Psyllid ID: psy13836

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MVKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTEK
Secondary Structure (PSIPRED)
cccccEEEEEEEccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHEEEEEcccHHHHHHHHHHHHHHHHHccccccccccccccHHHEEHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvktplrmllfisdpedvknneDKIYSIAKRyggipagesngrrgYMLTYIIAYIRDFACdyyfigdsfetsvpwdkTVLLCINVKKRLTRECTEK
Flexible Loop (DISEMBL)
mvktplrmllfisdpedvknnEDKIYSIakryggipagesngrRGYMLTYIIAYIRDFACDYYFIGDSfetsvpwdktVLLCINvkkrltrectek
Low Complexity Region (SEG)
MVKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTEK
Disordered region (IsUnstruct)
*******MLLFIS*********DKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRL*******
Disordered Region (DISOPRED)
*VKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLT*E****
Disordered Region (DISEMBL)
MVKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTEK
Disordered Region (DISPRO)
*VKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTEK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTEK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	96	2.2.26 [Sep-21-2011]
O00116	658	Alkyldihydroxyacetonephos	yes	N/A	0.916	0.133	0.613	7e-29
P97275	658	Alkyldihydroxyacetonephos	yes	N/A	0.916	0.133	0.590	9e-28
Q8C0I1	645	Alkyldihydroxyacetonephos	yes	N/A	0.916	0.136	0.579	2e-27
Q9EQR2	644	Alkyldihydroxyacetonephos	yes	N/A	0.916	0.136	0.556	5e-27
Q9V778	631	Alkyldihydroxyacetonephos	yes	N/A	0.916	0.139	0.522	7e-23
O45218	597	Alkyldihydroxyacetonephos	yes	N/A	0.802	0.128	0.454	2e-16

>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1

 Score =  125 bits (314), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 527

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 528 FETSAPWDRVVDLCRNVKERITRECKEK 555

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 6

>sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1

 Score =  122 bits (305), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/88 (59%), Positives = 67/88 (76%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+ REC EK
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRRECKEK 555

Cavia porcellus (taxid: 10141)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/88 (57%), Positives = 67/88 (76%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY IG+S
Sbjct: 455 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYVIGES 514

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ + LC NVK+R+ REC E+
Sbjct: 515 FETSAPWDRVIDLCRNVKERIRRECKER 542

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1

 Score =  119 bits (298), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 67/88 (76%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY +G+S
Sbjct: 454 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYVVGES 513

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ + LC NVK+R+ REC E+
Sbjct: 514 FETSAPWDRVIDLCRNVKERIRRECKER 541

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1

 Score =  105 bits (263), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/88 (52%), Positives = 63/88 (71%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D +DV+  E  IY IA+++ G PAG  NG RGY+LT++IAYIRDF      + +S
Sbjct: 420 LLFEGDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIRDFGLHQGIVAES 479

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETSVPWD+  LLC +VK+R+  EC+++
Sbjct: 480 FETSVPWDRCSLLCRSVKQRVVSECSKR 507

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 55/77 (71%)

Query: 16  EDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPW 75
           E+V  +E+++  +A+++ G+  G  NG+ GY LT+ IAY+RD   ++  +G+SFETSVPW
Sbjct: 404 EEVDQHEERLNKLAEQFHGVVGGAENGQYGYRLTFAIAYLRDLGMNHGVLGESFETSVPW 463

Query: 76  DKTVLLCINVKKRLTRE 92
           DK + LC NVK+ + RE
Sbjct: 464 DKVLSLCRNVKELMKRE 480

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
426337844	626	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.140	0.613	2e-27
119631463	684	alkylglycerone phosphate synthase, isofo	0.916	0.128	0.613	2e-27
327284179	634	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.138	0.613	2e-27
355565004	550	hypothetical protein EGK_04575, partial	0.916	0.16	0.613	2e-27
297668926	668	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.131	0.613	2e-27
119631462	536	alkylglycerone phosphate synthase, isofo	0.916	0.164	0.613	3e-27
403258679	652	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.134	0.613	3e-27
390464346	652	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.134	0.613	3e-27
390464348	568	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.154	0.613	3e-27
402888755	660	PREDICTED: alkyldihydroxyacetonephosphat	0.916	0.133	0.613	3e-27

>gi|426337844|ref|XP_004032904.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal [Gorilla gorilla gorilla]

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 436 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 495

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 496 FETSAPWDRVVDLCRNVKERITRECKEK 523

Source: Gorilla gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|119631463|gb|EAX11058.1| alkylglycerone phosphate synthase, isoform CRA_b [Homo sapiens]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 494 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 553

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 554 FETSAPWDRVVDLCRNVKERITRECKEK 581

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327284179|ref|XP_003226816.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal-like [Anolis carolinensis]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 68/88 (77%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGYMLT++IAYIRD   DYY IG+S
Sbjct: 444 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYMLTFVIAYIRDMGLDYYIIGES 503

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETSVPWD+ + LC NVK+R+ REC EK
Sbjct: 504 FETSVPWDRVLDLCRNVKERIARECKEK 531

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355565004|gb|EHH21493.1| hypothetical protein EGK_04575, partial [Macaca mulatta]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 360 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 419

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 420 FETSAPWDRVVDLCRNVKERITRECKEK 447

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|297668926|ref|XP_002812675.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal [Pongo abelii]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 478 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 537

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 538 FETSAPWDRVVDLCRNVKERITRECKEK 565

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|119631462|gb|EAX11057.1| alkylglycerone phosphate synthase, isoform CRA_a [Homo sapiens]

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 346 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 405

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 406 FETSAPWDRVVDLCRNVKERITRECKEK 433

