Psyllid ID: psy13753

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAAPDEEGRPLFITGIIKVRLPYVVTFTRLMTSF
Secondary Structure (PSIPRED)
cccccEEEEEEEccccccccccccEEEEcccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccEEEEEccEEcccEEEEEEccccccccccccccccccccccEEEEEccccccEEccccccccccccccccccccccEEEccccccccccccccHHHHHcccccccccccccccccccccccccccccEEEccccEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEccccccEccccccEcccccccEEEEcccccEEcHHHHcccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEHHcccc
Coil and Loop (DISEMBL)
mdtshqfqeytykkitpcdicsqvlrghtrqglkcrlcktnvhvdcqekvpakcqpksrllrrqkstseietrvtpavpdeegrLTLFITGIKVRLPYVVtftrvpgsvspgptmraagklsshelktysrqnsprlvvtspggpgghtrqglkcrlcktnvhvdcqekvpakcqpksrllrrqkstseietrvtpaapdeegrplFITGIIKVRLPYVVTFTRLMTSF
Flexible Loop (DISEMBL)
mdtshqfqeytykkitpcdicSQVLRGHTRQGLKCRLCKTnvhvdcqekvpakcqpksrllrrqkstseietrvtpavpdeegrLTLFItgikvrlpyVVTFtrvpgsvspgptMRAAGKLSSHELktysrqnsprlvvtspggpgghtrqgLKCRLCKTNVhvdcqekvpakcqpksrllrrqkstseietrvtpaapdeegrplfitgiikvrlpYVVTFTRLMTSF
Low Complexity Region (SEG)
MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAAPDEEGRPLFITGIIKVRLPYVVTFTRLMTSF
Disordered region (IsUnstruct)
*******QEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV********************************GRLTLFITGIKVRLPYVVTFTRVP*********************************************GLKCRLCKTNVHVDCQE************************************PLFITGIIKVRLPYVVTFTRL****
Disordered Region (DISOPRED)
**TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ****************TRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKC***************************************VRLPYVVTFTRLM***
Disordered Region (DISEMBL)
********EYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSP*********GLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAAPDEEGRPLFITGIIKVRLPYVVTFTRLMTSF
Disordered Region (DISPRO)
**TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP*********************************************************TMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKST*******************FITGIIKVRLPYVVTFTRLMTSF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAAPDEEGRPLFITGIIKVRLPYVVTFTRLMTSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
P13678	634	Protein kinase C OS=Droso	no	N/A	0.751	0.271	0.295	3e-10
Q6ZMT1	411	SH3 and cysteine-rich dom	yes	N/A	0.200	0.111	0.434	1e-09
Q8R1B0	408	SH3 and cysteine-rich dom	yes	N/A	0.196	0.110	0.434	4e-09
Q9WTQ0	707	Protein kinase C theta ty	yes	N/A	0.480	0.155	0.344	2e-08
P28867	674	Protein kinase C delta ty	no	N/A	0.314	0.106	0.384	3e-08
Q5PU49	674	Protein kinase C delta ty	no	N/A	0.030	0.010	0.442	4e-08
Q64617	683	Protein kinase C eta type	no	N/A	0.026	0.008	0.444	4e-08
P23298	683	Protein kinase C eta type	no	N/A	0.026	0.008	0.444	4e-08
P09215	673	Protein kinase C delta ty	no	N/A	0.048	0.016	0.442	5e-08
Q04759	706	Protein kinase C theta ty	no	N/A	0.043	0.014	0.442	6e-08

>sp|P13678|KPC3_DROME Protein kinase C OS=Drosophila melanogaster GN=Pkc98E PE=2 SV=1

 Score = 65.5 bits (158), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 24/196 (12%)

Query: 5   HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQ 64
           H+F  ++YK+ T CD C  +L G  +QGL+C  C  NVH  CQ+ V   C   +      
Sbjct: 147 HRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHKRCQKNVANTCGINT------ 200

Query: 65  KSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSH 124
           K  +EI + +  +   ++ R + ++        Y  +     G  +PG + R+   LS  
Sbjct: 201 KQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYGASLG-ADGDGAPGQSFRSCA-LSVD 258

Query: 125 ELKT--------YSRQNSPRLVVTSPGGPG--GHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
            L T        Y+  +   L VT  GG G  G TR G KC L   N       KV  K 
Sbjct: 259 SLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPG-KCSLLDFNF-----IKVLGKG 312

Query: 175 QPKSRLLRRQKSTSEI 190
                +L  +K T EI
Sbjct: 313 SFGKVMLAEKKGTDEI 328

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q6ZMT1|STAC2_HUMAN SH3 and cysteine-rich domain-containing protein 2 OS=Homo sapiens GN=STAC2 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 38/46 (82%)

Query: 5   HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV 50
           H FQE+ +K+ +PC++C Q++ G+++QGL+C++CK +VH+ C E++
Sbjct: 111 HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEI 156

Homo sapiens (taxid: 9606)

>sp|Q8R1B0|STAC2_MOUSE SH3 and cysteine-rich domain-containing protein 2 OS=Mus musculus GN=Stac2 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 37/46 (80%)

Query: 5   HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV 50
           H FQE+ +K+ +PC++C Q++ G+++QGL+C+ CK +VH+ C E++
Sbjct: 111 HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKTCKVSVHLWCSEEI 156

Mus musculus (taxid: 10090)

>sp|Q9WTQ0|KPCT_RAT Protein kinase C theta type OS=Rattus norvegicus GN=Prkcq PE=1 SV=2

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D  H+F+ Y YK  T C+ C  +L G  RQGLKC  C  NVH  CQ KV   C    +L
Sbjct: 228 IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGINQKL 287

Query: 61  LRRQKSTSEIETRVTPAVPDEEGRLTLFITG-IKVRLPYVV-TFTRVPGSVSPGPT 114
           +    +  E  T+    + D E    +F  G I++  P  + + TR P   +PG +
Sbjct: 288 MAEALAMIE-STQQARTLRDSE---HIFREGPIEISFPRSIKSETRPPCVPTPGKS 339

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol 1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2 (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases, is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets, regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or phosphatidylinositol (By similarity). Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to phosphorylate PKB/AKT1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P28867|KPCD_MOUSE Protein kinase C delta type OS=Mus musculus GN=Prkcd PE=1 SV=3

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D  H+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C    +L
Sbjct: 227 IDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKL 286

Query: 61  LRR------QKSTSEIET 72
           L        Q+S+ +++T
Sbjct: 287 LAEALNQVTQRSSRKLDT 304

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. Upon DNA damage, activates the promoter of the death-promoting transcription factor BCLAF1/Btf to trigger BCLAF1-mediated p53/TP53 gene transcription and apoptosis. In response to oxidative stress, interact with and activate CHUK/IKKA in the nucleus, causing the phosphorylation of p53/TP53. In the case of ER stress or DNA damage-induced apoptosis, can form a complex with the tyrosine-protein kinase ABL1 which trigger apoptosis independently of p53/TP53. In cytosol can trigger apoptosis by activating MAPK11 or MAPK14, inhibiting AKT1 and decreasing the level of X-linked inhibitor of apoptosis protein (XIAP), whereas in nucleus induces apoptosis via the activation of MAPK8 or MAPK9. Upon ionizing radiation treatment, is required for the activation of the apoptosis regulators BAX and BAK, which trigger the mitochondrial cell death pathway. Can phosphorylate MCL1 and target it for degradation which is sufficient to trigger for BAX activation and apoptosis. Is required for the control of cell cycle progression both at G1/S and G2/M phases. Mediates phorbol 12-myristate 13-acetate (PMA)-induced inhibition of cell cycle progression at G1/S phase by up-regulating the CDK inhibitor CDKN1A/p21 and inhibiting the cyclin CCNA2 promoter activity. In response to UV irradiation can phosphorylate CDK1, which is important for the G2/M DNA damage checkpoint activation. Can protect glioma cells from the apoptosis induced by TNFSF10/TRAIL, probably by inducing increased phosphorylation and subsequent activation of AKT1. Can also act as tumor suppressor upon mitogenic stimulation with PMA or TPA. In N-formyl-methionyl-leucyl-phenylalanine (fMLP)-treated cells, is required for NCF1 (p47-phox) phosphorylation and activation of NADPH oxidase activity, and regulates TNF-elicited superoxide anion production in neutrophils, by direct phosphorylation and activation of NCF1 or indirectly through MAPK1/3 (ERK1/2) signaling pathways. May also play a role in the regulation of NADPH oxidase activity in eosinophil after stimulation with IL5, leukotriene B4 or PMA. In collagen-induced platelet aggregation, acts a negative regulator of filopodia formation and actin polymerization by interacting with and negatively regulating VASP phosphorylation. Downstream of PAR1, PAR4 and CD36/GP4 receptors, regulates differentially platelet dense granule secretion; acts as a positive regulator in PAR-mediated granule secretion, whereas it negatively regulates CD36/GP4-mediated granule release. Phosphorylates MUC1 in the C-terminal and regulates the interaction between MUC1 and beta-catenin.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q5PU49|KPCD_CANFA Protein kinase C delta type OS=Canis familiaris GN=PRKCD PE=2 SV=1

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 34/61 (55%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D  H+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  CQ+KV   C    +L
Sbjct: 227 IDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCQKKVANLCGINQKL 286

Query: 61  L 61
           L
Sbjct: 287 L 287

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. Upon DNA damage, activates the promoter of the death-promoting transcription factor BCLAF1/Btf to trigger BCLAF1-mediated p53/TP53 gene transcription and apoptosis. In response to oxidative stress, interact with and activate CHUK/IKKA in the nucleus, causing the phosphorylation of p53/TP53. In the case of ER stress or DNA damage-induced apoptosis, can form a complex with the tyrosine-protein kinase ABL1 which trigger apoptosis independently of p53/TP53. In cytosol can trigger apoptosis by activating MAPK11 or MAPK14, inhibiting AKT1 and decreasing the level of X-linked inhibitor of apoptosis protein (XIAP), whereas in nucleus induces apoptosis via the activation of MAPK8 or MAPK9. Upon ionizing radiation treatment, is required for the activation of the apoptosis regulators BAX and BAK, which trigger the mitochondrial cell death pathway. Can phosphorylate MCL1 and target it for degradation which is sufficient to trigger for BAX activation and apoptosis. Is required for the control of cell cycle progression both at G1/S and G2/M phases. Mediates phorbol 12-myristate 13-acetate (PMA)-induced inhibition of cell cycle progression at G1/S phase by up-regulating the CDK inhibitor CDKN1A/p21 and inhibiting the cyclin CCNA2 promoter activity. In response to UV irradiation can phosphorylate CDK1, which is important for the G2/M DNA damage checkpoint activation. Can protect glioma cells from the apoptosis induced by TNFSF10/TRAIL, probably by inducing increased phosphorylation and subsequent activation of AKT1. Can also act as tumor suppressor upon mitogenic stimulation with PMA or TPA. In N-formyl-methionyl-leucyl-phenylalanine (fMLP)-treated cells, is required for NCF1 (p47-phox) phosphorylation and activation of NADPH oxidase activity, and regulates TNF-elicited superoxide anion production in neutrophils, by direct phosphorylation and activation of NCF1 or indirectly through MAPK1/3 (ERK1/2) signaling pathways. May also play a role in the regulation of NADPH oxidase activity in eosinophil after stimulation with IL5, leukotriene B4 or PMA. In collagen-induced platelet aggregation, acts a negative regulator of filopodia formation and actin polymerization by interacting with and negatively regulating VASP phosphorylation. Downstream of PAR1, PAR4 and CD36/GP4 receptors, regulates differentially platelet dense granule secretion; acts as a positive regulator in PAR-mediated granule secretion, whereas it negatively regulates CD36/GP4-mediated granule release. Phosphorylates MUC1 in the C-terminal and regulates the interaction between MUC1 and beta-catenin.

Canis familiaris (taxid: 9615)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q64617|KPCL_RAT Protein kinase C eta type OS=Rattus norvegicus GN=Prkch PE=2 SV=1

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
           ++  H+F  + YK  T CD C  +L G  RQGL+C++CK NVH+ CQ  V   C
Sbjct: 242 INIPHKFNVHNYKVPTFCDHCGSLLWGIMRQGLQCKICKMNVHIRCQANVAPNC 295

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in the regulation of cell differentiation in keratinocytes and pre-B cell receptor, mediates regulation of epithelial tight junction integrity and foam cell formation, and is required for glioblastoma proliferation and apoptosis prevention in MCF-7 cells. In keratinocytes, binds and activates the tyrosine kinase FYN, which in turn blocks epidermal growth factor receptor (EGFR) signaling and leads to keratinocyte growth arrest and differentiation. Associates with the cyclin CCNE1-CDK2-CDKN1B complex and inhibits CDK2 kinase activity, leading to RB1 dephosphorylation and thereby G1 arrest in keratinocytes. In association with RALA activates actin depolymerization, which is necessary for keratinocyte differentiation. In the pre-B cell receptor signaling, functions downstream of BLNK by up-regulating IRF4, which in turn activates L chain gene rearrangement. Regulates epithelial tight junctions (TJs) by phosphorylating occludin (OCLN) on threonine residues, which is necessary for the assembly and maintenance of TJs. In association with PLD2 and via TLR4 signaling, is involved in lipopolysaccharide (LPS)-induced RGS2 down-regulation and foam cell formation. Upon PMA stimulation, mediates glioblastoma cell proliferation by activating the mTOR pathway, the PI3K/AKT pathway and the ERK1-dependent phosphorylation of ELK1. Involved in the protection of glioblastoma cells from irradiation-induced apoptosis by preventing caspase-9 activation. In camptothecin-treated MCF-7 cells, regulates NF-kappa-B upstream signaling by activating IKBKB, and confers protection against DNA damage-induced apoptosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P23298|KPCL_MOUSE Protein kinase C eta type OS=Mus musculus GN=Prkch PE=1 SV=2

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
           ++  H+F  + YK  T CD C  +L G  RQGL+C++CK NVH+ CQ  V   C
Sbjct: 242 INIPHKFNVHNYKVPTFCDHCGSLLWGIMRQGLQCKICKMNVHIRCQANVAPNC 295

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in the regulation of cell differentiation in keratinocytes and pre-B cell receptor, mediates regulation of epithelial tight junction integrity and foam cell formation, and is required for glioblastoma proliferation and apoptosis prevention in MCF-7 cells. In keratinocytes, binds and activates the tyrosine kinase FYN, which in turn blocks epidermal growth factor receptor (EGFR) signaling and leads to keratinocyte growth arrest and differentiation. Associates with the cyclin CCNE1-CDK2-CDKN1B complex and inhibits CDK2 kinase activity, leading to RB1 dephosphorylation and thereby G1 arrest in keratinocytes. In association with RALA activates actin depolymerization, which is necessary for keratinocyte differentiation. In the pre-B cell receptor signaling, functions downstream of BLNK by up-regulating IRF4, which in turn activates L chain gene rearrangement. Regulates epithelial tight junctions (TJs) by phosphorylating occludin (OCLN) on threonine residues, which is necessary for the assembly and maintenance of TJs. In association with PLD2 and via TLR4 signaling, is involved in lipopolysaccharide (LPS)-induced RGS2 down-regulation and foam cell formation. Upon PMA stimulation, mediates glioblastoma cell proliferation by activating the mTOR pathway, the PI3K/AKT pathway and the ERK1-dependent phosphorylation of ELK1. Involved in the protection of glioblastoma cells from irradiation-induced apoptosis by preventing caspase-9 activation. In camptothecin-treated MCF-7 cells, regulates NF-kappa-B upstream signaling by activating IKBKB, and confers protection against DNA damage-induced apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P09215|KPCD_RAT Protein kinase C delta type OS=Rattus norvegicus GN=Prkcd PE=1 SV=1

 Score = 58.2 bits (139), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 34/61 (55%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D  H+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C    +L
Sbjct: 227 IDMPHRFKVYNYMSPTFCDHCGTLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKL 286

Query: 61  L 61
           L
Sbjct: 287 L 287

Truncated isoform 2 is inactive.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q04759|KPCT_HUMAN Protein kinase C theta type OS=Homo sapiens GN=PRKCQ PE=1 SV=3

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 34/61 (55%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D  H+F+ Y YK  T C+ C  +L G  RQGLKC  C  NVH  CQ KV   C    +L
Sbjct: 228 IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGINQKL 287

Query: 61  L 61
           +
Sbjct: 288 M 288

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol 1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2 (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases, is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets, regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or phosphatidylinositol. Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to phosphorylate PKB/AKT1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
328712224	994	PREDICTED: hypothetical protein LOC10016	0.314	0.072	0.824	4e-30
189240760	663	PREDICTED: similar to AGAP005257-PA [Tri	0.366	0.126	0.694	5e-29
270013028	705	hypothetical protein TcasGA2_TC010970 [T	0.366	0.119	0.694	6e-29
242015653	755	stac, putative [Pediculus humanus corpor	0.310	0.094	0.791	3e-27
357609974	272	hypothetical protein KGM_00433 [Danaus p	0.340	0.286	0.737	9e-26
195334619	345	GM21612 [Drosophila sechellia] gi|194125	0.318	0.211	0.702	5e-25
442623779	546	CG43729, isoform E [Drosophila melanogas	0.318	0.133	0.702	6e-25
442623787	1287	CG43729, isoform K [Drosophila melanogas	0.318	0.056	0.702	6e-25
195488566	552	GE11704 [Drosophila yakuba] gi|194178470	0.318	0.132	0.702	7e-25
161077106	1030	CG43729, isoform B [Drosophila melanogas	0.318	0.070	0.702	7e-25

>gi|328712224|ref|XP_001943165.2| PREDICTED: hypothetical protein LOC100163038 [Acyrthosiphon pisum]

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/74 (82%), Positives = 68/74 (91%)

Query: 2   DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLL 61
           +T+HQFQEYTYKKITPCD CSQVLRGHTRQGLKCR+CK NVH+DCQEKV  +CQ KSRLL
Sbjct: 518 ETAHQFQEYTYKKITPCDFCSQVLRGHTRQGLKCRVCKMNVHLDCQEKVTTRCQVKSRLL 577

