Psyllid ID: psy13956


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80---
MLKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG
ccEEcccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccc
ccHHHHHcccEEEEEEccccccEEcccccccccccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHcc
mlkaqkrlgsrtavvdnnsntekrrkntrkpktdqsvsgeevpyflgvpldgdlsyykskyttreKLHSEVILTWVSNFARSG
mlkaqkrlgsrtavvdnnsntekrrkntrkpktdqsvsgeevpyflgvpldgDLSYYKSKYTTREKLHSEVILTWVSNFARSG
MLKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG
*****************************************VPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNF****
********GSRTAVVDNNSNTE*****TRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG
***********TAVVDNN********************GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG
*L***KRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
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MLKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query83 2.2.26 [Sep-21-2011]
Q9NZ94 848 Neuroligin-3 OS=Homo sapi yes N/A 0.698 0.068 0.310 5e-05
Q62889 848 Neuroligin-3 OS=Rattus no yes N/A 0.698 0.068 0.310 6e-05
Q8BYM5 825 Neuroligin-3 OS=Mus muscu yes N/A 0.698 0.070 0.310 6e-05
Q8WMH2 202 Neuroligin-3 (Fragment) O no N/A 0.650 0.267 0.333 8e-05
Q8NFZ3 816 Neuroligin-4, Y-linked OS no N/A 0.650 0.066 0.333 0.0001
Q8N0W4 816 Neuroligin-4, X-linked OS no N/A 0.650 0.066 0.333 0.0001
Q62888 836 Neuroligin-2 OS=Rattus no no N/A 0.650 0.064 0.296 0.0003
Q69ZK9 836 Neuroligin-2 OS=Mus muscu no N/A 0.650 0.064 0.296 0.0003
Q8N2Q7 840 Neuroligin-1 OS=Homo sapi no N/A 0.638 0.063 0.320 0.0004
Q99K10 843 Neuroligin-1 OS=Mus muscu no N/A 0.638 0.062 0.320 0.0004
>sp|Q9NZ94|NLGN3_HUMAN Neuroligin-3 OS=Homo sapiens GN=NLGN3 PE=1 SV=2 Back     alignment and function desciption
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 34/58 (58%)

Query: 26  KNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83
           ++  KP    +  G+EVPY  GVP+ G    +   ++  + + S V++T+ +NFA++G
Sbjct: 511 QSLMKPAWSDAAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 568




Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.
Homo sapiens (taxid: 9606)
>sp|Q62889|NLGN3_RAT Neuroligin-3 OS=Rattus norvegicus GN=Nlgn3 PE=1 SV=1 Back     alignment and function description
>sp|Q8BYM5|NLGN3_MOUSE Neuroligin-3 OS=Mus musculus GN=Nlgn3 PE=1 SV=2 Back     alignment and function description
>sp|Q8WMH2|NLGN3_MACMU Neuroligin-3 (Fragment) OS=Macaca mulatta GN=NLGN3 PE=2 SV=1 Back     alignment and function description
>sp|Q8NFZ3|NLGNY_HUMAN Neuroligin-4, Y-linked OS=Homo sapiens GN=NLGN4Y PE=2 SV=1 Back     alignment and function description
>sp|Q8N0W4|NLGNX_HUMAN Neuroligin-4, X-linked OS=Homo sapiens GN=NLGN4X PE=1 SV=1 Back     alignment and function description
>sp|Q62888|NLGN2_RAT Neuroligin-2 OS=Rattus norvegicus GN=Nlgn2 PE=1 SV=1 Back     alignment and function description
>sp|Q69ZK9|NLGN2_MOUSE Neuroligin-2 OS=Mus musculus GN=Nlgn2 PE=1 SV=2 Back     alignment and function description
>sp|Q8N2Q7|NLGN1_HUMAN Neuroligin-1 OS=Homo sapiens GN=NLGN1 PE=1 SV=2 Back     alignment and function description
>sp|Q99K10|NLGN1_MOUSE Neuroligin-1 OS=Mus musculus GN=Nlgn1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query83
91082045 1208 PREDICTED: similar to neuroligin, putati 0.602 0.041 0.5 5e-07
270007292 947 hypothetical protein TcasGA2_TC013849 [T 0.602 0.052 0.5 5e-07
357612653 1021 hypothetical protein KGM_10921 [Danaus p 0.602 0.048 0.46 4e-06
328715548 1226 PREDICTED: neuroligin-4, Y-linked-like [ 0.590 0.039 0.489 5e-06
307196068 672 Neuroligin-1 [Harpegnathos saltator] 0.638 0.078 0.433 6e-06
224809498 807 neuroligin 3 precursor [Apis mellifera] 0.915 0.094 0.365 6e-06
332025966 670 Neuroligin-4, X-linked [Acromyrmex echin 0.638 0.079 0.433 7e-06
307189590 617 Neuroligin-1 [Camponotus floridanus] 0.638 0.085 0.433 7e-06
307175318 1286 Neuroligin-4, X-linked [Camponotus flori 0.590 0.038 0.489 8e-06
242010062 1021 predicted protein [Pediculus humanus cor 0.638 0.051 0.452 1e-05
>gi|91082045|ref|XP_971146.1| PREDICTED: similar to neuroligin, putative [Tribolium castaneum] Back     alignment and taxonomy information
 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 34  DQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83
           D+S +GEE+PY  GVPL G   ++   YT +E+L SEV++T+ SNFA +G
Sbjct: 477 DKSYTGEELPYVFGVPLGGSRFHFTDYYTEKERLFSEVMMTYFSNFAYTG 526




