Psyllid ID: psy13700

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES
ccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccccEEEEEEEEEEEEEEEEcccccccccccccccccccccccccccccccccEEEEcccccHHHHcccccHHHHHHHHHccccEEHHHHHHHHHHccccccccccc
ccHHHHHHHHHccccEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccEcEEEEEEEccEEEEEEEEEEcccccccccccEEccccccccHHHcccccEEccHccHHHHHHcccHHHHHHHHHHccHHHHHHHcHHHHHcccEEEcccccc
mdesskktlssipllktkagprdkdlwpkRLKEEYVALIEYVKnnkaadndwfrlesnkegtkwfGSCWFFYNQLKYefqiefdipitfpttapelalpeldgktakmyrggkiclsdhfkplwarnvpkFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES
mdesskktlssipllktkagprdkdlwpkRLKEEYVALIEyvknnkaadndwFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES
MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES
*************************LWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKY******
*****KK*LSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGII*Y******
**********SIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES
*D*SSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQ*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query166 2.2.26 [Sep-21-2011]
Q178A5169 Ubiquitin-fold modifier-c N/A N/A 1.0 0.982 0.777 1e-77
B0WVC4169 Ubiquitin-fold modifier-c N/A N/A 1.0 0.982 0.771 6e-77
Q7PND3167 Ubiquitin-fold modifier-c yes N/A 1.0 0.994 0.783 9e-77
B3RTL9168 Ubiquitin-fold modifier-c N/A N/A 1.0 0.988 0.783 2e-76
A7SM54169 Ubiquitin-fold modifier-c N/A N/A 1.0 0.982 0.771 3e-76
B4QHD6164 Ubiquitin-fold modifier-c N/A N/A 0.981 0.993 0.773 2e-75
B4HSI1164 Ubiquitin-fold modifier-c N/A N/A 0.981 0.993 0.773 2e-75
B4MIX7164 Ubiquitin-fold modifier-c N/A N/A 0.981 0.993 0.766 2e-75
B4P6S9164 Ubiquitin-fold modifier-c N/A N/A 0.981 0.993 0.773 4e-75
Q7K1Z5164 Ubiquitin-fold modifier-c yes N/A 0.981 0.993 0.773 4e-75
>sp|Q178A5|UFC1_AEDAE Ubiquitin-fold modifier-conjugating enzyme 1 OS=Aedes aegypti GN=AAEL005968 PE=3 SV=1 Back     alignment and function desciption
 Score =  288 bits (737), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 129/166 (77%), Positives = 154/166 (92%)

Query: 1   MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKE 60
           +DES++KTLSSIPLL+TKAGPRDK+LW +RLKEEY ALI+YV+NNK++D+DWFRLESNKE
Sbjct: 2   VDESTRKTLSSIPLLQTKAGPRDKELWVQRLKEEYQALIKYVQNNKSSDSDWFRLESNKE 61

Query: 61  GTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHF 120
           GTKWFG CW+ +N LKYEF +EFDIP+T+P TAPE+ALPELDGKTAKMYRGGKICL+DHF
Sbjct: 62  GTKWFGKCWYVHNLLKYEFDVEFDIPVTYPATAPEIALPELDGKTAKMYRGGKICLTDHF 121

Query: 121 KPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES 166
           KPLW+RNVPKFGIAHAMALGL PWLAVEIP L++ G++ Y+EK E+
Sbjct: 122 KPLWSRNVPKFGIAHAMALGLAPWLAVEIPDLIEKGVVAYKEKGET 167
E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
Aedes aegypti (taxid: 7159)
>sp|B0WVC4|UFC1_CULQU Ubiquitin-fold modifier-conjugating enzyme 1 OS=Culex quinquefasciatus GN=CPIJ011320 PE=3 SV=1 Back     alignment and function description
>sp|Q7PND3|UFC1_ANOGA Ubiquitin-fold modifier-conjugating enzyme 1 OS=Anopheles gambiae GN=AGAP008099 PE=3 SV=3 Back     alignment and function description
>sp|B3RTL9|UFC1_TRIAD Ubiquitin-fold modifier-conjugating enzyme 1 OS=Trichoplax adhaerens GN=TRIADDRAFT_35934 PE=3 SV=1 Back     alignment and function description
>sp|A7SM54|UFC1_NEMVE Ubiquitin-fold modifier-conjugating enzyme 1 OS=Nematostella vectensis GN=v1g214407 PE=3 SV=1 Back     alignment and function description
>sp|B4QHD6|UFC1_DROSI Ubiquitin-fold modifier-conjugating enzyme 1 OS=Drosophila simulans GN=GD25576 PE=3 SV=1 Back     alignment and function description
>sp|B4HSI1|UFC1_DROSE Ubiquitin-fold modifier-conjugating enzyme 1 OS=Drosophila sechellia GN=GM20100 PE=3 SV=1 Back     alignment and function description
>sp|B4MIX7|UFC1_DROWI Ubiquitin-fold modifier-conjugating enzyme 1 OS=Drosophila willistoni GN=GK10642 PE=3 SV=1 Back     alignment and function description
>sp|B4P6S9|UFC1_DROYA Ubiquitin-fold modifier-conjugating enzyme 1 OS=Drosophila yakuba GN=GE14107 PE=3 SV=1 Back     alignment and function description
>sp|Q7K1Z5|UFC1_DROME Ubiquitin-fold modifier-conjugating enzyme 1 OS=Drosophila melanogaster GN=CG8386 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query166
187177321166 ubiquitin-fold modifier conjugating enzy 0.981 0.981 0.846 1e-78
357614291169 Ufm1-conjugating enzyme 1 [Danaus plexip 0.993 0.976 0.812 7e-78
389610177169 ubiquitin-fold modifier-conjugating enzy 0.993 0.976 0.812 5e-77
383859790170 PREDICTED: ubiquitin-fold modifier-conju 0.993 0.970 0.8 9e-77
332020286168 Ufm1-conjugating enzyme 1 [Acromyrmex ec 0.981 0.970 0.822 2e-76
307182304168 Ufm1-conjugating enzyme 1 [Camponotus fl 0.975 0.964 0.820 3e-76
157111837169 hypothetical protein AaeL_AAEL005968 [Ae 1.0 0.982 0.777 5e-76
307196390168 Ufm1-conjugating enzyme 1 [Harpegnathos 0.981 0.970 0.809 6e-76
91084695166 PREDICTED: similar to Ufm1-conjugating e 0.987 0.987 0.798 7e-76
328780745171 PREDICTED: ubiquitin-fold modifier-conju 0.993 0.964 0.787 1e-75
>gi|187177321|ref|NP_001119638.1| ubiquitin-fold modifier conjugating enzyme 1 [Acyrthosiphon pisum] gi|89574503|gb|ABD76382.1| putative ufm1-conjugation enzyme 1 [Acyrthosiphon pisum] gi|239790572|dbj|BAH71839.1| ACYPI000054 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  297 bits (760), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 138/163 (84%), Positives = 152/163 (93%)