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403258679|ref|XP_003921880.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 1 [Saimiri boliviensis boliviensis]

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 462 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 521

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 522 FETSAPWDRVVDLCRNVKERITRECKEK 549

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390464346|ref|XP_002749324.2| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 1 [Callithrix jacchus]

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 462 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 521

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 522 FETSAPWDRVVDLCKNVKERITRECKEK 549

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390464348|ref|XP_003733208.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 2 [Callithrix jacchus]

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 378 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 437

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 438 FETSAPWDRVVDLCKNVKERITRECKEK 465

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402888755|ref|XP_003907714.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal [Papio anubis]

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 470 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 529

Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+TREC EK
Sbjct: 530 FETSAPWDRVVDLCRNVKERITRECKEK 557

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
UNIPROTKB|O00116	658	AGPS "Alkyldihydroxyacetonepho	0.916	0.133	0.613	4.3e-26
UNIPROTKB|E1BPV2	576	AGPS "Uncharacterized protein"	0.916	0.152	0.602	6.1e-26
UNIPROTKB|E2QVV9	653	AGPS "Uncharacterized protein"	0.916	0.134	0.602	8.8e-26
UNIPROTKB|F6Y1U6	663	AGPS "Uncharacterized protein"	0.916	0.132	0.602	9.2e-26
UNIPROTKB|J9NZ69	699	AGPS "Uncharacterized protein"	0.916	0.125	0.602	1e-25
UNIPROTKB|I3LM15	646	AGPS "Uncharacterized protein"	0.916	0.136	0.602	1.1e-25
UNIPROTKB|F1P5J7	638	AGPS "Uncharacterized protein"	0.916	0.137	0.602	1.4e-25
UNIPROTKB|P97275	658	AGPS "Alkyldihydroxyacetonepho	0.916	0.133	0.590	5.1e-25
MGI|MGI:2443065	645	Agps "alkylglycerone phosphate	0.916	0.136	0.579	8.1e-25
RGD|620364	644	Agps "alkylglycerone phosphate	0.916	0.136	0.556	2.2e-24

UNIPROTKB|O00116 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Homo sapiens (taxid:9606)]

 Score = 303 (111.7 bits), Expect = 4.3e-26, P = 4.3e-26
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct:   468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 527

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+TREC EK
Sbjct:   528 FETSAPWDRVVDLCRNVKERITRECKEK 555

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISS;TAS

GO:0071949 "FAD binding" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0008610 "lipid biosynthetic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|E1BPV2 AGPS "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 300 (110.7 bits), Expect = 6.1e-26, P = 6.1e-26
 Identities = 53/88 (60%), Positives = 68/88 (77%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   386 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 445

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+TREC EK
Sbjct:   446 FETSAPWDRVVDLCRNVKERITRECKEK 473

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

UNIPROTKB|E2QVV9 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 8.8e-26, P = 8.8e-26
 Identities = 53/88 (60%), Positives = 68/88 (77%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   463 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 522

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+TREC EK
Sbjct:   523 FETSAPWDRVVDLCRNVKERITRECKEK 550

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|F6Y1U6 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 9.2e-26, P = 9.2e-26
 Identities = 53/88 (60%), Positives = 68/88 (77%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   473 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 532

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+TREC EK
Sbjct:   533 FETSAPWDRVVDLCRNVKERITRECKEK 560

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|J9NZ69 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 1.0e-25, P = 1.0e-25
 Identities = 53/88 (60%), Positives = 68/88 (77%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   469 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 528

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+TREC EK
Sbjct:   529 FETSAPWDRVVDLCRNVKERITRECKEK 556

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|I3LM15 AGPS "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 299 (110.3 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 53/88 (60%), Positives = 68/88 (77%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   496 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYVLGES 555

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+TREC EK
Sbjct:   556 FETSAPWDRVVDLCRNVKERITRECKEK 583

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

UNIPROTKB|F1P5J7 AGPS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 298 (110.0 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 53/88 (60%), Positives = 68/88 (77%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGYMLT++IAY+RD   DYY IG+S
Sbjct:   448 LLFEGDREKVLQHEKQVYDIATKFGGLAAGEDNGQRGYMLTFVIAYLRDLGLDYYVIGES 507

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETSVPWD+ + LC NVK+R+ REC EK
Sbjct:   508 FETSVPWDRVLDLCRNVKERIVRECKEK 535

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

UNIPROTKB|P97275 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Cavia porcellus (taxid:10141)]

 Score = 293 (108.2 bits), Expect = 5.1e-25, P = 5.1e-25
 Identities = 52/88 (59%), Positives = 67/88 (76%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct:   468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ V LC NVK+R+ REC EK
Sbjct:   528 FETSAPWDRVVDLCRNVKERIRRECKEK 555

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IDA

GO:0008611 "ether lipid biosynthetic process" evidence=IDA

GO:0071949 "FAD binding" evidence=IDA

MGI|MGI:2443065 Agps "alkylglycerone phosphate synthase" [Mus musculus (taxid:10090)]

 Score = 291 (107.5 bits), Expect = 8.1e-25, P = 8.1e-25
 Identities = 51/88 (57%), Positives = 67/88 (76%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY IG+S
Sbjct:   455 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYVIGES 514

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ + LC NVK+R+ REC E+
Sbjct:   515 FETSAPWDRVIDLCRNVKERIRRECKER 542

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=ISO

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|620364 Agps "alkylglycerone phosphate synthase" [Rattus norvegicus (taxid:10116)]

 Score = 287 (106.1 bits), Expect = 2.2e-24, P = 2.2e-24
 Identities = 49/88 (55%), Positives = 67/88 (76%)

Query:     9 LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
             LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY +G+S
Sbjct:   454 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYVVGES 513