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007292|gb|EFA03740.1| hypothetical protein TcasGA2_TC013849 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|357612653|gb|EHJ68103.1| hypothetical protein KGM_10921 [Danaus plexippus] Back     alignment and taxonomy information
>gi|328715548|ref|XP_001943569.2| PREDICTED: neuroligin-4, Y-linked-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307196068|gb|EFN77791.1| Neuroligin-1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|224809498|ref|NP_001139208.1| neuroligin 3 precursor [Apis mellifera] gi|222354852|gb|ACM48187.1| neuroligin 3 [Apis mellifera] Back     alignment and taxonomy information
>gi|332025966|gb|EGI66119.1| Neuroligin-4, X-linked [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307189590|gb|EFN73951.1| Neuroligin-1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307175318|gb|EFN65346.1| Neuroligin-4, X-linked [Camponotus floridanus] Back     alignment and taxonomy information
>gi|242010062|ref|XP_002425795.1| predicted protein [Pediculus humanus corporis] gi|212509728|gb|EEB13057.1| predicted protein [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query83
UNIPROTKB|Q8WMH2 202 NLGN3 "Neuroligin-3" [Macaca m 0.650 0.267 0.333 1.7e-05
UNIPROTKB|Q5XXC9 646 Q5XXC9 "NLGN4Y" [Pan troglodyt 0.650 0.083 0.333 5.1e-05
UNIPROTKB|F1NGC1609 NLGN4X "Uncharacterized protei 0.650 0.088 0.333 7.7e-05
UNIPROTKB|G3X7N7 632 NLGN4Y "Uncharacterized protei 0.650 0.085 0.333 8.1e-05
ZFIN|ZDB-GENE-100309-2 843 nlgn4a "neuroligin 4a" [Danio 0.650 0.064 0.333 9.1e-05
FB|FBgn0083963 1159 CG34127 [Drosophila melanogast 0.638 0.045 0.377 0.0001
UNIPROTKB|I3LVN7 546 NLGN3 "Uncharacterized protein 0.650 0.098 0.333 0.00011
UNIPROTKB|F1Q335 816 NLGN4X "Uncharacterized protei 0.650 0.066 0.333 0.00011
UNIPROTKB|Q8N0W4 816 NLGN4X "Neuroligin-4, X-linked 0.650 0.066 0.333 0.00011
UNIPROTKB|Q8NFZ3 816 NLGN4Y "Neuroligin-4, Y-linked 0.650 0.066 0.333 0.00011
UNIPROTKB|Q8WMH2 NLGN3 "Neuroligin-3" [Macaca mulatta (taxid:9544)] Back     alignment and assigned GO terms
 Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query:    30 KPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83
             KP    +  G+EVPY  GVP+ G    +   ++  + + S V++T+ +NFA++G
Sbjct:    20 KPAWSDAAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 73




