEeeeC
Q psy13613 4 YCLFGDTVNTASRMESTSEPMKIHISENTKDLIP-AEYRVSQRGEILIKGKGSM-KTYWLEQHD 65 (112)
Q Consensus 4 y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~-~~~~~~~~~~~~lkG~~~~-~~~~l~~~~ 65 (112)
||+||++||+|+|||+++++++|++|+.|++.+. ..+.+...|...+||+..+ ..|.+....
T Consensus 154 ~~~~G~~VN~AaRLe~~a~~g~i~iS~~~~~~~~~~~~~~~~~g~~~lkg~~~~~~v~~~~~~~ 217 (227)
T COG2114 154 YTVVGSAVNQAARLESLAKPGQVLLSEATYDLVRDLVDLFSGLGSHRLKGLARPVRVYQLCHRS 217 (227)
T ss_pred eeEechHhHHHHHHHHhcCCCeEEEcHHHHHHHhhhhhhhhcCCceecCCCCCceEEEEecccc
Confidence 7999999999999999999999999999999999 6888889999999999887 778776543
>cd07302 CHD cyclase homology domain
Back Show alignment and domain information
Probab=99.14 E-value=1.3e-10 Score=78.74 Aligned_cols=59 Identities=39% Similarity=0.667 Sum_probs=54.2
Q ss_pred CcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC-cceEEEcceEEecCcCce-EEEE
Q psy13613 2 PRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA-EYRVSQRGEILIKGKGSM-KTYW 60 (112)
Q Consensus 2 ~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~-~~~~~~~~~~~lkG~~~~-~~~~ 60 (112)
++|++||++||+|+||++.+++++|++|+++++.+.. .|.+.+.+.+.+||...+ .+|.
T Consensus 116 ~~~~~~G~~v~~A~rl~~~a~~~~i~vs~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~y~ 176 (177)
T cd07302 116 PEYTVIGDTVNLAARLESLAKPGQILVSEATYELLGDAGFEFEELGEVELKGKSGPVRVYR 176 (177)
T ss_pred cceeEecchHhHHHHHHhcCCCCEEEECHHHHHhhccCceEEEEeCCEEecCCCCceEEEE
Confidence 6799999999999999999999999999999999998 899999999999998655 5564
Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.
>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain
Back Show alignment and domain information
Probab=98.51 E-value=7.6e-08 Score=67.37 Aligned_cols=37 Identities=62% Similarity=0.977 Sum_probs=35.0
Q ss_pred CcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC
Q psy13613 2 PRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA 38 (112)
Q Consensus 2 ~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~ 38 (112)
++||+||++||+|+||++.+++++|++|+++++.+..
T Consensus 151 ~~~~~~G~~vn~AarL~~~a~~g~i~vs~~~~~~l~~ 187 (194)
T smart00044 151 PRYCLFGDTVNLASRMESVGDPGQILVSEETYSLLRR 187 (194)
T ss_pred ceeEEeChHHHHHHHHHhcCCCCeEEECHHHHHHHHh
Confidence 6899999999999999999999999999999999853
Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.
>KOG3618|consensus
Back Show alignment and domain information
Probab=98.27 E-value=1.1e-06 Score=73.29 Aligned_cols=66 Identities=27% Similarity=0.471 Sum_probs=52.6
Q ss_pred CcccccCchHHHHHHHhccCCCCeEEECHHHHhhccCcceEEEc------ceEEecCcC------ceEEEEEeeeCCC
Q psy13613 2 PRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVSQR------GEILIKGKG------SMKTYWLEQHDRR 67 (112)
Q Consensus 2 ~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~~~~~~~~------~~~~lkG~~------~~~~~~l~~~~~~ 67 (112)
..||||+++||+|+.||+.+.+|+++||++|...|++.|..++- +...+.|.. ...+|++.+..+.