Query:    69 FETSVPWDKTVLLCINVKKRLTRECTEK 96
             FETS PWD+ + LC NVK+R+ REC E+
Sbjct:   514 FETSAPWDRVIDLCRNVKERIRRECKER 541

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005777 "peroxisome" evidence=ISO;IDA;TAS

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=ISO;IDA

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISS

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IEP

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0071949 "FAD binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9EQR2	ADAS_RAT	2, ., 5, ., 1, ., 2, 6	0.5568	0.9166	0.1366	yes	N/A
O00116	ADAS_HUMAN	2, ., 5, ., 1, ., 2, 6	0.6136	0.9166	0.1337	yes	N/A
P97275	ADAS_CAVPO	2, ., 5, ., 1, ., 2, 6	0.5909	0.9166	0.1337	yes	N/A
Q9V778	ADAS_DROME	2, ., 5, ., 1, ., 2, 6	0.5227	0.9166	0.1394	yes	N/A
Q8C0I1	ADAS_MOUSE	2, ., 5, ., 1, ., 2, 6	0.5795	0.9166	0.1364	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	96
KOG1233|consensus	613		99.86
PF02913	248	FAD-oxidase_C: FAD linked oxidases, C-terminal dom	98.91
TIGR00387	413	glcD glycolate oxidase, subunit GlcD. This protein	98.37
PRK11230	499	glycolate oxidase subunit GlcD; Provisional	98.08
PLN02805	555	D-lactate dehydrogenase [cytochrome]	97.83
COG3286	204	Uncharacterized protein conserved in archaea [Func	93.46
PF09840	190	DUF2067: Uncharacterized protein conserved in arch	83.17

>KOG1233|consensus

Probab=99.86  E-value=1.8e-22  Score=160.25  Aligned_cols=95  Identities=47%  Similarity=0.901  Sum_probs=92.6

Q ss_pred             CcccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhchhhhhhhhhhhcccceeeeeccccccchHHH
Q psy13836          2 VKTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLL   81 (96)
Q Consensus         2 ~~~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l   81 (96)
                      ++.|.+++.|||+.++|+.+++++++|+.+++|+..|..+|+..|..+|.++|+||+-+.+|++.|+|||++|||++..|
T Consensus       416 nqicaATllfEGdre~V~qhE~~~y~iAekF~G~~aG~~NGqrGY~LTfvIAYiRDlgl~~gvlgESFETSvPWDrv~~L  495 (613)
T KOG1233|consen  416 NQICAATLLFEGDREEVDQHEERLYKIAEKFHGVVAGAENGQRGYRLTFVIAYIRDLGLNHGVLGESFETSVPWDRVLSL  495 (613)
T ss_pred             hhhhhhhheecccHHHHHHHHHHHHHHHHHhCCccccccccccceEEEEeHHHHHhhcccccchhhcccccCCHHHHHHH
Confidence            56799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC
Q psy13836         82 CINVKKRLTRECTEK   96 (96)
Q Consensus        82 ~~~v~~al~~~~~~~   96 (96)
                      |++|++.+.++|+++
T Consensus       496 CRnVKer~~rEck~~  510 (613)
T KOG1233|consen  496 CRNVKERMKRECKAQ  510 (613)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999874

>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage

Probab=98.91  E-value=1.2e-09  Score=77.79  Aligned_cols=89  Identities=22%  Similarity=0.265  Sum_probs=73.4

Q ss_pred             cccEEEEEEecChH-HhHhHHH-HHHHHHHHcCCCc-----CCCcchhhhhhhhchhhhhhhhhhhcccceeeeeccccc
Q psy13836          3 KTPLRMLLFISDPE-DVKNNED-KIYSIAKRYGGIP-----AGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPW   75 (96)
Q Consensus         3 ~~cll~~gfeG~~~-~v~~~~~-~~~~i~~~~GG~~-----~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~W   75 (96)
                      ..|++++.|+|+++ .++.+.+ .+.++++++|+..     -.+...+-|...++..||+++.....|...+|+|+++||
T Consensus        58 ~~~~llv~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~~~~~~~~~W~~R~~~~~~~~~~~~~~~~~~~~~dv~vp~  137 (248)
T PF02913_consen   58 GGAVLLVEFEGSDEEAVEEQLEAEIEEICKKYGGEDVVIADDEEEQERLWAIRRAIMPYLRDAAGRAGPVWDTEDVAVPP  137 (248)
T ss_dssp             TSEEEEEECCCHHHCCHHHHHHHHHHHHHCTCTCCEEEEEHCHHCTSTHHHHHHHHCCGGGCSHCTTEEEEEEEEEESCH
T ss_pred             cccEEEEEECCCcHHHHHHHHHHHHHHHHhhcCCceeEEeCCHHHHHhhhhhhhhhcccccccccccCCceeeeeecccc
Confidence            45799999999994 5666666 7888888888764     122345678877777789999999999999999999999


Q ss_pred             cchHHHHHHHHHHHHH
Q psy13836         76 DKTVLLCINVKKRLTR   91 (96)
Q Consensus        76 s~~~~l~~~v~~al~~   91 (96)
                      ++++++++.+++.+.+
T Consensus       138 ~~l~~~~~~~~~~~~~  153 (248)
T PF02913_consen  138 SRLPEFLREIRALLRE  153 (248)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHhhhhhhhh
Confidence            9999999999988765

The region around the histidine that binds the FAD group is conserved in these enzymes (see IPR006093 from INTERPRO).; GO: 0003824 catalytic activity, 0050660 flavin adenine dinucleotide binding; PDB: 1WVE_B 1DII_B 1WVF_A 1DIQ_A 2UUU_B 2UUV_A 1W1M_A 1E8H_B 1E0Y_B 1DZN_B ....