Query: 62  RRQKSTSEIETRVT 75
           RRQKSTSEIET++ 
Sbjct: 578 RRQKSTSEIETKMA 591

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240760|ref|XP_969222.2| PREDICTED: similar to AGAP005257-PA [Tribolium castaneum]

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 71/85 (83%), Gaps = 1/85 (1%)

Query: 4   SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 63
           +H FQEYTYKKITPCD+CSQVLRGHTRQGLKCR+CK NVH+DCQ+K  +KCQ K RLLRR
Sbjct: 450 AHNFQEYTYKKITPCDVCSQVLRGHTRQGLKCRICKMNVHLDCQDKA-SKCQTKQRLLRR 508

Query: 64  QKSTSEIETRVTPAVPDEEGRLTLF 88
           QKSTSEIETR+     ++E +  ++
Sbjct: 509 QKSTSEIETRIQDVTAEDEKKNEMY 533

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013028|gb|EFA09476.1| hypothetical protein TcasGA2_TC010970 [Tribolium castaneum]

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 71/85 (83%), Gaps = 1/85 (1%)

Query: 4   SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 63
           +H FQEYTYKKITPCD+CSQVLRGHTRQGLKCR+CK NVH+DCQ+K  +KCQ K RLLRR
Sbjct: 495 AHNFQEYTYKKITPCDVCSQVLRGHTRQGLKCRICKMNVHLDCQDKA-SKCQTKQRLLRR 553

Query: 64  QKSTSEIETRVTPAVPDEEGRLTLF 88
           QKSTSEIETR+     ++E +  ++
Sbjct: 554 QKSTSEIETRIQDVTAEDEKKNEMY 578

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015653|ref|XP_002428465.1| stac, putative [Pediculus humanus corporis] gi|212513082|gb|EEB15727.1| stac, putative [Pediculus humanus corporis]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/72 (79%), Positives = 65/72 (90%), Gaps = 1/72 (1%)

Query: 3   TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLR 62
           ++H FQ+YTYKKITPCD+CSQVLRGHTRQGLKCR+CK NVH DCQ K P KCQ KSRLLR
Sbjct: 403 SAHAFQDYTYKKITPCDVCSQVLRGHTRQGLKCRVCKLNVHFDCQNKAP-KCQQKSRLLR 461

Query: 63  RQKSTSEIETRV 74
           RQKSTSEI+T++
Sbjct: 462 RQKSTSEIDTKL 473

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357609974|gb|EHJ66765.1| hypothetical protein KGM_00433 [Danaus plexippus]

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)

Query: 4   SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 63
           +H FQEYTYKKITPCD+CSQVLRGHTRQGL+CR+CK NVH DC  +V  KCQ KS+LLRR
Sbjct: 123 AHNFQEYTYKKITPCDVCSQVLRGHTRQGLRCRMCKMNVHTDCMPQV-GKCQTKSKLLRR 181

Query: 64  QKSTSEIET-RVTPAVPDEE 82
           QKSTSEIE  RV  +  DEE
Sbjct: 182 QKSTSEIEAHRVQESAFDEE 201

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195334619|ref|XP_002033975.1| GM21612 [Drosophila sechellia] gi|194125945|gb|EDW47988.1| GM21612 [Drosophila sechellia]

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D SH  QEYTYKKIT CD+CSQ+LRGHTRQGL+CR+CK N H DC   +P +CQPK +L
Sbjct: 105 LDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLP-RCQPKQKL 163

Query: 61  LRRQKSTSEIETRV 74
           LRRQKSTSE+E RV
Sbjct: 164 LRRQKSTSELENRV 177

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442623779|ref|NP_001097327.2| CG43729, isoform E [Drosophila melanogaster] gi|440214410|gb|ABV53810.2| CG43729, isoform E [Drosophila melanogaster]

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D SH  QEYTYKKIT CD+CSQ+LRGHTRQGL+CR+CK N H DC   +P +CQPK +L
Sbjct: 103 LDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLP-RCQPKQKL 161

Query: 61  LRRQKSTSEIETRV 74
           LRRQKSTSE+E RV
Sbjct: 162 LRRQKSTSELENRV 175

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442623787|ref|NP_001260997.1| CG43729, isoform K [Drosophila melanogaster] gi|440214414|gb|AGB93529.1| CG43729, isoform K [Drosophila melanogaster]

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D SH  QEYTYKKIT CD+CSQ+LRGHTRQGL+CR+CK N H DC   +P +CQPK +L
Sbjct: 916 LDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLP-RCQPKQKL 974

Query: 61  LRRQKSTSEIETRV 74
           LRRQKSTSE+E RV
Sbjct: 975 LRRQKSTSELENRV 988

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195488566|ref|XP_002092369.1| GE11704 [Drosophila yakuba] gi|194178470|gb|EDW92081.1| GE11704 [Drosophila yakuba]

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D SH  QEYTYKKIT CD+CSQ+LRGHTRQGL+CR+CK N H DC   +P +CQPK +L
Sbjct: 444 LDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLP-RCQPKQKL 502

Query: 61  LRRQKSTSEIETRV 74
           LRRQKSTSE+E RV
Sbjct: 503 LRRQKSTSELENRV 516

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161077106|ref|NP_001097325.1| CG43729, isoform B [Drosophila melanogaster] gi|157400343|gb|ABV53808.1| CG43729, isoform B [Drosophila melanogaster]

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
           +D SH  QEYTYKKIT CD+CSQ+LRGHTRQGL+CR+CK N H DC   +P +CQPK +L
Sbjct: 916 LDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLP-RCQPKQKL 974

Query: 61  LRRQKSTSEIETRV 74
           LRRQKSTSE+E RV
Sbjct: 975 LRRQKSTSELENRV 988

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
FB|FBgn0263980	1030	CG43729 [Drosophila melanogast	0.318	0.070	0.702	3.7e-25
FB|FBgn0038603	836	PKD "Protein Kinase D" [Drosop	0.829	0.227	0.278	1e-10
WB|WBGene00011254	164	R12G8.1 [Caenorhabditis elegan	0.222	0.310	0.431	7.4e-08
UNIPROTKB|Q6ZMT1	411	STAC2 "SH3 and cysteine-rich d	0.323	0.180	0.346	5.7e-10
RGD|1310236	297	Prkd3 "protein kinase D3" [Rat	0.218	0.168	0.44	9.4e-06
MGI|MGI:2144518	408	Stac2 "SH3 and cysteine rich d	0.314	0.176	0.342	2.2e-09
UNIPROTKB|F1PAU7	407	STAC2 "Uncharacterized protein	0.318	0.179	0.373	2.9e-09
UNIPROTKB|E1BDE0	419	STAC2 "Uncharacterized protein	0.318	0.174	0.373	3.1e-09
UNIPROTKB|F1SHF1	234	PRKD1 "Uncharacterized protein	0.218	0.213	0.42	1.5e-05
UNIPROTKB|F1RUL3	697	PRKCQ "Uncharacterized protein	0.427	0.140	0.364	2.7e-07

FB|FBgn0263980 CG43729 [Drosophila melanogaster (taxid:7227)]

 Score = 298 (110.0 bits), Expect = 3.7e-25, P = 3.7e-25
 Identities = 52/74 (70%), Positives = 61/74 (82%)

Query:     1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
             +D SH  QEYTYKKIT CD+CSQ+LRGHTRQGL+CR+CK N H DC   +P +CQPK +L
Sbjct:   916 LDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLP-RCQPKQKL 974

Query:    61 LRRQKSTSEIETRV 74
             LRRQKSTSE+E RV
Sbjct:   975 LRRQKSTSELENRV 988

GO:0019992 "diacylglycerol binding" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0045793 "positive regulation of cell size" evidence=IGI

GO:0046331 "lateral inhibition" evidence=IMP

FB|FBgn0038603 PKD "Protein Kinase D" [Drosophila melanogaster (taxid:7227)]

 Score = 166 (63.5 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 58/208 (27%), Positives = 84/208 (40%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP-------K 57
             H    ++YK  T CD C ++L G  RQGLKC  C  N H  C  K+P  C         +
Sbjct:   105 HSLNVHSYKGPTFCDFCGEMLFGLVRQGLKCDGCGQNYHKRCVVKIPNNCNRSNDATSRR 164

Query:    58 SRLLRRQKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRA 117
             S  L+  +S S    +   +  D  GR     +   + +P     T   GS +    +R 
Sbjct:   165 SFTLQAPRSPSGSSQQSLVSTEDSTGRND---SSSSLNIPGRHQRTHSSGSRNGLMVLRI 221

Query:   118 AGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177
                   H   TY     P +         G  +QGL+CR C+ N H  C +KVP  C  +
Sbjct:   222 PHTFMVH---TYG---IPTVCQLCKKLLKGLFKQGLQCRDCQYNTHKKCMDKVPHDCTGE 275

Query:   178 SRL--LRRQKSTSEIETRVTPAAPDEEG 203
             ++L  L+ Q    E +        D +G
Sbjct:   276 AQLSQLQIQAGAKERDNFFREEFDDSDG 303

GO:0019992 "diacylglycerol binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

WB|WBGene00011254 R12G8.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 125 (49.1 bits), Expect = 7.4e-08, P = 7.4e-08
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query:     4 SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
             +H F ++ + + T CD C  +L G T+QG++C  C  NVH  CQEKV   C
Sbjct:   109 THHFNKHFFTRPTFCDHCGSMLYGLTKQGVQCTDCHANVHFRCQEKVLRNC 159

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

UNIPROTKB|Q6ZMT1 STAC2 "SH3 and cysteine-rich domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 160 (61.4 bits), Expect = 5.7e-10, P = 5.7e-10
 Identities = 26/75 (34%), Positives = 49/75 (65%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP-AKCQPKSRLLRR 63
             H FQE+ +K+ +PC++C Q++ G+++QGL+C++CK +VH+ C E++   +C  K+    R
Sbjct:   111 HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFR 170

Query:    64 QKSTSEIETRVTPAV 78
             +  +S +     P V
Sbjct:   171 RNFSSPLLVHEPPPV 185

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1310236 Prkd3 "protein kinase D3" [Rattus norvegicus (taxid:10116)]

 Score = 125 (49.1 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
             H F  ++Y + T C  C ++L+G  RQGL+C+ CK N H  C  KVP  C
Sbjct:   168 HTFAVHSYGRPTICQYCKRLLKGLFRQGLQCKDCKFNCHKRCASKVPRDC 217

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

MGI|MGI:2144518 Stac2 "SH3 and cysteine rich domain 2" [Mus musculus (taxid:10090)]

 Score = 156 (60.0 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 25/73 (34%), Positives = 47/73 (64%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP-AKCQPKSRLLRR 63
             H FQE+ +K+ +PC++C Q++ G+++QGL+C+ CK +VH+ C E++   +C  K+    R
Sbjct:   111 HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKTCKVSVHLWCSEEISHQQCPGKTSTSFR 170

Query:    64 QKSTSEIETRVTP 76
             +  +S +     P
Sbjct:   171 RNFSSPLLVHAPP 183

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1PAU7 STAC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 155 (59.6 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 28/75 (37%), Positives = 48/75 (64%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAK-CQPK-SRLLR 62
             H FQE+ +K+ +PC++C Q++ G+++QGL+C+ CK +VH+ C E++  + C  K S   R
Sbjct:   110 HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKTCKVSVHLWCSEEISRQQCPGKASSSFR 169

Query:    63 RQKSTSEIETRVTPA 77
             R  S+  +     PA
Sbjct:   170 RNFSSPLLVHEPPPA 184

GO:0046872 "metal ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|E1BDE0 STAC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 155 (59.6 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 28/75 (37%), Positives = 48/75 (64%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP-AKCQPK-SRLLR 62
             H FQE+ +K+ +PC++C Q++ G+++QGL+C+ CK +VH+ C E++   +C  K S   R
Sbjct:   111 HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKTCKVSVHLWCSEEISHQQCPGKTSSSFR 170

Query:    63 RQKSTSEIETRVTPA 77
             R  S+  +     PA
Sbjct:   171 RNFSSPLLVHEPPPA 185

GO:0046872 "metal ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1SHF1 PRKD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query:     5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
             H F  ++Y + T C  C ++L+G  RQGL+C+ C+ N H  C  KVP  C
Sbjct:   175 HTFVIHSYTRPTVCQYCKKLLKGLFRQGLQCKDCRFNCHKRCAPKVPNNC 224

GO:2001028 "positive regulation of endothelial cell chemotaxis" evidence=IEA

GO:0060548 "negative regulation of cell death" evidence=IEA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0048193 "Golgi vesicle transport" evidence=IEA

GO:0048010 "vascular endothelial growth factor receptor signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0035924 "cellular response to vascular endothelial growth factor stimulus" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0032793 "positive regulation of CREB transcription factor activity" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0010837 "regulation of keratinocyte proliferation" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

UNIPROTKB|F1RUL3 PRKCQ "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 39/107 (36%), Positives = 53/107 (49%)

Query:     1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
             +D  H+F+ Y YK  T C+ C  +L G  RQGLKC  C  NVH  CQ KV   C    +L
Sbjct:   228 IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGINQKL 287

Query:    61 LRRQKSTSEIETRVTPAVPDEE-----GRLTLFI-TGIK--VRLPYV 99
             +    +  E  T+    + D E     G + + + + IK   RLPYV
Sbjct:   288 MAEALAMIE-STQQARCLRDSEHIFREGPVEIGLPSSIKGEARLPYV 333

GO:2000570 "positive regulation of T-helper 2 cell activation" evidence=IEA

GO:2000318 "positive regulation of T-helper 17 type immune response" evidence=IEA

GO:0090330 "regulation of platelet aggregation" evidence=IEA

GO:0070233 "negative regulation of T cell apoptotic process" evidence=IEA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IEA

GO:0045086 "positive regulation of interleukin-2 biosynthetic process" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0032753 "positive regulation of interleukin-4 production" evidence=IEA

GO:0032740 "positive regulation of interleukin-17 production" evidence=IEA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0001772 "immunological synapse" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	229
pfam00130	53	pfam00130, C1_1, Phorbol esters/diacylglycerol bin	6e-13
cd00029	50	cd00029, C1, Protein kinase C conserved region 1 (	2e-12
smart00109	50	smart00109, C1, Protein kinase C conserved region	1e-09
pfam00130	53	pfam00130, C1_1, Phorbol esters/diacylglycerol bin	9e-06
cd00029	50	cd00029, C1, Protein kinase C conserved region 1 (	1e-04
smart00109	50	smart00109, C1, Protein kinase C conserved region	0.001

>gnl|CDD|215738 pfam00130, C1_1, Phorbol esters/diacylglycerol binding domain (C1 domain)

 Score = 61.3 bits (149), Expect = 6e-13
 Identities = 23/53 (43%), Positives = 27/53 (50%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 57
          H F   T+K  T CD C + L G  +QGLKC  C  NVH  C   VP +C   
Sbjct: 1  HHFVHRTFKSPTFCDHCGEFLWGLGKQGLKCSWCGLNVHKRCHSLVPPECGCG 53

This domain is also known as the Protein kinase C conserved region 1 (C1) domain. Length = 53

>gnl|CDD|237996 cd00029, C1, Protein kinase C conserved region 1 (C1)

 Score = 59.4 bits (144), Expect = 2e-12
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+F   ++ K T CD+C + + G  +QGL+C  CK   H  C +KVP  C
Sbjct: 1  HRFVRKSFFKPTFCDVCRKSIWGLFKQGLRCSWCKVKCHKKCADKVPPSC 50

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis). Length = 50

>gnl|CDD|197519 smart00109, C1, Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

 Score = 52.1 bits (125), Expect = 1e-09
 Identities = 19/50 (38%), Positives = 27/50 (54%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+    T+ K T C +C + + G  +QGL+C  CK   H  C +KVP  C
Sbjct: 1  HKHVFRTFTKPTFCCVCRKSIWGSFKQGLRCSECKVKCHKKCADKVPKAC 50

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains. Length = 50

>gnl|CDD|215738 pfam00130, C1_1, Phorbol esters/diacylglycerol binding domain (C1 domain)

 Score = 41.7 bits (98), Expect = 9e-06
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 146 GGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177
            G  +QGLKC  C  NVH  C   VP +C   
Sbjct: 22  WGLGKQGLKCSWCGLNVHKRCHSLVPPECGCG 53

This domain is also known as the Protein kinase C conserved region 1 (C1) domain. Length = 53

>gnl|CDD|237996 cd00029, C1, Protein kinase C conserved region 1 (C1)

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 146 GGHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
            G  +QGL+C  CK   H  C +KVP  C
Sbjct: 22  WGLFKQGLRCSWCKVKCHKKCADKVPPSC 50

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis). Length = 50

>gnl|CDD|197519 smart00109, C1, Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 150 RQGLKCRLCKTNVHVDCQEKVPAKC 174
           +QGL+C  CK   H  C +KVP  C
Sbjct: 26  KQGLRCSECKVKCHKKCADKVPKAC 50

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains. Length = 50

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
KOG4236|consensus	888		99.96
KOG0696|consensus	683		99.94
KOG0694|consensus	694		99.82
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	99.47
cd00029	50	C1 Protein kinase C conserved region 1 (C1) . Cyst	99.32
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	99.29
KOG0696|consensus	683		99.26
KOG4236|consensus	888		99.24
smart00109	49	C1 Protein kinase C conserved region 1 (C1) domain	99.17
cd00029	50	C1 Protein kinase C conserved region 1 (C1) . Cyst	99.05
smart00109	49	C1 Protein kinase C conserved region 1 (C1) domain	98.88
KOG0695|consensus	593		98.76
KOG0695|consensus	593		98.76
KOG4239|consensus	348		98.73
KOG1011|consensus	1283		98.66
KOG1011|consensus	1283		98.51
KOG0694|consensus	694		98.33
KOG4239|consensus	348		98.31
KOG2996|consensus	865		98.04
KOG2996|consensus	865		97.2
KOG1169|consensus	634		97.11
KOG3564|consensus	604		97.1
KOG0193|consensus	678		96.81
KOG3564|consensus	604		96.7
KOG1453|consensus	918		96.6
PF03107	30	C1_2: C1 domain; InterPro: IPR004146 This short do	96.34
PF03107	30	C1_2: C1 domain; InterPro: IPR004146 This short do	95.61
KOG0193|consensus	678		95.45
PF07649	30	C1_3: C1-like domain; InterPro: IPR011424 This sho	95.39
KOG1169|consensus	634		95.09
PF07649	30	C1_3: C1-like domain; InterPro: IPR011424 This sho	93.77
KOG1170|consensus	1099		92.75
KOG1453|consensus	918		86.14
PF08746	43	zf-RING-like: RING-like domain; InterPro: IPR01485	83.45