Query: 3   ESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGT 62
           E++KK LSSIPLLKTKAGPRD DLWP+RLKEEY +LI+YV+NNKAADNDWFRLESNKEGT
Sbjct: 2   ENTKKALSSIPLLKTKAGPRDVDLWPQRLKEEYQSLIQYVQNNKAADNDWFRLESNKEGT 61

Query: 63  KWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKP 122
           KWFG CW F NQLKYEF IEFDIP+TFPTTAPE+ALPELDGKTAKMYRGGKICLSDHFKP
Sbjct: 62  KWFGKCWVFQNQLKYEFDIEFDIPVTFPTTAPEIALPELDGKTAKMYRGGKICLSDHFKP 121

Query: 123 LWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTE 165
           LWARNVPKFGI+HA+ALGLGPWLAVEIP L+  G++KY+EK E
Sbjct: 122 LWARNVPKFGISHALALGLGPWLAVEIPELILRGVVKYKEKEE 164

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|357614291|gb|EHJ69006.1| Ufm1-conjugating enzyme 1 [Danaus plexippus] Back     alignment and taxonomy information
>gi|389610177|dbj|BAM18700.1| ubiquitin-fold modifier-conjugating enzyme 1 [Papilio xuthus] Back     alignment and taxonomy information
>gi|383859790|ref|XP_003705375.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332020286|gb|EGI60717.1| Ufm1-conjugating enzyme 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307182304|gb|EFN69605.1| Ufm1-conjugating enzyme 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|157111837|ref|XP_001651749.1| hypothetical protein AaeL_AAEL005968 [Aedes aegypti] gi|121956306|sp|Q178A5.1|UFC1_AEDAE RecName: Full=Ubiquitin-fold modifier-conjugating enzyme 1; AltName: Full=Ufm1-conjugating enzyme 1 gi|108878289|gb|EAT42514.1| AAEL005968-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|307196390|gb|EFN77979.1| Ufm1-conjugating enzyme 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91084695|ref|XP_969196.1| PREDICTED: similar to Ufm1-conjugating enzyme 1 (Ubiquitin-fold modifier-conjugating enzyme 1) [Tribolium castaneum] gi|270008931|gb|EFA05379.1| hypothetical protein TcasGA2_TC015547 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328780745|ref|XP_623505.2| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1-like [Apis mellifera] gi|380028413|ref|XP_003697897.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query166
FB|FBgn0034061164 CG8386 [Drosophila melanogaste 0.981 0.993 0.773 1.1e-71
UNIPROTKB|Q5E953167 UFC1 "Ubiquitin-fold modifier- 0.975 0.970 0.753 3.3e-70
UNIPROTKB|Q9Y3C8167 UFC1 "Ubiquitin-fold modifier- 0.975 0.970 0.753 3.3e-70
UNIPROTKB|F2Z530167 UFC1 "Uncharacterized protein" 0.975 0.970 0.753 3.3e-70
UNIPROTKB|C1BZU2167 ufc1 "Ubiquitin-fold modifier- 0.993 0.988 0.739 4.3e-70
UNIPROTKB|C1BKD1167 ufc1 "Ubiquitin-fold modifier- 0.975 0.970 0.734 5.5e-70
UNIPROTKB|B9EM04167 ufc1 "Ubiquitin-fold modifier- 0.993 0.988 0.727 8.9e-70
ZFIN|ZDB-GENE-040801-268166 ufc1 "ubiquitin-fold modifier 0.975 0.975 0.740 8.9e-70
UNIPROTKB|E2RM60167 UFC1 "Uncharacterized protein" 0.975 0.970 0.740 1.4e-69
RGD|1303313167 Ufc1 "ubiquitin-fold modifier 0.975 0.970 0.740 1.4e-69
FB|FBgn0034061 CG8386 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
 Identities = 126/163 (77%), Positives = 150/163 (92%)

Query:     1 MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKE 60
             +D+S++KTLS+IPLL+ +AGPR+KD+W +RLKEEY ALI+YV+NNK + +DWFRLESNKE
Sbjct:     2 VDDSTRKTLSNIPLLQIRAGPREKDVWVQRLKEEYQALIKYVENNKQSGSDWFRLESNKE 61

Query:    61 GTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHF 120
             GTKWFG CW+ +N LKYEF +EFDIP+T+PTTAPE+ALPELDGKTAKMYRGGKICL+DHF
Sbjct:    62 GTKWFGKCWYMHNLLKYEFDVEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHF 121