>TIGR00387 glcD glycolate oxidase, subunit GlcD

Probab=98.37  E-value=8.8e-07  Score=69.92  Aligned_cols=84  Identities=14%  Similarity=0.132  Sum_probs=66.5

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcC----C-Ccchhhhhhhhchhhhhhhhhhhcccceeeeeccccccch
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPA----G-ESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKT   78 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~----G-~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~   78 (96)
                      .|++++.|+|+.+.++.+.+++.++++++|+...    + +...+.|...++..|++++.. ...+   +.|+++||+++
T Consensus       231 ~~~l~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~r~~~~~~~~~~~-~~~~---~~d~~vp~~~l  306 (413)
T TIGR00387       231 GAILLVEIDGVHEAVERDEEKIEQICRKNGAVDVQIAQDEEERALLWAGRRNAFKAASKLS-PLYL---IEDGTVPRSKL  306 (413)
T ss_pred             ceEEEEEecCCcHHHHHHHHHHHHHHHhCCCceEEEeCCHHHHHHHHHHHHHhHHHHHhhC-CCcc---eeEEecCHHHH
Confidence            4789999999999999999999999999988532    1 245667888788788988742 2222   45799999999


Q ss_pred             HHHHHHHHHHHHH
Q psy13836         79 VLLCINVKKRLTR   91 (96)
Q Consensus        79 ~~l~~~v~~al~~   91 (96)
                      +++++.+++.+.+
T Consensus       307 ~~~~~~~~~~~~~  319 (413)
T TIGR00387       307 PEALRGIADIARK  319 (413)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887754

This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.

>PRK11230 glycolate oxidase subunit GlcD; Provisional

Probab=98.08  E-value=1.1e-05  Score=65.55  Aligned_cols=83  Identities=7%  Similarity=0.035  Sum_probs=62.7

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcCC-----Ccchhhhhhhhchhhhhhhhhhhcccceeeeeccccccch
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAG-----ESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKT   78 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G-----~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~   78 (96)
                      .+++++.|+|+++.++.+.+++.++++++|+..+.     +...+.|..-+...|+++..  ..+++.  .++++||+++
T Consensus       288 ~~~ll~e~~g~~~~v~~~~~~l~~~~~~~g~~~~~~a~~~~~~~~~W~~R~~~~~~~~~~--~~~~~~--~dv~vP~~~l  363 (499)
T PRK11230        288 EAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRI--SPDYYC--MDGTIPRREL  363 (499)
T ss_pred             ceEEEEEecCCchHHHHHHHHHHHHHHhcCCceEEEeCCHHHHHHHHHHHHhhHHHHHhh--CCCeeE--EeecCChHHH
Confidence            47899999999999999999999999999975332     12345676633456787762  334444  4999999999


Q ss_pred             HHHHHHHHHHHH
Q psy13836         79 VLLCINVKKRLT   90 (96)
Q Consensus        79 ~~l~~~v~~al~   90 (96)
                      +++++.+++...
T Consensus       364 ~~~~~~~~~~~~  375 (499)
T PRK11230        364 PGVLEGIARLSQ  375 (499)
T ss_pred             HHHHHHHHHHHH
Confidence            999999987554

>PLN02805 D-lactate dehydrogenase [cytochrome]

Probab=97.83  E-value=7.5e-05  Score=61.70  Aligned_cols=85  Identities=16%  Similarity=0.080  Sum_probs=61.2

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCC--cCCCc---chhhhhhhhchh-hhhhhhhhhcccceeeeeccccccc
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGI--PAGES---NGRRGYMLTYII-AYIRDFACDYYFIGDSFETSVPWDK   77 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~--~~G~~---~g~~W~~~rf~~-pYlRd~l~~~G~~~DTlETA~~Ws~   77 (96)
                      .|++++.|+|+++.++.+.+.+.+|++++|+.  .+...   ..+.|.. |-.. |.+..  ...+....+.++++|||+
T Consensus       363 ~~~Ll~e~~g~~~~~~~~~~~~~~i~~~~g~~~~~~a~~~~e~~~lW~~-R~~~~~~~~~--~~~~~~~~~~DvaVP~s~  439 (555)
T PLN02805        363 APTLMFEFIGTEAYAREQTLIVQKIASKHNGSDFVFAEEPEAKKELWKI-RKEALWACFA--MEPKYEAMITDVCVPLSH  439 (555)
T ss_pred             ceEEEEEEecCcHHHHHHHHHHHHHHHhCCCceEEEeCCHHHHHHHHHH-HHHHHHHHhh--cCCCCceeEEEEEEEHHH
Confidence            48999999999999999999999999999985  22222   2445663 4333 22221  123444567899999999


Q ss_pred             hHHHHHHHHHHHHH
Q psy13836         78 TVLLCINVKKRLTR   91 (96)
Q Consensus        78 ~~~l~~~v~~al~~   91 (96)
                      ++++++.+++.+.+
T Consensus       440 L~e~i~~~~~~~~~  453 (555)
T PLN02805        440 LAELISRSKKELDA  453 (555)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887653

>COG3286 Uncharacterized protein conserved in archaea [Function unknown]

Probab=93.46  E-value=0.39  Score=35.51  Aligned_cols=86  Identities=12%  Similarity=0.124  Sum_probs=60.2