GO:0004872 "receptor activity" evidence=IBA
GO:0005887 "integral to plasma membrane" evidence=IBA
GO:0007416 "synapse assembly" evidence=IBA
GO:0009986 "cell surface" evidence=IBA
GO:0042043 "neurexin family protein binding" evidence=IBA
GO:0045202 "synapse" evidence=IBA
GO:0004091 "carboxylesterase activity" evidence=IKR
UNIPROTKB|Q5XXC9 Q5XXC9 "NLGN4Y" [Pan troglodytes (taxid:9598)] Back     alignment and assigned GO terms
UNIPROTKB|F1NGC1 NLGN4X "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3X7N7 NLGN4Y "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-100309-2 nlgn4a "neuroligin 4a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0083963 CG34127 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|I3LVN7 NLGN3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q335 NLGN4X "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N0W4 NLGN4X "Neuroligin-4, X-linked" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NFZ3 NLGN4Y "Neuroligin-4, Y-linked" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query83
pfam00135510 pfam00135, COesterase, Carboxylesterase family 1e-04
>gnl|CDD|215741 pfam00135, COesterase, Carboxylesterase family Back     alignment and domain information
 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 26  KNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83
            N   P       G+++PY  G PL       K  Y+  E++ S  ++ + +NFA++G
Sbjct: 417 INKLWPPWMGVSHGDDLPYVFGNPLMR-----KLLYSEEEEILSRRMMGYWTNFAKTG 469


Length = 510

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 83
KOG4389|consensus601 99.84
cd00312493 Esterase_lipase Esterases and lipases (includes fu 99.73
PF00135535 COesterase: Carboxylesterase family The prints ent 99.67
COG2272491 PnbA Carboxylesterase type B [Lipid metabolism] 99.51
KOG1516|consensus545 98.6
>KOG4389|consensus Back     alignment and domain information
Probab=99.84  E-value=2.9e-21  Score=133.95  Aligned_cols=73  Identities=29%  Similarity=0.424  Sum_probs=64.2

Q ss_pred             hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956          2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR   81 (83)
Q Consensus         2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk   81 (83)
                      +.+.+..|+.||+|.|+|    +++....|+|+||.||.||-|+||.|+..     ..+++++|+.+|++||++|+||||
T Consensus       436 A~~~~~~g~~v~~YyFth----rsSa~pWP~WmGVmHGYEIEyvFG~PL~~-----s~nYt~~E~~ls~rim~~WanFAk  506 (601)
T KOG4389|consen  436 ADALAEQGASVYYYYFTH----RSSANPWPKWMGVMHGYEIEYVFGIPLNY-----SRNYTKEEKILSRRIMRYWANFAK  506 (601)
T ss_pred             HHHHHHhcCcEEEEEEec----cccCCCchhhhcCcccceEEEEecccccc-----cccccHHHHHHHHHHHHHHHHHhh
Confidence            456677888999999999    55555678999999999999999999862     468899999999999999999999


Q ss_pred             cC
Q psy13956         82 SG   83 (83)
Q Consensus        82 tG   83 (83)
                      ||
T Consensus       507 tG  508 (601)
T KOG4389|consen  507 TG  508 (601)
T ss_pred             cC
Confidence            98



>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc Back     alignment and domain information
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases Back     alignment and domain information
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism] Back     alignment and domain information
>KOG1516|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query83
3be8_A588 Crystal Structure Of The Synaptic Protein Neuroligi 7e-06
3b3q_A577 Crystal Structure Of A Synaptic Adhesion Complex Le 2e-05
3bl8_A580 Crystal Structure Of The Extracellular Domain Of Ne 2e-05
3biw_A574 Crystal Structure Of The Neuroligin-1NEUREXIN-1beta 2e-05
3vkf_A585 Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COM 2e-05
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4 Length = 588 Back     alignment and structure