T Consensus 453 fKFDVwSNDV~LAN~MEssGvag~VHiSeaTak~L~d~Ye~EeG~~~~g~~~~~V~g~~rRtnP~t~kt~li~G~~ga 530 (1318)
T KOG3618|consen 453 FKFDVWSNDVNLANLMESSGVAGKVHISEATAKYLDDRYEMEEGKVIEGLGQSVVAGQLRRTNPGTLKTYLISGQRGA 530 (1318)
T ss_pred EeeeeccCcchHHHHHHhcCCCcceEeeHHHHHHhcccceeccCccccccceeEEeceeeecCCcccceEEecCcccc
Confidence 36999999999999999999999999999999999998888753 344455532 2477877765533
>KOG3619|consensus
Back Show alignment and domain information
Probab=98.16 E-value=1.4e-06 Score=73.39 Aligned_cols=62 Identities=26% Similarity=0.366 Sum_probs=50.0
Q ss_pred cccccCchHHHHHHHhccCCCCeEEECHHHHhhccCcceEEEcceE--E-ecCcCceEEEEEeee
Q psy13613 3 RYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVSQRGEI--L-IKGKGSMKTYWLEQH 64 (112)
Q Consensus 3 ~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~~~~~~~~~~~--~-lkG~~~~~~~~l~~~ 64 (112)
||||||++|.+|++||+.+.||+++||++|.+-|.++|.+++-... . .--+..+.+|.+...
T Consensus 226 q~DVws~dv~lAn~mEs~G~pgrVhis~~Tl~~L~g~yeve~g~g~~r~~~l~~~~~~ty~i~~~ 290 (867)
T KOG3619|consen 226 QYDVWSNDVTLANHMEAGGVPGRVHISKATLDCLNGEYEVEPGHGGERDPYLKEHGIETYLIIPP 290 (867)
T ss_pred eeeeccchhhhhhhhhhcCCCceeEechhHHHHhCCCceeecCCCcccchHHHhcCCceEEeccc
Confidence 8999999999999999999999999999999999999988875221 1 111234578888653
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value
Query
112
d1azsb_ 199
d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {
2e-21
d1azsa_ 190
d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D
5e-15
d1fx2a_ 235
d.58.29.1 (A:) Receptor-type monomeric adenylyl cy
2e-12
d1wc1a_ 197
d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p
1e-11
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199
Back Hide information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 82.3 bits (202), Expect = 2e-21
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIP-AEYRVSQRGEILIKGKGSMKTY 59
P+Y ++G+TVN ASRM+ST KI ++E T ++ Y + RG I +KGKG +KTY
Sbjct: 136 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTY 195
Query: 60 WL 61
++
Sbjct: 196 FV 197
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]
Score = 65.3 bits (158), Expect = 5e-15
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVS--QRGEILIKGK-GSMK 57
++ ++ + V A+ ME+ + +IHI++ T + +Y V GE K S++
Sbjct: 126 KWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEPGCGGERNAYLKEHSIE 185
Query: 58 TYWL 61
T+ +
Sbjct: 186 TFLI 189
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]
Score = 58.8 bits (141), Expect = 2e-12
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLI----PAEYRVSQRGEILIKGKG-S 55
Y +G T N A+R ES + ++ ++ + + V+ G++ ++G
Sbjct: 151 TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDP 210
Query: 56 MKTYWLEQ-HDRRAPLSRL 73
+K Y L R RL
Sbjct: 211 VKMYQLNTVPSRNFAALRL 229
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]
Score = 56.5 bits (135), Expect = 1e-11
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVSQRGEILIKGKG-SMKTY 59
+ G +VN A+R++ + P I +S +P + + +R + +KG + T
Sbjct: 132 RSDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVP-DEEIIKREFLELKGIDEPVMTC 190
Query: 60 WL 61
+
Sbjct: 191 VI 192
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability
Query 112
d1azsb_ 199
Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor
99.67
d1wc1a_ 197
Adenylate cyclase CyaC {Spirulina platensis [TaxId
99.5
d1azsa_ 190
Adenylyl cyclase VC1, domain C1a {Dog (Canis famil
99.46
d1fx2a_ 235
Receptor-type monomeric adenylyl cyclase {Trypanos
99.43
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}
Back Hide information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.67 E-value=1.7e-17 Score=115.17 Aligned_cols=62 Identities=44% Similarity=0.725 Sum_probs=58.7
Q ss_pred CCcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC-cceEEEcceEEecCcCceEEEEEe
Q psy13613 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA-EYRVSQRGEILIKGKGSMKTYWLE 62 (112)
Q Consensus 1 ~~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~-~~~~~~~~~~~lkG~~~~~~~~l~ 62 (112)
+|+||+|||+||+|+|||+.+++++|+||++|++.+.+ .|.++++|.+.+||++.+.+|+|.