Q ss_pred             EEEEEecChHHhHhHHHHHHHHHHHcCCCcCCCcch-----hhhhhhhchhh--hhhhhhhhccccee----eeeccccc
Q psy13836          7 RMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNG-----RRGYMLTYIIA--YIRDFACDYYFIGD----SFETSVPW   75 (96)
Q Consensus         7 l~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G~~~g-----~~W~~~rf~~p--YlRd~l~~~G~~~D----TlETA~~W   75 (96)
                      +.+=..|.++.++...+.+.++.+..-+..-+...|     .--...+=+.|  -|.|.|--+|+=++    -++|++||
T Consensus        39 vkV~v~G~~~eireair~irel~~~vr~r~~~~~~~ly~l~~~~~~a~p~Vp~~vl~daLk~~GyrVevr~~~l~T~ap~  118 (204)
T COG3286          39 VKVNVFGTKDEIREAIRAIRELHRRVRRRLYPDRQGLYTLYRIFEEASPNVPPDVLIDALKLLGYRVEVRGGELKTNAPW  118 (204)
T ss_pred             EEEEEecchHHHHHHHHHHHHHHHHHHhhhccCccceEeeHhHHHhhcCCCCHHHHHHHHHhCCceEEeeCceeecCCCH
Confidence            344567889999999999999888776654332211     11122222233  59999999998764    58999999


Q ss_pred             cchHHHHHHHHHHHHHH
Q psy13836         76 DKTVLLCINVKKRLTRE   92 (96)
Q Consensus        76 s~~~~l~~~v~~al~~~   92 (96)
                      |-+.++..++-+..+++
T Consensus       119 ~ev~E~vreLse~~~E~  135 (204)
T COG3286         119 SEVVELVRELSEVYREA  135 (204)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999998887776553

>PF09840 DUF2067: Uncharacterized protein conserved in archaea (DUF2067); InterPro: IPR019202 This family of archaeal proteins, have no known function

Probab=83.17  E-value=9.2  Score=27.84  Aligned_cols=85  Identities=11%  Similarity=0.023  Sum_probs=59.2

Q ss_pred             EEEEEecChHHhHhHHHHHHHHHHHcCCCcCCCcc-----hhhhhh--hhchhhhhhhhhhhcccce----eeeeccccc
Q psy13836          7 RMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESN-----GRRGYM--LTYIIAYIRDFACDYYFIG----DSFETSVPW   75 (96)
Q Consensus         7 l~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G~~~-----g~~W~~--~rf~~pYlRd~l~~~G~~~----DTlETA~~W   75 (96)
                      +.+=..|++.+++...+.+.++.+...+..-+.+.     -.--++  ..|..|-|-|.|--.|+=+    |.+.|++||
T Consensus        36 l~I~i~G~~~eike~~~~Ik~~~~~vr~k~~~~g~~~y~l~~i~r~a~~~vp~d~L~~~L~~~G~~ae~~~~~i~T~a~~  115 (190)
T PF09840_consen   36 LKIEIQGYEKEIKEAIRRIKELVRRVRSKYNKRGLYRYSLDDIFREAGYPVPPDLLVDALKLLGYKAEYREDVIKTDAPL  115 (190)
T ss_pred             EEEEEecChHHHHHHHHHHHHHHHHHHHHhccCCceEEcHHHHHHHcCCCCCHHHHHHHHHhCCCeeEEeCCeEEecCCH
Confidence            45566788889988888888887766653222211     111111  3344456899998888765    589999999


Q ss_pred             cchHHHHHHHHHHHHH
Q psy13836         76 DKTVLLCINVKKRLTR   91 (96)
Q Consensus        76 s~~~~l~~~v~~al~~   91 (96)
                      +.+.++-+++-++..+
T Consensus       116 eev~~l~~~Lse~~~e  131 (190)
T PF09840_consen  116 EEVVELAERLSEIYKE  131 (190)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999877654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	96
4bc7_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		6e-29
4bca_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		6e-29
4bby_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		8e-29

>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658

Iteration: 1
 Score =  122 bits (305), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527
Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+ REC EK
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRRECKEK 555

>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658

Iteration: 1
 Score =  122 bits (305), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527
Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+ REC EK
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRRECKEK 555

>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658

Iteration: 1
 Score =  122 bits (305), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 9   LLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 68
           LLF  D E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527
Query: 69  FETSVPWDKTVLLCINVKKRLTRECTEK 96
           FETS PWD+ V LC NVK+R+ REC EK
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRRECKEK 555

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	96
2uuu_A	584	Alkyldihydroxyacetonephosphate synthase; transfera	4e-19

>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584

 Score = 79.4 bits (196), Expect = 4e-19
 Identities = 19/91 (20%), Positives = 36/91 (39%)

Query: 5   PLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYF 64
            L ++ F    + V  +   ++ I  +      G + G+      Y + YIRDF  D+  
Sbjct: 393 CLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNM 452

Query: 65  IGDSFETSVPWDKTVLLCINVKKRLTRECTE 95
             D  ET+V +     L  + K+   +   +
Sbjct: 453 WVDVAETTVSYANLQTLWKDAKQTFVKHFKD 483

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	96
2uuu_A	584	Alkyldihydroxyacetonephosphate synthase; transfera	99.45
4bby_A	658	Alkyldihydroxyacetonephosphate synthase, peroxiso;	99.33
1e8g_A	560	Vanillyl-alcohol oxidase; oxidoreductase, flavoenz	97.94
1f0x_A	571	DLDH, D-lactate dehydrogenase; oxidoreductase; HET	97.76
3pm9_A	476	Putative oxidoreductase; putative D-2-hydroxygluta	97.58
2exr_A	524	Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin	97.08
1wvf_A	520	4-cresol dehydrogenase [hydroxylating] flavoprote	96.22
1hsk_A	326	UDP-N-acetylenolpyruvoylglucosamine reductase; pep	82.71

>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*

Probab=99.45  E-value=1.5e-13  Score=111.45  Aligned_cols=93  Identities=20%  Similarity=0.298  Sum_probs=86.9