>KOG4236|consensus

Probab=99.96  E-value=1.9e-30  Score=239.34  Aligned_cols=164  Identities=29%  Similarity=0.434  Sum_probs=118.0

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCcccccc----ccCCCC
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIET----RVTPAV   78 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~----~~~~~~   78 (229)
                      .+|.+.+++|+.|||||+||++||||.+||++|..|+.+.||||+.+++++|.+....   ++|.-.+..    ++....
T Consensus       144 ~PH~l~vhSY~~PtFCD~CGEmL~GLvrQGlKC~gCglNyHKRCa~kipNNCsG~r~r---r~sa~~l~~~~s~~l~~s~  220 (888)
T KOG4236|consen  144 RPHTLFVHSYKAPTFCDFCGEMLFGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKR---RLSAVSLQPSRSNRLNLSP  220 (888)
T ss_pred             ecceeeeecccCchHHHHHHHHHHHHHHccccccCCCCcHhhhhhhcCCCCCCccccc---CCCCCCCCCCCccccccCC
Confidence            4799999999999999999999999999999999999999999999999999764331   111111110    000000


Q ss_pred             C-CcCCceeeEEeccccccceeec-ccccCCCCCCCCccccccc-------c-cccceeeecccCCCcccccCCCCCCCC
Q psy13753         79 P-DEEGRLTLFITGIKVRLPYVVT-FTRVPGSVSPGPTMRAAGK-------L-SSHELKTYSRQNSPRLVVTSPGGPGGH  148 (229)
Q Consensus        79 ~-~~~~~~~~~i~~~~v~~P~~~~-~~~~p~s~s~~p~~r~~~~-------~-~~h~~~~~~~~~~pt~C~~C~~~i~g~  148 (229)
                      + +.+        ......|.... ..+-|.+...+|++|+++-       . .+|+|...+| ..||.|.+|..++.|+
T Consensus       221 ~~p~~--------p~~~~~pst~~~~~~~p~~~~~S~sgrpi~~ek~~~~rvkvPHTf~vHSY-~rpTVCq~CkkLLkGL  291 (888)
T KOG4236|consen  221 SSPLE--------PLLPARPSTELGGPREPSSAILSWSGRPIWMEKMLMSRVKVPHTFIVHSY-TRPTVCQYCKKLLKGL  291 (888)
T ss_pred             CCCCC--------ccccCCCcccccCCCCCCcccccccCCCchhhhhhhhcccCCeeEEEeec-cCchHHHHHHHHHHHH
Confidence            0 000        01112222111 1233444555666776552       2 4899876555 4699999999999999


Q ss_pred             ccCceEeeecccccchhccccCCCCCCcCh
Q psy13753        149 TRQGLKCRLCKTNVHVDCQEKVPAKCQPKS  178 (229)
Q Consensus       149 ~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~  178 (229)
                      ++||++|++|++|||++|...|+++|.+..
T Consensus       292 ~rQGlqCkDCk~NcHkrCa~~v~~dClge~  321 (888)
T KOG4236|consen  292 FRQGLQCKDCKFNCHKRCAMKVPNDCLGEV  321 (888)
T ss_pred             HhcCcccccCCcchhhhhhhhcccccccce
Confidence            999999999999999999999999998764

>KOG0696|consensus

Probab=99.94  E-value=1.7e-28  Score=221.45  Aligned_cols=125  Identities=31%  Similarity=0.554  Sum_probs=106.8

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCccccccccCCCCCCcC
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEE   82 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~~~~~~   82 (229)
                      ++|.|.+..|++||||.||.++|||+++||++|++|.|++|++|.+.|...|++......                  .+
T Consensus        44 k~HkF~aRFFKqPTfCsHCkDFiwGfgKQGfQCqvC~fvvHkrChefVtF~CPGadkg~d------------------tD  105 (683)
T KOG0696|consen   44 KSHKFIARFFKQPTFCSHCKDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPD------------------TD  105 (683)
T ss_pred             ccceeeehhccCCchhhhhhhheeccccCceeeeEEeehhhhhhcceEEEECCCCCCCCC------------------CC
Confidence            579999999999999999999999999999999999999999999999999998654110                  00


Q ss_pred             CceeeEEeccccccceeecccccCCCCCCCCcccccccccccceeeecccCCCcccccCCCCCCCCccCceEeeeccccc
Q psy13753         83 GRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNV  162 (229)
Q Consensus        83 ~~~~~~i~~~~v~~P~~~~~~~~p~s~s~~p~~r~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~  162 (229)
                                   -|                       .+.|.|..++| ..||+|||||+++.|++.||++|..|.+|+
T Consensus       106 -------------dp-----------------------r~kHkf~~~tY-ssPTFCDhCGsLLyGl~HQGmKC~~C~mNV  148 (683)
T KOG0696|consen  106 -------------DP-----------------------RSKHKFKIHTY-SSPTFCDHCGSLLYGLIHQGMKCDTCDMNV  148 (683)
T ss_pred             -------------Cc-----------------------ccccceeeeec-CCCchhhhHHHHHHHHHhcccccccccchH
Confidence                         01                       01356665555 379999999999999999999999999999


Q ss_pred             chhccccCCCCCCcChhhhh
Q psy13753        163 HVDCQEKVPAKCQPKSRLLR  182 (229)
Q Consensus       163 H~~C~~~v~~~C~~~~~~~~  182 (229)
                      |++|+..||+.|+.+....+
T Consensus       149 H~rCv~nVPslCG~DhtE~R  168 (683)
T KOG0696|consen  149 HHRCVENVPSLCGTDHTERR  168 (683)
T ss_pred             HHHHhhcCCcccCCcchhhc
Confidence            99999999999999865543

>KOG0694|consensus

Probab=99.82  E-value=1.9e-21  Score=184.03  Aligned_cols=134  Identities=25%  Similarity=0.495  Sum_probs=106.9

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCccccccccCCCCCCcC
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEE   82 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~~~~~~   82 (229)
                      .||.|..+++++|++|++|++|+|||.+|||+|++|...+||+|..++...|......        ..        .+. 
T Consensus       157 ~gH~F~aT~l~Qpt~Cs~C~kFi~gL~kqGyQCqvC~~vvHKkCh~kvv~~C~~~~~~--------n~--------e~q-  219 (694)
T KOG0694|consen  157 DGHKFGATSLRQPTFCSWCQKFIWGLRKQGYQCQVCWRVVHKKCHVKVVTLCDFLDNL--------NS--------EPQ-  219 (694)
T ss_pred             eCcEEEEeeccCcchhhhhhhheeccCCCceEEeeeeehHhhhhHHHHHHhccCcCcc--------Cc--------CCc-
Confidence            4899999999999999999999999999999999999999999999999999765431        00        000 


Q ss_pred             CceeeEEeccccccceeecccccCCCCCCCCcccccccccccceeeecccCCCcccccCCCCCCCCccCceEeeeccccc
Q psy13753         83 GRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNV  162 (229)
Q Consensus        83 ~~~~~~i~~~~v~~P~~~~~~~~p~s~s~~p~~r~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~  162 (229)
                      + .   ....++++||                          .|..+++ ..|+||+||++++|++.+||++|..|+++|
T Consensus       220 ~-~---~~~~~~~~Ph--------------------------rf~~~~~-q~ptFc~hCGs~L~r~~qqGlkCs~Cg~n~  268 (694)
T KOG0694|consen  220 G-F---LFEFTFRNPH--------------------------RFVKLNR-QRPTFCDHCGSVLYRLRQQGLKCSTCGRNV  268 (694)
T ss_pred             c-c---cccccccCCC--------------------------cchhhhc-cCccHHHhcchhhhhhcccCeeehhhhccc
Confidence            0 0   0013445553                          3333333 359999999999999999999999999999


Q ss_pred             chhccccCCCCCCcChhhhhcc
Q psy13753        163 HVDCQEKVPAKCQPKSRLLRRQ  184 (229)
Q Consensus       163 H~~C~~~v~~~C~~~~~~~~~~  184 (229)
                      |.+|..++...|+.....+.+.
T Consensus       269 H~~c~~~va~~CG~s~t~~~~~  290 (694)
T KOG0694|consen  269 HNRCVENLAPNCGGSRTFSPEI  290 (694)
T ss_pred             cHHHHHhcccCCCCchhhhhhh
Confidence            9999999999999986555443

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=99.47  E-value=5.7e-14  Score=93.41  Aligned_cols=52  Identities=37%  Similarity=0.799  Sum_probs=47.2

Q ss_pred             ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753          5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP   56 (229)
Q Consensus         5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~   56 (229)
                      |.|...+|..|++|++|+++|||+.+|||+|+.|++.+|++|...++..|..
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~~~~~C~~   52 (53)
T PF00130_consen    1 HHFVPTTFSKPTYCDVCGKFIWGLGKQGYRCSWCGLVCHKKCLSKVPPSCGC   52 (53)
T ss_dssp             -EEEEEESSSTEB-TTSSSBECSSSSCEEEETTTT-EEETTGGCTSSSBSST
T ss_pred             CeEEEccCCCCCCCcccCcccCCCCCCeEEECCCCChHhhhhhhhcCCCCCC
Confidence            8999999999999999999999999999999999999999999999998863

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>cd00029 C1 Protein kinase C conserved region 1 (C1)

Probab=99.32  E-value=1e-12  Score=85.89  Aligned_cols=50  Identities=40%  Similarity=0.922  Sum_probs=47.8

Q ss_pred             ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753          5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC   54 (229)
Q Consensus         5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C   54 (229)
                      |.|....+..|++|++|++.|||+.+|||+|++|++++|++|..+++.+|
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~~~~~~~~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T cd00029           1 HRFVRKSFFKPTFCDVCRKSIWGLFKQGLRCSWCKVKCHKKCADKVPPSC   50 (50)
T ss_pred             CccEEeeCCCCCChhhcchhhhccccceeEcCCCCCchhhhhhccCCCCC
Confidence            88999999999999999999999889999999999999999999999876

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis).

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=99.29  E-value=1.8e-12  Score=86.17  Aligned_cols=52  Identities=25%  Similarity=0.430  Sum_probs=43.2

Q ss_pred             cceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753        124 HELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP  176 (229)
Q Consensus       124 h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  176 (229)
                      |.|...++ ..|++|++|+.+|||+.+||++|.+|++.+|++|.++++..|+.
T Consensus         1 H~f~~~~~-~~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~~~~~C~~   52 (53)
T PF00130_consen    1 HHFVPTTF-SKPTYCDVCGKFIWGLGKQGYRCSWCGLVCHKKCLSKVPPSCGC   52 (53)
T ss_dssp             -EEEEEES-SSTEB-TTSSSBECSSSSCEEEETTTT-EEETTGGCTSSSBSST
T ss_pred             CeEEEccC-CCCCCCcccCcccCCCCCCeEEECCCCChHhhhhhhhcCCCCCC
Confidence            45554443 46999999999999999999999999999999999999999875

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>KOG0696|consensus

Probab=99.26  E-value=8e-13  Score=120.37  Aligned_cols=86  Identities=34%  Similarity=0.566  Sum_probs=67.5

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCccccccccCCCCCCcC
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEE   82 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~~~~~~   82 (229)
                      ..|.|..++|..|||||+||.+|+|+..||++|+.|.+++|++|...||+-|.....+         ..+++.....-++
T Consensus       109 ~kHkf~~~tYssPTFCDhCGsLLyGl~HQGmKC~~C~mNVH~rCv~nVPslCG~DhtE---------~RGrl~l~~~~~~  179 (683)
T KOG0696|consen  109 SKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHHRCVENVPSLCGTDHTE---------RRGRLYLEAHIKR  179 (683)
T ss_pred             cccceeeeecCCCchhhhHHHHHHHHHhcccccccccchHHHHHhhcCCcccCCcchh---------hcceEEEEEEecC
Confidence            4699999999999999999999999999999999999999999999999999887653         2233333333344


Q ss_pred             CceeeEEeccccccc
Q psy13753         83 GRLTLFITGIKVRLP   97 (229)
Q Consensus        83 ~~~~~~i~~~~v~~P   97 (229)
                      ..+++.|.+.+.=+|
T Consensus       180 ~~l~v~i~ea~NLiP  194 (683)
T KOG0696|consen  180 DVLTVTIKEAKNLIP  194 (683)
T ss_pred             ceEEEEehhhccccc
Confidence            556666665443333

>KOG4236|consensus

Probab=99.24  E-value=1.2e-12  Score=122.08  Aligned_cols=58  Identities=38%  Similarity=0.781  Sum_probs=54.9

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      .-+|.|..++|.+||.|.+|..+|.||++||++|.+|+|+|||+|+.+|+++|.+...
T Consensus       265 kvPHTf~vHSY~rpTVCq~CkkLLkGL~rQGlqCkDCk~NcHkrCa~~v~~dClge~~  322 (888)
T KOG4236|consen  265 KVPHTFIVHSYTRPTVCQYCKKLLKGLFRQGLQCKDCKFNCHKRCAMKVPNDCLGEVT  322 (888)
T ss_pred             cCCeeEEEeeccCchHHHHHHHHHHHHHhcCcccccCCcchhhhhhhhccccccccee
Confidence            4589999999999999999999999999999999999999999999999999987654

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

Probab=99.17  E-value=9.9e-12  Score=80.58  Aligned_cols=49  Identities=47%  Similarity=0.973  Sum_probs=46.1

Q ss_pred             ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753          5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC   54 (229)
Q Consensus         5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C   54 (229)
                      |.|....+..|++|++|++.||++. |||+|.+|++.+|++|..+++.+|
T Consensus         1 H~~~~~~~~~~~~C~~C~~~i~~~~-~~~~C~~C~~~~H~~C~~~v~~~C   49 (49)
T smart00109        1 HHFVERTFKKPTKCCVCRKSIWGSF-QGLRCSWCKVKCHKKCAEKVPQPC   49 (49)
T ss_pred             CceEEeccCCCCCccccccccCcCC-CCcCCCCCCchHHHHHHhhcCCCC
Confidence            7899999999999999999999876 899999999999999999998876

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.

>cd00029 C1 Protein kinase C conserved region 1 (C1)

Probab=99.05  E-value=9e-11  Score=76.55  Aligned_cols=41  Identities=34%  Similarity=0.737  Sum_probs=38.8

Q ss_pred             CCcccccCCCCCCCCccCceEeeecccccchhccccCCCCC
Q psy13753        134 SPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKC  174 (229)
Q Consensus       134 ~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C  174 (229)
                      .+++|++|.+.|||+..||++|.+|++.+|++|.++|+.+|
T Consensus        10 ~~~~C~~C~~~i~~~~~~~~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T cd00029          10 KPTFCDVCRKSIWGLFKQGLRCSWCKVKCHKKCADKVPPSC   50 (50)
T ss_pred             CCCChhhcchhhhccccceeEcCCCCCchhhhhhccCCCCC
Confidence            48899999999999889999999999999999999999877

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis).

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

Probab=98.88  E-value=8.1e-10  Score=71.46  Aligned_cols=40  Identities=38%  Similarity=0.735  Sum_probs=37.3

Q ss_pred             CCcccccCCCCCCCCccCceEeeecccccchhccccCCCCC
Q psy13753        134 SPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKC  174 (229)
Q Consensus       134 ~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C  174 (229)
                      .+++|++|.+.||++. ||++|.+|++.+|++|...|+.+|
T Consensus        10 ~~~~C~~C~~~i~~~~-~~~~C~~C~~~~H~~C~~~v~~~C   49 (49)
T smart00109       10 KPTKCCVCRKSIWGSF-QGLRCSWCKVKCHKKCAEKVPQPC   49 (49)
T ss_pred             CCCCccccccccCcCC-CCcCCCCCCchHHHHHHhhcCCCC
Confidence            5889999999999976 899999999999999999999876

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.