Iteration: 1

Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 32/54 (59%) Query: 30 KPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83 KP S G+EVPY G+P+ G + ++ + + S V++T+ +NFA++G Sbjct: 450 KPSWADSAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTG 503
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex Length = 577 Back     alignment and structure
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of Neuroligin 2a From Mouse Length = 580 Back     alignment and structure
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta Synaptic Adhesion Complex Length = 574 Back     alignment and structure
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX Length = 585 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query83
3bix_A574 Neuroligin-1, neuroligin I; esterase domain, alpha 5e-09
1ea5_A537 ACHE, acetylcholinesterase; hydrolase, serine hydr 2e-06
1dx4_A585 ACHE, acetylcholinesterase; hydrolase, serine este 4e-06
2ha2_A543 ACHE, acetylcholinesterase; hydrolase fold, serine 5e-06
1p0i_A529 Cholinesterase; serine hydrolase, butyrate, hydrol 9e-06
2bce_A 579 Cholesterol esterase; hydrolase, serine esterase, 4e-05
2h7c_A542 Liver carboxylesterase 1; enzyme, cholesteryl este 5e-05
2fj0_A551 JuvenIle hormone esterase; manduca sexta, alpha-be 7e-04
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* Length = 574 Back     alignment and structure
 Score = 50.2 bits (120), Expect = 5e-09
 Identities = 16/45 (35%), Positives = 30/45 (66%)

Query: 39  GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83
           G+EVPY LG+P+ G    +   ++  + + S V++T+ +NFA++G
Sbjct: 456 GDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTG 500


>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... Length = 537 Back     alignment and structure
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* Length = 585 Back     alignment and structure
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... Length = 543 Back     alignment and structure
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... Length = 529 Back     alignment and structure
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A Length = 579 Back     alignment and structure
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* Length = 542 Back     alignment and structure
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} Length = 551 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query83
3bix_A574 Neuroligin-1, neuroligin I; esterase domain, alpha 99.82
1p0i_A529 Cholinesterase; serine hydrolase, butyrate, hydrol 99.8
1ea5_A537 ACHE, acetylcholinesterase; hydrolase, serine hydr 99.8
2ha2_A543 ACHE, acetylcholinesterase; hydrolase fold, serine 99.79
2h7c_A542 Liver carboxylesterase 1; enzyme, cholesteryl este 99.79
1dx4_A585 ACHE, acetylcholinesterase; hydrolase, serine este 99.78
2bce_A 579 Cholesterol esterase; hydrolase, serine esterase, 99.77
2fj0_A551 JuvenIle hormone esterase; manduca sexta, alpha-be 99.73
2ogt_A498 Thermostable carboxylesterase EST50; alpha/beta hy 99.72
1qe3_A489 PNB esterase, para-nitrobenzyl esterase; alpha-bet 99.71
1ukc_A522 ESTA, esterase; fungi, A/B hydrolase fold, acetylc 99.68
1thg_A544 Lipase; hydrolase(carboxylic esterase); HET: NAG N 99.54
1llf_A534 Lipase 3; candida cylindracea cholesterol esterase 99.45
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* Back     alignment and structure
Probab=99.82  E-value=3.2e-20  Score=130.70  Aligned_cols=77  Identities=26%  Similarity=0.543  Sum_probs=58.6

Q ss_pred             hHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhcc
Q psy13956          3 KAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARS   82 (83)
Q Consensus         3 ~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAkt   82 (83)
                      +++.+.+.|||+|+|+|...    ....+.+.||+|++||+||||.+...........++++|++|+++|+++|+||||+
T Consensus       424 ~~~~~~~~pvy~Y~F~~~~~----~~~~~~~~Ga~H~~el~yvFg~~~~~~~~~~~~~~~~~d~~ls~~m~~~W~nFAkt  499 (574)
T 3bix_A          424 DLHSNFGSPTYFYAFYHHCQ----TDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKT  499 (574)
T ss_dssp             HHHHHTTCCEEEEEECCCCC----CTTSCTTCCSCTTTTHHHHTTGGGGCCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCeEEEEEeccCC----cCCCCCCCCCcCccchHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHhCc
Confidence            45566678999999999432    12234578999999999999987543211123356899999999999999999999


Q ss_pred             C
Q psy13956         83 G   83 (83)
Q Consensus        83 G   83 (83)
                      |
T Consensus       500 G  500 (574)
T 3bix_A          500 G  500 (574)
T ss_dssp             S
T ss_pred             C
Confidence            7