T Consensus 136 ~~~y~v~Gd~VN~AaRle~~a~~g~I~vS~~t~~~l~~~~~~~~~~g~i~vKGkg~~~ty~l~ 198 (199)
T d1azsb_ 136 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVN 198 (199)
T ss_dssp SCEEEEESHHHHHHHHHHHTCCTTEEEEEHHHHHHHHHTTCCEEEEEEEEETTTEEEEEEEEC
T ss_pred cccccccchHHHHHHHHHhcCCCCeEEECHHHHHHHhcCCeEEEEeCCEEecCCCeEEEEEEe
Confidence 58999999999999999999999999999999999977 699999999999999999999985
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]}
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class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]
Probab=99.50 E-value=7e-15 Score=100.47 Aligned_cols=60 Identities=22% Similarity=0.370 Sum_probs=54.4
Q ss_pred CcccccCchHHHHHHHhccCCCCeEEECHHHHhhccCcceEEEcceEEecCcCce-EEEEEe
Q psy13613 2 PRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVSQRGEILIKGKGSM-KTYWLE 62 (112)
Q Consensus 2 ~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~~~~~~~~~~~~lkG~~~~-~~~~l~ 62 (112)
++||+||++||+|+||++.|++++|+||+++++.+.+ +.+.+.|.+.+||+.+| .+|.+.
T Consensus 133 ~~y~~~G~~Vn~AaRle~~a~~~~Ilise~~~~~l~~-~~~~~~~~~~lKG~~~pv~~y~i~ 193 (197)
T d1wc1a_ 133 SDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVPD-EEIIKREFLELKGIDEPVMTCVIN 193 (197)
T ss_dssp EEEEEESHHHHHHHHHHHHSCTTCEEEEHHHHTTSCG-GGEEEEEEECCTTCSSCEEEEEEC
T ss_pred ccccccccHHHHHHHHHhcCCCCEEEEeHHHHHhcCC-CeeEEecCEEeCCCCcEEEEEEEC
Confidence 6899999999999999999999999999999999975 66888899999999997 667664
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]}
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class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.46 E-value=3.8e-15 Score=102.22 Aligned_cols=61 Identities=23% Similarity=0.344 Sum_probs=55.1
Q ss_pred CCcccccCchHHHHHHHhccCCCCeEEECHHHHhhccCcceEEE--cceEEecCcCce-EEEEE
Q psy13613 1 MPRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPAEYRVSQ--RGEILIKGKGSM-KTYWL 61 (112)
Q Consensus 1 ~~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~~~~~~~--~~~~~lkG~~~~-~~~~l 61 (112)
+|+||+||++||+|+||++.+++++|++|++|++.+++.|.+++ .|...++|+.++ .+|.+
T Consensus 126 ~~~~~~~G~~Vn~Aarl~~~a~~~~ilvS~~~~~~l~~~~~~~~~~~g~~~~~gk~~~i~~y~v 189 (190)
T d1azsa_ 126 KWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEPGCGGERNAYLKEHSIETFLI 189 (190)
T ss_dssp SCCCEEESHHHHHHHHHHHTCCTTSEEECSTTTTTTTTCSCEEECCGGGTCHHHHHTTCCCEEE
T ss_pred ccccceeccceehHHHHhccCCCCEEEECHHHHHHhccCceEEEccCcEEEEecccCceEEEEE
Confidence 58999999999999999999999999999999999999887776 688899998776 77876
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]
Probab=99.43 E-value=1e-13 Score=97.48 Aligned_cols=62 Identities=24% Similarity=0.379 Sum_probs=56.5
Q ss_pred CcccccCchHHHHHHHhccCCCCeEEECHHHHhhccC----cceEEEcceEEecCcCce-EEEEEee
Q psy13613 2 PRYCLFGDTVNTASRMESTSEPMKIHISENTKDLIPA----EYRVSQRGEILIKGKGSM-KTYWLEQ 63 (112)
Q Consensus 2 ~~y~v~Gd~VNiAsRLes~a~~~~I~vS~~t~~~l~~----~~~~~~~~~~~lkG~~~~-~~~~l~~ 63 (112)
.+||+||++||+|+||++.+++++|+||++|++.+.. .|.++.+|.+.+||+.++ .+|.+..
T Consensus 152 ~~~~~~G~~Vn~AaRles~a~~g~IliS~~~~~~l~~~~~~~~~~~~lg~~~lKG~~~p~~vy~v~~ 218 (235)
T d1fx2a_ 152 KGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDPVKMYQLNT 218 (235)
T ss_dssp SSEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTSCHHHHHTCCEEEEEEECCTTCSSCEEEEEECC
T ss_pred eeeeeecHHHHHHHHHHhccCCCeEEECHHHHHHHhhhhcCceEEEEeceEEecCCCCCEEEEEEec
Confidence 5799999999999999999999999999999999863 699999999999999987 7788754