Query:   121 KPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEK 163
             KPLWARNVPKFGIAHAMALGL PWLAVEIP L++ GII Y+EK
Sbjct:   122 KPLWARNVPKFGIAHAMALGLAPWLAVEIPDLIEKGIITYKEK 164
GO:0046331 "lateral inhibition" evidence=IMP
UNIPROTKB|Q5E953 UFC1 "Ubiquitin-fold modifier-conjugating enzyme 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y3C8 UFC1 "Ubiquitin-fold modifier-conjugating enzyme 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z530 UFC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|C1BZU2 ufc1 "Ubiquitin-fold modifier-conjugating enzyme 1" [Esox lucius (taxid:8010)] Back     alignment and assigned GO terms
UNIPROTKB|C1BKD1 ufc1 "Ubiquitin-fold modifier-conjugating enzyme 1" [Osmerus mordax (taxid:8014)] Back     alignment and assigned GO terms
UNIPROTKB|B9EM04 ufc1 "Ubiquitin-fold modifier-conjugating enzyme 1" [Salmo salar (taxid:8030)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-268 ufc1 "ubiquitin-fold modifier conjugating enzyme 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RM60 UFC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1303313 Ufc1 "ubiquitin-fold modifier conjugating enzyme 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B3RTL9UFC1_TRIADNo assigned EC number0.78311.00.9880N/AN/A
B4HSI1UFC1_DROSENo assigned EC number0.77300.98190.9939N/AN/A
Q9CR09UFC1_MOUSENo assigned EC number0.73000.98190.9760yesN/A
C3ZDX5UFC1_BRAFLNo assigned EC number0.79110.95180.9349yesN/A
B4H538UFC1_DROPENo assigned EC number0.77300.98190.9939N/AN/A
Q03598UFC1_CAEELNo assigned EC number0.72950.95780.9814yesN/A
B4QHD6UFC1_DROSINo assigned EC number0.77300.98190.9939N/AN/A
Q1ZXC9UFC1_DICDINo assigned EC number0.69130.97590.9878yesN/A
Q6BBI8UFC1_RATNo assigned EC number0.72720.99390.9880yesN/A
Q7K1Z5UFC1_DROMENo assigned EC number0.77300.98190.9939yesN/A
C1BZU2UFC1_ESOLUNo assigned EC number0.73930.99390.9880N/AN/A
B9EM04UFC1_SALSANo assigned EC number0.72720.99390.9880N/AN/A
A2Z5S8UFC1_ORYSINo assigned EC number0.59870.96980.8702N/AN/A
Q5E953UFC1_BOVINNo assigned EC number0.74840.98190.9760yesN/A
B3MC02UFC1_DROANNo assigned EC number0.75460.98190.9939N/AN/A
B4J9W6UFC1_DROGRNo assigned EC number0.74540.97590.9642N/AN/A
B4MIX7UFC1_DROWINo assigned EC number0.76680.98190.9939N/AN/A
B4P6S9UFC1_DROYANo assigned EC number0.77300.98190.9939N/AN/A
Q9SXC8UFC1_ARATHNo assigned EC number0.66660.96980.9252yesN/A
Q8S625UFC1_ORYSJNo assigned EC number0.59870.96980.8702yesN/A
A8XAF4UFC1_CAEBRNo assigned EC number0.72950.95780.9814N/AN/A
A7SM54UFC1_NEMVENo assigned EC number0.77101.00.9822N/AN/A
Q6DEN0UFC1_DANRENo assigned EC number0.73610.98190.9819yesN/A
Q28X71UFC1_DROPSNo assigned EC number0.77300.98190.9939yesN/A
B4LL39UFC1_DROVINo assigned EC number0.75920.97590.9818N/AN/A
C1BKD1UFC1_OSMMONo assigned EC number0.72120.99390.9880N/AN/A
Q7PND3UFC1_ANOGANo assigned EC number0.78311.00.9940yesN/A
Q9Y3C8UFC1_HUMANNo assigned EC number0.73930.99390.9880yesN/A
A9UR29UFC1_MONBENo assigned EC number0.71340.98790.9879N/AN/A
B3NPZ0UFC1_DROERNo assigned EC number0.77300.98190.9939N/AN/A
A8Q8J2UFC1_BRUMANo assigned EC number0.74210.95780.9636N/AN/A
Q178A5UFC1_AEDAENo assigned EC number0.77711.00.9822N/AN/A
B0WVC4UFC1_CULQUNo assigned EC number0.77101.00.9822N/AN/A
B4KQQ4UFC1_DROMONo assigned EC number0.75920.97590.9818N/AN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query166
pfam08694161 pfam08694, UFC1, Ubiquitin-fold modifier-conjugati 1e-107
>gnl|CDD|149675 pfam08694, UFC1, Ubiquitin-fold modifier-conjugating enzyme 1 Back     alignment and domain information 
 Score =  301 bits (772), Expect = e-107
 Identities = 119/161 (73%), Positives = 142/161 (88%)

Query: 3   ESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGT 62
           E++K T+S IPLLKT AGPRD + W +RLKEEY ALI+YV+NNK+ADNDWFRLESNKEGT
Sbjct: 1   EATKSTVSRIPLLKTNAGPRDGEKWIQRLKEEYQALIKYVENNKSADNDWFRLESNKEGT 60

Query: 63  KWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKP 122
           +WFG CW+ +N  KYEF +EFDIP+T+P T PE+ALPELDGKTAKMYRGGKICL+ HFKP
Sbjct: 61  RWFGKCWYVHNLKKYEFDLEFDIPVTYPATPPEIALPELDGKTAKMYRGGKICLTIHFKP 120

Query: 123 LWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEK 163
           LWARNVPKFGIAHA+ALGL PWLAVEIP L++ G+IK+++ 
Sbjct: 121 LWARNVPKFGIAHALALGLAPWLAVEIPDLIEKGVIKHKDD 161