>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... Back     alignment and structure
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... Back     alignment and structure
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... Back     alignment and structure
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* Back     alignment and structure
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* Back     alignment and structure
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A Back     alignment and structure
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} Back     alignment and structure
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A Back     alignment and structure
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A Back     alignment and structure
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 Back     alignment and structure
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 Back     alignment and structure
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 83
d1ukca_517 c.69.1.17 (A:) Esterase EstA {Aspergillus niger [T 5e-06
d2ha2a1542 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mu 2e-05
d1qe3a_483 c.69.1.1 (A:) Thermophilic para-nitrobenzyl estera 2e-05
d1ea5a_532 c.69.1.1 (A:) Acetylcholinesterase {Pacific electr 2e-05
d1dx4a_571 c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Dro 3e-05
d1p0ia_526 c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo 1e-04
d2bcea_ 579 c.69.1.1 (A:) Bile-salt activated lipase (choleste 2e-04
d2h7ca1532 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase 6e-04
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} Length = 517 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Esterase EstA
species: Aspergillus niger [TaxId: 5061]
 Score = 40.5 bits (93), Expect = 5e-06
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 39  GEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFARSG 83
             E+P   G    G LS   S Y T       V + +  +F ++ 
Sbjct: 420 TFELPAIFGAGSTGTLSSDSS-YLTYNAAIIPVTMHYFISFVQTL 463


>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} Length = 542 Back     information, alignment and structure
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} Length = 483 Back     information, alignment and structure
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} Length = 532 Back     information, alignment and structure
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 571 Back     information, alignment and structure
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} Length = 526 Back     information, alignment and structure
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} Length = 579 Back     information, alignment and structure
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} Length = 532 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query83
d1ea5a_532 Acetylcholinesterase {Pacific electric ray (Torped 99.82
d2h7ca1532 Mammalian carboxylesterase (liver carboxylesterase 99.82
d1p0ia_526 Butyryl cholinesterase {Human (Homo sapiens) [TaxI 99.81
d1dx4a_571 Acetylcholinesterase {Fruit fly (Drosophila melano 99.81
d2bcea_ 579 Bile-salt activated lipase (cholesterol esterase) 99.8
d2ha2a1542 Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 99.8
d1qe3a_483 Thermophilic para-nitrobenzyl esterase (PNB estera 99.75
d1ukca_517 Esterase EstA {Aspergillus niger [TaxId: 5061]} 99.71
d1thga_544 Type-B carboxylesterase/lipase {Fungus (Geotrichum 99.56
d1llfa_534 Type-B carboxylesterase/lipase {Candida cylindrace 99.27
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Acetylcholinesterase
species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=99.82  E-value=3.5e-21  Score=131.49  Aligned_cols=73  Identities=25%  Similarity=0.397  Sum_probs=59.0

Q ss_pred             hhHhhhcCCCeEEEEecCCCCcCcCCCCCCCCCCCCCCCCchhhcCCcCCCCCCCcCCCCCHHHHHHHHHHHHHHHhhhc
Q psy13956          2 LKAQKRLGSRTAVVDNNSNTEKRRKNTRKPKTDQSVSGEEVPYFLGVPLDGDLSYYKSKYTTREKLHSEVILTWVSNFAR   81 (83)
Q Consensus         2 ~~~~~~~~~~~y~Y~f~~~~~~~~~~~~~~~~~Ga~H~~dl~yvF~~~~~~~~~~~~~~~~~~d~~~s~~m~~~w~nFAk   81 (83)
                      ++++++.+.+||+|+|+|...    ....+.+.||+||+||+||||.+...     ...++++|+.|+++|+++|+||||
T Consensus       405 a~~~a~~~~~vy~Y~F~~~~~----~~~~~~~~Ga~H~~Dl~yvFg~~~~~-----~~~~t~~d~~ls~~m~~~w~nFak  475 (532)
T d1ea5a_         405 VNKYTKFGNGTYLYFFNHRAS----NLVWPEWMGVIHGYEIEFVFGLPLVK-----ELNYTAEEEALSRRIMHYWATFAK  475 (532)
T ss_dssp             HHHHHTTSSCEEEEEECCCCT----TCCSCGGGCSBTTTTHHHHTTGGGCG-----GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhcCCcceEEeccccc----cccCCCCCCccccchHHHHcCCcccC-----CCCCCHHHHHHHHHHHHHHHHHhC
Confidence            455666788999999999432    22335678999999999999987542     235699999999999999999999


Q ss_pred             cC
Q psy13956         82 SG   83 (83)
Q Consensus        82 tG   83 (83)
                      +|
T Consensus       476 tG  477 (532)
T d1ea5a_         476 TG  477 (532)
T ss_dssp             HS
T ss_pred             cC
Confidence            97



>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} Back     information, alignment and structure
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} Back     information, alignment and structure