>KOG0695|consensus

Probab=98.76  E-value=2e-09  Score=96.41  Aligned_cols=63  Identities=25%  Similarity=0.360  Sum_probs=54.0

Q ss_pred             ccccccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753        115 MRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS  178 (229)
Q Consensus       115 ~r~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~  178 (229)
                      +|++...++|.|+.-.+ +....|..|.+.|||+.+|||+|.+|++.+|++|..+|+..|+...
T Consensus       122 wrkly~~ngh~fqakr~-nrr~~c~ic~d~iwglgrqgyrcinckl~vhkkch~~v~~~cg~~~  184 (593)
T KOG0695|consen  122 WRKLYRANGHLFQAKRF-NRRAYCGICSDRIWGLGRQGYRCINCKLLVHKKCHGLVPLTCGKHM  184 (593)
T ss_pred             HHHHHhhcCcchhhhhh-ccceeeeechhhhhhcccccceeecceeehhhhhcccccchhhhhc
Confidence            45677789999974222 3468999999999999999999999999999999999999998754

>KOG0695|consensus

Probab=98.76  E-value=1.4e-09  Score=97.32  Aligned_cols=57  Identities=35%  Similarity=0.698  Sum_probs=54.0

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccch
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS   58 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~   58 (229)
                      .+||.|+++.|.+..+|..|.+.|||+++|||+|-+|+.-+||+|...|+..|....
T Consensus       128 ~ngh~fqakr~nrr~~c~ic~d~iwglgrqgyrcinckl~vhkkch~~v~~~cg~~~  184 (593)
T KOG0695|consen  128 ANGHLFQAKRFNRRAYCGICSDRIWGLGRQGYRCINCKLLVHKKCHGLVPLTCGKHM  184 (593)
T ss_pred             hcCcchhhhhhccceeeeechhhhhhcccccceeecceeehhhhhcccccchhhhhc
Confidence            479999999999999999999999999999999999999999999999999997643

>KOG4239|consensus

Probab=98.73  E-value=1.5e-09  Score=95.08  Aligned_cols=99  Identities=25%  Similarity=0.324  Sum_probs=71.8

Q ss_pred             cccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh-------------------
Q psy13753        120 KLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL-------------------  180 (229)
Q Consensus       120 ~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~-------------------  180 (229)
                      .+++|+|..-.. .-|+||+.|+.++||+.++|++|..|++.||.+|+.++-.+|.....+                   
T Consensus        48 ~~r~~~~~~~g~-~~~~~~~~c~~~~~~vl~egL~c~~c~~tch~rcr~lv~ldc~~p~~sS~~w~s~v~~~~~~~~p~e  126 (348)
T KOG4239|consen   48 PLRGHNFYTAGL-LLPTWCDKCGDFIWGVLREGLLCIHCKFTCHIRCRMLVDLDCRSPPSSSTSWDSIVERYVNVDTPVE  126 (348)
T ss_pred             eccccccccccc-cccccchhhhHHHHHHHHHHHhhhhcCCccCHHHHhhhhhhhcCCCCCccCCCCccccccccCCCcc
Confidence            346677653222 358999999999999999999999999999999999999998654311                   


Q ss_pred             -hhccCCchhhhhccCCCCCCCCC------CCceeeeEEEeeecce
Q psy13753        181 -LRRQKSTSEIETRVTPAAPDEEG------RPLFITGIIKVRLPYV  219 (229)
Q Consensus       181 -~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~v~~~~~  219 (229)
                       ..+....++|+++++.++.+...      ....++|+|.|+|+++
T Consensus       127 ~t~p~~~~~ei~~ki~syn~~~s~~s~~L~edg~~tg~i~v~~~l~  172 (348)
T KOG4239|consen  127 WTDPEPQEMEIEQKIHSYNSESSTLSMGLHEDGEYTGFIKVTLKLV  172 (348)
T ss_pred             ccCCCchhhhhhcCcchhhchhcccccccCcccccCCceEEEeecc
Confidence             11122245677777777643333      2246999999999875

>KOG1011|consensus

Probab=98.66  E-value=4.8e-10  Score=106.33  Aligned_cols=57  Identities=30%  Similarity=0.606  Sum_probs=51.7

Q ss_pred             ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753        121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS  178 (229)
Q Consensus       121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~  178 (229)
                      -.+|+|...++ ..||+|.-|.+++||+.+||++|..|+..||.+|++++..+|...+
T Consensus       170 ttphnf~~~t~-~tpt~cyecegllwglarqglrctqc~vk~hdkc~ell~adclqra  226 (1283)
T KOG1011|consen  170 TTPHNFATTTF-QTPTFCYECEGLLWGLARQGLRCTQCQVKVHDKCRELLSADCLQRA  226 (1283)
T ss_pred             CCCCceeeeec-cCCchhhhhhhHHHHHhhcccchhhccccHHHHHHHHhhhHHHHHH
Confidence            36899987776 3699999999999999999999999999999999999999997653

>KOG1011|consensus

Probab=98.51  E-value=1.2e-08  Score=96.98  Aligned_cols=56  Identities=38%  Similarity=0.775  Sum_probs=53.2

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccch
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS   58 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~   58 (229)
                      .+|+|...+|..||||.-|.++|||+.+||++|..|++.||.+|.+.+..+|...+
T Consensus       171 tphnf~~~t~~tpt~cyecegllwglarqglrctqc~vk~hdkc~ell~adclqra  226 (1283)
T KOG1011|consen  171 TPHNFATTTFQTPTFCYECEGLLWGLARQGLRCTQCQVKVHDKCRELLSADCLQRA  226 (1283)
T ss_pred             CCCceeeeeccCCchhhhhhhHHHHHhhcccchhhccccHHHHHHHHhhhHHHHHH
Confidence            58999999999999999999999999999999999999999999999999997544

>KOG0694|consensus

Probab=98.33  E-value=1.3e-07  Score=90.72  Aligned_cols=60  Identities=33%  Similarity=0.673  Sum_probs=56.1

Q ss_pred             CCCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhh
Q psy13753          1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL   60 (229)
Q Consensus         1 ~~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~   60 (229)
                      ++++|.|..+.+..|+||++|+.++||..+||++|..|+.++|.+|..++..+|+.+...
T Consensus       227 ~~~Phrf~~~~~q~ptFc~hCGs~L~r~~qqGlkCs~Cg~n~H~~c~~~va~~CG~s~t~  286 (694)
T KOG0694|consen  227 FRNPHRFVKLNRQRPTFCDHCGSVLYRLRQQGLKCSTCGRNVHNRCVENLAPNCGGSRTF  286 (694)
T ss_pred             ccCCCcchhhhccCccHHHhcchhhhhhcccCeeehhhhccccHHHHHhcccCCCCchhh
Confidence            356799999999999999999999999999999999999999999999999999987654

>KOG4239|consensus

Probab=98.31  E-value=5.1e-08  Score=85.55  Aligned_cols=56  Identities=30%  Similarity=0.590  Sum_probs=52.0

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccch
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS   58 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~   58 (229)
                      ++|.|.......|+||+-|++++||+.++||+|..|+|+||-+|...+..+|....
T Consensus        50 r~~~~~~~g~~~~~~~~~c~~~~~~vl~egL~c~~c~~tch~rcr~lv~ldc~~p~  105 (348)
T KOG4239|consen   50 RGHNFYTAGLLLPTWCDKCGDFIWGVLREGLLCIHCKFTCHIRCRMLVDLDCRSPP  105 (348)
T ss_pred             cccccccccccccccchhhhHHHHHHHHHHHhhhhcCCccCHHHHhhhhhhhcCCC
Confidence            68899988889999999999999999999999999999999999999999996543

>KOG2996|consensus

Probab=98.04  E-value=1.4e-06  Score=82.33  Aligned_cols=54  Identities=39%  Similarity=0.866  Sum_probs=51.0

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP   56 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~   56 (229)
                      +++|.|+.++|..+|-|.+|..+|.|...|||+|..|+...|+.|..+++ +|..
T Consensus       521 an~H~fqmhtF~~~tsCkvC~mllrGtfYQGY~C~~c~~~ahkecl~~vp-~cgr  574 (865)
T KOG2996|consen  521 ANNHDFQMHTFKNTTSCKVCQMLLRGTFYQGYKCEKCGADAHKECLGRVP-PCGR  574 (865)
T ss_pred             ccCcceEEEeccCCcchHHHHHHhhhhhhcceeeeeccccHHHHhccCCC-Cccc
Confidence            57899999999999999999999999999999999999999999999998 7753

>KOG2996|consensus

Probab=97.20  E-value=0.0001  Score=70.02  Aligned_cols=57  Identities=21%  Similarity=0.425  Sum_probs=49.8

Q ss_pred             cccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753        118 AGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP  176 (229)
Q Consensus       118 ~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  176 (229)
                      ..+.+.|.|.++++ ..+|.|..|..++.|...|||+|..|+...|+.|...|| +|+.
T Consensus       518 ya~an~H~fqmhtF-~~~tsCkvC~mllrGtfYQGY~C~~c~~~ahkecl~~vp-~cgr  574 (865)
T KOG2996|consen  518 YARANNHDFQMHTF-KNTTSCKVCQMLLRGTFYQGYKCEKCGADAHKECLGRVP-PCGR  574 (865)
T ss_pred             cccccCcceEEEec-cCCcchHHHHHHhhhhhhcceeeeeccccHHHHhccCCC-Cccc
Confidence            34567899988887 568999999999999999999999999999999999987 5743

>KOG1169|consensus

Probab=97.11  E-value=0.0002  Score=68.94  Aligned_cols=56  Identities=30%  Similarity=0.584  Sum_probs=46.8

Q ss_pred             CCCceeEEEeeCCcccCccCcccc--ccc-ccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVL--RGH-TRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l--~Gl-~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      +..|.+.+..+..|++|..|.+..  -|+ ..||+.|..|++.+|.+|...+...|...
T Consensus        96 ~~~~~~~~~~~~~~~~c~~c~~~c~~~~~~~~~g~~C~~C~~~vh~~C~~~~~~~~~~~  154 (634)
T KOG1169|consen   96 DGDHVWRPKHLWKPAYCFVCPKSCGSCGVGIKQGLCCDWCGRTVHERCVRRADPECQCK  154 (634)
T ss_pred             cCceeccCCCCCCCceEEeccccccchhhcccCceeeccccchHHHHHHhhcCcccccc
Confidence            356888888999999999999987  333 48999999999999999999988776543

>KOG3564|consensus

Probab=97.10  E-value=6.6e-05  Score=69.72  Aligned_cols=91  Identities=22%  Similarity=0.345  Sum_probs=62.2

Q ss_pred             ccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh---hh--hhc---cCC---chhhh
Q psy13753        123 SHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS---RL--LRR---QKS---TSEIE  191 (229)
Q Consensus       123 ~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~---~~--~~~---~~~---~~~~~  191 (229)
                      .|.|..-++ ..+-.|++|+..|. +..-+++|++|-..||..|.++++.+|-+..   +.  ...   .+-   ..-|.
T Consensus       286 ~htfi~kt~-~~~~~Cv~C~krIk-fg~~sLkCRdC~v~~H~~Cr~~l~lpCIP~l~g~~~k~geg~L~DF~~s~aPMIP  363 (604)
T KOG3564|consen  286 LHTFISKTV-IKPENCVPCGKRIK-FGKLSLKCRDCPVVCHIECRDKLTLPCIPTLIGPPVKTGEGMLADFAPSTAPMIP  363 (604)
T ss_pred             cchhhHhhc-cCcccchhhhhhhh-hhhcccccccCCeeechhHHhcCCCCCcCccCCCCCccCceehhhhcccccccch
Confidence            455543222 46889999999886 4567899999999999999999999998731   11  000   000   11133


Q ss_pred             hccCCCCCCCCCCCceeeeEEEee
Q psy13753        192 TRVTPAAPDEEGRPLFITGIIKVR  215 (229)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~g~~~v~  215 (229)
                      ..+-..+-+.|..++.++|+|||.
T Consensus       364 alVVHCVneIEaRGLteeGLYRvs  387 (604)
T KOG3564|consen  364 ALVVHCVNEIEARGLTEEGLYRVS  387 (604)
T ss_pred             HHHHHHHHHHHHccccccceeecc
Confidence            333344557788899999999985

>KOG0193|consensus

Probab=96.81  E-value=0.00062  Score=65.30  Aligned_cols=52  Identities=29%  Similarity=0.711  Sum_probs=44.4

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      ..|.|.-++|-...||+.|+.-+|   -+|++|+.|+|.+|.+|..+|+..|...
T Consensus       177 ~~H~~~rktf~~~~fC~~~~~~~l---~~gfrC~~C~~KfHq~Cs~~vp~~C~~~  228 (678)
T KOG0193|consen  177 TTHNFVRKTFFPLAFCDSCCNKFL---FTGFRCQTCGYKFHQSCSPRVPTSCVNP  228 (678)
T ss_pred             cceeeeeccccchhhhhhhcchhh---hcccccCCCCCccccccCCCCCCCCCCc
Confidence            468899999999999996655333   4899999999999999999999999843

>KOG3564|consensus

Probab=96.70  E-value=0.00039  Score=64.74  Aligned_cols=55  Identities=29%  Similarity=0.620  Sum_probs=50.3

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      +..|.|....|.++-.|..|+..|. +..-+++|.+|-..||..|..+++.+|.+.
T Consensus       284 mr~htfi~kt~~~~~~Cv~C~krIk-fg~~sLkCRdC~v~~H~~Cr~~l~lpCIP~  338 (604)
T KOG3564|consen  284 MRLHTFISKTVIKPENCVPCGKRIK-FGKLSLKCRDCPVVCHIECRDKLTLPCIPT  338 (604)
T ss_pred             cccchhhHhhccCcccchhhhhhhh-hhhcccccccCCeeechhHHhcCCCCCcCc
Confidence            4579999999999999999999994 567799999999999999999999999874

>KOG1453|consensus

Probab=96.60  E-value=0.00046  Score=70.14  Aligned_cols=205  Identities=22%  Similarity=0.287  Sum_probs=107.6

Q ss_pred             ceeEEE-eeCCc-ccCccCccccccc-ccCeeeeCCCC----CcccccccccccCCCccchhhhhccCCccccccccCCC
Q psy13753          5 HQFQEY-TYKKI-TPCDICSQVLRGH-TRQGLKCRLCK----TNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPA   77 (229)
Q Consensus         5 H~f~~~-~~~~p-t~C~~C~~~l~Gl-~~qgl~C~~C~----~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~   77 (229)
                      |.+... .+..| .||..|..++||. .-++.+|..|+    .+.|..|...+...|......+...... .+...+...
T Consensus       392 ~~~r~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kr~~~~~~~-~~~~~~~~~  470 (918)
T KOG1453|consen  392 HMFRAGNTVRGPRSWCESCATFLPGQRILQSVKEPLCGRVSLENSNSACSDLVPNVFKQLLKRLKRNLVK-ILGTDLTTL  470 (918)
T ss_pred             HHhhcccccCcchhcccchhhhchhhhhhhcccccccccccccccccchhcccchhhHHHHHHhhhhhhh-ccccCcccc
Confidence            334443 44456 9999999999998 88889999999    7999999999999997765543321100 000000000


Q ss_pred             ------CC-------C---------cCCceeeEE-eccccccceee----cccccCCCCCCCCccccccccccc--ceee
Q psy13753         78 ------VP-------D---------EEGRLTLFI-TGIKVRLPYVV----TFTRVPGSVSPGPTMRAAGKLSSH--ELKT  128 (229)
Q Consensus        78 ------~~-------~---------~~~~~~~~i-~~~~v~~P~~~----~~~~~p~s~s~~p~~r~~~~~~~h--~~~~  128 (229)
                            ..       .         ..+....+. .+++..+-...    ..+....+.++...  ....+..|  .+..
T Consensus       471 ~~~~~~~~~~~~~vs~~~~~e~~~~g~~s~~l~r~~~~~~~~~~~~~~~d~~~~~k~~~~~~~~--~~~~~~~~sg~~~~  548 (918)
T KOG1453|consen  471 SVNKDLNSNRPLSVSRSLERESRSPGALSRGLFRVSGFSSTIESKKNAFDRKGQSKKDASPNVH--KSKEVNLHSGALKH  548 (918)
T ss_pred             ccchhhhcccCcccccchhcccCCCCcccccccccCCccccccchhhccCccccchhccCCCcc--ccccchhccCcchh
Confidence                  00       0         000000000 00000000000    00000000000000  00001111  1222


Q ss_pred             ecc-cCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhhhhccCCchhhhh----------ccCCC
Q psy13753        129 YSR-QNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIET----------RVTPA  197 (229)
Q Consensus       129 ~~~-~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~~~~~~~~~~~~~----------~~~~~  197 (229)
                      +.+ ...|+.|..|..++|.   ++..|..|.+.||++|...+...|+.........|+.+....          .+...
T Consensus       549 ~~r~~~~P~~c~~c~~~~~~---~~~~c~~c~~~chkkc~~~~~~~~~~~~l~~~~~fG~~l~~~~~~e~~~vP~i~~~c  625 (918)
T KOG1453|consen  549 YLRSLRKPAPCRTCETYSWF---MELECELCRLVCHKKCLEALKSLCGHERLPGRPLFGVSLSELARYEPSTVPFILKKC  625 (918)
T ss_pred             hhhcccCCcccccccccchh---hhcccceeeeeccccchhhccccCccccccccccccHHHHHhhccCCCCCCHHHHHH
Confidence            222 1248999999999996   459999999999999999999999875332112344333222          12222


Q ss_pred             CCCCCCCCceeeeEEEee
Q psy13753        198 APDEEGRPLFITGIIKVR  215 (229)
Q Consensus       198 ~~~~~~~~~~~~g~~~v~  215 (229)
                      ....+.....++||||+.
T Consensus       626 ~~~ie~~~lr~eGiYRks  643 (918)
T KOG1453|consen  626 LREIEAHLLRVEGIYRKS  643 (918)
T ss_pred             HHHHHHhhhhccceeecc
Confidence            334445668899999986

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines

Probab=96.34  E-value=0.0033  Score=36.70  Aligned_cols=29  Identities=31%  Similarity=0.754  Sum_probs=25.7

Q ss_pred             cCccCcccccccccCeeeeCCCCCccccccc
Q psy13753         17 PCDICSQVLRGHTRQGLKCRLCKTNVHVDCQ   47 (229)
Q Consensus        17 ~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~   47 (229)
                      +|+.|++.+-|..  +|.|..|.+.+|.+|+
T Consensus         2 ~C~~C~~~~~~~~--~Y~C~~c~f~lh~~Ca   30 (30)
T PF03107_consen    2 WCDVCRRKIDGFY--FYHCSECCFTLHVRCA   30 (30)
T ss_pred             CCCCCCCCcCCCE--eEEeCCCCCeEcCccC
Confidence            6999999887744  9999999999999985

The pattern of conservation is similar to that found in DAG_PE-bind (IPR002219 from INTERPRO), therefore we have termed this domain DC1 for divergent C1 domain. This domain probably also binds to two zinc ions. The function of proteins with this domain is uncertain, however this domain may bind to molecules such as diacylglycerol. This family are found in plant proteins.

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines

Probab=95.61  E-value=0.0079  Score=35.07  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=25.6

Q ss_pred             ccccCCCCCCCCccCceEeeecccccchhcc
Q psy13753        137 LVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQ  167 (229)
Q Consensus       137 ~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~  167 (229)
                      +|+.|+..+-|..  +|.|..|.+.+|.+|+
T Consensus         2 ~C~~C~~~~~~~~--~Y~C~~c~f~lh~~Ca   30 (30)
T PF03107_consen    2 WCDVCRRKIDGFY--FYHCSECCFTLHVRCA   30 (30)
T ss_pred             CCCCCCCCcCCCE--eEEeCCCCCeEcCccC
Confidence            5899998888755  9999999999999985

The pattern of conservation is similar to that found in DAG_PE-bind (IPR002219 from INTERPRO), therefore we have termed this domain DC1 for divergent C1 domain. This domain probably also binds to two zinc ions. The function of proteins with this domain is uncertain, however this domain may bind to molecules such as diacylglycerol. This family are found in plant proteins.