Q ss_pred             cccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhchhhhhhhhhhhcccceeeeeccccccchHHHH
Q psy13836          3 KTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLC   82 (96)
Q Consensus         3 ~~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l~   82 (96)
                      ..|++++.|+|+++.|+.+.+++.++|+++||..+++...+.|+..|+..||+|+.++++|.+.+++||++|||++++++
T Consensus       391 ~~~~llve~~g~~~~v~~~~~~~~~~~~~~g~~~~~~~~~~lW~~r~~~~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~  470 (584)
T 2uuu_A          391 NVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLW  470 (584)
T ss_dssp             TCEEEEEEEEECHHHHHHHHHHHHHHHHTTTCEEEEEESTTHHHHGGGGHHHHHHHHHTTTEEEEEEEEEEEHHHHHHHH
T ss_pred             ccEEEEEEEecChHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHhhhchHHHHhhhcccCCccccceEEeeHHHHHHHH
Confidence            46899999999999999999999999999999888888899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q psy13836         83 INVKKRLTRECTE   95 (96)
Q Consensus        83 ~~v~~al~~~~~~   95 (96)
                      +.+++.+.+.+.+
T Consensus       471 ~~~~~~l~~~~~~  483 (584)
T 2uuu_A          471 KDAKQTFVKHFKD  483 (584)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHhHHHh
Confidence            9999998887764

>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*

Probab=99.33  E-value=3.6e-12  Score=104.13  Aligned_cols=93  Identities=55%  Similarity=1.066  Sum_probs=88.2

Q ss_pred             cccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhchhhhhhhhhhhcccceeeeeccccccchHHHH
Q psy13836          3 KTPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLC   82 (96)
Q Consensus         3 ~~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l~   82 (96)
                      ..|++++.|||+.+.+..+.+.+.++++++||+..++..++.|...||..||+|+..++.+.+.+++||++|||++++++
T Consensus       462 ~~~~~~~~~eg~~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~avP~~~l~~~~  541 (658)
T 4bby_A          462 QLSVATLLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGESFETSAPWDRVVDLC  541 (658)
T ss_dssp             TCEEEEEEEEECHHHHHHHHHHHHHHHHTTTCEECCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEGGGHHHHH
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHHHHHHhhCcchhhhhHHHHHHHHhhHHHHHHhhccccCCccceEEEEeeHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q psy13836         83 INVKKRLTRECTE   95 (96)
Q Consensus        83 ~~v~~al~~~~~~   95 (96)
                      +++++.+.+.+.+
T Consensus       542 ~~v~~~l~~~~~~  554 (658)
T 4bby_A          542 RNVKERIRRECKE  554 (658)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999887653

>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*

Probab=97.94  E-value=2.3e-05  Score=62.89  Aligned_cols=87  Identities=8%  Similarity=-0.147  Sum_probs=64.9

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcC--CCcc--hhhhhhhhchh----hhhhhh---hhhcccceeeeecc
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPA--GESN--GRRGYMLTYII----AYIRDF---ACDYYFIGDSFETS   72 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~--G~~~--g~~W~~~rf~~----pYlRd~---l~~~G~~~DTlETA   72 (96)
                      .|++++.|+|+++.|+.+.+++.+|++++|+..+  .+.+  .+.|.. |+..    |+++..   .|..|-...+++++
T Consensus       350 ~~~l~~e~~g~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~-R~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~  428 (560)
T 1e8g_A          350 RWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRV-RDKTMQGIPTYDELKWIDWLPNGAHLFFSPI  428 (560)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHH-HHHHTTTCCCCGGGGGGGGSTTEEEEEECBE
T ss_pred             ceEEEEEEeCCHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHH-HHhhcccCchhhhhccccccCCCceEEEeee
Confidence            5789999999999999999999999999998533  3222  344554 7654    776653   23333335668999


Q ss_pred             ccc--cchHHHHHHHHHHHHH
Q psy13836         73 VPW--DKTVLLCINVKKRLTR   91 (96)
Q Consensus        73 ~~W--s~~~~l~~~v~~al~~   91 (96)
                      +||  |+++++++.+++.+.+
T Consensus       429 vP~~~~~l~~~~~~~~~~~~~  449 (560)
T 1e8g_A          429 AKVSGEDAMMQYAVTKKRCQE  449 (560)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHH
Confidence            999  9999999999776543

>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1

Probab=97.76  E-value=6.9e-06  Score=66.61  Aligned_cols=84  Identities=10%  Similarity=0.055  Sum_probs=63.5

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcC--CCcchhhhhhhhchhh----hhhhhhhh-cccceeeeecccccc
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPA--GESNGRRGYMLTYIIA----YIRDFACD-YYFIGDSFETSVPWD   76 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~--G~~~g~~W~~~rf~~p----YlRd~l~~-~G~~~DTlETA~~Ws   76 (96)
                      .+.+++-|+|+....  ..+.+.+++++++|...  .++.+++|...||..+    ++|+...+ .| .+.++|||+||+
T Consensus       389 ~~~llve~~g~~~~~--~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~~~~~g-~~~~~Dvavp~~  465 (571)
T 1f0x_A          389 EHHLLLKMAGDGVGE--AKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVE-DILALDIALRRN  465 (571)
T ss_dssp             SEEEEEEECTTHHHH--HHHHHHHHHHHSSCEEEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEE-EEEEEEEECCTT
T ss_pred             ceEEEEEEecCcHHH--HHHHHHHHHHHcCCCeeecCccHHHHHHHHhhhhhhHHHHhhhcchhhcC-CceEEEEEecHH
Confidence            378899999887643  25566678888866433  5677888888999997    68887665 33 368999999999