Ubiquitin-like (UBL) post-translational modifiers are covalently linked to most, if not all, target protein(s) through an enzymatic cascade analogous to ubiquitylation, consisting of E1 (activating), E2 (conjugating), and E3 (ligating) enzymes. Ubiquitin-fold modifier 1 (Ufm1) a ubiquitin-like protein is activated by a novel E1-like enzyme, Uba5, by forming a high-energy thioester bond. Activated Ufm1 is then transferred to its cognate E2-like enzyme, Ufc1, in a similar thioester linkage. This family represents the E2-like enzyme. Length = 161

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 166
PF08694161 UFC1: Ubiquitin-fold modifier-conjugating enzyme 1 100.0
KOG3357|consensus167 100.0
COG5078153 Ubiquitin-protein ligase [Posttranslational modifi 99.72
KOG0417|consensus148 99.66
PLN00172147 ubiquitin conjugating enzyme; Provisional 99.62
PTZ00390152 ubiquitin-conjugating enzyme; Provisional 99.6
PF00179140 UQ_con: Ubiquitin-conjugating enzyme; InterPro: IP 99.54
cd00195141 UBCc Ubiquitin-conjugating enzyme E2, catalytic (U 99.49
KOG0418|consensus200 99.31
smart00212145 UBCc Ubiquitin-conjugating enzyme E2, catalytic do 99.25
KOG0419|consensus152 98.99
KOG0422|consensus153 98.97
KOG0421|consensus175 98.95
KOG0424|consensus158 98.94
KOG0427|consensus161 98.92
KOG0426|consensus165 98.82
KOG0416|consensus189 98.35
KOG0425|consensus171 98.32
KOG0894|consensus244 98.28
KOG0428|consensus 314 98.04
KOG0420|consensus184 97.82
KOG0895|consensus 1101 97.09
KOG0423|consensus223 96.84
PF14461133 Prok-E2_B: Prokaryotic E2 family B 96.83
KOG0429|consensus 258 96.15
KOG0895|consensus 1101 94.72
COG3449154 DNA gyrase inhibitor [DNA replication, recombinati 94.13
PF05773113 RWD: RWD domain; InterPro: IPR006575 The RWD eukar 93.62
KOG0896|consensus138 92.97
smart00591107 RWD domain in RING finger and WD repeat containing 92.07
PF05743121 UEV: UEV domain; InterPro: IPR008883 The N-termina 87.8
>PF08694 UFC1: Ubiquitin-fold modifier-conjugating enzyme 1; InterPro: IPR014806 Ubiquitin-like (UBL) post-translational modifiers are covalently linked to most, if not all, target protein(s) through an enzymatic cascade analogous to ubiquitylation, consisting of E1 (activating), E2 (conjugating), and E3 (ligating) enzymes Back     alignment and domain information 
Probab=100.00  E-value=1.9e-103  Score=630.32  Aligned_cols=161  Identities=78%  Similarity=1.398  Sum_probs=134.8

Q ss_pred             hhhhhhhccccceeccCCCCCCChHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeeceecccceeEEEE
Q psy13700          3 ESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIE   82 (166)
Q Consensus         3 ~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~~~~~~kyeF~le   82 (166)
                      ++|+++|++||||+|||||||+++|++||||||++||+||++||++|||||+|+||++||||+|+|||+|++.+|||+||
T Consensus         1 ~~tk~t~~~IPll~~~AGPrd~~~W~~RLKEEy~aLI~Yv~~nK~~DndWF~lesn~~GT~W~GkCW~~h~l~kYEF~~e   80 (161)
T PF08694_consen    1 EATKSTVEKIPLLKTKAGPRDGDLWVQRLKEEYQALIKYVENNKENDNDWFRLESNKEGTRWFGKCWYIHNLLKYEFDLE   80 (161)
T ss_dssp             -HHHHHHHCS---SS---TTSCHHHHHHHHHHHHHHHHHHHHHHHTT---EEEEE-TTSSEEEEEEEEEETTEEEEEEEE
T ss_pred             CchHHHHHhCccccccCCCCCHHHHHHHHHHHHHHHHHHHHhcccccCCeEEeccCCCCCccccEEEEEeeeeeEEEeee
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCCCCCCeeecCCCCCcccccccCceeecCCCCchhhcccCCchhHHHHHhhcccchhhhhhhhHHHhccccccc
Q psy13700         83 FDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQE  162 (166)
Q Consensus        83 fdIP~tYP~tpPei~fpeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i~~~~  162 (166)
                      ||||+|||+|||||++|||||||+|||||||||||+||+|||+|||||||||||||||||||||||||+||++|+|+|++
T Consensus        81 FdIP~tYP~t~pEi~lPeLdGKTaKMYRGGkIClt~HFkPLWakN~PkfGIaHalaLGL~PWLA~EiP~Lv~~g~i~~k~  160 (161)
T PF08694_consen   81 FDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWAKNVPKFGIAHALALGLGPWLAVEIPDLVEKGVIKHKE  160 (161)
T ss_dssp             EE--TTTTTS----B-GGGTTT-SSBCCCCBB---TTHHHHHHCTTTT--HHHHHHHTHHHHHHHHHHHHHHTTSSS-SE
T ss_pred             cCCCccCCCCCcceeccccCCchhhhhcCceEeeecccchhhhhcCCchhHHHHHHhccchhhhhhhHHHHHcCCcccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             c
Q psy13700        163 K  163 (166)
Q Consensus       163 ~  163 (166)
                      +
T Consensus       161 ~  161 (161)
T PF08694_consen  161 D  161 (161)
T ss_dssp             C
T ss_pred             C
Confidence            5