>KOG0193|consensus

Probab=95.45  E-value=0.013  Score=56.55  Aligned_cols=40  Identities=20%  Similarity=0.516  Sum_probs=33.6

Q ss_pred             CCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753        134 SPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP  176 (229)
Q Consensus       134 ~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  176 (229)
                      ...+|+.|+.   ++..+|++|..|++.+|..|...||..|+.
T Consensus       188 ~~~fC~~~~~---~~l~~gfrC~~C~~KfHq~Cs~~vp~~C~~  227 (678)
T KOG0193|consen  188 PLAFCDSCCN---KFLFTGFRCQTCGYKFHQSCSPRVPTSCVN  227 (678)
T ss_pred             chhhhhhhcc---hhhhcccccCCCCCccccccCCCCCCCCCC
Confidence            3578986554   444689999999999999999999999984

>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines

Probab=95.39  E-value=0.0058  Score=35.56  Aligned_cols=29  Identities=28%  Similarity=0.797  Sum_probs=13.2

Q ss_pred             cCccCcccccccccCeeeeCCCCCccccccc
Q psy13753         17 PCDICSQVLRGHTRQGLKCRLCKTNVHVDCQ   47 (229)
Q Consensus        17 ~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~   47 (229)
                      .|+.|+..+.+  ...|.|..|+|..|..|+
T Consensus         2 ~C~~C~~~~~~--~~~Y~C~~Cdf~lH~~Ca   30 (30)
T PF07649_consen    2 RCDACGKPIDG--GWFYRCSECDFDLHEECA   30 (30)
T ss_dssp             --TTTS----S----EEE-TTT-----HHHH
T ss_pred             cCCcCCCcCCC--CceEECccCCCccChhcC
Confidence            58999998865  468999999999999884

The pattern of conservation is similar to that found in IPR002219 from INTERPRO. C1 domains are protein kinase C-like zinc finger structures. Diacylglycerol (DAG) kinases (DGKs) have a two or three commonly conserved cysteine-rich C1 domains []. DGKs modulate the balance between the two signaling lipids, DAG and phosphatidic acid (PA), by phosphorylating DAG to yield PA []. The PKD (protein kinase D) family are novel DAG receptors. They have twin C1 domains, designated C1a and C1b, which bind DAG or phorbol esters. Individual C1 domains differ in ligand-binding activity and selectivity []. ; GO: 0047134 protein-disulfide reductase activity, 0055114 oxidation-reduction process; PDB: 1V5N_A.

>KOG1169|consensus

Probab=95.09  E-value=0.014  Score=56.49  Aligned_cols=117  Identities=23%  Similarity=0.436  Sum_probs=68.7

Q ss_pred             ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCccccccccCCCCCCcCCc
Q psy13753          5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEEGR   84 (229)
Q Consensus         5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~   84 (229)
                      |.+.+-......+|.+|   +|-..-....|+.|+...|..|......+|...........       +     ..+++.
T Consensus        34 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~~~~-------~-----~k~~~~   98 (634)
T KOG1169|consen   34 HSSEPDCIIRQMVCCVC---LWSEMAPSVDCDVDGGVSHEECVSGAASDCPLLVLLGFENQ-------R-----HKTDGD   98 (634)
T ss_pred             cccCCchhHhhhhhhhh---hhcccccccceeccccchhhhhhcccccchHHHHHHHhhhh-------h-----hhccCc
Confidence            33333333333456555   55555678999999999999999999888876443111000       0     000000


Q ss_pred             eeeEEeccccccceeecccccCCCCCCCCcccccccccccceeeecccCCCcccccCCCCC--CC-CccCceEeeecccc
Q psy13753         85 LTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGP--GG-HTRQGLKCRLCKTN  161 (229)
Q Consensus        85 ~~~~i~~~~v~~P~~~~~~~~p~s~s~~p~~r~~~~~~~h~~~~~~~~~~pt~C~~C~~~i--~g-~~~qg~~C~~C~~~  161 (229)
                              .         .+.+.                | +      .+|++|..|.+..  -| ...||+.|.+|++.
T Consensus        99 --------~---------~~~~~----------------~-~------~~~~~c~~c~~~c~~~~~~~~~g~~C~~C~~~  138 (634)
T KOG1169|consen   99 --------H---------VWRPK----------------H-L------WKPAYCFVCPKSCGSCGVGIKQGLCCDWCGRT  138 (634)
T ss_pred             --------e---------eccCC----------------C-C------CCCceEEeccccccchhhcccCceeeccccch
Confidence                    0         01111                0 0      1344555554442  22 25799999999999


Q ss_pred             cchhccccCCCCCCc
Q psy13753        162 VHVDCQEKVPAKCQP  176 (229)
Q Consensus       162 ~H~~C~~~v~~~C~~  176 (229)
                      +|..|...+...|..
T Consensus       139 vh~~C~~~~~~~~~~  153 (634)
T KOG1169|consen  139 VHERCVRRADPECQC  153 (634)
T ss_pred             HHHHHHhhcCccccc
Confidence            999999998887543

>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines

Probab=93.77  E-value=0.022  Score=33.03  Aligned_cols=29  Identities=17%  Similarity=0.342  Sum_probs=12.9

Q ss_pred             ccccCCCCCCCCccCceEeeecccccchhcc
Q psy13753        137 LVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQ  167 (229)
Q Consensus       137 ~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~  167 (229)
                      .|+.|+.-+.+  ...|.|..|++..|.+|+
T Consensus         2 ~C~~C~~~~~~--~~~Y~C~~Cdf~lH~~Ca   30 (30)
T PF07649_consen    2 RCDACGKPIDG--GWFYRCSECDFDLHEECA   30 (30)
T ss_dssp             --TTTS----S----EEE-TTT-----HHHH
T ss_pred             cCCcCCCcCCC--CceEECccCCCccChhcC
Confidence            47888877665  468999999999999985

The pattern of conservation is similar to that found in IPR002219 from INTERPRO. C1 domains are protein kinase C-like zinc finger structures. Diacylglycerol (DAG) kinases (DGKs) have a two or three commonly conserved cysteine-rich C1 domains []. DGKs modulate the balance between the two signaling lipids, DAG and phosphatidic acid (PA), by phosphorylating DAG to yield PA []. The PKD (protein kinase D) family are novel DAG receptors. They have twin C1 domains, designated C1a and C1b, which bind DAG or phorbol esters. Individual C1 domains differ in ligand-binding activity and selectivity []. ; GO: 0047134 protein-disulfide reductase activity, 0055114 oxidation-reduction process; PDB: 1V5N_A.

>KOG1170|consensus

Probab=92.75  E-value=0.055  Score=53.68  Aligned_cols=57  Identities=18%  Similarity=0.225  Sum_probs=45.7

Q ss_pred             ccceeecccccCCCCCCCCcccccccccccceeeecccCCCcccc-cCCCCCCCCccCceEeeecccccchhccccCCCC
Q psy13753         95 RLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVV-TSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAK  173 (229)
Q Consensus        95 ~~P~~~~~~~~p~s~s~~p~~r~~~~~~~h~~~~~~~~~~pt~C~-~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~  173 (229)
                      +|||+|.++++|++.                        .-+.|+ .|++.+.   .|.++|-||+-.+|..|...+...
T Consensus       105 ~mphqw~Egnlpvss------------------------kc~vc~k~cgs~~r---lqd~rclwc~~~vh~~c~~~~~~~  157 (1099)
T KOG1170|consen  105 IMPHQWMEGNLPVSS------------------------KCSVCEKPCGSVLR---LQDYRCLWCGCCVHDTCIGNLARA  157 (1099)
T ss_pred             cCchhhhhcCCCccc------------------------cccccccccccccc---cCCcceEeeccEeehhhhhhHHhh
Confidence            899999999999762                        123343 3777755   799999999999999999999988


Q ss_pred             CCcCh
Q psy13753        174 CQPKS  178 (229)
Q Consensus       174 C~~~~  178 (229)
                      |..+.
T Consensus       158 cs~~~  162 (1099)
T KOG1170|consen  158 CSLGH  162 (1099)
T ss_pred             ccccc
Confidence            87764

>KOG1453|consensus

Probab=86.14  E-value=0.2  Score=51.24  Aligned_cols=43  Identities=28%  Similarity=0.600  Sum_probs=37.8

Q ss_pred             CcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753         14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus        14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      .|+.|..|...+|.   +++.|..|...||++|...+...|.....
T Consensus       555 ~P~~c~~c~~~~~~---~~~~c~~c~~~chkkc~~~~~~~~~~~~l  597 (918)
T KOG1453|consen  555 KPAPCRTCETYSWF---MELECELCRLVCHKKCLEALKSLCGHERL  597 (918)
T ss_pred             CCcccccccccchh---hhcccceeeeeccccchhhccccCccccc
Confidence            49999999999996   44999999999999999999999975543

>PF08746 zf-RING-like: RING-like domain; InterPro: IPR014857 This is a zinc finger domain that is related to the C3HC4 RING finger domain (IPR001841 from INTERPRO)

Probab=83.45  E-value=0.32  Score=30.69  Aligned_cols=29  Identities=34%  Similarity=0.959  Sum_probs=16.7

Q ss_pred             CccCcccccccccCeeeeC--CCCCcccccccccc
Q psy13753         18 CDICSQVLRGHTRQGLKCR--LCKTNVHVDCQEKV   50 (229)
Q Consensus        18 C~~C~~~l~Gl~~qgl~C~--~C~~~~Hk~C~~~v   50 (229)
                      |..|.+++-    ||.+|.  +|+...|..|...-
T Consensus         1 C~~C~~iv~----~G~~C~~~~C~~r~H~~C~~~y   31 (43)
T PF08746_consen    1 CEACKEIVT----QGQRCSNRDCNVRLHDDCFKKY   31 (43)
T ss_dssp             -TTT-SB-S----SSEE-SS--S--EE-HHHHHHH
T ss_pred             CcccchhHe----eeccCCCCccCchHHHHHHHHH
Confidence            677888654    899999  69999999997644

; PDB: 3NW0_A 2CT0_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	229
2enz_A	65	Solution Structure Of The Second C1 Domain From Hum		2e-08
3uej_A	65	Structural And Functional Characterization Of An An		3e-08
4fkd_A	65	Identification Of The Activator Binding Residues In		4e-08
3uey_A	65	Structural And Functional Characterization Of An An		7e-08
3ugd_A	65	Structural And Functional Characterization Of An An		1e-07
1ptq_A	50	Protein Kinase C Delta Cys2 Domain Length = 50		1e-07
3uff_A	65	Structural And Functional Characterization Of An An		4e-07
1xa6_A	466	Crystal Structure Of The Human Beta2-Chimaerin Leng		1e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-06
2db6_A	74	Solution Structure Of Rsgi Ruh-051, A C1 Domain Of		2e-06
3cxl_A	463	Crystal Structure Of Human Chimerin 1 (Chn1) Length		3e-06
2eli_A	85	Solution Structure Of The Second Phorbol EstersDIAC		4e-06
1tbn_A	82	Nmr Structure Of A Protein Kinase C-G Phorbol-Bindi		6e-06
3ky9_A	587	Autoinhibited Vav1 Length = 587		2e-05
3bji_A	378	Structural Basis Of Promiscuous Guanine Nucleotide		2e-05
2vrw_B	406	Critical Structural Role For The Ph And C1 Domains		8e-05
2enn_A	77	Solution Structure Of The First C1 Domain From Huma		3e-04
2yuu_A	83	Solution Structure Of The First Phorbol EstersDIACY		4e-04
1faq_A	52	Raf-1 Cysteine Rich Domain, Nmr, 27 Structures Leng		4e-04

>pdb|2ENZ|A Chain A, Solution Structure Of The Second C1 Domain From Human Protein Kinase C Theta Length = 65

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 31/54 (57%)
Query: 1  MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          +D  H+F+ Y YK  T C+ C  +L G  RQGLKC  C  NVH  CQ KV   C
Sbjct: 9  IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLC 62

>pdb|3UEJ|A Chain A, Structural And Functional Characterization Of An Anesthetic Binding Site In The Second Cysteine-Rich Domain Of Protein Kinase Cdelta Length = 65

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          SH+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C+
Sbjct: 9  SHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCE 60

>pdb|4FKD|A Chain A, Identification Of The Activator Binding Residues In The Second Cysteine-rich Regulatory Domain Of Protein Kinase C Theta Length = 65

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 31/52 (59%)
Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          SH+F+ Y YK  T C+ C  +L G  RQGLKC  C  NVH  CQ KV   C+
Sbjct: 9  SHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCE 60

>pdb|3UEY|A Chain A, Structural And Functional Characterization Of An Anesthetic Binding Site In The Second Cysteine-Rich Domain Of Protein Kinase Cdelta Length = 65

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          SH+F+ + Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C+
Sbjct: 9  SHRFKVFNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCE 60

>pdb|3UGD|A Chain A, Structural And Functional Characterization Of An Anesthetic Binding Site In The Second Cysteine-Rich Domain Of Protein Kinase C Delta Length = 65

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          SH+F+ + Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C+
Sbjct: 9  SHRFKVHNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCE 60

>pdb|1PTQ|A Chain A, Protein Kinase C Delta Cys2 Domain Length = 50

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C
Sbjct: 1  HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50

>pdb|3UFF|A Chain A, Structural And Functional Characterization Of An Anesthetic Binding Site In The Second Cysteine-Rich Domain Of Protein Kinase Cdelta Length = 65

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          SH+F+   Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C+
Sbjct: 9  SHRFKVTNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCE 60

>pdb|1XA6|A Chain A, Crystal Structure Of The Human Beta2-Chimaerin Length = 466

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 2   DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLL 61
           + +H F+ +T++    C+ C+  + G   QG++C  C  NVH  C + VP  CQP  + +
Sbjct: 210 EKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRI 269
Query: 62  RR 63
           ++
Sbjct: 270 KK 271

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 3   TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
           + H+F+ +TY   T CD C  +L G   QG+KC  C  NVH  C   VP+ C
Sbjct: 101 SKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLC 152

>pdb|2DB6|A Chain A, Solution Structure Of Rsgi Ruh-051, A C1 Domain Of Stac3 From Human Cdna Length = 74

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 2  DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV 50
          D  H+F+++ +KK   CD+C++++  + + GL+C+ CKTN+H  CQ  V
Sbjct: 15 DKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYV 63

>pdb|3CXL|A Chain A, Crystal Structure Of Human Chimerin 1 (Chn1) Length = 463

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 5   HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQ 64
           H F+ +T++    C+ C+  + G   QG+KC  C  NVH  C + VP  C+P  + +++ 
Sbjct: 210 HNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKV 269
Query: 65  KS 66
            S
Sbjct: 270 YS 271

>pdb|2ELI|A Chain A, Solution Structure Of The Second Phorbol EstersDIACYLGLYCEROL BINDING DOMAIN OF HUMAN PROTEIN Kinase C Alpha Type Length = 85

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 3  TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          + H+F+ +TY   T CD C  +L G   QG+KC  C  NVH  C   VP+ C
Sbjct: 16 SKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLC 67

>pdb|1TBN|A Chain A, Nmr Structure Of A Protein Kinase C-G Phorbol-Binding Domain, Minimized Average Structure Length = 82

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+F+ ++Y   T CD C  +L G   QG+KC  C+ NVH  C   VP+ C
Sbjct: 11 HKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLC 60

>pdb|3KY9|A Chain A, Autoinhibited Vav1 Length = 587

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 3   TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51
             H FQ +++++ T C  C  +LRG   QG +C  C+ + H +C  +VP
Sbjct: 517 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVP 565

>pdb|3BJI|A Chain A, Structural Basis Of Promiscuous Guanine Nucleotide Exchange By The T-Cell Essential Vav1 Length = 378

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 3   TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51
             H FQ +++++ T C  C  +LRG   QG +C  C+ + H +C  +VP
Sbjct: 326 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVP 374

>pdb|2VRW|B Chain B, Critical Structural Role For The Ph And C1 Domains Of The Vav1 Exchange Factor Length = 406

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 3   TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51
             H FQ +++++ T C  C  +LRG   QG +C  C+   H +C  +VP
Sbjct: 345 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP 393

>pdb|2ENN|A Chain A, Solution Structure Of The First C1 Domain From Human Protein Kinase C Theta Length = 77

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+F    + + T C +C + + G  +QG +CR C   +H  C +KV AKC
Sbjct: 24 HEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKC 73

>pdb|2YUU|A Chain A, Solution Structure Of The First Phorbol EstersDIACYLGLYCEROL BINDING DOMAIN OF HUMAN PROTEIN Kinase C, Delta Length = 83

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          +H+F    + + T C +C   + G  +QG KCR C   +H  C +K+  +C
Sbjct: 17 NHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRC 67

>pdb|1FAQ|A Chain A, Raf-1 Cysteine Rich Domain, Nmr, 27 Structures Length = 52

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 3  TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          T+H F   T+ K+  CDIC + L      G +C+ C    H  C  KVP  C
Sbjct: 2  TTHNFARKTFLKLAFCDICQKFL----LNGFRCQTCGYKFHEHCSTKVPTMC 49

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	229
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	1e-18
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	2e-06
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	4e-18
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	1e-07
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	4e-18
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	9e-08
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	2e-17
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	2e-07
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	2e-17
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	1e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-12
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	2e-15
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	3e-06
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	4e-15
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	3e-06
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	1e-13
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	7e-06
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	3e-12
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	8e-12
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	2e-05
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	3e-11
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	1e-05
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	4e-11
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	1e-05
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	5e-08
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	1e-07
1r79_A	84	Diacylglycerol kinase, delta; C1 domain, cystein-r	2e-05

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 76.1 bits (187), Expect = 1e-18
 Identities = 19/53 (35%), Positives = 35/53 (66%)

Query: 2  DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          D  H+F+++ +KK   CD+C++++  + + GL+C+ CKTN+H  CQ  V  + 
Sbjct: 15 DKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQR 67