Q ss_pred             chHHHHHHHHHHHHH
Q psy13836         77 KTVLLCINVKKRLTR   91 (96)
Q Consensus        77 ~~~~l~~~v~~al~~   91 (96)
                      +++.+ +.+++.+.+
T Consensus       466 ~l~~~-~~~~~~l~~  479 (571)
T 1f0x_A          466 DTEWY-EHLPPEIDS  479 (571)
T ss_dssp             CSCCS-CCCCHHHHT
T ss_pred             HhHHH-HHHHHHHHh
Confidence            99999 888777654

>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}

Probab=97.58  E-value=0.00025  Score=56.03  Aligned_cols=83  Identities=11%  Similarity=-0.039  Sum_probs=62.0

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCc---CC---Ccchhhhhhhhchhh-hhhhhhhhcccceeeeecccccc
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIP---AG---ESNGRRGYMLTYIIA-YIRDFACDYYFIGDSFETSVPWD   76 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~---~G---~~~g~~W~~~rf~~p-YlRd~l~~~G~~~DTlETA~~Ws   76 (96)
                      .+++++-|+|+.+.++.+.+++.+++.++|+..   +-   +...+-|. .|-..+ .++    ..|. ..+.++++|||
T Consensus       288 ~~~llve~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~~~~~~~lW~-~R~~~~~~~~----~~g~-~~~~Dv~vP~~  361 (476)
T 3pm9_A          288 PWYVLIELSSPRDDARAALESILERGFEDGIVVDAAIANSVQQQQAFWK-LREEISPAQK----PEGG-SIKHDISVPVA  361 (476)
T ss_dssp             SEEEEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHH-HHHTHHHHTG----GGCC-EECCEEECCGG
T ss_pred             CeEEEEEEccCcHHHHHHHHHHHHHHHhcCCCcceEEeCCHHHHHHHHH-HHHHHHHHHh----hcCC-ceeEEEEeeHH
Confidence            589999999999889899999999999998752   11   12334564 444443 333    3354 68999999999


Q ss_pred             chHHHHHHHHHHHHHH
Q psy13836         77 KTVLLCINVKKRLTRE   92 (96)
Q Consensus        77 ~~~~l~~~v~~al~~~   92 (96)
                      +++++++.+++.+.+.
T Consensus       362 ~l~~~~~~~~~~~~~~  377 (476)
T 3pm9_A          362 AVPQFIEQANAAVVAL  377 (476)
T ss_dssp             GHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999888764

>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*

Probab=97.08  E-value=0.00011  Score=58.52  Aligned_cols=76  Identities=9%  Similarity=-0.094  Sum_probs=57.0

Q ss_pred             cccEEEEEE-----ec-ChHHhHhHHHHHHHHHHHcCCCcCCCc----------chhhhhhhhchhhhhhhhhhhcccce
Q psy13836          3 KTPLRMLLF-----IS-DPEDVKNNEDKIYSIAKRYGGIPAGES----------NGRRGYMLTYIIAYIRDFACDYYFIG   66 (96)
Q Consensus         3 ~~cll~~gf-----eG-~~~~v~~~~~~~~~i~~~~GG~~~G~~----------~g~~W~~~rf~~pYlRd~l~~~G~~~   66 (96)
                      ..|++++-|     +| +++.|+.+.+.+.++++.+||....+.          ....|...++..|.+..     .   
T Consensus       310 ~~~~llve~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~-----~---  381 (524)
T 2exr_A          310 GSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPH-----P---  381 (524)
T ss_dssp             CSEEEEEEEEEEECTTSCHHHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCC-----C---
T ss_pred             ccEEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhCCCeEeecccchhhhhhhhhhHHHHhhhhcccccCC-----C---
Confidence            347888888     89 788899999999999999999755432          22337766665554432     1   


Q ss_pred             eeeeccccccchHHHHHHHHH
Q psy13836         67 DSFETSVPWDKTVLLCINVKK   87 (96)
Q Consensus        67 DTlETA~~Ws~~~~l~~~v~~   87 (96)
                       ++++++|||+++++.+.|.+
T Consensus       382 -~~Dv~VP~s~l~~~~~~v~~  401 (524)
T 2exr_A          382 -WLNLFVSKRDIGDFNRTVFK  401 (524)
T ss_dssp             -CEEEEEEHHHHHHHHHHCCC
T ss_pred             -eeEEEECHHHHHHHHHHHHH
Confidence             36999999999999988743

>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*

Probab=96.22  E-value=0.015  Score=45.91  Aligned_cols=84  Identities=10%  Similarity=-0.157  Sum_probs=53.4

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhchhhhhhhhhh----------------hccccee
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFAC----------------DYYFIGD   67 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~----------------~~G~~~D   67 (96)
                      .+++++.|+|++++++.+.+.+.++++++|+..+.   ...+.+ +-...++|..+.                ..+.+.+
T Consensus       319 ~~~l~~~~~g~~~~v~~~~~~i~~~~~~~~~~~~~---~~~~~~-~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (520)
T 1wvf_A          319 AWNLYAALYGTQEQVDVNWKIVTDVFKKLGKGRIV---TQEEAG-DTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWF  394 (520)
T ss_dssp             SEEEEEEEEESHHHHHHHHHHHHHHHHHHTCCEEE---EHHHHT-TCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEE
T ss_pred             ceEEEEEEeCCHHHHHHHHHHHHHHHHHcCCeEEE---ecccch-hhhHHHHHHHhhccCchhhhhccccccCCCceEEe
Confidence            46888889999999999999999999999986432   112211 122223333222                0123333