Ubiquitin-fold modifier 1 (Ufm1) a ubiquitin-like protein is activated by a novel E1-like enzyme, Uba5, by forming a high-energy thioester bond. Activated Ufm1 is then transferred to its cognate E2-like enzyme, Ufc1, in a similar thioester linkage. This family represents the E2-like enzyme [].; PDB: 2Z6P_A 2K07_A 2Z6O_A 3EVX_D 3KPA_A.
>KOG3357|consensus Back     alignment and domain information
>COG5078 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0417|consensus Back     alignment and domain information
>PLN00172 ubiquitin conjugating enzyme; Provisional Back     alignment and domain information
>PTZ00390 ubiquitin-conjugating enzyme; Provisional Back     alignment and domain information
>PF00179 UQ_con: Ubiquitin-conjugating enzyme; InterPro: IPR000608 The post-translational attachment of ubiquitin (IPR000626 from INTERPRO) to proteins (ubiquitinylation) alters the function, location or trafficking of a protein, or targets it to the 26S proteasome for degradation [, , ] Back     alignment and domain information
>cd00195 UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain Back     alignment and domain information
>KOG0418|consensus Back     alignment and domain information
>smart00212 UBCc Ubiquitin-conjugating enzyme E2, catalytic domain homologues Back     alignment and domain information
>KOG0419|consensus Back     alignment and domain information
>KOG0422|consensus Back     alignment and domain information
>KOG0421|consensus Back     alignment and domain information
>KOG0424|consensus Back     alignment and domain information
>KOG0427|consensus Back     alignment and domain information
>KOG0426|consensus Back     alignment and domain information
>KOG0416|consensus Back     alignment and domain information
>KOG0425|consensus Back     alignment and domain information
>KOG0894|consensus Back     alignment and domain information
>KOG0428|consensus Back     alignment and domain information
>KOG0420|consensus Back     alignment and domain information
>KOG0895|consensus Back     alignment and domain information
>KOG0423|consensus Back     alignment and domain information
>PF14461 Prok-E2_B: Prokaryotic E2 family B Back     alignment and domain information
>KOG0429|consensus Back     alignment and domain information
>KOG0895|consensus Back     alignment and domain information
>COG3449 DNA gyrase inhibitor [DNA replication, recombination, and repair] Back     alignment and domain information
>PF05773 RWD: RWD domain; InterPro: IPR006575 The RWD eukaryotic domain is found in RING finger (IPR001841 from INTERPRO) and WD repeat (IPR001680 from INTERPRO) containing proteins and DEXDc-like helicase (IPR001410 from INTERPRO) subfamily related to the ubiquitin-conjugating enzymes domain (IPR000608 from INTERPRO) Back     alignment and domain information
>KOG0896|consensus Back     alignment and domain information
>smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain Back     alignment and domain information
>PF05743 UEV: UEV domain; InterPro: IPR008883 The N-terminal ubiquitin E2 variant (UEV) domain is ~145 amino acid residues in length and shows significant sequence similarity to E2 ubiquitin ligases but is unable to catalyze ubiquitin transfer as it lacks the active site cysteine that forms the transient thioester bond with the C terminus of ubiquitin (Ub) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query166
2k07_A175 Solution Nmr Structure Of Human E2-Like Ubiquitin-F 5e-75
2z6o_A172 Crystal Structure Of The Ufc1, Ufm1 Conjugating Enz 8e-75
3evx_A175 Crystal Structure Of The Human E2-Like Ubiquitin-Fo 3e-73
2z6p_A172 Crystal Structure Of The Ufc1, Ufm1 Conjugating Enz 3e-73
3kpa_A168 Ubiquitin Fold Modifier Conjugating Enzyme From Lei 2e-60
>pdb|2K07|A Chain A, Solution Nmr Structure Of Human E2-Like Ubiquitin-Fold Modifier Conjugating Enzyme 1 (Ufc1). Northeast Structural Genomics Consortium Target Hr41 Length = 175 Back     alignment and structure 
Iteration: 1

 Score =  276 bits (705), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 122/165 (73%), Positives = 147/165 (89%)
Query: 2   DESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEG 61
           DE++++ +S IP+LKT AGPRD++LW +RLKEEY +LI YV+NNK ADNDWFRLESNKEG
Sbjct: 3   DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEG 62
Query: 62  TKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFK 121
           T+WFG CW+ ++ LKYEF IEFDIPIT+PTTAPE+A+PELDGKTAKMYRGGKICL+DHFK
Sbjct: 63  TRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFK 122
Query: 122 PLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTES 166
           PLWARNVPKFG+AH MALGLGPWLAVEIP L+  G+I+++EK   
Sbjct: 123 PLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCNQ 167
>pdb|2Z6O|A Chain A, Crystal Structure Of The Ufc1, Ufm1 Conjugating Enzyme 1 Length = 172 Back     alignment and structure
>pdb|3EVX|A Chain A, Crystal Structure Of The Human E2-Like Ubiquitin-Fold Modifier Conjugating Enzyme 1 (Ufc1). Northeast Structural Genomics Consortium Target Hr41 Length = 175 Back     alignment and structure
>pdb|2Z6P|A Chain A, Crystal Structure Of The Ufc1, Ufm1 Conjugating Enzyme 1 Length = 172 Back     alignment and structure
>pdb|3KPA|A Chain A, Ubiquitin Fold Modifier Conjugating Enzyme From Leishmania Major (Probable) Length = 168 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query166
2z6o_A172 UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, p 1e-107
3kpa_A168 Probable ubiquitin fold modifier conjugating ENZY; 1e-106
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A Length = 172 Back     alignment and structure
 Score =  301 bits (772), Expect = e-107
 Identities = 122/164 (74%), Positives = 147/164 (89%)

Query: 2   DESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEG 61
           DE++++ +S IP+LKT AGPRD++LW +RLKEEY +LI YV+NNK ADNDWFRLESNKEG
Sbjct: 8   DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEG 67