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
            + + GL+C+ CKTN+H  CQ  V  + 
Sbjct: 40  LNNKFGLRCKNCKTNIHEHCQSYVEMQR 67

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A* Length = 50

 Score = 74.4 bits (183), Expect = 4e-18
 Identities = 24/50 (48%), Positives = 29/50 (58%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C
Sbjct: 1  HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A* Length = 50

 Score = 46.3 bits (110), Expect = 1e-07
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
           G  +QGLKC  C  NVH  C+EKV   C
Sbjct: 23  GLVKQGLKCEDCGMNVHHKCREKVANLC 50

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus} Length = 66

 Score = 74.5 bits (183), Expect = 4e-18
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 56
          H F+ +T    T C  C  +L G  RQG++C  C    H  CQ+ + A C+ 
Sbjct: 14 HNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL 65

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus} Length = 66

 Score = 46.7 bits (111), Expect = 9e-08
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 176
           G  RQG++C  C    H  CQ+ + A C+ 
Sbjct: 36  GIARQGMRCTECGVKCHEKCQDLLNADCKL 65

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 73.4 bits (180), Expect = 2e-17
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQ 64
          H+F+ +TY   T CD C  +L G   QG+KC  C  NVH  C   VP+ C       +R 
Sbjct: 18 HKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLC-GMDHTEKRG 76

Query: 65 KSTSEIET 72
          +   + E 
Sbjct: 77 RIYLKAEV 84

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 46.0 bits (109), Expect = 2e-07
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIET 192
           G   QG+KC  C  NVH  C   VP+ C       +R +   + E 
Sbjct: 40  GLIHQGMKCDTCDMNVHKQCVINVPSLC-GMDHTEKRGRIYLKAEV 84

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 65

 Score = 72.5 bits (178), Expect = 2e-17
 Identities = 26/54 (48%), Positives = 31/54 (57%)

Query: 1  MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          +D  H+F+ Y YK  T C+ C  +L G  RQGLKC  C  NVH  CQ KV   C
Sbjct: 9  IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLC 62

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 65

 Score = 46.3 bits (110), Expect = 1e-07
 Identities = 16/28 (57%), Positives = 16/28 (57%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
           G  RQGLKC  C  NVH  CQ KV   C
Sbjct: 35  GLARQGLKCDACGMNVHHRCQTKVANLC 62

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 74.7 bits (183), Expect = 1e-15
 Identities = 39/204 (19%), Positives = 58/204 (28%), Gaps = 55/204 (26%)

Query: 4   SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 63
           +H+F    +K+ T C  C+  + G  +QG +C++C   VH  C E V   C         
Sbjct: 37  NHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSC--------- 87

Query: 64  QKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSS 123
                +      P    +           K+      TF    GS+  G           
Sbjct: 88  -PGADKGPASDDPRSKHK----------FKIHTYSSPTFCDHCGSLLYG----------- 125

Query: 124 HELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 183
                                      QG+KC  C  NVH  C   VP+ C       R 
Sbjct: 126 ------------------------LIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRG 161

Query: 184 QKSTSEIETRVTPAAPDEEGRPLF 207
           +        R        + + L 
Sbjct: 162 RIYIQAHIDREVLIVVVRDAKNLV 185

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 63.1 bits (153), Expect = 8e-12
 Identities = 28/99 (28%), Positives = 41/99 (41%)

Query: 1   MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 60
             + H+F+ +TY   T CD C  +L G   QG+KC  C  NVH  C   VP+ C      
Sbjct: 99  PRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTE 158

Query: 61  LRRQKSTSEIETRVTPAVPDEEGRLTLFITGIKVRLPYV 99
            R +        R    V   + +  + +    +  PYV
Sbjct: 159 RRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYV 197

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83

 Score = 67.9 bits (166), Expect = 2e-15
 Identities = 18/64 (28%), Positives = 29/64 (45%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQ 64
          H+F    + + T C +C   + G  +QG KCR C   +H  C +K+  +C   +   R  
Sbjct: 18 HEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAANSRDT 77

Query: 65 KSTS 68
             S
Sbjct: 78 SGPS 81

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83

 Score = 43.3 bits (102), Expect = 3e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTS 188
           G  +QG KCR C   +H  C +K+  +C   +   R     S
Sbjct: 40  GLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAANSRDTSGPS 81

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 77

 Score = 67.1 bits (164), Expect = 4e-15
 Identities = 18/54 (33%), Positives = 29/54 (53%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS 58
          H+F    + + T C +C + + G  +QG +CR C   +H  C +KV AKC   +
Sbjct: 24 HEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGSA 77

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 77

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 146 GGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS 178
            G  +QG +CR C   +H  C +KV AKC   +
Sbjct: 45  WGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGSA 77

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A Length = 52

 Score = 62.1 bits (151), Expect = 1e-13
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 3  TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          T+H F   T+ K+  CDIC + L      G +C+ C    H  C  KVP  C
Sbjct: 2  TTHNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMC 49

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A Length = 52

 Score = 41.3 bits (97), Expect = 7e-06
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 151 QGLKCRLCKTNVHVDCQEKVPAKC 174
            G +C+ C    H  C  KVP  C
Sbjct: 26  NGFRCQTCGYKFHEHCSTKVPTMC 49

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Length = 84

 Score = 59.8 bits (144), Expect = 3e-12
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTR--QGLKCRLCKTNVHVDCQEKVPAKCQP 56
          H+F    Y   T C+ C + L    +    L+CR C    H D  +K      P
Sbjct: 25 HEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAP 78

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A Length = 463

 Score = 63.0 bits (153), Expect = 8e-12
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 4   SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 63
            H F+ +T++    C+ C+  + G   QG+KC  C  NVH  C + VP  C+P  + +++
Sbjct: 209 IHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKK 268

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A Length = 463

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRR 183
           G   QG+KC  C  NVH  C + VP  C+P  + +++
Sbjct: 232 GLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKK 268

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus} Length = 72

 Score = 56.5 bits (136), Expect = 3e-11
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 5  HQFQEYTYKKI-TPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          H+F E   +     CD+C + +    RQ L+C  CK   H +C+  +   C+
Sbjct: 24 HRFVELALRGGPGWCDLCGREVL---RQALRCANCKFTCHSECRSLIQLDCR 72

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus} Length = 72

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 150 RQGLKCRLCKTNVHVDCQEKVPAKCQ 175
           RQ L+C  CK   H +C+  +   C+
Sbjct: 47  RQALRCANCKFTCHSECRSLIQLDCR 72

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus} Length = 59

 Score = 55.6 bits (134), Expect = 4e-11
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 5  HQFQEYTYKKI-TPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55
          H+F E   +     CD+C + +    RQ L+C  CK   H +C+  +   C+
Sbjct: 11 HRFVELALRGGPGWCDLCGREVL---RQALRCANCKFTCHSECRSLIQLDCR 59

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus} Length = 59

 Score = 40.6 bits (95), Expect = 1e-05
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 150 RQGLKCRLCKTNVHVDCQEKVPAKCQ 175
           RQ L+C  CK   H +C+  +   C+
Sbjct: 34  RQALRCANCKFTCHSECRSLIQLDCR 59

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406

 Score = 51.4 bits (123), Expect = 5e-08
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 2   DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51
              H FQ +++++ T C  C  +LRG   QG +C  C+   H +C  +VP
Sbjct: 344 ANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP 393

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 17/49 (34%), Positives = 28/49 (57%)

Query: 3   TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51
             H FQ +++++ T C  C  +LRG   QG +C  C+ + H +C  +VP
Sbjct: 517 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVP 565

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1 Length = 84

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 5  HQFQEYTYKKITPCDICSQVLR-GHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          HQ+ E        C +C +        Q  +C  CK  VH  C+E +  KC
Sbjct: 28 HQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKC 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	229
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.91
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	99.73
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	99.7
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	99.69
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	99.69
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	99.68
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	99.68
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	99.67
3uej_A	65	NPKC-delta, protein kinase C delta type; proteine	99.67
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	99.63
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	99.6
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	99.6
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	99.57
3uej_A	65	NPKC-delta, protein kinase C delta type; proteine	99.57
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	99.56
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	99.55
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	99.55
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	99.54
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	99.53
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	99.53
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	99.53
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	99.47
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	99.47
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	99.4
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	99.39
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	99.36
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	99.31
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	99.27
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.14
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	99.11
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	99.09
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.09
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.04
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	99.04
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	98.85
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	98.8
1r79_A	84	Diacylglycerol kinase, delta; C1 domain, cystein-r	98.37
1r79_A	84	Diacylglycerol kinase, delta; C1 domain, cystein-r	97.8
1v5n_A	89	PDI-like hypothetical protein AT1G60420; DC1 domai	93.78
1v5n_A	89	PDI-like hypothetical protein AT1G60420; DC1 domai	86.74

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.91  E-value=9.8e-26  Score=217.72  Aligned_cols=122  Identities=29%  Similarity=0.556  Sum_probs=47.3

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCccccccccCCCCCCcC
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEE   82 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~~~~~~   82 (229)
                      ++|.|.+++|.+||||++|+++|||+.+|||+|.+|+++||++|..+|+..|........                  .+
T Consensus        36 ~~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~------------------~~   97 (674)
T 3pfq_A           36 KNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPA------------------SD   97 (674)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccc------------------cc
Confidence            589999999999999999999999999999999999999999999999999987643110                  00


Q ss_pred             CceeeEEeccccccceeecccccCCCCCCCCcccccccccccceeeecccCCCcccccCCCCCCCCccCceEeeeccccc
Q psy13753         83 GRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNV  162 (229)
Q Consensus        83 ~~~~~~i~~~~v~~P~~~~~~~~p~s~s~~p~~r~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~  162 (229)
                                ...+                          .|+|...++ ..+++|++|+++|||+.+||++|.+|++++
T Consensus        98 ----------~~~~--------------------------~h~~~~~~~-~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~  140 (674)
T 3pfq_A           98 ----------DPRS--------------------------KHKFKIHTY-SSPTFCDHCGSLLYGLIHQGMKCDTCMMNV  140 (674)
T ss_dssp             ----------------------------------------CCCCCEECC-SSCCCCSSSCSCCBBSSSCEECCSSSCCCB
T ss_pred             ----------cccC--------------------------CcceeecCC-CCCCCCCccccccchhhcCccccccCCcch
Confidence                      0011                          245544343 368999999999999999999999999999


Q ss_pred             chhccccCCCCCCcChh
Q psy13753        163 HVDCQEKVPAKCQPKSR  179 (229)
Q Consensus       163 H~~C~~~v~~~C~~~~~  179 (229)
                      |++|...|+..|+.+..
T Consensus       141 H~~C~~~v~~~C~~d~~  157 (674)
T 3pfq_A          141 HKRCVMNVPSLCGTDHT  157 (674)
T ss_dssp             CSSTTSSSCCCSSSCSS
T ss_pred             hhhhhhccCcccccccc
Confidence            99999999999987643

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=2.8e-18  Score=118.27  Aligned_cols=56  Identities=46%  Similarity=0.883  Sum_probs=53.4

Q ss_pred             CCCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753          1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP   56 (229)
Q Consensus         1 ~~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~   56 (229)
                      ++.+|.|.+++|..||+|++|+++|||+.+|||+|++|++++|++|..+|+.+|..
T Consensus         9 ~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   64 (65)
T 2enz_A            9 IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGI   64 (65)
T ss_dssp             CCCCCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSCSCTTT
T ss_pred             CCCCCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHhhCcCcCCC
Confidence            46799999999999999999999999999999999999999999999999999964

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}

Probab=99.70  E-value=7.5e-18  Score=116.49  Aligned_cols=55  Identities=33%  Similarity=0.689  Sum_probs=50.4

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP   56 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~   56 (229)
                      ..+|.|.+++|..||+|++|+++|||+.+|||+|++|++++|++|..+|+.+|..
T Consensus        11 ~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   65 (66)
T 1y8f_A           11 GIQHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL   65 (66)
T ss_dssp             --CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred             CCCcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence            4689999999999999999999999999999999999999999999999999964

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*

Probab=99.69  E-value=9.7e-18  Score=109.49  Aligned_cols=50  Identities=48%  Similarity=0.941  Sum_probs=48.7

Q ss_pred             ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753          5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC   54 (229)
Q Consensus         5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C   54 (229)
                      |.|.+++|..|++|++|+++|||+.+|||+|++|++++|++|..+++.+|
T Consensus         1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T 1ptq_A            1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC   50 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred             CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcCCCC
Confidence            89999999999999999999999999999999999999999999999887

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=1.6e-17  Score=118.24  Aligned_cols=56  Identities=32%  Similarity=0.739  Sum_probs=53.2

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      ..+|.|.+++|..||+|++|+++|||+.+|||+|++|++++|++|...|+.+|...
T Consensus        21 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~   76 (77)
T 2enn_A           21 VKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGS   76 (77)
T ss_dssp             SSSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCCSCCCCC
T ss_pred             CCCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCcCCCCCC
Confidence            46899999999999999999999999999999999999999999999999999753

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=1.9e-17  Score=119.50  Aligned_cols=57  Identities=28%  Similarity=0.728  Sum_probs=54.3

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      .+|.|.+++|..|++|++|+++|||+.+|||+|.+|++++|++|...|+.+|.....
T Consensus        16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~~~   72 (83)
T 2yuu_A           16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAA   72 (83)
T ss_dssp             GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTCCSCCSSCCC
T ss_pred             CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhhhCCCcCCCccc
Confidence            589999999999999999999999999999999999999999999999999987654

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=1.3e-17  Score=117.77  Aligned_cols=56  Identities=36%  Similarity=0.819  Sum_probs=52.8

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccC-CCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPA-KCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~-~C~~~   57 (229)
                      ..+|.|+.++|..||||++|+++|||+.+|||+|++|++++|++|..+|+. +|...
T Consensus        15 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~   71 (74)
T 2db6_A           15 DKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGP   71 (74)
T ss_dssp             SSBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGSSSBCCCC
T ss_pred             CCCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhhCCCCcCCCC
Confidence            578999999999999999999999999999999999999999999999996 69764

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=4.5e-17  Score=118.07  Aligned_cols=58  Identities=38%  Similarity=0.735  Sum_probs=54.6

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      ..+|.|.+++|..|+||++|+++|||+.+|||+|.+|++++|++|...|+.+|.....
T Consensus        15 ~~~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~   72 (85)
T 2eli_A           15 RSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHT   72 (85)
T ss_dssp             TTSCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCC
T ss_pred             CCCcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchh
Confidence            3689999999999999999999999999999999999999999999999999987644

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*

Probab=99.67  E-value=1.3e-17  Score=114.90  Aligned_cols=55  Identities=45%  Similarity=0.837  Sum_probs=52.4

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      ++|.|.+++|..|++|++|+++|||+.+|||+|++|++++|++|..+|+.+|...
T Consensus         8 ~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~   62 (65)
T 3uej_A            8 GSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFI   62 (65)
T ss_dssp             EECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSEEEEE
T ss_pred             CCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCCCcCCCc
Confidence            5799999999999999999999999999999999999999999999999999753

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.63  E-value=7.6e-17  Score=116.13  Aligned_cols=56  Identities=27%  Similarity=0.544  Sum_probs=52.8

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccC--eeeeCCCCCcccccccc---cccCCCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQ--GLKCRLCKTNVHVDCQE---KVPAKCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~q--gl~C~~C~~~~Hk~C~~---~v~~~C~~~   57 (229)
                      ..||.|.+++|..||||++|+++|||+++|  ||+|.+|+++||++|..   .|+.+|..+
T Consensus        22 ~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~   82 (84)
T 2row_A           22 HKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVY   82 (84)
T ss_dssp             ETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTT
T ss_pred             cCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcC
Confidence            468999999999999999999999999998  99999999999999999   799999754

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.60  E-value=7.3e-16  Score=106.09  Aligned_cols=55  Identities=38%  Similarity=0.600  Sum_probs=49.2

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK  177 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~  177 (229)
                      .+|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|..+|+.+|+.+
T Consensus        11 ~~H~F~~~~~-~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~   65 (65)
T 2enz_A           11 MPHRFKVYNY-KSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGIN   65 (65)
T ss_dssp             CCCCEEECCC-CSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSCSCTTTC
T ss_pred             CCCccEeEcC-CCCcCchhcChhheecCCcccccCCCCCccCHhHHhhCcCcCCCC
Confidence            3677876665 469999999999999999999999999999999999999999863

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=1.2e-15  Score=110.05  Aligned_cols=63  Identities=22%  Similarity=0.430  Sum_probs=55.1

Q ss_pred             ccccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753        117 AAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL  180 (229)
Q Consensus       117 ~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~  180 (229)
                      +++...+|.|...++ ..|++|++|+++|||+.+|||+|.+|++++|++|..+|+..|......
T Consensus        11 k~~~~~~H~F~~~~~-~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~~~~   73 (83)
T 2yuu_A           11 KIHYIKNHEFIATFF-GQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAAN   73 (83)
T ss_dssp             CEECGGGCCEEEECC-SSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTCCSCCSSCCCC
T ss_pred             hCcccCCCceEeEeC-CCCcChhhcChhhccccccccccCCcCCeeChhhhhhCCCcCCCcccc
Confidence            455567899987766 479999999999999999999999999999999999999999876533

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*

Probab=99.57  E-value=1.1e-15  Score=99.67  Aligned_cols=50  Identities=40%  Similarity=0.659  Sum_probs=44.4

Q ss_pred             cceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCC
Q psy13753        124 HELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKC  174 (229)
Q Consensus       124 h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C  174 (229)
                      |+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|.+.|+..|
T Consensus         1 H~F~~~~~-~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T 1ptq_A            1 HRFKVYNY-MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC   50 (50)
T ss_dssp             CCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred             CCCEeecC-CCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcCCCC
Confidence            45555554 469999999999999999999999999999999999999887

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*

Probab=99.57  E-value=6.1e-16  Score=106.46  Aligned_cols=58  Identities=36%  Similarity=0.573  Sum_probs=51.4