Q ss_pred             eeeccccccchHHHHHHHHHHHHH
Q psy13836         68 SFETSVPWDKTVLLCINVKKRLTR   91 (96)
Q Consensus        68 TlETA~~Ws~~~~l~~~v~~al~~   91 (96)
                      +.-...+|++++++++.+++.+.+
T Consensus       395 d~~vp~~~~~l~~~~~~~~~~~~~  418 (520)
T 1wvf_A          395 APVSEARGSECKKQAAMAKRVLHK  418 (520)
T ss_dssp             CBEEESCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHH
Confidence            444555669999999888776543

>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1

Probab=82.71  E-value=0.85  Score=34.00  Aligned_cols=39  Identities=18%  Similarity=0.022  Sum_probs=34.3

Q ss_pred             cccEEEEEEec-ChHHhHhHHHHHHHHHHHcCCCcCCCcc
Q psy13836          3 KTPLRMLLFIS-DPEDVKNNEDKIYSIAKRYGGIPAGESN   41 (96)
Q Consensus         3 ~~cll~~gfeG-~~~~v~~~~~~~~~i~~~~GG~~~G~~~   41 (96)
                      +.|++++-++| +.+++....+.+.+++++++|+.++.++
T Consensus       270 ~~a~~lvn~~ga~~~~v~~~~~~v~~~v~~~~gi~le~Ev  309 (326)
T 1hsk_A          270 KHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREV  309 (326)
T ss_dssp             SCTTCEEECSSCCHHHHHHHHHHHHHHHHHHHSCCCCBCS
T ss_pred             cccEEEEECCCCCHHHHHHHHHHHHHHHHHhhCCeeEEEE
Confidence            45788999999 7788999999999999999999888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	96
d1wvfa1	279	Flavoprotein subunit of p-cresol methylhydroxylase	98.16
d1e8ga1	287	Vanillyl-alcohol oxidase {Fungus (Penicillium simp	97.67

>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]

Probab=98.16  E-value=3e-06  Score=59.99  Aligned_cols=88  Identities=10%  Similarity=-0.070  Sum_probs=64.4

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcC---CCcc-hhhhhhhh---chhhhhhhhhhh-----cccceeeeec
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPA---GESN-GRRGYMLT---YIIAYIRDFACD-----YYFIGDSFET   71 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~---G~~~-g~~W~~~r---f~~pYlRd~l~~-----~G~~~DTlET   71 (96)
                      .|.+++.++|+++.|+.+.+++.+|++++||..+   .... .+.|...|   +..|+++...+.     .|.+..+..+
T Consensus        78 ~w~l~~~l~G~~~~v~~~~~~i~~i~~~~~~~~~~~a~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  157 (279)
T d1wvfa1          78 AWNLYAALYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVS  157 (279)
T ss_dssp             SEEEEEEEEESHHHHHHHHHHHHHHHHHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEE
T ss_pred             ceeEEEEeecCHHHHHHHHHHHHHHHHHCCCceEEeCCCHHHHHHHHHHHHhhhhhhhhhhhhHhhcCCCCCcceeeeee
Confidence            5789999999999999999999999999999654   1111 22233222   445666665443     3556666678


Q ss_pred             cccccchHHHHHHHHHHHHH
Q psy13836         72 SVPWDKTVLLCINVKKRLTR   91 (96)
Q Consensus        72 A~~Ws~~~~l~~~v~~al~~   91 (96)
                      +++||+++++++.+++.+.+
T Consensus       158 p~~~s~l~~~~~~~~~~~~~  177 (279)
T d1wvfa1         158 EARGSECKKQAAMAKRVLHK  177 (279)
T ss_dssp             ESCHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHH
Confidence            89999999999998877654

>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Vanillyl-alcohol oxidase
species: Fungus (Penicillium simplicissimum) [TaxId: 69488]

Probab=97.67  E-value=9.4e-05  Score=51.92  Aligned_cols=88  Identities=6%  Similarity=-0.269  Sum_probs=63.3

Q ss_pred             ccEEEEEEecChHHhHhHHHHHHHHHHHcCCCcC----CCcchhhhhhh-hch------hhhhhhhhhhcccceeeeecc
Q psy13836          4 TPLRMLLFISDPEDVKNNEDKIYSIAKRYGGIPA----GESNGRRGYML-TYI------IAYIRDFACDYYFIGDSFETS   72 (96)
Q Consensus         4 ~cll~~gfeG~~~~v~~~~~~~~~i~~~~GG~~~----G~~~g~~W~~~-rf~------~pYlRd~l~~~G~~~DTlETA   72 (96)
                      .+.++++++|+++.|+.+.+.+.++++++||..+    .....+.|... ++.      .++......+.+...++.+++
T Consensus        77 ~~~~~~~l~G~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  156 (287)
T d1e8ga1          77 RWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLPNGAHLFFSPIA  156 (287)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHHHHHHTTTCCCCGGGGGGGGSTTEEEEEECBEE
T ss_pred             hhheeeecccCHHHHHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHHHHHhHhhhhhhhhhHHhhcCCCCeeeeecee
Confidence            4678999999999999999999999999999643    11222333332 321      234455556677888999999


Q ss_pred             ccccc-hHHHHHHHHHHHHH
Q psy13836         73 VPWDK-TVLLCINVKKRLTR   91 (96)
Q Consensus        73 ~~Ws~-~~~l~~~v~~al~~   91 (96)
                      +++++ ++.+++.+++...+
T Consensus       157 ~~~~~~l~~~~~~~~~~~~~  176 (287)
T d1e8ga1         157 KVSGEDAMMQYAVTKKRCQE  176 (287)
T ss_dssp             CSSHHHHHHHHHHHHHHHHH
T ss_pred             ccChHHHHHHHHHHHHHHHH
Confidence            99975 88888877665543