Query: 62  TKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFK 121
           T+WFG CW+ ++ LKYEF IEFDIPIT+PTTAPE+A+PELDGKTAKMYRGGKICL+DHFK
Sbjct: 68  TRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFK 127

Query: 122 PLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEKTE 165
           PLWARNVPKFG+AH MALGLGPWLAVEIP L+  G+I+++EK  
Sbjct: 128 PLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCN 171
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} Length = 168 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query166
3kpa_A168 Probable ubiquitin fold modifier conjugating ENZY; 100.0
2z6o_A172 UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, p 100.0
2h2y_A136 Ubiquitin-conjugating enzyme; structural genomics, 99.71
2fo3_A125 Ubiquitin-conjugating enzyme; SGC, UBC, structural 99.7
2a7l_A136 Hypothetical ubiquitin-conjugating enzyme LOC55284 99.7
2c2v_B154 Ubiquitin-conjugating enzyme E2 N; chaperone, heat 99.68
4gpr_A151 Ubiquitin-conjugating enzyme family protein; ubiqu 99.68
2ayv_A166 Ubiquitin-conjugating enzyme E2; structural genomi 99.68
1zdn_A158 Ubiquitin-conjugating enzyme E2S; structural genom 99.68
1z2u_A150 Ubiquitin-conjugating enzyme E2 2; PSI, secsg, pro 99.67
2r0j_A149 Ubiquitin carrier protein; ubiquitin conjugating, 99.67
2e2c_A156 Ubiquitin conjugating enzyme; ubiquitin conjugatio 99.67
2c4o_A165 Ubiquitin-conjugating enzyme E2 D2; thioesterifica 99.67
1jat_A155 Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, lig 99.66
3h8k_A164 Ubiquitin-conjugating enzyme E2 G2; alpha beta, al 99.66
1fxt_A149 Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NM 99.65
3k9o_A201 Ubiquitin-conjugating enzyme E2 K; E2-25K, complex 99.65
1yh2_A169 HSPC150 protein similar to ubiquitin-conjugating e 99.64
2ucz_A165 UBC7, ubiquitin conjugating enzyme; ubiquitin conj 99.64
1yrv_A169 Ubiquitin-conjugating ligase MGC351130; structural 99.64
2aak_A152 UBC1, ubiquitin conjugating enzyme; ubiquitin conj 99.64
3bzh_A194 Ubiquitin-conjugating enzyme E2 E1; structural gen 99.63
3rcz_B163 SUMO-conjugating enzyme UBC9; SUMO-like domain, pr 99.63
2bep_A159 Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 99.63
4ds2_A167 Ubiquitin-conjugating enzyme E2, putative; structu 99.63
2f4z_A193 Tgtwinscan_2721 - E2 domain; ubiquitin conjugating 99.62
2awf_A172 Ubiquitin-conjugating enzyme E2 G1; ligase, UBL co 99.61
2pwq_A216 Ubiquitin conjugating enzyme; structural genomics 99.61
3rz3_A183 Ubiquitin-conjugating enzyme E2 R1; ubiquitin conj 99.61
2y9m_A172 Ubiquitin-conjugating enzyme E2-21 kDa; ligase-tra 99.61
1ayz_A169 UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin 99.6
3e46_A253 Ubiquitin-conjugating enzyme E2-25 kDa; huntington 99.6
1i7k_A179 Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A 99.59
2gjd_A157 Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT 99.58
2f4w_A187 Ubiquitin-conjugating enzyme E2, J2; endoplasmic r 99.57
1tte_A215 Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiq 99.57
2a4d_A160 Ubiquitin-conjugating enzyme E2 variant 1; alterna 99.56
3fn1_B167 NEDD8-conjugating enzyme UBE2F; ligase, ATP-bindin 99.56
1wzv_A155 Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A 99.56
1jat_B138 Ubiquitin-conjugating enzyme variant MMS2; UEV, li 99.55
1y8x_A160 Ubiquitin-conjugating enzyme E2 M; ubiquitin-conju 99.54
1zuo_A186 Hypothetical protein LOC92912; ligase, ubiquitin-c 99.54
2grr_A161 Ubiquitin-conjugating enzyme E2 I; ubiquitin, conj 99.54
2onu_A152 Ubiquitin-conjugating enzyme, putative; UBC, plasm 99.54
2z5d_A179 Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, lig 99.53
1yf9_A171 Ubiquitin carrier protein 4; SGPP, structural geno 99.52
2hlw_A170 Ubiquitin-conjugating enzyme E2 variant 1; ubiquit 99.51
2nvu_C180 NEDD8-conjugating enzyme UBC12; multifunction macr 99.51
3o2u_A190 NEDD8-conjugating enzyme UBC12; E2 conjugase, liga 99.51
1c4z_D154 UBCH7, ubiquitin conjugating enzyme E2; bilobal st 99.48
2q0v_A156 Ubiquitin-conjugating enzyme E2, putative; malaria 99.47
4ddg_A 399 Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI 99.47
3ceg_A323 Baculoviral IAP repeat-containing protein 6; apopt 99.41
3r3q_A162 Suppressor protein STP22 of temperature-sensitive 97.98
3obq_A146 Tumor susceptibility gene 101 protein; protein tra 97.37
1ukx_A137 GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple 95.31
2ebm_A128 RWD domain-containing protein 1; alpha+beta sandwi 94.03
2yz0_A138 Serine/threonine-protein kinase GCN2; A-B-B-B-B-A- 93.23
2ebk_A128 RWD domain-containing protein 3; alpha+beta sandwi 93.05
2day_A128 Ring finger protein 25; ligase, metal-binding, UB1 92.99
2dax_A152 Protein C21ORF6; RWD domain, alpha+beta sandwich f 92.8
2daw_A154 RWD domain containing protein 2; alpha+beta sandwi 91.2
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4 Back     alignment and structure
Probab=100.00  E-value=9.5e-95  Score=583.57  Aligned_cols=160  Identities=64%  Similarity=1.272  Sum_probs=156.0