Q ss_pred             ccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753        119 GKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK  177 (229)
Q Consensus       119 ~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~  177 (229)
                      +..++|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|..+|+.+|+..
T Consensus         5 ~~~~~H~F~~~~~-~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~   62 (65)
T 3uej_A            5 ASVGSHRFKVYNY-MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFI   62 (65)
T ss_dssp             EEEEECCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSEEEEE
T ss_pred             eEeCCceEEeEeC-CCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCCCcCCCc
Confidence            3445788887665 479999999999999999999999999999999999999999764

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A

Probab=99.56  E-value=2.1e-15  Score=99.15  Aligned_cols=50  Identities=38%  Similarity=0.875  Sum_probs=48.1

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP   56 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~   56 (229)
                      ++|.|..++|..|++|++|+++||    |||+|++|++++|++|..+++.+|.+
T Consensus         2 ~~H~F~~~~~~~pt~C~~C~~~l~----qG~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T 1faq_A            2 TTHNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             CCCCCEEECCSSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             CCceeEeEeCCCCcCCCCcccccc----cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence            589999999999999999999999    99999999999999999999999975

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}

Probab=99.55  E-value=1.3e-15  Score=105.23  Aligned_cols=54  Identities=26%  Similarity=0.589  Sum_probs=47.0

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP  176 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  176 (229)
                      .+|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|.++|+.+|.+
T Consensus        12 ~~H~F~~~~~-~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   65 (66)
T 1y8f_A           12 IQHNFEVWTA-TTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL   65 (66)
T ss_dssp             -CCCEEEEEC-SSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred             CCcccEeeeC-CCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence            3578876665 47999999999999999999999999999999999999999975

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=1.7e-15  Score=107.69  Aligned_cols=60  Identities=27%  Similarity=0.478  Sum_probs=53.0

Q ss_pred             ccccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753        117 AAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK  177 (229)
Q Consensus       117 ~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~  177 (229)
                      .++..++|.|...++ ..||+|++|.++|||+.+||++|.+|++++|++|.+.|+.+|...
T Consensus        17 ~~~~~~~H~F~~~~f-~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~   76 (77)
T 2enn_A           17 KVHHVKCHEFTATFF-PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGS   76 (77)
T ss_dssp             CCEESSSCEEEEECC-SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCCSCCCCC
T ss_pred             ccccCCCCccEEEcC-CCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCcCCCCCC
Confidence            345567899987665 479999999999999999999999999999999999999999763

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=3.2e-15  Score=108.22  Aligned_cols=58  Identities=31%  Similarity=0.494  Sum_probs=51.1

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL  180 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~  180 (229)
                      .+|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|..+|+..|+.+...
T Consensus        16 ~~H~F~~~~~-~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e   73 (85)
T 2eli_A           16 SKHKFKIHTY-GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE   73 (85)
T ss_dssp             TSCCCEEECC-SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred             CCcccEeeeC-CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence            3577776665 479999999999999999999999999999999999999999886544

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}

Probab=99.53  E-value=4.5e-15  Score=104.20  Aligned_cols=51  Identities=29%  Similarity=0.662  Sum_probs=48.2

Q ss_pred             CCCceeEE-EeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCc
Q psy13753          2 DTSHQFQE-YTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ   55 (229)
Q Consensus         2 ~~~H~f~~-~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~   55 (229)
                      ..+|.|.+ ++|..||||++|+++|   ++|||+|.+|+|++|++|..+|+..|.
T Consensus        21 ~~~H~F~~~~~~~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~V~~~C~   72 (72)
T 2fnf_X           21 GEGHRFVELALRGGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR   72 (72)
T ss_dssp             CSSCCCEECCCCSSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGGCCSCCC
T ss_pred             CCCCccceeecCCCCcchhhhhHHH---HhCcCccCCCCCeechhhhccCcCCCC
Confidence            47899999 9999999999999999   589999999999999999999999884

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}

Probab=99.53  E-value=2.2e-15  Score=101.83  Aligned_cols=51  Identities=29%  Similarity=0.662  Sum_probs=48.2

Q ss_pred             CCCceeEE-EeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCc
Q psy13753          2 DTSHQFQE-YTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ   55 (229)
Q Consensus         2 ~~~H~f~~-~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~   55 (229)
                      ..+|.|.+ ++|..||||++|+++|   ++|||+|++|++++|++|..+|+.+|.
T Consensus         8 ~~~H~F~~~~~~~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~v~~~C~   59 (59)
T 1rfh_A            8 GEGHRFVELALRGGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR   59 (59)
T ss_dssp             CSSCCCEECCCSSCCEECTTTCSEE---CSCCEECTTTSCEECHHHHTTCCCCCC
T ss_pred             CCCCcCeeeeccCCCeEchhcchhh---hhCccEeCCCCCeEehhhhhhCcCCCC
Confidence            57999999 9999999999999999   489999999999999999999999884

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=2.2e-15  Score=106.34  Aligned_cols=57  Identities=26%  Similarity=0.463  Sum_probs=50.5

Q ss_pred             cccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCC-CCCcC
Q psy13753        120 KLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPA-KCQPK  177 (229)
Q Consensus       120 ~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~-~C~~~  177 (229)
                      ...+|+|...++ ..||+|++|+++|||+.+||++|.+|++++|++|..+|+. .|...
T Consensus        14 ~~~~H~F~~~~f-~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~   71 (74)
T 2db6_A           14 NDKPHKFKDHFF-KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGP   71 (74)
T ss_dssp             CSSBCCEEEEEC-SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGSSSBCCCC
T ss_pred             cCCCCceEEeeC-CCCcCchhcChhhccccCCccccCCCCCccChhHHhhCCCCcCCCC
Confidence            446789987776 4799999999999999999999999999999999999996 58764

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=99.47  E-value=3.6e-14  Score=96.36  Aligned_cols=56  Identities=29%  Similarity=0.631  Sum_probs=51.6

Q ss_pred             CCCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         1 ~~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      +..+|.|+++++.+|++|++|++.|| +.+|||+|.+|++++|++|.+.++.+|.++
T Consensus         5 ~~~~H~F~~kt~~~~~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~~~~~~C~p~   60 (61)
T 4b6d_A            5 SMRLHDFVSKTVIKPESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRDRCPLPCIPT   60 (61)
T ss_dssp             CBCCCCEEEEECCSCEECTTTCCEEC-TTCEEEEESSSSCEECGGGGGGSCSSCCCC
T ss_pred             cccceeEEeeeccCCcccccccCEEE-EeeEeeECCCCCCeEchhHhhcCCCCCCCC
Confidence            35789999999999999999999885 889999999999999999999999999753

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.47  E-value=1.4e-14  Score=104.32  Aligned_cols=55  Identities=20%  Similarity=0.281  Sum_probs=49.4

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccC--ceEeeecccccchhccc---cCCCCCCcC
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQ--GLKCRLCKTNVHVDCQE---KVPAKCQPK  177 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~q--g~~C~~C~~~~H~~C~~---~v~~~C~~~  177 (229)
                      .+|.|...++ ..||+|++|+++|||+.+|  ||+|..|+++||++|.+   .|+..|+..
T Consensus        23 ~~H~F~~~~~-~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~   82 (84)
T 2row_A           23 KGHEFIPTLY-HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVY   82 (84)
T ss_dssp             TTEEEEEECC-SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTT
T ss_pred             CCcceEeEcC-CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcC
Confidence            4688876665 5799999999999999998  99999999999999999   799999864

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}

Probab=99.40  E-value=9.1e-14  Score=93.79  Aligned_cols=50  Identities=24%  Similarity=0.489  Sum_probs=44.6

Q ss_pred             cccceee-ecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCC
Q psy13753        122 SSHELKT-YSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ  175 (229)
Q Consensus       122 ~~h~~~~-~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~  175 (229)
                      .+|+|.. .++ ..|+||++|+++|   .+||++|.+|++++|++|.++|+.+|.
T Consensus         9 ~~H~F~~~~~~-~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~v~~~C~   59 (59)
T 1rfh_A            9 EGHRFVELALR-GGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR   59 (59)
T ss_dssp             SSCCCEECCCS-SCCEECTTTCSEE---CSCCEECTTTSCEECHHHHTTCCCCCC
T ss_pred             CCCcCeeeecc-CCCeEchhcchhh---hhCccEeCCCCCeEehhhhhhCcCCCC
Confidence            4688887 565 5799999999999   599999999999999999999999984

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A

Probab=99.39  E-value=1.3e-13  Score=90.45  Aligned_cols=50  Identities=20%  Similarity=0.394  Sum_probs=44.7

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP  176 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  176 (229)
                      ++|+|...++ ..|++|++|+++||    ||++|.+|++++|++|.+.|+.+|.+
T Consensus         2 ~~H~F~~~~~-~~pt~C~~C~~~l~----qG~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T 1faq_A            2 TTHNFARKTF-LKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             CCCCCEEECC-SSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             CCceeEeEeC-CCCcCCCCcccccc----cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence            4688876665 46999999999999    99999999999999999999999975

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}

Probab=99.36  E-value=2.9e-13  Score=94.89  Aligned_cols=50  Identities=24%  Similarity=0.489  Sum_probs=44.0

Q ss_pred             cccceee-ecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCC
Q psy13753        122 SSHELKT-YSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ  175 (229)
Q Consensus       122 ~~h~~~~-~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~  175 (229)
                      .+|+|.. .++ ..||||++|+++|   .+||++|.+|+++||++|..+|+..|.
T Consensus        22 ~~H~F~~~~~~-~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~V~~~C~   72 (72)
T 2fnf_X           22 EGHRFVELALR-GGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR   72 (72)
T ss_dssp             SSCCCEECCCC-SSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGGCCSCCC
T ss_pred             CCCccceeecC-CCCcchhhhhHHH---HhCcCccCCCCCeechhhhccCcCCCC
Confidence            3678877 554 5799999999999   589999999999999999999999984

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A

Probab=99.31  E-value=1.7e-12  Score=84.14  Aligned_cols=47  Identities=26%  Similarity=0.821  Sum_probs=42.8

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC   54 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C   54 (229)
                      ..+|.|..++|. +++|++|+.+||    |||+|++|++++|++|+..++ +|
T Consensus         2 ~i~HrF~~~t~~-~t~C~~C~k~i~----~G~kC~~Ck~~cH~kC~~~vp-~c   48 (49)
T 1kbe_A            2 SVTHRFSTKSWL-SQVCNVCQKSMI----FGVKCKHCRLKCHNKCTKEAP-AC   48 (49)
T ss_dssp             CCCCCEEEECCS-SCCCSSSCCSSC----CEEEETTTTEEESSSCTTTSC-CC
T ss_pred             CCCcccCccCCC-CcCccccCceeE----CcCCCCCCCCccchhhcCcCC-CC
Confidence            578999999998 599999999999    799999999999999999776 44

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=99.27  E-value=1.8e-12  Score=87.93  Aligned_cols=55  Identities=24%  Similarity=0.527  Sum_probs=48.1

Q ss_pred             ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753        121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK  177 (229)
Q Consensus       121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~  177 (229)
                      ..+|+|.+.++ ..+++|++|++.|| +.+|||+|.+|++.+|++|.+.++.+|.+.
T Consensus         6 ~~~H~F~~kt~-~~~~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~~~~~~C~p~   60 (61)
T 4b6d_A            6 MRLHDFVSKTV-IKPESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRDRCPLPCIPT   60 (61)
T ss_dssp             BCCCCEEEEEC-CSCEECTTTCCEEC-TTCEEEEESSSSCEECGGGGGGSCSSCCCC
T ss_pred             ccceeEEeeec-cCCcccccccCEEE-EeeEeeECCCCCCeEchhHhhcCCCCCCCC
Confidence            45799987665 46899999999885 889999999999999999999999999764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.14  E-value=2.2e-11  Score=112.87  Aligned_cols=58  Identities=33%  Similarity=0.759  Sum_probs=54.2

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      ...|.|..++|..|++|++|+++|||+.+||++|.+|+++||++|...++..|.....
T Consensus       207 v~~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~  264 (463)
T 3cxl_A          207 EKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLK  264 (463)
T ss_dssp             CBCCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGG
T ss_pred             CCCcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccc
Confidence            4579999999999999999999999999999999999999999999999999987543

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A

Probab=99.11  E-value=2.7e-11  Score=78.45  Aligned_cols=44  Identities=25%  Similarity=0.501  Sum_probs=37.9

Q ss_pred             ccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCC
Q psy13753        123 SHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPA  172 (229)
Q Consensus       123 ~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~  172 (229)
                      +|+|...++  .+++|++|+++||    ||++|.+|++++|.+|.+.||+
T Consensus         4 ~HrF~~~t~--~~t~C~~C~k~i~----~G~kC~~Ck~~cH~kC~~~vp~   47 (49)
T 1kbe_A            4 THRFSTKSW--LSQVCNVCQKSMI----FGVKCKHCRLKCHNKCTKEAPA   47 (49)
T ss_dssp             CCCEEEECC--SSCCCSSSCCSSC----CEEEETTTTEEESSSCTTTSCC
T ss_pred             CcccCccCC--CCcCccccCceeE----CcCCCCCCCCccchhhcCcCCC
Confidence            477777665  2599999999998    7999999999999999997763

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=99.09  E-value=4.1e-11  Score=113.91  Aligned_cols=57  Identities=32%  Similarity=0.849  Sum_probs=50.0

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      +++|.|..++|..||+|++|+.+|||+.+|||+|..|++++|++|...++ +|++...
T Consensus       516 ~~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v~-~C~~~~~  572 (587)
T 3ky9_A          516 ANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVP-PCGRHGQ  572 (587)
T ss_dssp             GGGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGSC-CC-----
T ss_pred             ccCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhcCC-CCCCCCc
Confidence            36899999999999999999999999999999999999999999999994 9987653

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.09  E-value=5e-11  Score=110.44  Aligned_cols=67  Identities=27%  Similarity=0.458  Sum_probs=58.8

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhhhhccCCchh
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSE  189 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~~~~~~~~~~  189 (229)
                      .+|.|...++ ..|++|++|+++|||+.+||++|.+|+++||++|...++..|+++.....+.++.+.
T Consensus       208 ~~h~f~~~~~-~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~~~~~vFG~~L  274 (463)
T 3cxl_A          208 KIHNFKVHTF-RGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDL  274 (463)
T ss_dssp             BCCCEEEECC-SSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGGGCCCCTTSCH
T ss_pred             CCcceEEeec-CCCCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccccccccccccc
Confidence            4788887665 479999999999999999999999999999999999999999988777667777654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.04  E-value=2e-11  Score=117.74  Aligned_cols=60  Identities=22%  Similarity=0.428  Sum_probs=0.0

Q ss_pred             cccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753        118 AGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS  178 (229)
Q Consensus       118 ~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~  178 (229)
                      ++..++|.|...++ ..||||++|+++|||+.+||++|..|+++||++|..+|+..|....
T Consensus        32 ~~~~~~H~f~~~~~-~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~   91 (674)
T 3pfq_A           32 VHEVKNHKFTARFF-KQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGAD   91 (674)
T ss_dssp             -------------------------------------------------------------
T ss_pred             CcccCCceEEeeeC-CCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcc
Confidence            55667899876554 4699999999999999999999999999999999999999996653

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=99.04  E-value=9.8e-11  Score=106.26  Aligned_cols=56  Identities=32%  Similarity=0.847  Sum_probs=49.5

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR   59 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~   59 (229)
                      .+|.|..+++..||+|++|+.++||+.+||++|..|++++|++|..+++. |+....
T Consensus       345 ~~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~-C~~~~~  400 (406)
T 2vrw_B          345 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPP-CGRHGQ  400 (406)
T ss_dssp             GGCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCC-C-----
T ss_pred             CCCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCC-CCCCch
Confidence            57999999999999999999999999999999999999999999999995 987654

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=98.85  E-value=1.5e-09  Score=98.51  Aligned_cols=58  Identities=21%  Similarity=0.439  Sum_probs=46.8

Q ss_pred             ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753        121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL  180 (229)
Q Consensus       121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~  180 (229)
                      ..+|.|...++ ..||+|.+|+.++||+.+||++|..|++++|++|...|+. |+.....
T Consensus       344 ~~~h~f~~~~~-~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~-C~~~~~~  401 (406)
T 2vrw_B          344 ANGHDFQMFSF-EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPP-CGRHGQD  401 (406)
T ss_dssp             GGGCCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCC-C------
T ss_pred             CCCCCCccccC-CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCC-CCCCchh
Confidence            45788876655 4699999999999999999999999999999999999995 9886543

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=98.80  E-value=2.2e-09  Score=101.99  Aligned_cols=56  Identities=20%  Similarity=0.446  Sum_probs=46.9

Q ss_pred             ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753        121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS  178 (229)
Q Consensus       121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~  178 (229)
                      .++|.|...++ ..||+|++|+++|||+.+||++|..|+++||++|...| ..|+...
T Consensus       516 ~~~H~F~~~~~-~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~~  571 (587)
T 3ky9_A          516 ANGHDFQMFSF-EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRHG  571 (587)
T ss_dssp             GGGCCEEEECC-SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC----
T ss_pred             ccCCceeEEeC-CCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCCC
Confidence            35788886665 47999999999999999999999999999999999999 4898764

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1

Probab=98.37  E-value=4.2e-07  Score=65.12  Aligned_cols=43  Identities=26%  Similarity=0.469  Sum_probs=37.0

Q ss_pred             CcccccCCCCCCC-CccCceEeeecccccchhccccCCCCCCcC
Q psy13753        135 PRLVVTSPGGPGG-HTRQGLKCRLCKTNVHVDCQEKVPAKCQPK  177 (229)
Q Consensus       135 pt~C~~C~~~i~g-~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~  177 (229)
                      ..+|..|...+++ +..+|++|.||++.+|.+|.+.++..|..+
T Consensus        38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~eC~lG   81 (84)
T 1r79_A           38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP   81 (84)
T ss_dssp             TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred             CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccCcCCCC
Confidence            3579999888775 356999999999999999999999999765

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1

Probab=97.80  E-value=1.1e-05  Score=57.78  Aligned_cols=55  Identities=27%  Similarity=0.571  Sum_probs=48.0

Q ss_pred             CCceeEEEeeCCcccCccCcccccc-cccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRG-HTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~G-l~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      ..|.|..-.+..+++|++|.+.+++ +.-+|++|.-|++.+|.+|...++..|.-.
T Consensus        26 ~~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~eC~lG   81 (84)
T 1r79_A           26 MPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP   81 (84)
T ss_dssp             BCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred             ceeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccCcCCCC
Confidence            4699999988888999999999875 344999999999999999999999888643

>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3

Probab=93.78  E-value=0.048  Score=38.91  Aligned_cols=44  Identities=18%  Similarity=0.441  Sum_probs=34.0

Q ss_pred             CceeEEEeeCCcccCccCcccccccccCeeeeCCCCCccccccccccc
Q psy13753          4 SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP   51 (229)
Q Consensus         4 ~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~   51 (229)
                      .|.+.... ..+.+|+.|++..-|   -.|.|..|+|..|..|+..-+
T Consensus        37 ~H~L~L~~-~~~~~C~~C~~~~~~---~~Y~C~~C~f~lH~~Ca~~p~   80 (89)
T 1v5n_A           37 EHELELTR-VQVYTCDKCEEEGTI---WSYHCDECDFDLHAKCALNED   80 (89)
T ss_dssp             TSCEEEEC-CSSCCCTTTSCCCCS---CEEECTTTCCCCCHHHHHCSS
T ss_pred             CCccEEee-CCCeEeCCCCCcCCC---cEEEcCCCCCeEcHHhcCCCC
Confidence            46666643 347899999997644   469999999999999987544

>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3

Probab=86.74  E-value=0.3  Score=34.68  Aligned_cols=34  Identities=12%  Similarity=0.168  Sum_probs=27.8

Q ss_pred             CcccccCCCCCCCCccCceEeeecccccchhccccCC
Q psy13753        135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVP  171 (229)
Q Consensus       135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~  171 (229)
                      +-+|+.|+..+.|   -.|+|..|++..|.+|...-+
T Consensus        47 ~~~C~~C~~~~~~---~~Y~C~~C~f~lH~~Ca~~p~   80 (89)
T 1v5n_A           47 VYTCDKCEEEGTI---WSYHCDECDFDLHAKCALNED   80 (89)
T ss_dssp             SCCCTTTSCCCCS---CEEECTTTCCCCCHHHHHCSS
T ss_pred             CeEeCCCCCcCCC---cEEEcCCCCCeEcHHhcCCCC
Confidence            4579999987554   459999999999999987544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	229
d1xa6a3	62	g.49.1.1 (A:209-270) Beta-chimaerin, middle domain	6e-16
d1xa6a3	62	g.49.1.1 (A:209-270) Beta-chimaerin, middle domain	7e-07
d1ptqa_	50	g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {M	2e-14
d1ptqa_	50	g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {M	2e-05
d1tbna_	66	g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus	3e-13
d1tbna_	66	g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus	7e-05
d1faqa_	52	g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId:	3e-12
d1faqa_	52	g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId:	4e-05
d1r79a_	84	g.49.1.1 (A:) Diacylglycerol kinase delta {Human (	4e-11
d1r79a_	84	g.49.1.1 (A:) Diacylglycerol kinase delta {Human (	6e-04
d1kbea_	49	g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse	5e-09
d1kbea_	49	g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse	6e-04

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 6e-16
 Identities = 19/59 (32%), Positives = 33/59 (55%)

Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLR 62
          +H F+ +T++    C+ C+  + G   QG++C  C  NVH  C + VP  CQP  + ++
Sbjct: 4  THNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIK 62

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 7e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLR 182
           G   QG++C  C  NVH  C + VP  CQP  + ++
Sbjct: 27  GLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIK 62

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]} Length = 50

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.5 bits (154), Expect = 2e-14
 Identities = 24/50 (48%), Positives = 29/50 (58%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          H+F+ Y Y   T CD C  +L G  +QGLKC  C  NVH  C+EKV   C
Sbjct: 1  HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]} Length = 50

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
           G  +QGLKC  C  NVH  C+EKV   C
Sbjct: 23  GLVKQGLKCEDCGMNVHHKCREKVANLC 50

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]} Length = 66

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 60.4 bits (146), Expect = 3e-13
 Identities = 21/55 (38%), Positives = 29/55 (52%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 59
          H+F+ ++Y   T CD C  +L G   QG+KC  C+ NVH  C   VP+ C     
Sbjct: 9  HKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT 63

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]} Length = 66

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 37.7 bits (87), Expect = 7e-05
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 147 GHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 179
           G   QG+KC  C+ NVH  C   VP+ C     
Sbjct: 31  GLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT 63

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 52

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 3e-12
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 3  TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54
          T+H F   T+ K+  CDIC + L      G +C+ C    H  C  KVP  C
Sbjct: 2  TTHNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMC 49

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 52

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 146 GGHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
                 G +C+ C    H  C  KVP  C
Sbjct: 21  QKFLLNGFRCQTCGYKFHEHCSTKVPTMC 49

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 4e-11
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 5  HQFQEYTYKKITPCDICSQVLRGHTR-QGLKCRLCKTNVHVDCQEKVPAKC 54
          HQ+ E        C +C +      R Q  +C  CK  VH  C+E +  KC
Sbjct: 28 HQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKC 78

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 6e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 146 GGHTRQGLKCRLCKTNVHVDCQEKVPAKC 174
                Q  +C  CK  VH  C+E +  KC
Sbjct: 50  SVLRLQDWRCLWCKAMVHTSCKESLLTKC 78

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]} Length = 49

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.7 bits (116), Expect = 5e-09
 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 4  SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPA 52
          +H+F   ++     C++C + +      G+KC+ C+   H  C ++ PA
Sbjct: 4  THRFSTKSWLSQV-CNVCQKSMI----FGVKCKHCRLKCHNKCTKEAPA 47

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]} Length = 49

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.4 bits (79), Expect = 6e-04
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 150 RQGLKCRLCKTNVHVDCQEKVPA 172
             G+KC+ C+   H  C ++ PA
Sbjct: 25  IFGVKCKHCRLKCHNKCTKEAPA 47

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	229
d1xa6a3	62	Beta-chimaerin, middle domain {Human (Homo sapiens	99.63
d1ptqa_	50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	99.61
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	99.59
d1xa6a3	62	Beta-chimaerin, middle domain {Human (Homo sapiens	99.5
d1ptqa_	50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	99.46
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	99.45
d1faqa_	52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	99.4
d1kbea_	49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	99.36
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	99.27
d1faqa_	52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1kbea_	49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	99.08
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	99.07
d1v5na_	89	Pdi-like hypothetical protein At1g60420 {Thale cre	94.14
d1v5na_	89	Pdi-like hypothetical protein At1g60420 {Thale cre	91.72

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.1e-16  Score=107.64  Aligned_cols=57  Identities=33%  Similarity=0.794  Sum_probs=54.2

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccch
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS   58 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~   58 (229)
                      +++|.|+..+|..|++|++|+++|||+.+|||+|++|++++|++|...++..|..+.
T Consensus         2 ~k~H~F~~~~~~~pt~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~   58 (62)
T d1xa6a3           2 EKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDL   58 (62)
T ss_dssp             CCCCCCCEECCSSCCBCTTTCCBCCTTTTCEECCSSSCCCBCTGGGTTSCSCCCTTT
T ss_pred             CCCCEEEEeeCCCCCCCcccCccccccccCeEEcCCCCchhhHHHHhhCCCcCCCCh
Confidence            579999999999999999999999999999999999999999999999999998654

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=1.7e-16  Score=102.21  Aligned_cols=50  Identities=48%  Similarity=0.941  Sum_probs=48.6

Q ss_pred             ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753          5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC   54 (229)
Q Consensus         5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C   54 (229)
                      |.|+..+|..|++|++|+++|||+.+|||+|++|++++|++|.+.++.+|
T Consensus         1 H~F~~~~~~~~~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T d1ptqa_           1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC   50 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred             CceEEecCCCCcCCcccCCcccCcccCcEECCCCCCeeChhHcccccCCC
Confidence            89999999999999999999999999999999999999999999999877

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.59  E-value=4.9e-16  Score=105.67  Aligned_cols=56  Identities=38%  Similarity=0.774  Sum_probs=53.1

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      .++|.|..++|..|++|++|+++|||+.+|||+|.+|++++|++|...++..|+..
T Consensus         6 ~~~H~F~~~~~~~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~   61 (66)
T d1tbna_           6 RNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVD   61 (66)
T ss_dssp             CCSCCEEECCSSSCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCC
T ss_pred             CCCCceEEEeCCCCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCC
Confidence            46899999999999999999999999999999999999999999999999999654

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.5e-15  Score=99.14  Aligned_cols=58  Identities=29%  Similarity=0.546  Sum_probs=51.3

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL  180 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~  180 (229)
                      ++|+|..+++ ..|++|++|.++|||+.+||++|.+|++.+|++|.+.|+..|+++...
T Consensus         3 k~H~F~~~~~-~~pt~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~~   60 (62)
T d1xa6a3           3 KTHNFKVHTF-RGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKR   60 (62)
T ss_dssp             CCCCCCEECC-SSCCBCTTTCCBCCTTTTCEECCSSSCCCBCTGGGTTSCSCCCTTTTS
T ss_pred             CCCEEEEeeC-CCCCCCcccCccccccccCeEEcCCCCchhhHHHHhhCCCcCCCChhh
Confidence            3688876665 469999999999999999999999999999999999999999986543

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=1.6e-14  Score=92.70  Aligned_cols=50  Identities=40%  Similarity=0.659  Sum_probs=44.7

Q ss_pred             cceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCC
Q psy13753        124 HELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKC  174 (229)
Q Consensus       124 h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C  174 (229)
                      |+|..+++ ..|++|++|.++|||+.+||++|.+|++++|++|.+.|+..|
T Consensus         1 H~F~~~~~-~~~~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T d1ptqa_           1 HRFKVYNY-MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC   50 (50)
T ss_dssp             CCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred             CceEEecC-CCCcCCcccCCcccCcccCcEECCCCCCeeChhHcccccCCC
Confidence            56665555 468999999999999999999999999999999999999877

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.45  E-value=2.7e-14  Score=96.90  Aligned_cols=56  Identities=30%  Similarity=0.538  Sum_probs=49.9

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS  178 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~  178 (229)
                      ++|.|...++ ..|++|++|.++|||+.+|||+|.+|++++|++|.+.|+..|+...
T Consensus         7 ~~H~F~~~~~-~~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~   62 (66)
T d1tbna_           7 NKHKFRLHSY-SSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDH   62 (66)
T ss_dssp             CSCCEEECCS-SSCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCC
T ss_pred             CCCceEEEeC-CCCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCc
Confidence            3688887665 4689999999999999999999999999999999999999997653

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9.5e-14  Score=89.76  Aligned_cols=50  Identities=38%  Similarity=0.875  Sum_probs=47.5

Q ss_pred             CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753          3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP   56 (229)
Q Consensus         3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~   56 (229)
                      ++|.|..++|..|++|++|+++||    |||+|++|++++|++|..+++.+|..
T Consensus         2 ~~H~F~~~~f~~~~~C~~C~~~i~----~g~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T d1faqa_           2 TTHNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             CCCCCEEECCSSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             CceEEEEeeCCCCcCCccCCCccc----cCCCcCCCCChhhhhhhccccccccC
Confidence            689999999999999999999998    89999999999999999999999863

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=3.1e-13  Score=86.12  Aligned_cols=48  Identities=25%  Similarity=0.827  Sum_probs=43.8

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ   55 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~   55 (229)
                      ...|.|+.++|..|+ |++|+++||    |||+|++|++++|++|.+.+| +|.
T Consensus         2 ~i~H~F~~~~~~~~t-C~~C~~~l~----qg~~C~~C~~~~Hk~C~~~~P-~C~   49 (49)
T d1kbea_           2 SVTHRFSTKSWLSQV-CNVCQKSMI----FGVKCKHCRLKCHNKCTKEAP-ACR   49 (49)
T ss_dssp             CCCCCEEEECCSSCC-CSSSCCSSC----CEEEETTTTEEESSSCTTTSC-CCC
T ss_pred             CCccEEeecCcCCCC-chhhchhhh----CcCCcCCCCChHhHhhcccCC-CCC
Confidence            568999999998776 999999998    899999999999999999998 673

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=7.2e-13  Score=93.85  Aligned_cols=56  Identities=27%  Similarity=0.552  Sum_probs=51.4

Q ss_pred             CCCceeEEEeeCCcccCccCcccccccc-cCeeeeCCCCCcccccccccccCCCccc
Q psy13753          2 DTSHQFQEYTYKKITPCDICSQVLRGHT-RQGLKCRLCKTNVHVDCQEKVPAKCQPK   57 (229)
Q Consensus         2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~-~qgl~C~~C~~~~Hk~C~~~v~~~C~~~   57 (229)
                      ..+|.|...+|..+++|++|++.|||+. .|||+|..|++++|++|...++..|...
T Consensus        25 ~~~H~w~~~n~~~~~~C~~C~~~i~~~~~~qg~~C~~C~~~~H~~C~~~v~~~C~~P   81 (84)
T d1r79a_          25 AMPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP   81 (84)
T ss_dssp             CBCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred             CCCceEEeCCCCCCCCCcccCcccCCccccCcEecCcCCchhhhhhcCCCCCcCcCC
Confidence            3569999999999999999999999964 7999999999999999999999999743

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.1e-12  Score=81.86  Aligned_cols=50  Identities=20%  Similarity=0.394  Sum_probs=44.0

Q ss_pred             cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753        122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP  176 (229)
Q Consensus       122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  176 (229)
                      +.|+|...++ ..|++|++|+++||    ||++|.+|++.+|++|.+.|+..|..
T Consensus         2 ~~H~F~~~~f-~~~~~C~~C~~~i~----~g~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T d1faqa_           2 TTHNFARKTF-LKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             CCCCCEEECC-SSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             CceEEEEeeC-CCCcCCccCCCccc----cCCCcCCCCChhhhhhhccccccccC
Confidence            4688876665 46999999999998    89999999999999999999999964

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.8e-11  Score=76.86  Aligned_cols=46  Identities=26%  Similarity=0.520  Sum_probs=38.3

Q ss_pred             ccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCC
Q psy13753        123 SHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ  175 (229)
Q Consensus       123 ~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~  175 (229)
                      +|+|...++ ..++ |++|.++||    ||++|.+|++++|++|.+.|| .|.
T Consensus         4 ~H~F~~~~~-~~~t-C~~C~~~l~----qg~~C~~C~~~~Hk~C~~~~P-~C~   49 (49)
T d1kbea_           4 THRFSTKSW-LSQV-CNVCQKSMI----FGVKCKHCRLKCHNKCTKEAP-ACR   49 (49)
T ss_dssp             CCCEEEECC-SSCC-CSSSCCSSC----CEEEETTTTEEESSSCTTTSC-CCC
T ss_pred             ccEEeecCc-CCCC-chhhchhhh----CcCCcCCCCChHhHhhcccCC-CCC
Confidence            477765554 3455 999999998    899999999999999999998 573

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=7e-11  Score=83.37  Aligned_cols=53  Identities=23%  Similarity=0.359  Sum_probs=44.4

Q ss_pred             cceeeecccCCCcccccCCCCCCCCc-cCceEeeecccccchhccccCCCCCCcC
Q psy13753        124 HELKTYSRQNSPRLVVTSPGGPGGHT-RQGLKCRLCKTNVHVDCQEKVPAKCQPK  177 (229)
Q Consensus       124 h~~~~~~~~~~pt~C~~C~~~i~g~~-~qg~~C~~C~~~~H~~C~~~v~~~C~~~  177 (229)
                      |.|...++ ..+++|++|...|||+. +||++|.+|++++|++|.+.++..|...
T Consensus        28 H~w~~~n~-~~~~~C~~C~~~i~~~~~~qg~~C~~C~~~~H~~C~~~v~~~C~~P   81 (84)
T d1r79a_          28 HQWLEGNL-PVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP   81 (84)
T ss_dssp             CCEEESCC-CTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred             ceEEeCCC-CCCCCCcccCcccCCccccCcEecCcCCchhhhhhcCCCCCcCcCC
Confidence            55544333 25889999999999974 7999999999999999999999999854

>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: C1-like domain
domain: Pdi-like hypothetical protein At1g60420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.14  E-value=0.018  Score=39.59  Aligned_cols=43  Identities=19%  Similarity=0.444  Sum_probs=34.4

Q ss_pred             CceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccc
Q psy13753          4 SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV   50 (229)
Q Consensus         4 ~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v   50 (229)
                      .|.+... ...+..|+.|++.+.|   -.|.|..|+|..|..|+...
T Consensus        37 ~H~L~L~-~~~~~~C~~C~~~~~g---~~Y~C~~C~f~LH~~CA~~P   79 (89)
T d1v5na_          37 EHELELT-RVQVYTCDKCEEEGTI---WSYHCDECDFDLHAKCALNE   79 (89)
T ss_dssp             TSCEEEE-CCSSCCCTTTSCCCCS---CEEECTTTCCCCCHHHHHCS
T ss_pred             CCCeEEe-cCCCCEeCCCCCCcCC---cEeEeccCCCEecHHHcCCC
Confidence            4766654 3456799999998876   46999999999999999654

>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: C1-like domain
domain: Pdi-like hypothetical protein At1g60420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.72  E-value=0.046  Score=37.35  Aligned_cols=32  Identities=13%  Similarity=0.225  Sum_probs=27.3

Q ss_pred             CcccccCCCCCCCCccCceEeeecccccchhcccc
Q psy13753        135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEK  169 (229)
Q Consensus       135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~  169 (229)
                      +.+|+.|+..+.|+   .|+|..|++..|..|+..
T Consensus        47 ~~~C~~C~~~~~g~---~Y~C~~C~f~LH~~CA~~   78 (89)
T d1v5na_          47 VYTCDKCEEEGTIW---SYHCDECDFDLHAKCALN   78 (89)
T ss_dssp             SCCCTTTSCCCCSC---EEECTTTCCCCCHHHHHC
T ss_pred             CCEeCCCCCCcCCc---EeEeccCCCEecHHHcCC
Confidence            45799999887763   599999999999999864