Q ss_pred             CChhhhhhhccccceeccCCCCCCChHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeeceecccceeEE
Q psy13700          1 MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQ   80 (166)
Q Consensus         1 ~d~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~~~~~~kyeF~   80 (166)
                      |+++.+++|++||||+|||||||+++|++||||||++||+||++||++|||||+++||++||+|+|+|||+|++.+|+|+
T Consensus         9 ~~~~~~~~~~~ipll~t~agPrd~~~w~~RlkeEy~alI~yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFk   88 (168)
T 3kpa_A            9 MEPSVKESVSRIPLLKTKAGPRDGDKWTARLKEEYASLITYVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFE   88 (168)
T ss_dssp             ---CHHHHHTTSCCCCCCCCTTSTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEE
T ss_pred             cChHHHHHHhhCceeeccCCCCCHHHHHHHHHHHHHHHHHHHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEE
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCCCCCeeecCCCCCcccccccCceeecCCCCchhhcccCCchhHHHHHhhcccchhhhhhhhHHHhccccc
Q psy13700         81 IEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKY  160 (166)
Q Consensus        81 lefdIP~tYP~tpPei~fpeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i~~  160 (166)
                      |+|+||++||++||+|+||++||+|+||||||+||||+||+|+|+|||||||||||||||||||||||||+||++|+|++
T Consensus        89 LefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahalalgl~pwla~eiP~lv~~g~i~~  168 (168)
T 3kpa_A           89 MNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVLALGLGPWLSIEVPAMVEEGYLKP  168 (168)
T ss_dssp             EEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHHHHTHHHHHHHHHHHHHHHTSCCC
T ss_pred             EEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccccchhhHhcCCchhHHHHHHhccchHHhhhhHHHHHcCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999985
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A Back     alignment and structure
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7} Back     alignment and structure
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1 Back     alignment and structure
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica} Back     alignment and structure
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1 Back     alignment and structure
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ... Back     alignment and structure
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A Back     alignment and structure
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1 Back     alignment and structure
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A Back     alignment and structure
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F Back     alignment and structure
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A Back     alignment and structure
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A Back     alignment and structure
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A Back     alignment and structure
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1 Back     alignment and structure
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A Back     alignment and structure
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A Back     alignment and structure
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1 Back     alignment and structure
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A Back     alignment and structure
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi} Back     alignment and structure
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1 Back     alignment and structure
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A Back     alignment and structure
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii} Back     alignment and structure
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A Back     alignment and structure
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A Back     alignment and structure
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 Back     alignment and structure
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A* Back     alignment and structure
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B Back     alignment and structure
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1 Back     alignment and structure
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A Back     alignment and structure
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A Back     alignment and structure
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A Back     alignment and structure
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B Back     alignment and structure
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A Back     alignment and structure
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A Back     alignment and structure
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum} Back     alignment and structure
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens} Back     alignment and structure
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1 Back     alignment and structure
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens} Back     alignment and structure
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1 Back     alignment and structure
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C Back     alignment and structure
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C Back     alignment and structure
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C Back     alignment and structure
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A Back     alignment and structure
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens} Back     alignment and structure
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A* Back     alignment and structure
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A Back     alignment and structure
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3 Back     alignment and structure
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A Back     alignment and structure
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3 Back     alignment and structure
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 166
d2in1a1162 d.20.1.4 (A:3-164) Ufm1-conjugating enzyme 1, UFC1 1e-113
>d2in1a1 d.20.1.4 (A:3-164) Ufm1-conjugating enzyme 1, UFC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 162 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: UBC-like
superfamily: UBC-like
family: UFC1-like
domain: Ufm1-conjugating enzyme 1, UFC1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  315 bits (808), Expect = e-113
 Identities = 122/162 (75%), Positives = 147/162 (90%)

Query: 2   DESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEG 61
           DE++++ +S IP+LKT AGPRD++LW +RLKEEY +LI YV+NNK ADNDWFRLESNKEG
Sbjct: 1   DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEG 60

Query: 62  TKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFK 121
           T+WFG CW+ ++ LKYEF IEFDIPIT+PTTAPE+A+PELDGKTAKMYRGGKICL+DHFK
Sbjct: 61  TRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFK 120

Query: 122 PLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQEK 163
           PLWARNVPKFG+AH MALGLGPWLAVEIP L+  G+I+++EK
Sbjct: 121 PLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEK 162

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query166
d2in1a1162 Ufm1-conjugating enzyme 1, UFC1 {Human (Homo sapie 100.0
d2a7la1117 Ubiquitin-protein ligase W (E2 W) {Human (Homo sap 99.67
d1z2ua1147 Ubiquitin conjugating enzyme, UBC {Caenorhabditis 99.64
d2fo3a1109 Putative ubiquitin-conjugating enzyme, E2 domain { 99.64
d1yh2a1154 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.64
d2f4za1161 Hypothetical protein Tgtwinscan_2721, E2 domain {T 99.63
d1z3da1149 Ubiquitin conjugating enzyme, UBC {Nematode (Caeno 99.63
d2awfa1125 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.62
d2bepa1154 Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain 99.6
d1ayza_153 Ubiquitin conjugating enzyme, UBC {Baker's yeast ( 99.59
d1jatb_136 Ubiquitin conjugating enzyme, UBC {Baker's yeast ( 99.59
d2e2ca_156 Ubiquitin conjugating enzyme, UBC {Clam (Spisula s 99.58
d1i7ka_146 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.57
d1zdna1151 Ubiquitin conjugating enzyme, UBC {Human(Homo sapi 99.56
d1yrva1148 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.55
d1y6la_148 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.55
d2ucza_164 Ubiquitin conjugating enzyme, UBC {Baker's yeast ( 99.54
d1j7db_149 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.54
d1jata_152 Ubiquitin conjugating enzyme, UBC {Baker's yeast ( 99.53
d1zuoa1162 Ubiquitin-conjugating enzyme E2 Q2, C-terminal dom 99.53
d1wzva1150 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.53
d1fzya_149 Ubiquitin conjugating enzyme, UBC {Baker's yeast ( 99.51
d1c4zd_144 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.5
d2a4da1139 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.5
d1pzva_161 Ubiquitin conjugating enzyme, UBC {Nematode (Caeno 99.49
d2uyza1156 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.49
d2f4wa1157 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.44
d1yf9a1158 Ubiquitin conjugating enzyme, UBC {Leishmania majo 99.44
d2z5da1152 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.39
d1y8xa1157 Ubiquitin conjugating enzyme, UBC {Human (Homo sap 99.35
d1s1qa_141 Tumor susceptibility gene 101 (TSG101) {Human (Hom 98.43
d1uzxa_152 Vacuolar protein sorting-associated {Baker's yeast 97.78
d2daya1115 E3 ubiquitin-protein ligase RNF25 {Human (Homo sap 93.05
d1ukxa_137 EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mu 90.83
d2daxa1140 Uncharacterized protein C21orf6 {Human (Homo sapie 89.35
d2dawa1141 RWD domain-containing protein 2 {Human (Homo sapie 89.06
>d2in1a1 d.20.1.4 (A:3-164) Ufm1-conjugating enzyme 1, UFC1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: UBC-like
superfamily: UBC-like
family: UFC1-like
domain: Ufm1-conjugating enzyme 1, UFC1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-104  Score=633.45  Aligned_cols=162  Identities=75%  Similarity=1.389  Sum_probs=160.6

Q ss_pred             ChhhhhhhccccceeccCCCCCCChHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeeceecccceeEEE
Q psy13700          2 DESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQI   81 (166)
Q Consensus         2 d~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~~~~~~kyeF~l   81 (166)
                      |++||+||++||||+|+|||||+++|++||||||++||+||+|||++|||||+|+||++||||+|+|||+||+.+|||+|
T Consensus         1 d~~tk~t~~~IPll~t~AGPrD~e~W~~RLKEEy~aLI~Yv~nNK~~dndWF~lesn~~GT~W~GkCWyihnl~kYeFd~   80 (162)
T d2in1a1           1 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDI   80 (162)
T ss_dssp             CCHHHHHTTTSCCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECTTSSEEEEEEEEEETTEEEEEEE
T ss_pred             ChhHHHHHHhCccccccCCCCCHHHHHHHHHHHHHHHHHHHHhcccccCCeEEeccCCCCCeeeceeeEEEeeeEEEEEE
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCCCCeeecCCCCCcccccccCceeecCCCCchhhcccCCchhHHHHHhhcccchhhhhhhhHHHhcccccc
Q psy13700         82 EFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKYQ  161 (166)
Q Consensus        82 efdIP~tYP~tpPei~fpeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i~~~  161 (166)
                      +||||+|||+|||||++|+|||||+|||||||||||+||+|||+|||||||||||||||||||||||||+||++|+|+|+
T Consensus        81 eFdIP~tYP~t~pEi~lPeLdGKTaKMYRGGkIClt~HFkPLWarN~PkfGIaHalaLGL~PWLA~EiP~Lv~~G~i~~k  160 (162)
T d2in1a1          81 EFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHK  160 (162)
T ss_dssp             EEECCTTTTTSCCCCBCGGGSSSCSSSCGGGBCCCCTTSHHHHHTTTTSCCHHHHHHHTHHHHHHHHHHHHHHTTSCCCS
T ss_pred             EeccCCCCCCCCcceeccccCCchhhhhcCceeeccccchhhhhhcCCchhHHHHHHhccchhhhhhhHHHHHcCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc
Q psy13700        162 EK  163 (166)
Q Consensus       162 ~~  163 (166)
                      ++
T Consensus       161 ~k  162 (162)
T d2in1a1         161 EK  162 (162)
T ss_dssp             CC
T ss_pred             CC
Confidence            75
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]} Back     information, alignment and structure
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]} Back     information, alignment and structure
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]} Back     information, alignment and structure
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]} Back     information, alignment and structure
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]} Back     information, alignment and structure
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]} Back     information, alignment and structure
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]} Back     information, alignment and structure
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]} Back     information, alignment and structure
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]} Back     information, alignment and structure
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]} Back     information, alignment and structure
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]} Back     information, alignment and structure
>d1y6la_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch8 [TaxId: 9606]} Back     information, alignment and structure
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]} Back     information, alignment and structure
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]} Back     information, alignment and structure
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]} Back     information, alignment and structure
>d1zuoa1 d.20.1.1 (A:201-362) Ubiquitin-conjugating enzyme E2 Q2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wzva1 d.20.1.1 (A:2-151) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 L6 [TaxId: 9606]} Back     information, alignment and structure
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]} Back     information, alignment and structure
>d1c4zd_ d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch7 [TaxId: 9606]} Back     information, alignment and structure
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]} Back     information, alignment and structure
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]} Back     information, alignment and structure
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]} Back     information, alignment and structure
>d2f4wa1 d.20.1.1 (A:12-168) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 J2 [TaxId: 9606]} Back     information, alignment and structure
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]} Back     information, alignment and structure
>d1s1qa_ d.20.1.2 (A:) Tumor susceptibility gene 101 (TSG101) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzxa_ d.20.1.2 (A:) Vacuolar protein sorting-associated {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure